Query 018008
Match_columns 362
No_of_seqs 370 out of 2057
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 05:20:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1552 Predicted alpha/beta h 100.0 5E-39 1.1E-43 273.8 20.4 237 1-249 1-240 (258)
2 PLN02385 hydrolase; alpha/beta 99.9 5.7E-25 1.2E-29 205.8 19.9 220 44-273 61-345 (349)
3 KOG4391 Predicted alpha/beta h 99.9 1.1E-25 2.4E-30 185.4 12.5 226 39-276 49-285 (300)
4 PLN02298 hydrolase, alpha/beta 99.9 5E-25 1.1E-29 204.7 18.1 221 43-273 31-317 (330)
5 PRK00870 haloalkane dehalogena 99.9 1.4E-24 3E-29 199.3 19.7 217 43-272 20-300 (302)
6 TIGR02240 PHA_depoly_arom poly 99.9 4.4E-25 9.5E-30 200.0 15.1 204 52-273 9-266 (276)
7 PHA02857 monoglyceride lipase; 99.9 4E-24 8.8E-29 193.6 17.7 210 49-272 5-272 (276)
8 PLN02824 hydrolase, alpha/beta 99.9 3.7E-24 8.1E-29 195.6 16.6 202 53-272 16-293 (294)
9 PLN02965 Probable pheophorbida 99.9 3.8E-24 8.1E-29 191.6 15.5 190 69-272 4-252 (255)
10 TIGR03343 biphenyl_bphD 2-hydr 99.9 4.6E-24 1E-28 193.6 16.3 195 62-271 24-281 (282)
11 PRK10749 lysophospholipase L2; 99.9 1.1E-23 2.4E-28 195.5 16.9 220 45-272 31-328 (330)
12 PRK13604 luxD acyl transferase 99.9 4.3E-23 9.4E-28 184.6 19.2 193 45-242 10-244 (307)
13 TIGR03056 bchO_mg_che_rel puta 99.9 4.9E-23 1.1E-27 186.1 19.6 202 53-271 14-278 (278)
14 KOG1455 Lysophospholipase [Lip 99.9 1.7E-23 3.6E-28 182.3 15.5 223 43-272 26-311 (313)
15 PRK03204 haloalkane dehalogena 99.9 4.8E-23 1E-27 187.5 19.2 215 36-270 6-285 (286)
16 PLN02679 hydrolase, alpha/beta 99.9 3.1E-23 6.8E-28 194.6 18.3 190 68-273 88-357 (360)
17 TIGR01250 pro_imino_pep_2 prol 99.9 3.8E-23 8.3E-28 186.8 17.5 205 52-271 9-288 (288)
18 TIGR03611 RutD pyrimidine util 99.9 1.3E-23 2.8E-28 186.9 14.2 190 66-271 11-256 (257)
19 PRK03592 haloalkane dehalogena 99.9 5.2E-23 1.1E-27 188.2 17.2 203 52-273 14-289 (295)
20 PLN03087 BODYGUARD 1 domain co 99.9 1E-22 2.2E-27 194.7 18.5 211 49-273 180-479 (481)
21 KOG1454 Predicted hydrolase/ac 99.9 3E-23 6.5E-28 190.4 14.3 217 43-273 24-324 (326)
22 KOG4178 Soluble epoxide hydrol 99.9 4.7E-22 1E-26 176.0 18.5 209 49-273 26-320 (322)
23 PRK10673 acyl-CoA esterase; Pr 99.9 1.4E-22 3.1E-27 181.0 15.5 189 66-272 14-254 (255)
24 KOG4409 Predicted hydrolase/ac 99.9 1.4E-22 2.9E-27 179.8 13.7 214 42-272 65-363 (365)
25 PLN02652 hydrolase; alpha/beta 99.9 7.1E-22 1.5E-26 186.4 19.3 215 44-272 110-386 (395)
26 PRK05077 frsA fermentation/res 99.9 5.9E-22 1.3E-26 188.3 18.7 216 42-272 166-411 (414)
27 PRK10349 carboxylesterase BioH 99.9 9E-23 1.9E-27 182.7 12.2 181 69-271 14-254 (256)
28 PRK06489 hypothetical protein; 99.9 2.2E-22 4.7E-27 189.1 14.3 191 68-273 69-357 (360)
29 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.7E-22 3.7E-27 178.5 12.8 188 67-271 12-251 (251)
30 PLN02578 hydrolase 99.9 7.6E-22 1.6E-26 185.0 16.9 199 52-271 73-353 (354)
31 COG2267 PldB Lysophospholipase 99.9 2.9E-21 6.3E-26 175.5 19.7 221 42-274 7-295 (298)
32 PLN02211 methyl indole-3-aceta 99.9 3.8E-21 8.1E-26 173.7 17.5 201 53-270 5-267 (273)
33 PLN02894 hydrolase, alpha/beta 99.9 5E-21 1.1E-25 181.8 18.1 201 56-272 93-384 (402)
34 PRK11126 2-succinyl-6-hydroxy- 99.9 1.1E-21 2.5E-26 173.8 12.4 180 68-272 2-241 (242)
35 TIGR03695 menH_SHCHC 2-succiny 99.9 2.8E-21 6E-26 170.4 14.1 187 68-271 1-251 (251)
36 PLN02511 hydrolase 99.9 7.4E-21 1.6E-25 179.9 17.2 215 43-271 70-363 (388)
37 PLN03084 alpha/beta hydrolase 99.9 7.1E-21 1.5E-25 178.6 16.9 202 52-271 112-382 (383)
38 TIGR01738 bioH putative pimelo 99.9 2.4E-21 5.2E-26 170.7 12.1 181 68-270 4-245 (245)
39 PF12697 Abhydrolase_6: Alpha/ 99.9 9.5E-22 2.1E-26 170.8 8.4 178 71-264 1-227 (228)
40 PF12695 Abhydrolase_5: Alpha/ 99.9 2.3E-20 4.9E-25 152.0 15.2 145 70-242 1-145 (145)
41 PRK14875 acetoin dehydrogenase 99.9 5.4E-21 1.2E-25 180.4 13.0 187 66-272 129-370 (371)
42 PRK10566 esterase; Provisional 99.9 2.3E-20 5E-25 166.4 16.3 194 67-271 26-246 (249)
43 TIGR01392 homoserO_Ac_trn homo 99.8 6.9E-21 1.5E-25 178.4 12.6 205 53-271 14-351 (351)
44 TIGR01607 PST-A Plasmodium sub 99.8 3.7E-20 8.1E-25 171.7 17.2 213 49-271 2-331 (332)
45 PRK07581 hypothetical protein; 99.8 6.7E-21 1.4E-25 177.7 11.9 192 67-272 40-335 (339)
46 PRK08775 homoserine O-acetyltr 99.8 8.9E-21 1.9E-25 177.1 12.5 202 53-273 44-339 (343)
47 COG1506 DAP2 Dipeptidyl aminop 99.8 5.3E-20 1.2E-24 183.7 16.6 226 40-273 361-616 (620)
48 PRK00175 metX homoserine O-ace 99.8 4.5E-20 9.7E-25 174.4 12.0 209 54-273 32-374 (379)
49 PRK10985 putative hydrolase; P 99.8 7.4E-19 1.6E-23 162.8 17.7 196 46-244 33-297 (324)
50 COG1647 Esterase/lipase [Gener 99.8 2.1E-19 4.5E-24 149.5 12.2 188 68-271 15-242 (243)
51 TIGR03100 hydr1_PEP hydrolase, 99.8 1.1E-18 2.5E-23 157.6 17.9 212 46-271 4-273 (274)
52 TIGR01249 pro_imino_pep_1 prol 99.8 6.7E-19 1.5E-23 161.9 15.5 122 47-173 7-130 (306)
53 PLN02980 2-oxoglutarate decarb 99.8 4.1E-19 9E-24 193.1 16.2 205 67-276 1370-1642(1655)
54 PRK11071 esterase YqiA; Provis 99.8 1.2E-18 2.6E-23 148.5 13.0 169 69-271 2-189 (190)
55 PRK05855 short chain dehydroge 99.8 1.1E-18 2.3E-23 174.3 13.7 208 50-274 8-293 (582)
56 PRK11460 putative hydrolase; P 99.8 1.8E-17 4E-22 145.8 15.5 179 66-271 14-210 (232)
57 PLN02872 triacylglycerol lipas 99.8 3.3E-18 7.1E-23 160.9 10.5 218 40-272 40-388 (395)
58 PF00326 Peptidase_S9: Prolyl 99.7 3.8E-18 8.2E-23 148.5 7.4 178 87-272 5-208 (213)
59 KOG2984 Predicted hydrolase [G 99.7 5.3E-18 1.1E-22 138.7 7.0 203 53-272 29-275 (277)
60 TIGR01840 esterase_phb esteras 99.7 1.4E-16 3.1E-21 138.5 14.9 164 66-229 11-196 (212)
61 PF05448 AXE1: Acetyl xylan es 99.7 7.6E-17 1.6E-21 147.6 13.4 199 41-241 53-302 (320)
62 KOG2564 Predicted acetyltransf 99.7 1.5E-16 3.2E-21 136.7 13.0 136 35-171 38-180 (343)
63 TIGR02821 fghA_ester_D S-formy 99.7 1.7E-15 3.7E-20 137.0 19.8 187 42-229 11-240 (275)
64 PRK10162 acetyl esterase; Prov 99.7 1E-15 2.2E-20 141.2 18.3 216 43-271 56-313 (318)
65 PF06342 DUF1057: Alpha/beta h 99.7 8.4E-16 1.8E-20 133.4 16.0 220 46-268 8-294 (297)
66 PLN00021 chlorophyllase 99.7 3E-15 6.5E-20 136.9 20.5 173 66-248 50-246 (313)
67 KOG2382 Predicted alpha/beta h 99.7 2.6E-16 5.6E-21 139.7 12.7 193 66-273 50-313 (315)
68 COG0429 Predicted hydrolase of 99.7 1E-15 2.2E-20 135.6 16.2 202 43-246 48-319 (345)
69 PF01738 DLH: Dienelactone hyd 99.7 3.5E-16 7.6E-21 136.6 12.2 187 67-272 13-216 (218)
70 TIGR03101 hydr2_PEP hydrolase, 99.7 1.4E-15 3.1E-20 135.5 15.6 127 47-177 3-138 (266)
71 COG3458 Acetyl esterase (deace 99.7 5.1E-16 1.1E-20 132.9 12.1 197 43-241 55-299 (321)
72 PF00561 Abhydrolase_1: alpha/ 99.7 3.7E-17 8E-22 143.0 5.4 156 97-266 1-228 (230)
73 PRK10115 protease 2; Provision 99.7 3.2E-15 7E-20 150.5 19.0 189 41-230 413-635 (686)
74 PLN02442 S-formylglutathione h 99.7 9.7E-15 2.1E-19 132.5 20.2 187 41-229 15-246 (283)
75 TIGR01836 PHA_synth_III_C poly 99.7 1E-15 2.2E-20 143.4 13.5 104 68-174 62-172 (350)
76 PF06500 DUF1100: Alpha/beta h 99.6 6.7E-15 1.5E-19 136.0 16.0 187 41-228 162-379 (411)
77 PRK06765 homoserine O-acetyltr 99.6 1.3E-15 2.9E-20 143.4 11.6 196 67-272 55-387 (389)
78 COG2945 Predicted hydrolase of 99.6 7.2E-15 1.6E-19 119.9 12.9 195 44-271 4-205 (210)
79 PF02230 Abhydrolase_2: Phosph 99.6 1E-14 2.3E-19 127.1 14.8 183 63-271 9-213 (216)
80 KOG4667 Predicted esterase [Li 99.6 2.8E-14 6.1E-19 118.2 15.8 192 45-242 11-239 (269)
81 KOG1838 Alpha/beta hydrolase [ 99.6 4.3E-14 9.2E-19 129.8 18.6 132 40-173 89-236 (409)
82 TIGR01838 PHA_synth_I poly(R)- 99.6 3.2E-14 7E-19 137.8 17.8 188 58-248 175-461 (532)
83 COG0412 Dienelactone hydrolase 99.6 1.1E-13 2.3E-18 121.7 19.5 182 45-244 3-204 (236)
84 KOG2931 Differentiation-relate 99.6 2E-13 4.4E-18 118.5 16.3 213 44-272 22-305 (326)
85 COG0596 MhpC Predicted hydrola 99.5 4.5E-13 9.7E-18 118.0 17.0 187 68-270 21-279 (282)
86 COG0400 Predicted esterase [Ge 99.5 1.3E-13 2.9E-18 117.5 12.4 145 65-229 15-174 (207)
87 PF03096 Ndr: Ndr family; Int 99.5 9.5E-14 2.1E-18 122.2 9.5 210 47-272 2-278 (283)
88 COG0657 Aes Esterase/lipase [L 99.5 1.6E-12 3.4E-17 119.9 18.0 168 67-241 78-286 (312)
89 TIGR00976 /NonD putative hydro 99.5 9.5E-13 2.1E-17 130.4 17.3 125 49-174 1-133 (550)
90 PF10503 Esterase_phd: Esteras 99.5 1.2E-12 2.7E-17 112.8 15.7 161 67-229 15-197 (220)
91 PF07859 Abhydrolase_3: alpha/ 99.5 3.1E-13 6.8E-18 117.2 11.3 164 71-241 1-207 (211)
92 KOG1515 Arylacetamide deacetyl 99.5 4.4E-12 9.5E-17 115.9 18.3 216 44-271 61-333 (336)
93 PF06821 Ser_hydrolase: Serine 99.5 9.5E-13 2.1E-17 109.7 12.1 151 71-243 1-154 (171)
94 PF12715 Abhydrolase_7: Abhydr 99.4 3.6E-13 7.9E-18 122.6 9.1 185 42-229 86-332 (390)
95 PRK07868 acyl-CoA synthetase; 99.4 2.3E-12 4.9E-17 136.0 16.2 195 67-276 66-364 (994)
96 COG3208 GrsT Predicted thioest 99.4 1.5E-12 3.2E-17 111.2 11.4 188 65-271 4-234 (244)
97 PF12740 Chlorophyllase2: Chlo 99.4 3E-11 6.5E-16 105.6 18.4 172 64-245 13-208 (259)
98 TIGR03230 lipo_lipase lipoprot 99.4 4.7E-12 1E-16 119.6 13.7 109 66-174 39-155 (442)
99 KOG2100 Dipeptidyl aminopeptid 99.4 6E-12 1.3E-16 127.5 15.3 219 43-271 497-745 (755)
100 COG3571 Predicted hydrolase of 99.4 1.4E-11 3.1E-16 97.5 13.9 189 67-270 13-208 (213)
101 KOG3043 Predicted hydrolase re 99.4 3.7E-12 8E-17 106.7 10.4 155 57-231 28-194 (242)
102 cd00707 Pancreat_lipase_like P 99.4 3.4E-12 7.4E-17 115.1 11.0 109 66-175 34-149 (275)
103 PF02129 Peptidase_S15: X-Pro 99.4 6.6E-12 1.4E-16 113.4 12.8 122 53-175 1-138 (272)
104 KOG2281 Dipeptidyl aminopeptid 99.4 2E-11 4.2E-16 115.9 16.0 218 45-271 614-865 (867)
105 KOG1553 Predicted alpha/beta h 99.4 1E-12 2.2E-17 116.2 6.3 174 42-218 212-400 (517)
106 PF08538 DUF1749: Protein of u 99.3 5.3E-11 1.1E-15 106.0 13.5 108 67-174 32-149 (303)
107 COG4757 Predicted alpha/beta h 99.3 1.4E-11 3E-16 103.6 8.5 180 47-229 8-244 (281)
108 PF05728 UPF0227: Uncharacteri 99.3 6.6E-11 1.4E-15 99.8 12.7 151 71-241 2-170 (187)
109 KOG4627 Kynurenine formamidase 99.3 2.9E-11 6.2E-16 99.8 9.5 187 54-258 54-252 (270)
110 TIGR01839 PHA_synth_II poly(R) 99.2 2.9E-10 6.3E-15 109.5 16.8 179 67-248 214-487 (560)
111 PRK05371 x-prolyl-dipeptidyl a 99.2 7.4E-11 1.6E-15 120.0 13.6 143 87-229 270-483 (767)
112 KOG2624 Triglyceride lipase-ch 99.2 1.2E-10 2.6E-15 108.6 13.6 133 39-173 43-199 (403)
113 PF07224 Chlorophyllase: Chlor 99.2 5.8E-10 1.3E-14 95.8 15.6 154 65-230 43-218 (307)
114 COG3509 LpqC Poly(3-hydroxybut 99.2 5.5E-10 1.2E-14 97.8 15.2 175 53-229 43-236 (312)
115 PF12146 Hydrolase_4: Putative 99.2 1.1E-10 2.3E-15 84.1 8.9 77 54-131 1-78 (79)
116 PF02273 Acyl_transf_2: Acyl t 99.2 6.5E-10 1.4E-14 94.5 14.2 190 47-241 5-236 (294)
117 PF05677 DUF818: Chlamydia CHL 99.2 5.8E-10 1.3E-14 99.7 14.5 168 43-211 111-300 (365)
118 PF06028 DUF915: Alpha/beta hy 99.1 1.3E-10 2.7E-15 102.7 8.2 191 67-270 10-252 (255)
119 COG4099 Predicted peptidase [G 99.1 7.6E-10 1.7E-14 96.4 12.6 160 51-229 168-343 (387)
120 COG2021 MET2 Homoserine acetyl 99.1 4.4E-10 9.5E-15 101.7 11.0 194 66-271 49-366 (368)
121 PF03959 FSH1: Serine hydrolas 99.1 6.8E-10 1.5E-14 96.3 11.6 152 67-230 3-190 (212)
122 TIGR03502 lipase_Pla1_cef extr 99.1 6.1E-10 1.3E-14 111.6 12.0 111 48-159 421-575 (792)
123 PF10230 DUF2305: Uncharacteri 99.1 5.7E-09 1.2E-13 93.6 15.9 107 68-174 2-123 (266)
124 COG3545 Predicted esterase of 99.1 6.5E-09 1.4E-13 84.4 14.2 153 69-243 3-157 (181)
125 PF07819 PGAP1: PGAP1-like pro 99.0 2.4E-09 5.2E-14 93.5 12.0 150 67-218 3-175 (225)
126 PF03403 PAF-AH_p_II: Platelet 99.0 1.6E-09 3.4E-14 101.8 11.3 162 66-246 98-319 (379)
127 KOG2551 Phospholipase/carboxyh 99.0 1.4E-09 2.9E-14 91.5 9.5 178 67-272 4-219 (230)
128 KOG2112 Lysophospholipase [Lip 99.0 2.7E-09 5.8E-14 89.1 10.6 170 68-258 3-193 (206)
129 PF00975 Thioesterase: Thioest 99.0 1.7E-09 3.7E-14 94.9 9.6 99 69-173 1-104 (229)
130 PF08840 BAAT_C: BAAT / Acyl-C 99.0 2E-09 4.3E-14 93.4 8.5 122 121-242 4-162 (213)
131 PF06057 VirJ: Bacterial virul 98.9 9.9E-09 2.2E-13 85.2 11.1 138 69-214 3-152 (192)
132 KOG2237 Predicted serine prote 98.9 5.8E-09 1.3E-13 99.7 10.7 188 41-229 438-660 (712)
133 TIGR01849 PHB_depoly_PhaZ poly 98.9 5.7E-08 1.2E-12 91.1 15.9 101 69-174 103-209 (406)
134 COG4188 Predicted dienelactone 98.9 1.9E-08 4.2E-13 91.4 12.1 179 67-247 70-299 (365)
135 PF10340 DUF2424: Protein of u 98.8 1.6E-07 3.5E-12 86.5 16.5 106 67-176 121-238 (374)
136 PTZ00472 serine carboxypeptida 98.8 8.2E-08 1.8E-12 92.7 15.1 120 54-174 60-217 (462)
137 COG2936 Predicted acyl esteras 98.8 1.1E-07 2.3E-12 91.7 15.5 132 42-174 17-160 (563)
138 COG1505 Serine proteases of th 98.8 3.5E-08 7.5E-13 94.1 12.0 189 41-230 391-609 (648)
139 PF09752 DUF2048: Uncharacteri 98.8 1.2E-07 2.7E-12 85.9 14.9 173 67-246 91-332 (348)
140 PRK04940 hypothetical protein; 98.8 6.3E-08 1.4E-12 80.2 11.5 97 139-241 60-161 (180)
141 COG1770 PtrB Protease II [Amin 98.7 2.1E-07 4.6E-12 89.9 14.3 189 40-229 415-637 (682)
142 PF00151 Lipase: Lipase; Inte 98.7 2.7E-08 5.9E-13 91.7 7.9 110 66-176 69-190 (331)
143 COG3243 PhaC Poly(3-hydroxyalk 98.7 1E-07 2.3E-12 87.6 11.1 177 68-247 107-375 (445)
144 PRK10439 enterobactin/ferric e 98.7 1.3E-06 2.7E-11 83.2 18.7 182 45-230 181-377 (411)
145 COG4814 Uncharacterized protei 98.7 5E-07 1.1E-11 77.5 13.0 191 69-271 46-285 (288)
146 KOG3847 Phospholipase A2 (plat 98.7 3.8E-07 8.3E-12 80.4 12.1 163 67-248 117-334 (399)
147 PF05990 DUF900: Alpha/beta hy 98.6 3.6E-07 7.8E-12 80.3 11.6 137 66-216 16-168 (233)
148 KOG3975 Uncharacterized conser 98.6 1.3E-06 2.8E-11 74.7 13.2 109 64-173 25-147 (301)
149 KOG2565 Predicted hydrolases o 98.6 2.9E-07 6.4E-12 82.9 9.1 114 53-168 132-259 (469)
150 PF11144 DUF2920: Protein of u 98.5 8E-06 1.7E-10 75.7 16.8 225 48-272 13-367 (403)
151 PF03583 LIP: Secretory lipase 98.5 1.9E-06 4.1E-11 78.4 12.6 86 87-173 18-113 (290)
152 PF00756 Esterase: Putative es 98.5 7.4E-07 1.6E-11 79.3 9.1 150 66-215 22-197 (251)
153 PF01674 Lipase_2: Lipase (cla 98.4 3.4E-07 7.3E-12 79.1 5.7 88 69-160 2-96 (219)
154 KOG3101 Esterase D [General fu 98.4 1E-06 2.2E-11 73.5 8.1 170 58-228 30-243 (283)
155 PLN02733 phosphatidylcholine-s 98.4 1.1E-06 2.3E-11 83.9 9.3 91 82-176 108-204 (440)
156 cd00312 Esterase_lipase Estera 98.4 1.6E-06 3.5E-11 85.2 10.8 108 66-173 93-213 (493)
157 KOG3253 Predicted alpha/beta h 98.4 1.7E-06 3.7E-11 82.5 8.9 162 67-243 175-346 (784)
158 PF12048 DUF3530: Protein of u 98.3 2.6E-05 5.7E-10 71.4 15.8 152 46-212 64-257 (310)
159 PRK10252 entF enterobactin syn 98.3 6.6E-06 1.4E-10 90.2 13.7 100 67-172 1067-1170(1296)
160 COG2272 PnbA Carboxylesterase 98.3 5.8E-06 1.2E-10 78.0 11.3 107 66-173 92-217 (491)
161 COG3150 Predicted esterase [Ge 98.2 1.8E-05 4E-10 63.7 10.9 153 71-241 2-170 (191)
162 PF00135 COesterase: Carboxyle 98.2 4.8E-06 1E-10 82.5 9.3 105 67-171 124-243 (535)
163 PF11339 DUF3141: Protein of u 98.2 2.6E-05 5.6E-10 73.9 13.1 118 37-170 44-172 (581)
164 COG3319 Thioesterase domains o 98.2 1E-05 2.3E-10 71.4 9.5 99 69-174 1-104 (257)
165 PF05577 Peptidase_S28: Serine 98.1 1.8E-05 3.9E-10 76.4 10.7 108 67-174 28-149 (434)
166 COG1073 Hydrolases of the alph 98.1 6.5E-07 1.4E-11 81.1 0.3 176 69-244 89-276 (299)
167 PF05705 DUF829: Eukaryotic pr 98.1 5E-05 1.1E-09 67.2 11.6 188 70-270 1-240 (240)
168 KOG2183 Prolylcarboxypeptidase 98.1 3.3E-05 7.1E-10 71.0 10.2 105 69-173 81-203 (492)
169 KOG3724 Negative regulator of 98.0 2.4E-05 5.1E-10 77.1 8.9 147 67-218 88-274 (973)
170 COG4782 Uncharacterized protei 97.9 7E-05 1.5E-09 68.1 10.1 107 66-174 114-235 (377)
171 PF05057 DUF676: Putative seri 97.9 3.4E-05 7.4E-10 67.1 8.0 88 67-158 3-97 (217)
172 COG2382 Fes Enterochelin ester 97.9 0.00028 6.1E-09 62.8 13.4 108 67-174 97-213 (299)
173 KOG4840 Predicted hydrolases o 97.9 0.0003 6.5E-09 59.5 12.4 107 67-175 35-146 (299)
174 COG2819 Predicted hydrolase of 97.9 0.001 2.2E-08 58.5 16.1 49 125-173 123-172 (264)
175 COG1075 LipA Predicted acetylt 97.8 7.1E-05 1.5E-09 69.5 8.3 103 67-175 58-166 (336)
176 COG0627 Predicted esterase [Ge 97.8 0.00021 4.5E-09 65.3 10.5 110 67-176 53-190 (316)
177 PF10142 PhoPQ_related: PhoPQ- 97.6 0.0016 3.4E-08 60.7 13.8 108 134-241 167-302 (367)
178 KOG4388 Hormone-sensitive lipa 97.5 0.00022 4.7E-09 68.3 6.4 111 57-171 385-506 (880)
179 COG3946 VirJ Type IV secretory 97.5 0.0013 2.8E-08 60.7 11.2 90 67-161 259-348 (456)
180 PF00450 Peptidase_S10: Serine 97.3 0.003 6.4E-08 60.6 12.5 126 48-174 17-182 (415)
181 PF04083 Abhydro_lipase: Parti 97.3 0.00065 1.4E-08 46.2 5.5 45 40-84 8-59 (63)
182 PF07082 DUF1350: Protein of u 97.3 0.0046 9.9E-08 53.9 11.9 108 60-170 9-122 (250)
183 smart00824 PKS_TE Thioesterase 97.3 0.0016 3.4E-08 55.6 9.0 87 79-172 10-101 (212)
184 PF04301 DUF452: Protein of un 97.2 0.0021 4.5E-08 55.1 9.0 79 67-171 10-88 (213)
185 KOG1516 Carboxylesterase and r 97.2 0.0011 2.4E-08 66.1 7.9 103 68-171 112-230 (545)
186 KOG2182 Hydrolytic enzymes of 97.1 0.0052 1.1E-07 58.3 10.4 107 66-172 84-206 (514)
187 PF02450 LCAT: Lecithin:choles 97.0 0.0029 6.2E-08 60.2 8.8 84 83-175 66-162 (389)
188 KOG1551 Uncharacterized conser 97.0 0.00099 2.1E-08 57.9 4.9 199 59-271 105-364 (371)
189 KOG3967 Uncharacterized conser 96.8 0.023 5E-07 48.0 11.0 103 67-172 100-226 (297)
190 cd00741 Lipase Lipase. Lipase 96.7 0.0084 1.8E-07 48.9 7.8 81 122-216 13-98 (153)
191 PF02089 Palm_thioest: Palmito 96.6 0.0049 1.1E-07 55.0 6.3 106 66-173 3-116 (279)
192 KOG1282 Serine carboxypeptidas 96.6 0.043 9.4E-07 52.6 12.8 128 47-175 49-215 (454)
193 KOG2521 Uncharacterized conser 96.6 0.012 2.5E-07 54.3 8.6 202 67-276 37-293 (350)
194 PLN02606 palmitoyl-protein thi 96.5 0.027 5.8E-07 50.8 10.0 101 67-173 25-132 (306)
195 TIGR03712 acc_sec_asp2 accesso 96.5 0.027 5.8E-07 53.6 10.3 119 50-174 271-391 (511)
196 PLN02209 serine carboxypeptida 96.5 0.04 8.8E-07 53.0 11.8 128 46-174 43-213 (437)
197 PLN03016 sinapoylglucose-malat 96.4 0.044 9.4E-07 52.7 12.0 125 49-174 44-211 (433)
198 PF11288 DUF3089: Protein of u 96.4 0.0066 1.4E-07 51.8 5.6 41 119-160 76-116 (207)
199 PF01764 Lipase_3: Lipase (cla 96.4 0.0078 1.7E-07 48.1 5.5 51 121-173 48-106 (140)
200 KOG2541 Palmitoyl protein thio 96.3 0.061 1.3E-06 47.2 10.7 99 69-173 24-128 (296)
201 cd00519 Lipase_3 Lipase (class 96.0 0.064 1.4E-06 46.9 10.1 50 122-173 113-168 (229)
202 PLN02633 palmitoyl protein thi 96.0 0.077 1.7E-06 48.0 10.4 102 67-173 24-131 (314)
203 PF08386 Abhydrolase_4: TAP-li 95.9 0.007 1.5E-07 45.9 3.0 42 201-243 34-75 (103)
204 PF11187 DUF2974: Protein of u 95.7 0.026 5.6E-07 49.2 6.1 48 121-171 69-121 (224)
205 PLN02517 phosphatidylcholine-s 95.6 0.035 7.7E-07 54.4 7.2 86 84-174 158-264 (642)
206 PF01083 Cutinase: Cutinase; 95.5 0.064 1.4E-06 45.1 7.4 101 96-216 39-150 (179)
207 PF06259 Abhydrolase_8: Alpha/ 95.3 0.37 8E-06 40.2 11.3 50 121-171 92-142 (177)
208 PLN02454 triacylglycerol lipas 95.2 0.047 1E-06 51.5 6.4 54 121-174 210-272 (414)
209 PLN02408 phospholipase A1 94.5 0.054 1.2E-06 50.4 4.8 39 121-159 182-220 (365)
210 KOG2369 Lecithin:cholesterol a 94.5 0.093 2E-06 49.8 6.4 84 83-171 125-223 (473)
211 PLN02571 triacylglycerol lipas 94.1 0.076 1.6E-06 50.2 4.9 39 121-159 208-246 (413)
212 PLN02324 triacylglycerol lipas 93.6 0.098 2.1E-06 49.4 4.6 39 121-159 197-235 (415)
213 PLN00413 triacylglycerol lipas 93.5 0.12 2.6E-06 49.5 5.0 36 121-158 268-303 (479)
214 PLN02162 triacylglycerol lipas 93.3 0.13 2.8E-06 49.1 4.9 37 120-158 261-297 (475)
215 PF07519 Tannase: Tannase and 93.3 1.6 3.5E-05 42.6 12.6 81 93-174 56-151 (474)
216 PLN02934 triacylglycerol lipas 93.3 0.13 2.8E-06 49.6 4.9 37 120-158 304-340 (515)
217 PLN02802 triacylglycerol lipas 93.3 0.12 2.7E-06 49.7 4.8 38 122-159 313-350 (509)
218 PF05576 Peptidase_S37: PS-10 93.2 0.21 4.6E-06 46.8 6.1 102 63-170 58-166 (448)
219 COG2939 Carboxypeptidase C (ca 92.9 0.29 6.3E-06 47.0 6.6 110 67-177 100-240 (498)
220 PLN02753 triacylglycerol lipas 92.3 0.2 4.3E-06 48.6 4.7 38 121-158 291-331 (531)
221 PLN02310 triacylglycerol lipas 92.2 0.21 4.6E-06 47.1 4.7 39 121-159 189-229 (405)
222 PLN02761 lipase class 3 family 92.1 0.22 4.8E-06 48.2 4.7 39 121-159 272-314 (527)
223 PLN02213 sinapoylglucose-malat 92.0 0.84 1.8E-05 42.2 8.4 77 98-174 3-97 (319)
224 PF06441 EHN: Epoxide hydrolas 91.3 0.48 1E-05 36.3 5.0 37 52-88 75-112 (112)
225 PLN02719 triacylglycerol lipas 91.1 0.31 6.7E-06 47.1 4.6 39 121-159 277-318 (518)
226 PLN03037 lipase class 3 family 91.0 0.32 7E-06 47.1 4.6 38 122-159 299-338 (525)
227 COG4287 PqaA PhoPQ-activated p 90.6 0.32 6.9E-06 44.8 3.9 111 131-243 228-371 (507)
228 COG4947 Uncharacterized protei 90.4 1.4 3.1E-05 36.2 7.1 102 122-229 86-199 (227)
229 KOG1202 Animal-type fatty acid 89.9 1.4 3E-05 46.8 8.2 94 66-171 2121-2217(2376)
230 PLN02847 triacylglycerol lipas 89.9 0.5 1.1E-05 46.5 4.9 21 139-159 251-271 (633)
231 COG3673 Uncharacterized conser 89.3 4.9 0.00011 36.6 10.2 93 66-159 29-142 (423)
232 KOG4372 Predicted alpha/beta h 89.2 0.66 1.4E-05 43.4 5.0 90 66-158 78-169 (405)
233 COG5153 CVT17 Putative lipase 89.1 0.93 2E-05 40.3 5.5 50 119-171 258-307 (425)
234 KOG4540 Putative lipase essent 89.1 0.93 2E-05 40.3 5.5 50 119-171 258-307 (425)
235 PF08237 PE-PPE: PE-PPE domain 88.3 2.4 5.3E-05 36.9 7.7 64 96-159 2-68 (225)
236 KOG4389 Acetylcholinesterase/B 87.5 1.9 4.2E-05 41.4 6.8 104 66-171 133-253 (601)
237 KOG4569 Predicted lipase [Lipi 86.7 0.92 2E-05 42.2 4.3 37 121-159 155-191 (336)
238 PF09994 DUF2235: Uncharacteri 86.3 5.3 0.00011 36.1 9.0 40 120-160 74-113 (277)
239 PF05277 DUF726: Protein of un 85.1 2.5 5.4E-05 39.3 6.3 63 139-214 220-288 (345)
240 PF03283 PAE: Pectinacetyleste 83.6 4.9 0.00011 37.8 7.6 38 120-158 137-175 (361)
241 COG2830 Uncharacterized protei 81.8 5 0.00011 32.7 5.9 78 67-170 10-87 (214)
242 PF00450 Peptidase_S10: Serine 76.0 0.94 2E-05 43.2 0.3 71 201-271 330-414 (415)
243 KOG2029 Uncharacterized conser 75.0 11 0.00024 37.3 7.1 35 124-159 511-546 (697)
244 PLN02213 sinapoylglucose-malat 75.0 2.7 5.8E-05 38.8 3.0 71 201-272 233-316 (319)
245 KOG1283 Serine carboxypeptidas 71.3 26 0.00056 32.1 8.0 109 67-177 30-170 (414)
246 PF09949 DUF2183: Uncharacteri 69.0 42 0.00092 25.1 7.7 86 81-168 9-97 (100)
247 PF07519 Tannase: Tannase and 66.3 6.4 0.00014 38.5 3.6 69 199-276 351-430 (474)
248 PLN02209 serine carboxypeptida 66.3 6.2 0.00013 38.1 3.5 71 201-272 351-434 (437)
249 PRK05282 (alpha)-aspartyl dipe 63.8 25 0.00054 30.8 6.5 39 67-105 30-70 (233)
250 PLN03016 sinapoylglucose-malat 63.7 8.2 0.00018 37.3 3.8 71 201-272 347-430 (433)
251 KOG1282 Serine carboxypeptidas 60.7 8.2 0.00018 37.4 3.1 73 202-274 364-449 (454)
252 PRK02399 hypothetical protein; 54.5 1.5E+02 0.0033 28.3 10.2 95 72-168 6-127 (406)
253 PF06792 UPF0261: Uncharacteri 53.8 1.5E+02 0.0031 28.4 10.0 95 72-168 4-125 (403)
254 COG3340 PepE Peptidase E [Amin 53.6 49 0.0011 28.5 6.2 39 67-105 31-71 (224)
255 TIGR02069 cyanophycinase cyano 53.3 71 0.0015 28.3 7.7 40 66-105 26-66 (250)
256 COG0552 FtsY Signal recognitio 52.3 1.2E+02 0.0025 28.2 8.9 87 77-168 202-291 (340)
257 COG1073 Hydrolases of the alph 49.2 64 0.0014 28.3 7.0 94 67-161 48-154 (299)
258 smart00827 PKS_AT Acyl transfe 47.8 25 0.00054 31.8 4.0 29 129-159 74-102 (298)
259 PF00326 Peptidase_S9: Prolyl 44.7 66 0.0014 27.2 6.0 66 67-135 143-211 (213)
260 PF00698 Acyl_transf_1: Acyl t 43.8 17 0.00036 33.5 2.2 32 126-159 73-104 (318)
261 PF06850 PHB_depo_C: PHB de-po 43.2 33 0.00072 29.1 3.7 41 201-241 134-178 (202)
262 cd03146 GAT1_Peptidase_E Type 42.7 1E+02 0.0022 26.4 6.8 39 67-105 30-69 (212)
263 TIGR03131 malonate_mdcH malona 42.3 34 0.00073 31.0 4.0 32 127-160 66-97 (295)
264 cd07198 Patatin Patatin-like p 41.3 35 0.00077 28.0 3.7 35 124-161 14-48 (172)
265 KOG2872 Uroporphyrinogen decar 40.3 93 0.002 28.1 6.1 72 67-147 251-336 (359)
266 PF10081 Abhydrolase_9: Alpha/ 39.5 1.9E+02 0.0042 26.1 8.0 35 139-173 109-147 (289)
267 COG2240 PdxK Pyridoxal/pyridox 38.5 3E+02 0.0065 24.9 9.5 96 74-177 11-117 (281)
268 PF06309 Torsin: Torsin; Inte 38.3 41 0.00088 26.4 3.2 33 64-96 48-81 (127)
269 TIGR00128 fabD malonyl CoA-acy 38.2 40 0.00086 30.3 3.8 27 132-160 77-104 (290)
270 KOG0781 Signal recognition par 37.8 96 0.0021 30.3 6.1 86 72-168 442-537 (587)
271 cd07224 Pat_like Patatin-like 36.3 49 0.0011 28.9 3.9 37 124-161 15-51 (233)
272 KOG2805 tRNA (5-methylaminomet 36.2 1.2E+02 0.0026 27.9 6.1 36 67-107 5-40 (377)
273 cd03129 GAT1_Peptidase_E_like 35.2 1.9E+02 0.0041 24.6 7.4 87 67-156 28-130 (210)
274 PF12242 Eno-Rase_NADH_b: NAD( 34.7 78 0.0017 22.4 3.8 43 118-160 18-61 (78)
275 cd07207 Pat_ExoU_VipD_like Exo 34.4 57 0.0012 27.2 3.9 35 124-161 15-49 (194)
276 KOG2385 Uncharacterized conser 34.3 1.1E+02 0.0023 30.2 5.9 36 139-174 447-488 (633)
277 cd07210 Pat_hypo_W_succinogene 34.0 56 0.0012 28.3 3.9 34 125-161 17-50 (221)
278 TIGR02816 pfaB_fam PfaB family 32.1 54 0.0012 32.7 3.8 27 132-160 260-286 (538)
279 cd07212 Pat_PNPLA9 Patatin-lik 31.8 69 0.0015 29.4 4.3 37 125-161 16-54 (312)
280 COG4822 CbiK Cobalamin biosynt 30.3 1.2E+02 0.0025 26.2 4.9 54 67-133 137-191 (265)
281 COG0541 Ffh Signal recognition 30.0 5.2E+02 0.011 25.1 9.6 81 78-169 164-247 (451)
282 COG5441 Uncharacterized conser 29.9 3.6E+02 0.0078 24.7 8.1 90 70-161 3-115 (401)
283 PF10605 3HBOH: 3HB-oligomer h 29.3 46 0.001 33.3 2.7 52 201-252 555-614 (690)
284 cd07209 Pat_hypo_Ecoli_Z1214_l 28.6 69 0.0015 27.5 3.5 34 125-161 15-48 (215)
285 cd07228 Pat_NTE_like_bacteria 28.0 82 0.0018 25.9 3.8 35 124-161 16-50 (175)
286 cd07225 Pat_PNPLA6_PNPLA7 Pata 27.5 78 0.0017 29.0 3.8 33 125-160 32-64 (306)
287 COG1506 DAP2 Dipeptidyl aminop 27.2 2.1E+02 0.0045 29.2 7.2 67 67-135 550-618 (620)
288 COG0331 FabD (acyl-carrier-pro 27.1 68 0.0015 29.5 3.3 32 125-158 72-104 (310)
289 KOG0835 Cyclin L [General func 26.9 87 0.0019 28.8 3.8 10 90-99 127-136 (367)
290 cd03145 GAT1_cyanophycinase Ty 26.9 1.8E+02 0.004 25.0 5.9 39 67-105 28-67 (217)
291 PF10686 DUF2493: Protein of u 26.6 68 0.0015 22.2 2.5 32 68-102 31-63 (71)
292 KOG0094 GTPase Rab6/YPT6/Ryh1, 25.7 2.1E+02 0.0045 24.5 5.5 56 81-146 81-136 (221)
293 PRK10279 hypothetical protein; 25.5 81 0.0018 28.8 3.5 34 124-160 21-54 (300)
294 COG4553 DepA Poly-beta-hydroxy 24.8 5.5E+02 0.012 23.6 11.2 102 67-174 102-210 (415)
295 cd01714 ETF_beta The electron 24.0 4.1E+02 0.0089 22.5 7.4 66 93-169 73-145 (202)
296 cd07227 Pat_Fungal_NTE1 Fungal 22.9 1E+02 0.0022 27.7 3.6 34 124-160 26-59 (269)
297 PF08484 Methyltransf_14: C-me 22.5 1.7E+02 0.0037 23.9 4.6 38 137-174 67-105 (160)
298 KOG1752 Glutaredoxin and relat 21.5 3.1E+02 0.0068 20.6 5.4 76 67-160 13-90 (104)
299 COG0529 CysC Adenylylsulfate k 21.5 5E+02 0.011 21.9 8.8 39 66-104 20-59 (197)
300 PF03575 Peptidase_S51: Peptid 21.3 1.5E+02 0.0033 23.8 4.1 21 85-105 2-22 (154)
301 PRK05579 bifunctional phosphop 21.1 5.5E+02 0.012 24.6 8.3 59 84-146 135-196 (399)
302 PF09419 PGP_phosphatase: Mito 21.1 2.8E+02 0.0062 22.9 5.6 53 92-149 36-88 (168)
303 PF03796 DnaB_C: DnaB-like hel 20.9 5.7E+02 0.012 22.4 8.7 72 72-146 105-178 (259)
304 cd07230 Pat_TGL4-5_like Triacy 20.9 94 0.002 30.0 3.1 35 124-161 89-123 (421)
305 PF11713 Peptidase_C80: Peptid 20.8 69 0.0015 26.1 1.9 50 102-151 59-116 (157)
306 cd07218 Pat_iPLA2 Calcium-inde 20.2 1.5E+02 0.0033 26.1 4.1 37 124-161 16-52 (245)
307 cd07208 Pat_hypo_Ecoli_yjju_li 20.1 1.3E+02 0.0028 26.7 3.7 36 124-161 14-49 (266)
No 1
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=5e-39 Score=273.76 Aligned_cols=237 Identities=60% Similarity=1.061 Sum_probs=213.7
Q ss_pred CCcchhhHhhhccccCCCCCCCcccccccCCceeeccCCC-CCCeeEEEEEcCCCCEEEEEEEeCCCC-CeEEEEeCCCc
Q 018008 1 MGTATSSMAAKFAFFPPNPPSYNIVVDEATGKLRISDVHQ-RDDVDVLKLSTKKGNEIVAMYVKNPSA-SLTVLYSHGNA 78 (362)
Q Consensus 1 ~~~~~~~~~~~~~~~pp~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~g~~l~~~~~~~~~~-~p~vv~lHG~~ 78 (362)
|+.+|+++||+||||...+....+. ...+. +..++.+.++|..|+.+.++|+.++.. .+++||+||+.
T Consensus 1 ~~~~~~~iaaklaf~~~~~~~~~~~----------~~~~~~~~~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa 70 (258)
T KOG1552|consen 1 MPPVTSSIAAKLAFFPPEPPRLLLL----------PEIRAMREFVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNA 70 (258)
T ss_pred CCccchhHHHHhhccccCCcCeeec----------ccccccCCccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcc
Confidence 7899999999999994333333332 11221 338899999999999999999988876 59999999999
Q ss_pred CChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHH
Q 018008 79 ADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 79 ~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
.+.+++...+..+....+++++++||+|+|.|.|++.+.+.++|+.+++++|.+.+| +.++|+|+|+|+|...++.+|+
T Consensus 71 ~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Las 149 (258)
T KOG1552|consen 71 ADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLAS 149 (258)
T ss_pred cchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhh
Confidence 999988899888888889999999999999999999999999999999999999998 7799999999999999999999
Q ss_pred hCCCccEEEEcCCccccchhccc-cccccccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeC
Q 018008 159 RLPRLRAVILHSPILSGLRVMYP-VKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLK 237 (362)
Q Consensus 159 ~~p~v~~~vl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~ 237 (362)
+.| +.++|+.+|++++++.+++ ....+|++.|..+++++.++||+|++||++|++++..++.++++.+++++++.|+.
T Consensus 150 r~~-~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~ 228 (258)
T KOG1552|consen 150 RYP-LAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVK 228 (258)
T ss_pred cCC-cceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEe
Confidence 999 9999999999999999998 66679999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCccccCCC
Q 018008 238 GGNHCNLELYPE 249 (362)
Q Consensus 238 g~~h~~~~~~~~ 249 (362)
|++|..+..+++
T Consensus 229 g~gH~~~~~~~~ 240 (258)
T KOG1552|consen 229 GAGHNDIELYPE 240 (258)
T ss_pred cCCCcccccCHH
Confidence 999988777664
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=5.7e-25 Score=205.82 Aligned_cols=220 Identities=19% Similarity=0.272 Sum_probs=151.2
Q ss_pred eeEEEEEcCCCCEEEEEEEeCC--CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHH
Q 018008 44 VDVLKLSTKKGNEIVAMYVKNP--SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYA 121 (362)
Q Consensus 44 ~~~~~i~~~~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 121 (362)
.++..+.+.+|.++.+..+.++ .++++|||+||++++...|+..+...+.+.||.|+++|+||||.|.+.......++
T Consensus 61 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 140 (349)
T PLN02385 61 TEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFD 140 (349)
T ss_pred eeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHH
Confidence 4455566789999887776654 45789999999998866555544444467799999999999999986433222344
Q ss_pred ----HHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchh------------------
Q 018008 122 ----DIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRV------------------ 178 (362)
Q Consensus 122 ----d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~------------------ 178 (362)
|+.+.+..+......+..+++|+||||||.+++.++..+|+ ++++|+++|+......
T Consensus 141 ~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (349)
T PLN02385 141 DLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLL 220 (349)
T ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHC
Confidence 44444444333222233589999999999999999999995 9999999986421000
Q ss_pred ----cccc---ccccccc------------cc-----------------cccCCCCCCCCCEEEEEeCCCCCCCchhHHH
Q 018008 179 ----MYPV---KRTFWFD------------IY-----------------KNIDKIPLVECPVLVIHGTEDEVVDFSHGKQ 222 (362)
Q Consensus 179 ----~~~~---~~~~~~~------------~~-----------------~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~ 222 (362)
..+. ....+.+ .+ .....+.++++|+|+|+|++|.+++++.++.
T Consensus 221 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~ 300 (349)
T PLN02385 221 PKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKF 300 (349)
T ss_pred CCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHH
Confidence 0000 0000000 00 0113456789999999999999999999999
Q ss_pred HHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhh----hcccccccccCC
Q 018008 223 LWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQEN----QRNNTEQKTEKL 273 (362)
Q Consensus 223 l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~----~~~~i~~fl~~~ 273 (362)
+++.+... ...+..+++++|+++.++|++ +++.+.+||+..
T Consensus 301 l~~~~~~~----------~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 301 LYEKASSS----------DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred HHHHcCCC----------CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 99887531 245667777888888888876 667788898643
No 3
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.93 E-value=1.1e-25 Score=185.39 Aligned_cols=226 Identities=27% Similarity=0.391 Sum_probs=187.5
Q ss_pred CCCCCeeEEEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccc
Q 018008 39 HQRDDVDVLKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQD 118 (362)
Q Consensus 39 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~ 118 (362)
......+.+.+.|.|..++.+|+.....++|+++++||+.++.+.....+.-+..+.+.+|+.++|||+|.|.|.+++.+
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G 128 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG 128 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccc
Confidence 34567889999999999999999988889999999999999998888877778888999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccchhcccccccc---------cc
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGLRVMYPVKRTF---------WF 188 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~---------~~ 188 (362)
..-|..++++++.++...+..+++|+|.|+||.++..+|+... ++.++|+-+.+++....+.+....+ +.
T Consensus 129 L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~k 208 (300)
T KOG4391|consen 129 LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYK 208 (300)
T ss_pred eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHHHHHHHH
Confidence 9999999999999998888899999999999999999999877 5999999998887644433322221 11
Q ss_pred ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC-cceEEeCCCCcCccccCCCCCcccCCcchhhhccccc
Q 018008 189 DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK-YEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTE 267 (362)
Q Consensus 189 ~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~-~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~ 267 (362)
..|.....+...+.|.|+|.|..|++||+.+++++++.|+.. +++..++++.|.+-.... -+.+.|.
T Consensus 209 n~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~d------------GYfq~i~ 276 (300)
T KOG4391|consen 209 NKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICD------------GYFQAIE 276 (300)
T ss_pred hhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEec------------cHHHHHH
Confidence 256667778888999999999999999999999999999874 566667777664433322 2568888
Q ss_pred ccccCCCCC
Q 018008 268 QKTEKLRPS 276 (362)
Q Consensus 268 ~fl~~~~~~ 276 (362)
+||.+...+
T Consensus 277 dFlaE~~~~ 285 (300)
T KOG4391|consen 277 DFLAEVVKS 285 (300)
T ss_pred HHHHHhccC
Confidence 888765443
No 4
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=5e-25 Score=204.74 Aligned_cols=221 Identities=16% Similarity=0.219 Sum_probs=153.1
Q ss_pred CeeEEEEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc---
Q 018008 43 DVDVLKLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE--- 116 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~--- 116 (362)
..+...+.+.+|..+.+..+.++ .++++|||+||++.+....+..+...+...||+|+++|+||||.|.+....
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 110 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPN 110 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCC
Confidence 34566788899999988665543 356789999999876533334444444677999999999999999753322
Q ss_pred -cchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhc---------------
Q 018008 117 -QDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVM--------------- 179 (362)
Q Consensus 117 -~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~--------------- 179 (362)
....+|+.++++.+......+..+++|+||||||.+++.++.++|+ |+++|+++|+......+
T Consensus 111 ~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (330)
T PLN02298 111 VDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVAR 190 (330)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHH
Confidence 2234667777777665433334589999999999999999999995 99999999865321100
Q ss_pred -ccc-----ccccc----------------ccccc-----------------ccCCCCCCCCCEEEEEeCCCCCCCchhH
Q 018008 180 -YPV-----KRTFW----------------FDIYK-----------------NIDKIPLVECPVLVIHGTEDEVVDFSHG 220 (362)
Q Consensus 180 -~~~-----~~~~~----------------~~~~~-----------------~~~~~~~i~~P~lvi~G~~D~~v~~~~~ 220 (362)
.+. ..... ...+. ....+..+++|+|+++|++|.++|++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~ 270 (330)
T PLN02298 191 FLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVS 270 (330)
T ss_pred HCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHH
Confidence 000 00000 00000 1233567899999999999999999999
Q ss_pred HHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhh----hcccccccccCC
Q 018008 221 KQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQEN----QRNNTEQKTEKL 273 (362)
Q Consensus 221 ~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~----~~~~i~~fl~~~ 273 (362)
+.+++.++.. +..+..+++++|..+.++|+. +.+.+.+||...
T Consensus 271 ~~l~~~i~~~----------~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 271 RALYEEAKSE----------DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHhccC----------CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 9999887632 346667777888888777753 556778888653
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=1.4e-24 Score=199.29 Aligned_cols=217 Identities=15% Similarity=0.131 Sum_probs=155.9
Q ss_pred CeeEEEEEcCCCCEEEEEEEeCC-CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-ccchH
Q 018008 43 DVDVLKLSTKKGNEIVAMYVKNP-SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-EQDTY 120 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~~~-~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~ 120 (362)
....+++...+|..+...|.... +.+|+|||+||++.+...|..++..| .+.||.|+++|+||||.|..... ..+.+
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L-~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPIL-AAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHH-HhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 34456666666765554444332 24689999999999888888777776 55699999999999999975432 24567
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch--------hcc------c----
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR--------VMY------P---- 181 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~--------~~~------~---- 181 (362)
+++.+.+..+++++++ ++++|+||||||.+++.++..+|+ |.++|++++...... ... +
T Consensus 99 ~~~a~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (302)
T PRK00870 99 ARHVEWMRSWFEQLDL--TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPV 176 (302)
T ss_pred HHHHHHHHHHHHHcCC--CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhH
Confidence 8888888888888877 789999999999999999999995 999999986421100 000 0
Q ss_pred -------c--------cccc--------ccc---ccc-----------------ccCCCCCCCCCEEEEEeCCCCCCCch
Q 018008 182 -------V--------KRTF--------WFD---IYK-----------------NIDKIPLVECPVLVIHGTEDEVVDFS 218 (362)
Q Consensus 182 -------~--------~~~~--------~~~---~~~-----------------~~~~~~~i~~P~lvi~G~~D~~v~~~ 218 (362)
. ...+ +.. .+. ....+.++++|+++|+|+.|.+++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 256 (302)
T PRK00870 177 GRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGG 256 (302)
T ss_pred HHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCc
Confidence 0 0000 000 000 01234678999999999999999976
Q ss_pred hHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 219 HGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 219 ~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
. +.+.+.+++. .+..+..++++||++++|+|+.|++.+.+|++.
T Consensus 257 ~-~~~~~~~~~~---------~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 257 D-AILQKRIPGA---------AGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred h-HHHHhhcccc---------cccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 6 7777777641 112356788889999999999999999999964
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.93 E-value=4.4e-25 Score=199.98 Aligned_cols=204 Identities=15% Similarity=0.196 Sum_probs=154.3
Q ss_pred CCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHH
Q 018008 52 KKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLE 131 (362)
Q Consensus 52 ~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~ 131 (362)
.+|.++++++.......++|||+||++++...|..++..+ .+ +|.|+++|+||||.|..+ ...+.++++.+.+..++
T Consensus 9 ~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L-~~-~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~~~~~~i 85 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEAL-DP-DLEVIAFDVPGVGGSSTP-RHPYRFPGLAKLAARML 85 (276)
T ss_pred cCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHh-cc-CceEEEECCCCCCCCCCC-CCcCcHHHHHHHHHHHH
Confidence 4677777766544444579999999999998888887776 33 689999999999999843 33557788888888899
Q ss_pred HHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc------hh---ccc-------cc-----cccc--
Q 018008 132 ETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL------RV---MYP-------VK-----RTFW-- 187 (362)
Q Consensus 132 ~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~------~~---~~~-------~~-----~~~~-- 187 (362)
+.+++ ++++|+||||||.+++.+|.++|+ |+++|++++..... .. ... .. ...+
T Consensus 86 ~~l~~--~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T TIGR02240 86 DYLDY--GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGG 163 (276)
T ss_pred HHhCc--CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccc
Confidence 88877 789999999999999999999995 99999998754210 00 000 00 0000
Q ss_pred ------------ccc------------------ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeC
Q 018008 188 ------------FDI------------------YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLK 237 (362)
Q Consensus 188 ------------~~~------------------~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~ 237 (362)
... ....+.++++++|+|+|+|++|++++++.++.+.+.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-------- 235 (276)
T TIGR02240 164 AFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-------- 235 (276)
T ss_pred eeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC--------
Confidence 000 001133567899999999999999999999999988764
Q ss_pred CCCcCccccCCCCCcccCCcchhhhcccccccccCC
Q 018008 238 GGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 238 g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
..+..+++ ||++++|+|+++++.+.+|++..
T Consensus 236 ----~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 236 ----AELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred ----CEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 45556654 89999999999999999999753
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=4e-24 Score=193.57 Aligned_cols=210 Identities=21% Similarity=0.320 Sum_probs=148.3
Q ss_pred EEcCCCCEEEEEEEeC-CCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc----cchHHHH
Q 018008 49 LSTKKGNEIVAMYVKN-PSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE----QDTYADI 123 (362)
Q Consensus 49 i~~~~g~~l~~~~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~----~~~~~d~ 123 (362)
+...||..+.+.++.+ +.++++|+++||++.+...|...+..+ ...||.|+++|+||||.|.+.... ...++|+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l-~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENI-SSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHH-HhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHH
Confidence 3456899998877666 356778888899999887776665555 677999999999999999754322 2234556
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchh-------------cccc------c
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRV-------------MYPV------K 183 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~-------------~~~~------~ 183 (362)
...+..+.+.+. ..+++|+||||||.+++.++...|+ ++++|+++|....... ..+. .
T Consensus 84 ~~~l~~~~~~~~--~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T PHA02857 84 VQHVVTIKSTYP--GVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLC 161 (276)
T ss_pred HHHHHHHHhhCC--CCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCC
Confidence 666666555543 3689999999999999999999996 8999999996532100 0000 0
Q ss_pred cc-----------cccccc-------------------cccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcce
Q 018008 184 RT-----------FWFDIY-------------------KNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEP 233 (362)
Q Consensus 184 ~~-----------~~~~~~-------------------~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~ 233 (362)
.. +..+.+ .....+.++++|+|+++|++|.++|++.++++.+.+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~--- 238 (276)
T PHA02857 162 PESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCN--- 238 (276)
T ss_pred HhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCC---
Confidence 00 000000 012346678999999999999999999999999887543
Q ss_pred EEeCCCCcCccccCCCCCcccCCcch---hhhcccccccccC
Q 018008 234 LWLKGGNHCNLELYPENVSEQGSDQQ---ENQRNNTEQKTEK 272 (362)
Q Consensus 234 ~~i~g~~h~~~~~~~~~~H~~~~e~~---~~~~~~i~~fl~~ 272 (362)
..+..+++++|.++.|.+ +++.+.+.+||..
T Consensus 239 --------~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 239 --------REIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred --------ceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 345556666777666654 4577888889865
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=3.7e-24 Score=195.64 Aligned_cols=202 Identities=19% Similarity=0.226 Sum_probs=149.8
Q ss_pred CCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCC------CccchHHHHHHH
Q 018008 53 KGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKP------SEQDTYADIEAA 126 (362)
Q Consensus 53 ~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~------~~~~~~~d~~~~ 126 (362)
+|..+.+.. ....+++|||+||++++...|..++..+. . .++|+++|+||||.|.... ...+.++++.+.
T Consensus 16 ~~~~i~y~~--~G~~~~~vlllHG~~~~~~~w~~~~~~L~-~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~ 91 (294)
T PLN02824 16 KGYNIRYQR--AGTSGPALVLVHGFGGNADHWRKNTPVLA-K-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQ 91 (294)
T ss_pred cCeEEEEEE--cCCCCCeEEEECCCCCChhHHHHHHHHHH-h-CCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHH
Confidence 465655332 22235899999999999999988888874 3 3689999999999998532 124677888999
Q ss_pred HHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc---------hh----ccccc---------
Q 018008 127 YKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL---------RV----MYPVK--------- 183 (362)
Q Consensus 127 i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~---------~~----~~~~~--------- 183 (362)
+..+++++++ ++++|+||||||.+++.++.++|+ |+++|+++|...+. .. +....
T Consensus 92 l~~~l~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (294)
T PLN02824 92 LNDFCSDVVG--DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAF 169 (294)
T ss_pred HHHHHHHhcC--CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHH
Confidence 9999988887 899999999999999999999995 99999998754211 00 00000
Q ss_pred ----------ccc----cc---------------------------ccc------cccCCCCCCCCCEEEEEeCCCCCCC
Q 018008 184 ----------RTF----WF---------------------------DIY------KNIDKIPLVECPVLVIHGTEDEVVD 216 (362)
Q Consensus 184 ----------~~~----~~---------------------------~~~------~~~~~~~~i~~P~lvi~G~~D~~v~ 216 (362)
... +. +.. ...+.++++++|+|+|+|++|.+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 249 (294)
T PLN02824 170 FKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEP 249 (294)
T ss_pred HHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCC
Confidence 000 00 000 0013356789999999999999999
Q ss_pred chhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 217 FSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 217 ~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
.+.++.+.+..+ ...+..++++||+++.|+|++|++.+.+|++.
T Consensus 250 ~~~~~~~~~~~~------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 250 VELGRAYANFDA------------VEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred hHHHHHHHhcCC------------ccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 988888666544 24667778889999999999999999999964
No 9
>PLN02965 Probable pheophorbidase
Probab=99.92 E-value=3.8e-24 Score=191.60 Aligned_cols=190 Identities=13% Similarity=0.136 Sum_probs=144.1
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEcc
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSV 148 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~ 148 (362)
-.|||+||++.+...|..++..| ...||.|+++|+||||.|.......+.++++.+.+..+++.++.. ++++|+||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L-~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~~lvGhSm 81 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLL-DAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD-HKVILVGHSI 81 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHH-hhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC-CCEEEEecCc
Confidence 35999999999888888777777 566899999999999999754443556788888888888887641 4999999999
Q ss_pred chHHHHHHHHhCCC-ccEEEEcCCcc--cc---chh----------cc-----c---cc-------cccc----ccc---
Q 018008 149 GSGPTLELAVRLPR-LRAVILHSPIL--SG---LRV----------MY-----P---VK-------RTFW----FDI--- 190 (362)
Q Consensus 149 Gg~ia~~~a~~~p~-v~~~vl~~p~~--~~---~~~----------~~-----~---~~-------~~~~----~~~--- 190 (362)
||.+++.++.++|+ |.++|++++.. .+ ... .. . .. ..++ +..
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPL 161 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCH
Confidence 99999999999985 99999988642 11 000 00 0 00 0000 000
Q ss_pred --------------cc---c----cCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCC
Q 018008 191 --------------YK---N----IDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPE 249 (362)
Q Consensus 191 --------------~~---~----~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~ 249 (362)
.. . ...+..+++|+++++|++|..+|++..+.+.+.+++ +.+..+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~------------a~~~~i~~ 229 (255)
T PLN02965 162 EDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP------------AQTYVLED 229 (255)
T ss_pred HHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc------------ceEEEecC
Confidence 00 0 012335899999999999999999999999988774 56778889
Q ss_pred CCcccCCcchhhhcccccccccC
Q 018008 250 NVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 250 ~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+||++++|+|++|++.+.+|++.
T Consensus 230 ~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 230 SDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred CCCchhhcCHHHHHHHHHHHHHH
Confidence 99999999999999999998764
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.92 E-value=4.6e-24 Score=193.60 Aligned_cols=195 Identities=18% Similarity=0.279 Sum_probs=139.1
Q ss_pred EeCCCCCeEEEEeCCCcCChhchHH---HHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCC
Q 018008 62 VKNPSASLTVLYSHGNAADLGQMCP---IFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKE 138 (362)
Q Consensus 62 ~~~~~~~p~vv~lHG~~~~~~~~~~---~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 138 (362)
+...+..|+||++||++.+...|.. .+..+ ...||+|+++|+||||.|..............+.+..+++.+++
T Consensus 24 y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l-~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-- 100 (282)
T TIGR03343 24 YNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPF-VDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDI-- 100 (282)
T ss_pred EEecCCCCeEEEECCCCCchhhHHHHHHHHHHH-HhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCC--
Confidence 3334466889999999887655543 34444 45689999999999999985432111111345556677777777
Q ss_pred CcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccc-----------hhcc-----c-------------ccc----
Q 018008 139 EDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGL-----------RVMY-----P-------------VKR---- 184 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~-----------~~~~-----~-------------~~~---- 184 (362)
++++++||||||.+++.++.++| .|+++|+++|..... .... + ...
T Consensus 101 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (282)
T TIGR03343 101 EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLIT 180 (282)
T ss_pred CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCc
Confidence 89999999999999999999999 499999988642100 0000 0 000
Q ss_pred -----cccc----------c-----------cccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCC
Q 018008 185 -----TFWF----------D-----------IYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKG 238 (362)
Q Consensus 185 -----~~~~----------~-----------~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g 238 (362)
..|. . .++....++.+++|+|+++|++|.+++++.++.+.+.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~--------- 251 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPD--------- 251 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCC---------
Confidence 0000 0 0001123457899999999999999999999998888763
Q ss_pred CCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 239 GNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 239 ~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
+.+..++++||+++.|+|+.|++.|.+|+.
T Consensus 252 ---~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 252 ---AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred ---CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 677788889999999999999999999985
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.91 E-value=1.1e-23 Score=195.55 Aligned_cols=220 Identities=14% Similarity=0.139 Sum_probs=151.0
Q ss_pred eEEEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-----ccch
Q 018008 45 DVLKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-----EQDT 119 (362)
Q Consensus 45 ~~~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-----~~~~ 119 (362)
+...+...+|..+.+..+.++.++++||++||++.+...|...+..+ ...||.|+++|+||||.|.+... ....
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l-~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 109 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDL-FHLGYDVLIIDHRGQGRSGRLLDDPHRGHVER 109 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHH-HHCCCeEEEEcCCCCCCCCCCCCCCCcCcccc
Confidence 44566678898888777665566789999999998877777776666 56799999999999999974321 1123
Q ss_pred HHHHHHHHHHHHHH----hCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch------------hcc--
Q 018008 120 YADIEAAYKCLEET----YGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR------------VMY-- 180 (362)
Q Consensus 120 ~~d~~~~i~~l~~~----~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~------------~~~-- 180 (362)
++++.+.+..+.+. ++. .+++++||||||.+++.++..+|+ ++++|+++|...... ...
T Consensus 110 ~~~~~~d~~~~~~~~~~~~~~--~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 110 FNDYVDDLAAFWQQEIQPGPY--RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCCC--CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 44444444444443 343 789999999999999999999995 999999998642100 000
Q ss_pred ------------ccc------------cc---cccccc------------------------cccCCCCCCCCCEEEEEe
Q 018008 181 ------------PVK------------RT---FWFDIY------------------------KNIDKIPLVECPVLVIHG 209 (362)
Q Consensus 181 ------------~~~------------~~---~~~~~~------------------------~~~~~~~~i~~P~lvi~G 209 (362)
.+. .. .+.+.+ .....+..+++|+|+|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 267 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQA 267 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Confidence 000 00 000000 001345678999999999
Q ss_pred CCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcch---hhhcccccccccC
Q 018008 210 TEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQ---ENQRNNTEQKTEK 272 (362)
Q Consensus 210 ~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~---~~~~~~i~~fl~~ 272 (362)
++|.+++++.++.+.+.++..... .....+..+++++|.++.|.+ +.+.+.+.+||+.
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~-----~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHP-----CEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCC-----CCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 999999999999998887541000 012356778888888887764 5566788888864
No 12
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=4.3e-23 Score=184.60 Aligned_cols=193 Identities=17% Similarity=0.185 Sum_probs=143.9
Q ss_pred eEEEEEcCCCCEEEEEEEeCC----CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCC-cCCCCCCC---c
Q 018008 45 DVLKLSTKKGNEIVAMYVKNP----SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGY-GHSSGKPS---E 116 (362)
Q Consensus 45 ~~~~i~~~~g~~l~~~~~~~~----~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~s~~~~~---~ 116 (362)
.+.-+.+.+|..|.+|+..+. .+.++||++||++.+... +..+++.+.+.||+|+.+|++|+ |+|.+... .
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~-~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDH-FAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHH-HHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 345678899999999998885 245899999999997643 55556666889999999999988 99986542 2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhcc----------ccc---
Q 018008 117 QDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMY----------PVK--- 183 (362)
Q Consensus 117 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~----------~~~--- 183 (362)
.....|+..+++++.++ +. ++++|+||||||.+++..|... +++++|+.+|+.+....+. +..
T Consensus 89 s~g~~Dl~aaid~lk~~-~~--~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp 164 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTR-GI--NNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELP 164 (307)
T ss_pred cccHHHHHHHHHHHHhc-CC--CceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhcccccCcccccc
Confidence 23468999999999875 33 7899999999999987666643 5999999999877321111 000
Q ss_pred ------------ccccccc--------ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhc-cCcceEEeCCCCcC
Q 018008 184 ------------RTFWFDI--------YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCK-DKYEPLWLKGGNHC 242 (362)
Q Consensus 184 ------------~~~~~~~--------~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~-~~~~~~~i~g~~h~ 242 (362)
..+..+. ...++.++.+++|+|+|||+.|.+||++.++++++.++ .+++++.++|+.|.
T Consensus 165 ~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 165 EDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred cccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 0011110 11124456678999999999999999999999999986 46778888888773
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.91 E-value=4.9e-23 Score=186.07 Aligned_cols=202 Identities=19% Similarity=0.205 Sum_probs=149.3
Q ss_pred CCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHH
Q 018008 53 KGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEE 132 (362)
Q Consensus 53 ~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~ 132 (362)
+|..+.+... ++...|+|||+||++++...|..++..+ .+ +|.|+++|+||||.|.........++++.+.+..+++
T Consensus 14 ~~~~~~~~~~-g~~~~~~vv~~hG~~~~~~~~~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~ 90 (278)
T TIGR03056 14 GPFHWHVQDM-GPTAGPLLLLLHGTGASTHSWRDLMPPL-AR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCA 90 (278)
T ss_pred CCEEEEEEec-CCCCCCeEEEEcCCCCCHHHHHHHHHHH-hh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHH
Confidence 5655543222 2334689999999999988888877776 33 6999999999999998655445678888888888888
Q ss_pred HhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchh--------------ccccc----------c---
Q 018008 133 TYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRV--------------MYPVK----------R--- 184 (362)
Q Consensus 133 ~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~--------------~~~~~----------~--- 184 (362)
+.++ ++++|+||||||.+++.++...|. ++++|++++....... ..+.. .
T Consensus 91 ~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (278)
T TIGR03056 91 AEGL--SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRV 168 (278)
T ss_pred HcCC--CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcch
Confidence 8876 789999999999999999999995 9999998764321100 00000 0
Q ss_pred ----------------cccccccc-------------------ccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 185 ----------------TFWFDIYK-------------------NIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 185 ----------------~~~~~~~~-------------------~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
.++...+. ....++++++|+|+|+|++|..++.+..+.+.+.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~ 248 (278)
T TIGR03056 169 ERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPT 248 (278)
T ss_pred hHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccC
Confidence 00000000 0123566889999999999999999988888877653
Q ss_pred CcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 230 KYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 230 ~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
..+..++++||+.+.|.|+++++.|.+|++
T Consensus 249 ------------~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 249 ------------ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ------------CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 566777888999999999999999999874
No 14
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.91 E-value=1.7e-23 Score=182.32 Aligned_cols=223 Identities=19% Similarity=0.206 Sum_probs=161.3
Q ss_pred CeeEEEEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCC----C
Q 018008 43 DVDVLKLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKP----S 115 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~----~ 115 (362)
....-.+.+.+|..+....+.+. ..+..|+++||++......+..+...++..||.|+++|++|||.|+|.. .
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~ 105 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPS 105 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCc
Confidence 35566788999999988777662 4567999999999987666666666668899999999999999999743 3
Q ss_pred ccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccccc-----------
Q 018008 116 EQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVK----------- 183 (362)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~----------- 183 (362)
....++|+...++.+..+-..+..+..|+||||||.+++.++.+.|+ .+|+|+++|+......+.+..
T Consensus 106 ~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~ 185 (313)
T KOG1455|consen 106 FDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSK 185 (313)
T ss_pred HHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHH
Confidence 34455777777777666555556799999999999999999999996 899999998764322111000
Q ss_pred -ccccc-------------c-----------------------------cccccCCCCCCCCCEEEEEeCCCCCCCchhH
Q 018008 184 -RTFWF-------------D-----------------------------IYKNIDKIPLVECPVLVIHGTEDEVVDFSHG 220 (362)
Q Consensus 184 -~~~~~-------------~-----------------------------~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~ 220 (362)
...|. + ..+-...+.++++|.+++||++|.+++++.+
T Consensus 186 liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~S 265 (313)
T KOG1455|consen 186 LIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVS 265 (313)
T ss_pred hCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHH
Confidence 00000 0 0011345678899999999999999999999
Q ss_pred HHHHHHhccC-cceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 221 KQLWELCKDK-YEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 221 ~~l~~~~~~~-~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+.+++..... +++..++|..|.-+.-- .-|+.+.+...|.+||..
T Consensus 266 k~Lye~A~S~DKTlKlYpGm~H~Ll~gE-------~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 266 KELYEKASSSDKTLKLYPGMWHSLLSGE-------PDENVEIVFGDIISWLDE 311 (313)
T ss_pred HHHHHhccCCCCceeccccHHHHhhcCC-------CchhHHHHHHHHHHHHHh
Confidence 9999998864 55666666666333211 124455666778888854
No 15
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=4.8e-23 Score=187.51 Aligned_cols=215 Identities=17% Similarity=0.169 Sum_probs=151.7
Q ss_pred ccCCCCCCeeEEEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC
Q 018008 36 SDVHQRDDVDVLKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS 115 (362)
Q Consensus 36 ~~~~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~ 115 (362)
++.++...++...++. +|.++++.. .+.+++|||+||++.+...|...+..+ .+ +|+|+++|+||||.|..+..
T Consensus 6 ~~~~~~~~~~~~~~~~-~~~~i~y~~---~G~~~~iv~lHG~~~~~~~~~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~ 79 (286)
T PRK03204 6 TPDPQLYPFESRWFDS-SRGRIHYID---EGTGPPILLCHGNPTWSFLYRDIIVAL-RD-RFRCVAPDYLGFGLSERPSG 79 (286)
T ss_pred cCCCccccccceEEEc-CCcEEEEEE---CCCCCEEEEECCCCccHHHHHHHHHHH-hC-CcEEEEECCCCCCCCCCCCc
Confidence 3444455555555655 455554322 234689999999998776777766665 33 69999999999999985444
Q ss_pred ccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccch--------h-ccc--cc
Q 018008 116 EQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGLR--------V-MYP--VK 183 (362)
Q Consensus 116 ~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~--------~-~~~--~~ 183 (362)
..+..+++...+..+++++++ ++++++||||||.+++.++..+| .|+++|++++...... . ..+ ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (286)
T PRK03204 80 FGYQIDEHARVIGEFVDHLGL--DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQ 157 (286)
T ss_pred cccCHHHHHHHHHHHHHHhCC--CCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccch
Confidence 456678899999999998887 78999999999999999999998 4999999876431100 0 000 00
Q ss_pred ----------cc----------------ccccc----------------ccc----cCC----CC--CCCCCEEEEEeCC
Q 018008 184 ----------RT----------------FWFDI----------------YKN----IDK----IP--LVECPVLVIHGTE 211 (362)
Q Consensus 184 ----------~~----------------~~~~~----------------~~~----~~~----~~--~i~~P~lvi~G~~ 211 (362)
.. .+... +.. ... +. ..++|+|+|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~ 237 (286)
T PRK03204 158 YAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMK 237 (286)
T ss_pred hhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCC
Confidence 00 00000 000 000 11 1279999999999
Q ss_pred CCCCCch-hHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccc
Q 018008 212 DEVVDFS-HGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKT 270 (362)
Q Consensus 212 D~~v~~~-~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl 270 (362)
|..+++. ..+.+.+.+++ ..+..++++||++++|+|++|++.+.+||
T Consensus 238 D~~~~~~~~~~~~~~~ip~------------~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 238 DVAFRPKTILPRLRATFPD------------HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CcccCcHHHHHHHHHhcCC------------CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 9988665 46777777764 67788899999999999999999999997
No 16
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=3.1e-23 Score=194.64 Aligned_cols=190 Identities=21% Similarity=0.224 Sum_probs=139.4
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
.|+|||+||++++...|..++..+ .+ +|.|+++|+||||.|.......+.++++.+.+..+++.+++ ++++|+|||
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L-~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~--~~~~lvGhS 163 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVL-AK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQ--KPTVLIGNS 163 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHH-hc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcC--CCeEEEEEC
Confidence 489999999999998888888776 44 79999999999999985444456777888888888888877 899999999
Q ss_pred cchHHHHHHHHh-CC-CccEEEEcCCcccc--------chh--ccc-------------c-----c----cc--------
Q 018008 148 VGSGPTLELAVR-LP-RLRAVILHSPILSG--------LRV--MYP-------------V-----K----RT-------- 185 (362)
Q Consensus 148 ~Gg~ia~~~a~~-~p-~v~~~vl~~p~~~~--------~~~--~~~-------------~-----~----~~-------- 185 (362)
|||.+++.++.. +| .|+++|++++.... ... ..+ . . ..
T Consensus 164 ~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (360)
T PLN02679 164 VGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLS 243 (360)
T ss_pred HHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHH
Confidence 999999998874 57 49999999864210 000 000 0 0 00
Q ss_pred c----------cc-------------c----cc------cccCCCCCCCCCEEEEEeCCCCCCCchhH-----HHHHHHh
Q 018008 186 F----------WF-------------D----IY------KNIDKIPLVECPVLVIHGTEDEVVDFSHG-----KQLWELC 227 (362)
Q Consensus 186 ~----------~~-------------~----~~------~~~~~~~~i~~P~lvi~G~~D~~v~~~~~-----~~l~~~~ 227 (362)
. +. + .. +....+.++++|+|+|+|++|.++|++.. +.+.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i 323 (360)
T PLN02679 244 VYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL 323 (360)
T ss_pred hccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC
Confidence 0 00 0 00 00123567899999999999999988742 2233333
Q ss_pred ccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccCC
Q 018008 228 KDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 228 ~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
+ ...+.+++++||++++|+|++|++.|.+||+..
T Consensus 324 p------------~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 324 P------------NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred C------------ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 3 256778899999999999999999999999754
No 17
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.91 E-value=3.8e-23 Score=186.79 Aligned_cols=205 Identities=18% Similarity=0.216 Sum_probs=147.4
Q ss_pred CCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCcc--chHHHHHHHHHH
Q 018008 52 KKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQ--DTYADIEAAYKC 129 (362)
Q Consensus 52 ~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~--~~~~d~~~~i~~ 129 (362)
.+|..+.+....+++.+++||++||++++...|+..+..++.+.||.|+++|+||+|.|....... ..++++.+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 88 (288)
T TIGR01250 9 VDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEE 88 (288)
T ss_pred CCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHH
Confidence 445444433333334568999999987777677777888877779999999999999998543322 567788888888
Q ss_pred HHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchh----------ccc--------------c--
Q 018008 130 LEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRV----------MYP--------------V-- 182 (362)
Q Consensus 130 l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~----------~~~--------------~-- 182 (362)
++++++. ++++++||||||.+++.++..+|+ ++++|+++++...... +.. .
T Consensus 89 ~~~~~~~--~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (288)
T TIGR01250 89 VREKLGL--DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDN 166 (288)
T ss_pred HHHHcCC--CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcch
Confidence 8888876 779999999999999999999995 9999998875421100 000 0
Q ss_pred ------c----------cccccc------------------------------cccccCCCCCCCCCEEEEEeCCCCCCC
Q 018008 183 ------K----------RTFWFD------------------------------IYKNIDKIPLVECPVLVIHGTEDEVVD 216 (362)
Q Consensus 183 ------~----------~~~~~~------------------------------~~~~~~~~~~i~~P~lvi~G~~D~~v~ 216 (362)
. ...+.. .++....+..+++|+++++|++|.+ +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~ 245 (288)
T TIGR01250 167 PEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-T 245 (288)
T ss_pred HHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-C
Confidence 0 000000 0001123456899999999999984 5
Q ss_pred chhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 217 FSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 217 ~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
+...+.+.+.++. ..+..++++||+.+.++|+++++.+.+||+
T Consensus 246 ~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 246 PEAAREMQELIAG------------SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHHhccC------------CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 6777777766653 456777888999999999999999998874
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.91 E-value=1.3e-23 Score=186.95 Aligned_cols=190 Identities=18% Similarity=0.268 Sum_probs=144.6
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYG 145 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 145 (362)
..+|+||++||++++...|...+..+ . .+|.|+++|+||||.|.........+++..+.+..++++.+. ++++++|
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l-~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~G 86 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVL-T-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNI--ERFHFVG 86 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHH-H-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCC--CcEEEEE
Confidence 45789999999999987777776655 3 379999999999999986555556778888888888888876 7899999
Q ss_pred EccchHHHHHHHHhCCC-ccEEEEcCCccccch-----------hcccc-------------ccccccc-----------
Q 018008 146 QSVGSGPTLELAVRLPR-LRAVILHSPILSGLR-----------VMYPV-------------KRTFWFD----------- 189 (362)
Q Consensus 146 hS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~-----------~~~~~-------------~~~~~~~----------- 189 (362)
|||||.+++.++...|+ |+++|+++++..... .+... ....|..
T Consensus 87 ~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (257)
T TIGR03611 87 HALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEA 166 (257)
T ss_pred echhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhh
Confidence 99999999999999985 999999987543110 00000 0000000
Q ss_pred --------------------cccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCC
Q 018008 190 --------------------IYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPE 249 (362)
Q Consensus 190 --------------------~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~ 249 (362)
.++....+..+++|+++++|++|.+++++.++.+++.+++ ..+..+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~ 234 (257)
T TIGR03611 167 HALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN------------AQLKLLPY 234 (257)
T ss_pred hcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC------------ceEEEECC
Confidence 0111234567899999999999999999999988887764 45566777
Q ss_pred CCcccCCcchhhhccccccccc
Q 018008 250 NVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 250 ~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
+||+.++++|+++++.+.+||+
T Consensus 235 ~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 235 GGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred CCCCccccCHHHHHHHHHHHhc
Confidence 8899999999999999999985
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=5.2e-23 Score=188.20 Aligned_cols=203 Identities=16% Similarity=0.244 Sum_probs=147.0
Q ss_pred CCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHH
Q 018008 52 KKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLE 131 (362)
Q Consensus 52 ~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~ 131 (362)
.+|.++.+... +.+++|||+||++++...|...+..| .+.+ .|+++|+||||.|..+. ..+.+++..+.+..++
T Consensus 14 ~~g~~i~y~~~---G~g~~vvllHG~~~~~~~w~~~~~~L-~~~~-~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~ll 87 (295)
T PRK03592 14 VLGSRMAYIET---GEGDPIVFLHGNPTSSYLWRNIIPHL-AGLG-RCLAPDLIGMGASDKPD-IDYTFADHARYLDAWF 87 (295)
T ss_pred ECCEEEEEEEe---CCCCEEEEECCCCCCHHHHHHHHHHH-hhCC-EEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHH
Confidence 36666553332 35689999999999988888877777 4444 99999999999998543 3467788888888999
Q ss_pred HHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCcccc-----ch--------hcc-cc------------cc
Q 018008 132 ETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSG-----LR--------VMY-PV------------KR 184 (362)
Q Consensus 132 ~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~-----~~--------~~~-~~------------~~ 184 (362)
+++++ ++++++||||||.+++.++..+|+ |+++|++++.... .. .+. +. ..
T Consensus 88 ~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
T PRK03592 88 DALGL--DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIE 165 (295)
T ss_pred HHhCC--CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHh
Confidence 99887 899999999999999999999995 9999999974211 00 000 00 00
Q ss_pred cccccc----------------c-------------c-----------------ccCCCCCCCCCEEEEEeCCCCCCCch
Q 018008 185 TFWFDI----------------Y-------------K-----------------NIDKIPLVECPVLVIHGTEDEVVDFS 218 (362)
Q Consensus 185 ~~~~~~----------------~-------------~-----------------~~~~~~~i~~P~lvi~G~~D~~v~~~ 218 (362)
..+... + . ....+.++++|+|+|+|++|.++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 245 (295)
T PRK03592 166 RVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTG 245 (295)
T ss_pred hcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcH
Confidence 000000 0 0 00123567999999999999999666
Q ss_pred hHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccCC
Q 018008 219 HGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 219 ~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
...++...... ...+..++++||+++.|+|+++++.+.+|++..
T Consensus 246 ~~~~~~~~~~~-----------~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 246 AIRDWCRSWPN-----------QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred HHHHHHHHhhh-----------hcceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 55555544332 256677788999999999999999999999743
No 20
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.90 E-value=1e-22 Score=194.75 Aligned_cols=211 Identities=18% Similarity=0.264 Sum_probs=151.4
Q ss_pred EEcCCCCEEEEEEEeCCC--CCeEEEEeCCCcCChhchHHHH-HHHH--HhcCeEEEEEccCCCcCCCCCCCccchHHHH
Q 018008 49 LSTKKGNEIVAMYVKNPS--ASLTVLYSHGNAADLGQMCPIF-TELS--VHLNVSLMGYDYSGYGHSSGKPSEQDTYADI 123 (362)
Q Consensus 49 i~~~~g~~l~~~~~~~~~--~~p~vv~lHG~~~~~~~~~~~~-~~l~--~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~ 123 (362)
+.+.+|.++++....+++ .+++|||+||++++...|...+ ..+. ...+|.|+++|+||||.|..+....+.++++
T Consensus 180 ~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~ 259 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREH 259 (481)
T ss_pred eEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHH
Confidence 334455666665555443 3589999999999987777543 4442 2368999999999999998544444667777
Q ss_pred HHHH-HHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch----------------hccccc--
Q 018008 124 EAAY-KCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR----------------VMYPVK-- 183 (362)
Q Consensus 124 ~~~i-~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~----------------~~~~~~-- 183 (362)
.+.+ ..+++.+++ ++++++||||||.+++.++.++|+ |+++|+++|...... ...+..
T Consensus 260 a~~l~~~ll~~lg~--~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (481)
T PLN03087 260 LEMIERSVLERYKV--KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAF 337 (481)
T ss_pred HHHHHHHHHHHcCC--CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCcccc
Confidence 7777 477888887 899999999999999999999995 999999986431000 000000
Q ss_pred ------------cc----------ccc----------------ccc-----c-c-------c--------C----CCCCC
Q 018008 184 ------------RT----------FWF----------------DIY-----K-N-------I--------D----KIPLV 200 (362)
Q Consensus 184 ------------~~----------~~~----------------~~~-----~-~-------~--------~----~~~~i 200 (362)
.. .|. +.+ . . + + ....+
T Consensus 338 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I 417 (481)
T PLN03087 338 GASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQL 417 (481)
T ss_pred chhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhC
Confidence 00 000 000 0 0 0 0 01157
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCC-cchhhhcccccccccCC
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGS-DQQENQRNNTEQKTEKL 273 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~-e~~~~~~~~i~~fl~~~ 273 (362)
++|+|+|+|++|.++|++.++.+.+.+++ ..+..++++||.+++ ++|+.|++.+.+|...+
T Consensus 418 ~vPtLII~Ge~D~ivP~~~~~~la~~iP~------------a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 418 KCDVAIFHGGDDELIPVECSYAVKAKVPR------------ARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHhCCC------------CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 89999999999999999999999988874 677888889999885 99999999999998643
No 21
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.90 E-value=3e-23 Score=190.43 Aligned_cols=217 Identities=19% Similarity=0.248 Sum_probs=161.5
Q ss_pred CeeEEEEEcCCCC-EEEEEEEeCC--------CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCC-CC
Q 018008 43 DVDVLKLSTKKGN-EIVAMYVKNP--------SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHS-SG 112 (362)
Q Consensus 43 ~~~~~~i~~~~g~-~l~~~~~~~~--------~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s-~~ 112 (362)
.++...+...+|. .+..-+++.. ..+++||++||++++...|...+..+....|+.|+++|++|+|.+ ..
T Consensus 24 ~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~ 103 (326)
T KOG1454|consen 24 TLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL 103 (326)
T ss_pred cccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCC
Confidence 4556666667773 3333333332 368999999999999999999999998887899999999999954 44
Q ss_pred CCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEE---EcCCccccch-----------
Q 018008 113 KPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVI---LHSPILSGLR----------- 177 (362)
Q Consensus 113 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~v---l~~p~~~~~~----------- 177 (362)
+....++..+....+..+...++. ++++++|||+||.+++.+|+.+|+ |+++| +++|......
T Consensus 104 ~~~~~y~~~~~v~~i~~~~~~~~~--~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 181 (326)
T KOG1454|consen 104 PRGPLYTLRELVELIRRFVKEVFV--EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLD 181 (326)
T ss_pred CCCCceehhHHHHHHHHHHHhhcC--cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhh
Confidence 455557788888889888888887 779999999999999999999996 99999 5554221100
Q ss_pred -------hccc-------------------------------------------cccccccccc--------cccCCCCC
Q 018008 178 -------VMYP-------------------------------------------VKRTFWFDIY--------KNIDKIPL 199 (362)
Q Consensus 178 -------~~~~-------------------------------------------~~~~~~~~~~--------~~~~~~~~ 199 (362)
...+ ..+..+.+.+ .....++.
T Consensus 182 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (326)
T KOG1454|consen 182 KFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKK 261 (326)
T ss_pred hhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhcc
Confidence 0000 0000001111 11223445
Q ss_pred CC-CCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccCC
Q 018008 200 VE-CPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 200 i~-~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
+. ||+|+++|+.|+++|.+.++.+.+.++ ++.++.++++||.+++|.|+++++.|..|++..
T Consensus 262 i~~~pvlii~G~~D~~~p~~~~~~~~~~~p------------n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 262 IWKCPVLIIWGDKDQIVPLELAEELKKKLP------------NAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred ccCCceEEEEcCcCCccCHHHHHHHHhhCC------------CceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 55 999999999999999998888888874 477888888899999999999999999999753
No 22
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.89 E-value=4.7e-22 Score=175.97 Aligned_cols=209 Identities=19% Similarity=0.251 Sum_probs=154.6
Q ss_pred EEcCCCCEEEEEEEe-CCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-ccchHHHHHHH
Q 018008 49 LSTKKGNEIVAMYVK-NPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-EQDTYADIEAA 126 (362)
Q Consensus 49 i~~~~g~~l~~~~~~-~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~d~~~~ 126 (362)
+.+-+| +.+.+.. .++..|+|+++||+....-.|+.++..+ +..||+|+++|+||+|.|+.+.. ..++...+...
T Consensus 26 ~~~~~g--I~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~l-a~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~d 102 (322)
T KOG4178|consen 26 FVTYKG--IRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGL-ASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGD 102 (322)
T ss_pred eEEEcc--EEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhh-hhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHH
Confidence 334455 4433433 4567899999999999999999999988 66789999999999999996655 67788999999
Q ss_pred HHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc-----cchhc---------------------
Q 018008 127 YKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS-----GLRVM--------------------- 179 (362)
Q Consensus 127 i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~-----~~~~~--------------------- 179 (362)
+..+++++++ ++++++||+|||++|+.+|..+|+ |+++|+++.... ....+
T Consensus 103 i~~lld~Lg~--~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~ 180 (322)
T KOG4178|consen 103 IVALLDHLGL--KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPET 180 (322)
T ss_pred HHHHHHHhcc--ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchh
Confidence 9999999997 999999999999999999999995 999999874322 00000
Q ss_pred --------------------cc-ccc------cccc-------------------------ccccc----cCCCCCCCCC
Q 018008 180 --------------------YP-VKR------TFWF-------------------------DIYKN----IDKIPLVECP 203 (362)
Q Consensus 180 --------------------~~-~~~------~~~~-------------------------~~~~~----~~~~~~i~~P 203 (362)
.+ ... ..|. +...+ .-.+..+++|
T Consensus 181 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iP 260 (322)
T KOG4178|consen 181 ELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIP 260 (322)
T ss_pred hhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccc
Confidence 00 000 0010 01111 2234568999
Q ss_pred EEEEEeCCCCCCCch-hHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccCC
Q 018008 204 VLVIHGTEDEVVDFS-HGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 204 ~lvi~G~~D~~v~~~-~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
+++|+|+.|.+.+.. ..+.+...++... ...++.++|||++.|+|+++++.+.+|+++.
T Consensus 261 v~fi~G~~D~v~~~p~~~~~~rk~vp~l~-----------~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 261 VLFIWGDLDPVLPYPIFGELYRKDVPRLT-----------ERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred eEEEEecCcccccchhHHHHHHHhhcccc-----------ceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 999999999998887 3444444444322 3456667899999999999999999999753
No 23
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.89 E-value=1.4e-22 Score=180.97 Aligned_cols=189 Identities=15% Similarity=0.208 Sum_probs=142.4
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYG 145 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 145 (362)
.++|+|||+||++++...|...+..+ . .+|.|+++|+||||.|.... ...++++.+.+..+++.++. ++++|+|
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l-~-~~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l~~--~~~~lvG 87 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDL-V-NDHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDALQI--EKATFIG 87 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHH-h-hCCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHcCC--CceEEEE
Confidence 46789999999999988777777766 3 36999999999999998533 35667777788888888776 7899999
Q ss_pred EccchHHHHHHHHhCCC-ccEEEEcCCccccc------------hhc-----c-----------cccc------------
Q 018008 146 QSVGSGPTLELAVRLPR-LRAVILHSPILSGL------------RVM-----Y-----------PVKR------------ 184 (362)
Q Consensus 146 hS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~------------~~~-----~-----------~~~~------------ 184 (362)
|||||.+++.++..+|+ |+++|++++..... ... . ....
T Consensus 88 hS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (255)
T PRK10673 88 HSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFV 167 (255)
T ss_pred ECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCC
Confidence 99999999999999985 99999975321100 000 0 0000
Q ss_pred -cccc-------ccc---cccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcc
Q 018008 185 -TFWF-------DIY---KNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSE 253 (362)
Q Consensus 185 -~~~~-------~~~---~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~ 253 (362)
..|. ..+ ...+.++.+++|+|+|+|++|..++.+..+.+.+.+++ ..+..++++||+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~ 235 (255)
T PRK10673 168 DGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ------------ARAHVIAGAGHW 235 (255)
T ss_pred cceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC------------cEEEEeCCCCCe
Confidence 0000 001 11234556789999999999999999888888888764 566778889999
Q ss_pred cCCcchhhhcccccccccC
Q 018008 254 QGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 254 ~~~e~~~~~~~~i~~fl~~ 272 (362)
+++++|+.+++.+.+||+.
T Consensus 236 ~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eeccCHHHHHHHHHHHHhc
Confidence 9999999999999999964
No 24
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.89 E-value=1.4e-22 Score=179.84 Aligned_cols=214 Identities=21% Similarity=0.288 Sum_probs=150.8
Q ss_pred CCeeEEEEEcCCCCEEEEEEEeCC-CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccc--
Q 018008 42 DDVDVLKLSTKKGNEIVAMYVKNP-SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQD-- 118 (362)
Q Consensus 42 ~~~~~~~i~~~~g~~l~~~~~~~~-~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~-- 118 (362)
...+.+.+. ++..+........ ..+.++|++||+|++.+.|..-+..++. ..+|+++|++|+|.|+.+.-..+
T Consensus 65 ~~~~~v~i~--~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~ 140 (365)
T KOG4409|consen 65 YSKKYVRIP--NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPT 140 (365)
T ss_pred cceeeeecC--CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcc
Confidence 334444443 5555555444443 5678999999999999999999999966 77889999999999986433222
Q ss_pred -hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch-------------------
Q 018008 119 -TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR------------------- 177 (362)
Q Consensus 119 -~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~------------------- 177 (362)
....+.+.++......++ .+.+|+|||+||+++..+|..+|+ |+.+||++|+-=..+
T Consensus 141 ~~e~~fvesiE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~ 218 (365)
T KOG4409|consen 141 TAEKEFVESIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALF 218 (365)
T ss_pred cchHHHHHHHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhh
Confidence 224566677777778888 899999999999999999999995 999999998531110
Q ss_pred -------------hcccccc----ccccccc------------------------------------------cccCCCC
Q 018008 178 -------------VMYPVKR----TFWFDIY------------------------------------------KNIDKIP 198 (362)
Q Consensus 178 -------------~~~~~~~----~~~~~~~------------------------------------------~~~~~~~ 198 (362)
.+-|+.. .+..+.+ .-++.+.
T Consensus 219 ~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~ 298 (365)
T KOG4409|consen 219 LVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLR 298 (365)
T ss_pred hhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHH
Confidence 0000000 0000000 0011222
Q ss_pred CC--CCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 199 LV--ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 199 ~i--~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
.+ .||+++|+|++| +++...+.++...+.. .|+..++++++||...+++|+.|++.+.++++.
T Consensus 299 ~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~----------~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 299 ELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMK----------EYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred hhccCCCEEEEecCcc-cccchhHHHHHHHhhc----------ccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 23 599999999998 7777777777776432 256778888889999999999999999888753
No 25
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=7.1e-22 Score=186.38 Aligned_cols=215 Identities=20% Similarity=0.273 Sum_probs=150.8
Q ss_pred eeEEEEEcCCCCEEEEEEEeCC--CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCcc----
Q 018008 44 VDVLKLSTKKGNEIVAMYVKNP--SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQ---- 117 (362)
Q Consensus 44 ~~~~~i~~~~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~---- 117 (362)
.....+..+++..+.+..+.+. ..+++|||+||++++...|..++..+ .+.||.|+++|++|||.|.+.....
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L-~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQL-TSCGFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHH-HHCCCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 5667778888888887766553 45689999999998876666666655 6779999999999999998653322
Q ss_pred chHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC----CccEEEEcCCccccchh-------------cc
Q 018008 118 DTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP----RLRAVILHSPILSGLRV-------------MY 180 (362)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p----~v~~~vl~~p~~~~~~~-------------~~ 180 (362)
...+|+...++.+...+. ..+++++||||||.+++.++. +| .++++|+.+|++..... ..
T Consensus 189 ~~~~Dl~~~l~~l~~~~~--~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 189 YVVEDTEAFLEKIRSENP--GVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHhCC--CCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 234566666776665543 258999999999999998765 44 48999999997532100 00
Q ss_pred c---c----------cc------ccccccc---------------c----ccCCCCCCCCCEEEEEeCCCCCCCchhHHH
Q 018008 181 P---V----------KR------TFWFDIY---------------K----NIDKIPLVECPVLVIHGTEDEVVDFSHGKQ 222 (362)
Q Consensus 181 ~---~----------~~------~~~~~~~---------------~----~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~ 222 (362)
+ . .. ..+.+.. . ....+..+++|+|+++|++|.++|++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 0 0 00 0000000 0 123456789999999999999999999999
Q ss_pred HHHHhccCcceEEeCCCCcCccccCCCCCcccCCc-chhhhcccccccccC
Q 018008 223 LWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSD-QQENQRNNTEQKTEK 272 (362)
Q Consensus 223 l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e-~~~~~~~~i~~fl~~ 272 (362)
+++.+... +..+..+++++|....| .++++++.+.+||+.
T Consensus 346 l~~~~~~~----------~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 346 LYNEAASR----------HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred HHHhcCCC----------CceEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 99987642 23344556666666555 688899999999974
No 26
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=5.9e-22 Score=188.35 Aligned_cols=216 Identities=17% Similarity=0.156 Sum_probs=150.0
Q ss_pred CCeeEEEEEcCCCCEEEEEEEeCC--CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccch
Q 018008 42 DDVDVLKLSTKKGNEIVAMYVKNP--SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDT 119 (362)
Q Consensus 42 ~~~~~~~i~~~~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~ 119 (362)
..++.+.|++.+|..+.++++.+. ++.|+||++||+++....++..+...+...||+|+++|+||+|.|.+.+.....
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~ 245 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDS 245 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccH
Confidence 458899999999988888876553 356777777777765444454555555788999999999999999753322222
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccchhcc------c-cccccc----
Q 018008 120 YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGLRVMY------P-VKRTFW---- 187 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~~~~------~-~~~~~~---- 187 (362)
......+++++.....++.++++++|||+||++++.+|...| +|+++|+++|....+.... + .....+
T Consensus 246 ~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~l 325 (414)
T PRK05077 246 SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRL 325 (414)
T ss_pred HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHh
Confidence 233356677776665567789999999999999999999888 6999999998764221000 0 000000
Q ss_pred -------------ccccc--ccCCC-CCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCC
Q 018008 188 -------------FDIYK--NIDKI-PLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENV 251 (362)
Q Consensus 188 -------------~~~~~--~~~~~-~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~ 251 (362)
...+. ....+ .++++|+|+|+|++|+++|.+.++.+.+..++ ..+..+++.
T Consensus 326 g~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~------------~~l~~i~~~- 392 (414)
T PRK05077 326 GMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD------------GKLLEIPFK- 392 (414)
T ss_pred CCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC------------CeEEEccCC-
Confidence 00010 11112 46889999999999999999999988877653 344555553
Q ss_pred cccCCcchhhhcccccccccC
Q 018008 252 SEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 252 H~~~~e~~~~~~~~i~~fl~~ 272 (362)
++.+.++++++.+.+||+.
T Consensus 393 --~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 393 --PVYRNFDKALQEISDWLED 411 (414)
T ss_pred --CccCCHHHHHHHHHHHHHH
Confidence 3456788899999999853
No 27
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.89 E-value=9e-23 Score=182.69 Aligned_cols=181 Identities=17% Similarity=0.134 Sum_probs=132.5
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEcc
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSV 148 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~ 148 (362)
|+|||+||++++...|..++..| .+ .|.|+++|+||||.|.... ....+++.+. +.+ +++ ++++++||||
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L-~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~---l~~-~~~--~~~~lvGhS~ 83 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEEL-SS-HFTLHLVDLPGFGRSRGFG--ALSLADMAEA---VLQ-QAP--DKAIWLGWSL 83 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHH-hc-CCEEEEecCCCCCCCCCCC--CCCHHHHHHH---HHh-cCC--CCeEEEEECH
Confidence 47999999999998888877777 33 5999999999999997432 2344444443 333 344 7899999999
Q ss_pred chHHHHHHHHhCCC-ccEEEEcCCccccc--------h---------hcc----cccccc-----------------cc-
Q 018008 149 GSGPTLELAVRLPR-LRAVILHSPILSGL--------R---------VMY----PVKRTF-----------------WF- 188 (362)
Q Consensus 149 Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~--------~---------~~~----~~~~~~-----------------~~- 188 (362)
||.+++.+|...|+ |+++|++++..... . .+. .....+ +.
T Consensus 84 Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
T PRK10349 84 GGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKK 163 (256)
T ss_pred HHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 99999999999995 99999998632100 0 000 000000 00
Q ss_pred --------------------ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCC
Q 018008 189 --------------------DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYP 248 (362)
Q Consensus 189 --------------------~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~ 248 (362)
..++..+.+.++++|+|+|+|++|.++|.+.++.+.+.+++ +.+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~------------~~~~~i~ 231 (256)
T PRK10349 164 TVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH------------SESYIFA 231 (256)
T ss_pred HhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC------------CeEEEeC
Confidence 00111234567899999999999999999888888887764 6778889
Q ss_pred CCCcccCCcchhhhccccccccc
Q 018008 249 ENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 249 ~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
++||++++|+|+.|++.+.+|-+
T Consensus 232 ~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 232 KAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHHhc
Confidence 99999999999999999888754
No 28
>PRK06489 hypothetical protein; Provisional
Probab=99.88 E-value=2.2e-22 Score=189.10 Aligned_cols=191 Identities=20% Similarity=0.209 Sum_probs=133.4
Q ss_pred CeEEEEeCCCcCChhchH-HHH-HHHH------HhcCeEEEEEccCCCcCCCCCCCc------cchHHHHHHHHHH-HHH
Q 018008 68 SLTVLYSHGNAADLGQMC-PIF-TELS------VHLNVSLMGYDYSGYGHSSGKPSE------QDTYADIEAAYKC-LEE 132 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~-~~~-~~l~------~~~g~~vi~~D~~G~G~s~~~~~~------~~~~~d~~~~i~~-l~~ 132 (362)
+|+|||+||++++...|+ ..+ ..+. ...+|.|+++|+||||.|..+... .+.++++.+.+.. +.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 689999999999877765 233 3331 135799999999999999743221 3466777655544 567
Q ss_pred HhCCCCCcEE-EEEEccchHHHHHHHHhCCC-ccEEEEcCCcccc-------chh--------cc-------cccc----
Q 018008 133 TYGVKEEDII-LYGQSVGSGPTLELAVRLPR-LRAVILHSPILSG-------LRV--------MY-------PVKR---- 184 (362)
Q Consensus 133 ~~~~~~~~i~-l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~-------~~~--------~~-------~~~~---- 184 (362)
++++ +++. ++||||||++++.++.++|+ |+++|++++.... ... .. ....
T Consensus 149 ~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T PRK06489 149 GLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLK 226 (360)
T ss_pred hcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence 7887 6774 89999999999999999995 9999998764210 000 00 0000
Q ss_pred --------------------cc-------ccc----------------------cccccCCCCCCCCCEEEEEeCCCCCC
Q 018008 185 --------------------TF-------WFD----------------------IYKNIDKIPLVECPVLVIHGTEDEVV 215 (362)
Q Consensus 185 --------------------~~-------~~~----------------------~~~~~~~~~~i~~P~lvi~G~~D~~v 215 (362)
.. +.. .++..+.+.++++|+|+|+|++|.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~ 306 (360)
T PRK06489 227 RANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERN 306 (360)
T ss_pred HHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCccc
Confidence 00 000 00112234578999999999999999
Q ss_pred CchhH--HHHHHHhccCcceEEeCCCCcCccccCCC----CCcccCCcchhhhcccccccccCC
Q 018008 216 DFSHG--KQLWELCKDKYEPLWLKGGNHCNLELYPE----NVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 216 ~~~~~--~~l~~~~~~~~~~~~i~g~~h~~~~~~~~----~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
|++.+ +.+.+.+++ ..+.++++ +||.++ ++|+.|++.|.+||+..
T Consensus 307 p~~~~~~~~la~~ip~------------a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 307 PPETGVMEAALKRVKH------------GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred ChhhHHHHHHHHhCcC------------CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 98875 677777764 45566666 499887 89999999999999753
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.88 E-value=1.7e-22 Score=178.52 Aligned_cols=188 Identities=18% Similarity=0.213 Sum_probs=139.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
.+|+||++||++.+...|...+..+ . .||.|+++|+||||.|... .....++++.+.+..+++.++. ++++++||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l-~-~~~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~i~~~~~--~~v~liG~ 86 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPAL-T-PDFRVLRYDKRGHGLSDAP-EGPYSIEDLADDVLALLDHLGI--ERAVFCGL 86 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHh-h-cccEEEEecCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhCC--CceEEEEe
Confidence 6789999999999887777766655 3 4899999999999998643 3345677888888888888766 78999999
Q ss_pred ccchHHHHHHHHhCCC-ccEEEEcCCccccch----------------------hcccc-ccc----------ccc----
Q 018008 147 SVGSGPTLELAVRLPR-LRAVILHSPILSGLR----------------------VMYPV-KRT----------FWF---- 188 (362)
Q Consensus 147 S~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~----------------------~~~~~-~~~----------~~~---- 188 (362)
|+||.+++.+|...|+ ++++|++++...... .+... ... .+.
T Consensus 87 S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (251)
T TIGR02427 87 SLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLV 166 (251)
T ss_pred CchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHH
Confidence 9999999999999884 999998876432100 00000 000 000
Q ss_pred --------------ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCccc
Q 018008 189 --------------DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQ 254 (362)
Q Consensus 189 --------------~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~ 254 (362)
...+....+.++++|+++++|++|.+++.+..+.+.+.+++ ..+..+++++|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~ 234 (251)
T TIGR02427 167 RQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG------------ARFAEIRGAGHIP 234 (251)
T ss_pred hcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC------------ceEEEECCCCCcc
Confidence 00011233556789999999999999999988888877653 4556777788888
Q ss_pred CCcchhhhccccccccc
Q 018008 255 GSDQQENQRNNTEQKTE 271 (362)
Q Consensus 255 ~~e~~~~~~~~i~~fl~ 271 (362)
++++|+.+.+.+.+|+.
T Consensus 235 ~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 235 CVEQPEAFNAALRDFLR 251 (251)
T ss_pred cccChHHHHHHHHHHhC
Confidence 99999999999988873
No 30
>PLN02578 hydrolase
Probab=99.88 E-value=7.6e-22 Score=184.96 Aligned_cols=199 Identities=18% Similarity=0.193 Sum_probs=142.4
Q ss_pred CCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHH
Q 018008 52 KKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLE 131 (362)
Q Consensus 52 ~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~ 131 (362)
.+|..+.+.. .+.+++||++||++++...|...+..+. + +|.|+++|++|||.|.... ..+..+++.+.+..++
T Consensus 73 ~~~~~i~Y~~---~g~g~~vvliHG~~~~~~~w~~~~~~l~-~-~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i 146 (354)
T PLN02578 73 WRGHKIHYVV---QGEGLPIVLIHGFGASAFHWRYNIPELA-K-KYKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFV 146 (354)
T ss_pred ECCEEEEEEE---cCCCCeEEEECCCCCCHHHHHHHHHHHh-c-CCEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHH
Confidence 3465555332 2356789999999999888888877773 3 6999999999999998543 3445555556666666
Q ss_pred HHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc-----------------h--hcccc---------
Q 018008 132 ETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL-----------------R--VMYPV--------- 182 (362)
Q Consensus 132 ~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~-----------------~--~~~~~--------- 182 (362)
+..+. ++++++|||+||.+++.+|.++|+ |+++|++++..... . ...+.
T Consensus 147 ~~~~~--~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
T PLN02578 147 KEVVK--EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVL 224 (354)
T ss_pred HHhcc--CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHH
Confidence 66654 789999999999999999999995 99999987532100 0 00000
Q ss_pred ---------------------cc-----ccc-----------------cc----------cccccCCCCCCCCCEEEEEe
Q 018008 183 ---------------------KR-----TFW-----------------FD----------IYKNIDKIPLVECPVLVIHG 209 (362)
Q Consensus 183 ---------------------~~-----~~~-----------------~~----------~~~~~~~~~~i~~P~lvi~G 209 (362)
.. .++ .. .+...+.++++++|+++|+|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 304 (354)
T PLN02578 225 GFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWG 304 (354)
T ss_pred HHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEe
Confidence 00 000 00 00011234678999999999
Q ss_pred CCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 210 TEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 210 ~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
++|.+++.+.++++.+.+++ ..+..+ ++||+++.|+|++|++.|.+|++
T Consensus 305 ~~D~~v~~~~~~~l~~~~p~------------a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 305 DLDPWVGPAKAEKIKAFYPD------------TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCCHHHHHHHHHhCCC------------CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999988888764 445555 47999999999999999999985
No 31
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.88 E-value=2.9e-21 Score=175.54 Aligned_cols=221 Identities=21% Similarity=0.269 Sum_probs=157.9
Q ss_pred CCeeEEEEEcCCCCEEEEEEEeCCCCC-eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCC-CCCCccch
Q 018008 42 DDVDVLKLSTKKGNEIVAMYVKNPSAS-LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSS-GKPSEQDT 119 (362)
Q Consensus 42 ~~~~~~~i~~~~g~~l~~~~~~~~~~~-p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~-~~~~~~~~ 119 (362)
....+..+.+.+|..+.+..+..+.+. .+||++||.+.+...|.+++..+ ...||.|+++|+||||.|. +.......
T Consensus 7 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l-~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 7 RTRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDL-AARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred cccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHH-HhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 345566778889999988877776444 89999999999998888877777 7779999999999999997 55555555
Q ss_pred HHHHHHHHHHHHHHhC--CCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccch--hc---------------
Q 018008 120 YADIEAAYKCLEETYG--VKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGLR--VM--------------- 179 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~--~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~--~~--------------- 179 (362)
++++..++..+.+... ....+++|+||||||.+++.++.+.+ .|+++|+.+|++.... ..
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIR 165 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccc
Confidence 6666666666665543 23479999999999999999999998 5999999999876441 00
Q ss_pred --ccccc-------ccccc--------------------------cc----c--ccCCCCCCCCCEEEEEeCCCCCCC-c
Q 018008 180 --YPVKR-------TFWFD--------------------------IY----K--NIDKIPLVECPVLVIHGTEDEVVD-F 217 (362)
Q Consensus 180 --~~~~~-------~~~~~--------------------------~~----~--~~~~~~~i~~P~lvi~G~~D~~v~-~ 217 (362)
.+... ..+.. .+ . .......+++|+|+++|++|.+++ .
T Consensus 166 p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 166 PKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred cccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCc
Confidence 00010 00000 00 0 122345678999999999999999 6
Q ss_pred hhHHHHHHHhccC-cceEEeCCCCcCccccCCCCCcccCCcc-h--hhhcccccccccCCC
Q 018008 218 SHGKQLWELCKDK-YEPLWLKGGNHCNLELYPENVSEQGSDQ-Q--ENQRNNTEQKTEKLR 274 (362)
Q Consensus 218 ~~~~~l~~~~~~~-~~~~~i~g~~h~~~~~~~~~~H~~~~e~-~--~~~~~~i~~fl~~~~ 274 (362)
+...++++.+... .++..++|+ .|....|. . +++.+.+.+|+.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~-----------~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGA-----------YHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCc-----------chhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 8888888887764 344445554 44444332 2 567788888887543
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.87 E-value=3.8e-21 Score=173.69 Aligned_cols=201 Identities=12% Similarity=0.099 Sum_probs=142.3
Q ss_pred CCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHH
Q 018008 53 KGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEE 132 (362)
Q Consensus 53 ~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~ 132 (362)
+|.++. |..+.+.+|+|||+||++.+...|..+...| .+.||.|+++|+||||.|...+.....+++..+.+..+++
T Consensus 5 ~~~~~~--~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L-~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 5 NGEEVT--DMKPNRQPPHFVLIHGISGGSWCWYKIRCLM-ENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccc--cccccCCCCeEEEECCCCCCcCcHHHHHHHH-HhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHH
Confidence 455543 5556677899999999999887777776655 6679999999999999876444334567777777777777
Q ss_pred HhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc--cchh------cc-------cc-----c-------c
Q 018008 133 TYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS--GLRV------MY-------PV-----K-------R 184 (362)
Q Consensus 133 ~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~--~~~~------~~-------~~-----~-------~ 184 (362)
..+. .++++|+||||||.++..++..+|+ |+++|++++... +... .. .. . .
T Consensus 82 ~l~~-~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T PLN02211 82 SLPE-NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPT 160 (273)
T ss_pred hcCC-CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCc
Confidence 6531 2799999999999999999998884 999999977432 1000 00 00 0 0
Q ss_pred cccc----------c--------------------cccc---cCCCCCC-CCCEEEEEeCCCCCCCchhHHHHHHHhccC
Q 018008 185 TFWF----------D--------------------IYKN---IDKIPLV-ECPVLVIHGTEDEVVDFSHGKQLWELCKDK 230 (362)
Q Consensus 185 ~~~~----------~--------------------~~~~---~~~~~~i-~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~ 230 (362)
.... . .+.. .+....+ ++|+++|.|++|..+|++..+.+.+.++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~- 239 (273)
T PLN02211 161 SAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPP- 239 (273)
T ss_pred eeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCc-
Confidence 0000 0 0000 0112234 78999999999999999999999988764
Q ss_pred cceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccc
Q 018008 231 YEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKT 270 (362)
Q Consensus 231 ~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl 270 (362)
..+..++ +||.+++++|+++++.|.++.
T Consensus 240 -----------~~~~~l~-~gH~p~ls~P~~~~~~i~~~a 267 (273)
T PLN02211 240 -----------SQVYELE-SDHSPFFSTPFLLFGLLIKAA 267 (273)
T ss_pred -----------cEEEEEC-CCCCccccCHHHHHHHHHHHH
Confidence 3455554 799999999999988887764
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=5e-21 Score=181.80 Aligned_cols=201 Identities=17% Similarity=0.184 Sum_probs=139.2
Q ss_pred EEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchH----HHHHHHHHHHH
Q 018008 56 EIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTY----ADIEAAYKCLE 131 (362)
Q Consensus 56 ~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~----~d~~~~i~~l~ 131 (362)
.+...++.+++.+|+||++||++.+...|...+..+. + +|.|+++|+||||.|.......... +.+.+.+..++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~-~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALA-S-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHH-h-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH
Confidence 5555666666677999999999998888888777763 3 5999999999999997543211111 22344455556
Q ss_pred HHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch------------h---------c----------
Q 018008 132 ETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR------------V---------M---------- 179 (362)
Q Consensus 132 ~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~------------~---------~---------- 179 (362)
+..++ ++++|+||||||++++.++.++|+ |+++|+++|..-... . .
T Consensus 171 ~~l~~--~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 248 (402)
T PLN02894 171 KAKNL--SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKI 248 (402)
T ss_pred HHcCC--CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHH
Confidence 66666 789999999999999999999994 999999987421000 0 0
Q ss_pred ----cc--------ccccc-----------------ccc--------------------------cccccCCCCCCCCCE
Q 018008 180 ----YP--------VKRTF-----------------WFD--------------------------IYKNIDKIPLVECPV 204 (362)
Q Consensus 180 ----~~--------~~~~~-----------------~~~--------------------------~~~~~~~~~~i~~P~ 204 (362)
.+ ..... +.+ ..+....+..+++|+
T Consensus 249 ~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~ 328 (402)
T PLN02894 249 IRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPT 328 (402)
T ss_pred HHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCE
Confidence 00 00000 000 001123456789999
Q ss_pred EEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 205 LVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 205 lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
++|+|++|.+. +.....+.+..+. +..+..++++||++++|+|+.|++.+.+|++.
T Consensus 329 liI~G~~D~i~-~~~~~~~~~~~~~-----------~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 329 TFIYGRHDWMN-YEGAVEARKRMKV-----------PCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred EEEEeCCCCCC-cHHHHHHHHHcCC-----------CCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 99999999765 4666666655543 35567778889999999999999999988763
No 34
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.87 E-value=1.1e-21 Score=173.84 Aligned_cols=180 Identities=14% Similarity=0.107 Sum_probs=132.0
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
+|+|||+||++++...|..++..+ . +|.|+++|+||||.|.... ...++++.+.+..+++++++ ++++++|||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~--~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~~~--~~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P--DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSYNI--LPYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C--CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHcCC--CCeEEEEEC
Confidence 578999999999998888887755 3 6999999999999998533 23677888888888888877 899999999
Q ss_pred cchHHHHHHHHhCC-C-ccEEEEcCCccccchh----------------cccc------------------cccc---cc
Q 018008 148 VGSGPTLELAVRLP-R-LRAVILHSPILSGLRV----------------MYPV------------------KRTF---WF 188 (362)
Q Consensus 148 ~Gg~ia~~~a~~~p-~-v~~~vl~~p~~~~~~~----------------~~~~------------------~~~~---~~ 188 (362)
|||.+++.++.++| + |++++++++....... +... .... +.
T Consensus 75 ~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (242)
T PRK11126 75 LGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLV 154 (242)
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHH
Confidence 99999999999985 4 9999998765321000 0000 0000 00
Q ss_pred c-c--------------------ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccC
Q 018008 189 D-I--------------------YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELY 247 (362)
Q Consensus 189 ~-~--------------------~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~ 247 (362)
. . .+..+.+.++++|+++++|++|+.+. .+.+.. +..+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~-------------~~~~~~i 216 (242)
T PRK11126 155 AKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL-------------ALPLHVI 216 (242)
T ss_pred HhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh-------------cCeEEEe
Confidence 0 0 00112455789999999999997542 222221 3677888
Q ss_pred CCCCcccCCcchhhhcccccccccC
Q 018008 248 PENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 248 ~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+++||+++.|+|++|++.|..|++.
T Consensus 217 ~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 217 PNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCCCCchhhhChHHHHHHHHHHHhh
Confidence 8999999999999999999999853
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.86 E-value=2.8e-21 Score=170.38 Aligned_cols=187 Identities=18% Similarity=0.193 Sum_probs=134.0
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-ccchHHHHHHH-HHHHHHHhCCCCCcEEEEE
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-EQDTYADIEAA-YKCLEETYGVKEEDIILYG 145 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~d~~~~-i~~l~~~~~~~~~~i~l~G 145 (362)
+|+||++||++++...|..++..+ . .||.|+++|+||+|.|..... ....++++.+. +..+.+.++. ++++++|
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L-~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELL-G-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI--EPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHh-c-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC--CeEEEEE
Confidence 478999999999988888777777 4 699999999999999975432 34456666666 7777777765 7999999
Q ss_pred EccchHHHHHHHHhCCC-ccEEEEcCCccccchh----------------cccc---------cccccccc---------
Q 018008 146 QSVGSGPTLELAVRLPR-LRAVILHSPILSGLRV----------------MYPV---------KRTFWFDI--------- 190 (362)
Q Consensus 146 hS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~----------------~~~~---------~~~~~~~~--------- 190 (362)
||+||.+++.++.++|+ |++++++++....... +... ....++..
T Consensus 77 ~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR03695 77 YSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQR 156 (251)
T ss_pred eccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHh
Confidence 99999999999999995 9999998875321100 0000 00000000
Q ss_pred ---------------------------ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCc
Q 018008 191 ---------------------------YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCN 243 (362)
Q Consensus 191 ---------------------------~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~ 243 (362)
......+..+++|+++++|++|..++ +..+.+.+.++ +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~------------~~~ 223 (251)
T TIGR03695 157 QALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP------------NLT 223 (251)
T ss_pred HHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC------------CCc
Confidence 00012345688999999999998663 44555544433 356
Q ss_pred cccCCCCCcccCCcchhhhccccccccc
Q 018008 244 LELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 244 ~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
+..++++||++++++|+.+++.+.+|++
T Consensus 224 ~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 224 LVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 6778888999999999999999998873
No 36
>PLN02511 hydrolase
Probab=99.86 E-value=7.4e-21 Score=179.94 Aligned_cols=215 Identities=13% Similarity=0.113 Sum_probs=146.0
Q ss_pred CeeEEEEEcCCCCEEEEEEEe-----CCCCCeEEEEeCCCcCChhc-hHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-
Q 018008 43 DVDVLKLSTKKGNEIVAMYVK-----NPSASLTVLYSHGNAADLGQ-MCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS- 115 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~-----~~~~~p~vv~lHG~~~~~~~-~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~- 115 (362)
.++...+.+.||..+...++. .+..+|+||++||++++... |...+...+...||+|+++|+||||.|.....
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~ 149 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ 149 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC
Confidence 455667889999888754443 23457899999999876543 54434343467799999999999999874321
Q ss_pred --ccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC---ccEEEEcCCccccc----------hh--
Q 018008 116 --EQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR---LRAVILHSPILSGL----------RV-- 178 (362)
Q Consensus 116 --~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~---v~~~vl~~p~~~~~----------~~-- 178 (362)
.....+|+.++++++..+++. .+++++||||||.+++.++.++++ |.+++++++..+.. ..
T Consensus 150 ~~~~~~~~Dl~~~i~~l~~~~~~--~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y 227 (388)
T PLN02511 150 FYSASFTGDLRQVVDHVAGRYPS--ANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVY 227 (388)
T ss_pred EEcCCchHHHHHHHHHHHHHCCC--CCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHH
Confidence 234578999999999888753 789999999999999999999883 78887776543210 00
Q ss_pred ---c-------cc-----c---cccc-------------ccc-----------------cccccCCCCCCCCCEEEEEeC
Q 018008 179 ---M-------YP-----V---KRTF-------------WFD-----------------IYKNIDKIPLVECPVLVIHGT 210 (362)
Q Consensus 179 ---~-------~~-----~---~~~~-------------~~~-----------------~~~~~~~~~~i~~P~lvi~G~ 210 (362)
+ .. . ...+ +.+ ..+....++.+++|+|+|+|.
T Consensus 228 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~ 307 (388)
T PLN02511 228 DKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAA 307 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcC
Confidence 0 00 0 0000 000 001234667899999999999
Q ss_pred CCCCCCchhH-HHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhh------hccccccccc
Q 018008 211 EDEVVDFSHG-KQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQEN------QRNNTEQKTE 271 (362)
Q Consensus 211 ~D~~v~~~~~-~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~------~~~~i~~fl~ 271 (362)
+|++++.+.. ....+..+ ++.+..++++||..++|.|+. +.+.+.+||+
T Consensus 308 dDpi~p~~~~~~~~~~~~p------------~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 308 NDPIAPARGIPREDIKANP------------NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred CCCcCCcccCcHhHHhcCC------------CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 9999998754 33333333 356666777777777777765 3677778885
No 37
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.86 E-value=7.1e-21 Score=178.56 Aligned_cols=202 Identities=16% Similarity=0.202 Sum_probs=147.9
Q ss_pred CCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC---ccchHHHHHHHHH
Q 018008 52 KKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS---EQDTYADIEAAYK 128 (362)
Q Consensus 52 ~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~---~~~~~~d~~~~i~ 128 (362)
.+|..+.+.. .++..+++|||+||++.+...|..++..+ .+ +|.|+++|+||||.|..... ..+.++++.+.+.
T Consensus 112 ~~~~~~~y~~-~G~~~~~~ivllHG~~~~~~~w~~~~~~L-~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~ 188 (383)
T PLN03084 112 SDLFRWFCVE-SGSNNNPPVLLIHGFPSQAYSYRKVLPVL-SK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLE 188 (383)
T ss_pred CCceEEEEEe-cCCCCCCeEEEECCCCCCHHHHHHHHHHH-hc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHH
Confidence 4455444222 22334689999999999988888887776 43 79999999999999985432 2467888999999
Q ss_pred HHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc----h----hc---------c--ccc-----
Q 018008 129 CLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL----R----VM---------Y--PVK----- 183 (362)
Q Consensus 129 ~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~----~----~~---------~--~~~----- 183 (362)
.+++++++ ++++|+|||+||.+++.++..+|+ |+++|+++|..... . .+ . +..
T Consensus 189 ~~i~~l~~--~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~ 266 (383)
T PLN03084 189 SLIDELKS--DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKA 266 (383)
T ss_pred HHHHHhCC--CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhh
Confidence 99999887 789999999999999999999995 99999999864210 0 00 0 000
Q ss_pred --c--c---------cccc--------------cccccC--------CC------CCCCCCEEEEEeCCCCCCCchhHHH
Q 018008 184 --R--T---------FWFD--------------IYKNID--------KI------PLVECPVLVIHGTEDEVVDFSHGKQ 222 (362)
Q Consensus 184 --~--~---------~~~~--------------~~~~~~--------~~------~~i~~P~lvi~G~~D~~v~~~~~~~ 222 (362)
. . .+.. .+.... .+ ..+++|+|+|+|+.|.+++.+..+.
T Consensus 267 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~ 346 (383)
T PLN03084 267 LTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED 346 (383)
T ss_pred hcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH
Confidence 0 0 0000 000000 01 2468999999999999999988887
Q ss_pred HHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 223 LWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 223 l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
+.+.. + ..+..++++||+++.|+|+++++.|.+||.
T Consensus 347 ~a~~~-~------------a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 347 FCKSS-Q------------HKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHhc-C------------CeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 77753 2 456778888999999999999999999885
No 38
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.86 E-value=2.4e-21 Score=170.65 Aligned_cols=181 Identities=18% Similarity=0.147 Sum_probs=130.4
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
.|+||++||++++...|..++..+ . .+|.|+++|+||+|.|.... ...++++.+ .+.+... ++++++|||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l-~-~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~---~~~~~~~---~~~~lvG~S 73 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEEL-S-AHFTLHLVDLPGHGRSRGFG--PLSLADAAE---AIAAQAP---DPAIWLGWS 73 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhh-c-cCeEEEEecCCcCccCCCCC--CcCHHHHHH---HHHHhCC---CCeEEEEEc
Confidence 378999999999988887777666 3 36999999999999987432 233444443 3444332 689999999
Q ss_pred cchHHHHHHHHhCCC-ccEEEEcCCcccc-----ch------h-------ccc-cc---ccc-----------------c
Q 018008 148 VGSGPTLELAVRLPR-LRAVILHSPILSG-----LR------V-------MYP-VK---RTF-----------------W 187 (362)
Q Consensus 148 ~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~-----~~------~-------~~~-~~---~~~-----------------~ 187 (362)
|||.+++.++.++|+ +.++|++++.... .. . +.. .. ..+ +
T Consensus 74 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (245)
T TIGR01738 74 LGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARAL 153 (245)
T ss_pred HHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 999999999999996 9999998764210 00 0 000 00 000 0
Q ss_pred cc---------------------cccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCcccc
Q 018008 188 FD---------------------IYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLEL 246 (362)
Q Consensus 188 ~~---------------------~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~ 246 (362)
.. ..+....+.++++|+++++|++|.+++.+..+.+.+.+++ ..+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~------------~~~~~ 221 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH------------SELYI 221 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC------------CeEEE
Confidence 00 0000123467899999999999999999988888877763 56677
Q ss_pred CCCCCcccCCcchhhhcccccccc
Q 018008 247 YPENVSEQGSDQQENQRNNTEQKT 270 (362)
Q Consensus 247 ~~~~~H~~~~e~~~~~~~~i~~fl 270 (362)
++++||++++|+|++|++.+.+|+
T Consensus 222 ~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 222 FAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred eCCCCCCccccCHHHHHHHHHhhC
Confidence 888899999999999999998885
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.85 E-value=9.5e-22 Score=170.80 Aligned_cols=178 Identities=23% Similarity=0.334 Sum_probs=135.5
Q ss_pred EEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-ccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccc
Q 018008 71 VLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-EQDTYADIEAAYKCLEETYGVKEEDIILYGQSVG 149 (362)
Q Consensus 71 vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~G 149 (362)
|||+||++++...|..++..+ . .||.|+++|+||+|.|..... ....+++..+.+..++++++. ++++++|||+|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l-~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~lvG~S~G 76 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEAL-A-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI--KKVILVGHSMG 76 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHH-H-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT--SSEEEEEETHH
T ss_pred eEEECCCCCCHHHHHHHHHHH-h-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc--ccccccccccc
Confidence 799999999998888888777 4 599999999999999986443 345678888888888898877 89999999999
Q ss_pred hHHHHHHHHhCCC-ccEEEEcCCccccchhc---------cc-----------ccccc--------------------cc
Q 018008 150 SGPTLELAVRLPR-LRAVILHSPILSGLRVM---------YP-----------VKRTF--------------------WF 188 (362)
Q Consensus 150 g~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~---------~~-----------~~~~~--------------------~~ 188 (362)
|.+++.++..+|+ |+++|+++|........ .. ..... +.
T Consensus 77 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (228)
T PF12697_consen 77 GMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALA 156 (228)
T ss_dssp HHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccc
Confidence 9999999999995 99999999887421100 00 00000 00
Q ss_pred -------ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhh
Q 018008 189 -------DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQEN 261 (362)
Q Consensus 189 -------~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~ 261 (362)
........++.+++|+++++|++|.+++.+..+.+.+.+++ +.+..++++||+.++++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~p~~ 224 (228)
T PF12697_consen 157 EYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN------------AELVVIPGAGHFLFLEQPDE 224 (228)
T ss_dssp HHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT------------EEEEEETTSSSTHHHHSHHH
T ss_pred cccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC------------CEEEEECCCCCccHHHCHHH
Confidence 00111234456789999999999999998888888887763 56677777888998999988
Q ss_pred hcc
Q 018008 262 QRN 264 (362)
Q Consensus 262 ~~~ 264 (362)
+++
T Consensus 225 ~~~ 227 (228)
T PF12697_consen 225 VAE 227 (228)
T ss_dssp HHH
T ss_pred Hhc
Confidence 864
No 40
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.85 E-value=2.3e-20 Score=152.05 Aligned_cols=145 Identities=28% Similarity=0.464 Sum_probs=116.9
Q ss_pred EEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccc
Q 018008 70 TVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVG 149 (362)
Q Consensus 70 ~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~G 149 (362)
+||++||++.+...|......+ .+.||.|+.+|+|++|.+. ...++.++++.+.+... +.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEAL-AEQGYAVVAFDYPGHGDSD-------GADAVERVLADIRAGYP-DPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHH-HHTTEEEEEESCTTSTTSH-------HSHHHHHHHHHHHHHHC-TCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHH-HHCCCEEEEEecCCCCccc-------hhHHHHHHHHHHHhhcC-CCCcEEEEEEccC
Confidence 6899999999987776666655 6669999999999998873 22256666666544444 5689999999999
Q ss_pred hHHHHHHHHhCCCccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 150 SGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 150 g~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
|.+++.++.+.++++++|+++|+.+ .+.+...+.|+++++|++|+.++.+..+++++.++.
T Consensus 72 g~~a~~~~~~~~~v~~~v~~~~~~~-------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~ 132 (145)
T PF12695_consen 72 GAIAANLAARNPRVKAVVLLSPYPD-------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPG 132 (145)
T ss_dssp HHHHHHHHHHSTTESEEEEESESSG-------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCS
T ss_pred cHHHHHHhhhccceeEEEEecCccc-------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCC
Confidence 9999999999888999999998411 233456678999999999999999999999999997
Q ss_pred CcceEEeCCCCcC
Q 018008 230 KYEPLWLKGGNHC 242 (362)
Q Consensus 230 ~~~~~~i~g~~h~ 242 (362)
+.++++++|++|+
T Consensus 133 ~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 133 PKELYIIPGAGHF 145 (145)
T ss_dssp SEEEEEETTS-TT
T ss_pred CcEEEEeCCCcCc
Confidence 7888999998884
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.85 E-value=5.4e-21 Score=180.42 Aligned_cols=187 Identities=24% Similarity=0.347 Sum_probs=138.3
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYG 145 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 145 (362)
+..++|||+||++++...|...+..+. . +|.|+++|+||||.|.... ....++++.+.+..+++.++. .+++|+|
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~-~-~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~lvG 203 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALA-A-GRPVIALDLPGHGASSKAV-GAGSLDELAAAVLAFLDALGI--ERAHLVG 203 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHh-c-CCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCC--ccEEEEe
Confidence 457899999999999888888877763 3 5999999999999996432 345677888888888888876 7899999
Q ss_pred EccchHHHHHHHHhCC-CccEEEEcCCccccchh-------c---------cc-----------ccccc-----------
Q 018008 146 QSVGSGPTLELAVRLP-RLRAVILHSPILSGLRV-------M---------YP-----------VKRTF----------- 186 (362)
Q Consensus 146 hS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~~-------~---------~~-----------~~~~~----------- 186 (362)
||+||.+++.++..+| ++.++|+++|....... + .. ....+
T Consensus 204 ~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (371)
T PRK14875 204 HSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLD 283 (371)
T ss_pred echHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccc
Confidence 9999999999999988 59999999875311100 0 00 00000
Q ss_pred ------------ccc----cccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCC
Q 018008 187 ------------WFD----IYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPEN 250 (362)
Q Consensus 187 ------------~~~----~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~ 250 (362)
++. .+.....+..+++|+|+++|++|.+++++.++.+. . +..+..++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~----~-----------~~~~~~~~~~ 348 (371)
T PRK14875 284 GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP----D-----------GVAVHVLPGA 348 (371)
T ss_pred cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc----C-----------CCeEEEeCCC
Confidence 000 00111234568999999999999999987664432 2 3566778888
Q ss_pred CcccCCcchhhhcccccccccC
Q 018008 251 VSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 251 ~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
||++++++|+++++.|.+||+.
T Consensus 349 gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 349 GHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCChhhhCHHHHHHHHHHHhcc
Confidence 9999999999999999999864
No 42
>PRK10566 esterase; Provisional
Probab=99.85 E-value=2.3e-20 Score=166.36 Aligned_cols=194 Identities=14% Similarity=0.144 Sum_probs=125.2
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCC-Cc---------cchHHHHHHHHHHHHHHhCC
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKP-SE---------QDTYADIEAAYKCLEETYGV 136 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~-~~---------~~~~~d~~~~i~~l~~~~~~ 136 (362)
+.|+||++||++++...|..+...+ .+.||.|+++|+||+|.+.... .. ....+|+..++.++.+...+
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l-~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVAL-AQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHH-HhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4689999999998876665554444 7789999999999999763211 11 12345666777777766556
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCCCccEEEEc-C-Cccccch-hccccccc-------c------ccccccccCCCCCC
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLPRLRAVILH-S-PILSGLR-VMYPVKRT-------F------WFDIYKNIDKIPLV 200 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~-~-p~~~~~~-~~~~~~~~-------~------~~~~~~~~~~~~~i 200 (362)
+.++++++|||+||.+++.++...|++.+.+.+ . ++..... ...+.... . ....++....+.++
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 184 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQL 184 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhhhc
Confidence 778999999999999999999998886655443 2 2221110 00000000 0 00112222334454
Q ss_pred -CCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 201 -ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 201 -~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
++|+|+++|++|.+++++.++.+.+.++.... ..+..+..+++.+|... ++. ...+.+||+
T Consensus 185 ~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------~~~~~~~~~~~~~H~~~---~~~-~~~~~~fl~ 246 (249)
T PRK10566 185 ADRPLLLWHGLADDVVPAAESLRLQQALRERGL------DKNLTCLWEPGVRHRIT---PEA-LDAGVAFFR 246 (249)
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------CcceEEEecCCCCCccC---HHH-HHHHHHHHH
Confidence 68999999999999999999999998875310 01234445566666542 233 366777775
No 43
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.85 E-value=6.9e-21 Score=178.38 Aligned_cols=205 Identities=17% Similarity=0.164 Sum_probs=143.6
Q ss_pred CCCEEEEEEEeCC--CCCeEEEEeCCCcCChhc----------hHHHHH---HHHHhcCeEEEEEccCC--CcCCCCC--
Q 018008 53 KGNEIVAMYVKNP--SASLTVLYSHGNAADLGQ----------MCPIFT---ELSVHLNVSLMGYDYSG--YGHSSGK-- 113 (362)
Q Consensus 53 ~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~~~----------~~~~~~---~l~~~~g~~vi~~D~~G--~G~s~~~-- 113 (362)
+|..+.+..+.++ ...++||++||++++... |+..+. ..+...+|.|+++|+|| ||.|.+.
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 4556665555432 346799999999987532 333332 12245689999999999 5554321
Q ss_pred --C-------CccchHHHHHHHHHHHHHHhCCCCCc-EEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch-----
Q 018008 114 --P-------SEQDTYADIEAAYKCLEETYGVKEED-IILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR----- 177 (362)
Q Consensus 114 --~-------~~~~~~~d~~~~i~~l~~~~~~~~~~-i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~----- 177 (362)
. ...+.++++.+.+..+++++++ ++ ++++||||||.+++.++.++|+ |+++|++++......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHH
Confidence 1 1135678999999999999988 77 9999999999999999999994 999999986532100
Q ss_pred ------hc----------c-----c------------------------ccc------------------cccc------
Q 018008 178 ------VM----------Y-----P------------------------VKR------------------TFWF------ 188 (362)
Q Consensus 178 ------~~----------~-----~------------------------~~~------------------~~~~------ 188 (362)
.. + + +.. ..+.
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 172 NEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 00 0 0 000 0000
Q ss_pred --c------------cccc----------cCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCcc
Q 018008 189 --D------------IYKN----------IDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNL 244 (362)
Q Consensus 189 --~------------~~~~----------~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~ 244 (362)
. .+.. .+.++.+++|+|+|+|++|.++|++.++.+.+.+++ ..+
T Consensus 252 ~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~------------~~~ 319 (351)
T TIGR01392 252 FVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA------------AGL 319 (351)
T ss_pred HHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh------------cCC
Confidence 0 0000 134557899999999999999999999999999875 232
Q ss_pred c-----cCCCCCcccCCcchhhhccccccccc
Q 018008 245 E-----LYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 245 ~-----~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
. +++++||.+++++|++|++.|.+||.
T Consensus 320 ~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 320 RVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred ceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 2 55788999999999999999999973
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.85 E-value=3.7e-20 Score=171.70 Aligned_cols=213 Identities=16% Similarity=0.202 Sum_probs=139.1
Q ss_pred EEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhc-h------------------------HHHHHHHHHhcCeEEEEEc
Q 018008 49 LSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQ-M------------------------CPIFTELSVHLNVSLMGYD 103 (362)
Q Consensus 49 i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~-~------------------------~~~~~~l~~~~g~~vi~~D 103 (362)
+.+.+|..|..+.+.++.++.+|+++||.+..... + ...+.+.+.+.||.|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 45678988888877777788999999999987751 1 1334555588899999999
Q ss_pred cCCCcCCCCCC---CccchH----HHHHHHHHHHHHHh-----------------CCC-CCcEEEEEEccchHHHHHHHH
Q 018008 104 YSGYGHSSGKP---SEQDTY----ADIEAAYKCLEETY-----------------GVK-EEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 104 ~~G~G~s~~~~---~~~~~~----~d~~~~i~~l~~~~-----------------~~~-~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
+||||.|.+.. .....+ +|+...++.+.+.. ..+ ..+++|+||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 99999988542 111234 44444444443310 011 368999999999999999886
Q ss_pred hCC---------CccEEEEcCCccccch---------------------hcccc---ccccccc------------cc--
Q 018008 159 RLP---------RLRAVILHSPILSGLR---------------------VMYPV---KRTFWFD------------IY-- 191 (362)
Q Consensus 159 ~~p---------~v~~~vl~~p~~~~~~---------------------~~~~~---~~~~~~~------------~~-- 191 (362)
..+ .++++|+++|++.... ...+. ....+.. .+
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRY 241 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCcccc
Confidence 542 3899998888642100 00000 0000000 00
Q ss_pred -------------cc----cCCCCCC--CCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCc
Q 018008 192 -------------KN----IDKIPLV--ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVS 252 (362)
Q Consensus 192 -------------~~----~~~~~~i--~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H 252 (362)
.. ...+..+ ++|+|+++|++|.+++++.++.+++.+... ...+..+++++|
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~----------~~~l~~~~g~~H 311 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS----------NKELHTLEDMDH 311 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCC----------CcEEEEECCCCC
Confidence 00 1123334 689999999999999999999988876532 234455666667
Q ss_pred ccCCcc-hhhhccccccccc
Q 018008 253 EQGSDQ-QENQRNNTEQKTE 271 (362)
Q Consensus 253 ~~~~e~-~~~~~~~i~~fl~ 271 (362)
..+.|. .+++.+.+.+||.
T Consensus 312 ~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 312 VITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCccCCCHHHHHHHHHHHhh
Confidence 766664 5677788888874
No 45
>PRK07581 hypothetical protein; Validated
Probab=99.85 E-value=6.7e-21 Score=177.72 Aligned_cols=192 Identities=15% Similarity=0.136 Sum_probs=132.9
Q ss_pred CCeEEEEeCCCcCChhchHHHHH--HHHHhcCeEEEEEccCCCcCCCCCCCc--cc---------hHHHHHHHHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFT--ELSVHLNVSLMGYDYSGYGHSSGKPSE--QD---------TYADIEAAYKCLEET 133 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~--~l~~~~g~~vi~~D~~G~G~s~~~~~~--~~---------~~~d~~~~i~~l~~~ 133 (362)
..|+||++||++++...|..++. ..+...+|.|+++|+||||.|..+... .+ ..+|+......++++
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 44677777777766544433321 123455899999999999999744321 11 235555555667788
Q ss_pred hCCCCCc-EEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch----------------------------------
Q 018008 134 YGVKEED-IILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR---------------------------------- 177 (362)
Q Consensus 134 ~~~~~~~-i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~---------------------------------- 177 (362)
+++ ++ ++|+||||||++++.+|.++|+ |+++|++++......
T Consensus 120 lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 197 (339)
T PRK07581 120 FGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRA 197 (339)
T ss_pred hCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHH
Confidence 888 78 5799999999999999999995 999999864321000
Q ss_pred ---hcc------cc-c------------cc----ccccc---------------c-------------cccCCCCCCCCC
Q 018008 178 ---VMY------PV-K------------RT----FWFDI---------------Y-------------KNIDKIPLVECP 203 (362)
Q Consensus 178 ---~~~------~~-~------------~~----~~~~~---------------~-------------~~~~~~~~i~~P 203 (362)
... .. . .. ++... + +....++++++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~P 277 (339)
T PRK07581 198 HARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAK 277 (339)
T ss_pred HHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCC
Confidence 000 00 0 00 00000 0 011234568999
Q ss_pred EEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCC-CCcccCCcchhhhcccccccccC
Q 018008 204 VLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPE-NVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 204 ~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~-~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+|+|+|++|..++++.++.+.+.+++ ..+..+++ +||..++++++.+...|.+||++
T Consensus 278 tLvI~G~~D~~~p~~~~~~l~~~ip~------------a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 278 TFVMPISTDLYFPPEDCEAEAALIPN------------AELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCC------------CeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 99999999999999999988888764 56677887 89999999999999999999864
No 46
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=8.9e-21 Score=177.05 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=137.8
Q ss_pred CCCEEEEEEEeCCCCCeEEEEeCCCcCChh------------chHHHHH---HHHHhcCeEEEEEccCCCcCCCCCCCcc
Q 018008 53 KGNEIVAMYVKNPSASLTVLYSHGNAADLG------------QMCPIFT---ELSVHLNVSLMGYDYSGYGHSSGKPSEQ 117 (362)
Q Consensus 53 ~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~------------~~~~~~~---~l~~~~g~~vi~~D~~G~G~s~~~~~~~ 117 (362)
+|..+.+... ++ .++++|++||++++.. .|..++. .| ...+|.|+++|+||||.|... .
T Consensus 44 ~~~~l~y~~~-G~-~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L-~~~~~~Vi~~Dl~G~g~s~~~---~ 117 (343)
T PRK08775 44 EDLRLRYELI-GP-AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRAL-DPARFRLLAFDFIGADGSLDV---P 117 (343)
T ss_pred CCceEEEEEe-cc-CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCcc-CccccEEEEEeCCCCCCCCCC---C
Confidence 5555543322 21 2334666766665544 3444553 23 334799999999999987522 3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCc-EEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccc------h----h-------
Q 018008 118 DTYADIEAAYKCLEETYGVKEED-IILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGL------R----V------- 178 (362)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~~~~-i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~------~----~------- 178 (362)
....+..+.+..+++.+++ ++ ++|+||||||++++.+|.++| .|+++|++++..... . .
T Consensus 118 ~~~~~~a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~ 195 (343)
T PRK08775 118 IDTADQADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQL 195 (343)
T ss_pred CCHHHHHHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCC
Confidence 4567788888888999887 55 479999999999999999999 599999998643110 0 0
Q ss_pred ---------------cccccc-----cccccc--------------------------------------cc-ccCCCCC
Q 018008 179 ---------------MYPVKR-----TFWFDI--------------------------------------YK-NIDKIPL 199 (362)
Q Consensus 179 ---------------~~~~~~-----~~~~~~--------------------------------------~~-~~~~~~~ 199 (362)
...... ..+... .. ....+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 275 (343)
T PRK08775 196 QCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEA 275 (343)
T ss_pred CCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhc
Confidence 000000 000000 00 0123567
Q ss_pred CCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCC-CCCcccCCcchhhhcccccccccCC
Q 018008 200 VECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYP-ENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 200 i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~-~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
+++|+|+|+|++|.++|++..+.+.+.+.. ...+..++ ++||++++|+|+.|++.+.+||+..
T Consensus 276 I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p-----------~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 276 IRVPTVVVAVEGDRLVPLADLVELAEGLGP-----------RGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred CCCCeEEEEeCCCEeeCHHHHHHHHHHcCC-----------CCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 899999999999999999999888888743 24566776 4899999999999999999999643
No 47
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.84 E-value=5.3e-20 Score=183.70 Aligned_cols=226 Identities=19% Similarity=0.200 Sum_probs=165.5
Q ss_pred CCCCeeEEEEEcCCCCEEEEEEEeCCCCC-----eEEEEeCCCcCChhc-hHHHHHHHHHhcCeEEEEEccCCCcC---C
Q 018008 40 QRDDVDVLKLSTKKGNEIVAMYVKNPSAS-----LTVLYSHGNAADLGQ-MCPIFTELSVHLNVSLMGYDYSGYGH---S 110 (362)
Q Consensus 40 ~~~~~~~~~i~~~~g~~l~~~~~~~~~~~-----p~vv~lHG~~~~~~~-~~~~~~~l~~~~g~~vi~~D~~G~G~---s 110 (362)
.....+.+++++.||.++.+|++.+++.. |+||++||++..... .+....+.+...||.|+.+|+||.+. .
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 34567889999999999999999886533 899999999744322 23344455588899999999997432 2
Q ss_pred C----CCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhcccccccc
Q 018008 111 S----GKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKRTF 186 (362)
Q Consensus 111 ~----~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~~~ 186 (362)
- ........++|+.+.++++.+.-.+|++++.++|||+||+++++++...|.+++.+...+..+.+..+......+
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~ 520 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGL 520 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhh
Confidence 1 112223467899999997766666788899999999999999999999998899888887665443332222111
Q ss_pred c----------------cccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCC
Q 018008 187 W----------------FDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPEN 250 (362)
Q Consensus 187 ~----------------~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~ 250 (362)
+ +....++..+.++++|+|+|||+.|..|+.+++.++.++++.+ +..+.+..+|+.
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~--------g~~~~~~~~p~e 592 (620)
T COG1506 521 RFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRK--------GKPVELVVFPDE 592 (620)
T ss_pred cCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHc--------CceEEEEEeCCC
Confidence 1 2233445566788999999999999999999999999999864 223566777777
Q ss_pred CcccCC-cchhhhcccccccccCC
Q 018008 251 VSEQGS-DQQENQRNNTEQKTEKL 273 (362)
Q Consensus 251 ~H~~~~-e~~~~~~~~i~~fl~~~ 273 (362)
+|+..- ++.....+.+.+|++..
T Consensus 593 ~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 593 GHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHH
Confidence 887655 44555667777777643
No 48
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.82 E-value=4.5e-20 Score=174.42 Aligned_cols=209 Identities=15% Similarity=0.112 Sum_probs=144.0
Q ss_pred CCEEEEEEEeC--CCCCeEEEEeCCCcCChhc-------------hHHHHH---HHHHhcCeEEEEEccCCC-cCCCCCC
Q 018008 54 GNEIVAMYVKN--PSASLTVLYSHGNAADLGQ-------------MCPIFT---ELSVHLNVSLMGYDYSGY-GHSSGKP 114 (362)
Q Consensus 54 g~~l~~~~~~~--~~~~p~vv~lHG~~~~~~~-------------~~~~~~---~l~~~~g~~vi~~D~~G~-G~s~~~~ 114 (362)
|..+.+..+.. ++.+|+||++||++++... |..++. .+ ...+|.|+++|++|+ |.|+++.
T Consensus 32 ~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l-~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 32 PVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPI-DTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCcc-CccceEEEeccCCCCCCCCCCCC
Confidence 34444443432 2236899999999998864 333331 23 245899999999983 5443221
Q ss_pred C-------------ccchHHHHHHHHHHHHHHhCCCCCc-EEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc---
Q 018008 115 S-------------EQDTYADIEAAYKCLEETYGVKEED-IILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL--- 176 (362)
Q Consensus 115 ~-------------~~~~~~d~~~~i~~l~~~~~~~~~~-i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~--- 176 (362)
. ..+.++++.+.+..+++++++ ++ ++++||||||.+++.++..+|+ |+++|++++.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 188 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN 188 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH
Confidence 0 145788999999999999988 77 5899999999999999999994 99999998643210
Q ss_pred --------hhc----------------cc------------------------cc-----cc--ccc-------------
Q 018008 177 --------RVM----------------YP------------------------VK-----RT--FWF------------- 188 (362)
Q Consensus 177 --------~~~----------------~~------------------------~~-----~~--~~~------------- 188 (362)
... .+ +. .. .+.
T Consensus 189 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 189 IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH
Confidence 000 00 00 00 000
Q ss_pred -----ccc---------------c--------ccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCC
Q 018008 189 -----DIY---------------K--------NIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGN 240 (362)
Q Consensus 189 -----~~~---------------~--------~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~ 240 (362)
..+ + ..+.+..+++|+|+|+|++|.++|++.++.+.+.+++. ..
T Consensus 269 ~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a--------~~ 340 (379)
T PRK00175 269 GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAA--------GA 340 (379)
T ss_pred HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhc--------CC
Confidence 000 0 01234678999999999999999999999999998752 00
Q ss_pred cCccccC-CCCCcccCCcchhhhcccccccccCC
Q 018008 241 HCNLELY-PENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 241 h~~~~~~-~~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
+..+.++ +++||.+++|+|++|++.|.+||+..
T Consensus 341 ~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 341 DVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred CeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 1244555 47999999999999999999999753
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.81 E-value=7.4e-19 Score=162.78 Aligned_cols=196 Identities=15% Similarity=0.153 Sum_probs=130.0
Q ss_pred EEEEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhc-hHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC---ccc
Q 018008 46 VLKLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQ-MCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS---EQD 118 (362)
Q Consensus 46 ~~~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~-~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~---~~~ 118 (362)
...+.+.||..+...+...+ ..+|+||++||++++... +...+...+.+.||+|+++|+||||.+..... ...
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~ 112 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG 112 (324)
T ss_pred eeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC
Confidence 34577889987765544322 356899999999876533 44434445578899999999999997753211 123
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-C--ccEEEEcCCccccchh----------cccc---
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-R--LRAVILHSPILSGLRV----------MYPV--- 182 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~--v~~~vl~~p~~~~~~~----------~~~~--- 182 (362)
..+|+..++.++.++++. .+++++||||||.+++.+++.++ + +.++|++++....... .+..
T Consensus 113 ~~~D~~~~i~~l~~~~~~--~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~ 190 (324)
T PRK10985 113 ETEDARFFLRWLQREFGH--VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLL 190 (324)
T ss_pred chHHHHHHHHHHHHhCCC--CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHH
Confidence 568999999999988765 78999999999998888887764 3 8888888876431100 0000
Q ss_pred ---c------cccccc-------------------------------------cccccCCCCCCCCCEEEEEeCCCCCCC
Q 018008 183 ---K------RTFWFD-------------------------------------IYKNIDKIPLVECPVLVIHGTEDEVVD 216 (362)
Q Consensus 183 ---~------~~~~~~-------------------------------------~~~~~~~~~~i~~P~lvi~G~~D~~v~ 216 (362)
. ...|.+ ..+..+.++.+++|+++|+|++|++++
T Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~ 270 (324)
T PRK10985 191 NLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMT 270 (324)
T ss_pred HHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCC
Confidence 0 000000 001124456789999999999999999
Q ss_pred chhHHHHHHHhccCcceEEeCCCCcCcc
Q 018008 217 FSHGKQLWELCKDKYEPLWLKGGNHCNL 244 (362)
Q Consensus 217 ~~~~~~l~~~~~~~~~~~~i~g~~h~~~ 244 (362)
.+....+.+.. .+.+...++++||+.+
T Consensus 271 ~~~~~~~~~~~-~~~~~~~~~~~GH~~~ 297 (324)
T PRK10985 271 HEVIPKPESLP-PNVEYQLTEHGGHVGF 297 (324)
T ss_pred hhhChHHHHhC-CCeEEEECCCCCceee
Confidence 88777665443 3345555566666443
No 50
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.81 E-value=2.1e-19 Score=149.47 Aligned_cols=188 Identities=21% Similarity=0.301 Sum_probs=139.0
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCC---CCCccchHHHHHHHHHHHHHHhCCCCCcEEEE
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSG---KPSEQDTYADIEAAYKCLEETYGVKEEDIILY 144 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~---~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~ 144 (362)
...||++||+.++..+...+...| .+.||.|.++.|||||.... ......+++++...+.+|.+. +. +.|.++
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L-~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy--~eI~v~ 90 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYL-NENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GY--DEIAVV 90 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHH-HHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CC--CeEEEE
Confidence 379999999999998877776666 78899999999999998762 334466888899999998854 33 899999
Q ss_pred EEccchHHHHHHHHhCCCccEEEEcCCccccchhc------c----------------------ccccccccc------c
Q 018008 145 GQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVM------Y----------------------PVKRTFWFD------I 190 (362)
Q Consensus 145 GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~------~----------------------~~~~~~~~~------~ 190 (362)
|.||||.+++.+|...| ++++|.+++........ . .+...++.. .
T Consensus 91 GlSmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~ 169 (243)
T COG1647 91 GLSMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKL 169 (243)
T ss_pred eecchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 99999999999999998 99999998765421100 0 000000000 0
Q ss_pred -ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc-CcceEEeCCCCcCccccCCCCCcccC-Ccchhhhccccc
Q 018008 191 -YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD-KYEPLWLKGGNHCNLELYPENVSEQG-SDQQENQRNNTE 267 (362)
Q Consensus 191 -~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~-~~~~~~i~g~~h~~~~~~~~~~H~~~-~e~~~~~~~~i~ 267 (362)
-.....+..|..|++++.|.+|+.+|.+.+.-+++.... .+++.|+++.+| ... -+..+.+.+.+.
T Consensus 170 i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgH-----------VIt~D~Erd~v~e~V~ 238 (243)
T COG1647 170 IKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGH-----------VITLDKERDQVEEDVI 238 (243)
T ss_pred HHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCc-----------eeecchhHHHHHHHHH
Confidence 012345667889999999999999999999999998865 356666666655 322 244566778888
Q ss_pred cccc
Q 018008 268 QKTE 271 (362)
Q Consensus 268 ~fl~ 271 (362)
.||+
T Consensus 239 ~FL~ 242 (243)
T COG1647 239 TFLE 242 (243)
T ss_pred HHhh
Confidence 8875
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.81 E-value=1.1e-18 Score=157.65 Aligned_cols=212 Identities=17% Similarity=0.211 Sum_probs=135.1
Q ss_pred EEEEEcCCCCEEEEEEEeCCC-CCeEEEEeCCCcCCh-hch--HHHHHHHHHhcCeEEEEEccCCCcCCCCCC-CccchH
Q 018008 46 VLKLSTKKGNEIVAMYVKNPS-ASLTVLYSHGNAADL-GQM--CPIFTELSVHLNVSLMGYDYSGYGHSSGKP-SEQDTY 120 (362)
Q Consensus 46 ~~~i~~~~g~~l~~~~~~~~~-~~p~vv~lHG~~~~~-~~~--~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~ 120 (362)
.+.+.+ +|..+.+++..+.+ .++.||++||+.... +.+ +..+.+.+.+.||.|+++|++|||.|.+.. ......
T Consensus 4 ~~~~~~-~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~ 82 (274)
T TIGR03100 4 ALTFSC-EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGID 82 (274)
T ss_pred eEEEEc-CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHH
Confidence 345544 46677776665443 456788788765322 122 223344447789999999999999987542 233455
Q ss_pred HHHHHHHHHHHHHh-CCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhccc-----------ccccccc
Q 018008 121 ADIEAAYKCLEETY-GVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYP-----------VKRTFWF 188 (362)
Q Consensus 121 ~d~~~~i~~l~~~~-~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~-----------~~~~~~~ 188 (362)
+|+.++++++.+.. +. ++++++|||+||.+++.++...+.|+++|+++|++........ ....+|.
T Consensus 83 ~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWR 160 (274)
T ss_pred HHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHH
Confidence 78888888887764 44 6799999999999999998766679999999998643210000 0001111
Q ss_pred cc--------------------ccc--------------cCCCCCCCCCEEEEEeCCCCCCCchhH------HHHHHHhc
Q 018008 189 DI--------------------YKN--------------IDKIPLVECPVLVIHGTEDEVVDFSHG------KQLWELCK 228 (362)
Q Consensus 189 ~~--------------------~~~--------------~~~~~~i~~P~lvi~G~~D~~v~~~~~------~~l~~~~~ 228 (362)
.. +.. ...+..+++|+|+++|..|...+ ... ..+.+.+.
T Consensus 161 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~ 239 (274)
T TIGR03100 161 KLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALE 239 (274)
T ss_pred HhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhh
Confidence 00 000 11233568999999999998753 211 23333332
Q ss_pred cCcceEEeCCCCcCccccCCCCCcccCCcc-hhhhccccccccc
Q 018008 229 DKYEPLWLKGGNHCNLELYPENVSEQGSDQ-QENQRNNTEQKTE 271 (362)
Q Consensus 229 ~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~-~~~~~~~i~~fl~ 271 (362)
. .+..+..+++++|....+. ++++.+.|.+||+
T Consensus 240 ~----------~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 240 D----------PGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred c----------CCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 1 1455667777788774444 4888899999984
No 52
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.81 E-value=6.7e-19 Score=161.86 Aligned_cols=122 Identities=20% Similarity=0.259 Sum_probs=91.2
Q ss_pred EEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-ccchHHHHHH
Q 018008 47 LKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-EQDTYADIEA 125 (362)
Q Consensus 47 ~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~d~~~ 125 (362)
..+...+|..+.+.... +...++||++||++++... .... ..+...+|.|+++|+||||.|.+... .....+++.+
T Consensus 7 ~~~~~~~~~~l~y~~~g-~~~~~~lvllHG~~~~~~~-~~~~-~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSG-NPDGKPVVFLHGGPGSGTD-PGCR-RFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred CeEEcCCCcEEEEEECc-CCCCCEEEEECCCCCCCCC-HHHH-hccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 35556677777654432 2235689999998776433 2232 23344689999999999999985432 2345678888
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCcc
Q 018008 126 AYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPIL 173 (362)
Q Consensus 126 ~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~ 173 (362)
.+..+++++++ ++++++||||||.+++.++.++|+ |+++|++++..
T Consensus 84 dl~~l~~~l~~--~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 84 DIEKLREKLGI--KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHcCC--CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 88889988887 789999999999999999999995 99999988643
No 53
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.80 E-value=4.1e-19 Score=193.05 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=145.0
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCC-------CccchHHHHHHHHHHHHHHhCCCCC
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKP-------SEQDTYADIEAAYKCLEETYGVKEE 139 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~-------~~~~~~~d~~~~i~~l~~~~~~~~~ 139 (362)
.+++|||+||++++...|..++..+. . +|.|+++|+||||.|.... .....++++.+.+..+++++++ +
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~-~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~--~ 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAIS-G-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP--G 1445 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-C-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC--C
Confidence 46899999999999988888877763 3 5899999999999987432 1234577888888888888776 8
Q ss_pred cEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc----------------hhccc---------c-cccccc----
Q 018008 140 DIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL----------------RVMYP---------V-KRTFWF---- 188 (362)
Q Consensus 140 ~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~----------------~~~~~---------~-~~~~~~---- 188 (362)
+++|+||||||.+++.++.++|+ |+++|++++..... ..+.. + ....|.
T Consensus 1446 ~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 1525 (1655)
T PLN02980 1446 KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRN 1525 (1655)
T ss_pred CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhcc
Confidence 99999999999999999999994 99999987532100 00000 0 000000
Q ss_pred -----c----------------c---------ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCC
Q 018008 189 -----D----------------I---------YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKG 238 (362)
Q Consensus 189 -----~----------------~---------~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g 238 (362)
. . .+..+.++++++|+|+|+|++|..++ +.++++.+.+++......-.+
T Consensus 1526 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~ 1604 (1655)
T PLN02980 1526 HPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKG 1604 (1655)
T ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccccccc
Confidence 0 0 00013466789999999999998774 667777777654100000000
Q ss_pred CCcCccccCCCCCcccCCcchhhhcccccccccCCCCC
Q 018008 239 GNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKLRPS 276 (362)
Q Consensus 239 ~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~~~~ 276 (362)
..+..+.+++++||++++|+|+.|++.|.+||+...++
T Consensus 1605 ~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1605 KEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred ccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcccc
Confidence 11356788999999999999999999999999876544
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.79 E-value=1.2e-18 Score=148.47 Aligned_cols=169 Identities=19% Similarity=0.256 Sum_probs=117.6
Q ss_pred eEEEEeCCCcCChhchHH-HHHHHHHh--cCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 018008 69 LTVLYSHGNAADLGQMCP-IFTELSVH--LNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYG 145 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~-~~~~l~~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 145 (362)
|+|||+||++++...|.. .+..++.. .++.|+++|+||++ +++.+.+..++++++. ++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~--~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGG--DPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCC--CCeEEEE
Confidence 589999999999888774 44555544 37999999999874 3567777888888876 7899999
Q ss_pred EccchHHHHHHHHhCCCccEEEEcCCccccchhccc--------cc-ccccc------ccc-cccCCCCCCCCCEEEEEe
Q 018008 146 QSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYP--------VK-RTFWF------DIY-KNIDKIPLVECPVLVIHG 209 (362)
Q Consensus 146 hS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~--------~~-~~~~~------~~~-~~~~~~~~i~~P~lvi~G 209 (362)
|||||.+++.++..+| . .+|+++|.......... .. ..+.. +.. -.+..+. .++|+++++|
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg 144 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLE-SPDLIWLLQQ 144 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCC-ChhhEEEEEe
Confidence 9999999999999998 3 46788887653221110 00 00111 000 1123333 6778999999
Q ss_pred CCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 210 TEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 210 ~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
++|+++|++.+.++++.+ +...++|++|.. ...+++.+.+.+|+.
T Consensus 145 ~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f-------------~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 145 TGDEVLDYRQAVAYYAAC----RQTVEEGGNHAF-------------VGFERYFNQIVDFLG 189 (190)
T ss_pred CCCCcCCHHHHHHHHHhc----ceEEECCCCcch-------------hhHHHhHHHHHHHhc
Confidence 999999999999999864 445667777733 112455566666653
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=99.78 E-value=1.1e-18 Score=174.34 Aligned_cols=208 Identities=16% Similarity=0.125 Sum_probs=139.7
Q ss_pred EcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCC-CccchHHHHHHHHH
Q 018008 50 STKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKP-SEQDTYADIEAAYK 128 (362)
Q Consensus 50 ~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~d~~~~i~ 128 (362)
...+|..+.++.+. +...|+|||+||++++...|..++..+ ..+|.|+++|+||||.|.... ...+.++++.+.+.
T Consensus 8 ~~~~g~~l~~~~~g-~~~~~~ivllHG~~~~~~~w~~~~~~L--~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~ 84 (582)
T PRK05855 8 VSSDGVRLAVYEWG-DPDRPTVVLVHGYPDNHEVWDGVAPLL--ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFA 84 (582)
T ss_pred EeeCCEEEEEEEcC-CCCCCeEEEEcCCCchHHHHHHHHHHh--hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 34577777655443 345789999999999988888777766 458999999999999998533 23456778888888
Q ss_pred HHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC---CccEEEEcC-Cccccc-----------------hhcccccc---
Q 018008 129 CLEETYGVKEEDIILYGQSVGSGPTLELAVRLP---RLRAVILHS-PILSGL-----------------RVMYPVKR--- 184 (362)
Q Consensus 129 ~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p---~v~~~vl~~-p~~~~~-----------------~~~~~~~~--- 184 (362)
.+++..+. ..+++|+||||||.+++.++.... .+..++.++ |..... ........
T Consensus 85 ~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (582)
T PRK05855 85 AVIDAVSP-DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWY 163 (582)
T ss_pred HHHHHhCC-CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHH
Confidence 88888765 245999999999999988877632 133333333 211100 00000000
Q ss_pred -------------------ccccc---c----------------------------c---cccCCCCCCCCCEEEEEeCC
Q 018008 185 -------------------TFWFD---I----------------------------Y---KNIDKIPLVECPVLVIHGTE 211 (362)
Q Consensus 185 -------------------~~~~~---~----------------------------~---~~~~~~~~i~~P~lvi~G~~ 211 (362)
..+.. . . .....+..+++|+|+|+|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~ 243 (582)
T PRK05855 164 IYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTG 243 (582)
T ss_pred HHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCC
Confidence 00000 0 0 00112344789999999999
Q ss_pred CCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccCCC
Q 018008 212 DEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKLR 274 (362)
Q Consensus 212 D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~~ 274 (362)
|.++++...+.+.+.++. ..+..++ +||+++.|+|+.+.+.+.+|+....
T Consensus 244 D~~v~~~~~~~~~~~~~~------------~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 244 DPYVRPALYDDLSRWVPR------------LWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CcccCHHHhccccccCCc------------ceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 999999888777665543 2334444 6899999999999999999998644
No 56
>PRK11460 putative hydrolase; Provisional
Probab=99.76 E-value=1.8e-17 Score=145.85 Aligned_cols=179 Identities=19% Similarity=0.161 Sum_probs=121.0
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCC---C-------CCCccch-------HHHHHHHHH
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSS---G-------KPSEQDT-------YADIEAAYK 128 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~---~-------~~~~~~~-------~~d~~~~i~ 128 (362)
.+.|+||++||+|++...|..+...+ ...+..+..++.+|..... + ....... .+.+.+.++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l-~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWF-APAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHH-HHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 45789999999999998888877777 4444333444455432211 0 0011111 223445666
Q ss_pred HHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEE
Q 018008 129 CLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVI 207 (362)
Q Consensus 129 ~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi 207 (362)
++.++++++.++++|+|||+||.+++.++...|+ +.+++.+++.+... .......+|++++
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------~~~~~~~~pvli~ 154 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------PETAPTATTIHLI 154 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc------------------cccccCCCcEEEE
Confidence 6667788887899999999999999999988886 56677766543210 0112246899999
Q ss_pred EeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 208 HGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 208 ~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
||++|+++|++.++++.+.++.. +..+.+..+++.+|....+..+...+.+.++|.
T Consensus 155 hG~~D~vvp~~~~~~~~~~L~~~--------g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 155 HGGEDPVIDVAHAVAAQEALISL--------GGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred ecCCCCccCHHHHHHHHHHHHHC--------CCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 99999999999999999988753 123556677888888766655555555555553
No 57
>PLN02872 triacylglycerol lipase
Probab=99.75 E-value=3.3e-18 Score=160.94 Aligned_cols=218 Identities=17% Similarity=0.112 Sum_probs=146.8
Q ss_pred CCCCeeEEEEEcCCCCEEEEEEEeCC------CCCeEEEEeCCCcCChhchH-----HHHHHHHHhcCeEEEEEccCCCc
Q 018008 40 QRDDVDVLKLSTKKGNEIVAMYVKNP------SASLTVLYSHGNAADLGQMC-----PIFTELSVHLNVSLMGYDYSGYG 108 (362)
Q Consensus 40 ~~~~~~~~~i~~~~g~~l~~~~~~~~------~~~p~vv~lHG~~~~~~~~~-----~~~~~l~~~~g~~vi~~D~~G~G 108 (362)
...++|...+.|.||..+....++++ ..+|+||++||++.+...|. ..+...+.+.||.|+++|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 46889999999999999987776532 23689999999988776663 23444557889999999999987
Q ss_pred CCCCCC----C-c---cch-----HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC----ccEEEEcCC
Q 018008 109 HSSGKP----S-E---QDT-----YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR----LRAVILHSP 171 (362)
Q Consensus 109 ~s~~~~----~-~---~~~-----~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p 171 (362)
.+.+.. . . ... ..|+.+.++++++.. .++++++|||+||.+++.++ ..|+ |+.+++++|
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 653211 0 0 111 257778888877543 27899999999999998555 4563 777777776
Q ss_pred cccc------c---------hhc---------cccc-----------c-c--------cc--------------------
Q 018008 172 ILSG------L---------RVM---------YPVK-----------R-T--------FW-------------------- 187 (362)
Q Consensus 172 ~~~~------~---------~~~---------~~~~-----------~-~--------~~-------------------- 187 (362)
..-. + ..+ .+.. . . .+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~p 275 (395)
T PLN02872 196 ISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEP 275 (395)
T ss_pred hhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCC
Confidence 4310 0 000 0000 0 0 00
Q ss_pred -------------------cccc---------------cccCCCCCC--CCCEEEEEeCCCCCCCchhHHHHHHHhccCc
Q 018008 188 -------------------FDIY---------------KNIDKIPLV--ECPVLVIHGTEDEVVDFSHGKQLWELCKDKY 231 (362)
Q Consensus 188 -------------------~~~~---------------~~~~~~~~i--~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~ 231 (362)
+..| .+...+.++ ++|+++++|++|.+++++.++.+.+.++...
T Consensus 276 agtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~ 355 (395)
T PLN02872 276 HPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKP 355 (395)
T ss_pred CcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCcc
Confidence 0000 112234455 5799999999999999999999999987633
Q ss_pred ceEEeCCCCcCccccCCCCCc---ccCCcchhhhcccccccccC
Q 018008 232 EPLWLKGGNHCNLELYPENVS---EQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 232 ~~~~i~g~~h~~~~~~~~~~H---~~~~e~~~~~~~~i~~fl~~ 272 (362)
+ +..+++.+| +...+.++++.+.|.+|++.
T Consensus 356 ~-----------l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~ 388 (395)
T PLN02872 356 E-----------LLYLENYGHIDFLLSTSAKEDVYNHMIQFFRS 388 (395)
T ss_pred E-----------EEEcCCCCCHHHHhCcchHHHHHHHHHHHHHH
Confidence 3 344555666 34557889999999999974
No 58
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.74 E-value=3.8e-18 Score=148.54 Aligned_cols=178 Identities=19% Similarity=0.251 Sum_probs=123.7
Q ss_pred HHHHHHHhcCeEEEEEccCCCcCCC-------CCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 87 IFTELSVHLNVSLMGYDYSGYGHSS-------GKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 87 ~~~~l~~~~g~~vi~~D~~G~G~s~-------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
....++.+.||.|+.+|+||.+... ........++|+.++++++.++..+|+++|+++|+|+||++++.++..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 3445668889999999999976421 122224567999999999999988899999999999999999999998
Q ss_pred CCC-ccEEEEcCCccccchhcccc---cc------------ccccccccccCCCCC--CCCCEEEEEeCCCCCCCchhHH
Q 018008 160 LPR-LRAVILHSPILSGLRVMYPV---KR------------TFWFDIYKNIDKIPL--VECPVLVIHGTEDEVVDFSHGK 221 (362)
Q Consensus 160 ~p~-v~~~vl~~p~~~~~~~~~~~---~~------------~~~~~~~~~~~~~~~--i~~P~lvi~G~~D~~v~~~~~~ 221 (362)
+|+ ++++|..+|+.+........ .. ...+........+.. +++|+|++||++|..||++++.
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~ 164 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSL 164 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHH
T ss_pred cceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHH
Confidence 886 89999999987643322110 00 000111222334444 7899999999999999999999
Q ss_pred HHHHHhccCcceEEeCCCCcCccccCCCCCcccC-CcchhhhcccccccccC
Q 018008 222 QLWELCKDKYEPLWLKGGNHCNLELYPENVSEQG-SDQQENQRNNTEQKTEK 272 (362)
Q Consensus 222 ~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~-~e~~~~~~~~i~~fl~~ 272 (362)
++++.+... +....+..+|+.+|... .+....+.+.+.+||++
T Consensus 165 ~~~~~L~~~--------g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 165 RLYNALRKA--------GKPVELLIFPGEGHGFGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp HHHHHHHHT--------TSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc--------CCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHH
Confidence 999998863 11255666677777543 23344566677777753
No 59
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.73 E-value=5.3e-18 Score=138.71 Aligned_cols=203 Identities=22% Similarity=0.258 Sum_probs=146.4
Q ss_pred CCCEEEEEEEeCCCCCeEEEEeCCCcC-ChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc---cchHHHHHHHHH
Q 018008 53 KGNEIVAMYVKNPSASLTVLYSHGNAA-DLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE---QDTYADIEAAYK 128 (362)
Q Consensus 53 ~g~~l~~~~~~~~~~~p~vv~lHG~~~-~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~---~~~~~d~~~~i~ 128 (362)
+|.++.+.-+ ......||++.|.-+ ...+|..++..++....+.++++|-||+|.|.++... .....|.+.+++
T Consensus 29 ng~ql~y~~~--G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avd 106 (277)
T KOG2984|consen 29 NGTQLGYCKY--GHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVD 106 (277)
T ss_pred cCceeeeeec--CCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHH
Confidence 5667764333 334457888898654 4578888998888887899999999999999843221 112245555544
Q ss_pred HHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc----------cchhcc--------cccc-----
Q 018008 129 CLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS----------GLRVMY--------PVKR----- 184 (362)
Q Consensus 129 ~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~----------~~~~~~--------~~~~----- 184 (362)
|++.+.. +++.++|+|-||..++..|+++++ |..+|+++...- +++... |+..
T Consensus 107 -LM~aLk~--~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e 183 (277)
T KOG2984|consen 107 -LMEALKL--EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPE 183 (277)
T ss_pred -HHHHhCC--CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHH
Confidence 4556665 899999999999999999999996 999998875321 111111 1111
Q ss_pred ---cc---cccccc----------ccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCC
Q 018008 185 ---TF---WFDIYK----------NIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYP 248 (362)
Q Consensus 185 ---~~---~~~~~~----------~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~ 248 (362)
.. |.|... -...+++++||+||+||+.|++++..++--+-+..+ |+.++++|
T Consensus 184 ~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~------------~a~~~~~p 251 (277)
T KOG2984|consen 184 TFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS------------LAKVEIHP 251 (277)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc------------cceEEEcc
Confidence 11 111100 123567899999999999999999888776666544 68889999
Q ss_pred CCCcccCCcchhhhcccccccccC
Q 018008 249 ENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 249 ~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+.+|..++..+++|+..+.+||++
T Consensus 252 eGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 252 EGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCcceeeechHHHHHHHHHHHhc
Confidence 999999999999999999999974
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.72 E-value=1.4e-16 Score=138.45 Aligned_cols=164 Identities=13% Similarity=0.130 Sum_probs=114.7
Q ss_pred CCCeEEEEeCCCcCChhchHH--HHHHHHHhcCeEEEEEccCCCcCCCCCC---------CccchHHHHHHHHHHHHHHh
Q 018008 66 SASLTVLYSHGNAADLGQMCP--IFTELSVHLNVSLMGYDYSGYGHSSGKP---------SEQDTYADIEAAYKCLEETY 134 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~~G~G~s~~~~---------~~~~~~~d~~~~i~~l~~~~ 134 (362)
+..|+||++||++.+...+.. .+..++.+.|+.|+++|++|++.+.... .......++...++++.+++
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 457999999999987665541 2556667789999999999987543211 11234577888999999998
Q ss_pred CCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccch-hccc--------cccccccccccc-cCCCCCCCCC
Q 018008 135 GVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLR-VMYP--------VKRTFWFDIYKN-IDKIPLVECP 203 (362)
Q Consensus 135 ~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~-~~~~--------~~~~~~~~~~~~-~~~~~~i~~P 203 (362)
++++++++|+|||+||.+++.++..+|+ +.+++.+++...... .... .....|.+.... .........|
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 170 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVCRLVRGMQSEYNGPTPI 170 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHHHHHHhccCCcccCCCCe
Confidence 8888899999999999999999999996 888888776542111 0000 000011111111 1122233445
Q ss_pred EEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 204 VLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 204 ~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
++++||++|.+||++.++.+.+.+..
T Consensus 171 ~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 171 MSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred EEEEEcCCCceeCcchHHHHHHHHHH
Confidence 78999999999999999999999876
No 61
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.72 E-value=7.6e-17 Score=147.56 Aligned_cols=199 Identities=20% Similarity=0.264 Sum_probs=135.8
Q ss_pred CCCeeEEEEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCC----
Q 018008 41 RDDVDVLKLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGK---- 113 (362)
Q Consensus 41 ~~~~~~~~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~---- 113 (362)
...+..+.+.+.+|..+.++++.|. ++.|+||.+||.++....+...+. + ...|+.|+.+|.+|+|.....
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~-a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-W-AAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-H-HHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-c-ccCCeEEEEecCCCCCCCCCCcccc
Confidence 4456678888899999999988765 345899999999998777666543 3 677999999999999832200
Q ss_pred -------------CC--cc----chHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccc
Q 018008 114 -------------PS--EQ----DTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILS 174 (362)
Q Consensus 114 -------------~~--~~----~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~ 174 (362)
.. .. ..+.|...+++.+.....+|+++|++.|.|+||.+++.+|+..++|++++...|++.
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLC 210 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSS
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCcc
Confidence 00 00 134788899999998888888999999999999999999999999999999999886
Q ss_pred cchhcccccc--------cccc-----------------ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 175 GLRVMYPVKR--------TFWF-----------------DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 175 ~~~~~~~~~~--------~~~~-----------------~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
.......... ..|+ ..++.....+.++||+++..|-.|+++|++.....++.++.
T Consensus 211 d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~ 290 (320)
T PF05448_consen 211 DFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG 290 (320)
T ss_dssp SHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S
T ss_pred chhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC
Confidence 5432211111 0111 12233445567899999999999999999999999999988
Q ss_pred CcceEEeCCCCc
Q 018008 230 KYEPLWLKGGNH 241 (362)
Q Consensus 230 ~~~~~~i~g~~h 241 (362)
.+++.+++..+|
T Consensus 291 ~K~l~vyp~~~H 302 (320)
T PF05448_consen 291 PKELVVYPEYGH 302 (320)
T ss_dssp SEEEEEETT--S
T ss_pred CeeEEeccCcCC
Confidence 777766666555
No 62
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.71 E-value=1.5e-16 Score=136.70 Aligned_cols=136 Identities=18% Similarity=0.272 Sum_probs=95.9
Q ss_pred eccCCCCCCee---EEEEEcCCCCEEEEEEEeC-CCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCC
Q 018008 35 ISDVHQRDDVD---VLKLSTKKGNEIVAMYVKN-PSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHS 110 (362)
Q Consensus 35 ~~~~~~~~~~~---~~~i~~~~g~~l~~~~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s 110 (362)
.++.+|..-+. .+.++..++ .+..++..+ ....|+++++||+|.+.-.|.....++.....+.++++|+||||++
T Consensus 38 ~S~~pWs~yFdekedv~i~~~~~-t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeT 116 (343)
T KOG2564|consen 38 YSPVPWSDYFDEKEDVSIDGSDL-TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGET 116 (343)
T ss_pred cCCCchHHhhccccccccCCCcc-eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCcc
Confidence 35556654443 344444443 344444333 4567999999999999999999999998888899999999999999
Q ss_pred CCCCCccchHHHHHHHHHH-HHHHhCCCCCcEEEEEEccchHHHHHHHHh--CCCccEEEEcCC
Q 018008 111 SGKPSEQDTYADIEAAYKC-LEETYGVKEEDIILYGQSVGSGPTLELAVR--LPRLRAVILHSP 171 (362)
Q Consensus 111 ~~~~~~~~~~~d~~~~i~~-l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~--~p~v~~~vl~~p 171 (362)
.-+....-+.+-+..++-. +.+-|+-.+.+|+|+||||||.+|...|.. .|.+.|+++++-
T Consensus 117 k~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDV 180 (343)
T KOG2564|consen 117 KVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDV 180 (343)
T ss_pred ccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEEE
Confidence 8555444444444433333 334565566899999999999999887765 356888888763
No 63
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.70 E-value=1.7e-15 Score=136.96 Aligned_cols=187 Identities=17% Similarity=0.247 Sum_probs=115.4
Q ss_pred CCeeEEEEEcCC-CCEEEEEEEeC----CCCCeEEEEeCCCcCChhchHH--HHHHHHHhcCeEEEEEcc--CCCcCCCC
Q 018008 42 DDVDVLKLSTKK-GNEIVAMYVKN----PSASLTVLYSHGNAADLGQMCP--IFTELSVHLNVSLMGYDY--SGYGHSSG 112 (362)
Q Consensus 42 ~~~~~~~i~~~~-g~~l~~~~~~~----~~~~p~vv~lHG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~--~G~G~s~~ 112 (362)
...+.+++.... +..+.+.++.| ..+.|+|+++||++++...|.. .+..++...|+.|+++|. +|+|.+..
T Consensus 11 ~~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 11 GTQGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 344555555543 34444444433 2356999999999988776643 355676778999999998 44442210
Q ss_pred C------------------C-Ccc-chHHHHHHHHHHHHH-HhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcC
Q 018008 113 K------------------P-SEQ-DTYADIEAAYKCLEE-TYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHS 170 (362)
Q Consensus 113 ~------------------~-~~~-~~~~d~~~~i~~l~~-~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~ 170 (362)
. + ... .....+.+.+..+++ .++++.++++++||||||++++.++..+|+ ++++++++
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 170 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFA 170 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEEC
Confidence 0 0 001 122334444444444 467777899999999999999999999995 99999999
Q ss_pred Cccccchhcc---------ccccccccccccccCCC--CCCCCCEEEEEeCCCCCCCc-hhHHHHHHHhcc
Q 018008 171 PILSGLRVMY---------PVKRTFWFDIYKNIDKI--PLVECPVLVIHGTEDEVVDF-SHGKQLWELCKD 229 (362)
Q Consensus 171 p~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~i~~P~lvi~G~~D~~v~~-~~~~~l~~~~~~ 229 (362)
|+........ ......|. ..+....+ .....|+++++|+.|+.++. .+...+.+.+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~ 240 (275)
T TIGR02821 171 PIVAPSRCPWGQKAFSAYLGADEAAWR-SYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRA 240 (275)
T ss_pred CccCcccCcchHHHHHHHhcccccchh-hcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHH
Confidence 8865321100 00000000 01111111 12457999999999999998 566777777664
No 64
>PRK10162 acetyl esterase; Provisional
Probab=99.70 E-value=1e-15 Score=141.20 Aligned_cols=216 Identities=17% Similarity=0.218 Sum_probs=137.8
Q ss_pred CeeEEEEEcCCCCEEEEEEE-eCCCCCeEEEEeCCCcC---ChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccc
Q 018008 43 DVDVLKLSTKKGNEIVAMYV-KNPSASLTVLYSHGNAA---DLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQD 118 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~-~~~~~~p~vv~lHG~~~---~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~ 118 (362)
..+++.+++.+|. +...++ +.....|+||++||+|. +...+......++...|+.|+.+|||...+. ....
T Consensus 56 ~~~~~~i~~~~g~-i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~----~~p~ 130 (318)
T PRK10162 56 ATRAYMVPTPYGQ-VETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA----RFPQ 130 (318)
T ss_pred eEEEEEEecCCCc-eEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC----CCCC
Confidence 4778888888884 444444 43445689999999883 4445566677776667999999999964432 2334
Q ss_pred hHHHHHHHHHHHHH---HhCCCCCcEEEEEEccchHHHHHHHHhC-------CCccEEEEcCCccccchhc----cc---
Q 018008 119 TYADIEAAYKCLEE---TYGVKEEDIILYGQSVGSGPTLELAVRL-------PRLRAVILHSPILSGLRVM----YP--- 181 (362)
Q Consensus 119 ~~~d~~~~i~~l~~---~~~~~~~~i~l~GhS~Gg~ia~~~a~~~-------p~v~~~vl~~p~~~~~~~~----~~--- 181 (362)
.++|+.+++.++.+ .+++++++++|+|+|+||.+++.++... +.+.++|+++|+.+..... +.
T Consensus 131 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~ 210 (318)
T PRK10162 131 AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVW 210 (318)
T ss_pred cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCc
Confidence 56788888888765 5788888999999999999999988753 3589999999987532110 00
Q ss_pred --ccc---ccccccc--------cc-----cCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC---cceEEeCCCC
Q 018008 182 --VKR---TFWFDIY--------KN-----IDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK---YEPLWLKGGN 240 (362)
Q Consensus 182 --~~~---~~~~~~~--------~~-----~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~---~~~~~i~g~~ 240 (362)
... .++...| +. ...+...-.|+++++|+.|++. .+++.+.+.+.+. ++.+.++|..
T Consensus 211 ~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~g~~ 288 (318)
T PRK10162 211 DGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYPGTL 288 (318)
T ss_pred cccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEECCCc
Confidence 000 0000000 00 0111112359999999999885 4677888877653 5666677777
Q ss_pred cCccccCCCCCcccCCcchhhhccccccccc
Q 018008 241 HCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 241 h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
|......+ ..+...+..+.+..||.
T Consensus 289 H~f~~~~~------~~~~a~~~~~~~~~~l~ 313 (318)
T PRK10162 289 HAFLHYSR------MMDTADDALRDGAQFFT 313 (318)
T ss_pred eehhhccC------chHHHHHHHHHHHHHHH
Confidence 74322111 12334445566666664
No 65
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.69 E-value=8.4e-16 Score=133.45 Aligned_cols=220 Identities=22% Similarity=0.316 Sum_probs=152.7
Q ss_pred EEEEEcCCCCE--EEEEEEeC-C--CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchH
Q 018008 46 VLKLSTKKGNE--IVAMYVKN-P--SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTY 120 (362)
Q Consensus 46 ~~~i~~~~g~~--l~~~~~~~-~--~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 120 (362)
.+++.+..|.. +.+.|... + .+..+||-+||.+++..++......| .+.|+++|.++|||+|.+.+.+...+..
T Consensus 8 ~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l-~~~~iR~I~iN~PGf~~t~~~~~~~~~n 86 (297)
T PF06342_consen 8 LVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPL-DEAGIRFIGINYPGFGFTPGYPDQQYTN 86 (297)
T ss_pred EEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHH-HHcCeEEEEeCCCCCCCCCCCcccccCh
Confidence 34555556643 44555443 2 23468999999999998877766666 8999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccc----cchh---------ccccccc--
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILS----GLRV---------MYPVKRT-- 185 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~----~~~~---------~~~~~~~-- 185 (362)
.+-...++.+++.++++ ++++.+|||.|+-.|+.++...| ..|+++++|.-- +++. ++.....
T Consensus 87 ~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~ 164 (297)
T PF06342_consen 87 EERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFI 164 (297)
T ss_pred HHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc-cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHH
Confidence 99999999999999987 78999999999999999999997 679999987420 0100 0000000
Q ss_pred --------------------------------cccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcce
Q 018008 186 --------------------------------FWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEP 233 (362)
Q Consensus 186 --------------------------------~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~ 233 (362)
.+......++.+...++|+|+++|.+|..+.-+...+++..+.+-...
T Consensus 165 ~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf 244 (297)
T PF06342_consen 165 INAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHF 244 (297)
T ss_pred HHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccce
Confidence 000111335666677899999999999999999998888877652222
Q ss_pred EE---------------eCCCCcCccccCCCCCcccCCcchhhhcccccc
Q 018008 234 LW---------------LKGGNHCNLELYPENVSEQGSDQQENQRNNTEQ 268 (362)
Q Consensus 234 ~~---------------i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~ 268 (362)
.. +.++.......+.+.||+.+-.+++-.++.+..
T Consensus 245 ~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~ 294 (297)
T PF06342_consen 245 NIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKK 294 (297)
T ss_pred eeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHH
Confidence 11 111222233455556777766666555554443
No 66
>PLN00021 chlorophyllase
Probab=99.69 E-value=3e-15 Score=136.87 Aligned_cols=173 Identities=14% Similarity=0.113 Sum_probs=118.4
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHH--------hCCC
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEET--------YGVK 137 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~--------~~~~ 137 (362)
+..|+|||+||++.+...|...+..+ .++||.|+++|++|++... ....+++..+++.++.+. ...+
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~L-as~G~~VvapD~~g~~~~~----~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d 124 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHI-ASHGFIVVAPQLYTLAGPD----GTDEIKDAAAVINWLSSGLAAVLPEGVRPD 124 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHH-HhCCCEEEEecCCCcCCCC----chhhHHHHHHHHHHHHhhhhhhcccccccC
Confidence 45699999999998876666666555 7779999999999864322 223445666666666643 1234
Q ss_pred CCcEEEEEEccchHHHHHHHHhCC------CccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCC
Q 018008 138 EEDIILYGQSVGSGPTLELAVRLP------RLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTE 211 (362)
Q Consensus 138 ~~~i~l~GhS~Gg~ia~~~a~~~p------~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~ 211 (362)
.++++++|||+||.+++.++...+ .+.++|+++|+........ . .... +........+.+|+|++.+..
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~-~-~p~i---l~~~~~s~~~~~P~liig~g~ 199 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ-T-PPPV---LTYAPHSFNLDIPVLVIGTGL 199 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC-C-CCcc---cccCcccccCCCCeEEEecCC
Confidence 578999999999999999999876 3799999999754221100 0 0001 111112223679999999997
Q ss_pred CC-----C----CCch-hHHHHHHHhccCcceEEeCCCCcCccccCC
Q 018008 212 DE-----V----VDFS-HGKQLWELCKDKYEPLWLKGGNHCNLELYP 248 (362)
Q Consensus 212 D~-----~----v~~~-~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~ 248 (362)
|. . .|.. +-.++++.++..+..+.+++++|..+..-.
T Consensus 200 ~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 200 GGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 63 2 2243 447889999888888888999998775433
No 67
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.69 E-value=2.6e-16 Score=139.72 Aligned_cols=193 Identities=17% Similarity=0.229 Sum_probs=139.1
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCC--CCCcEEE
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGV--KEEDIIL 143 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~--~~~~i~l 143 (362)
...|+++++||..++...|...-..|....+..|+++|.|.||.|..-. ...+..++..+..+++..+. ...+++|
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~--~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT--VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc--ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 4679999999999999999999999988899999999999999998432 22366666666666665531 2378999
Q ss_pred EEEccch-HHHHHHHHhCCC-ccEEEEcC--Cccccc---------hhc-------------------------------
Q 018008 144 YGQSVGS-GPTLELAVRLPR-LRAVILHS--PILSGL---------RVM------------------------------- 179 (362)
Q Consensus 144 ~GhS~Gg-~ia~~~a~~~p~-v~~~vl~~--p~~~~~---------~~~------------------------------- 179 (362)
+|||||| .+++..+...|. +..+|+.. |..-+. ..+
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 777777777774 65555543 311000 000
Q ss_pred ---cccc-----cc------------cccc--c---ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceE
Q 018008 180 ---YPVK-----RT------------FWFD--I---YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPL 234 (362)
Q Consensus 180 ---~~~~-----~~------------~~~~--~---~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~ 234 (362)
.... .+ .+.+ . +...+. .....|+|+++|.++.+++.++-.++...++.
T Consensus 208 fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~----- 281 (315)
T KOG2382|consen 208 FILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN----- 281 (315)
T ss_pred HHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcChhHHHHHHHhccc-----
Confidence 0000 00 0000 0 011222 45678999999999999999988888888775
Q ss_pred EeCCCCcCccccCCCCCcccCCcchhhhcccccccccCC
Q 018008 235 WLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKL 273 (362)
Q Consensus 235 ~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~ 273 (362)
+.+..++++|||.+.|+|++|.+.|.+|++..
T Consensus 282 -------~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 282 -------VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred -------hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 67788888999999999999999999998753
No 68
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.69 E-value=1e-15 Score=135.63 Aligned_cols=202 Identities=15% Similarity=0.153 Sum_probs=135.8
Q ss_pred CeeEEEEEcCCCCEEEEEEEeCC--CCCeEEEEeCCCcCCh-hchHHHHHHHHHhcCeEEEEEccCCCcCCCCC---CCc
Q 018008 43 DVDVLKLSTKKGNEIVAMYVKNP--SASLTVLYSHGNAADL-GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGK---PSE 116 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~---~~~ 116 (362)
......+.+++|..+...+..++ ...|.||++||..++. +.+...+.+.+.+.||.|+++|+|||+.+... ...
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 34455788999987766665544 2458999999987665 44555666666888999999999999987631 223
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC---CccEEEEcCCccccc----------h------
Q 018008 117 QDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP---RLRAVILHSPILSGL----------R------ 177 (362)
Q Consensus 117 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p---~v~~~vl~~p~~~~~----------~------ 177 (362)
.+..+|+...++++...+. +.++..+|.|+||.+.+.+..+.. .+.+.+.++..++.. .
T Consensus 128 ~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r 205 (345)
T COG0429 128 SGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSR 205 (345)
T ss_pred ccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHH
Confidence 4566999999999988764 389999999999966555555433 255555554322211 0
Q ss_pred ---------------hc---cccc--------ccc-------------------ccccccccCCCCCCCCCEEEEEeCCC
Q 018008 178 ---------------VM---YPVK--------RTF-------------------WFDIYKNIDKIPLVECPVLVIHGTED 212 (362)
Q Consensus 178 ---------------~~---~~~~--------~~~-------------------~~~~~~~~~~~~~i~~P~lvi~G~~D 212 (362)
.+ .+.. ++. ++...+.+..+++|.+|+|+|++.+|
T Consensus 206 ~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DD 285 (345)
T COG0429 206 YLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDD 285 (345)
T ss_pred HHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCC
Confidence 00 0000 000 00112346678889999999999999
Q ss_pred CCCCchhHHHHHHHhccCcceEEeCCCCcCcccc
Q 018008 213 EVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLEL 246 (362)
Q Consensus 213 ~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~ 246 (362)
++++++..-......+.+..+..-+-|||+.+.-
T Consensus 286 P~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 286 PFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred CCCChhhCCcchhcCCCceEEEeecCCceEEecc
Confidence 9999877666666566666666777778866553
No 69
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.68 E-value=3.5e-16 Score=136.63 Aligned_cols=187 Identities=19% Similarity=0.147 Sum_probs=114.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcC-CCCCCCc-------------cchHHHHHHHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGH-SSGKPSE-------------QDTYADIEAAYKCLEE 132 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~-s~~~~~~-------------~~~~~d~~~~i~~l~~ 132 (362)
+.|.||++|++.+-... ...+.+.+++.||.|+++|+-+... ....... .....++.++++++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~-~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPN-IRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp SEEEEEEE-BTTBS-HH-HHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEcCCCCCchH-HHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 57999999998876534 4444444477899999999864333 1111100 0122456677777777
Q ss_pred HhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCC
Q 018008 133 TYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTED 212 (362)
Q Consensus 133 ~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D 212 (362)
+..++.++|.++|+|+||.+++.++...+.++++|...|... .........++++|+++++|++|
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~---------------~~~~~~~~~~~~~P~l~~~g~~D 156 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSP---------------PPPPLEDAPKIKAPVLILFGEND 156 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSS---------------GGGHHHHGGG--S-EEEEEETT-
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCC---------------CCcchhhhcccCCCEeecCccCC
Confidence 765566899999999999999999998878999999887110 01112234557899999999999
Q ss_pred CCCCchhHHHHHHHhcc---CcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 213 EVVDFSHGKQLWELCKD---KYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 213 ~~v~~~~~~~l~~~~~~---~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+.++.+..+.+.+.+.. ..++.+++|++|........ ....+..++.++.+.+||++
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~---~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 157 PFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP---PYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST---T--HHHHHHHHHHHHHHHCC
T ss_pred CCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc---ccCHHHHHHHHHHHHHHHHh
Confidence 99999998888888843 35666677777744332222 12223334455666677754
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.67 E-value=1.4e-15 Score=135.45 Aligned_cols=127 Identities=22% Similarity=0.330 Sum_probs=92.9
Q ss_pred EEEEcCCCCEEEEEEEeCCC--CCeEEEEeCCCcCChhch---HHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc---cc
Q 018008 47 LKLSTKKGNEIVAMYVKNPS--ASLTVLYSHGNAADLGQM---CPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE---QD 118 (362)
Q Consensus 47 ~~i~~~~g~~l~~~~~~~~~--~~p~vv~lHG~~~~~~~~---~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~---~~ 118 (362)
+.+++..|.. .++|+.+.+ ++++|||+||++.....+ +..+.+.+.+.||.|+++|+||||.|.+.... ..
T Consensus 3 ~~l~~~~g~~-~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~ 81 (266)
T TIGR03101 3 FFLDAPHGFR-FCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDV 81 (266)
T ss_pred EEecCCCCcE-EEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHH
Confidence 4566677764 455555543 368999999998643222 22233344678999999999999999764332 22
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccch
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGLR 177 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~ 177 (362)
..+|+..+++++.+. +. .+++|+||||||.+++.++.++| .++++|+++|+.++..
T Consensus 82 ~~~Dv~~ai~~L~~~-~~--~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~ 138 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQ-GH--PPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQ 138 (266)
T ss_pred HHHHHHHHHHHHHhc-CC--CCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHH
Confidence 457777777777654 44 79999999999999999999988 4999999999887643
No 71
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.67 E-value=5.1e-16 Score=132.93 Aligned_cols=197 Identities=22% Similarity=0.238 Sum_probs=150.5
Q ss_pred CeeEEEEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCC----CCC
Q 018008 43 DVDVLKLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSG----KPS 115 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~----~~~ 115 (362)
++=+++++..+|.+|.+|+..+. +..|.||-.||++++.+.|.+++. +...||.|+.+|.||+|.++. .+.
T Consensus 55 e~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~--wa~~Gyavf~MdvRGQg~~~~dt~~~p~ 132 (321)
T COG3458 55 EVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH--WAVAGYAVFVMDVRGQGSSSQDTADPPG 132 (321)
T ss_pred EEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccc--ccccceeEEEEecccCCCccccCCCCCC
Confidence 34467788889999999998764 456999999999999887777664 255699999999999988731 111
Q ss_pred c--------------------cchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCcccc
Q 018008 116 E--------------------QDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSG 175 (362)
Q Consensus 116 ~--------------------~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~ 175 (362)
. ..-+.|+..+++.+..-..++.++|.+.|.|.||.+++.+++..|+|+++++.-|+++.
T Consensus 133 ~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~d 212 (321)
T COG3458 133 GPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSD 212 (321)
T ss_pred CCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhccccccccccc
Confidence 1 11346889999999888888999999999999999999999999999999999999875
Q ss_pred chhcccccc--------ccc-------------cccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceE
Q 018008 176 LRVMYPVKR--------TFW-------------FDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPL 234 (362)
Q Consensus 176 ~~~~~~~~~--------~~~-------------~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~ 234 (362)
......... +++ ...++.......++.|+|+..|-.|+++|+.-.-+.++.+...+++.
T Consensus 213 f~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~ 292 (321)
T COG3458 213 FPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIE 292 (321)
T ss_pred chhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEE
Confidence 532222110 000 01122233445789999999999999999999999999998876666
Q ss_pred EeCCCCc
Q 018008 235 WLKGGNH 241 (362)
Q Consensus 235 ~i~g~~h 241 (362)
+++-.+|
T Consensus 293 iy~~~aH 299 (321)
T COG3458 293 IYPYFAH 299 (321)
T ss_pred Eeecccc
Confidence 6655545
No 72
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.67 E-value=3.7e-17 Score=143.04 Aligned_cols=156 Identities=23% Similarity=0.326 Sum_probs=117.9
Q ss_pred eEEEEEccCCCcCCCC---CCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCc
Q 018008 97 VSLMGYDYSGYGHSSG---KPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPI 172 (362)
Q Consensus 97 ~~vi~~D~~G~G~s~~---~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~ 172 (362)
|.|+++|+||+|.|.+ .....+...++.+.+..+++.+++ ++++++||||||.+++.+++.+|+ |+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6789999999999995 445566789999999999999998 779999999999999999999996 9999999985
Q ss_pred --cccc------hh--ccc---------------------------ccc------------cccc---------------
Q 018008 173 --LSGL------RV--MYP---------------------------VKR------------TFWF--------------- 188 (362)
Q Consensus 173 --~~~~------~~--~~~---------------------------~~~------------~~~~--------------- 188 (362)
.... .. +.. ... ..+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNA 158 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccc
Confidence 1000 00 000 000 0000
Q ss_pred ----ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcc
Q 018008 189 ----DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRN 264 (362)
Q Consensus 189 ----~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~ 264 (362)
........+..+++|+|+++|++|.++|++....+.+.+++ ..+..++++||+.+++.++++.+
T Consensus 159 ~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~------------~~~~~~~~~GH~~~~~~~~~~~~ 226 (230)
T PF00561_consen 159 LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN------------SQLVLIEGSGHFAFLEGPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT------------EEEEEETTCCSTHHHHSHHHHHH
T ss_pred ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC------------CEEEECCCCChHHHhcCHHhhhh
Confidence 00011234556899999999999999999999998888775 45667777788888888888866
Q ss_pred cc
Q 018008 265 NT 266 (362)
Q Consensus 265 ~i 266 (362)
.|
T Consensus 227 ~i 228 (230)
T PF00561_consen 227 II 228 (230)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 73
>PRK10115 protease 2; Provisional
Probab=99.67 E-value=3.2e-15 Score=150.51 Aligned_cols=189 Identities=15% Similarity=0.136 Sum_probs=141.7
Q ss_pred CCCeeEEEEEcCCCCEEEEEEE-eC----CCCCeEEEEeCCCcCChh--chHHHHHHHHHhcCeEEEEEccCCCcCCCC-
Q 018008 41 RDDVDVLKLSTKKGNEIVAMYV-KN----PSASLTVLYSHGNAADLG--QMCPIFTELSVHLNVSLMGYDYSGYGHSSG- 112 (362)
Q Consensus 41 ~~~~~~~~i~~~~g~~l~~~~~-~~----~~~~p~vv~lHG~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~- 112 (362)
....+.+.+++.||.+|.++++ .+ .++.|+||++||+.+... .|..... .+...||.|+.+++||-|.-..
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~-~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRL-SLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHH-HHHHCCcEEEEEEcCCCCccCHH
Confidence 4567888999999999998543 33 245699999999776542 2434444 4467899999999999654321
Q ss_pred ------CCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhcc----c
Q 018008 113 ------KPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMY----P 181 (362)
Q Consensus 113 ------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~----~ 181 (362)
.......++|+.+++++|+++--.+++++.++|.|+||+++..++.+.|+ ++++|+..|+++.+..+. +
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p 571 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIP 571 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCC
Confidence 12223678999999999998865688999999999999999999998886 999999999988665431 1
Q ss_pred cccc--------------cccccccccCCCCCCCCC-EEEEEeCCCCCCCchhHHHHHHHhccC
Q 018008 182 VKRT--------------FWFDIYKNIDKIPLVECP-VLVIHGTEDEVVDFSHGKQLWELCKDK 230 (362)
Q Consensus 182 ~~~~--------------~~~~~~~~~~~~~~i~~P-~lvi~G~~D~~v~~~~~~~l~~~~~~~ 230 (362)
.... .+...++++..+.+++.| +|+++|.+|+-|++.++.++..+++..
T Consensus 572 ~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~ 635 (686)
T PRK10115 572 LTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLREL 635 (686)
T ss_pred CChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhc
Confidence 1000 011234566677777889 667799999999999999999999753
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.66 E-value=9.7e-15 Score=132.48 Aligned_cols=187 Identities=14% Similarity=0.193 Sum_probs=115.4
Q ss_pred CCCeeEEEEEcC-CCCEEEEEE-EeC---CCCCeEEEEeCCCcCChhchHH--HHHHHHHhcCeEEEEEccCCCcCC---
Q 018008 41 RDDVDVLKLSTK-KGNEIVAMY-VKN---PSASLTVLYSHGNAADLGQMCP--IFTELSVHLNVSLMGYDYSGYGHS--- 110 (362)
Q Consensus 41 ~~~~~~~~i~~~-~g~~l~~~~-~~~---~~~~p~vv~lHG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~~G~G~s--- 110 (362)
...++.+++.++ -|..+.+.. +++ ....|+|+++||++++...|.. .+..++...|+.|+.+|..++|..
T Consensus 15 ~~~~~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 15 GGFNRRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred CCEEEEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 344556666553 344555444 443 2356999999999887765543 234566778999999998876621
Q ss_pred --C------CC--------CC------ccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEE
Q 018008 111 --S------GK--------PS------EQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVI 167 (362)
Q Consensus 111 --~------~~--------~~------~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~v 167 (362)
. +. .. .....+++...+....+. ++.++++++||||||+.++.++.++|+ +.+++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLKNPDKYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHhCchhEEEEE
Confidence 0 00 00 011123333344333333 355889999999999999999999996 89999
Q ss_pred EcCCccccchhcc---------ccccccc--cccccccCCCCCCCCCEEEEEeCCCCCCCch-hHHHHHHHhcc
Q 018008 168 LHSPILSGLRVMY---------PVKRTFW--FDIYKNIDKIPLVECPVLVIHGTEDEVVDFS-HGKQLWELCKD 229 (362)
Q Consensus 168 l~~p~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~-~~~~l~~~~~~ 229 (362)
+++|+.+...... ......| .+....+..+...++|+++++|++|++++.. +.+.+.+.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~ 246 (283)
T PLN02442 173 AFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKE 246 (283)
T ss_pred EECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHH
Confidence 9998864211000 0001111 1222233445557899999999999998863 46666666654
No 75
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.66 E-value=1e-15 Score=143.43 Aligned_cols=104 Identities=12% Similarity=0.062 Sum_probs=79.9
Q ss_pred CeEEEEeCCCcCChhc-----hHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchH-HHHHHHHHHHHHHhCCCCCcE
Q 018008 68 SLTVLYSHGNAADLGQ-----MCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTY-ADIEAAYKCLEETYGVKEEDI 141 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~-----~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~~i 141 (362)
+++||++||...+... +..++.. +.+.||.|+++|++|+|.+.......... +++.++++++.+..+. +++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~-L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~--~~i 138 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRG-LLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKL--DQI 138 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHH-HHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCC--Ccc
Confidence 4679999997543222 1344444 47789999999999999876444333333 4588889999988876 899
Q ss_pred EEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc
Q 018008 142 ILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS 174 (362)
Q Consensus 142 ~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~ 174 (362)
+++||||||.+++.+++.+|+ |+++|+++|.++
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred cEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 999999999999999999884 999999997654
No 76
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.64 E-value=6.7e-15 Score=136.04 Aligned_cols=187 Identities=18% Similarity=0.211 Sum_probs=121.7
Q ss_pred CCCeeEEEEEcCCCCEEEEEEEeCCC--CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccc
Q 018008 41 RDDVDVLKLSTKKGNEIVAMYVKNPS--ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQD 118 (362)
Q Consensus 41 ~~~~~~~~i~~~~g~~l~~~~~~~~~--~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~ 118 (362)
...++.+.|+..+ ..|.+++..+++ +.|+||++.|..+-..+++..+.+.+..+|++++++|.||.|.|...+...+
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D 240 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQD 240 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcC
Confidence 4568899998876 677776655543 4478888888888888888888887788999999999999999864333333
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC-CCccEEEEcCCccccchh----cccccc--------c
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL-PRLRAVILHSPILSGLRV----MYPVKR--------T 185 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~-p~v~~~vl~~p~~~~~~~----~~~~~~--------~ 185 (362)
...-...+++++.+.--+|..+|+++|.|+||+++.++|... ++|+++|..+|.+..+.. ...... .
T Consensus 241 ~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~r 320 (411)
T PF06500_consen 241 SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASR 320 (411)
T ss_dssp CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHH
Confidence 334567788888887667788999999999999999999865 589999999987543211 000000 0
Q ss_pred c---------c---cccccc--cCCC--CCCCCCEEEEEeCCCCCCCchhHHHHHHHhc
Q 018008 186 F---------W---FDIYKN--IDKI--PLVECPVLVIHGTEDEVVDFSHGKQLWELCK 228 (362)
Q Consensus 186 ~---------~---~~~~~~--~~~~--~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~ 228 (362)
+ + ...|.- ..-+ .+.++|+|.+.|++|+++|.+..+-+...-.
T Consensus 321 lG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~ 379 (411)
T PF06500_consen 321 LGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESST 379 (411)
T ss_dssp CT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT
T ss_pred hCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCC
Confidence 0 0 011111 1223 5678899999999999999988877776543
No 77
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.64 E-value=1.3e-15 Score=143.36 Aligned_cols=196 Identities=16% Similarity=0.119 Sum_probs=136.0
Q ss_pred CCeEEEEeCCCcCCh-------------hchHHHHHH--HHHhcCeEEEEEccCCCcCCCCC-----------C------
Q 018008 67 ASLTVLYSHGNAADL-------------GQMCPIFTE--LSVHLNVSLMGYDYSGYGHSSGK-----------P------ 114 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~-------------~~~~~~~~~--l~~~~g~~vi~~D~~G~G~s~~~-----------~------ 114 (362)
..++||++|+++++. ++|..++.. .+....|.||++|..|-+.|+.+ +
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 458999999998853 123333322 23455799999999987653211 1
Q ss_pred ---CccchHHHHHHHHHHHHHHhCCCCCcEE-EEEEccchHHHHHHHHhCCC-ccEEEEcCCcccc--c------h---h
Q 018008 115 ---SEQDTYADIEAAYKCLEETYGVKEEDII-LYGQSVGSGPTLELAVRLPR-LRAVILHSPILSG--L------R---V 178 (362)
Q Consensus 115 ---~~~~~~~d~~~~i~~l~~~~~~~~~~i~-l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~--~------~---~ 178 (362)
....++.|+.+++..+++++++ +++. ++||||||++++.+|.++|+ |+++|+++..... . . .
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ 212 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAE 212 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHH
Confidence 1135788999999999999998 7875 99999999999999999995 9999998642110 0 0 0
Q ss_pred -c----------c-----c---------------c-----cccccc------------------------------ccc-
Q 018008 179 -M----------Y-----P---------------V-----KRTFWF------------------------------DIY- 191 (362)
Q Consensus 179 -~----------~-----~---------------~-----~~~~~~------------------------------~~~- 191 (362)
. | + . ...++. ..+
T Consensus 213 ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~D 292 (389)
T PRK06765 213 AIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVD 292 (389)
T ss_pred HHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccC
Confidence 0 0 0 0 000000 000
Q ss_pred ---------------------cccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCC-
Q 018008 192 ---------------------KNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPE- 249 (362)
Q Consensus 192 ---------------------~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~- 249 (362)
+..+.+..+++|+|+|+|+.|.++|++..+.+.+.++.. +..+.++++++
T Consensus 293 an~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~--------~~~a~l~~I~s~ 364 (389)
T PRK06765 293 ANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQ--------GKYAEVYEIESI 364 (389)
T ss_pred hhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc--------CCCeEEEEECCC
Confidence 001234568999999999999999999999999888631 01255566664
Q ss_pred CCcccCCcchhhhcccccccccC
Q 018008 250 NVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 250 ~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
.||..++++|+++++.|.+||+.
T Consensus 365 ~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 365 NGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCcchhhcCHHHHHHHHHHHHcc
Confidence 79999999999999999999964
No 78
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.62 E-value=7.2e-15 Score=119.94 Aligned_cols=195 Identities=21% Similarity=0.235 Sum_probs=138.0
Q ss_pred eeEEEEEcCCCCEEEEEEEeCC-CCCeEEEEeCCCcCChhch----HHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-cc
Q 018008 44 VDVLKLSTKKGNEIVAMYVKNP-SASLTVLYSHGNAADLGQM----CPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-EQ 117 (362)
Q Consensus 44 ~~~~~i~~~~g~~l~~~~~~~~-~~~p~vv~lHG~~~~~~~~----~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~ 117 (362)
...+.|+.+.|. +...|.+.+ .+.|+.|++|....-.+.+ ...+...+.+.||.++-+|+||-|.|.+... ..
T Consensus 4 ~~~v~i~Gp~G~-le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~Gi 82 (210)
T COG2945 4 MPTVIINGPAGR-LEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGI 82 (210)
T ss_pred CCcEEecCCccc-ceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCc
Confidence 356667777774 455555444 5778999998754222222 3344555588999999999999999998654 35
Q ss_pred chHHHHHHHHHHHHHHhCCCCCcE-EEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhccccccccccccccccCC
Q 018008 118 DTYADIEAAYKCLEETYGVKEEDI-ILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDK 196 (362)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~~~~i-~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (362)
+..+|+.++++|+..+... .+. .|.|+|+|+++++.+|.+.|++...+...|..... ....
T Consensus 83 GE~~Da~aaldW~~~~hp~--s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~----------------dfs~ 144 (210)
T COG2945 83 GELEDAAAALDWLQARHPD--SASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAY----------------DFSF 144 (210)
T ss_pred chHHHHHHHHHHHHhhCCC--chhhhhcccchHHHHHHHHHHhcccccceeeccCCCCch----------------hhhh
Confidence 6789999999999998753 343 78999999999999999999988888888776410 0122
Q ss_pred CCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 197 IPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 197 ~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
+....+|.++|+|+.|+++++....++++..+ .+.+.+++ ..|+.+-+ ...+.+.+.+|+.
T Consensus 145 l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i~i~~-----------a~HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 145 LAPCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVITIPG-----------ADHFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred ccCCCCCceeEecChhhhhcHHHHHHhhcCCC--CceEEecC-----------CCceeccc-HHHHHHHHHHHhh
Confidence 44467899999999999999888877776622 34444444 45554433 2445566777774
No 79
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.62 E-value=1e-14 Score=127.13 Aligned_cols=183 Identities=22% Similarity=0.265 Sum_probs=102.4
Q ss_pred eCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCC------CcC---CCC-----CCCc---cchHH----
Q 018008 63 KNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSG------YGH---SSG-----KPSE---QDTYA---- 121 (362)
Q Consensus 63 ~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~---s~~-----~~~~---~~~~~---- 121 (362)
+.....++||++||.|.+...+..............++.++.|. .|. +.- .... ...+.
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 34457899999999999874444333312233456667766542 222 110 0111 11222
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccccccccccccccccCCCCCC
Q 018008 122 DIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLV 200 (362)
Q Consensus 122 d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 200 (362)
.+.+.++... +.+++.++|+|+|+|+||.+++.++...|. +.++|.+++++..... +. .......
T Consensus 89 ~l~~li~~~~-~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--------~~---~~~~~~~-- 154 (216)
T PF02230_consen 89 RLDELIDEEV-AYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--------LE---DRPEALA-- 154 (216)
T ss_dssp HHHHHHHHHH-HTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC--------CH---CCHCCCC--
T ss_pred HHHHHHHHHH-HcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc--------cc---ccccccC--
Confidence 2333333333 346788999999999999999999999995 9999999987642110 10 0111111
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
.+|++++||+.|+++|.+.++...+.+.+. +....+..|++.||....+. .+.+.+||+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~--------~~~v~~~~~~g~gH~i~~~~----~~~~~~~l~ 213 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA--------GANVEFHEYPGGGHEISPEE----LRDLREFLE 213 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT--------T-GEEEEEETT-SSS--HHH----HHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc--------CCCEEEEEcCCCCCCCCHHH----HHHHHHHHh
Confidence 689999999999999999999999998864 12356667777777664332 355566664
No 80
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.62 E-value=2.8e-14 Score=118.21 Aligned_cols=192 Identities=19% Similarity=0.274 Sum_probs=133.8
Q ss_pred eEEEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChh-chHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCcc---chH
Q 018008 45 DVLKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLG-QMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQ---DTY 120 (362)
Q Consensus 45 ~~~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~---~~~ 120 (362)
..+.|+...+..+...... .++..++|++||+-.+.. .+...++..+++.|+.++-+|++|.|+|.+..... ...
T Consensus 11 ~~ivi~n~~ne~lvg~lh~-tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~ea 89 (269)
T KOG4667|consen 11 QKIVIPNSRNEKLVGLLHE-TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEA 89 (269)
T ss_pred eEEEeccCCCchhhcceec-cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchH
Confidence 4556677777666654433 345679999999988763 33445566668899999999999999999754432 234
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhcc-ccc---------ccccc--
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMY-PVK---------RTFWF-- 188 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~-~~~---------~~~~~-- 188 (362)
+|+..++.++... .. ---+++|||-||.+++.++..++.++.+|.+++-.+...... ... ..+|.
T Consensus 90 dDL~sV~q~~s~~-nr--~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~ 166 (269)
T KOG4667|consen 90 DDLHSVIQYFSNS-NR--VVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVG 166 (269)
T ss_pred HHHHHHHHHhccC-ce--EEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecC
Confidence 6777777776552 11 234689999999999999999999999999887554322110 000 00110
Q ss_pred ----------------ccc-----cccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcC
Q 018008 189 ----------------DIY-----KNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHC 242 (362)
Q Consensus 189 ----------------~~~-----~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~ 242 (362)
+.. ..-..+ ..+||+|-+||..|.+||.+.+.++++.+++ .++.+++|++|.
T Consensus 167 ~rkG~y~~rvt~eSlmdrLntd~h~aclkI-d~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHn 239 (269)
T KOG4667|consen 167 PRKGKYGYRVTEESLMDRLNTDIHEACLKI-DKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHN 239 (269)
T ss_pred cccCCcCceecHHHHHHHHhchhhhhhcCc-CccCceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcC
Confidence 000 001112 2589999999999999999999999999998 678888888883
No 81
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.61 E-value=4.3e-14 Score=129.82 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=102.5
Q ss_pred CCCCeeEEEEEcCCCCEEEEEEEeCC--------CCCeEEEEeCCCcCCh-hchHHHHHHHHHhcCeEEEEEccCCCcCC
Q 018008 40 QRDDVDVLKLSTKKGNEIVAMYVKNP--------SASLTVLYSHGNAADL-GQMCPIFTELSVHLNVSLMGYDYSGYGHS 110 (362)
Q Consensus 40 ~~~~~~~~~i~~~~g~~l~~~~~~~~--------~~~p~vv~lHG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~s 110 (362)
....++..-++++||..+..-+..++ +..|+||++||..+++ +.+...+...+.+.||.+++++.||+|.+
T Consensus 89 p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~ 168 (409)
T KOG1838|consen 89 PPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGS 168 (409)
T ss_pred CCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCC
Confidence 34556667788999988776555322 3569999999987654 56666777777889999999999999887
Q ss_pred CCC---CCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC----ccEEEEcCCcc
Q 018008 111 SGK---PSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR----LRAVILHSPIL 173 (362)
Q Consensus 111 ~~~---~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p~~ 173 (362)
.-. .....+.+|+.++++++.+++.. .++..+|.||||.+.+.+.++..+ +.++.+++|+-
T Consensus 169 ~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~--a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 169 KLTTPRLFTAGWTEDLREVVNHIKKRYPQ--APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred ccCCCceeecCCHHHHHHHHHHHHHhCCC--CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 622 22245679999999999999854 899999999999999999987652 66777777764
No 82
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.60 E-value=3.2e-14 Score=137.82 Aligned_cols=188 Identities=14% Similarity=0.123 Sum_probs=127.2
Q ss_pred EEEEEeCCC---CCeEEEEeCCCcCChhchH----HHHHHHHHhcCeEEEEEccCCCcCCCCCCCcc-chHHHHHHHHHH
Q 018008 58 VAMYVKNPS---ASLTVLYSHGNAADLGQMC----PIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQ-DTYADIEAAYKC 129 (362)
Q Consensus 58 ~~~~~~~~~---~~p~vv~lHG~~~~~~~~~----~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~-~~~~d~~~~i~~ 129 (362)
..+.|.+.. .+++||++||+......+. .-+.+.+.+.||.|+++|++|+|.+....... +..+.+.++++.
T Consensus 175 eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~ 254 (532)
T TIGR01838 175 QLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEV 254 (532)
T ss_pred EEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHH
Confidence 334444432 4589999999876543332 23444557789999999999999886443332 333568899999
Q ss_pred HHHHhCCCCCcEEEEEEccchHHHH----HHHHhC-C-CccEEEEcCCccccch--------------------------
Q 018008 130 LEETYGVKEEDIILYGQSVGSGPTL----ELAVRL-P-RLRAVILHSPILSGLR-------------------------- 177 (362)
Q Consensus 130 l~~~~~~~~~~i~l~GhS~Gg~ia~----~~a~~~-p-~v~~~vl~~p~~~~~~-------------------------- 177 (362)
+.+..+. ++++++||||||.++. .+++.. + .|+++++++..++...
T Consensus 255 v~~~~g~--~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~l 332 (532)
T TIGR01838 255 VEAITGE--KQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYL 332 (532)
T ss_pred HHHhcCC--CCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCC
Confidence 9988877 8999999999999863 245554 5 4999999886543100
Q ss_pred ----------hcccc--------------------ccccccc----------------c-------------ccccCCCC
Q 018008 178 ----------VMYPV--------------------KRTFWFD----------------I-------------YKNIDKIP 198 (362)
Q Consensus 178 ----------~~~~~--------------------~~~~~~~----------------~-------------~~~~~~~~ 198 (362)
.+.+. ...+|.. . ......+.
T Consensus 333 pg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~ 412 (532)
T TIGR01838 333 DGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLS 412 (532)
T ss_pred CHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchh
Confidence 00000 0000110 0 01134667
Q ss_pred CCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCC
Q 018008 199 LVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYP 248 (362)
Q Consensus 199 ~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~ 248 (362)
.+++|+|+++|++|.++|++.++.+.+.+++ .+.++++++||....+-|
T Consensus 413 ~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 413 KVKVPVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVVNP 461 (532)
T ss_pred hCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhhCC
Confidence 7899999999999999999999999888874 466677888886555544
No 83
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.60 E-value=1.1e-13 Score=121.70 Aligned_cols=182 Identities=19% Similarity=0.213 Sum_probs=134.9
Q ss_pred eEEEEEcCCCCEEEEEEEeCCC--CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCC-cCCCCCC-------
Q 018008 45 DVLKLSTKKGNEIVAMYVKNPS--ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGY-GHSSGKP------- 114 (362)
Q Consensus 45 ~~~~i~~~~g~~l~~~~~~~~~--~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~s~~~~------- 114 (362)
+.+.+++.+ ..+.++...+.+ ..|.||++|++.+-.........++ +..||.|+++|+-+. |.+....
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rl-A~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~ 80 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRL-AKAGYVVLAPDLYGRQGDPTDIEDEPAELE 80 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHH-HhCCcEEEechhhccCCCCCcccccHHHHh
Confidence 456777777 567776666543 3389999999988766555555555 788999999998763 3222111
Q ss_pred -------CccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhccccccccc
Q 018008 115 -------SEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKRTFW 187 (362)
Q Consensus 115 -------~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~~~~ 187 (362)
.......|+.+.+.+|..+...+.++|.++|+||||.+++.++...|++++.+...|....
T Consensus 81 ~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~------------ 148 (236)
T COG0412 81 TGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIA------------ 148 (236)
T ss_pred hhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCC------------
Confidence 0123446888888888877656778999999999999999999998899999997765431
Q ss_pred cccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC---cceEEeCCCCcCcc
Q 018008 188 FDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK---YEPLWLKGGNHCNL 244 (362)
Q Consensus 188 ~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~---~~~~~i~g~~h~~~ 244 (362)
.......++++|+|+++|+.|..+|......+.+.+... .++.++.++.|...
T Consensus 149 ----~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 149 ----DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred ----CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 111225578999999999999999999888888888765 45667777777544
No 84
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.56 E-value=2e-13 Score=118.46 Aligned_cols=213 Identities=14% Similarity=0.159 Sum_probs=154.9
Q ss_pred eeEEEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchH------HHHHHHHHhcCeEEEEEccCCCcCCCCCCCcc
Q 018008 44 VDVLKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMC------PIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQ 117 (362)
Q Consensus 44 ~~~~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~------~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~ 117 (362)
.++..|+|..|.....++-.+++++|+||-.|+.|.+...++ +.+..+.. .+.++.+|.|||-...+.....
T Consensus 22 ~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 22 CQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred ceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCccCCCC
Confidence 678899999997655555555567899999999999887643 34445533 3889999999997766443333
Q ss_pred c---hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhc--------------
Q 018008 118 D---TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVM-------------- 179 (362)
Q Consensus 118 ~---~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~-------------- 179 (362)
+ +.+++++.+..+++++++ +.++-+|...||+|..++|..+|+ |-|+||+++....-...
T Consensus 100 y~yPsmd~LAd~l~~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~ 177 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYY 177 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHh
Confidence 2 568999999999999999 999999999999999999999995 99999999744211000
Q ss_pred ---------------------------------------cccccccccccccccCCC--------CCCCCCEEEEEeCCC
Q 018008 180 ---------------------------------------YPVKRTFWFDIYKNIDKI--------PLVECPVLVIHGTED 212 (362)
Q Consensus 180 ---------------------------------------~~~~~~~~~~~~~~~~~~--------~~i~~P~lvi~G~~D 212 (362)
.+.....+.+.|....++ ..++||+|++.|+..
T Consensus 178 ~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~S 257 (326)
T KOG2931|consen 178 YGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNS 257 (326)
T ss_pred hchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCC
Confidence 000001122223222222 145699999999998
Q ss_pred CCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 213 EVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 213 ~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+.+ +.+.....++.. .+..+..+.++|-.++.++|.+.++.+.-|++.
T Consensus 258 p~~--~~vv~~n~~Ldp----------~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 258 PHV--SAVVECNSKLDP----------TYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred chh--hhhhhhhcccCc----------ccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 774 445555555543 267788888999999999999999999999974
No 85
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.53 E-value=4.5e-13 Score=118.02 Aligned_cols=187 Identities=19% Similarity=0.276 Sum_probs=125.8
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHhc-CeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVHL-NVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
.|+++++||++++...|......+.... .|.++.+|+||||.|. .. ..........+..+.++++. .+++++||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~--~~~~l~G~ 95 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGL--EKVVLVGH 95 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCC--CceEEEEe
Confidence 5599999999998877777333332221 1899999999999997 11 22333347777888888887 56999999
Q ss_pred ccchHHHHHHHHhCCC-ccEEEEcCCccc-----------cch----------hcc----------cc--ccccc-----
Q 018008 147 SVGSGPTLELAVRLPR-LRAVILHSPILS-----------GLR----------VMY----------PV--KRTFW----- 187 (362)
Q Consensus 147 S~Gg~ia~~~a~~~p~-v~~~vl~~p~~~-----------~~~----------~~~----------~~--~~~~~----- 187 (362)
|+||.+++.++.++|. ++++|++++... ... ... .. .....
T Consensus 96 S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (282)
T COG0596 96 SMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARA 175 (282)
T ss_pred cccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchh
Confidence 9999999999999995 999999986432 000 000 00 00000
Q ss_pred --cc----------------------------ccc--ccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEE
Q 018008 188 --FD----------------------------IYK--NIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLW 235 (362)
Q Consensus 188 --~~----------------------------~~~--~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~ 235 (362)
.. ... .......+.+|+++++|+.|.+.+......+.+.++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~------ 249 (282)
T COG0596 176 GLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPN------ 249 (282)
T ss_pred ccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC------
Confidence 00 000 0122345679999999999966665554445544442
Q ss_pred eCCCCcCccccCCCCCcccCCcchhhhcccccccc
Q 018008 236 LKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKT 270 (362)
Q Consensus 236 i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl 270 (362)
...+...++.+|+.+.++|+.|++.+.+++
T Consensus 250 -----~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 250 -----DARLVVIPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred -----CceEEEeCCCCCcchhhcHHHHHHHHHHHH
Confidence 146677788899999999998887777643
No 86
>COG0400 Predicted esterase [General function prediction only]
Probab=99.52 E-value=1.3e-13 Score=117.52 Aligned_cols=145 Identities=26% Similarity=0.319 Sum_probs=102.0
Q ss_pred CCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcC--------CC---CCCCcc---chHHHHHHHHHHH
Q 018008 65 PSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGH--------SS---GKPSEQ---DTYADIEAAYKCL 130 (362)
Q Consensus 65 ~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~--------s~---~~~~~~---~~~~d~~~~i~~l 130 (362)
....|+||++||.|++..++.......+-+ ..++. .||--. +. +..... ...+.+.+.+..+
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~--~~~is--~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN--ATLVS--PRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC--CeEEc--CCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 345679999999999987777744444333 33322 232110 00 011111 1224566777778
Q ss_pred HHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEe
Q 018008 131 EETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHG 209 (362)
Q Consensus 131 ~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G 209 (362)
.++++++.++++++|+|.||++++.+...+|. ++++|+++|++.... ...-.....|++++||
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~----------------~~~~~~~~~pill~hG 154 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP----------------ELLPDLAGTPILLSHG 154 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC----------------ccccccCCCeEEEecc
Confidence 88999999999999999999999999999995 999999998865211 0111123579999999
Q ss_pred CCCCCCCchhHHHHHHHhcc
Q 018008 210 TEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 210 ~~D~~v~~~~~~~l~~~~~~ 229 (362)
+.|+++|...+.++.+.+..
T Consensus 155 ~~Dpvvp~~~~~~l~~~l~~ 174 (207)
T COG0400 155 TEDPVVPLALAEALAEYLTA 174 (207)
T ss_pred CcCCccCHHHHHHHHHHHHH
Confidence 99999999999999988875
No 87
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.50 E-value=9.5e-14 Score=122.24 Aligned_cols=210 Identities=14% Similarity=0.173 Sum_probs=131.8
Q ss_pred EEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchH-H-----HHHHHHHhcCeEEEEEccCCCcCCCCCCCccc--
Q 018008 47 LKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMC-P-----IFTELSVHLNVSLMGYDYSGYGHSSGKPSEQD-- 118 (362)
Q Consensus 47 ~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~-~-----~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~-- 118 (362)
..++|..|.....++-.+.+++|+||-.|..|.|...++ . -+..+ ...+.++-+|.||+..........+
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i--~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEI--LQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHH--HTTSEEEEEE-TTTSTT-----TT---
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHH--hhceEEEEEeCCCCCCCcccccccccc
Confidence 467888885444333223346999999999999887632 2 23333 2378889999999987664433332
Q ss_pred -hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhc-----------------
Q 018008 119 -TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVM----------------- 179 (362)
Q Consensus 119 -~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~----------------- 179 (362)
+.+++++.+..+++++++ +.++.+|-.+||++..++|..+|+ |.|+||++|.......+
T Consensus 80 Psmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gm 157 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGM 157 (283)
T ss_dssp --HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CT
T ss_pred cCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccc
Confidence 558999999999999999 899999999999999999999995 99999999855321100
Q ss_pred cc------------------------------------ccccccccccccc----CCCCCCCCCEEEEEeCCCCCCCchh
Q 018008 180 YP------------------------------------VKRTFWFDIYKNI----DKIPLVECPVLVIHGTEDEVVDFSH 219 (362)
Q Consensus 180 ~~------------------------------------~~~~~~~~~~~~~----~~~~~i~~P~lvi~G~~D~~v~~~~ 219 (362)
.+ .....+.+.|... ...+...||+|++.|+..+. .+.
T Consensus 158 t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~~ 235 (283)
T PF03096_consen 158 TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VDD 235 (283)
T ss_dssp TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HHH
T ss_pred ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hhh
Confidence 00 0000111112111 23345679999999999876 567
Q ss_pred HHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 220 GKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 220 ~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+.++..++... ...+..++++|-.++.|+|++.++.+.-|++.
T Consensus 236 vv~~ns~Ldp~----------~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 236 VVEMNSKLDPT----------KTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHS-CC----------CEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHhhcCcc----------cceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 77888888653 46777888899999999999999999888863
No 88
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.49 E-value=1.6e-12 Score=119.94 Aligned_cols=168 Identities=23% Similarity=0.254 Sum_probs=115.5
Q ss_pred CCeEEEEeCCCcC---ChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHH---hCCCCCc
Q 018008 67 ASLTVLYSHGNAA---DLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEET---YGVKEED 140 (362)
Q Consensus 67 ~~p~vv~lHG~~~---~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~ 140 (362)
..|+|||+||++. +.......+..++...|+.|+.+|||- .++......++|+.+++.++.++ +++++++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrl----aPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRL----APEHPFPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCC----CCCCCCCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 4799999999984 334445777888888999999999994 33344566788899999998875 6788999
Q ss_pred EEEEEEccchHHHHHHHHhCC-----CccEEEEcCCccccchhccc---ccc---------c-ccccc------------
Q 018008 141 IILYGQSVGSGPTLELAVRLP-----RLRAVILHSPILSGLRVMYP---VKR---------T-FWFDI------------ 190 (362)
Q Consensus 141 i~l~GhS~Gg~ia~~~a~~~p-----~v~~~vl~~p~~~~~~~~~~---~~~---------~-~~~~~------------ 190 (362)
|+++|+|.||++++.++.... ...+.++++|+++....... ... . .+...
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 233 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPE 233 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCHHHHHHHHHHHhCcCccccCCCc
Confidence 999999999999999887543 47999999998765430000 000 0 00000
Q ss_pred ccc--cCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC---cceEEeCCCCc
Q 018008 191 YKN--IDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK---YEPLWLKGGNH 241 (362)
Q Consensus 191 ~~~--~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~---~~~~~i~g~~h 241 (362)
... ...+.. -.|+++++|+.|.+.+ +++.+.+.+... ++...++|..|
T Consensus 234 ~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H 286 (312)
T COG0657 234 ASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIH 286 (312)
T ss_pred cCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcce
Confidence 000 011222 3589999999999876 777788877753 33334444444
No 89
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.49 E-value=9.5e-13 Score=130.40 Aligned_cols=125 Identities=18% Similarity=0.130 Sum_probs=96.4
Q ss_pred EEcCCCCEEEEEEEeCC--CCCeEEEEeCCCcCChh---chHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc--cchHH
Q 018008 49 LSTKKGNEIVAMYVKNP--SASLTVLYSHGNAADLG---QMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE--QDTYA 121 (362)
Q Consensus 49 i~~~~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~~---~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~ 121 (362)
|++.||.+|.+.++.+. ++.|+||++||++.+.. .+.......+...||.|+++|+||+|.|.+.... ....+
T Consensus 1 i~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~ 80 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAA 80 (550)
T ss_pred CcCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccch
Confidence 45678999987766553 35689999999987643 1222233455778999999999999999875322 34668
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccc
Q 018008 122 DIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILS 174 (362)
Q Consensus 122 d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~ 174 (362)
|+.++++++.++.. ...+|+++|||+||.+++.+|...| .++++|..+++.+
T Consensus 81 D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 99999999987733 3369999999999999999999876 5999999887654
No 90
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.49 E-value=1.2e-12 Score=112.79 Aligned_cols=161 Identities=19% Similarity=0.178 Sum_probs=110.0
Q ss_pred CCeEEEEeCCCcCChhchHH--HHHHHHHhcCeEEEEEccCCCcCCCC--------CCCccchHHHHHHHHHHHHHHhCC
Q 018008 67 ASLTVLYSHGNAADLGQMCP--IFTELSVHLNVSLMGYDYSGYGHSSG--------KPSEQDTYADIEAAYKCLEETYGV 136 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~~G~G~s~~--------~~~~~~~~~d~~~~i~~l~~~~~~ 136 (362)
+.|+||++||.+.+...+.. .+.+++.+.||.|+.++......... ..........+..+++++..++++
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 45899999999998876654 45678888999999998642211110 011123445678889999999999
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc--------hhccccc---cccccccccccCCCCCCCCCE
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL--------RVMYPVK---RTFWFDIYKNIDKIPLVECPV 204 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~i~~P~ 204 (362)
|+++|++.|+|.||+++..+++.+|+ +.++..+++..-+. ..+..-. ...+.......... ...|+
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~--~~~P~ 172 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAY--PGYPR 172 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCC--CCCCE
Confidence 99999999999999999999999997 77777776543211 1111000 00010111111111 24699
Q ss_pred EEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 205 LVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 205 lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
+++||+.|..|.+....++.+.+..
T Consensus 173 ~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 173 IVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred EEEecCCCCccCcchHHHHHHHHHH
Confidence 9999999999999999888887664
No 91
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.48 E-value=3.1e-13 Score=117.25 Aligned_cols=164 Identities=26% Similarity=0.379 Sum_probs=106.9
Q ss_pred EEEeCCCcCC---hhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHH---hCCCCCcEEEE
Q 018008 71 VLYSHGNAAD---LGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEET---YGVKEEDIILY 144 (362)
Q Consensus 71 vv~lHG~~~~---~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~i~l~ 144 (362)
||++||++.. ..........++.+.|+.|+.+|||-. ++......++|+.+++.++.++ ++++.++|+|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~----p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 76 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA----PEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLI 76 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T----TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc----ccccccccccccccceeeeccccccccccccceEEe
Confidence 7999998853 344456667776668999999999943 3444567889999999999987 66777999999
Q ss_pred EEccchHHHHHHHHhC-----CCccEEEEcCCccccch----hc---ccccc-cc--------ccc-----------ccc
Q 018008 145 GQSVGSGPTLELAVRL-----PRLRAVILHSPILSGLR----VM---YPVKR-TF--------WFD-----------IYK 192 (362)
Q Consensus 145 GhS~Gg~ia~~~a~~~-----p~v~~~vl~~p~~~~~~----~~---~~~~~-~~--------~~~-----------~~~ 192 (362)
|+|.||.+++.++... +.++++++++|+.+... .. ..... .. +.. ...
T Consensus 77 G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 156 (211)
T PF07859_consen 77 GDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDPLAS 156 (211)
T ss_dssp EETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTSTTTS
T ss_pred ecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999998743 23899999999864410 00 00000 00 000 011
Q ss_pred ccC--CCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC---cceEEeCCCCc
Q 018008 193 NID--KIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK---YEPLWLKGGNH 241 (362)
Q Consensus 193 ~~~--~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~---~~~~~i~g~~h 241 (362)
+.. .++. -.|+++++|+.|.++ .++..+.+.+++. .+++.++|..|
T Consensus 157 p~~~~~~~~-~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H 207 (211)
T PF07859_consen 157 PLNASDLKG-LPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPH 207 (211)
T ss_dssp GGGSSCCTT-CHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEET
T ss_pred ccccccccc-CCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeE
Confidence 111 1221 348999999999774 5778888888764 34444455544
No 92
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.46 E-value=4.4e-12 Score=115.87 Aligned_cols=216 Identities=19% Similarity=0.234 Sum_probs=139.7
Q ss_pred eeEEEEEcCCCCEEEEEEEeCC-----CCCeEEEEeCCCcCCh-----hchHHHHHHHHHhcCeEEEEEccCCCcCCCCC
Q 018008 44 VDVLKLSTKKGNEIVAMYVKNP-----SASLTVLYSHGNAADL-----GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGK 113 (362)
Q Consensus 44 ~~~~~i~~~~g~~l~~~~~~~~-----~~~p~vv~lHG~~~~~-----~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~ 113 (362)
+-...+.....+.+....|.+. ...|+|||+||+|... ..+......++.+.+..|+.+||| -.++
T Consensus 61 v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR----LAPE 136 (336)
T KOG1515|consen 61 VTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR----LAPE 136 (336)
T ss_pred ceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc----cCCC
Confidence 4344444444444444444332 3569999999998533 345567777778899999999999 4445
Q ss_pred CCccchHHHHHHHHHHHHHH----hCCCCCcEEEEEEccchHHHHHHHHhC-------CCccEEEEcCCccccchhcccc
Q 018008 114 PSEQDTYADIEAAYKCLEET----YGVKEEDIILYGQSVGSGPTLELAVRL-------PRLRAVILHSPILSGLRVMYPV 182 (362)
Q Consensus 114 ~~~~~~~~d~~~~i~~l~~~----~~~~~~~i~l~GhS~Gg~ia~~~a~~~-------p~v~~~vl~~p~~~~~~~~~~~ 182 (362)
......++|...++.++.++ ++.|+++++|+|-|.||.+|..++.+. +.+++.|++.|++.+.....+.
T Consensus 137 h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e 216 (336)
T KOG1515|consen 137 HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESE 216 (336)
T ss_pred CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHH
Confidence 55566788988999998874 677889999999999999999987642 3599999999998754322210
Q ss_pred c---------------ccccc-----------cc-ccccC-----CCCCCCC-CEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 183 K---------------RTFWF-----------DI-YKNID-----KIPLVEC-PVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 183 ~---------------~~~~~-----------~~-~~~~~-----~~~~i~~-P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
. ..+|. +. .+... ...-..+ |+|++.++.|... .++..+++++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk 294 (336)
T KOG1515|consen 217 KQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKK 294 (336)
T ss_pred HHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHH
Confidence 0 01111 00 01111 1222334 5999999999774 667777777765
Q ss_pred C---cceEEeCCCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 230 K---YEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 230 ~---~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
. .+.+.++++.|......+. .+...+..+.+.+|+.
T Consensus 295 ~Gv~v~~~~~e~~~H~~~~~~~~------~~~a~~~~~~i~~fi~ 333 (336)
T KOG1515|consen 295 AGVEVTLIHYEDGFHGFHILDPS------SKEAHALMDAIVEFIK 333 (336)
T ss_pred cCCeEEEEEECCCeeEEEecCCc------hhhHHHHHHHHHHHHh
Confidence 3 3445677888866555554 2333445555666664
No 93
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.45 E-value=9.5e-13 Score=109.70 Aligned_cols=151 Identities=21% Similarity=0.292 Sum_probs=94.1
Q ss_pred EEEeCCCcCCh-hchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccc
Q 018008 71 VLYSHGNAADL-GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVG 149 (362)
Q Consensus 71 vv~lHG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~G 149 (362)
|+++||++++. ..|+..+.+.+... +.|-..|+. .+ ++.+.+..+.++.+...++++|+|||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~-------~P-------~~~~W~~~l~~~i~~~~~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD-------NP-------DLDEWVQALDQAIDAIDEPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T-------S---------HHHHHHHHHHCCHC-TTTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC-------CC-------CHHHHHHHHHHHHhhcCCCeEEEEeCHH
Confidence 68999998764 77888888876665 665555441 12 3444555555544333367999999999
Q ss_pred hHHHHHHHH-hCC-CccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHh
Q 018008 150 SGPTLELAV-RLP-RLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELC 227 (362)
Q Consensus 150 g~ia~~~a~-~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~ 227 (362)
+..++.+++ ... +|.+++|++|+....... .......+..... ....+|.++|.+++|+++|++.++.+++.+
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~----~~~~~~~f~~~p~-~~l~~~~~viaS~nDp~vp~~~a~~~A~~l 140 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPDDPEP----FPPELDGFTPLPR-DPLPFPSIVIASDNDPYVPFERAQRLAQRL 140 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCGCHHC----CTCGGCCCTTSHC-CHHHCCEEEEEETTBSSS-HHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcccccc----hhhhccccccCcc-cccCCCeEEEEcCCCCccCHHHHHHHHHHc
Confidence 999999994 444 499999999986520000 0011111111111 234567899999999999999999999999
Q ss_pred ccCcceEEeCCCCcCc
Q 018008 228 KDKYEPLWLKGGNHCN 243 (362)
Q Consensus 228 ~~~~~~~~i~g~~h~~ 243 (362)
.. +++.++++||+.
T Consensus 141 ~a--~~~~~~~~GHf~ 154 (171)
T PF06821_consen 141 GA--ELIILGGGGHFN 154 (171)
T ss_dssp T---EEEEETS-TTSS
T ss_pred CC--CeEECCCCCCcc
Confidence 75 566677777743
No 94
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.44 E-value=3.6e-13 Score=122.57 Aligned_cols=185 Identities=16% Similarity=0.198 Sum_probs=103.0
Q ss_pred CCeeEEEEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhch-----------------HHHHHHHHHhcCeEEEE
Q 018008 42 DDVDVLKLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQM-----------------CPIFTELSVHLNVSLMG 101 (362)
Q Consensus 42 ~~~~~~~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~-----------------~~~~~~l~~~~g~~vi~ 101 (362)
+..|.+.+.+..+..+.++++.|. ++.|+||++||-++..... ...+...+.++||.|++
T Consensus 86 Y~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla 165 (390)
T PF12715_consen 86 YTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLA 165 (390)
T ss_dssp EEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEE
T ss_pred eEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEE
Confidence 467788888888988887765544 3568999999987654221 11233445788999999
Q ss_pred EccCCCcCCCCCCCcc----c---hH----------------HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHH
Q 018008 102 YDYSGYGHSSGKPSEQ----D---TY----------------ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 102 ~D~~G~G~s~~~~~~~----~---~~----------------~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
+|.+|+|+........ . .+ -|...++++|...-.+|+++|+++|+||||..++.+++
T Consensus 166 ~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaA 245 (390)
T PF12715_consen 166 PDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAA 245 (390)
T ss_dssp E--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred EccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHH
Confidence 9999999876422110 0 00 14456788888777888899999999999999999999
Q ss_pred hCCCccEEEEcCCccccc---hhcc-cc-------cc---ccccccccc-----cCCCCCCCCCEEEEEeCCCCCCCchh
Q 018008 159 RLPRLRAVILHSPILSGL---RVMY-PV-------KR---TFWFDIYKN-----IDKIPLVECPVLVIHGTEDEVVDFSH 219 (362)
Q Consensus 159 ~~p~v~~~vl~~p~~~~~---~~~~-~~-------~~---~~~~~~~~~-----~~~~~~i~~P~lvi~G~~D~~v~~~~ 219 (362)
..++|++.|..+-+.... ..+. +. .. .+....+.. +..+- ...|+|++.|..|..++.
T Consensus 246 LDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasli-APRPll~~nG~~Dklf~i-- 322 (390)
T PF12715_consen 246 LDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLI-APRPLLFENGGKDKLFPI-- 322 (390)
T ss_dssp H-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTT-TTS-EEESS-B-HHHHHH--
T ss_pred cchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHh-CCCcchhhcCCcccccHH--
Confidence 999999988766543211 1110 00 00 011111110 11111 256999999999988644
Q ss_pred HHHHHHHhcc
Q 018008 220 GKQLWELCKD 229 (362)
Q Consensus 220 ~~~l~~~~~~ 229 (362)
.+..++....
T Consensus 323 V~~AY~~~~~ 332 (390)
T PF12715_consen 323 VRRAYAIMGA 332 (390)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHhcCC
Confidence 6666666553
No 95
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.43 E-value=2.3e-12 Score=136.02 Aligned_cols=195 Identities=16% Similarity=0.173 Sum_probs=120.8
Q ss_pred CCeEEEEeCCCcCChhchHHH----HHHHHHhcCeEEEEEccCCCcCCCCCCC-ccchHH-HH---HHHHHHHHHHhCCC
Q 018008 67 ASLTVLYSHGNAADLGQMCPI----FTELSVHLNVSLMGYDYSGYGHSSGKPS-EQDTYA-DI---EAAYKCLEETYGVK 137 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~----~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~-d~---~~~i~~l~~~~~~~ 137 (362)
.+++||++||++.+...|... +...+.+.||.|+++|+ |.+..... ....+. ++ .+.++.+.+. ..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~-~~- 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDV-TG- 140 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHh-hC-
Confidence 458999999999887666543 23444777999999995 55443211 112222 22 2333333223 22
Q ss_pred CCcEEEEEEccchHHHHHHHHhC-C-CccEEEEcCCccccc-----h-------h-------------------------
Q 018008 138 EEDIILYGQSVGSGPTLELAVRL-P-RLRAVILHSPILSGL-----R-------V------------------------- 178 (362)
Q Consensus 138 ~~~i~l~GhS~Gg~ia~~~a~~~-p-~v~~~vl~~p~~~~~-----~-------~------------------------- 178 (362)
++++++||||||.+++.+++.+ + +|+++|++++.++.. . .
T Consensus 141 -~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 219 (994)
T PRK07868 141 -RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQ 219 (994)
T ss_pred -CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHH
Confidence 6899999999999999988755 4 499998865442210 0 0
Q ss_pred -cccc-------------c-c---------------ccccc------------ccc--c-------c----CCCCCCCCC
Q 018008 179 -MYPV-------------K-R---------------TFWFD------------IYK--N-------I----DKIPLVECP 203 (362)
Q Consensus 179 -~~~~-------------~-~---------------~~~~~------------~~~--~-------~----~~~~~i~~P 203 (362)
+.+. . . ..|.. .+. . + ..++++++|
T Consensus 220 ~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P 299 (994)
T PRK07868 220 MLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCP 299 (994)
T ss_pred hcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCC
Confidence 0000 0 0 00100 000 0 0 136788999
Q ss_pred EEEEEeCCCCCCCchhHHHHHHHhccCcce-EEeCCCCcCccccCCCCCcccCCcchhhhcccccccccCCCCC
Q 018008 204 VLVIHGTEDEVVDFSHGKQLWELCKDKYEP-LWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEKLRPS 276 (362)
Q Consensus 204 ~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~-~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~~~~~ 276 (362)
+|+|+|++|.+++++.++.+.+.+++. +. ..++++||. +++.--..+++++..+.+||.+....
T Consensus 300 ~L~i~G~~D~ivp~~~~~~l~~~i~~a-~~~~~~~~~GH~--------g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 300 VLAFVGEVDDIGQPASVRGIRRAAPNA-EVYESLIRAGHF--------GLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCC-eEEEEeCCCCCE--------eeeechhhhhhhChHHHHHHHHhccC
Confidence 999999999999999999999888753 33 445565563 22233355677888899999865443
No 96
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.42 E-value=1.5e-12 Score=111.24 Aligned_cols=188 Identities=20% Similarity=0.252 Sum_probs=126.0
Q ss_pred CCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhC--CCCCcEE
Q 018008 65 PSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYG--VKEEDII 142 (362)
Q Consensus 65 ~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~--~~~~~i~ 142 (362)
+++++-++++|=.|++...|..+...+.. .+.++++++||+|..-+.+. ..|+....+.+...+. ....++.
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~--~iel~avqlPGR~~r~~ep~----~~di~~Lad~la~el~~~~~d~P~a 77 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPA--DIELLAVQLPGRGDRFGEPL----LTDIESLADELANELLPPLLDAPFA 77 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCc--hhheeeecCCCcccccCCcc----cccHHHHHHHHHHHhccccCCCCee
Confidence 45677888888888888777777665533 57889999999998764443 2334444444444433 3447899
Q ss_pred EEEEccchHHHHHHHHhCCC----ccEEEEcCCccccchh------------------ccccccccc-------------
Q 018008 143 LYGQSVGSGPTLELAVRLPR----LRAVILHSPILSGLRV------------------MYPVKRTFW------------- 187 (362)
Q Consensus 143 l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p~~~~~~~------------------~~~~~~~~~------------- 187 (362)
++||||||++|..+|.+..+ +.++++.+........ +.......+
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPil 157 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPIL 157 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHH
Confidence 99999999999999987542 6667766532221100 000000000
Q ss_pred ------cccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhh
Q 018008 188 ------FDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQEN 261 (362)
Q Consensus 188 ------~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~ 261 (362)
.+.|..... ..+.||+.++.|++|..+..+....+.+..++. +.+..+++ ||+...++.++
T Consensus 158 RAD~~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~-----------f~l~~fdG-gHFfl~~~~~~ 224 (244)
T COG3208 158 RADFRALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTKGD-----------FTLRVFDG-GHFFLNQQREE 224 (244)
T ss_pred HHHHHHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhcCC-----------ceEEEecC-cceehhhhHHH
Confidence 112222222 458999999999999999999988888887764 44555554 88988899888
Q ss_pred hccccccccc
Q 018008 262 QRNNTEQKTE 271 (362)
Q Consensus 262 ~~~~i~~fl~ 271 (362)
+...+.+.+.
T Consensus 225 v~~~i~~~l~ 234 (244)
T COG3208 225 VLARLEQHLA 234 (244)
T ss_pred HHHHHHHHhh
Confidence 8888877775
No 97
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.40 E-value=3e-11 Score=105.62 Aligned_cols=172 Identities=17% Similarity=0.156 Sum_probs=111.0
Q ss_pred CCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHh--------C
Q 018008 64 NPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETY--------G 135 (362)
Q Consensus 64 ~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~--------~ 135 (362)
..+.-|+|||+||+.... .||..+.+..+.+||.|+++|+...+. .......+++.+.++|+.+.+ .
T Consensus 13 ~~g~yPVv~f~~G~~~~~-s~Ys~ll~hvAShGyIVV~~d~~~~~~----~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLIN-SWYSQLLEHVASHGYIVVAPDLYSIGG----PDDTDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred CCCCcCEEEEeCCcCCCH-HHHHHHHHHHHhCceEEEEecccccCC----CCcchhHHHHHHHHHHHHhcchhhcccccc
Confidence 346779999999999554 445555555588999999999665322 233456677888888876632 1
Q ss_pred CCCCcEEEEEEccchHHHHHHHHhC-----C-CccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEe
Q 018008 136 VKEEDIILYGQSVGSGPTLELAVRL-----P-RLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHG 209 (362)
Q Consensus 136 ~~~~~i~l~GhS~Gg~ia~~~a~~~-----p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G 209 (362)
.|-.++.|+|||.||-+++.++..+ . .++++|+++|+-. .....+... ..+.....--...+|+++|-.
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG-~~~~~~~~P----~v~~~~p~s~~~~~P~lviGt 162 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG-MSKGSQTEP----PVLTYTPQSFDFSMPALVIGT 162 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc-cccccCCCC----ccccCcccccCCCCCeEEEec
Confidence 2457999999999999999999886 2 5999999999862 111111111 111111222235689999977
Q ss_pred CCCCC--------CCc--hhHHHHHHHhccCcceEEeCCCCcCccc
Q 018008 210 TEDEV--------VDF--SHGKQLWELCKDKYEPLWLKGGNHCNLE 245 (362)
Q Consensus 210 ~~D~~--------v~~--~~~~~l~~~~~~~~~~~~i~g~~h~~~~ 245 (362)
..+.. +-+ .+-+++++.++...-.+...+.||+++.
T Consensus 163 GLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~L 208 (259)
T PF12740_consen 163 GLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFL 208 (259)
T ss_pred ccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhh
Confidence 76642 222 2567888888765444444555554443
No 98
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.39 E-value=4.7e-12 Score=119.56 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=80.6
Q ss_pred CCCeEEEEeCCCcCCh--hchHH-HHHHHHHhc-CeEEEEEccCCCcCCCCCCCccch---HHHHHHHHHHHHHHhCCCC
Q 018008 66 SASLTVLYSHGNAADL--GQMCP-IFTELSVHL-NVSLMGYDYSGYGHSSGKPSEQDT---YADIEAAYKCLEETYGVKE 138 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~--~~~~~-~~~~l~~~~-g~~vi~~D~~G~G~s~~~~~~~~~---~~d~~~~i~~l~~~~~~~~ 138 (362)
..+|++|++||++.+. ..|.. +...++... .++|+++|++|+|.+.......+. -+++.+.++.|.+.++++.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 3578999999998653 34555 333443333 699999999999987633222221 2456777777776666666
Q ss_pred CcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccc
Q 018008 139 EDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILS 174 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~ 174 (362)
++++|+||||||.++..++...| +|.++++++|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 89999999999999999999888 4999999998654
No 99
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=6e-12 Score=127.49 Aligned_cols=219 Identities=16% Similarity=0.145 Sum_probs=147.9
Q ss_pred CeeEEEEEcCCCCEEEEEEEeCCC-----CCeEEEEeCCCcCCh----hchHHHHHHHHHhcCeEEEEEccCCCcCCCCC
Q 018008 43 DVDVLKLSTKKGNEIVAMYVKNPS-----ASLTVLYSHGNAADL----GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGK 113 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~~~~-----~~p~vv~lHG~~~~~----~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~ 113 (362)
..+..++.- +|....+....|+. .-|++|.+||+..+. .....+...++...|+.|+.+|.||-|.....
T Consensus 497 ~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 497 IVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred cceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchh
Confidence 344444444 77777776666542 458999999998632 11123333456788999999999997665422
Q ss_pred -------CCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-C-ccEEEEcCCccccchhcccccc
Q 018008 114 -------PSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-R-LRAVILHSPILSGLRVMYPVKR 184 (362)
Q Consensus 114 -------~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~-v~~~vl~~p~~~~~~~~~~~~~ 184 (362)
......+.|...+++.+++..-+|.+++.++|+|.||++++.++...| + +++.+.++|+.+.. .....-.
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~t 654 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYT 654 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eeccccc
Confidence 111346689999999999988889999999999999999999999998 5 67779999998743 1111100
Q ss_pred cc-------c---cccccccCCCCCCCCCE-EEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcc
Q 018008 185 TF-------W---FDIYKNIDKIPLVECPV-LVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSE 253 (362)
Q Consensus 185 ~~-------~---~~~~~~~~~~~~i~~P~-lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~ 253 (362)
.. . .........+..++.|. |++||+.|..|+.+++..+.++++.+ +-.+.+.++|+..|.
T Consensus 655 erymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~--------gv~~~~~vypde~H~ 726 (755)
T KOG2100|consen 655 ERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNA--------GVPFRLLVYPDENHG 726 (755)
T ss_pred HhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHC--------CCceEEEEeCCCCcc
Confidence 00 0 11122233344455555 99999999999999999999998864 224677777887877
Q ss_pred cCCcch-hhhccccccccc
Q 018008 254 QGSDQQ-ENQRNNTEQKTE 271 (362)
Q Consensus 254 ~~~e~~-~~~~~~i~~fl~ 271 (362)
...... ......+..|+.
T Consensus 727 is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 727 ISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred cccccchHHHHHHHHHHHH
Confidence 654331 233355556664
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.39 E-value=1.4e-11 Score=97.52 Aligned_cols=189 Identities=16% Similarity=0.189 Sum_probs=119.1
Q ss_pred CCeEEEEeCCCcCChh-chHHHHHHHHHhcCeEEEEEccCCC-----cCCCCCCCccchHHHHHHHHHHHHHHhCCCCCc
Q 018008 67 ASLTVLYSHGNAADLG-QMCPIFTELSVHLNVSLMGYDYSGY-----GHSSGKPSEQDTYADIEAAYKCLEETYGVKEED 140 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~-~~~~~~~~l~~~~g~~vi~~D~~G~-----G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 140 (362)
..-+||+.||.|.+.. .....+...+...|+.|.-++++.. |...+++...........++.++.... ...+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l--~~gp 90 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL--AEGP 90 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc--cCCc
Confidence 4458999999987653 2344555555888999999998754 322222222233355666677777665 3379
Q ss_pred EEEEEEccchHHHHHHHHhCC-CccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCCchh
Q 018008 141 IILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSH 219 (362)
Q Consensus 141 i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~ 219 (362)
+++-|+||||-++.+++.... .|+++++++-.+. ..--.+.. ..+.+.-+++|+||.+|+.|++-..+.
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh---------ppGKPe~~-Rt~HL~gl~tPtli~qGtrD~fGtr~~ 160 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH---------PPGKPEQL-RTEHLTGLKTPTLITQGTRDEFGTRDE 160 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccC---------CCCCcccc-hhhhccCCCCCeEEeecccccccCHHH
Confidence 999999999999999887655 5999998762221 11111111 124566688999999999999876665
Q ss_pred HHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccccc
Q 018008 220 GKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQKT 270 (362)
Q Consensus 220 ~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl 270 (362)
.. .-.+....+++|++++.| ++.-......+...++....++.+..|+
T Consensus 161 Va--~y~ls~~iev~wl~~adH-DLkp~k~vsgls~~~hL~~~A~~va~~~ 208 (213)
T COG3571 161 VA--GYALSDPIEVVWLEDADH-DLKPRKLVSGLSTADHLKTLAEQVAGWA 208 (213)
T ss_pred HH--hhhcCCceEEEEeccCcc-ccccccccccccHHHHHHHHHHHHHHHH
Confidence 52 223556689999999998 3322222222233333344444455554
No 101
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.37 E-value=3.7e-12 Score=106.69 Aligned_cols=155 Identities=18% Similarity=0.118 Sum_probs=110.3
Q ss_pred EEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCC-cCCCC-C----------CCccchHHHHH
Q 018008 57 IVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGY-GHSSG-K----------PSEQDTYADIE 124 (362)
Q Consensus 57 l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~s~~-~----------~~~~~~~~d~~ 124 (362)
+.+|......++.+||.+-.+.+....-....+..++..||.|+++|+-.- -.+.. . ........++.
T Consensus 28 ldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~ 107 (242)
T KOG3043|consen 28 LDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDIT 107 (242)
T ss_pred eeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHH
Confidence 344444444455577777776554433233344444666999999997531 11111 0 01123457889
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhccccccccccccccccCCCCCCCCCE
Q 018008 125 AAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPV 204 (362)
Q Consensus 125 ~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 204 (362)
..+++|..+.. ..+|.++|++|||.++..+....|.+.+++...|... ..+++..+++|+
T Consensus 108 ~v~k~lk~~g~--~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~------------------d~~D~~~vk~Pi 167 (242)
T KOG3043|consen 108 AVVKWLKNHGD--SKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFV------------------DSADIANVKAPI 167 (242)
T ss_pred HHHHHHHHcCC--cceeeEEEEeecceEEEEeeccchhheeeeEecCCcC------------------ChhHHhcCCCCE
Confidence 99999986653 3899999999999999999999888888888776542 245677788999
Q ss_pred EEEEeCCCCCCCchhHHHHHHHhccCc
Q 018008 205 LVIHGTEDEVVDFSHGKQLWELCKDKY 231 (362)
Q Consensus 205 lvi~G~~D~~v~~~~~~~l~~~~~~~~ 231 (362)
|++.|+.|+.+|+....++-+.++++.
T Consensus 168 lfl~ae~D~~~p~~~v~~~ee~lk~~~ 194 (242)
T KOG3043|consen 168 LFLFAELDEDVPPKDVKAWEEKLKENP 194 (242)
T ss_pred EEEeecccccCCHHHHHHHHHHHhcCc
Confidence 999999999999999999999888753
No 102
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.37 E-value=3.4e-12 Score=115.08 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=82.5
Q ss_pred CCCeEEEEeCCCcCCh-hchHHHHH-HHHHhcCeEEEEEccCCCcCCCCCCCccc----hHHHHHHHHHHHHHHhCCCCC
Q 018008 66 SASLTVLYSHGNAADL-GQMCPIFT-ELSVHLNVSLMGYDYSGYGHSSGKPSEQD----TYADIEAAYKCLEETYGVKEE 139 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~-~~~~~~~~-~l~~~~g~~vi~~D~~G~G~s~~~~~~~~----~~~d~~~~i~~l~~~~~~~~~ 139 (362)
..+|++|++||++++. ..|...+. .++...+++|+++|+++++... .+.... ..+++...++.+.+..+++.+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN-YPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccC-hHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 4578999999999887 56666554 4555568999999999873322 111111 125677788888777666668
Q ss_pred cEEEEEEccchHHHHHHHHhCC-CccEEEEcCCcccc
Q 018008 140 DIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSG 175 (362)
Q Consensus 140 ~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~ 175 (362)
+++|+||||||.++..++...| +|.++++++|....
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 9999999999999999999988 59999999987643
No 103
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.37 E-value=6.6e-12 Score=113.42 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=87.2
Q ss_pred CCCEEEEEEEeC----CCCCeEEEEeCCCcCChhchHHHH---H------HHHHhcCeEEEEEccCCCcCCCCCCCc--c
Q 018008 53 KGNEIVAMYVKN----PSASLTVLYSHGNAADLGQMCPIF---T------ELSVHLNVSLMGYDYSGYGHSSGKPSE--Q 117 (362)
Q Consensus 53 ~g~~l~~~~~~~----~~~~p~vv~lHG~~~~~~~~~~~~---~------~l~~~~g~~vi~~D~~G~G~s~~~~~~--~ 117 (362)
||.+|.+..+.| .++.|+||..|+++.......... . ..+.+.||.|+.+|.||.|.|.+.... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~ 80 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSP 80 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSH
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCCh
Confidence 677887765544 245699999999986531111111 1 125788999999999999999986433 4
Q ss_pred chHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCcccc
Q 018008 118 DTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILSG 175 (362)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~ 175 (362)
...+|..++|+++.++ .+...+|.++|.|++|..++.+|+..| .+++++...+..+.
T Consensus 81 ~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 81 NEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred hHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 4668999999999998 666679999999999999999999554 79999998876553
No 104
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=2e-11 Score=115.91 Aligned_cols=218 Identities=19% Similarity=0.226 Sum_probs=143.7
Q ss_pred eEEEEEcCCCCEEEEEEEeCC-----CCCeEEEEeCCCcCCh---hch----HHHHHHHHHhcCeEEEEEccCCCcCCCC
Q 018008 45 DVLKLSTKKGNEIVAMYVKNP-----SASLTVLYSHGNAADL---GQM----CPIFTELSVHLNVSLMGYDYSGYGHSSG 112 (362)
Q Consensus 45 ~~~~i~~~~g~~l~~~~~~~~-----~~~p~vv~lHG~~~~~---~~~----~~~~~~l~~~~g~~vi~~D~~G~G~s~~ 112 (362)
|.+.+.+..|..+.++.+.+. .+.|+++++-|+.+-. ..| +-.+..| +.+||.|+.+|-||.-...-
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~L-aslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRL-ASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhh-hhcceEEEEEcCCCccccch
Confidence 557778888899988888764 2459999999997521 111 2223334 77899999999999544321
Q ss_pred CC-------CccchHHHHHHHHHHHHHHhC-CCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc--hhccc
Q 018008 113 KP-------SEQDTYADIEAAYKCLEETYG-VKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL--RVMYP 181 (362)
Q Consensus 113 ~~-------~~~~~~~d~~~~i~~l~~~~~-~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~--~~~~~ 181 (362)
+. -..-.++|..+.+.+|.+++| +|.++|++-|+|+||++++++.+++|+ ++.+|.-+|+.+-. +..+.
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYT 772 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYT 772 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccch
Confidence 11 112245889999999999996 478999999999999999999999998 56677767765421 11110
Q ss_pred cc---------ccccc-ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCC
Q 018008 182 VK---------RTFWF-DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENV 251 (362)
Q Consensus 182 ~~---------~~~~~-~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~ 251 (362)
.. ..|.. ......+.++.-+...|++||--|+.|...+.-.+...+.+.-+ ...+.+||+..
T Consensus 773 ERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagK--------pyeL~IfP~ER 844 (867)
T KOG2281|consen 773 ERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGK--------PYELQIFPNER 844 (867)
T ss_pred hhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCC--------ceEEEEccccc
Confidence 00 00000 01112344554455699999999999999999999988865422 24667777777
Q ss_pred cccCC-cchhhhccccccccc
Q 018008 252 SEQGS-DQQENQRNNTEQKTE 271 (362)
Q Consensus 252 H~~~~-e~~~~~~~~i~~fl~ 271 (362)
|.+-. |...-+-..+..|++
T Consensus 845 HsiR~~es~~~yE~rll~FlQ 865 (867)
T KOG2281|consen 845 HSIRNPESGIYYEARLLHFLQ 865 (867)
T ss_pred cccCCCccchhHHHHHHHHHh
Confidence 76532 222333344556654
No 105
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.36 E-value=1e-12 Score=116.19 Aligned_cols=174 Identities=26% Similarity=0.413 Sum_probs=135.2
Q ss_pred CCeeEEEEEcCCCCEEEEEEEeCC-----CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc
Q 018008 42 DDVDVLKLSTKKGNEIVAMYVKNP-----SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE 116 (362)
Q Consensus 42 ~~~~~~~i~~~~g~~l~~~~~~~~-----~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~ 116 (362)
.+=...++++.||+++..+++... ..+..||++-|+.+-.+. ..+. -..+.||.|+.+++||++.|.+.+..
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~-tP~~lgYsvLGwNhPGFagSTG~P~p 288 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMN-TPAQLGYSVLGWNHPGFAGSTGLPYP 288 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeec-ChHHhCceeeccCCCCccccCCCCCc
Confidence 444577899999999998887643 135688888888763211 1122 22567999999999999999998888
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhcccccccccccc------
Q 018008 117 QDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKRTFWFDI------ 190 (362)
Q Consensus 117 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~~~~~~~------ 190 (362)
.+....+.+++.+.+..++...+.|+|+|+|.||..++++|..+|+|+++|+.+.+-+.+.......+.+|...
T Consensus 289 ~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiR 368 (517)
T KOG1553|consen 289 VNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIR 368 (517)
T ss_pred ccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHH
Confidence 88888889999999999999989999999999999999999999999999999987776554444444444322
Q ss_pred ----ccccCCCCCCCCCEEEEEeCCCCCCCch
Q 018008 191 ----YKNIDKIPLVECPVLVIHGTEDEVVDFS 218 (362)
Q Consensus 191 ----~~~~~~~~~i~~P~lvi~G~~D~~v~~~ 218 (362)
.++.+.+...+-|+.+|--++|+++...
T Consensus 369 nh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 369 NHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred HhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 2334455667889999999999887654
No 106
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.29 E-value=5.3e-11 Score=106.04 Aligned_cols=108 Identities=23% Similarity=0.269 Sum_probs=69.7
Q ss_pred CCeEEEEeCCCcCCh--hchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCC--CCCcEE
Q 018008 67 ASLTVLYSHGNAADL--GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGV--KEEDII 142 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~--~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~--~~~~i~ 142 (362)
+...|||+.|.+.+. -.|...+++.+...+|.++-+.++......+......+.+|+.+.+++|....+- ..++|+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIV 111 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIV 111 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EE
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEE
Confidence 567999999988654 3456666666677899999987653222222333567889999999999987321 338999
Q ss_pred EEEEccchHHHHHHHHhC------CCccEEEEcCCccc
Q 018008 143 LYGQSVGSGPTLELAVRL------PRLRAVILHSPILS 174 (362)
Q Consensus 143 l~GhS~Gg~ia~~~a~~~------p~v~~~vl~~p~~~ 174 (362)
|+|||.|+.-++.++... +.|+++|+-+|+.+
T Consensus 112 LmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 112 LMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp EEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred EEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 999999999999998865 34999999999765
No 107
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.28 E-value=1.4e-11 Score=103.58 Aligned_cols=180 Identities=15% Similarity=0.198 Sum_probs=118.4
Q ss_pred EEEEcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc--cch-----
Q 018008 47 LKLSTKKGNEIVAMYVKNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE--QDT----- 119 (362)
Q Consensus 47 ~~i~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~--~~~----- 119 (362)
+.+...||..+.+..++..+..+-.|++-|..+-...++..++.++...||.|+++||||.|+|...... ...
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA 87 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWA 87 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhh
Confidence 6688899999988877776665545555555555567788888888999999999999999999853222 111
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcC------Ccccc------------------
Q 018008 120 YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHS------PILSG------------------ 175 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~------p~~~~------------------ 175 (362)
..|+.+++..+.+... ..+.+.+|||+||.+.-.+. +++...+....+ +.+..
T Consensus 88 ~~D~~aal~~~~~~~~--~~P~y~vgHS~GGqa~gL~~-~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt 164 (281)
T COG4757 88 RLDFPAALAALKKALP--GHPLYFVGHSFGGQALGLLG-QHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLT 164 (281)
T ss_pred hcchHHHHHHHHhhCC--CCceEEeeccccceeecccc-cCcccceeeEeccccccccchhhhhcccceeeccccccchh
Confidence 2578888888887663 37999999999998766554 344332222211 11110
Q ss_pred -chhccc---------cc-------------ccccccc--c-cccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 176 -LRVMYP---------VK-------------RTFWFDI--Y-KNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 176 -~~~~~~---------~~-------------~~~~~~~--~-~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
.....+ .. +.++++. + ...+..+.+.+|++.+...+|+.+|+...+.+.+...+
T Consensus 165 ~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~n 244 (281)
T COG4757 165 FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRN 244 (281)
T ss_pred hccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhc
Confidence 000000 00 0011100 0 01233456899999999999999999999998888765
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.28 E-value=6.6e-11 Score=99.76 Aligned_cols=151 Identities=23% Similarity=0.291 Sum_probs=94.0
Q ss_pred EEEeCCCcCChhchH-HHHHHHHHhcC--eEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 018008 71 VLYSHGNAADLGQMC-PIFTELSVHLN--VSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 71 vv~lHG~~~~~~~~~-~~~~~l~~~~g--~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
|||+||+.++..... ..+.+.+.+.+ +.+.++|++ ...++..+.+..+++...- +.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~--~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKP--ENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCC--CCeEEEEEC
Confidence 799999998775543 45666666655 344555554 2234455556666666543 559999999
Q ss_pred cchHHHHHHHHhCCCccEEEEcCCccccchhccccc----cccccccc----------cccCCC-CCCCCCEEEEEeCCC
Q 018008 148 VGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVK----RTFWFDIY----------KNIDKI-PLVECPVLVIHGTED 212 (362)
Q Consensus 148 ~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~----~~~~~~~~----------~~~~~~-~~i~~P~lvi~G~~D 212 (362)
|||+.|..++.+++ +.+ |+++|.+.....+.... ..+|.+.+ ..++.. .....++++++++.|
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~D 145 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVLLQTGD 145 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEEEecCC
Confidence 99999999998885 555 88999886544332211 11211111 111111 223568999999999
Q ss_pred CCCCchhHHHHHHHhccCcceEEeCCCCc
Q 018008 213 EVVDFSHGKQLWELCKDKYEPLWLKGGNH 241 (362)
Q Consensus 213 ~~v~~~~~~~l~~~~~~~~~~~~i~g~~h 241 (362)
++++++.+...+..+ ..++.+|++|
T Consensus 146 EvLd~~~a~~~~~~~----~~~i~~ggdH 170 (187)
T PF05728_consen 146 EVLDYREAVAKYRGC----AQIIEEGGDH 170 (187)
T ss_pred cccCHHHHHHHhcCc----eEEEEeCCCC
Confidence 999996665544432 3334456566
No 109
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.26 E-value=2.9e-11 Score=99.77 Aligned_cols=187 Identities=11% Similarity=0.141 Sum_probs=124.4
Q ss_pred CCEEEEEEEeCCCCCeEEEEeCCCcC---ChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHH
Q 018008 54 GNEIVAMYVKNPSASLTVLYSHGNAA---DLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCL 130 (362)
Q Consensus 54 g~~l~~~~~~~~~~~p~vv~lHG~~~---~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l 130 (362)
|.++.-++. +....+++||+||+-. +...+.....-+ .+.||.|..++|- .+...........++..-++++
T Consensus 54 g~q~VDIwg-~~~~~klfIfIHGGYW~~g~rk~clsiv~~a-~~~gY~vasvgY~---l~~q~htL~qt~~~~~~gv~fi 128 (270)
T KOG4627|consen 54 GRQLVDIWG-STNQAKLFIFIHGGYWQEGDRKMCLSIVGPA-VRRGYRVASVGYN---LCPQVHTLEQTMTQFTHGVNFI 128 (270)
T ss_pred CceEEEEec-CCCCccEEEEEecchhhcCchhcccchhhhh-hhcCeEEEEeccC---cCcccccHHHHHHHHHHHHHHH
Confidence 344444443 3556789999999753 333444444444 6789998887654 3332223455778899999999
Q ss_pred HHHhCCCCCcEEEEEEccchHHHHHHHHh--CCCccEEEEcCCccccchhccccccc---ccc----ccccccCCCCCCC
Q 018008 131 EETYGVKEEDIILYGQSVGSGPTLELAVR--LPRLRAVILHSPILSGLRVMYPVKRT---FWF----DIYKNIDKIPLVE 201 (362)
Q Consensus 131 ~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~--~p~v~~~vl~~p~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~i~ 201 (362)
++.+. ..+.+.+.|||.|+++++.+..+ .|+|.|+++.+++............. ..- ..-.....+..++
T Consensus 129 lk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~v~ 207 (270)
T KOG4627|consen 129 LKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTDVT 207 (270)
T ss_pred HHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcCce
Confidence 99875 33667888999999999998875 46799999999876532221111000 000 0011123445678
Q ss_pred CCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcc
Q 018008 202 CPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQ 258 (362)
Q Consensus 202 ~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~ 258 (362)
.|+|++.|.+|.---.++.+.+...+.+ +.+..+++.+|+-.++.
T Consensus 208 ~~ilVv~~~~espklieQnrdf~~q~~~------------a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 208 VWILVVAAEHESPKLIEQNRDFADQLRK------------ASFTLFKNYDHYDIIEE 252 (270)
T ss_pred eeeeEeeecccCcHHHHhhhhHHHHhhh------------cceeecCCcchhhHHHH
Confidence 8999999999987777888888888775 67778888888766554
No 110
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.25 E-value=2.9e-10 Score=109.49 Aligned_cols=179 Identities=13% Similarity=0.160 Sum_probs=124.3
Q ss_pred CCeEEEEeCCCcCChhchH----HHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEE
Q 018008 67 ASLTVLYSHGNAADLGQMC----PIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDII 142 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~----~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~ 142 (362)
-+.+||+++.+....-.+. .-+.+++.+.|+.|+.+|+++-+.........+.++.+.++++.+.+..|. +++.
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~--~~vn 291 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGS--RDLN 291 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCC--CCee
Confidence 3578999999874322221 345556688899999999998777665555455557788889999888876 8999
Q ss_pred EEEEccchHHHHH----HHHhCC--CccEEEEcCCccccch------------------------------------hcc
Q 018008 143 LYGQSVGSGPTLE----LAVRLP--RLRAVILHSPILSGLR------------------------------------VMY 180 (362)
Q Consensus 143 l~GhS~Gg~ia~~----~a~~~p--~v~~~vl~~p~~~~~~------------------------------------~~~ 180 (362)
++|+|+||.+++. ++++.+ +|+.++++...++... .+.
T Consensus 292 l~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~Lr 371 (560)
T TIGR01839 292 LLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMR 371 (560)
T ss_pred EEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcC
Confidence 9999999999997 677776 3999998876554210 000
Q ss_pred cc-------c-------------cccccc---------------cc--cc------------cCCCCCCCCCEEEEEeCC
Q 018008 181 PV-------K-------------RTFWFD---------------IY--KN------------IDKIPLVECPVLVIHGTE 211 (362)
Q Consensus 181 ~~-------~-------------~~~~~~---------------~~--~~------------~~~~~~i~~P~lvi~G~~ 211 (362)
+. . ..+|.. .| +. .-.+++|+||+|++.|..
T Consensus 372 P~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~ 451 (560)
T TIGR01839 372 PNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTN 451 (560)
T ss_pred chhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCc
Confidence 00 0 000100 00 00 124567999999999999
Q ss_pred CCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCC
Q 018008 212 DEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYP 248 (362)
Q Consensus 212 D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~ 248 (362)
|.++|++.+..+.+.+...++.+.. .+||..-++-|
T Consensus 452 DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIggivnp 487 (560)
T TIGR01839 452 DHITPWDAVYRSALLLGGKRRFVLS-NSGHIQSILNP 487 (560)
T ss_pred CCcCCHHHHHHHHHHcCCCeEEEec-CCCccccccCC
Confidence 9999999999999999876555444 45686655544
No 111
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.25 E-value=7.4e-11 Score=119.96 Aligned_cols=143 Identities=17% Similarity=0.172 Sum_probs=103.5
Q ss_pred HHHHHHHhcCeEEEEEccCCCcCCCCCCCc--cchHHHHHHHHHHHHHH--------------hCCCCCcEEEEEEccch
Q 018008 87 IFTELSVHLNVSLMGYDYSGYGHSSGKPSE--QDTYADIEAAYKCLEET--------------YGVKEEDIILYGQSVGS 150 (362)
Q Consensus 87 ~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~d~~~~i~~l~~~--------------~~~~~~~i~l~GhS~Gg 150 (362)
.+..++..+||+|+.+|.||.|.|.|.... ....+|..++|+|+..+ ..+...+|+++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 344566888999999999999999986433 34568899999999853 22335799999999999
Q ss_pred HHHHHHHHhCC-CccEEEEcCCccccchhccc---------c-------------cc-----------cc----------
Q 018008 151 GPTLELAVRLP-RLRAVILHSPILSGLRVMYP---------V-------------KR-----------TF---------- 186 (362)
Q Consensus 151 ~ia~~~a~~~p-~v~~~vl~~p~~~~~~~~~~---------~-------------~~-----------~~---------- 186 (362)
.+++.+|...| .++++|..+++.+....... + .+ ..
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 429 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTA 429 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhh
Confidence 99999988765 69999998876542211000 0 00 00
Q ss_pred -----------ccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 187 -----------WFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 187 -----------~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
+++..+....+.++++|+|+|||..|..+++.++.++++.++.
T Consensus 430 ~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~ 483 (767)
T PRK05371 430 AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPE 483 (767)
T ss_pred hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHh
Confidence 0001112234567899999999999999999999999998864
No 112
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.24 E-value=1.2e-10 Score=108.64 Aligned_cols=133 Identities=18% Similarity=0.204 Sum_probs=105.8
Q ss_pred CCCCCeeEEEEEcCCCCEEEEEEEeCC-CCCeEEEEeCCCcCChhchH-----HHHHHHHHhcCeEEEEEccCCCcCCCC
Q 018008 39 HQRDDVDVLKLSTKKGNEIVAMYVKNP-SASLTVLYSHGNAADLGQMC-----PIFTELSVHLNVSLMGYDYSGYGHSSG 112 (362)
Q Consensus 39 ~~~~~~~~~~i~~~~g~~l~~~~~~~~-~~~p~vv~lHG~~~~~~~~~-----~~~~~l~~~~g~~vi~~D~~G~G~s~~ 112 (362)
.+..++|...+.|.||..+..-.++.. +++|+|++.||.-+++..|. .-++-++.+.||.|+.-+.||--.|..
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 356789999999999997766556555 78899999999988877774 346667789999999999999655532
Q ss_pred C----CC-c----cchH-----HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC----ccEEEEcCCcc
Q 018008 113 K----PS-E----QDTY-----ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR----LRAVILHSPIL 173 (362)
Q Consensus 113 ~----~~-~----~~~~-----~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p~~ 173 (362)
. +. . ..++ .|+.+.|+++++.-+. +++..+|||.|+...+.++...|+ |+.+++++|..
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~--~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ--EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc--cceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 1 11 1 1112 4889999999998876 899999999999999999998874 99999999865
No 113
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.22 E-value=5.8e-10 Score=95.77 Aligned_cols=154 Identities=17% Similarity=0.207 Sum_probs=103.1
Q ss_pred CCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhC--------C
Q 018008 65 PSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYG--------V 136 (362)
Q Consensus 65 ~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~--------~ 136 (362)
++.-|+|+|+||+......|.+++..+ ..+||.|+++++-.- . .+.....+++..++++|+.+.+. .
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HI-ASHGfIVVAPQl~~~---~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~ 117 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHI-ASHGFIVVAPQLYTL---F-PPDGQDEIKSAASVINWLPEGLQHVLPENVEA 117 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHH-hhcCeEEEechhhcc---c-CCCchHHHHHHHHHHHHHHhhhhhhCCCCccc
Confidence 456799999999988754444455544 888999999998742 1 24445667888889999877431 1
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCC---CccEEEEcCCccccch--hccccccccccccccccCCCCCCCCCEEEEEeCC
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLP---RLRAVILHSPILSGLR--VMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTE 211 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p---~v~~~vl~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~ 211 (362)
+..++.++|||.||-.|+.+|+.+. .+.++|.++|+...-. ...|...+|- ..--.+.+|+++|-..-
T Consensus 118 nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~-------p~SF~l~iPv~VIGtGL 190 (307)
T PF07224_consen 118 NLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYV-------PQSFDLDIPVLVIGTGL 190 (307)
T ss_pred ccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecC-------CcccccCCceEEEecCc
Confidence 3479999999999999999999774 3899999999864221 1111111111 11113568999987654
Q ss_pred C-------CCCCch--hHHHHHHHhccC
Q 018008 212 D-------EVVDFS--HGKQLWELCKDK 230 (362)
Q Consensus 212 D-------~~v~~~--~~~~l~~~~~~~ 230 (362)
- +-+.+. +-++++.+|+..
T Consensus 191 g~~~~~~~~~CaP~gvnH~eFf~eCk~p 218 (307)
T PF07224_consen 191 GPKRNPLFPPCAPDGVNHEEFFNECKPP 218 (307)
T ss_pred CccccCCCCCCCCCCcCHHHHHHhhccc
Confidence 4 222232 457788888865
No 114
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.21 E-value=5.5e-10 Score=97.83 Aligned_cols=175 Identities=19% Similarity=0.213 Sum_probs=111.3
Q ss_pred CCCEEEEEEEeCCC---CCeEEEEeCCCcCChhchHH--HHHHHHHhcCeEEEEEc-cCC------CcCCCCC---CCcc
Q 018008 53 KGNEIVAMYVKNPS---ASLTVLYSHGNAADLGQMCP--IFTELSVHLNVSLMGYD-YSG------YGHSSGK---PSEQ 117 (362)
Q Consensus 53 ~g~~l~~~~~~~~~---~~p~vv~lHG~~~~~~~~~~--~~~~l~~~~g~~vi~~D-~~G------~G~s~~~---~~~~ 117 (362)
+|....++++.+++ ..|+||++||.+++...+.. -+.+++++.||.|+.+| +++ .+.+.++ ....
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ 122 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGV 122 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCc
Confidence 45556667766653 45899999999988765543 45788889999998884 222 2222111 2234
Q ss_pred chHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc-cchhc--cccccccccccccc
Q 018008 118 DTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS-GLRVM--YPVKRTFWFDIYKN 193 (362)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~-~~~~~--~~~~~~~~~~~~~~ 193 (362)
+.+..+.+.+..+..++++|+.+|++.|.|-||.++..+++.+|+ +.++..++.... ..... .+...-.....-++
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 567789999999999999999999999999999999999999997 677766665541 11000 00000000000011
Q ss_pred cCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 194 IDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 194 ~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
.. +...-+.-|.+|..|..++.....+.+..++.
T Consensus 203 ~~--p~~gG~~~~g~g~~~~~v~~~~~~~~Waa~ng 236 (312)
T COG3509 203 LN--PYHGGGVPIGRGQRDGVVSAADLAARWAAVNG 236 (312)
T ss_pred CC--CCCCCCcccccccccccccHHHHHHHHHHhcC
Confidence 11 11111222788888888766666666666553
No 115
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.20 E-value=1.1e-10 Score=84.10 Aligned_cols=77 Identities=21% Similarity=0.302 Sum_probs=61.0
Q ss_pred CCEEEEEEEeCCCC-CeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHH
Q 018008 54 GNEIVAMYVKNPSA-SLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLE 131 (362)
Q Consensus 54 g~~l~~~~~~~~~~-~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~ 131 (362)
|.+|.+..+.++.+ +.+|+++||.+.....+..+...| .+.||.|+++|+||||.|.+.......++++.+++..+.
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L-~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFL-AEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHH-HhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 56777777777765 899999999999887666665555 788999999999999999987766667777766666554
No 116
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.19 E-value=6.5e-10 Score=94.47 Aligned_cols=190 Identities=19% Similarity=0.234 Sum_probs=109.3
Q ss_pred EEEEcCCCCEEEEEEEeCCC----CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCC-cCCCCCCCcc---c
Q 018008 47 LKLSTKKGNEIVAMYVKNPS----ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGY-GHSSGKPSEQ---D 118 (362)
Q Consensus 47 ~~i~~~~g~~l~~~~~~~~~----~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~s~~~~~~~---~ 118 (362)
.-+...+|..|..|...|.. ..++||+..|++.....+..+...+ ...||.|+-||...| |.|+|..... .
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL-~~NGFhViRyDsl~HvGlSsG~I~eftms~ 83 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYL-SANGFHVIRYDSLNHVGLSSGDINEFTMSI 83 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHH-HTTT--EEEE---B-------------HHH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHH-hhCCeEEEeccccccccCCCCChhhcchHH
Confidence 34566788999888876643 3489999999998766655555544 788999999998876 8888754332 2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhccc-------------cc--
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYP-------------VK-- 183 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~-------------~~-- 183 (362)
...++..+++|+. ..|+ .++.|+.-|+.|-+|+..++.- ++.-+|...++...-..+.. .+
T Consensus 84 g~~sL~~V~dwl~-~~g~--~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~d 159 (294)
T PF02273_consen 84 GKASLLTVIDWLA-TRGI--RRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPED 159 (294)
T ss_dssp HHHHHHHHHHHHH-HTT-----EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SE
T ss_pred hHHHHHHHHHHHH-hcCC--CcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCc
Confidence 3478889999988 5566 7899999999999999999854 68888887776642211100 00
Q ss_pred ------------------cccccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC-cceEEeCCCCc
Q 018008 184 ------------------RTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK-YEPLWLKGGNH 241 (362)
Q Consensus 184 ------------------~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~-~~~~~i~g~~h 241 (362)
...|.+.-....+++.+.+|++.+++.+|.+|......++...++.. ++++.++|..|
T Consensus 160 ldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~H 236 (294)
T PF02273_consen 160 LDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSH 236 (294)
T ss_dssp EEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS
T ss_pred ccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccc
Confidence 01122222345667778999999999999999999999988877753 56666777666
No 117
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.19 E-value=5.8e-10 Score=99.70 Aligned_cols=168 Identities=23% Similarity=0.384 Sum_probs=116.7
Q ss_pred CeeEEEEEcCCCCEEEEEEEeCC--CCCeEEEEeCCCcCChhch------HHHHHHHHHhcCeEEEEEccCCCcCCCCCC
Q 018008 43 DVDVLKLSTKKGNEIVAMYVKNP--SASLTVLYSHGNAADLGQM------CPIFTELSVHLNVSLMGYDYSGYGHSSGKP 114 (362)
Q Consensus 43 ~~~~~~i~~~~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~~~~------~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~ 114 (362)
.++.+.|.. |+..+.++.+..+ .+...||++-|+++..+.. ...+..++...+.+|+.++|||.|.|.|.+
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~ 189 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP 189 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC
Confidence 445666665 8888888877644 3567999999999877662 246777888899999999999999999988
Q ss_pred CccchHHHHHHHHHHHHHHh-CCCCCcEEEEEEccchHHHHHHHHhCC-----CccEEEEcC-Cccccchhcccccc---
Q 018008 115 SEQDTYADIEAAYKCLEETY-GVKEEDIILYGQSVGSGPTLELAVRLP-----RLRAVILHS-PILSGLRVMYPVKR--- 184 (362)
Q Consensus 115 ~~~~~~~d~~~~i~~l~~~~-~~~~~~i~l~GhS~Gg~ia~~~a~~~p-----~v~~~vl~~-p~~~~~~~~~~~~~--- 184 (362)
...+.+.|..+.++++.++. |++++.|++.|||+||.++..++.+.. .++-+++-+ .+.+.-........
T Consensus 190 s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~ 269 (365)
T PF05677_consen 190 SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFFGPIG 269 (365)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHHHHHHH
Confidence 87778899999999998754 667799999999999999998666543 144444432 33221111111000
Q ss_pred ccccc----cccccCCCCCCCCCEEEEEeCC
Q 018008 185 TFWFD----IYKNIDKIPLVECPVLVIHGTE 211 (362)
Q Consensus 185 ~~~~~----~~~~~~~~~~i~~P~lvi~G~~ 211 (362)
.+... ..+.......+.||-+++++.+
T Consensus 270 ~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 270 KLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred HHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 00000 1233444556789999999874
No 118
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.14 E-value=1.3e-10 Score=102.68 Aligned_cols=191 Identities=19% Similarity=0.242 Sum_probs=115.9
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcC----eEEEEEccCCC----cCCCC---CC------------CccchHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLN----VSLMGYDYSGY----GHSSG---KP------------SEQDTYADI 123 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g----~~vi~~D~~G~----G~s~~---~~------------~~~~~~~d~ 123 (362)
..-|.||+||++++...+..++..+-.+.| ..++.++--|+ |.-.. .| ........+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 456899999999998888888887742444 23445555553 22111 11 111233567
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC------CCccEEEEcCCccccchhccc-------------ccc
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL------PRLRAVILHSPILSGLRVMYP-------------VKR 184 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~------p~v~~~vl~~p~~~~~~~~~~-------------~~~ 184 (362)
..++.+|.++|++ +++-++||||||..++.++..+ |.+..+|.++..+.+...... ...
T Consensus 90 ~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 90 KKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 8899999999999 9999999999999999998874 458999999877765532211 001
Q ss_pred ccccccccc-cCCCCCCCCCEEEEEeC------CCCCCCchhHHHHHHHhccC---cceEEeCCCCcCccccCCCCCccc
Q 018008 185 TFWFDIYKN-IDKIPLVECPVLVIHGT------EDEVVDFSHGKQLWELCKDK---YEPLWLKGGNHCNLELYPENVSEQ 254 (362)
Q Consensus 185 ~~~~~~~~~-~~~~~~i~~P~lvi~G~------~D~~v~~~~~~~l~~~~~~~---~~~~~i~g~~h~~~~~~~~~~H~~ 254 (362)
..+.+.... ...++ -.+.+|-|.|. .|..||...++.+...++.. ++...+.|. ++.|.-
T Consensus 168 ~~y~~l~~~~~~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~---------~a~HS~ 237 (255)
T PF06028_consen 168 PMYQDLLKNRRKNFP-KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGK---------DAQHSQ 237 (255)
T ss_dssp HHHHHHHHTHGGGST-TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESG---------GGSCCG
T ss_pred HHHHHHHHHHHhhCC-CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECC---------CCcccc
Confidence 111222233 23333 46679999998 79999999998888888763 333444432 234555
Q ss_pred CCcchhhhcccccccc
Q 018008 255 GSDQQENQRNNTEQKT 270 (362)
Q Consensus 255 ~~e~~~~~~~~i~~fl 270 (362)
..|.++ +.+.|.+||
T Consensus 238 LheN~~-V~~~I~~FL 252 (255)
T PF06028_consen 238 LHENPQ-VDKLIIQFL 252 (255)
T ss_dssp GGCCHH-HHHHHHHHH
T ss_pred CCCCHH-HHHHHHHHh
Confidence 555543 446777766
No 119
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.14 E-value=7.6e-10 Score=96.44 Aligned_cols=160 Identities=19% Similarity=0.228 Sum_probs=106.3
Q ss_pred cCCCCEEEEEEEeCC-----CCC-eEEEEeCCCcCChhchHHHHH-------HHHHhcCeEEEEEccCC-CcCCCCCCCc
Q 018008 51 TKKGNEIVAMYVKNP-----SAS-LTVLYSHGNAADLGQMCPIFT-------ELSVHLNVSLMGYDYSG-YGHSSGKPSE 116 (362)
Q Consensus 51 ~~~g~~l~~~~~~~~-----~~~-p~vv~lHG~~~~~~~~~~~~~-------~l~~~~g~~vi~~D~~G-~G~s~~~~~~ 116 (362)
+..|+++.+.++.|. ... |.+||+||.|.....-+..+. ....+.+|-|+++.|.- +..+.. ..
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~--~t 245 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE--KT 245 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc--cc
Confidence 356788877666553 233 999999999876544433221 12233356666666432 111221 11
Q ss_pred cchHHHHHHHHH-HHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhcccccccccccccccc
Q 018008 117 QDTYADIEAAYK-CLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRTFWFDIYKNI 194 (362)
Q Consensus 117 ~~~~~d~~~~i~-~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~ 194 (362)
..........+. .+.+++++|.++|+++|.|+||+.++.++.+.|+ +.+.+++++--+.. ...
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v---------------~lv 310 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRV---------------YLV 310 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchh---------------hhh
Confidence 222333334444 7788999999999999999999999999999997 88888887543311 011
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 195 DKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 195 ~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
..+ -+.|+-++|+.+|.++|.+.++-+++.++.
T Consensus 311 ~~l--k~~piWvfhs~dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 311 RTL--KKAPIWVFHSSDDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred hhh--ccCceEEEEecCCCccccCcceeehHHHHh
Confidence 122 257999999999999999998877777664
No 120
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=4.4e-10 Score=101.73 Aligned_cols=194 Identities=20% Similarity=0.163 Sum_probs=129.8
Q ss_pred CCCeEEEEeCCCcCChhc----------hHHHH-HH--HHHhcCeEEEEEccCCCc-CCCCC----CC--------ccch
Q 018008 66 SASLTVLYSHGNAADLGQ----------MCPIF-TE--LSVHLNVSLMGYDYSGYG-HSSGK----PS--------EQDT 119 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~----------~~~~~-~~--l~~~~g~~vi~~D~~G~G-~s~~~----~~--------~~~~ 119 (362)
...++||++|+..++... |++.+ .. -..-..|.||+.|..|.. .|+++ +. ...+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 346799999999875321 33332 21 124456889999999865 34332 11 2346
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEE-EEEEccchHHHHHHHHhCCC-ccEEEEcCCccc-----------------------
Q 018008 120 YADIEAAYKCLEETYGVKEEDII-LYGQSVGSGPTLELAVRLPR-LRAVILHSPILS----------------------- 174 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~-l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~----------------------- 174 (362)
+.|+..+-..+++++|| +++. ++|-||||+.++.++..+|+ |+.+|.++....
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n 206 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWN 206 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 68888888999999999 7775 99999999999999999995 888777764211
Q ss_pred ------------cchhc-------cc----ccccccc-------------------------------------------
Q 018008 175 ------------GLRVM-------YP----VKRTFWF------------------------------------------- 188 (362)
Q Consensus 175 ------------~~~~~-------~~----~~~~~~~------------------------------------------- 188 (362)
++... +. +...+..
T Consensus 207 ~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~al 286 (368)
T COG2021 207 GGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRAL 286 (368)
T ss_pred CCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Confidence 00000 00 0000000
Q ss_pred cccccc-------CCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhh
Q 018008 189 DIYKNI-------DKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQEN 261 (362)
Q Consensus 189 ~~~~~~-------~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~ 261 (362)
+.++.. +.++.++.|+|++.-+.|..+|++..+++.+.++..... .++-...||-..+...+.
T Consensus 287 d~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~----------~~i~S~~GHDaFL~e~~~ 356 (368)
T COG2021 287 DYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGAL----------REIDSPYGHDAFLVESEA 356 (368)
T ss_pred HhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCce----------EEecCCCCchhhhcchhh
Confidence 011111 226678999999999999999999999999999874222 233445688877777777
Q ss_pred hccccccccc
Q 018008 262 QRNNTEQKTE 271 (362)
Q Consensus 262 ~~~~i~~fl~ 271 (362)
+...|..||+
T Consensus 357 ~~~~i~~fL~ 366 (368)
T COG2021 357 VGPLIRKFLA 366 (368)
T ss_pred hhHHHHHHhh
Confidence 7778888875
No 121
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.12 E-value=6.8e-10 Score=96.34 Aligned_cols=152 Identities=17% Similarity=0.191 Sum_probs=78.2
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHH---HhcCeEEEEEccCCCc-----CCC------------CC------CCc-cch
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELS---VHLNVSLMGYDYSGYG-----HSS------------GK------PSE-QDT 119 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~---~~~g~~vi~~D~~G~G-----~s~------------~~------~~~-~~~ 119 (362)
.++-||++||++.+...+..++..+. .+.++..+.+|-|--- ... .+ ... ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 46789999999999988876655543 2236777777755211 110 00 000 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh---------CCCccEEEEcCCccccchhcccccccccccc
Q 018008 120 YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR---------LPRLRAVILHSPILSGLRVMYPVKRTFWFDI 190 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~---------~p~v~~~vl~~p~~~~~~~~~~~~~~~~~~~ 190 (362)
+.++.+.++++.+...-.+.-..|+|+|.||.+|..++.. .|.++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 3445555555554332111346799999999999998863 2348999999987653211
Q ss_pred ccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC
Q 018008 191 YKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK 230 (362)
Q Consensus 191 ~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~ 230 (362)
+.....-..+++|+|.++|.+|.+++++.++.+.+.+.+.
T Consensus 151 ~~~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~ 190 (212)
T PF03959_consen 151 YQELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD 190 (212)
T ss_dssp GTTTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH
T ss_pred hhhhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC
Confidence 1111134457899999999999999999999999998864
No 122
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.10 E-value=6.1e-10 Score=111.65 Aligned_cols=111 Identities=17% Similarity=0.157 Sum_probs=74.0
Q ss_pred EEEcCCCCEEEEEEEe--------CCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCC------
Q 018008 48 KLSTKKGNEIVAMYVK--------NPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGK------ 113 (362)
Q Consensus 48 ~i~~~~g~~l~~~~~~--------~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~------ 113 (362)
.+.++++..+.+.... +....|+||++||++++...|..+...+ ...||.|+++|+||||.+...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~L-a~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTL-AAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHH-HhCCcEEEEeCCCCCCccccccccccc
Confidence 4556666555433321 1223479999999999998888777766 667999999999999999422
Q ss_pred ----CCc------------cchHHHHHHHHHHHHHHhC--------------CCCCcEEEEEEccchHHHHHHHHh
Q 018008 114 ----PSE------------QDTYADIEAAYKCLEETYG--------------VKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 114 ----~~~------------~~~~~d~~~~i~~l~~~~~--------------~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
... .+.+.+...++..+...++ ++..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 000 0123333333333333322 345799999999999999999875
No 123
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.07 E-value=5.7e-09 Score=93.61 Aligned_cols=107 Identities=23% Similarity=0.344 Sum_probs=79.1
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHh--cCeEEEEEccCCCcCCCCC-----CCccchHHH-HHHHHHHHHH---HhCC
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVH--LNVSLMGYDYSGYGHSSGK-----PSEQDTYAD-IEAAYKCLEE---TYGV 136 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~s~~~-----~~~~~~~~d-~~~~i~~l~~---~~~~ 136 (362)
+..||+++|+++-.+.|.+.+..+... ..+.|+++.+.||-.+... ....+.++| +...++.+.+ ....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 568999999999987777777777655 3799999999999776643 223344433 3333333333 3221
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCC----CccEEEEcCCccc
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLP----RLRAVILHSPILS 174 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p----~v~~~vl~~p~~~ 174 (362)
+..+++|+|||.|+++++.++.+.+ +|.+++++-|.+.
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 4478999999999999999999988 4999999988654
No 124
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.07 E-value=6.5e-09 Score=84.36 Aligned_cols=153 Identities=16% Similarity=0.170 Sum_probs=96.1
Q ss_pred eEEEEeCCCcCCh-hchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 018008 69 LTVLYSHGNAADL-GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 69 p~vv~lHG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
+.+|++||++++. ..|+..+..-+.. +-.+++. +...+ .++|+.+.+..-... -+++++|++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~----~w~~P----~~~dWi~~l~~~v~a---~~~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD----DWEAP----VLDDWIARLEKEVNA---AEGPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC----CCCCC----CHHHHHHHHHHHHhc---cCCCeEEEEec
Confidence 4689999988765 4455544433221 1123332 11112 234444333333332 23679999999
Q ss_pred cchHHHHHHHHhCC-CccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHH
Q 018008 148 VGSGPTLELAVRLP-RLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWEL 226 (362)
Q Consensus 148 ~Gg~ia~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~ 226 (362)
+|+..++.++.... .|.|+++++|.-.... .........+...... ...-|.+++...+|++++++.++.+.+.
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~~~~----~~~~~~~~tf~~~p~~-~lpfps~vvaSrnDp~~~~~~a~~~a~~ 142 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDVSRP----EIRPKHLMTFDPIPRE-PLPFPSVVVASRNDPYVSYEHAEDLANA 142 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCcccc----ccchhhccccCCCccc-cCCCceeEEEecCCCCCCHHHHHHHHHh
Confidence 99999999998765 5999999998764321 1111111222222222 2445899999999999999999999999
Q ss_pred hccCcceEEeCCCCcCc
Q 018008 227 CKDKYEPLWLKGGNHCN 243 (362)
Q Consensus 227 ~~~~~~~~~i~g~~h~~ 243 (362)
+.. .++....+||.+
T Consensus 143 wgs--~lv~~g~~GHiN 157 (181)
T COG3545 143 WGS--ALVDVGEGGHIN 157 (181)
T ss_pred ccH--hheecccccccc
Confidence 986 566667777754
No 125
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.05 E-value=2.4e-09 Score=93.47 Aligned_cols=150 Identities=21% Similarity=0.291 Sum_probs=90.3
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHH-------hcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHh---CC
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSV-------HLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETY---GV 136 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~-------~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~---~~ 136 (362)
.+.+|||+||.+++..++..+...... ...+.++++|+......-.........+.+.+.++.+++.+ ..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 467899999999988776665544421 12577889998764322111111223455667777777776 33
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCC----CccEEEEcCCccccchh--------ccccccccccccccccCCCCCCCCCE
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLP----RLRAVILHSPILSGLRV--------MYPVKRTFWFDIYKNIDKIPLVECPV 204 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p----~v~~~vl~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~P~ 204 (362)
++++++|+||||||.++-.++...+ .|+.+|.++....+... ++.....+|...+.....+. .+.+
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~~~~d~~~~~~y~~~~~~~~~~~~~~~~~~--~v~~ 160 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSPLAFDRSLDRFYKRLNNFWRKNYSPADSLR--DVTV 160 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCccccchHHHHHHHHHHHHHHHHhcccccccC--CceE
Confidence 5589999999999999888877544 38999998865543221 22222233433322222222 3344
Q ss_pred EEE-EeCCCCCCCch
Q 018008 205 LVI-HGTEDEVVDFS 218 (362)
Q Consensus 205 lvi-~G~~D~~v~~~ 218 (362)
+-+ -|..|..++.+
T Consensus 161 vSi~gG~~D~~v~~~ 175 (225)
T PF07819_consen 161 VSIAGGIRDTLVPSD 175 (225)
T ss_pred EEecCCccccccccc
Confidence 434 45678777665
No 126
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.04 E-value=1.6e-09 Score=101.79 Aligned_cols=162 Identities=20% Similarity=0.243 Sum_probs=84.4
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCC------CC-----C-------C--------C-ccc
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHS------SG-----K-------P--------S-EQD 118 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s------~~-----~-------~--------~-~~~ 118 (362)
+.-|+|||.||.+++...+..+..+| +.+||.|+++|.+..-.. .+ . . . ...
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eL-AS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGEL-ASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHH-HHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHH-HhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 45699999999999988888888888 677999999999853111 00 0 0 0 000
Q ss_pred -----------hHHHHHHHHHHHHHH------------------h--CCCCCcEEEEEEccchHHHHHHHHhCCCccEEE
Q 018008 119 -----------TYADIEAAYKCLEET------------------Y--GVKEEDIILYGQSVGSGPTLELAVRLPRLRAVI 167 (362)
Q Consensus 119 -----------~~~d~~~~i~~l~~~------------------~--~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~v 167 (362)
...|+..+++.|.+- + .+|.++|+++|||+||..++..+....++++.|
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I 256 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEE
Confidence 113455566555431 0 123468999999999999999999988999999
Q ss_pred EcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc--CcceEEeCCCCcCccc
Q 018008 168 LHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD--KYEPLWLKGGNHCNLE 245 (362)
Q Consensus 168 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~--~~~~~~i~g~~h~~~~ 245 (362)
+++|++-.+ .. +....++.|+|+|..+. +.-......+.+.... ....+++.|..|..+.
T Consensus 257 ~LD~W~~Pl------~~----------~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~s 318 (379)
T PF03403_consen 257 LLDPWMFPL------GD----------EIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFS 318 (379)
T ss_dssp EES---TTS-------G----------GGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGS
T ss_pred EeCCcccCC------Cc----------ccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcc
Confidence 999986322 11 01134578999998874 3323333333322222 2445667777775443
Q ss_pred c
Q 018008 246 L 246 (362)
Q Consensus 246 ~ 246 (362)
.
T Consensus 319 D 319 (379)
T PF03403_consen 319 D 319 (379)
T ss_dssp G
T ss_pred h
Confidence 3
No 127
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.04 E-value=1.4e-09 Score=91.48 Aligned_cols=178 Identities=19% Similarity=0.123 Sum_probs=106.5
Q ss_pred CCeEEEEeCCCcCChhchHHH---HHHHHHhcCeEEEEEccCC----CcCC--CC-----CCC---------------cc
Q 018008 67 ASLTVLYSHGNAADLGQMCPI---FTELSVHLNVSLMGYDYSG----YGHS--SG-----KPS---------------EQ 117 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~---~~~l~~~~g~~vi~~D~~G----~G~s--~~-----~~~---------------~~ 117 (362)
.++-||++||+-.+...+... +..++.+. +..+.+|.|- -+.+ .+ .+. ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 357899999999887666543 33333333 5556666662 0111 00 000 00
Q ss_pred chHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh---------CCCccEEEEcCCccccchhcccccccccc
Q 018008 118 DTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR---------LPRLRAVILHSPILSGLRVMYPVKRTFWF 188 (362)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~---------~p~v~~~vl~~p~~~~~~~~~~~~~~~~~ 188 (362)
..+.-..+.+++|.+...-++.--.|+|+|.|+.++..++.. .|.++-+|+++++...-
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~------------ 150 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS------------ 150 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc------------
Confidence 011123344444444322121334699999999999999882 23478999988875421
Q ss_pred ccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcchhhhcccccc
Q 018008 189 DIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTEQ 268 (362)
Q Consensus 189 ~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~ 268 (362)
..+........+++|+|.|.|+.|.+++...+..|++.+.+. ....++ .||...... .+.+.+.+
T Consensus 151 ~~~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a------------~vl~Hp-ggH~VP~~~--~~~~~i~~ 215 (230)
T KOG2551|consen 151 KKLDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA------------TVLEHP-GGHIVPNKA--KYKEKIAD 215 (230)
T ss_pred chhhhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC------------eEEecC-CCccCCCch--HHHHHHHH
Confidence 122333344568999999999999999999999999999873 222222 366654433 45566667
Q ss_pred cccC
Q 018008 269 KTEK 272 (362)
Q Consensus 269 fl~~ 272 (362)
|++.
T Consensus 216 fi~~ 219 (230)
T KOG2551|consen 216 FIQS 219 (230)
T ss_pred HHHH
Confidence 7653
No 128
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.02 E-value=2.7e-09 Score=89.11 Aligned_cols=170 Identities=18% Similarity=0.222 Sum_probs=110.7
Q ss_pred CeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCC-----------------CCCCccchHHHHHHHHHHH
Q 018008 68 SLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSS-----------------GKPSEQDTYADIEAAYKCL 130 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~-----------------~~~~~~~~~~d~~~~i~~l 130 (362)
..+||++||.+.+...|.+.+..+ .-.++.-+++..|-.-.+. ...............+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l-~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQL-PLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcC-CCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 458999999999988887776664 4445555666444221110 0000111222333444444
Q ss_pred HH---HhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEE
Q 018008 131 EE---TYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLV 206 (362)
Q Consensus 131 ~~---~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lv 206 (362)
.+ ..|++.++|++.|+|+||.+++..+..++. +.+++..+++........+....-+ + ..|++.
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~-----------~-~~~i~~ 149 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGV-----------N-YTPILL 149 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCcccc-----------C-cchhhe
Confidence 43 457788999999999999999999999984 8888888877653222111111101 0 679999
Q ss_pred EEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCCcc
Q 018008 207 IHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGSDQ 258 (362)
Q Consensus 207 i~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~e~ 258 (362)
.||+.|++||....+...+.+.... .-+.+..|++.+|....+.
T Consensus 150 ~Hg~~d~~vp~~~g~~s~~~l~~~~--------~~~~f~~y~g~~h~~~~~e 193 (206)
T KOG2112|consen 150 CHGTADPLVPFRFGEKSAQFLKSLG--------VRVTFKPYPGLGHSTSPQE 193 (206)
T ss_pred ecccCCceeehHHHHHHHHHHHHcC--------CceeeeecCCccccccHHH
Confidence 9999999999998888888776531 1256777888888765443
No 129
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.01 E-value=1.7e-09 Score=94.94 Aligned_cols=99 Identities=17% Similarity=0.255 Sum_probs=71.8
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHH-HHHHHHHHHhCCCCCcEEEEEEc
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIE-AAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~-~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
++|+++|+.+++...|..+...+..+ .+.|++++++|.+... ....+++++. ..++.+.+... ..++.|+|||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~-~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~~~--~gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDD-VIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRARQP--EGPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTT-EEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHHTS--SSSEEEEEET
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCC-eEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhhCC--CCCeeehccC
Confidence 47999999999888877777777444 5888999999987322 2234555544 44444544433 2599999999
Q ss_pred cchHHHHHHHHhCC----CccEEEEcCCcc
Q 018008 148 VGSGPTLELAVRLP----RLRAVILHSPIL 173 (362)
Q Consensus 148 ~Gg~ia~~~a~~~p----~v~~~vl~~p~~ 173 (362)
+||.+|+.+|.+.. .+..++++++..
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999998753 389999998543
No 130
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.97 E-value=2e-09 Score=93.39 Aligned_cols=122 Identities=26% Similarity=0.370 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhc---c------c-cc-------
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVM---Y------P-VK------- 183 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~---~------~-~~------- 183 (362)
+-+++++++|.++-.+++++|.|+|.|.||-+|+.+|...|.|+++|.++|..-..... . + ..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 45788999999998888889999999999999999999999999999999743211100 0 0 00
Q ss_pred --c------ccccc-ccc-ccC----CCCCCCCCEEEEEeCCCCCCCchh-HHHHHHHhccC-----cceEEeCCCCcC
Q 018008 184 --R------TFWFD-IYK-NID----KIPLVECPVLVIHGTEDEVVDFSH-GKQLWELCKDK-----YEPLWLKGGNHC 242 (362)
Q Consensus 184 --~------~~~~~-~~~-~~~----~~~~i~~P~lvi~G~~D~~v~~~~-~~~l~~~~~~~-----~~~~~i~g~~h~ 242 (362)
. .+.+. ... ..+ .+.++++|+|+|.|++|...|... ++.+.+.++.. .+.+.++++||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S-
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCce
Confidence 0 00000 000 011 234679999999999999988764 45555656543 455667777774
No 131
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.94 E-value=9.9e-09 Score=85.16 Aligned_cols=138 Identities=22% Similarity=0.332 Sum_probs=96.4
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEcc
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSV 148 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~ 148 (362)
..+||+-|-|+-. .+...+.+.+++.|+.|+.+|-+-|-.+. .+..+...|+.+.+....++.+. ++++|+|+|+
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~--rtP~~~a~Dl~~~i~~y~~~w~~--~~vvLiGYSF 77 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLRYFWSE--RTPEQTAADLARIIRHYRARWGR--KRVVLIGYSF 77 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHHHHhhh--CCHHHHHHHHHHHHHHHHHHhCC--ceEEEEeecC
Confidence 3577777766643 56666677678999999999977655443 23356678899999999888876 8999999999
Q ss_pred chHHHHHHHHhCC-----CccEEEEcCCccccchhccccccccccc------cccccCCCCCCC-CCEEEEEeCCCCC
Q 018008 149 GSGPTLELAVRLP-----RLRAVILHSPILSGLRVMYPVKRTFWFD------IYKNIDKIPLVE-CPVLVIHGTEDEV 214 (362)
Q Consensus 149 Gg~ia~~~a~~~p-----~v~~~vl~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~-~P~lvi~G~~D~~ 214 (362)
|+-+.-....+.| +|..++|++|-...-. .....-|+. .++....+.+++ .|++.|+|+++.-
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dF---eihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d 152 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPSTTADF---EIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDD 152 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCCcceE---EEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCC
Confidence 9999888888877 2999999998654221 111111211 123333444443 4899999988754
No 132
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=5.8e-09 Score=99.71 Aligned_cols=188 Identities=18% Similarity=0.147 Sum_probs=130.5
Q ss_pred CCCeeEEEEEcCCCCEEEEEEEeC-----CCCCeEEEEeCCCcCCh--hchHHHHHHHHHhcCeEEEEEccCCCcCCCC-
Q 018008 41 RDDVDVLKLSTKKGNEIVAMYVKN-----PSASLTVLYSHGNAADL--GQMCPIFTELSVHLNVSLMGYDYSGYGHSSG- 112 (362)
Q Consensus 41 ~~~~~~~~i~~~~g~~l~~~~~~~-----~~~~p~vv~lHG~~~~~--~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~- 112 (362)
...++.+.+++.||..+.+..+.. .+++|.+|+.||+.+-. ..|.....-+ .+.|+.....|.||-|+-..
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~l-ld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSL-LDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEE-EecceEEEEEeeccCcccccc
Confidence 457888899999999887654432 24789999998865422 1222222223 44799888899999765431
Q ss_pred ------CCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccccccc
Q 018008 113 ------KPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRT 185 (362)
Q Consensus 113 ------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~ 185 (362)
-....+.++|+.+..++|.+..-..++++.+.|.|.||.++..++.+.|+ +.++|+-.|+++.+..+.-....
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilp 596 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILP 596 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccc
Confidence 12225678999999999998755567899999999999999999999997 89999999999877654332222
Q ss_pred ccc------------------ccccccCCCCCCC--CCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 186 FWF------------------DIYKNIDKIPLVE--CPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 186 ~~~------------------~~~~~~~~~~~i~--~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
.|. ..+.+.+.+.... ..+|+..+.+|+-|.+.++..+.+.++.
T Consensus 597 lt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre 660 (712)
T KOG2237|consen 597 LTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLRE 660 (712)
T ss_pred cchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHH
Confidence 221 1223333332222 2488999999888888877777766654
No 133
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.90 E-value=5.7e-08 Score=91.10 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=69.0
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEcc
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSV 148 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~ 148 (362)
|+||++....+....+..-+.+.+.. |+.|+..||..-+.... ......++|....+...+++.|- ++.++|+|+
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~-~~~~f~ldDYi~~l~~~i~~~G~---~v~l~GvCq 177 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL-SAGKFDLEDYIDYLIEFIRFLGP---DIHVIAVCQ 177 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch-hcCCCCHHHHHHHHHHHHHHhCC---CCcEEEEch
Confidence 79999999887655555545555566 99999999986653320 01122345554555555666663 499999999
Q ss_pred chHHHHHHHHhC-----C-CccEEEEcCCccc
Q 018008 149 GSGPTLELAVRL-----P-RLRAVILHSPILS 174 (362)
Q Consensus 149 Gg~ia~~~a~~~-----p-~v~~~vl~~p~~~ 174 (362)
||.+++.+++.. | .++.++++.+.++
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID 209 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPID 209 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCcc
Confidence 999988776654 4 4999998876554
No 134
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.89 E-value=1.9e-08 Score=91.41 Aligned_cols=179 Identities=17% Similarity=0.122 Sum_probs=103.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCC--cCCCCCC------C---ccchHHHHHHHHHHHHHH--
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGY--GHSSGKP------S---EQDTYADIEAAYKCLEET-- 133 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~s~~~~------~---~~~~~~d~~~~i~~l~~~-- 133 (362)
..|+|++.||.|.....+.. +.+.++..||.|.++|.+|- |...... . ..+...|+...+.+|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~-~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAW-LAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhh-hHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 46999999999998666544 44555888999999999983 3332110 1 122336788888888776
Q ss_pred ---h--CCCCCcEEEEEEccchHHHHHHHHhCCCc---------cEEEEcCCccccchhccc-------cccccccc---
Q 018008 134 ---Y--GVKEEDIILYGQSVGSGPTLELAVRLPRL---------RAVILHSPILSGLRVMYP-------VKRTFWFD--- 189 (362)
Q Consensus 134 ---~--~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v---------~~~vl~~p~~~~~~~~~~-------~~~~~~~~--- 189 (362)
+ .++..+|.++|||+||+.++.++.-..+. .+.+...+.......+.. .....+.|
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpri 228 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRI 228 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhccccccc
Confidence 1 23568999999999999999987654321 111112111111111100 00000000
Q ss_pred ------------cccccCCCCCCCCCEEEEEeCCCCCCCchh-HHHHHHHhccC-cceEEeCCCCcCccccC
Q 018008 190 ------------IYKNIDKIPLVECPVLVIHGTEDEVVDFSH-GKQLWELCKDK-YEPLWLKGGNHCNLELY 247 (362)
Q Consensus 190 ------------~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~-~~~l~~~~~~~-~~~~~i~g~~h~~~~~~ 247 (362)
.|. -..+.+++.|++++.|..|.+.|+.. .......+++. +-...++|+.|..+...
T Consensus 229 ravvA~~p~~~~~Fg-~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~ 299 (365)
T COG4188 229 RAVVAINPALGMIFG-TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLEL 299 (365)
T ss_pred eeeeeccCCcccccc-cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCcccccccc
Confidence 111 34566789999999999999777642 33444444443 22334455555444433
No 135
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.85 E-value=1.6e-07 Score=86.52 Aligned_cols=106 Identities=26% Similarity=0.329 Sum_probs=74.5
Q ss_pred CCeEEEEeCCCcCChhchHHHH------HHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCc
Q 018008 67 ASLTVLYSHGNAADLGQMCPIF------TELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEED 140 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~------~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 140 (362)
+.|+|||+||+|........++ ..++. ...++++||.-..-.......+..+.++.+.+++|.+..|. +.
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~--~n 196 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGN--KN 196 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCC--Ce
Confidence 5699999999986443332222 22323 45788899875431111223345678899999999977665 89
Q ss_pred EEEEEEccchHHHHHHHHhCC------CccEEEEcCCccccc
Q 018008 141 IILYGQSVGSGPTLELAVRLP------RLRAVILHSPILSGL 176 (362)
Q Consensus 141 i~l~GhS~Gg~ia~~~a~~~p------~v~~~vl~~p~~~~~ 176 (362)
|+|+|-|+||.+++.++.... -.+++|+++|++...
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999998876422 268999999998643
No 136
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.84 E-value=8.2e-08 Score=92.73 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=77.4
Q ss_pred CCEEEEEEEeC---CCCCeEEEEeCCCcCChhchHHHHHH-----------------HHHhcCeEEEEEccC-CCcCCCC
Q 018008 54 GNEIVAMYVKN---PSASLTVLYSHGNAADLGQMCPIFTE-----------------LSVHLNVSLMGYDYS-GYGHSSG 112 (362)
Q Consensus 54 g~~l~~~~~~~---~~~~p~vv~lHG~~~~~~~~~~~~~~-----------------l~~~~g~~vi~~D~~-G~G~s~~ 112 (362)
+..+..|++.. +...|+||+++|+++++..+ ..+.+ ..-..-.+++.+|.| |+|.|..
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYA 138 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccC
Confidence 56778888774 34679999999998876432 22111 011123567889975 8888864
Q ss_pred CCCc-----cchHHHHHHHHHHHHHHhC-CCCCcEEEEEEccchHHHHHHHHhC---------C--CccEEEEcCCccc
Q 018008 113 KPSE-----QDTYADIEAAYKCLEETYG-VKEEDIILYGQSVGSGPTLELAVRL---------P--RLRAVILHSPILS 174 (362)
Q Consensus 113 ~~~~-----~~~~~d~~~~i~~l~~~~~-~~~~~i~l~GhS~Gg~ia~~~a~~~---------p--~v~~~vl~~p~~~ 174 (362)
.... ....+|+.+.+..+.+++. ....+++|+|||+||..+..+|... . +++|+++.+|+++
T Consensus 139 ~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 139 DKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 3211 2233556666665555442 2347999999999999998877642 1 3789999887553
No 137
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.83 E-value=1.1e-07 Score=91.68 Aligned_cols=132 Identities=14% Similarity=0.101 Sum_probs=99.5
Q ss_pred CCeeEEEEEcCCCCEEEEEEEeCC--CCCeEEEEeC--CCcCC---hhchHHHHHH--HHHhcCeEEEEEccCCCcCCCC
Q 018008 42 DDVDVLKLSTKKGNEIVAMYVKNP--SASLTVLYSH--GNAAD---LGQMCPIFTE--LSVHLNVSLMGYDYSGYGHSSG 112 (362)
Q Consensus 42 ~~~~~~~i~~~~g~~l~~~~~~~~--~~~p~vv~lH--G~~~~---~~~~~~~~~~--l~~~~g~~vi~~D~~G~G~s~~ 112 (362)
.-..++.++..||.+|..-.|.++ ++.|+++..+ ..... .........+ .+...||.||..|.||.|.|.|
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG 96 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCc
Confidence 345678899999999998776666 5678999888 33332 1111222221 4577899999999999999998
Q ss_pred CCCccc--hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCCccc
Q 018008 113 KPSEQD--TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSPILS 174 (362)
Q Consensus 113 ~~~~~~--~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p~~~ 174 (362)
...... ..+|-.+.|+++.++ .+.+.+|..+|.|++|+..+.+|+..| .+++++...+..+
T Consensus 97 ~~~~~~~~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 97 VFDPESSREAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccceeccccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 654333 467888999999885 345689999999999999999998877 5999998877554
No 138
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.83 E-value=3.5e-08 Score=94.06 Aligned_cols=189 Identities=17% Similarity=0.174 Sum_probs=135.7
Q ss_pred CCCeeEEEEEcCCCCEEEEEEEe-C--CCCCeEEEEeCCCcCCh--hchHHHHHHHHHhcCeEEEEEccCCCcCCCC---
Q 018008 41 RDDVDVLKLSTKKGNEIVAMYVK-N--PSASLTVLYSHGNAADL--GQMCPIFTELSVHLNVSLMGYDYSGYGHSSG--- 112 (362)
Q Consensus 41 ~~~~~~~~i~~~~g~~l~~~~~~-~--~~~~p~vv~lHG~~~~~--~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~--- 112 (362)
...+++....+.||.+|.+..+. . .++.|++|+-.|+..-+ -.|...+ .+..+.|-.-+..+.||-|+-.+
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~-~~WLerGg~~v~ANIRGGGEfGp~WH 469 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSR-KLWLERGGVFVLANIRGGGEFGPEWH 469 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhh-HHHHhcCCeEEEEecccCCccCHHHH
Confidence 56678888889999999987764 2 23678888888765432 2344555 44456676667889999776432
Q ss_pred ----CCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhcccccccc-
Q 018008 113 ----KPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRTF- 186 (362)
Q Consensus 113 ----~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~- 186 (362)
.......++|+.++.+.|.++---.++++.+.|-|-||.++-.+..+.|+ +.++|+-.|+++.++-..-.....
T Consensus 470 ~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW 549 (648)
T COG1505 470 QAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSW 549 (648)
T ss_pred HHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhh
Confidence 12235577999999999998744467899999999999999988889997 888888889888664321111122
Q ss_pred --------------ccccccccCCCCC--CCCCEEEEEeCCCCCCCchhHHHHHHHhccC
Q 018008 187 --------------WFDIYKNIDKIPL--VECPVLVIHGTEDEVVDFSHGKQLWELCKDK 230 (362)
Q Consensus 187 --------------~~~~~~~~~~~~~--i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~ 230 (362)
+...|++...++. .=.|+||-.+..|.-|.|.|++.++..++..
T Consensus 550 ~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~ 609 (648)
T COG1505 550 IAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEV 609 (648)
T ss_pred HhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhc
Confidence 2233444444432 2348999999999999999999999999874
No 139
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.83 E-value=1.2e-07 Score=85.94 Aligned_cols=173 Identities=17% Similarity=0.135 Sum_probs=109.3
Q ss_pred CCeEEEEeCCCcCChhchH--HH-HHHHHHhcCeEEEEEccCCCcCCCCCCCc--------------cchHHHHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMC--PI-FTELSVHLNVSLMGYDYSGYGHSSGKPSE--------------QDTYADIEAAYKC 129 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~--~~-~~~l~~~~g~~vi~~D~~G~G~s~~~~~~--------------~~~~~d~~~~i~~ 129 (362)
.+|++|.+.|-|... .|+ .+ ...| .+.|+..+.+..|-||...+..+. ...+.+....+.|
T Consensus 91 ~rp~~IhLagTGDh~-f~rR~~l~a~pL-l~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHG-FWRRRRLMARPL-LKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCceEEEecCCCccc-hhhhhhhhhhHH-HHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 578999999988754 333 23 3445 445999999999999987643322 1123566777888
Q ss_pred HHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCcc------ccc-------hhcccc-------------
Q 018008 130 LEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPIL------SGL-------RVMYPV------------- 182 (362)
Q Consensus 130 l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~------~~~-------~~~~~~------------- 182 (362)
+.++ |. .++.+.|.||||.+|...++..|. +..+-.+++.. ++. ..+...
T Consensus 169 l~~~-G~--~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~ 245 (348)
T PF09752_consen 169 LERE-GY--GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDI 245 (348)
T ss_pred HHhc-CC--CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhccc
Confidence 8777 76 799999999999999999999996 44444443321 110 000000
Q ss_pred cccccc--------------------ccccccCCCCCC-----CCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeC
Q 018008 183 KRTFWF--------------------DIYKNIDKIPLV-----ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLK 237 (362)
Q Consensus 183 ~~~~~~--------------------~~~~~~~~~~~i-----~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~ 237 (362)
....+. ..+.....+.+. .-.+.++.+++|.+||......+.+.+++ +++.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPG-sEvR~l~ 324 (348)
T PF09752_consen 246 PAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPG-SEVRYLP 324 (348)
T ss_pred ccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCC-CeEEEec
Confidence 000000 000111122222 23478999999999999888888888876 5676776
Q ss_pred CCCcCcccc
Q 018008 238 GGNHCNLEL 246 (362)
Q Consensus 238 g~~h~~~~~ 246 (362)
| ||+....
T Consensus 325 g-GHVsA~L 332 (348)
T PF09752_consen 325 G-GHVSAYL 332 (348)
T ss_pred C-CcEEEee
Confidence 6 5754443
No 140
>PRK04940 hypothetical protein; Provisional
Probab=98.81 E-value=6.3e-08 Score=80.20 Aligned_cols=97 Identities=21% Similarity=0.223 Sum_probs=62.9
Q ss_pred CcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccccchhccccc---cccccccc-cccCCCC-CCCCCEEEEEeCCCC
Q 018008 139 EDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILSGLRVMYPVK---RTFWFDIY-KNIDKIP-LVECPVLVIHGTEDE 213 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~---~~~~~~~~-~~~~~~~-~i~~P~lvi~G~~D~ 213 (362)
+++.|+|.|+||+.|..++.++. + ..|+++|.+.....+.... ..+. +.- ..++.+. ...-..+++..+.|+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~~~~y~-~~~~~h~~eL~~~~p~r~~vllq~gDE 136 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDRPEEYA-DIATKCVTNFREKNRDRCLVILSRNDE 136 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCCCcchh-hhhHHHHHHhhhcCcccEEEEEeCCCc
Confidence 57999999999999999999985 4 5677888876544332211 1111 100 1112222 112236999999999
Q ss_pred CCCchhHHHHHHHhccCcceEEeCCCCc
Q 018008 214 VVDFSHGKQLWELCKDKYEPLWLKGGNH 241 (362)
Q Consensus 214 ~v~~~~~~~l~~~~~~~~~~~~i~g~~h 241 (362)
+.++..+.+.+..+ ....+.+|++|
T Consensus 137 vLDyr~a~~~y~~~---y~~~v~~GGdH 161 (180)
T PRK04940 137 VLDSQRTAEELHPY---YEIVWDEEQTH 161 (180)
T ss_pred ccCHHHHHHHhccC---ceEEEECCCCC
Confidence 99998886666443 24667777777
No 141
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.74 E-value=2.1e-07 Score=89.89 Aligned_cols=189 Identities=16% Similarity=0.173 Sum_probs=127.8
Q ss_pred CCCCeeEEEEEcCCCCEEEEEE-Ee----CCCCCeEEEEeCCCcCCh-h-chHHHHHHHHHhcCeEEEEEccCCCcCCCC
Q 018008 40 QRDDVDVLKLSTKKGNEIVAMY-VK----NPSASLTVLYSHGNAADL-G-QMCPIFTELSVHLNVSLMGYDYSGYGHSSG 112 (362)
Q Consensus 40 ~~~~~~~~~i~~~~g~~l~~~~-~~----~~~~~p~vv~lHG~~~~~-~-~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~ 112 (362)
..+..+.+..+..+|.++..-. +. -+++.|++|+.-|.-+.. . .|....-.| .+.|+.-...--||-|+-..
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSL-lDRGfiyAIAHVRGGgelG~ 493 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSL-LDRGFVYAIAHVRGGGELGR 493 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeee-ecCceEEEEEEeecccccCh
Confidence 3455666677778998776432 22 235778999988854432 2 222222233 56798665667788665431
Q ss_pred -------CCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccc---
Q 018008 113 -------KPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYP--- 181 (362)
Q Consensus 113 -------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~--- 181 (362)
.....+++.|+.++.++|.++--.+.+.++++|-|+||+++...+...|+ ++++|+..|+++.+..|..
T Consensus 494 ~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~sl 573 (682)
T COG1770 494 AWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSL 573 (682)
T ss_pred HHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCC
Confidence 23335678999999999998754566899999999999999999999997 9999999999987665532
Q ss_pred -cccccc--------------cccccccCCCCC-CCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 182 -VKRTFW--------------FDIYKNIDKIPL-VECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 182 -~~~~~~--------------~~~~~~~~~~~~-i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
+...-| ...|++.+.+.. .-.|+|++.|..|+.|..-.-.++..++..
T Consensus 574 PLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~ 637 (682)
T COG1770 574 PLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRE 637 (682)
T ss_pred CCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhh
Confidence 222222 122333333332 235799999999999998777777766654
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.74 E-value=2.7e-08 Score=91.66 Aligned_cols=110 Identities=17% Similarity=0.165 Sum_probs=69.5
Q ss_pred CCCeEEEEeCCCcCCh--hchHH-HHHHHHHh--cCeEEEEEccCCCcCCCCCCCccchH----HHHHHHHHHHHHHhCC
Q 018008 66 SASLTVLYSHGNAADL--GQMCP-IFTELSVH--LNVSLMGYDYSGYGHSSGKPSEQDTY----ADIEAAYKCLEETYGV 136 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~--~~~~~-~~~~l~~~--~g~~vi~~D~~G~G~s~~~~~~~~~~----~d~~~~i~~l~~~~~~ 136 (362)
..+|++|++|||..+. ..|.. ....++.. .+++||++||....... ........ ..+...+..|.+..++
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 3689999999998876 34544 44446565 58999999997432211 00000011 3456667777767788
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCCC---ccEEEEcCCccccc
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLPR---LRAVILHSPILSGL 176 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p~---v~~~vl~~p~~~~~ 176 (362)
+.++++|+|||+||++|-.++..... |..+..++|.-...
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 88999999999999999999887664 89999999876543
No 143
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.73 E-value=1e-07 Score=87.65 Aligned_cols=177 Identities=13% Similarity=0.165 Sum_probs=120.8
Q ss_pred CeEEEEeCCCcCChhch----HHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchH-HHHHHHHHHHHHHhCCCCCcEE
Q 018008 68 SLTVLYSHGNAADLGQM----CPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTY-ADIEAAYKCLEETYGVKEEDII 142 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~~----~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~~i~ 142 (362)
++++|++|.+-...-.+ ..-+..++.+.|..|+.+++++-..+.......+.+ +.+..+++.+.+..+. ++|.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~--~~In 184 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQ--KDIN 184 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCc--cccc
Confidence 56899999986532111 234555667889999999999766665443333333 7888999999999887 8999
Q ss_pred EEEEccchHHHHHHHHhCC-C-ccEEEEcCCccccch------------------------------------hccc---
Q 018008 143 LYGQSVGSGPTLELAVRLP-R-LRAVILHSPILSGLR------------------------------------VMYP--- 181 (362)
Q Consensus 143 l~GhS~Gg~ia~~~a~~~p-~-v~~~vl~~p~~~~~~------------------------------------~~~~--- 181 (362)
++|+|.||.++..+++..+ + |+.++++...++-.. .+.+
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndl 264 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDL 264 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCcccc
Confidence 9999999999999988887 4 888887764332100 0000
Q ss_pred -----------------cccccccc----------------cc-------------cccCCCCCCCCCEEEEEeCCCCCC
Q 018008 182 -----------------VKRTFWFD----------------IY-------------KNIDKIPLVECPVLVIHGTEDEVV 215 (362)
Q Consensus 182 -----------------~~~~~~~~----------------~~-------------~~~~~~~~i~~P~lvi~G~~D~~v 215 (362)
....+|.. .| ...=++..++||++++.|+.|.++
T Consensus 265 iw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~ 344 (445)
T COG3243 265 IWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIA 344 (445)
T ss_pred chHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccC
Confidence 00001100 00 012255678999999999999999
Q ss_pred CchhHHHHHHHhccCcceEEeCCCCcCccccC
Q 018008 216 DFSHGKQLWELCKDKYEPLWLKGGNHCNLELY 247 (362)
Q Consensus 216 ~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~ 247 (362)
|++........+++.++.+. -+.||...++-
T Consensus 345 P~~Sv~~g~~l~~g~~~f~l-~~sGHIa~vVN 375 (445)
T COG3243 345 PWSSVYLGARLLGGEVTFVL-SRSGHIAGVVN 375 (445)
T ss_pred CHHHHHHHHHhcCCceEEEE-ecCceEEEEeC
Confidence 99999998888888444444 44568766654
No 144
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.72 E-value=1.3e-06 Score=83.25 Aligned_cols=182 Identities=12% Similarity=0.128 Sum_probs=100.8
Q ss_pred eEEEEEcC-CCCEEEEEEEeCC----CCCeEEEEeCCCcCC-hhchHHHHHHHHHhcC----eEEEEEccCCCc-CCCCC
Q 018008 45 DVLKLSTK-KGNEIVAMYVKNP----SASLTVLYSHGNAAD-LGQMCPIFTELSVHLN----VSLMGYDYSGYG-HSSGK 113 (362)
Q Consensus 45 ~~~~i~~~-~g~~l~~~~~~~~----~~~p~vv~lHG~~~~-~~~~~~~~~~l~~~~g----~~vi~~D~~G~G-~s~~~ 113 (362)
+.+.+.+. -|.....+.|.++ ...|+|+++||.... .......+..+. ..| ..++.+|..+.. .+...
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li-~~g~i~P~ivV~id~~~~~~R~~el 259 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLT-HRGQLPPAVYLLIDAIDTTHRSQEL 259 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHH-HcCCCCceEEEEECCCCcccccccC
Confidence 44445443 2444444444443 346899999996522 122344555553 334 345677753211 11111
Q ss_pred CCccchHHHH-HHHHHHHHHHhCC--CCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhccccccccccc
Q 018008 114 PSEQDTYADI-EAAYKCLEETYGV--KEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPVKRTFWFD 189 (362)
Q Consensus 114 ~~~~~~~~d~-~~~i~~l~~~~~~--~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~ 189 (362)
.......+.+ .+++.++.+++.+ ++++.+|+|+||||..++.++.++|+ +.+++.+||.+--... .......+.+
T Consensus 260 ~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~-~~~~~~~l~~ 338 (411)
T PRK10439 260 PCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHR-GGQQEGVLLE 338 (411)
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCc-cCCchhHHHH
Confidence 1111222333 4566777777665 55789999999999999999999996 8999999986421000 0000111111
Q ss_pred cccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC
Q 018008 190 IYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK 230 (362)
Q Consensus 190 ~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~ 230 (362)
.+.. .........+++-+|+.|..+ .+..+++.+.+...
T Consensus 339 ~l~~-~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~ 377 (411)
T PRK10439 339 QLKA-GEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPA 377 (411)
T ss_pred HHHh-cccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHC
Confidence 1111 111122345788889988554 46678888888763
No 145
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.68 E-value=5e-07 Score=77.50 Aligned_cols=191 Identities=17% Similarity=0.206 Sum_probs=114.0
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcC----eEEEEEccCCC----cCCC--------------CCCCccchHHHHHHH
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLN----VSLMGYDYSGY----GHSS--------------GKPSEQDTYADIEAA 126 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g----~~vi~~D~~G~----G~s~--------------~~~~~~~~~~d~~~~ 126 (362)
=+.||+||.+++...+..++.++..+.. --++.+|--|- |.-+ ...........+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 3789999999999888888888865541 23556666551 1111 011112234567888
Q ss_pred HHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC------CCccEEEEcCCccc-cchhcccc-----------cccccc
Q 018008 127 YKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL------PRLRAVILHSPILS-GLRVMYPV-----------KRTFWF 188 (362)
Q Consensus 127 i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~------p~v~~~vl~~p~~~-~~~~~~~~-----------~~~~~~ 188 (362)
+.+|.++|++ ..+-++||||||.-...++..+ |.+..+|.++..+. +.-....- ....+.
T Consensus 126 msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~ 203 (288)
T COG4814 126 MSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYY 203 (288)
T ss_pred HHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHH
Confidence 8999999999 8999999999999999998865 45888888876554 11111000 111111
Q ss_pred ccccccCCCCCCCCCEEEEEeCC------CCCCCchhHHHHHHHhccCcce---EEeCCCCcCccccCCCCCcccCCcch
Q 018008 189 DIYKNIDKIPLVECPVLVIHGTE------DEVVDFSHGKQLWELCKDKYEP---LWLKGGNHCNLELYPENVSEQGSDQQ 259 (362)
Q Consensus 189 ~~~~~~~~~~~i~~P~lvi~G~~------D~~v~~~~~~~l~~~~~~~~~~---~~i~g~~h~~~~~~~~~~H~~~~e~~ 259 (362)
+.+..-...-.-.+-+|+|.|+- |..||...+..++..+..+-+. ..++| +++.|..+.|.+
T Consensus 204 ~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~G---------k~a~Hs~lhen~ 274 (288)
T COG4814 204 DYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKG---------KDARHSKLHENP 274 (288)
T ss_pred HHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeC---------CcchhhccCCCh
Confidence 11111111112356799999985 4567777777777777654211 12222 234555555554
Q ss_pred hhhccccccccc
Q 018008 260 ENQRNNTEQKTE 271 (362)
Q Consensus 260 ~~~~~~i~~fl~ 271 (362)
. .+..+..||-
T Consensus 275 ~-v~~yv~~FLw 285 (288)
T COG4814 275 T-VAKYVKNFLW 285 (288)
T ss_pred h-HHHHHHHHhh
Confidence 3 3355666663
No 146
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.66 E-value=3.8e-07 Score=80.39 Aligned_cols=163 Identities=16% Similarity=0.180 Sum_probs=100.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCC-----C----CCc---------------------
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSG-----K----PSE--------------------- 116 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~-----~----~~~--------------------- 116 (362)
.-|+|||.||.|++...|...-..+ +.+||.|.++..|-+..+.. . +..
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~L-AShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSL-ASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhH-hhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 4599999999999876666666666 78899999999986543210 0 000
Q ss_pred --cchHHHHHHHHHHHHHH---------------------hCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCcc
Q 018008 117 --QDTYADIEAAYKCLEET---------------------YGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPIL 173 (362)
Q Consensus 117 --~~~~~d~~~~i~~l~~~---------------------~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~ 173 (362)
....++...+++-|.+- -+++..+++++|||.||..++...+.+.+++..|+.+.++
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeeee
Confidence 00112344444444331 1234468899999999999998888878899999888764
Q ss_pred ccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccC--cceEEeCCCCcCccccCC
Q 018008 174 SGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDK--YEPLWLKGGNHCNLELYP 248 (362)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~--~~~~~i~g~~h~~~~~~~ 248 (362)
- |... ...++.+-|+++|.-++ +--.+...-+.+-+..+ ..++++.|.-|..+..+|
T Consensus 276 ~------Pl~~----------~~~~~arqP~~finv~~--fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfp 334 (399)
T KOG3847|consen 276 F------PLDQ----------LQYSQARQPTLFINVED--FQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFP 334 (399)
T ss_pred c------ccch----------hhhhhccCCeEEEEccc--ccchhHHHHHHhhhCCCccceEEEEccceecccccCc
Confidence 2 1111 23445677999998432 32234333333333333 345566777675554444
No 147
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.64 E-value=3.6e-07 Score=80.26 Aligned_cols=137 Identities=16% Similarity=0.224 Sum_probs=90.2
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCe--EEEEEccCCCcCCCCCCCcc----chHHHHHHHHHHHHHHhCCCCC
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNV--SLMGYDYSGYGHSSGKPSEQ----DTYADIEAAYKCLEETYGVKEE 139 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~--~vi~~D~~G~G~s~~~~~~~----~~~~d~~~~i~~l~~~~~~~~~ 139 (362)
..+.++||+||+..+...-...+.++....++ .++.+.||..|.-.+..... .....+.+.+..|.+..+. .
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~--~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI--K 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC--c
Confidence 46789999999999876655566666555554 68999999877533221111 1224556666666655444 8
Q ss_pred cEEEEEEccchHHHHHHHHhC------C----CccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEe
Q 018008 140 DIILYGQSVGSGPTLELAVRL------P----RLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHG 209 (362)
Q Consensus 140 ~i~l~GhS~Gg~ia~~~a~~~------p----~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G 209 (362)
+|.|++||||+.+.+.+.... | .+..+|+++|-++.-. +..... .+.....++.+.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~---------f~~~~~---~~~~~~~~itvy~s 161 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV---------FRSQLP---DLGSSARRITVYYS 161 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH---------HHHHHH---HHhhcCCCEEEEEc
Confidence 999999999999999876541 1 3789999998765311 101111 23334468999999
Q ss_pred CCCCCCC
Q 018008 210 TEDEVVD 216 (362)
Q Consensus 210 ~~D~~v~ 216 (362)
.+|....
T Consensus 162 ~~D~AL~ 168 (233)
T PF05990_consen 162 RNDRALK 168 (233)
T ss_pred CCchHHH
Confidence 9997644
No 148
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=1.3e-06 Score=74.73 Aligned_cols=109 Identities=16% Similarity=0.248 Sum_probs=74.0
Q ss_pred CCCCCeEEEEeCCCcCChhchHHHHHHHHHhcC--eEEEEEccCCCcCCC---CC---CC--ccchH-HHHHHHHHHHHH
Q 018008 64 NPSASLTVLYSHGNAADLGQMCPIFTELSVHLN--VSLMGYDYSGYGHSS---GK---PS--EQDTY-ADIEAAYKCLEE 132 (362)
Q Consensus 64 ~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~s~---~~---~~--~~~~~-~d~~~~i~~l~~ 132 (362)
....++.|+++.|+++..+.|.+....+....+ ..++.+-.-||-.-. .. .. +...+ +++..-+..+.+
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 346789999999999998877777777755554 446777666665432 11 11 12233 345556666666
Q ss_pred HhCCCCCcEEEEEEccchHHHHHHHHhCC---CccEEEEcCCcc
Q 018008 133 TYGVKEEDIILYGQSVGSGPTLELAVRLP---RLRAVILHSPIL 173 (362)
Q Consensus 133 ~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p---~v~~~vl~~p~~ 173 (362)
... .+.+++++|||.|+++.+.+.-... .|..++++-|-+
T Consensus 105 ~~P-k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 105 YVP-KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred hCC-CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 554 5589999999999999999887432 378888877644
No 149
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.57 E-value=2.9e-07 Score=82.94 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=92.9
Q ss_pred CCCEEEEEEEeCCC-----CCeEEEEeCCCcCChhchHHHHHHHHHhc--------CeEEEEEccCCCcCCCCCCCccch
Q 018008 53 KGNEIVAMYVKNPS-----ASLTVLYSHGNAADLGQMCPIFTELSVHL--------NVSLMGYDYSGYGHSSGKPSEQDT 119 (362)
Q Consensus 53 ~g~~l~~~~~~~~~-----~~p~vv~lHG~~~~~~~~~~~~~~l~~~~--------g~~vi~~D~~G~G~s~~~~~~~~~ 119 (362)
.|.+++.+...++. ..-++|++|||.++...++..+.-|.... -|.||++.+||+|.|++.......
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn 211 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFN 211 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCcc
Confidence 67788877766552 22489999999999999999888774432 378999999999999976555556
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEE
Q 018008 120 YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVIL 168 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl 168 (362)
....+.++..|+-++|. ++..+-|-.||+.|+..+|..+|+ |.|+=+
T Consensus 212 ~~a~ArvmrkLMlRLg~--nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 212 AAATARVMRKLMLRLGY--NKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred HHHHHHHHHHHHHHhCc--ceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 67788888899989998 899999999999999999999994 766544
No 150
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.50 E-value=8e-06 Score=75.66 Aligned_cols=225 Identities=16% Similarity=0.168 Sum_probs=137.2
Q ss_pred EEEcCCCCEEEEEE-EeC-CCCCeEEEEeCCCcCChh-chHHHH-HHHHHhcCeEEEEEccCCCcCCCCC---C------
Q 018008 48 KLSTKKGNEIVAMY-VKN-PSASLTVLYSHGNAADLG-QMCPIF-TELSVHLNVSLMGYDYSGYGHSSGK---P------ 114 (362)
Q Consensus 48 ~i~~~~g~~l~~~~-~~~-~~~~p~vv~lHG~~~~~~-~~~~~~-~~l~~~~g~~vi~~D~~G~G~s~~~---~------ 114 (362)
++.-.+..++.... +.+ ...+..|+++.|+|++.. .++..+ ..++...++.|+.++|-+.|....- .
T Consensus 13 ELgikR~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D 92 (403)
T PF11144_consen 13 ELGIKRESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDID 92 (403)
T ss_pred eecccccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHH
Confidence 33334444554433 222 235678999999999875 344444 4456667888899999887743210 0
Q ss_pred -------------------C--c------------------------------------cch--------HHHHHHHHHH
Q 018008 115 -------------------S--E------------------------------------QDT--------YADIEAAYKC 129 (362)
Q Consensus 115 -------------------~--~------------------------------------~~~--------~~d~~~~i~~ 129 (362)
. . .+. ..|+..++.+
T Consensus 93 ~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~ 172 (403)
T PF11144_consen 93 KEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLD 172 (403)
T ss_pred HHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHH
Confidence 0 0 000 0155666667
Q ss_pred HHHHhCCCC--CcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhc-------------------------cc
Q 018008 130 LEETYGVKE--EDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVM-------------------------YP 181 (362)
Q Consensus 130 l~~~~~~~~--~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~-------------------------~~ 181 (362)
+.+.+.-.. -+++++|+|.||+++...|.-.|. +++++=.+.+......+ .-
T Consensus 173 l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~~~~~~~i~~ 252 (403)
T PF11144_consen 173 LKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFFNFKNIRIYC 252 (403)
T ss_pred HHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccccccCCEEEEE
Confidence 766654333 399999999999999999999996 88887766544321100 00
Q ss_pred ccccccccc------ccc----------cCCC---C--CCCCCEEEEEeCCCCCCCchhHHHHHHHhcc---CcceEEeC
Q 018008 182 VKRTFWFDI------YKN----------IDKI---P--LVECPVLVIHGTEDEVVDFSHGKQLWELCKD---KYEPLWLK 237 (362)
Q Consensus 182 ~~~~~~~~~------~~~----------~~~~---~--~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~---~~~~~~i~ 237 (362)
...++|..- |.. .+.+ + ..++-.+..|+..|+.+|.+.-+++++.++. ..++..+.
T Consensus 253 ~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIk 332 (403)
T PF11144_consen 253 FDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIK 332 (403)
T ss_pred EeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence 112223220 100 0000 1 1234567889999999999999999888775 35677776
Q ss_pred CCCcCccccCCCCCcccCCcchhhhcccccccccC
Q 018008 238 GGNHCNLELYPENVSEQGSDQQENQRNNTEQKTEK 272 (362)
Q Consensus 238 g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~~ 272 (362)
+.....-.++.+..|..-+..-..|...+-..|++
T Consensus 333 des~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek 367 (403)
T PF11144_consen 333 DESEIDGKFIKNLEHGMGISDKALFKKELPLMLEK 367 (403)
T ss_pred ChhhccchheeccccCCCCCHHHHHHHHhHHHHHH
Confidence 66666777778888887666555565555555543
No 151
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.50 E-value=1.9e-06 Score=78.37 Aligned_cols=86 Identities=22% Similarity=0.256 Sum_probs=53.8
Q ss_pred HHHHHHHhcCeEEEEEccCCCcCCCC-CCCccchHHHHHHHHHHHHHHhCCC-CCcEEEEEEccchHHHHHHHHhC----
Q 018008 87 IFTELSVHLNVSLMGYDYSGYGHSSG-KPSEQDTYADIEAAYKCLEETYGVK-EEDIILYGQSVGSGPTLELAVRL---- 160 (362)
Q Consensus 87 ~~~~l~~~~g~~vi~~D~~G~G~s~~-~~~~~~~~~d~~~~i~~l~~~~~~~-~~~i~l~GhS~Gg~ia~~~a~~~---- 160 (362)
.+..+ ...||.|+++||.|.|..-. .....+.+-|..++...+....++. ..++.++|||.||..++..+...
T Consensus 18 ~l~~~-L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YA 96 (290)
T PF03583_consen 18 FLAAW-LARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYA 96 (290)
T ss_pred HHHHH-HHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhC
Confidence 33444 57799999999999887210 0111223344444444444434442 36899999999999998776542
Q ss_pred C--C--ccEEEEcCCcc
Q 018008 161 P--R--LRAVILHSPIL 173 (362)
Q Consensus 161 p--~--v~~~vl~~p~~ 173 (362)
| + +.+.++.+|..
T Consensus 97 peL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 97 PELNRDLVGAAAGGPPA 113 (290)
T ss_pred cccccceeEEeccCCcc
Confidence 4 3 66777776644
No 152
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.47 E-value=7.4e-07 Score=79.34 Aligned_cols=150 Identities=19% Similarity=0.230 Sum_probs=85.8
Q ss_pred CCCeEEEEeCCCcCCh--hchHHHHHHHHHhc---CeEEEEEccCCCcCCC-------------CCCCccchHHH--HHH
Q 018008 66 SASLTVLYSHGNAADL--GQMCPIFTELSVHL---NVSLMGYDYSGYGHSS-------------GKPSEQDTYAD--IEA 125 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~--~~~~~~~~~l~~~~---g~~vi~~D~~G~G~s~-------------~~~~~~~~~~d--~~~ 125 (362)
..-|+|+++||..... ......+..+.... ...+++++..+.+... ........+.+ ..+
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 3559999999972211 11223444443332 2455666665544110 00111122322 347
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhcc-ccccccc--cccccccC--CCCC
Q 018008 126 AYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMY-PVKRTFW--FDIYKNID--KIPL 199 (362)
Q Consensus 126 ~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~-~~~~~~~--~~~~~~~~--~~~~ 199 (362)
++.+|.+++.+.+.+..|+|+||||..|+.++.++|+ +.+++.+||.+.....++ +.....| .+.+.... ....
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 181 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQKK 181 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHHTT
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhccc
Confidence 7888888888765558999999999999999999996 999999998754321111 0000111 01111111 1223
Q ss_pred CCCCEEEEEeCCCCCC
Q 018008 200 VECPVLVIHGTEDEVV 215 (362)
Q Consensus 200 i~~P~lvi~G~~D~~v 215 (362)
...++++..|+.|...
T Consensus 182 ~~~~i~l~~G~~d~~~ 197 (251)
T PF00756_consen 182 KPLRIYLDVGTKDEFG 197 (251)
T ss_dssp SEEEEEEEEETTSTTH
T ss_pred CCCeEEEEeCCCCccc
Confidence 4567899999999843
No 153
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.43 E-value=3.4e-07 Score=79.06 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=53.5
Q ss_pred eEEEEeCCCcCCh-hchHHHHHHHHHhcCeE---EEEEccCCCcCCCCCC---CccchHHHHHHHHHHHHHHhCCCCCcE
Q 018008 69 LTVLYSHGNAADL-GQMCPIFTELSVHLNVS---LMGYDYSGYGHSSGKP---SEQDTYADIEAAYKCLEETYGVKEEDI 141 (362)
Q Consensus 69 p~vv~lHG~~~~~-~~~~~~~~~l~~~~g~~---vi~~D~~G~G~s~~~~---~~~~~~~d~~~~i~~l~~~~~~~~~~i 141 (362)
.||||+||.+++. ..|..+...| ...||. +++++|-......... .......++.+.|+.+++.-| .+|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l-~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG---akV 77 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYL-KAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG---AKV 77 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHH-HHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-----E
T ss_pred CCEEEECCCCcchhhCHHHHHHHH-HHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC---CEE
Confidence 4799999999854 5555555555 788998 7898885332211000 012234678888888888876 499
Q ss_pred EEEEEccchHHHHHHHHhC
Q 018008 142 ILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 142 ~l~GhS~Gg~ia~~~a~~~ 160 (362)
-|+||||||.++-.+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999998887654
No 154
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.43 E-value=1e-06 Score=73.53 Aligned_cols=170 Identities=18% Similarity=0.295 Sum_probs=99.9
Q ss_pred EEEEEeCCC----CCeEEEEeCCCcCChhchHH--HHHHHHHhcCeEEEEEccCCCcCCC-CCC-C--------------
Q 018008 58 VAMYVKNPS----ASLTVLYSHGNAADLGQMCP--IFTELSVHLNVSLMGYDYSGYGHSS-GKP-S-------------- 115 (362)
Q Consensus 58 ~~~~~~~~~----~~p~vv~lHG~~~~~~~~~~--~~~~l~~~~g~~vi~~D~~G~G~s~-~~~-~-------------- 115 (362)
..+|+++.. .-|++.++-|.......+.+ -+.+.+.++|+.|+.+|-.-.|..- +.+ .
T Consensus 30 f~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt 109 (283)
T KOG3101|consen 30 FGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNAT 109 (283)
T ss_pred EEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecc
Confidence 345665432 24899999999987766643 4556678889999999975443321 000 0
Q ss_pred ---ccc---hHHHHHHHHHHHHH--HhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhcccc----
Q 018008 116 ---EQD---TYADIEAAYKCLEE--TYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMYPV---- 182 (362)
Q Consensus 116 ---~~~---~~~d~~~~i~~l~~--~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~~~---- 182 (362)
+.. +++-+.+.+..++. ...+++.++.+.||||||+-|+..+.+.|. .+.+-..+|+.......+..
T Consensus 110 ~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~ 189 (283)
T KOG3101|consen 110 QEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFT 189 (283)
T ss_pred cchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhh
Confidence 001 11222222222222 233567889999999999999999988884 77887777776543222111
Q ss_pred -----ccccccccccc---cCCCCCCCCCEEEEEeCCCCCCCch-hHHHHHHHhc
Q 018008 183 -----KRTFWFDIYKN---IDKIPLVECPVLVIHGTEDEVVDFS-HGKQLWELCK 228 (362)
Q Consensus 183 -----~~~~~~~~~~~---~~~~~~i~~P~lvi~G~~D~~v~~~-~~~~l~~~~~ 228 (362)
....| +.|+. +...+....-+||-.|..|++..-. --+.+.++++
T Consensus 190 gYLG~~ka~W-~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~ 243 (283)
T KOG3101|consen 190 GYLGDNKAQW-EAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACK 243 (283)
T ss_pred cccCCChHHH-hhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhh
Confidence 11111 12222 3334444556899999999987622 1234555555
No 155
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.42 E-value=1.1e-06 Score=83.92 Aligned_cols=91 Identities=11% Similarity=0.136 Sum_probs=70.5
Q ss_pred hchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCC-ccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 82 GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPS-EQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 82 ~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
..|..++..| .+.||.+ ..|++|+|.+..... ....++++.+.++.+.+..+. .+++|+||||||.++..++..+
T Consensus 108 ~~~~~li~~L-~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~--~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 108 YYFHDMIEQL-IKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG--KKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred HHHHHHHHHH-HHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECHhHHHHHHHHHHC
Confidence 4455566555 7789854 789999998875432 234567888888888888765 8999999999999999999887
Q ss_pred CC-----ccEEEEcCCccccc
Q 018008 161 PR-----LRAVILHSPILSGL 176 (362)
Q Consensus 161 p~-----v~~~vl~~p~~~~~ 176 (362)
|+ |+.+|++++...+.
T Consensus 184 p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CHhHHhHhccEEEECCCCCCC
Confidence 73 89999998766543
No 156
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.41 E-value=1.6e-06 Score=85.18 Aligned_cols=108 Identities=17% Similarity=0.251 Sum_probs=71.1
Q ss_pred CCCeEEEEeCCCcCChhchH-HHHHHHHHhcC-eEEEEEccC-CC-cC--CCC-CCCccchHHHHHHHHHHHHH---HhC
Q 018008 66 SASLTVLYSHGNAADLGQMC-PIFTELSVHLN-VSLMGYDYS-GY-GH--SSG-KPSEQDTYADIEAAYKCLEE---TYG 135 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~-~~~~~l~~~~g-~~vi~~D~~-G~-G~--s~~-~~~~~~~~~d~~~~i~~l~~---~~~ 135 (362)
...|+||++||++...+.-. .....+....+ +.|+.++|| |. |. ... .......+.|...+++++.+ .+|
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 35699999999864322111 12233434444 999999999 32 22 211 11112346788888888876 467
Q ss_pred CCCCcEEEEEEccchHHHHHHHHhCC---CccEEEEcCCcc
Q 018008 136 VKEEDIILYGQSVGSGPTLELAVRLP---RLRAVILHSPIL 173 (362)
Q Consensus 136 ~~~~~i~l~GhS~Gg~ia~~~a~~~p---~v~~~vl~~p~~ 173 (362)
.|+++|.|+|+|.||..+..++.... -++++|++++..
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 89999999999999999988877532 278888877543
No 157
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.36 E-value=1.7e-06 Score=82.50 Aligned_cols=162 Identities=15% Similarity=0.118 Sum_probs=99.6
Q ss_pred CCeEEEEeCCCc-C-ChhchHHHHHHHHHhcC--eEEEEEccCCCcCCCCCCCccchHHHHHHHHH----HHHHHhCCCC
Q 018008 67 ASLTVLYSHGNA-A-DLGQMCPIFTELSVHLN--VSLMGYDYSGYGHSSGKPSEQDTYADIEAAYK----CLEETYGVKE 138 (362)
Q Consensus 67 ~~p~vv~lHG~~-~-~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~----~l~~~~~~~~ 138 (362)
..|.+|++||.+ . ...+|+..+...+.-.| ..+.++|++.--. + .......+.+..+.+ .+..++ +.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig--G-~nI~h~ae~~vSf~r~kvlei~gef--ph 249 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG--G-ANIKHAAEYSVSFDRYKVLEITGEF--PH 249 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC--C-cchHHHHHHHHHHhhhhhhhhhccC--CC
Confidence 468899999987 2 11223222222222223 4456677763110 0 000111111222222 222233 44
Q ss_pred CcEEEEEEccchHHHHHHHHhCCC--ccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCC
Q 018008 139 EDIILYGQSVGSGPTLELAVRLPR--LRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVD 216 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~p~--v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~ 216 (362)
.+|+|+|.|||+.++........+ |+++|.++=.+...+..... ..+.+-.++.|+|++.|.+|..++
T Consensus 250 a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgi----------rDE~Lldmk~PVLFV~Gsnd~mcs 319 (784)
T KOG3253|consen 250 APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGI----------RDEALLDMKQPVLFVIGSNDHMCS 319 (784)
T ss_pred CceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCC----------cchhhHhcCCceEEEecCCcccCC
Confidence 899999999998888877765553 89999887444332211100 112333467899999999999999
Q ss_pred chhHHHHHHHhccCcceEEeCCCCcCc
Q 018008 217 FSHGKQLWELCKDKYEPLWLKGGNHCN 243 (362)
Q Consensus 217 ~~~~~~l~~~~~~~~~~~~i~g~~h~~ 243 (362)
+...+++.++++...+++++.+++|..
T Consensus 320 pn~ME~vreKMqA~~elhVI~~adhsm 346 (784)
T KOG3253|consen 320 PNSMEEVREKMQAEVELHVIGGADHSM 346 (784)
T ss_pred HHHHHHHHHHhhccceEEEecCCCccc
Confidence 999999999999999999999999943
No 158
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.33 E-value=2.6e-05 Score=71.44 Aligned_cols=152 Identities=16% Similarity=0.168 Sum_probs=94.3
Q ss_pred EEEEEcCCCCEEEEEEEeCC--CCCeEEEEeCCCcCChh--chHHHHHHHHHhcCeEEEEEccCC--CcCCC--------
Q 018008 46 VLKLSTKKGNEIVAMYVKNP--SASLTVLYSHGNAADLG--QMCPIFTELSVHLNVSLMGYDYSG--YGHSS-------- 111 (362)
Q Consensus 46 ~~~i~~~~g~~l~~~~~~~~--~~~p~vv~lHG~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G--~G~s~-------- 111 (362)
.+.+.. ++...-.+|.+.. .....||++||.+.+.. .....+..-+.+.|+.++.+.+|. .....
T Consensus 64 ~~~L~~-~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 64 VQWLQA-GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred cEEeec-CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 334444 4555555555543 35679999999998752 223444555588899999988886 11000
Q ss_pred ----C--C-CCc-------------------cchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC--Cc
Q 018008 112 ----G--K-PSE-------------------QDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP--RL 163 (362)
Q Consensus 112 ----~--~-~~~-------------------~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p--~v 163 (362)
+ . ... .....-+.+++.++. .++. .+++|+||+.|++.++.+....+ .+
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~-~~~~--~~ivlIg~G~gA~~~~~~la~~~~~~~ 219 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQ-QQGG--KNIVLIGHGTGAGWAARYLAEKPPPMP 219 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHH-hcCC--ceEEEEEeChhHHHHHHHHhcCCCccc
Confidence 0 0 000 001122333444333 3332 56999999999999999999887 39
Q ss_pred cEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCC
Q 018008 164 RAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTED 212 (362)
Q Consensus 164 ~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D 212 (362)
+++|++++....... ...-.+.+..+++|+|=|++.+.
T Consensus 220 daLV~I~a~~p~~~~-----------n~~l~~~la~l~iPvLDi~~~~~ 257 (310)
T PF12048_consen 220 DALVLINAYWPQPDR-----------NPALAEQLAQLKIPVLDIYSADN 257 (310)
T ss_pred CeEEEEeCCCCcchh-----------hhhHHHHhhccCCCEEEEecCCC
Confidence 999999988653211 01112346678899999998873
No 159
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.32 E-value=6.6e-06 Score=90.21 Aligned_cols=100 Identities=15% Similarity=0.031 Sum_probs=73.8
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
..++++++||++++...|..+...+ . .++.|++++++|++.... ....++++.+.+...+.... ...+++++||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l-~-~~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~-~~~p~~l~G~ 1140 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYL-D-PQWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQ-PHGPYHLLGY 1140 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhc-C-CCCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhC-CCCCEEEEEe
Confidence 4578999999999887766666655 3 368889999999986532 23566666666555555443 2258999999
Q ss_pred ccchHHHHHHHHhC---C-CccEEEEcCCc
Q 018008 147 SVGSGPTLELAVRL---P-RLRAVILHSPI 172 (362)
Q Consensus 147 S~Gg~ia~~~a~~~---p-~v~~~vl~~p~ 172 (362)
|+||.++..+|.+. + ++..++++++.
T Consensus 1141 S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1141 SLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred chhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999999863 4 48888888764
No 160
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.31 E-value=5.8e-06 Score=78.01 Aligned_cols=107 Identities=19% Similarity=0.247 Sum_probs=71.6
Q ss_pred CCCeEEEEeCCCcCCh---hchHHHHHHHHHhcCeEEEEEccCC--CcCCCC-----CCC--ccchHHHHHHHHHHHHH-
Q 018008 66 SASLTVLYSHGNAADL---GQMCPIFTELSVHLNVSLMGYDYSG--YGHSSG-----KPS--EQDTYADIEAAYKCLEE- 132 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~---~~~~~~~~~l~~~~g~~vi~~D~~G--~G~s~~-----~~~--~~~~~~d~~~~i~~l~~- 132 (362)
.+.|++|||||++... ......-..|.++-++.|+.+|||- .|.-.. ... ...-+.|+..+++|+.+
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 4569999999986332 2222233445444349999999983 232211 011 11245788777888765
Q ss_pred --HhCCCCCcEEEEEEccchHHHHHHHHhCCC----ccEEEEcCCcc
Q 018008 133 --TYGVKEEDIILYGQSVGSGPTLELAVRLPR----LRAVILHSPIL 173 (362)
Q Consensus 133 --~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p~~ 173 (362)
.+|-|++.|.|+|+|.||+.++.+.+. |. +..+|+.|+..
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 688899999999999999999888765 53 67777777655
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=98.23 E-value=1.8e-05 Score=63.71 Aligned_cols=153 Identities=19% Similarity=0.284 Sum_probs=88.2
Q ss_pred EEEeCCCcCChhchHHHHH-HHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccc
Q 018008 71 VLYSHGNAADLGQMCPIFT-ELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVG 149 (362)
Q Consensus 71 vv~lHG~~~~~~~~~~~~~-~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~G 149 (362)
|||+||+.++.+.....+. +++.. |.|-.+.+.+.+ .....++.+.++.++.+.+- ....|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~--------~~~~i~y~~p~l--~h~p~~a~~ele~~i~~~~~--~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE--------DVRDIEYSTPHL--PHDPQQALKELEKAVQELGD--ESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc--------cccceeeecCCC--CCCHHHHHHHHHHHHHHcCC--CCceEEeecch
Confidence 8999999998777665433 33222 222222233222 23445666667777777663 55899999999
Q ss_pred hHHHHHHHHhCCCccEEEEcCCccccchhcccccc----ccccccc----cc-----cCCCCCCCCC-EEEEEeCC-CCC
Q 018008 150 SGPTLELAVRLPRLRAVILHSPILSGLRVMYPVKR----TFWFDIY----KN-----IDKIPLVECP-VLVIHGTE-DEV 214 (362)
Q Consensus 150 g~ia~~~a~~~p~v~~~vl~~p~~~~~~~~~~~~~----~~~~~~~----~~-----~~~~~~i~~P-~lvi~G~~-D~~ 214 (362)
|+.+.+++.+.. ++++ +++|.+...+.+..... .+.-..| .. ...+..++.| .+++.... |++
T Consensus 70 GY~At~l~~~~G-irav-~~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~~~~~~~l~~p~~~~lL~qtgDEv 147 (191)
T COG3150 70 GYYATWLGFLCG-IRAV-VFNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLCVLQFRELNRPRCLVLLSQTGDEV 147 (191)
T ss_pred HHHHHHHHHHhC-Chhh-hcCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHHHhhccccCCCcEEEeecccccHH
Confidence 999999998874 5554 45676654443322111 1111111 11 1222333334 56666665 999
Q ss_pred CCchhHHHHHHHhccCcceEEeCCCCc
Q 018008 215 VDFSHGKQLWELCKDKYEPLWLKGGNH 241 (362)
Q Consensus 215 v~~~~~~~l~~~~~~~~~~~~i~g~~h 241 (362)
.+...+.+.+..+. ..+.+|++|
T Consensus 148 LDyr~a~a~y~~~~----~~V~dgg~H 170 (191)
T COG3150 148 LDYRQAVAYYHPCY----EIVWDGGDH 170 (191)
T ss_pred HHHHHHHHHhhhhh----heeecCCCc
Confidence 88887776666544 345556666
No 162
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.23 E-value=4.8e-06 Score=82.51 Aligned_cols=105 Identities=20% Similarity=0.276 Sum_probs=68.0
Q ss_pred CCeEEEEeCCCcCChhc---hHHHHHHHHHhcCeEEEEEccCC--CcCCCC-CCC---ccchHHHHHHHHHHHHH---Hh
Q 018008 67 ASLTVLYSHGNAADLGQ---MCPIFTELSVHLNVSLMGYDYSG--YGHSSG-KPS---EQDTYADIEAAYKCLEE---TY 134 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~---~~~~~~~l~~~~g~~vi~~D~~G--~G~s~~-~~~---~~~~~~d~~~~i~~l~~---~~ 134 (362)
..|++|++||++...+. .......++...++.||+++||- +|.-.. ... ...-+.|...+++|+.+ .+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 35999999998743321 12223345567799999999993 222211 111 23456888999999987 46
Q ss_pred CCCCCcEEEEEEccchHHHHHHHHhCC-C--ccEEEEcCC
Q 018008 135 GVKEEDIILYGQSVGSGPTLELAVRLP-R--LRAVILHSP 171 (362)
Q Consensus 135 ~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~--v~~~vl~~p 171 (362)
|-|+++|.|+|||.||..+..++.... + ++++|+.|+
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 778999999999999999888776522 2 999999887
No 163
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.21 E-value=2.6e-05 Score=73.88 Aligned_cols=118 Identities=16% Similarity=0.204 Sum_probs=70.6
Q ss_pred cCCCCCCeeEEEEEcCCCCEEEEEEEeCCCCCeEEEEe----CCCc--CChhchHHHHHHHHHhcCeEEEEEccCCCcCC
Q 018008 37 DVHQRDDVDVLKLSTKKGNEIVAMYVKNPSASLTVLYS----HGNA--ADLGQMCPIFTELSVHLNVSLMGYDYSGYGHS 110 (362)
Q Consensus 37 ~~~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~p~vv~l----HG~~--~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s 110 (362)
.++.+.++--++|.-+.|..+ .+..+|.||+= ||-| +-. . ...+... .+.|..|+.+.+.
T Consensus 44 ~l~rPvNYaLlrI~pp~~~~~------d~~krP~vViDPRAGHGpGIGGFK-~-dSevG~A-L~~GHPvYFV~F~----- 109 (581)
T PF11339_consen 44 DLPRPVNYALLRITPPEGVPV------DPTKRPFVVIDPRAGHGPGIGGFK-P-DSEVGVA-LRAGHPVYFVGFF----- 109 (581)
T ss_pred cCCCCcceeEEEeECCCCCCC------CCCCCCeEEeCCCCCCCCCccCCC-c-ccHHHHH-HHcCCCeEEEEec-----
Confidence 356677777788877777322 33445555554 3322 211 1 2233333 3447776666554
Q ss_pred CCCCCccchHHHHHHHHHHHHHH----hCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcC
Q 018008 111 SGKPSEQDTYADIEAAYKCLEET----YGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHS 170 (362)
Q Consensus 111 ~~~~~~~~~~~d~~~~i~~l~~~----~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~ 170 (362)
+.+....+++|+..+...++++ .. +..+.+|+|.|.||..++++|+..|+ +.-+|+.+
T Consensus 110 -p~P~pgQTl~DV~~ae~~Fv~~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaG 172 (581)
T PF11339_consen 110 -PEPEPGQTLEDVMRAEAAFVEEVAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAG 172 (581)
T ss_pred -CCCCCCCcHHHHHHHHHHHHHHHHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCccCceeecC
Confidence 2344456777766555554443 22 12388999999999999999999997 55555544
No 164
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.18 E-value=1e-05 Score=71.43 Aligned_cols=99 Identities=19% Similarity=0.298 Sum_probs=71.3
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHH-HHHHHHHHHhCCCCCcEEEEEEc
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIE-AAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~-~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
|+++++|+.++....|..+...+ ... ..|+.++.+|++... .....++++. ..++.|.+.- +..++.|+|||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l-~~~-~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~Q--P~GPy~L~G~S 73 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAAL-GPL-LPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQ--PEGPYVLLGWS 73 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHh-ccC-ceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhC--CCCCEEEEeec
Confidence 57999999999876666666666 332 667999999987532 1233444443 4444554443 44799999999
Q ss_pred cchHHHHHHHHhCC----CccEEEEcCCccc
Q 018008 148 VGSGPTLELAVRLP----RLRAVILHSPILS 174 (362)
Q Consensus 148 ~Gg~ia~~~a~~~p----~v~~~vl~~p~~~ 174 (362)
+||.+|..+|.+.. .|..++++++...
T Consensus 74 ~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 74 LGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999998754 3899999887765
No 165
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.12 E-value=1.8e-05 Score=76.43 Aligned_cols=108 Identities=16% Similarity=0.224 Sum_probs=72.3
Q ss_pred CCeEEEEeCCCcCChhch--HHHHHHHHHhcCeEEEEEccCCCcCCCCCCC----------ccchHHHHHHHHHHHHHHh
Q 018008 67 ASLTVLYSHGNAADLGQM--CPIFTELSVHLNVSLMGYDYSGYGHSSGKPS----------EQDTYADIEAAYKCLEETY 134 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~--~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~----------~~~~~~d~~~~i~~l~~~~ 134 (362)
.+|++|++-|-+.-...+ ...+.+++.+.|-.++++.+|-+|.|.+... ....++|++..+..+.+++
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 378888887765432222 2367788888999999999999999984321 1334578888888888766
Q ss_pred CC-CCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc
Q 018008 135 GV-KEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS 174 (362)
Q Consensus 135 ~~-~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~ 174 (362)
.. +..+++++|-|+||.++.++-.++|+ |.|.+..|+.+.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 33 44699999999999999999999998 888888876654
No 166
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.11 E-value=6.5e-07 Score=81.11 Aligned_cols=176 Identities=20% Similarity=0.202 Sum_probs=90.3
Q ss_pred eEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHh-CCCCCcEEEEEEc
Q 018008 69 LTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETY-GVKEEDIILYGQS 147 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~~i~l~GhS 147 (362)
..++..||...+...............+..++..|+++++.+.+.........+...+..++.... ..+..+++++|.|
T Consensus 89 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 168 (299)
T COG1073 89 ESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGES 168 (299)
T ss_pred ccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeec
Confidence 345555665443333333332333344555556666666665544333222222222222222111 0112567777788
Q ss_pred cchHHHHHHHHhC----C-CccEEEEcCCcccc-chhcccccc-c--cccccccccCCCCCCC-CCEEEEEeCCCCCCCc
Q 018008 148 VGSGPTLELAVRL----P-RLRAVILHSPILSG-LRVMYPVKR-T--FWFDIYKNIDKIPLVE-CPVLVIHGTEDEVVDF 217 (362)
Q Consensus 148 ~Gg~ia~~~a~~~----p-~v~~~vl~~p~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~i~-~P~lvi~G~~D~~v~~ 217 (362)
+||..++...... + .+..++..++.... .....-... . ..+...+....+..+. +|+|+++|..|.++|.
T Consensus 169 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~ 248 (299)
T COG1073 169 LGGALALLLLGANPELARELIDYLITPGGFAPLPAPEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPL 248 (299)
T ss_pred cCceeeccccccchHHHHhhhhhhccCCCCCCCCcccccccccccchhhhccCcchhhHhhcCCcceEEEecCCCcccch
Confidence 7777777655432 1 24444444444332 110000000 0 0111222223333344 7999999999999999
Q ss_pred hhHHHHHHHhcc-CcceEEeCCCCcCcc
Q 018008 218 SHGKQLWELCKD-KYEPLWLKGGNHCNL 244 (362)
Q Consensus 218 ~~~~~l~~~~~~-~~~~~~i~g~~h~~~ 244 (362)
..+..+++.... +.+.+++++++|...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 276 (299)
T COG1073 249 RDAEDLYEAARERPKKLLFVPGGGHIDL 276 (299)
T ss_pred hhhHHHHhhhccCCceEEEecCCccccc
Confidence 999999999988 667777777776443
No 167
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.07 E-value=5e-05 Score=67.18 Aligned_cols=188 Identities=12% Similarity=0.116 Sum_probs=105.7
Q ss_pred EEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHH-HHHHHHHHhCCCCCcEEEEEEcc
Q 018008 70 TVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEA-AYKCLEETYGVKEEDIILYGQSV 148 (362)
Q Consensus 70 ~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~-~i~~l~~~~~~~~~~i~l~GhS~ 148 (362)
++|++=||.+..........++..+.|+.++.+-.+-.....+. .....+.+ .++.+.+.-.-...++++-.+|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 35666677655433333344444668999988866532222111 22222222 33333322221113899999999
Q ss_pred chHHHHHHHHh-----------CCCccEEEEcCCccccc-----h---hcccccc-ccc---------------------
Q 018008 149 GSGPTLELAVR-----------LPRLRAVILHSPILSGL-----R---VMYPVKR-TFW--------------------- 187 (362)
Q Consensus 149 Gg~ia~~~a~~-----------~p~v~~~vl~~p~~~~~-----~---~~~~~~~-~~~--------------------- 187 (362)
||...+..... .|+++++|+.|..-... . ...+... .++
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIF 156 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 88887765441 12389999988542211 0 0011100 000
Q ss_pred ---------cccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCcccCC-c
Q 018008 188 ---------FDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVSEQGS-D 257 (362)
Q Consensus 188 ---------~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H~~~~-e 257 (362)
...++. .......+|-|+++++.|.+++.+..++..+..+.. +..+..+.+.+..|..++ +
T Consensus 157 ~~~~~~~~~~~~~~~-~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~--------G~~V~~~~f~~S~HV~H~r~ 227 (240)
T PF05705_consen 157 GYPDVQEYYRRALND-FANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRK--------GWDVRAEKFEDSPHVAHLRK 227 (240)
T ss_pred cCCcHHHHHHHHHhh-hhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHc--------CCeEEEecCCCCchhhhccc
Confidence 000111 122235689999999999999999999988887753 223455556666666554 6
Q ss_pred chhhhcccccccc
Q 018008 258 QQENQRNNTEQKT 270 (362)
Q Consensus 258 ~~~~~~~~i~~fl 270 (362)
+|+++.+.+.+|+
T Consensus 228 ~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 228 HPDRYWRAVDEFW 240 (240)
T ss_pred CHHHHHHHHHhhC
Confidence 7888888887764
No 168
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.06 E-value=3.3e-05 Score=70.96 Aligned_cols=105 Identities=20% Similarity=0.310 Sum_probs=79.1
Q ss_pred eEEEEeCCCcCChhchH---HHHHHHHHhcCeEEEEEccCCCcCCCCCCCc-------------cchHHHHHHHHHHHHH
Q 018008 69 LTVLYSHGNAADLGQMC---PIFTELSVHLNVSLMGYDYSGYGHSSGKPSE-------------QDTYADIEAAYKCLEE 132 (362)
Q Consensus 69 p~vv~lHG~~~~~~~~~---~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~-------------~~~~~d~~~~i~~l~~ 132 (362)
.+|+|.-|+-++...+. ..+.+++.+++-.+|-+..|-+|+|.+.-.. .+.++|.+..+..|+.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 67888889888765553 3566677777888899999999998742211 3345688888888887
Q ss_pred HhCCCCCcEEEEEEccchHHHHHHHHhCCC-c-cEEEEcCCcc
Q 018008 133 TYGVKEEDIILYGQSVGSGPTLELAVRLPR-L-RAVILHSPIL 173 (362)
Q Consensus 133 ~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v-~~~vl~~p~~ 173 (362)
.++-...+++.+|-|+||+++.++=.++|+ + .++...+|++
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 766556799999999999999999999997 3 4444445544
No 169
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.01 E-value=2.4e-05 Score=77.11 Aligned_cols=147 Identities=21% Similarity=0.269 Sum_probs=81.3
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHH---------------hcCeEEEEEccCC-----CcCCCCCCCccchHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSV---------------HLNVSLMGYDYSG-----YGHSSGKPSEQDTYADIEAA 126 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~---------------~~g~~vi~~D~~G-----~G~s~~~~~~~~~~~d~~~~ 126 (362)
++-+|+|++|+.++.++.......... ...+..+++|+-+ ||++- ....+-+.++
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l-----~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL-----LDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH-----HHHHHHHHHH
Confidence 345899999999987776655544321 0134556777653 12111 2233445667
Q ss_pred HHHHHHHhCC----C---CCcEEEEEEccchHHHHHHHHhCCC----ccEEEEcCCcccc--------chhccccccccc
Q 018008 127 YKCLEETYGV----K---EEDIILYGQSVGSGPTLELAVRLPR----LRAVILHSPILSG--------LRVMYPVKRTFW 187 (362)
Q Consensus 127 i~~l~~~~~~----~---~~~i~l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p~~~~--------~~~~~~~~~~~~ 187 (362)
|.++++.|.- + |..|+|+||||||.+|..++..-.. |.-++..+..... +-..+.....+|
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~D~~l~~fy~~vnn~W 242 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPLDRFLLRFYLLVNNYW 242 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCCcHHHHHHHHHHHHHH
Confidence 7777776532 2 5679999999999998876653212 5555554422111 112233445566
Q ss_pred cccccccCCCCCCCCCEEEEE-eCCCCCCCch
Q 018008 188 FDIYKNIDKIPLVECPVLVIH-GTEDEVVDFS 218 (362)
Q Consensus 188 ~~~~~~~~~~~~i~~P~lvi~-G~~D~~v~~~ 218 (362)
...+...++.-...+-++-|. |-.|..++.+
T Consensus 243 ~k~~~~~~~~~ls~V~vVSisGG~~Dy~V~se 274 (973)
T KOG3724|consen 243 NKLQNNNSDPLLSHVGVVSISGGIRDYQVPSE 274 (973)
T ss_pred HHHHhccccchhcceEEEEEecCccccccCcc
Confidence 665554433222233333344 4467666665
No 170
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.95 E-value=7e-05 Score=68.06 Aligned_cols=107 Identities=20% Similarity=0.277 Sum_probs=76.6
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCe--EEEEEccCCCcCCCCC----CCccchHHHHHHHHHHHHHHhCCCCC
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNV--SLMGYDYSGYGHSSGK----PSEQDTYADIEAAYKCLEETYGVKEE 139 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~--~vi~~D~~G~G~s~~~----~~~~~~~~d~~~~i~~l~~~~~~~~~ 139 (362)
..+.++||+||++.+...--....+.....|+ ..+.+-||..|.--+. .+..+.-.+++..+.+|.+.... +
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~--~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV--K 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC--c
Confidence 45789999999988765555555555555553 4567888866543321 22234457889999999988766 8
Q ss_pred cEEEEEEccchHHHHHHHHhC--------C-CccEEEEcCCccc
Q 018008 140 DIILYGQSVGSGPTLELAVRL--------P-RLRAVILHSPILS 174 (362)
Q Consensus 140 ~i~l~GhS~Gg~ia~~~a~~~--------p-~v~~~vl~~p~~~ 174 (362)
+|+|++||||.++++....+. + +|+-+|+-+|=.+
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999999999876642 1 3788888888654
No 171
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.95 E-value=3.4e-05 Score=67.13 Aligned_cols=88 Identities=19% Similarity=0.115 Sum_probs=44.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHH---hcCeEEEEEccCCCcCCCCCCCccchHHH-HHHHHHHHHH---HhCCCCC
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSV---HLNVSLMGYDYSGYGHSSGKPSEQDTYAD-IEAAYKCLEE---TYGVKEE 139 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~---~~g~~vi~~D~~G~G~s~~~~~~~~~~~d-~~~~i~~l~~---~~~~~~~ 139 (362)
+.-.||++||..++..+|..+-..+.. +..-. .+.+.++.... ......++. ....++.+.+ .......
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~--~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNA--RIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchh--hhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccc
Confidence 445899999999998777554444432 11111 11111111111 111112221 2223333333 2332225
Q ss_pred cEEEEEEccchHHHHHHHH
Q 018008 140 DIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 140 ~i~l~GhS~Gg~ia~~~a~ 158 (362)
+|+++||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999876554
No 172
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.93 E-value=0.00028 Score=62.79 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=68.3
Q ss_pred CCeEEEEeCCCcC-ChhchHHHHHHHHHhc---CeEEEEEccCCCcCCCCC-CCccchH-HHHHHHHHHHHHHhCC--CC
Q 018008 67 ASLTVLYSHGNAA-DLGQMCPIFTELSVHL---NVSLMGYDYSGYGHSSGK-PSEQDTY-ADIEAAYKCLEETYGV--KE 138 (362)
Q Consensus 67 ~~p~vv~lHG~~~-~~~~~~~~~~~l~~~~---g~~vi~~D~~G~G~s~~~-~~~~~~~-~d~~~~i~~l~~~~~~--~~ 138 (362)
+.|++++.||-.. .......++..+..+. ...++.+|+----..... ....... .-+.+.+.++.+.|.. +.
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a 176 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADA 176 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccC
Confidence 5699999998532 2233345555554432 355677776431100000 1111222 2345677777777765 34
Q ss_pred CcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc
Q 018008 139 EDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS 174 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~ 174 (362)
..-+|+|.|+||.+++..+.++|+ +..++..||.+.
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 567899999999999999999996 888888888764
No 173
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.90 E-value=0.0003 Score=59.49 Aligned_cols=107 Identities=20% Similarity=0.237 Sum_probs=72.5
Q ss_pred CCeEEEEeCCCcCCh--hchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEE
Q 018008 67 ASLTVLYSHGNAADL--GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILY 144 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~--~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~ 144 (362)
.+-.|||+.|.+... ..+...+...+.+.+|.++-+.++.+-...+........+|+..+++.+...-. . ..|+|+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~f-S-t~vVL~ 112 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGF-S-TDVVLV 112 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCc-c-cceEEE
Confidence 346789999988754 344566666778889998888766332222222334456677666665543321 1 589999
Q ss_pred EEccchHHHHHHHHhC--CC-ccEEEEcCCcccc
Q 018008 145 GQSVGSGPTLELAVRL--PR-LRAVILHSPILSG 175 (362)
Q Consensus 145 GhS~Gg~ia~~~a~~~--p~-v~~~vl~~p~~~~ 175 (362)
|||.|..-.+.+..+. ++ |.+.|+.+|+.+.
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 9999999988888543 33 8999999997753
No 174
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.90 E-value=0.001 Score=58.51 Aligned_cols=49 Identities=24% Similarity=0.266 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCcc
Q 018008 125 AAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPIL 173 (362)
Q Consensus 125 ~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~ 173 (362)
+...++.+.+.++.++..++|||+||.+++.....+|+ +...++++|-+
T Consensus 123 ~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 123 QLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred hhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 33444555687888889999999999999999999986 89999998864
No 175
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.82 E-value=7.1e-05 Score=69.53 Aligned_cols=103 Identities=19% Similarity=0.186 Sum_probs=74.1
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeE---EEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVS---LMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIIL 143 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l 143 (362)
..-+++++||.+.+...|..+-.. +...|+. +..+++++. ..........+.+...+..++...+. +++.|
T Consensus 58 ~~~pivlVhG~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~ql~~~V~~~l~~~ga--~~v~L 131 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLPLDYR-LAILGWLTNGVYAFELSGG---DGTYSLAVRGEQLFAYVDEVLAKTGA--KKVNL 131 (336)
T ss_pred CCceEEEEccCcCCcchhhhhhhh-hcchHHHhccccccccccc---CCCccccccHHHHHHHHHHHHhhcCC--CceEE
Confidence 355899999997766665554433 3666665 677777754 11222233456677777777777776 89999
Q ss_pred EEEccchHHHHHHHHhCC---CccEEEEcCCcccc
Q 018008 144 YGQSVGSGPTLELAVRLP---RLRAVILHSPILSG 175 (362)
Q Consensus 144 ~GhS~Gg~ia~~~a~~~p---~v~~~vl~~p~~~~ 175 (362)
+||||||..+..++...+ .|+.++.+++.-.+
T Consensus 132 igHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 132 IGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred EeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999999999998888 39999998876544
No 176
>COG0627 Predicted esterase [General function prediction only]
Probab=97.78 E-value=0.00021 Score=65.34 Aligned_cols=110 Identities=16% Similarity=0.125 Sum_probs=71.4
Q ss_pred CCeEEEEeCCCcCChhch--HHHHHHHHHhcCeEEEEEccC--------------CCcCCC------CCCCcc-chH-HH
Q 018008 67 ASLTVLYSHGNAADLGQM--CPIFTELSVHLNVSLMGYDYS--------------GYGHSS------GKPSEQ-DTY-AD 122 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~--~~~~~~l~~~~g~~vi~~D~~--------------G~G~s~------~~~~~~-~~~-~d 122 (362)
.-|+++++||...+...+ ..-+.......|+.++++|-. |.+.|- ++.... +.+ .-
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 458899999988774333 345666777888888887443 222211 000011 222 33
Q ss_pred HHHHHH-HHHHHhCCCCC--cEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccc
Q 018008 123 IEAAYK-CLEETYGVKEE--DIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGL 176 (362)
Q Consensus 123 ~~~~i~-~l~~~~~~~~~--~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~ 176 (362)
+...+. .+.+.+..+.+ ...++||||||+-|+.+|+.+|+ +..+..++|+++..
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 444444 44555654432 78999999999999999999984 89999998887644
No 177
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.62 E-value=0.0016 Score=60.66 Aligned_cols=108 Identities=18% Similarity=0.215 Sum_probs=74.0
Q ss_pred hCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcC-Cccccchhc---ccccc--------cc---------------
Q 018008 134 YGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHS-PILSGLRVM---YPVKR--------TF--------------- 186 (362)
Q Consensus 134 ~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~-p~~~~~~~~---~~~~~--------~~--------------- 186 (362)
.+++.+++++.|.|==|..++..|+..|+|.+++-+. +++.....+ +..-. .|
T Consensus 167 ~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~ 246 (367)
T PF10142_consen 167 FGVNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFD 246 (367)
T ss_pred cCCCccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHH
Confidence 4555699999999999999999999888898888754 222211111 00000 00
Q ss_pred -ccccccccCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCc
Q 018008 187 -WFDIYKNIDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNH 241 (362)
Q Consensus 187 -~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h 241 (362)
..+..++.....++++|-++|.|..|++..+....-++..+++.+.+..+++.+|
T Consensus 247 ~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H 302 (367)
T PF10142_consen 247 KLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGH 302 (367)
T ss_pred HHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCc
Confidence 0112233334456689999999999999999999999999998665655555555
No 178
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.50 E-value=0.00022 Score=68.25 Aligned_cols=111 Identities=20% Similarity=0.268 Sum_probs=80.5
Q ss_pred EEEEEEeCCCCCeEEEEeCCCcC---ChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHH-
Q 018008 57 IVAMYVKNPSASLTVLYSHGNAA---DLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEE- 132 (362)
Q Consensus 57 l~~~~~~~~~~~p~vv~lHG~~~---~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~- 132 (362)
+..|.-+.+.++-.|+-+||+|. ++......+..++..+|+.|+.+||.- .++.......++.--++-|+++
T Consensus 385 ~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSL----APEaPFPRaleEv~fAYcW~inn 460 (880)
T KOG4388|consen 385 LELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSL----APEAPFPRALEEVFFAYCWAINN 460 (880)
T ss_pred cccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeecc----CCCCCCCcHHHHHHHHHHHHhcC
Confidence 44444444556678999999984 344556677788888899999999973 3344455667777777888876
Q ss_pred --HhCCCCCcEEEEEEccchHHHHHHHHhC----CC-ccEEEEcCC
Q 018008 133 --TYGVKEEDIILYGQSVGSGPTLELAVRL----PR-LRAVILHSP 171 (362)
Q Consensus 133 --~~~~~~~~i~l~GhS~Gg~ia~~~a~~~----p~-v~~~vl~~p 171 (362)
.+|...++|+++|.|.||.+++..+.+. -+ -+|+++..|
T Consensus 461 ~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 461 CALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred HHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 4677789999999999999877666543 23 588888764
No 179
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.50 E-value=0.0013 Score=60.65 Aligned_cols=90 Identities=19% Similarity=0.255 Sum_probs=65.6
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
+.-.-||+.|-|+- ....+.+...+.+.|+.|+.+|-.-|--+.. .......|+.+.+.+...+.+. ++++|+|+
T Consensus 259 sd~~av~~SGDGGW-r~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r--tPe~~a~Dl~r~i~~y~~~w~~--~~~~liGy 333 (456)
T COG3946 259 SDTVAVFYSGDGGW-RDLDKEVAEALQKQGVPVVGVDSLRYFWSER--TPEQIAADLSRLIRFYARRWGA--KRVLLIGY 333 (456)
T ss_pred cceEEEEEecCCch-hhhhHHHHHHHHHCCCceeeeehhhhhhccC--CHHHHHHHHHHHHHHHHHhhCc--ceEEEEee
Confidence 45567777777663 3445566666689999999999654444432 2345667888888888887776 89999999
Q ss_pred ccchHHHHHHHHhCC
Q 018008 147 SVGSGPTLELAVRLP 161 (362)
Q Consensus 147 S~Gg~ia~~~a~~~p 161 (362)
|+|+-+.-..-.+.|
T Consensus 334 SfGADvlP~~~n~L~ 348 (456)
T COG3946 334 SFGADVLPFAYNRLP 348 (456)
T ss_pred cccchhhHHHHHhCC
Confidence 999988877666655
No 180
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.34 E-value=0.003 Score=60.56 Aligned_cols=126 Identities=14% Similarity=0.207 Sum_probs=75.3
Q ss_pred EEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhchHHHHHHH------------------HHhcCeEEEEEccC-
Q 018008 48 KLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQMCPIFTEL------------------SVHLNVSLMGYDYS- 105 (362)
Q Consensus 48 ~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~~~~~~~l------------------~~~~g~~vi~~D~~- 105 (362)
.+....+..+..|+++.. ..+|+||++.|+++++..+ ..+.+. .-..-.+++.+|.|
T Consensus 17 ~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~Pv 95 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMW-GLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPV 95 (415)
T ss_dssp EECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THH-HHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--ST
T ss_pred ecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecccc-ccccccCceEEeecccccccccccccccccceEEEeecC
Confidence 333446778888888754 4679999999999876543 222211 01123668889966
Q ss_pred CCcCCCCCCCcc------chHHHHHHHHHHHHHHhC-CCCCcEEEEEEccchHHHHHHHHh----C------C-CccEEE
Q 018008 106 GYGHSSGKPSEQ------DTYADIEAAYKCLEETYG-VKEEDIILYGQSVGSGPTLELAVR----L------P-RLRAVI 167 (362)
Q Consensus 106 G~G~s~~~~~~~------~~~~d~~~~i~~l~~~~~-~~~~~i~l~GhS~Gg~ia~~~a~~----~------p-~v~~~v 167 (362)
|.|.|....... ...+++...+..+.+.+. ....+++|.|.|+||..+-.+|.. . + .++|++
T Consensus 96 GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 96 GTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp TSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred ceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 899886443322 223445555555555443 233699999999999988776653 2 1 389999
Q ss_pred EcCCccc
Q 018008 168 LHSPILS 174 (362)
Q Consensus 168 l~~p~~~ 174 (362)
+.+|+++
T Consensus 176 IGng~~d 182 (415)
T PF00450_consen 176 IGNGWID 182 (415)
T ss_dssp EESE-SB
T ss_pred ecCcccc
Confidence 9998775
No 181
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.33 E-value=0.00065 Score=46.24 Aligned_cols=45 Identities=13% Similarity=0.129 Sum_probs=28.6
Q ss_pred CCCCeeEEEEEcCCCCEEEEEEEeCCC-------CCeEEEEeCCCcCChhch
Q 018008 40 QRDDVDVLKLSTKKGNEIVAMYVKNPS-------ASLTVLYSHGNAADLGQM 84 (362)
Q Consensus 40 ~~~~~~~~~i~~~~g~~l~~~~~~~~~-------~~p~vv~lHG~~~~~~~~ 84 (362)
...+.|...+.|.||..+....++.+. .+|+|++.||..+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 346789999999999999887777655 579999999999988776
No 182
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.31 E-value=0.0046 Score=53.85 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=65.7
Q ss_pred EEEeCCCCCeEEEEeCCCc--CChhchHH-HHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCC
Q 018008 60 MYVKNPSASLTVLYSHGNA--ADLGQMCP-IFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGV 136 (362)
Q Consensus 60 ~~~~~~~~~p~vv~lHG~~--~~~~~~~~-~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~ 136 (362)
|...++.+..+|=|+-|.. ......|. ++..| .+.||.|++.=|.- +.-. .......+..+..+++.+.+..++
T Consensus 9 wvl~P~~P~gvihFiGGaf~ga~P~itYr~lLe~L-a~~Gy~ViAtPy~~-tfDH-~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 9 WVLIPPRPKGVIHFIGGAFVGAAPQITYRYLLERL-ADRGYAVIATPYVV-TFDH-QAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred EEEeCCCCCEEEEEcCcceeccCcHHHHHHHHHHH-HhCCcEEEEEecCC-CCcH-HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4445666777888888854 33344444 55555 67799998876641 1000 000011234455666666665554
Q ss_pred CC--CcEEEEEEccchHHHHHHHHhCC-CccEEEEcC
Q 018008 137 KE--EDIILYGQSVGSGPTLELAVRLP-RLRAVILHS 170 (362)
Q Consensus 137 ~~--~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~ 170 (362)
+. -+++-+|||+|+-+-+.+....+ +-++-|+++
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 32 37889999999999998887765 345666665
No 183
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.29 E-value=0.0016 Score=55.58 Aligned_cols=87 Identities=17% Similarity=0.224 Sum_probs=56.0
Q ss_pred CChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHH-HHHHHHHHhCCCCCcEEEEEEccchHHHHHHH
Q 018008 79 ADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEA-AYKCLEETYGVKEEDIILYGQSVGSGPTLELA 157 (362)
Q Consensus 79 ~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~-~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a 157 (362)
++...|..+...+ .. .+.++++|++|++.+.... ..++++.. ....+.+..+ ..+++++|||+||.++..++
T Consensus 10 ~~~~~~~~~~~~l-~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~--~~~~~l~g~s~Gg~~a~~~a 82 (212)
T smart00824 10 SGPHEYARLAAAL-RG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAG--GRPFVLVGHSSGGLLAHAVA 82 (212)
T ss_pred CcHHHHHHHHHhc-CC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcC--CCCeEEEEECHHHHHHHHHH
Confidence 4444555555555 32 5778999999998765322 23333333 3334444433 27899999999999999888
Q ss_pred HhCC----CccEEEEcCCc
Q 018008 158 VRLP----RLRAVILHSPI 172 (362)
Q Consensus 158 ~~~p----~v~~~vl~~p~ 172 (362)
.... .+.+++++++.
T Consensus 83 ~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 83 ARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHhCCCCCcEEEEEccC
Confidence 8632 37888877653
No 184
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.25 E-value=0.0021 Score=55.15 Aligned_cols=79 Identities=22% Similarity=0.325 Sum_probs=50.0
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
....|||+.|||++...+..+.. .....+ ++++||+..- . |. .+ ..| +.|.|+|+
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~--~~~~D~-l~~yDYr~l~-------~-----d~-----~~-~~y----~~i~lvAW 64 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL--PENYDV-LICYDYRDLD-------F-----DF-----DL-SGY----REIYLVAW 64 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC--CCCccE-EEEecCcccc-------c-----cc-----cc-ccC----ceEEEEEE
Confidence 45799999999998644333211 122334 4678998311 1 00 01 222 78999999
Q ss_pred ccchHHHHHHHHhCCCccEEEEcCC
Q 018008 147 SVGSGPTLELAVRLPRLRAVILHSP 171 (362)
Q Consensus 147 S~Gg~ia~~~a~~~p~v~~~vl~~p 171 (362)
|||-.+|..+....| ++..|.+++
T Consensus 65 SmGVw~A~~~l~~~~-~~~aiAING 88 (213)
T PF04301_consen 65 SMGVWAANRVLQGIP-FKRAIAING 88 (213)
T ss_pred eHHHHHHHHHhccCC-cceeEEEEC
Confidence 999999988766544 666666664
No 185
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.19 E-value=0.0011 Score=66.06 Aligned_cols=103 Identities=18% Similarity=0.311 Sum_probs=65.6
Q ss_pred CeEEEEeCCCcCChhc---h-HHHHHHHHHhcCeEEEEEccCC--CcCC-CC--CCCccchHHHHHHHHHHHHH---HhC
Q 018008 68 SLTVLYSHGNAADLGQ---M-CPIFTELSVHLNVSLMGYDYSG--YGHS-SG--KPSEQDTYADIEAAYKCLEE---TYG 135 (362)
Q Consensus 68 ~p~vv~lHG~~~~~~~---~-~~~~~~l~~~~g~~vi~~D~~G--~G~s-~~--~~~~~~~~~d~~~~i~~l~~---~~~ 135 (362)
.|++|++||++...+. + ......++....+.|+.+.||- .|.- .+ .......+.|...+++++.+ .+|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 6999999998753322 1 2222334445578899999883 1211 11 11122344588888888876 467
Q ss_pred CCCCcEEEEEEccchHHHHHHHHhCCC----ccEEEEcCC
Q 018008 136 VKEEDIILYGQSVGSGPTLELAVRLPR----LRAVILHSP 171 (362)
Q Consensus 136 ~~~~~i~l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p 171 (362)
-|+++|.|+|||.||..+..+... |. +..+|.+++
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~S-p~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLS-PHSRGLFHKAISMSG 230 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcC-HhhHHHHHHHHhhcc
Confidence 789999999999999988776653 31 555555543
No 186
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.07 E-value=0.0052 Score=58.34 Aligned_cols=107 Identities=13% Similarity=0.189 Sum_probs=81.4
Q ss_pred CCCeEEEEeCCCcCChhch----HHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc----------cchHHHHHHHHHHHH
Q 018008 66 SASLTVLYSHGNAADLGQM----CPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE----------QDTYADIEAAYKCLE 131 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~----~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~----------~~~~~d~~~~i~~l~ 131 (362)
...|..|+|.|-|.....| ...+..++++.|-.|+.+++|-+|.|.+.... ...+.|++..|+.+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 4678999999977655444 23566777888999999999999998743222 234578888888888
Q ss_pred HHhCCCC-CcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCc
Q 018008 132 ETYGVKE-EDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPI 172 (362)
Q Consensus 132 ~~~~~~~-~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~ 172 (362)
.+++... .+.+.+|-|+-|.++.++=..+|+ +.|.|..+..
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 8887644 499999999999999999999997 6666665543
No 187
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.04 E-value=0.0029 Score=60.15 Aligned_cols=84 Identities=13% Similarity=0.225 Sum_probs=56.2
Q ss_pred chHHHHHHHHHhcCeE------EEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHH
Q 018008 83 QMCPIFTELSVHLNVS------LMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLEL 156 (362)
Q Consensus 83 ~~~~~~~~l~~~~g~~------vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~ 156 (362)
.|..++..| .+.||. ..-+|+|- + .......+..+...|+.+.+.. .++++|+||||||.++..+
T Consensus 66 ~~~~li~~L-~~~GY~~~~~l~~~pYDWR~----~-~~~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENL-EKLGYDRGKDLFAAPYDWRL----S-PAERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHH-HhcCcccCCEEEEEeechhh----c-hhhHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 455566665 677764 22378872 1 1112344566667666665543 3899999999999999998
Q ss_pred HHhCC-------CccEEEEcCCcccc
Q 018008 157 AVRLP-------RLRAVILHSPILSG 175 (362)
Q Consensus 157 a~~~p-------~v~~~vl~~p~~~~ 175 (362)
....+ .|+++|.+++...|
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCC
Confidence 87763 29999999976543
No 188
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.02 E-value=0.00099 Score=57.89 Aligned_cols=199 Identities=14% Similarity=0.156 Sum_probs=105.6
Q ss_pred EEEEeCCCCCeEEEEeCCCcCChhchHH-HHHHHHHhcCeEEEEEccCCCcCCCCCCCccchH---HHH----HHHHHHH
Q 018008 59 AMYVKNPSASLTVLYSHGNAADLGQMCP-IFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTY---ADI----EAAYKCL 130 (362)
Q Consensus 59 ~~~~~~~~~~p~vv~lHG~~~~~~~~~~-~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~---~d~----~~~i~~l 130 (362)
.|+++ .+..++-|.+-|-|... .... .+..-....++..+.+.-|-+|+..++......+ .|+ .+.|...
T Consensus 105 ~~liP-QK~~~KOG~~a~tgdh~-y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~ 182 (371)
T KOG1551|consen 105 AWLIP-QKMADLCLSWALTGDHV-YTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEF 182 (371)
T ss_pred eeecc-cCcCCeeEEEeecCCce-eEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34444 33345555555544432 1111 2222225568888899999999887443222211 222 2333333
Q ss_pred HHHhCCC----CCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCcc------ccc-----hhccc-------------
Q 018008 131 EETYGVK----EEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPIL------SGL-----RVMYP------------- 181 (362)
Q Consensus 131 ~~~~~~~----~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~------~~~-----~~~~~------------- 181 (362)
.+.+.++ -.++.++|-||||.+|......++. |.-+=++++-. ++. ..+..
T Consensus 183 ~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r 262 (371)
T KOG1551|consen 183 VKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSR 262 (371)
T ss_pred HHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhh
Confidence 3333321 1689999999999999999987764 33222222210 110 00000
Q ss_pred ccccccccc-------------------ccccCCCCCCCCC-----EEEEEeCCCCCCCchhHHHHHHHhccCcceEEeC
Q 018008 182 VKRTFWFDI-------------------YKNIDKIPLVECP-----VLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLK 237 (362)
Q Consensus 182 ~~~~~~~~~-------------------~~~~~~~~~i~~P-----~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~ 237 (362)
.....|... .+....+....+| +.++.+++|..+|-.....+.+.+++ +++.+++
T Consensus 263 ~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~e 341 (371)
T KOG1551|consen 263 NPAQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLE 341 (371)
T ss_pred CchhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCC-CEEEEee
Confidence 000001000 0111122222233 57788999999999888888888886 6777777
Q ss_pred CCCcCccccCCCCCcccCCcchhhhccccccccc
Q 018008 238 GGNHCNLELYPENVSEQGSDQQENQRNNTEQKTE 271 (362)
Q Consensus 238 g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~fl~ 271 (362)
+||.....+. .+.|.+.|.+-|.
T Consensus 342 -gGHVsayl~k----------~dlfRR~I~d~L~ 364 (371)
T KOG1551|consen 342 -GGHVSAYLFK----------QDLFRRAIVDGLD 364 (371)
T ss_pred -cCceeeeehh----------chHHHHHHHHHHH
Confidence 4575544433 3567777777664
No 189
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.80 E-value=0.023 Score=47.99 Aligned_cols=103 Identities=17% Similarity=0.254 Sum_probs=62.1
Q ss_pred CCeEEEEeCCCcCC-hhchHH---------------HHHHHHHhcCeEEEEEccCC---CcCCCCCCC--ccchHHHHHH
Q 018008 67 ASLTVLYSHGNAAD-LGQMCP---------------IFTELSVHLNVSLMGYDYSG---YGHSSGKPS--EQDTYADIEA 125 (362)
Q Consensus 67 ~~p~vv~lHG~~~~-~~~~~~---------------~~~~l~~~~g~~vi~~D~~G---~G~s~~~~~--~~~~~~d~~~ 125 (362)
+...+|++||.|-- .++|.. .+.+ +...||-|++.+.-- +-.+...+. ....++-+..
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~r-Av~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKR-AVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHH-HHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 45699999998743 345532 2222 355688888776541 111111111 1122344444
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC---ccEEEEcCCc
Q 018008 126 AYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR---LRAVILHSPI 172 (362)
Q Consensus 126 ~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~---v~~~vl~~p~ 172 (362)
+...+.... ....+.++.||+||...+.+..+.|. |.++.+.+..
T Consensus 179 vw~~~v~pa--~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPA--KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhccc--CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 444444433 34899999999999999999999984 6666665544
No 190
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.69 E-value=0.0084 Score=48.94 Aligned_cols=81 Identities=21% Similarity=0.090 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-----CccEEEEcCCccccchhccccccccccccccccCC
Q 018008 122 DIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-----RLRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDK 196 (362)
Q Consensus 122 d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-----~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (362)
.+...+.....++ +..+++++|||+||.+|..++.... ....++..++...+...... ...
T Consensus 13 ~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~------------~~~ 78 (153)
T cd00741 13 LVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE------------DRL 78 (153)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH------------Hhh
Confidence 3344444444443 3489999999999999999888653 24556666655433211110 001
Q ss_pred CCCCCCCEEEEEeCCCCCCC
Q 018008 197 IPLVECPVLVIHGTEDEVVD 216 (362)
Q Consensus 197 ~~~i~~P~lvi~G~~D~~v~ 216 (362)
.......+..++...|.+..
T Consensus 79 ~~~~~~~~~~i~~~~D~v~~ 98 (153)
T cd00741 79 DPSDALFVDRIVNDNDIVPR 98 (153)
T ss_pred hccCCccEEEEEECCCccCC
Confidence 11223467888888886543
No 191
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.64 E-value=0.0049 Score=54.96 Aligned_cols=106 Identities=14% Similarity=0.048 Sum_probs=47.9
Q ss_pred CCCeEEEEeCCCcCCh---hchHHHHHHHHHh--cCeEEEEEccCCCcCCCCCCCccchH-HHHHHHHHHHHHHhCCCCC
Q 018008 66 SASLTVLYSHGNAADL---GQMCPIFTELSVH--LNVSLMGYDYSGYGHSSGKPSEQDTY-ADIEAAYKCLEETYGVKEE 139 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~---~~~~~~~~~l~~~--~g~~vi~~D~~G~G~s~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~ 139 (362)
.+..+||+.||.|.+. ..+ ..+..+..+ -|..|..++.-.....+...+....+ +.+..+.+.+...-.+. +
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m-~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~ 80 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSM-GSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPELA-N 80 (279)
T ss_dssp TSS--EEEE--TT--S--TTTH-HHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT-T
T ss_pred CCCCcEEEEEcCccccCChhHH-HHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhh-c
Confidence 3456899999998653 122 222233222 27777777663110000000111112 22233333333222122 5
Q ss_pred cEEEEEEccchHHHHHHHHhCC--CccEEEEcCCcc
Q 018008 140 DIILYGQSVGSGPTLELAVRLP--RLRAVILHSPIL 173 (362)
Q Consensus 140 ~i~l~GhS~Gg~ia~~~a~~~p--~v~~~vl~~p~~ 173 (362)
-+.++|+|.||.++=.++.+.+ .|+-+|.+++.-
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 7999999999999999998876 499999987543
No 192
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.59 E-value=0.043 Score=52.64 Aligned_cols=128 Identities=17% Similarity=0.212 Sum_probs=78.3
Q ss_pred EEEEcCCCCEEEEEEEeC---CCCCeEEEEeCCCcCChhchHHHHHHH----HHh-------------cCeEEEEEccC-
Q 018008 47 LKLSTKKGNEIVAMYVKN---PSASLTVLYSHGNAADLGQMCPIFTEL----SVH-------------LNVSLMGYDYS- 105 (362)
Q Consensus 47 ~~i~~~~g~~l~~~~~~~---~~~~p~vv~lHG~~~~~~~~~~~~~~l----~~~-------------~g~~vi~~D~~- 105 (362)
+.+....+..+.+|+++. +..+|+||++-|+++++... ..+.++ ... .--+++-+|.|
T Consensus 49 v~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~Pv 127 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPV 127 (454)
T ss_pred EECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCC
Confidence 344445688899888875 34679999999999886432 332221 000 11346677776
Q ss_pred CCcCCCCCC------CccchHHHHHHHHHHHHHH-hCCCCCcEEEEEEccchHHHHHHHHh---------CC--CccEEE
Q 018008 106 GYGHSSGKP------SEQDTYADIEAAYKCLEET-YGVKEEDIILYGQSVGSGPTLELAVR---------LP--RLRAVI 167 (362)
Q Consensus 106 G~G~s~~~~------~~~~~~~d~~~~i~~l~~~-~~~~~~~i~l~GhS~Gg~ia~~~a~~---------~p--~v~~~v 167 (362)
|.|.|-... .......|.-..+....++ -....++++|.|-|++|...-.+|.. .| +++|++
T Consensus 128 GvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~ 207 (454)
T KOG1282|consen 128 GVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYA 207 (454)
T ss_pred cCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEE
Confidence 566664221 2222334444433333333 23345899999999999777766652 23 489999
Q ss_pred EcCCcccc
Q 018008 168 LHSPILSG 175 (362)
Q Consensus 168 l~~p~~~~ 175 (362)
+-+|+++.
T Consensus 208 IGNg~td~ 215 (454)
T KOG1282|consen 208 IGNGLTDP 215 (454)
T ss_pred ecCcccCc
Confidence 99998763
No 193
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.57 E-value=0.012 Score=54.32 Aligned_cols=202 Identities=9% Similarity=0.016 Sum_probs=116.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
...+||.+=||.+....+......+..+.|+.++-+-.|-+-..............+...+..+.+.++.++.++++--+
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 34356666677666666666666666888998888777754433322222233455667777888887777789999999
Q ss_pred ccchHHHHHHH---H-hC-CC----ccEEEEcCCccc-cc-----hhc-------------------------ccccccc
Q 018008 147 SVGSGPTLELA---V-RL-PR----LRAVILHSPILS-GL-----RVM-------------------------YPVKRTF 186 (362)
Q Consensus 147 S~Gg~ia~~~a---~-~~-p~----v~~~vl~~p~~~-~~-----~~~-------------------------~~~~~~~ 186 (362)
|+||..++... . .. |. +.+++..+.... .. ... ......+
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 196 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEGGAY 196 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeecccchh
Confidence 99998776543 1 22 32 455666542111 00 000 0000000
Q ss_pred ccccc-------------cc-cCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCccccCCCCCc
Q 018008 187 WFDIY-------------KN-IDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCNLELYPENVS 252 (362)
Q Consensus 187 ~~~~~-------------~~-~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~~~~~~~~~H 252 (362)
++... +. .+.-.....+.+.+++..|.++|....+++.+..+.. +.|.....+.+.-|
T Consensus 197 ~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~--------g~~v~s~~~~ds~H 268 (350)
T KOG2521|consen 197 LLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREK--------GVNVKSVKFKDSEH 268 (350)
T ss_pred hhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhc--------CceEEEeeccCccc
Confidence 00000 00 0111122567899999999999999999997776653 23444444444444
Q ss_pred ccCC-cchhhhcccccccccCCCCC
Q 018008 253 EQGS-DQQENQRNNTEQKTEKLRPS 276 (362)
Q Consensus 253 ~~~~-e~~~~~~~~i~~fl~~~~~~ 276 (362)
..+. ..|..+.....+|+......
T Consensus 269 ~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 269 VAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred eeeeccCcHHHHHHHHHHHHhcccc
Confidence 4432 45677888888888765443
No 194
>PLN02606 palmitoyl-protein thioesterase
Probab=96.47 E-value=0.027 Score=50.81 Aligned_cols=101 Identities=13% Similarity=0.070 Sum_probs=57.7
Q ss_pred CCeEEEEeCCCcCC--hhchHHHHHHHHHh-cCeEEEEEccCCCcCCCCCCCc-cchHHHHHHHHHHHHHHhCCCCCcEE
Q 018008 67 ASLTVLYSHGNAAD--LGQMCPIFTELSVH-LNVSLMGYDYSGYGHSSGKPSE-QDTYADIEAAYKCLEETYGVKEEDII 142 (362)
Q Consensus 67 ~~p~vv~lHG~~~~--~~~~~~~~~~l~~~-~g~~vi~~D~~G~G~s~~~~~~-~~~~~d~~~~i~~l~~~~~~~~~~i~ 142 (362)
...+||++||.|.+ ...+... .++... .|+.+..+- .|-+.. .+. ....+++..+.+.+.+.-.+. +-+.
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~-~~~i~~~~~~pg~~v~-ig~~~~---~s~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNL-TQFLINHSGYPGTCVE-IGNGVQ---DSLFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHH-HHHHHhCCCCCeEEEE-ECCCcc---cccccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 34579999999843 3333333 333332 254433333 222221 111 222344555555554422222 4689
Q ss_pred EEEEccchHHHHHHHHhCC---CccEEEEcCCcc
Q 018008 143 LYGQSVGSGPTLELAVRLP---RLRAVILHSPIL 173 (362)
Q Consensus 143 l~GhS~Gg~ia~~~a~~~p---~v~~~vl~~p~~ 173 (362)
++|+|.||.++=.++.+.| .|+.+|.+++.-
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999988865 499999987543
No 195
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.47 E-value=0.027 Score=53.61 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=78.3
Q ss_pred EcCCCCEEEEEEEeCCCCCeEEEEeCCCcCChh-chHHHHHHHHHhcCeEEE-EEccCCCcCCCCCCCccchHHHHHHHH
Q 018008 50 STKKGNEIVAMYVKNPSASLTVLYSHGNAADLG-QMCPIFTELSVHLNVSLM-GYDYSGYGHSSGKPSEQDTYADIEAAY 127 (362)
Q Consensus 50 ~~~~g~~l~~~~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~l~~~~g~~vi-~~D~~G~G~s~~~~~~~~~~~d~~~~i 127 (362)
.+..+..+.+++.++.-..|..|++-|+-..-+ .-+.++ ..+|...+ .-|.|-.|.+- -......-+.+.+.|
T Consensus 271 ~D~~reEi~yYFnPGD~KPPL~VYFSGyR~aEGFEgy~MM----k~Lg~PfLL~~DpRleGGaF-YlGs~eyE~~I~~~I 345 (511)
T TIGR03712 271 VDSKRQEFIYYFNPGDFKPPLNVYFSGYRPAEGFEGYFMM----KRLGAPFLLIGDPRLEGGAF-YLGSDEYEQGIINVI 345 (511)
T ss_pred ecCCCCeeEEecCCcCCCCCeEEeeccCcccCcchhHHHH----HhcCCCeEEeecccccccee-eeCcHHHHHHHHHHH
Confidence 344455555444444446788999999865211 122333 44455433 44777555443 112222345678888
Q ss_pred HHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCCccc
Q 018008 128 KCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSPILS 174 (362)
Q Consensus 128 ~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p~~~ 174 (362)
..-++.+|.+.+.++|-|.|||.+-|+.+++.. +..++|+.-|+..
T Consensus 346 ~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l-~P~AIiVgKPL~N 391 (511)
T TIGR03712 346 QEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL-SPHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHhCCCHHHeeeccccccchhhhhhcccC-CCceEEEcCcccc
Confidence 888889999989999999999999999999876 3578888778764
No 196
>PLN02209 serine carboxypeptidase
Probab=96.46 E-value=0.04 Score=53.01 Aligned_cols=128 Identities=15% Similarity=0.172 Sum_probs=77.1
Q ss_pred EEEEEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhchHHHHHHH----------------------HHhcCeEEE
Q 018008 46 VLKLSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQMCPIFTEL----------------------SVHLNVSLM 100 (362)
Q Consensus 46 ~~~i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~~~~~~~l----------------------~~~~g~~vi 100 (362)
.+.+....+..+..|+++.. ...|+||++-|+++++..+ ..+.+. .-..-.+++
T Consensus 43 y~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 43 YIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 34454445667777777643 4579999999998876432 211110 011124578
Q ss_pred EEcc-CCCcCCCCCCC-----ccchHHHHHHHHHHHHHHhC-CCCCcEEEEEEccchHHHHHHHHh----C-----C--C
Q 018008 101 GYDY-SGYGHSSGKPS-----EQDTYADIEAAYKCLEETYG-VKEEDIILYGQSVGSGPTLELAVR----L-----P--R 162 (362)
Q Consensus 101 ~~D~-~G~G~s~~~~~-----~~~~~~d~~~~i~~l~~~~~-~~~~~i~l~GhS~Gg~ia~~~a~~----~-----p--~ 162 (362)
-+|. .|.|.|-.... .....+++.+.+..+.+.+. ....+++|.|.|+||..+-.+|.. . + +
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 8894 47888753211 11223444455555444432 233689999999999877666542 1 2 3
Q ss_pred ccEEEEcCCccc
Q 018008 163 LRAVILHSPILS 174 (362)
Q Consensus 163 v~~~vl~~p~~~ 174 (362)
++|+++.+|+++
T Consensus 202 l~Gi~igng~td 213 (437)
T PLN02209 202 LQGYVLGNPITH 213 (437)
T ss_pred eeeEEecCcccC
Confidence 789999998765
No 197
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.45 E-value=0.044 Score=52.75 Aligned_cols=125 Identities=14% Similarity=0.125 Sum_probs=75.1
Q ss_pred EEcCCCCEEEEEEEeCC---CCCeEEEEeCCCcCChhchHHHHHH---H-------------------HHhcCeEEEEEc
Q 018008 49 LSTKKGNEIVAMYVKNP---SASLTVLYSHGNAADLGQMCPIFTE---L-------------------SVHLNVSLMGYD 103 (362)
Q Consensus 49 i~~~~g~~l~~~~~~~~---~~~p~vv~lHG~~~~~~~~~~~~~~---l-------------------~~~~g~~vi~~D 103 (362)
+....+..+..|+++.. ...|+||++-|+++++..+ ..+.+ + .-..-.+++.+|
T Consensus 44 v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~-g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD 122 (433)
T PLN03016 44 IGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLD 122 (433)
T ss_pred ecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHH-HHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEec
Confidence 33334566777777643 4579999999998876432 11111 0 011125678899
Q ss_pred c-CCCcCCCCCCCc--cc---hHHHHHHHHHHHHHHhC-CCCCcEEEEEEccchHHHHHHHHh----C-----C--CccE
Q 018008 104 Y-SGYGHSSGKPSE--QD---TYADIEAAYKCLEETYG-VKEEDIILYGQSVGSGPTLELAVR----L-----P--RLRA 165 (362)
Q Consensus 104 ~-~G~G~s~~~~~~--~~---~~~d~~~~i~~l~~~~~-~~~~~i~l~GhS~Gg~ia~~~a~~----~-----p--~v~~ 165 (362)
. .|.|.|...... .. ..+++...+..+.+.+. ....+++|.|.|+||..+-.+|.. . + +++|
T Consensus 123 qPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 123 QPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 4 478888532211 11 22344444444444432 234789999999999877666543 1 2 4889
Q ss_pred EEEcCCccc
Q 018008 166 VILHSPILS 174 (362)
Q Consensus 166 ~vl~~p~~~ 174 (362)
+++.+|+.+
T Consensus 203 i~iGNg~t~ 211 (433)
T PLN03016 203 YMLGNPVTY 211 (433)
T ss_pred eEecCCCcC
Confidence 999998764
No 198
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.42 E-value=0.0066 Score=51.76 Aligned_cols=41 Identities=32% Similarity=0.444 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
.+.|+.++.++.+++++ ++.+++|+|||.|+.+..+++.+.
T Consensus 76 ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 45899999999999986 557999999999999999998764
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.36 E-value=0.0078 Score=48.12 Aligned_cols=51 Identities=25% Similarity=0.360 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC--------CccEEEEcCCcc
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP--------RLRAVILHSPIL 173 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p--------~v~~~vl~~p~~ 173 (362)
+.+.+.+..+.+++. ..++++.|||+||.+|..++.... .+..+..-+|..
T Consensus 48 ~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 48 DQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 455666666666765 379999999999999999887521 255555555544
No 200
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.28 E-value=0.061 Score=47.23 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=60.8
Q ss_pred eEEEEeCCCcCChhc--hHHHHHHHHHhcCeEEEEEccCCCc--CCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEE
Q 018008 69 LTVLYSHGNAADLGQ--MCPIFTELSVHLNVSLMGYDYSGYG--HSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILY 144 (362)
Q Consensus 69 p~vv~lHG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G--~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~ 144 (362)
-++|++||.+..... +......+..--|..|.++|. |-| .+. .....+.+..+.+.+.....+ .+-+.++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~----l~pl~~Qv~~~ce~v~~m~~l-sqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS----LMPLWEQVDVACEKVKQMPEL-SQGYNIV 97 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh----hccHHHHHHHHHHHHhcchhc-cCceEEE
Confidence 578999999976544 444444443444787888876 233 111 112223344444444322111 2678999
Q ss_pred EEccchHHHHHHHHhCC--CccEEEEcCCcc
Q 018008 145 GQSVGSGPTLELAVRLP--RLRAVILHSPIL 173 (362)
Q Consensus 145 GhS~Gg~ia~~~a~~~p--~v~~~vl~~p~~ 173 (362)
|.|.||.++=.++..-+ .|+..|.+++.-
T Consensus 98 g~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999988887655 488888877533
No 201
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.03 E-value=0.064 Score=46.91 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC------CccEEEEcCCcc
Q 018008 122 DIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP------RLRAVILHSPIL 173 (362)
Q Consensus 122 d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p------~v~~~vl~~p~~ 173 (362)
++...+..+++++ +..++++.|||+||.+|..++.... .+..+.+-+|..
T Consensus 113 ~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 113 QVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 3444444444444 3478999999999999998887532 366666666655
No 202
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.00 E-value=0.077 Score=47.98 Aligned_cols=102 Identities=15% Similarity=0.073 Sum_probs=59.2
Q ss_pred CCeEEEEeCCCcCChhc-hHHHHHHHHHh-cCeEEEEEccCCCcCCCCCCCc-cchHHHHHHHHHHHHHHhCCCCCcEEE
Q 018008 67 ASLTVLYSHGNAADLGQ-MCPIFTELSVH-LNVSLMGYDYSGYGHSSGKPSE-QDTYADIEAAYKCLEETYGVKEEDIIL 143 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~-~~~~~~~l~~~-~g~~vi~~D~~G~G~s~~~~~~-~~~~~d~~~~i~~l~~~~~~~~~~i~l 143 (362)
...++|+.||.|.+... -...+.+++.. -|..+.++.. | .+. ..+. ....+++..+.+.+.+.-.+. +-+.+
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g--~~~-~~s~~~~~~~Qve~vce~l~~~~~l~-~G~na 98 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-G--NGV-GDSWLMPLTQQAEIACEKVKQMKELS-QGYNI 98 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-C--CCc-cccceeCHHHHHHHHHHHHhhchhhh-CcEEE
Confidence 44579999999875432 12233333333 2555555543 2 221 1111 122344444444444422222 46899
Q ss_pred EEEccchHHHHHHHHhCC---CccEEEEcCCcc
Q 018008 144 YGQSVGSGPTLELAVRLP---RLRAVILHSPIL 173 (362)
Q Consensus 144 ~GhS~Gg~ia~~~a~~~p---~v~~~vl~~p~~ 173 (362)
+|+|.||.++=.++.+.| .|+.+|.+++.-
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999998888775 399999987543
No 203
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.93 E-value=0.007 Score=45.86 Aligned_cols=42 Identities=21% Similarity=0.325 Sum_probs=35.1
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCN 243 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~ 243 (362)
..|+|++.++.|+++|.+.++.+.+.+.+ ..++.++|.+|..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~ 75 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGV 75 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcce
Confidence 47999999999999999999999999987 4666666666633
No 204
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.73 E-value=0.026 Score=49.18 Aligned_cols=48 Identities=21% Similarity=0.180 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-----CccEEEEcCC
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-----RLRAVILHSP 171 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-----~v~~~vl~~p 171 (362)
..+.+.++.+.+.++ .++++.|||.||.+|..+++..+ +|..++..++
T Consensus 69 ~~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 345555556665554 46999999999999999988743 3777776554
No 205
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.64 E-value=0.035 Score=54.36 Aligned_cols=86 Identities=14% Similarity=0.235 Sum_probs=53.9
Q ss_pred hHHHHHHHHHhcCeE-----EEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHH
Q 018008 84 MCPIFTELSVHLNVS-----LMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 84 ~~~~~~~l~~~~g~~-----vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
|..++..| ...||. ...||+|-.... .......+..+...|+.+.+.-+ .++++|+||||||.+++.+..
T Consensus 158 w~kLIe~L-~~iGY~~~nL~gAPYDWRls~~~--le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 158 WAVLIANL-ARIGYEEKNMYMAAYDWRLSFQN--TEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHH-HHcCCCCCceeecccccccCccc--hhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHHHH
Confidence 34555555 677874 234566621100 01113445667777777665543 379999999999999998766
Q ss_pred hC-----------C-----CccEEEEcCCccc
Q 018008 159 RL-----------P-----RLRAVILHSPILS 174 (362)
Q Consensus 159 ~~-----------p-----~v~~~vl~~p~~~ 174 (362)
.. + .|++.|.+++.+-
T Consensus 233 wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 233 WVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred hccccccccCCcchHHHHHHHHHheecccccC
Confidence 32 1 1789999887554
No 206
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.47 E-value=0.064 Score=45.07 Aligned_cols=101 Identities=22% Similarity=0.188 Sum_probs=54.0
Q ss_pred CeEEEEEccCCCcCCCCCCCccch----HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh--CC-----Ccc
Q 018008 96 NVSLMGYDYSGYGHSSGKPSEQDT----YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR--LP-----RLR 164 (362)
Q Consensus 96 g~~vi~~D~~G~G~s~~~~~~~~~----~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~--~p-----~v~ 164 (362)
.+.+..++||-..... ..... ..++...+......- +..+++|+|+|.||.++..++.. .+ +|.
T Consensus 39 ~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~ 113 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIA 113 (179)
T ss_dssp EEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEE
T ss_pred eeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEE
Confidence 3556667787422111 11222 345555555555554 44799999999999999999887 32 288
Q ss_pred EEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCCCCCC
Q 018008 165 AVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTEDEVVD 216 (362)
Q Consensus 165 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D~~v~ 216 (362)
++++++-....... . .......-.++-++-..|.++.
T Consensus 114 avvlfGdP~~~~~~------~---------~~~~~~~~~~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 114 AVVLFGDPRRGAGQ------P---------GIPGDYSDRVRSYCNPGDPVCD 150 (179)
T ss_dssp EEEEES-TTTBTTT------T---------TBTCSCGGGEEEE-BTT-GGGG
T ss_pred EEEEecCCcccCCc------c---------ccCcccccceeEEcCCCCcccC
Confidence 88887633221000 0 0111122357888888888873
No 207
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.30 E-value=0.37 Score=40.25 Aligned_cols=50 Identities=20% Similarity=0.157 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEEcCC
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVILHSP 171 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl~~p 171 (362)
.++...++-|.... -+..++.++|||+|+.++-..+...+ .++.+|+++.
T Consensus 92 ~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GS 142 (177)
T PF06259_consen 92 PRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECC
Confidence 34555555555444 24579999999999999998887734 5888888764
No 208
>PLN02454 triacylglycerol lipase
Probab=95.23 E-value=0.047 Score=51.47 Aligned_cols=54 Identities=26% Similarity=0.368 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC-------C--CccEEEEcCCccc
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL-------P--RLRAVILHSPILS 174 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~-------p--~v~~~vl~~p~~~ 174 (362)
+++...+..+++.+.-..-+|++.|||+||.+|+.+|... + .|..+.+-+|-+.
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 4566777777777753112499999999999999988542 1 2556666666553
No 209
>PLN02408 phospholipase A1
Probab=94.55 E-value=0.054 Score=50.37 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
+++.+.+..+++.++-...+|++.|||+||.+|+.+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345666777777775323469999999999999998775
No 210
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.54 E-value=0.093 Score=49.83 Aligned_cols=84 Identities=13% Similarity=0.179 Sum_probs=53.3
Q ss_pred chHHHHHHHHHhcCeE------EEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHH
Q 018008 83 QMCPIFTELSVHLNVS------LMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLEL 156 (362)
Q Consensus 83 ~~~~~~~~l~~~~g~~------vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~ 156 (362)
.|..++..+ ...||. -..+|+|-.-... ......+..++..++...+..|- ++++|++|||||.+.+.+
T Consensus 125 ~w~~~i~~l-v~~GYe~~~~l~ga~YDwRls~~~~--e~rd~yl~kLK~~iE~~~~~~G~--kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWHELIENL-VGIGYERGKTLFGAPYDWRLSYHNS--EERDQYLSKLKKKIETMYKLNGG--KKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHH-HhhCcccCceeeccccchhhccCCh--hHHHHHHHHHHHHHHHHHHHcCC--CceEEEecCCccHHHHHH
Confidence 445555554 666775 3457777311111 11123456677777777666654 899999999999999999
Q ss_pred HHhCCC---------ccEEEEcCC
Q 018008 157 AVRLPR---------LRAVILHSP 171 (362)
Q Consensus 157 a~~~p~---------v~~~vl~~p 171 (362)
....+. |+++|.+++
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCc
Confidence 877653 455555553
No 211
>PLN02571 triacylglycerol lipase
Probab=94.11 E-value=0.076 Score=50.15 Aligned_cols=39 Identities=26% Similarity=0.265 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
+++...+..+++.+.-..-+|++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 456666777777764222379999999999999998864
No 212
>PLN02324 triacylglycerol lipase
Probab=93.63 E-value=0.098 Score=49.36 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
+++...+..+++.+.-..-.|.+.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 456666777777775222479999999999999998864
No 213
>PLN00413 triacylglycerol lipase
Probab=93.52 E-value=0.12 Score=49.49 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHH
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
.++...++.+++.+. ..++++.|||+||.+|..++.
T Consensus 268 y~i~~~Lk~ll~~~p--~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNP--TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCC--CCeEEEEecCHHHHHHHHHHH
Confidence 345566677776664 378999999999999998875
No 214
>PLN02162 triacylglycerol lipase
Probab=93.32 E-value=0.13 Score=49.14 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHH
Q 018008 120 YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
+..+...+..+++++. ..++++.|||+||.+|+.+++
T Consensus 261 y~~I~~~L~~lL~k~p--~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNK--NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCC--CceEEEEecChHHHHHHHHHH
Confidence 3445555666565543 368999999999999998765
No 215
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.30 E-value=1.6 Score=42.65 Aligned_cols=81 Identities=22% Similarity=0.284 Sum_probs=56.0
Q ss_pred HhcCeEEEEEccCCCcCCCC--CCCc---cchH--------HHHHHHHHHHHH-HhCCCCCcEEEEEEccchHHHHHHHH
Q 018008 93 VHLNVSLMGYDYSGYGHSSG--KPSE---QDTY--------ADIEAAYKCLEE-TYGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 93 ~~~g~~vi~~D~~G~G~s~~--~~~~---~~~~--------~d~~~~i~~l~~-~~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
...||.++.=|- ||..+.. .... ...+ .+...+-+.|.+ .|+..++.-+..|-|-||-.++..|.
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 567999888775 5544432 1111 1111 223334444443 46777889999999999999999999
Q ss_pred hCCC-ccEEEEcCCccc
Q 018008 159 RLPR-LRAVILHSPILS 174 (362)
Q Consensus 159 ~~p~-v~~~vl~~p~~~ 174 (362)
++|+ ++|+|..+|.+.
T Consensus 135 ryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 135 RYPEDFDGILAGAPAIN 151 (474)
T ss_pred hChhhcCeEEeCCchHH
Confidence 9995 999999999664
No 216
>PLN02934 triacylglycerol lipase
Probab=93.27 E-value=0.13 Score=49.62 Aligned_cols=37 Identities=16% Similarity=0.336 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHH
Q 018008 120 YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
+..+...++.+++++. ..++++.|||+||.+|..++.
T Consensus 304 y~~v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 3456677777777764 379999999999999999875
No 217
>PLN02802 triacylglycerol lipase
Probab=93.27 E-value=0.12 Score=49.74 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 122 DIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 122 d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
++...+..+++.|.-....|++.|||+||.+|+..|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 45556666677664222479999999999999988764
No 218
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=93.25 E-value=0.21 Score=46.75 Aligned_cols=102 Identities=17% Similarity=0.172 Sum_probs=75.8
Q ss_pred eCCCCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccc------hHHHHHHHHHHHHHHhCC
Q 018008 63 KNPSASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQD------TYADIEAAYKCLEETYGV 136 (362)
Q Consensus 63 ~~~~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~------~~~d~~~~i~~l~~~~~~ 136 (362)
.....+|+|++.-|++............++ +-+-+.+.+|-++.|.+.+.... ...|.-+++..++.-|.
T Consensus 58 Hk~~drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~- 133 (448)
T PF05576_consen 58 HKDFDRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP- 133 (448)
T ss_pred EcCCCCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc-
Confidence 344578999999999876544443344443 44558899999999987664433 33677788888877765
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcC
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHS 170 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~ 170 (362)
.+.+--|.|=||+.++..=.-+|+ |++.|.-.
T Consensus 134 --~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 134 --GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred --CCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 688999999999999988888894 99888743
No 219
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.88 E-value=0.29 Score=47.02 Aligned_cols=110 Identities=18% Similarity=0.135 Sum_probs=66.4
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHH---Hh---------------cCeEEEEEc-cCCCcCCCC--CC---CccchHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELS---VH---------------LNVSLMGYD-YSGYGHSSG--KP---SEQDTYAD 122 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~---~~---------------~g~~vi~~D-~~G~G~s~~--~~---~~~~~~~d 122 (362)
.+|+|+++.|+.+++..+-.+. ++- .. ..-.++-+| --|.|.|.. .. .....-+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~-elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLG-ELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhh-hcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 5899999999999875543321 110 00 012356788 457787763 11 11112245
Q ss_pred HHHHHHHHHHH---hCCCCCcEEEEEEccchHHHHHHHHhCC----CccEEEEcCCccccch
Q 018008 123 IEAAYKCLEET---YGVKEEDIILYGQSVGSGPTLELAVRLP----RLRAVILHSPILSGLR 177 (362)
Q Consensus 123 ~~~~i~~l~~~---~~~~~~~i~l~GhS~Gg~ia~~~a~~~p----~v~~~vl~~p~~~~~~ 177 (362)
+....+.+.+. +.-...+.+|+|-|+||.-+..+|...- ..+++|++++++.+..
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 55555544443 3222358999999999999888876543 2678888887765443
No 220
>PLN02753 triacylglycerol lipase
Probab=92.27 E-value=0.2 Score=48.57 Aligned_cols=38 Identities=26% Similarity=0.267 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCC---CCCcEEEEEEccchHHHHHHHH
Q 018008 121 ADIEAAYKCLEETYGV---KEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~---~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
+++...+..+++.+.. ..-+|.+.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4566667777777642 1358999999999999999875
No 221
>PLN02310 triacylglycerol lipase
Probab=92.20 E-value=0.21 Score=47.11 Aligned_cols=39 Identities=23% Similarity=0.250 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCC--CCCcEEEEEEccchHHHHHHHHh
Q 018008 121 ADIEAAYKCLEETYGV--KEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~--~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
+++.+.+..+.+.+.- ...+|.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 4556666777766631 12479999999999999988754
No 222
>PLN02761 lipase class 3 family protein
Probab=92.05 E-value=0.22 Score=48.21 Aligned_cols=39 Identities=33% Similarity=0.396 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhCC----CCCcEEEEEEccchHHHHHHHHh
Q 018008 121 ADIEAAYKCLEETYGV----KEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~----~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
+++...+..+++.++- ..-+|.+.|||+||.+|+..|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 4566777777777631 22479999999999999988753
No 223
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.01 E-value=0.84 Score=42.17 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=51.4
Q ss_pred EEEEEccC-CCcCCCCCCCc-----cchHHHHHHHHHHHHHHhC-CCCCcEEEEEEccchHHHHHHHHh----C-----C
Q 018008 98 SLMGYDYS-GYGHSSGKPSE-----QDTYADIEAAYKCLEETYG-VKEEDIILYGQSVGSGPTLELAVR----L-----P 161 (362)
Q Consensus 98 ~vi~~D~~-G~G~s~~~~~~-----~~~~~d~~~~i~~l~~~~~-~~~~~i~l~GhS~Gg~ia~~~a~~----~-----p 161 (362)
+++.+|.| |.|.|-..... ....+|+..++..+.+.+. ....+++|.|-|+||..+-.+|.. . +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 57889988 88888643211 1122455555555555442 244799999999999877776653 1 2
Q ss_pred --CccEEEEcCCccc
Q 018008 162 --RLRAVILHSPILS 174 (362)
Q Consensus 162 --~v~~~vl~~p~~~ 174 (362)
.++|+++-+|+++
T Consensus 83 ~inLkGi~IGNg~t~ 97 (319)
T PLN02213 83 PINLQGYMLGNPVTY 97 (319)
T ss_pred ceeeeEEEeCCCCCC
Confidence 4889999998775
No 224
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=91.29 E-value=0.48 Score=36.34 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=22.4
Q ss_pred CCCCEEEEEEEeCCC-CCeEEEEeCCCcCChhchHHHH
Q 018008 52 KKGNEIVAMYVKNPS-ASLTVLYSHGNAADLGQMCPIF 88 (362)
Q Consensus 52 ~~g~~l~~~~~~~~~-~~p~vv~lHG~~~~~~~~~~~~ 88 (362)
.+|..++.++..+.+ ...+||++|||.++.-.|...+
T Consensus 75 I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 75 IDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp ETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred EeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 368899988877654 4579999999999977766543
No 225
>PLN02719 triacylglycerol lipase
Probab=91.13 E-value=0.31 Score=47.14 Aligned_cols=39 Identities=28% Similarity=0.343 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhCC---CCCcEEEEEEccchHHHHHHHHh
Q 018008 121 ADIEAAYKCLEETYGV---KEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~---~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
+++...+..+++.|.- ..-+|.+.|||+||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 4566667777777642 12479999999999999998753
No 226
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.00 E-value=0.32 Score=47.09 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCC--CCCcEEEEEEccchHHHHHHHHh
Q 018008 122 DIEAAYKCLEETYGV--KEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 122 d~~~~i~~l~~~~~~--~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
++.+.+..+.+.+.- ..-+|.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345556666665532 12479999999999999988754
No 227
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=90.57 E-value=0.32 Score=44.79 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=74.9
Q ss_pred HHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCC-cccc---chhccccccccc-------------------
Q 018008 131 EETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSP-ILSG---LRVMYPVKRTFW------------------- 187 (362)
Q Consensus 131 ~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p-~~~~---~~~~~~~~~~~~------------------- 187 (362)
++++.| +.+++-|-|--|..++..|...|++.++|...- .+.. +..++..-...|
T Consensus 228 L~q~~I--k~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp 305 (507)
T COG4287 228 LEQVEI--KGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETP 305 (507)
T ss_pred hhheee--eeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCH
Confidence 345666 899999999999999999999999888876432 1110 011111000001
Q ss_pred -----cccccccC-----CCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhccCcceEEeCCCCcCc
Q 018008 188 -----FDIYKNID-----KIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKDKYEPLWLKGGNHCN 243 (362)
Q Consensus 188 -----~~~~~~~~-----~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~~~~i~g~~h~~ 243 (362)
.++.++.. ....+..|-.++.|..|++..+..+.-++..+++.+.+..+++..|..
T Consensus 306 ~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~ 371 (507)
T COG4287 306 LFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL 371 (507)
T ss_pred HHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh
Confidence 01111111 124567899999999999999999999999999987787888877743
No 228
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.41 E-value=1.4 Score=36.20 Aligned_cols=102 Identities=18% Similarity=0.239 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccccchhcc---------ccccccccccc
Q 018008 122 DIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILSGLRVMY---------PVKRTFWFDIY 191 (362)
Q Consensus 122 d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~~~~~~~---------~~~~~~~~~~~ 191 (362)
.-.+.-.+++++. ++ ...++-|-||||+.+..+..++|+ +.++|.+++..+.....- .....+.....
T Consensus 86 rH~AyerYv~eEa-lp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~ 163 (227)
T COG4947 86 RHRAYERYVIEEA-LP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLA 163 (227)
T ss_pred HHHHHHHHHHHhh-cC-CCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCCc
Confidence 3344555666553 23 457788999999999999999997 899999998776432211 11111111111
Q ss_pred cc--cCCCCCCCCCEEEEEeCCCCCCCchhHHHHHHHhcc
Q 018008 192 KN--IDKIPLVECPVLVIHGTEDEVVDFSHGKQLWELCKD 229 (362)
Q Consensus 192 ~~--~~~~~~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~ 229 (362)
++ ++.++ .+-+.+..|..|+..+ ..+.+.+.+.+
T Consensus 164 dp~~l~rlr--~~~~vfc~G~e~~~L~--~~~~L~~~l~d 199 (227)
T COG4947 164 DPFRLERLR--RIDMVFCIGDEDPFLD--NNQHLSRLLSD 199 (227)
T ss_pred ChHHHHHHh--hccEEEEecCcccccc--chHHHHHHhcc
Confidence 10 12222 3346788888888754 45556666654
No 229
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=89.92 E-value=1.4 Score=46.82 Aligned_cols=94 Identities=20% Similarity=0.218 Sum_probs=60.9
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYG 145 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 145 (362)
...|+++|+|..-+... .+..++.+.. .|.+|....+....++++++++.+-.-+++.. +..+.-++|
T Consensus 2121 se~~~~Ffv~pIEG~tt----~l~~la~rle-------~PaYglQ~T~~vP~dSies~A~~yirqirkvQ-P~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT----ALESLASRLE-------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ-PEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchH----HHHHHHhhcC-------CcchhhhccccCCcchHHHHHHHHHHHHHhcC-CCCCeeeec
Confidence 45789999999876543 3444444433 34455444344455667776655433333332 447899999
Q ss_pred EccchHHHHHHHHhCCC---ccEEEEcCC
Q 018008 146 QSVGSGPTLELAVRLPR---LRAVILHSP 171 (362)
Q Consensus 146 hS~Gg~ia~~~a~~~p~---v~~~vl~~p 171 (362)
+|+|+.++..+|....+ ...+|++++
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 99999999999987652 666888764
No 230
>PLN02847 triacylglycerol lipase
Probab=89.89 E-value=0.5 Score=46.52 Aligned_cols=21 Identities=29% Similarity=0.373 Sum_probs=18.9
Q ss_pred CcEEEEEEccchHHHHHHHHh
Q 018008 139 EDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 589999999999999998775
No 231
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=89.31 E-value=4.9 Score=36.57 Aligned_cols=93 Identities=23% Similarity=0.204 Sum_probs=60.4
Q ss_pred CCCeEEEEeCCCcCC----h-hchHHHHHHHHHhcCeEEEEEccCCCcCCCCC-----------CC-----ccchHHHHH
Q 018008 66 SASLTVLYSHGNAAD----L-GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGK-----------PS-----EQDTYADIE 124 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~----~-~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~-----------~~-----~~~~~~d~~ 124 (362)
..+..|+++-|-... . .....+...+....+..++++--+|-|.-.-. .. .......+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 346678888884322 1 22233444443335788788777777653200 00 012235688
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 125 AAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 125 ~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
.++.+|++.|. +++.|+++|+|-|++++-.+|..
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH
Confidence 99999999987 66899999999999999888765
No 232
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.24 E-value=0.66 Score=43.41 Aligned_cols=90 Identities=13% Similarity=0.035 Sum_probs=44.5
Q ss_pred CCCeEEEEeCCCcC-ChhchHHHHHHHHHhc-CeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEE
Q 018008 66 SASLTVLYSHGNAA-DLGQMCPIFTELSVHL-NVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIIL 143 (362)
Q Consensus 66 ~~~p~vv~lHG~~~-~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l 143 (362)
++.-.+|+.||.-+ +...|...+.+..... +..++...+.+.-.....-...-....... +...+..+.+ ++|..
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~-~~e~~~~~si--~kISf 154 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEE-VKETLYDYSI--EKISF 154 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHH-Hhhhhhcccc--ceeee
Confidence 34568999999877 4556666555553332 333333333322111100000001111111 1111222234 89999
Q ss_pred EEEccchHHHHHHHH
Q 018008 144 YGQSVGSGPTLELAV 158 (362)
Q Consensus 144 ~GhS~Gg~ia~~~a~ 158 (362)
+|||+||.++..+..
T Consensus 155 vghSLGGLvar~AIg 169 (405)
T KOG4372|consen 155 VGHSLGGLVARYAIG 169 (405)
T ss_pred eeeecCCeeeeEEEE
Confidence 999999987765544
No 233
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.06 E-value=0.93 Score=40.34 Aligned_cols=50 Identities=26% Similarity=0.397 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCC
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSP 171 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p 171 (362)
.+.+..+.+..+++.|. ..++.|-|||+||.+|..+..... +-.+.+-+|
T Consensus 258 yySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T COG5153 258 YYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 34556666677777764 489999999999999998887653 555555554
No 234
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=89.06 E-value=0.93 Score=40.34 Aligned_cols=50 Identities=26% Similarity=0.397 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCCCccEEEEcCC
Q 018008 119 TYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLPRLRAVILHSP 171 (362)
Q Consensus 119 ~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~v~~~vl~~p 171 (362)
.+.+..+.+..+++.|. ..++.|-|||+||.+|..+..... +-.+.+-+|
T Consensus 258 yySa~ldI~~~v~~~Yp--da~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIYP--DARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhCC--CceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 34556666677777764 489999999999999998887653 555555554
No 235
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=88.31 E-value=2.4 Score=36.93 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=37.2
Q ss_pred CeEEEEEccCCC-cC-C-CCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 96 NVSLMGYDYSGY-GH-S-SGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 96 g~~vi~~D~~G~-G~-s-~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
|+.+..++||.. +- + .+......++++-.+.+...+....-..++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 456677888861 11 0 1122333444444444444333321145899999999999999887664
No 236
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=87.46 E-value=1.9 Score=41.43 Aligned_cols=104 Identities=19% Similarity=0.274 Sum_probs=58.4
Q ss_pred CCCeEEEEeCCCcCChhch---HHHHHHHHHhcCeEEEEEccCC--Cc-----CCCCCCCccchHHHHHHHHHHHHH---
Q 018008 66 SASLTVLYSHGNAADLGQM---CPIFTELSVHLNVSLMGYDYSG--YG-----HSSGKPSEQDTYADIEAAYKCLEE--- 132 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~---~~~~~~l~~~~g~~vi~~D~~G--~G-----~s~~~~~~~~~~~d~~~~i~~l~~--- 132 (362)
.+..++|++-|+|.-.+.- ..--..++....+.|+.++||- +| .....+...+ .-|..-++.++.+
T Consensus 133 ~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG-l~DQqLAl~WV~~Ni~ 211 (601)
T KOG4389|consen 133 YNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG-LLDQQLALQWVQENIA 211 (601)
T ss_pred CCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc-hHHHHHHHHHHHHhHH
Confidence 3445889999987432211 1111224455578888888872 22 1221232233 3345555666665
Q ss_pred HhCCCCCcEEEEEEccchHHHHHHHHhCCC----ccEEEEcCC
Q 018008 133 TYGVKEEDIILYGQSVGSGPTLELAVRLPR----LRAVILHSP 171 (362)
Q Consensus 133 ~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p~----v~~~vl~~p 171 (362)
.+|-++++|.|+|.|+|+.-...-+ ..|. ++..|+-++
T Consensus 212 aFGGnp~~vTLFGESAGaASv~aHL-lsP~S~glF~raIlQSG 253 (601)
T KOG4389|consen 212 AFGGNPSRVTLFGESAGAASVVAHL-LSPGSRGLFHRAILQSG 253 (601)
T ss_pred HhCCCcceEEEeccccchhhhhhee-cCCCchhhHHHHHhhcC
Confidence 5677899999999999986443222 2342 555555443
No 237
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=86.66 E-value=0.92 Score=42.21 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 121 ADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 121 ~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
..+.+.++.+++.+. .-.|.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 567788888888875 3799999999999999988764
No 238
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=86.33 E-value=5.3 Score=36.07 Aligned_cols=40 Identities=30% Similarity=0.431 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 120 YADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 120 ~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
.+.+..++.++.+.+. +..+|.++|+|-||..|=.++...
T Consensus 74 ~~~I~~ay~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYE-PGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHHHHHHHHhccC-CcceEEEEecCccHHHHHHHHHHH
Confidence 3567788888888874 668899999999999998888654
No 239
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=85.10 E-value=2.5 Score=39.29 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=40.2
Q ss_pred CcEEEEEEccchHHHHHHHHhCC-----C-ccEEEEcCCccccchhccccccccccccccccCCCCCCCCCEEEEEeCCC
Q 018008 139 EDIILYGQSVGSGPTLELAVRLP-----R-LRAVILHSPILSGLRVMYPVKRTFWFDIYKNIDKIPLVECPVLVIHGTED 212 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~p-----~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lvi~G~~D 212 (362)
.++.|+|||+|+-+....+.... . |+.+++++...+.- ...|.... ..+.-.+.=++.++|
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~-------~~~W~~~r------~vVsGr~vN~YS~~D 286 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD-------PEEWRKIR------SVVSGRLVNVYSEND 286 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC-------HHHHHHHH------HHccCeEEEEecCcH
Confidence 68999999999999888766543 1 78888887655421 11121111 123446677778888
Q ss_pred CC
Q 018008 213 EV 214 (362)
Q Consensus 213 ~~ 214 (362)
.+
T Consensus 287 ~v 288 (345)
T PF05277_consen 287 WV 288 (345)
T ss_pred HH
Confidence 55
No 240
>PF03283 PAE: Pectinacetylesterase
Probab=83.56 E-value=4.9 Score=37.76 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHH-hCCCCCcEEEEEEccchHHHHHHHH
Q 018008 120 YADIEAAYKCLEET-YGVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 120 ~~d~~~~i~~l~~~-~~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
...+.+++++|+.. ++ +.++++|.|-|+||.-++..+-
T Consensus 137 ~~i~~avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHH
Confidence 35678889999888 43 4589999999999998877543
No 241
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.79 E-value=5 Score=32.69 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=47.5
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
+...||++-|||........++ +.+..-.++++||......- | .+.| ..+-|+.+
T Consensus 10 gd~LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~ldf----------D--------fsAy----~hirlvAw 64 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNLDF----------D--------FSAY----RHIRLVAW 64 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCccc----------c--------hhhh----hhhhhhhh
Confidence 3448999999998765433332 12222235778886321110 1 1122 56779999
Q ss_pred ccchHHHHHHHHhCCCccEEEEcC
Q 018008 147 SVGSGPTLELAVRLPRLRAVILHS 170 (362)
Q Consensus 147 S~Gg~ia~~~a~~~p~v~~~vl~~ 170 (362)
|||-.+|-++....+ ++..+.++
T Consensus 65 SMGVwvAeR~lqg~~-lksatAiN 87 (214)
T COG2830 65 SMGVWVAERVLQGIR-LKSATAIN 87 (214)
T ss_pred hHHHHHHHHHHhhcc-ccceeeec
Confidence 999999999887664 55555555
No 242
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=75.97 E-value=0.94 Score=43.24 Aligned_cols=71 Identities=13% Similarity=0.035 Sum_probs=50.5
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccCcc----eE----------EeCCCCcCccccCCCCCcccCCcchhhhcccc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDKYE----PL----------WLKGGNHCNLELYPENVSEQGSDQQENQRNNT 266 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~----~~----------~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i 266 (362)
.+++|+.+|..|-+++.-..+.+.+.++-... .. .+...++..+..+.++||.+..++|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 48999999999999999999999988753210 00 11222347788899999999999999988888
Q ss_pred ccccc
Q 018008 267 EQKTE 271 (362)
Q Consensus 267 ~~fl~ 271 (362)
..||+
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88874
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.03 E-value=11 Score=37.34 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhCC-CCCcEEEEEEccchHHHHHHHHh
Q 018008 124 EAAYKCLEETYGV-KEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 124 ~~~i~~l~~~~~~-~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
.+.++.+... ++ +..+++.+||||||.++=.+...
T Consensus 511 ~~lleql~~~-~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 511 NELLEQLQAA-GVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHHh-ccCCCCceEEEecccchHHHHHHHHH
Confidence 3444444433 33 46899999999999888766553
No 244
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=75.03 E-value=2.7 Score=38.84 Aligned_cols=71 Identities=8% Similarity=0.033 Sum_probs=53.3
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccC----cceEEeC--------CCC-cCccccCCCCCcccCCcchhhhccccc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDK----YEPLWLK--------GGN-HCNLELYPENVSEQGSDQQENQRNNTE 267 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~----~~~~~i~--------g~~-h~~~~~~~~~~H~~~~e~~~~~~~~i~ 267 (362)
.+++|+..|+.|-+++.-..+.+.+.++-. .++..+. ..+ ...+..+.++||... .+|+.....+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 479999999999999999999999888632 1111111 112 277778889999986 58999889899
Q ss_pred ccccC
Q 018008 268 QKTEK 272 (362)
Q Consensus 268 ~fl~~ 272 (362)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99854
No 245
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=71.33 E-value=26 Score=32.15 Aligned_cols=109 Identities=18% Similarity=0.173 Sum_probs=63.0
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHH--------------HHhcCeEEEEEccC-CCcCCCC--CCCccchHHHHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTEL--------------SVHLNVSLMGYDYS-GYGHSSG--KPSEQDTYADIEAAYKC 129 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l--------------~~~~g~~vi~~D~~-G~G~s~~--~~~~~~~~~d~~~~i~~ 129 (362)
.+|..+.+.|..+.+..-+.-+.++ +.. ..++.+|-| |.|.|-- .........++...+-.
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 4689999999876543322222221 122 234667765 6676642 21112222333333333
Q ss_pred HHHHh-----CCCCCcEEEEEEccchHHHHHHHHhC------C----CccEEEEcCCccccch
Q 018008 130 LEETY-----GVKEEDIILYGQSVGSGPTLELAVRL------P----RLRAVILHSPILSGLR 177 (362)
Q Consensus 130 l~~~~-----~~~~~~i~l~GhS~Gg~ia~~~a~~~------p----~v~~~vl~~p~~~~~~ 177 (362)
+++.+ .....+++++..|+||-++..++... . ++.+++|-.++++..+
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D 170 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPED 170 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhH
Confidence 33321 22346999999999999998887642 1 3788999888887544
No 246
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=69.02 E-value=42 Score=25.08 Aligned_cols=86 Identities=17% Similarity=0.211 Sum_probs=54.1
Q ss_pred hhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHH--HHHHHH
Q 018008 81 LGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGP--TLELAV 158 (362)
Q Consensus 81 ~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~i--a~~~a~ 158 (362)
....+..+.+++...|+-.=.+.++.+|.+.........-+--...+..+++.+. ..+++|+|-|--.=+ -..++.
T Consensus 9 Pwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP--~~kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 9 PWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFP--ERKFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCC--CCcEEEEeeCCCcCHHHHHHHHH
Confidence 3456788888888887765556676665443221111111345567777888774 489999999955433 344677
Q ss_pred hCCC-ccEEEE
Q 018008 159 RLPR-LRAVIL 168 (362)
Q Consensus 159 ~~p~-v~~~vl 168 (362)
.+|+ |.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 7884 777654
No 247
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=66.32 E-value=6.4 Score=38.51 Aligned_cols=69 Identities=13% Similarity=0.137 Sum_probs=45.8
Q ss_pred CCCCCEEEEEeCCCCCCCchhHHHHHHHhccC-----------cceEEeCCCCcCccccCCCCCcccCCcchhhhccccc
Q 018008 199 LVECPVLVIHGTEDEVVDFSHGKQLWELCKDK-----------YEPLWLKGGNHCNLELYPENVSEQGSDQQENQRNNTE 267 (362)
Q Consensus 199 ~i~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~-----------~~~~~i~g~~h~~~~~~~~~~H~~~~e~~~~~~~~i~ 267 (362)
+-.-++++.||..|+++++..+.++++.+... ++++.+||.+|+.--. + ..+-+....+.
T Consensus 351 ~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~----g-----~~~~d~l~aL~ 421 (474)
T PF07519_consen 351 ARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGP----G-----PDPFDALTALV 421 (474)
T ss_pred hcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCC----C-----CCCCCHHHHHH
Confidence 34568999999999999999999988876542 2344556666643211 0 11224557888
Q ss_pred ccccCCCCC
Q 018008 268 QKTEKLRPS 276 (362)
Q Consensus 268 ~fl~~~~~~ 276 (362)
+|.++-.+.
T Consensus 422 ~WVE~G~AP 430 (474)
T PF07519_consen 422 DWVENGKAP 430 (474)
T ss_pred HHHhCCCCC
Confidence 999865544
No 248
>PLN02209 serine carboxypeptidase
Probab=66.29 E-value=6.2 Score=38.14 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=53.9
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccC----cceEEeCC--------CCc-CccccCCCCCcccCCcchhhhccccc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDK----YEPLWLKG--------GNH-CNLELYPENVSEQGSDQQENQRNNTE 267 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~----~~~~~i~g--------~~h-~~~~~~~~~~H~~~~e~~~~~~~~i~ 267 (362)
.+++|+..|+.|-+++.-..+++...++-. .+...+.+ .++ ..+..+.++||... .+|+.....+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 478999999999999999999999888622 22222221 233 67778889999995 69999989999
Q ss_pred ccccC
Q 018008 268 QKTEK 272 (362)
Q Consensus 268 ~fl~~ 272 (362)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 98853
No 249
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=63.80 E-value=25 Score=30.82 Aligned_cols=39 Identities=8% Similarity=0.079 Sum_probs=28.7
Q ss_pred CCeEEEEeCCCc--CChhchHHHHHHHHHhcCeEEEEEccC
Q 018008 67 ASLTVLYSHGNA--ADLGQMCPIFTELSVHLNVSLMGYDYS 105 (362)
Q Consensus 67 ~~p~vv~lHG~~--~~~~~~~~~~~~l~~~~g~~vi~~D~~ 105 (362)
..+.|+|++=.. .+...|...+.+.+...|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 357799998876 345566666777778899988877765
No 250
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=63.67 E-value=8.2 Score=37.28 Aligned_cols=71 Identities=10% Similarity=0.023 Sum_probs=53.5
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccCc----ceEE--------eCC-CCcCccccCCCCCcccCCcchhhhccccc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDKY----EPLW--------LKG-GNHCNLELYPENVSEQGSDQQENQRNNTE 267 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~----~~~~--------i~g-~~h~~~~~~~~~~H~~~~e~~~~~~~~i~ 267 (362)
..++|+..|+.|-+++.-..+.+.+.++-.. ++.. +.. ++...+..+.++||... .+|+.....+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5799999999999999999999998876321 1111 111 12377888889999996 68999889999
Q ss_pred ccccC
Q 018008 268 QKTEK 272 (362)
Q Consensus 268 ~fl~~ 272 (362)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99854
No 251
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=60.74 E-value=8.2 Score=37.35 Aligned_cols=73 Identities=16% Similarity=0.070 Sum_probs=55.2
Q ss_pred CCEEEEEeCCCCCCCchhHHHHHHHhccCcc----eEEeCC---------CCcCccccCCCCCcccCCcchhhhcccccc
Q 018008 202 CPVLVIHGTEDEVVDFSHGKQLWELCKDKYE----PLWLKG---------GNHCNLELYPENVSEQGSDQQENQRNNTEQ 268 (362)
Q Consensus 202 ~P~lvi~G~~D~~v~~~~~~~l~~~~~~~~~----~~~i~g---------~~h~~~~~~~~~~H~~~~e~~~~~~~~i~~ 268 (362)
.+++|..|+.|-++|.-..+.+.+.+.-... +..+.+ -++..+..+.++||....++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7899999999999999999988877763211 111211 122566788899999999999998899999
Q ss_pred cccCCC
Q 018008 269 KTEKLR 274 (362)
Q Consensus 269 fl~~~~ 274 (362)
|+....
T Consensus 444 fl~g~~ 449 (454)
T KOG1282|consen 444 FLNGQP 449 (454)
T ss_pred HHcCCC
Confidence 997543
No 252
>PRK02399 hypothetical protein; Provisional
Probab=54.51 E-value=1.5e+02 Score=28.25 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=56.0
Q ss_pred EEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCC------------Cc----------cchHHHHHHHHH-
Q 018008 72 LYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKP------------SE----------QDTYADIEAAYK- 128 (362)
Q Consensus 72 v~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~------------~~----------~~~~~d~~~~i~- 128 (362)
|++=|-..+...-..++.......|..|+.+|....|.....+ .. ....+-+.+...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 5555666666555666677667889999999985444221110 00 000111222222
Q ss_pred ---HHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEE
Q 018008 129 ---CLEETYGVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVIL 168 (362)
Q Consensus 129 ---~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl 168 (362)
.+.++-.+ .-++-+|-|.|..++.......| .+-.+++
T Consensus 86 ~v~~L~~~g~i--~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 86 FVRELYERGDV--AGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHhcCCc--cEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 22223334 67889999999999999888888 4555544
No 253
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=53.75 E-value=1.5e+02 Score=28.40 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=55.6
Q ss_pred EEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc----------------------cchHHHHH-HHHH
Q 018008 72 LYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE----------------------QDTYADIE-AAYK 128 (362)
Q Consensus 72 v~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~----------------------~~~~~d~~-~~i~ 128 (362)
|++=|-..+...=..++.+.....|+.++.+|.--.+........ ....+-+. .+..
T Consensus 4 I~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 83 (403)
T PF06792_consen 4 IAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAAR 83 (403)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHH
Confidence 344455555555455666666888999999998655544321110 00111111 2222
Q ss_pred HHHHHh---CCCCCcEEEEEEccchHHHHHHHHhCC-CccEEEE
Q 018008 129 CLEETY---GVKEEDIILYGQSVGSGPTLELAVRLP-RLRAVIL 168 (362)
Q Consensus 129 ~l~~~~---~~~~~~i~l~GhS~Gg~ia~~~a~~~p-~v~~~vl 168 (362)
.+.+.+ .+ .-++-+|-|.|..++.......| .+-.+++
T Consensus 84 ~v~~l~~~g~i--~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 84 FVSDLYDEGKI--DGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHhcCCc--cEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 222333 34 56888999999999999988888 4555544
No 254
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=53.57 E-value=49 Score=28.51 Aligned_cols=39 Identities=10% Similarity=0.091 Sum_probs=29.4
Q ss_pred CCeEEEEeCCCcCChhc--hHHHHHHHHHhcCeEEEEEccC
Q 018008 67 ASLTVLYSHGNAADLGQ--MCPIFTELSVHLNVSLMGYDYS 105 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~ 105 (362)
.++.|.|++-.+.+... |.+.....+..+|+.+..+++.
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 36789999988877654 5666777778999988777654
No 255
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=53.32 E-value=71 Score=28.30 Aligned_cols=40 Identities=8% Similarity=0.097 Sum_probs=27.3
Q ss_pred CCCeEEEEeCCCcCChhchHHHHHHHHHhcCeE-EEEEccC
Q 018008 66 SASLTVLYSHGNAADLGQMCPIFTELSVHLNVS-LMGYDYS 105 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~ 105 (362)
+..+-|+++.-.......+.+.+.+.+.++|+. |-.++.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 445788888876666555566677777888984 5556654
No 256
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=52.34 E-value=1.2e+02 Score=28.18 Aligned_cols=87 Identities=14% Similarity=0.153 Sum_probs=54.3
Q ss_pred CcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHH
Q 018008 77 NAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLEL 156 (362)
Q Consensus 77 ~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~ 156 (362)
.|++......-..+.+...|+.|+.+|--|.=+.. .+..+++....+-+.....-.|..+.++--+.-|.-++.-
T Consensus 202 ~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk-----~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~Q 276 (340)
T COG0552 202 EGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNK-----KNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQ 276 (340)
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCc-----hhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHH
Confidence 45554433333334446778888888876643322 3445566665555554443334567777799999888887
Q ss_pred HHhCC---CccEEEE
Q 018008 157 AVRLP---RLRAVIL 168 (362)
Q Consensus 157 a~~~p---~v~~~vl 168 (362)
|.... .++|+|+
T Consensus 277 Ak~F~eav~l~GiIl 291 (340)
T COG0552 277 AKIFNEAVGLDGIIL 291 (340)
T ss_pred HHHHHHhcCCceEEE
Confidence 77654 3888887
No 257
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=49.22 E-value=64 Score=28.35 Aligned_cols=94 Identities=22% Similarity=0.221 Sum_probs=52.0
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCC----CccchHHH---------HHHHHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKP----SEQDTYAD---------IEAAYKCLEET 133 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~----~~~~~~~d---------~~~~i~~l~~~ 133 (362)
..|.+++.||.+........ ....+...++.++..+...+|.+.... .......+ ....+..-...
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLG-YAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred cCceEEeccCccccccCcch-HHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 46889999999988765444 333446668877777653332222110 00000000 00111110111
Q ss_pred hCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 134 YGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 134 ~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
++....+....|+++|+..+..++...+
T Consensus 127 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 127 LGASLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HhhhcCcceEEEEEeeccchHHHhhcch
Confidence 2222368899999999999999888776
No 258
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=47.78 E-value=25 Score=31.77 Aligned_cols=29 Identities=24% Similarity=0.224 Sum_probs=22.5
Q ss_pred HHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 129 CLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 129 ~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
.++...|+ .+-.++|||+|-+.|+.++..
T Consensus 74 ~~l~~~Gi--~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 74 RLWRSWGV--RPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHcCC--cccEEEecCHHHHHHHHHhCC
Confidence 33456788 678999999999998877653
No 259
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=44.68 E-value=66 Score=27.19 Aligned_cols=66 Identities=15% Similarity=0.157 Sum_probs=37.4
Q ss_pred CCeEEEEeCCCcCCh---hchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhC
Q 018008 67 ASLTVLYSHGNAADL---GQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYG 135 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~---~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (362)
..++++++||..... ..-..+...| .+.|..+...-+++.|... .......+.....++++.+.++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L-~~~g~~~~~~~~p~~gH~~--~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNAL-RKAGKPVELLIFPGEGHGF--GNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHH-HHTTSSEEEEEETT-SSST--TSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHH-HhcCCCEEEEEcCcCCCCC--CCchhHHHHHHHHHHHHHHHcC
Confidence 468999999987543 2233444445 6777666666666544322 1122333556666777766654
No 260
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=43.75 E-value=17 Score=33.46 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=23.8
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHh
Q 018008 126 AYKCLEETYGVKEEDIILYGQSVGSGPTLELAVR 159 (362)
Q Consensus 126 ~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~ 159 (362)
++-.+++..|+ .+-+++|||+|=+.|+.++..
T Consensus 73 al~~~l~~~Gi--~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 73 ALARLLRSWGI--KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHHTTH--CESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhhccccc--ccceeeccchhhHHHHHHCCc
Confidence 33344567787 788899999999988876543
No 261
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=43.20 E-value=33 Score=29.06 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=29.5
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhccC----cceEEeCCCCc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKDK----YEPLWLKGGNH 241 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~~----~~~~~i~g~~h 241 (362)
++++|-|-|+.|.+..+.+++.....|.+- +..++.+|+||
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GH 178 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGH 178 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCe
Confidence 467888999999999999888877777642 23334455555
No 262
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=42.67 E-value=1e+02 Score=26.42 Aligned_cols=39 Identities=18% Similarity=0.136 Sum_probs=29.5
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhc-CeEEEEEccC
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHL-NVSLMGYDYS 105 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~ 105 (362)
..+-|+|+.=.......+...+...+.+. |+.+..++..
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~ 69 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLF 69 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEecc
Confidence 45778888887776666777777777888 9988877753
No 263
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=42.29 E-value=34 Score=30.97 Aligned_cols=32 Identities=19% Similarity=-0.097 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 127 YKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 127 i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
+-.+....|+ .+..++|||+|=+.|+.++...
T Consensus 66 l~~~l~~~g~--~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 66 AWRALLALLP--RPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HHHHHHhcCC--CCcEEeecCHHHHHHHHHhCCC
Confidence 3344455677 7889999999998888876543
No 264
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=41.33 E-value=35 Score=28.04 Aligned_cols=35 Identities=29% Similarity=0.149 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
..+++.|.++ ++ ..-.+.|-|+|+.++..++...+
T Consensus 14 ~Gvl~aL~e~-gi--~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 14 VGVAKALRER-GP--LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCC
Confidence 3455666554 56 56789999999999999998755
No 265
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=40.32 E-value=93 Score=28.13 Aligned_cols=72 Identities=19% Similarity=0.373 Sum_probs=46.5
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCC--------cCC---CCCCCc---cchHHHHHHHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGY--------GHS---SGKPSE---QDTYADIEAAYKCLEE 132 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--------G~s---~~~~~~---~~~~~d~~~~i~~l~~ 132 (362)
.-|.|+|.-|.++ .+.++ ...||.|+..||--- |.. .++... ...-+.+.+.++...+
T Consensus 251 ~vPmi~fakG~g~-------~Le~l-~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~ 322 (359)
T KOG2872|consen 251 PVPMILFAKGSGG-------ALEEL-AQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVK 322 (359)
T ss_pred CCceEEEEcCcch-------HHHHH-HhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHH
Confidence 3489999999876 34555 667999999998421 111 011111 1233677888888888
Q ss_pred HhCCCCCcEEEEEEc
Q 018008 133 TYGVKEEDIILYGQS 147 (362)
Q Consensus 133 ~~~~~~~~i~l~GhS 147 (362)
.+| +...|.=+||.
T Consensus 323 ~fG-~~ryI~NLGHG 336 (359)
T KOG2872|consen 323 DFG-KSRYIANLGHG 336 (359)
T ss_pred HhC-ccceEEecCCC
Confidence 888 44567777886
No 266
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.49 E-value=1.9e+02 Score=26.14 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=26.0
Q ss_pred CcEEEEEEccchHHHHHHHHhC----CCccEEEEcCCcc
Q 018008 139 EDIILYGQSVGSGPTLELAVRL----PRLRAVILHSPIL 173 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~----p~v~~~vl~~p~~ 173 (362)
.+++|.|.|+|++-+...-... ..+++++..+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 5799999999998776543322 2489999998754
No 267
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=38.50 E-value=3e+02 Score=24.87 Aligned_cols=96 Identities=16% Similarity=0.227 Sum_probs=52.4
Q ss_pred eCCCcCChhchHHHHHHHHHhcCeEEEEE------ccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEc
Q 018008 74 SHGNAADLGQMCPIFTELSVHLNVSLMGY------DYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQS 147 (362)
Q Consensus 74 lHG~~~~~~~~~~~~~~l~~~~g~~vi~~------D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS 147 (362)
+||.-++... ...+ ...|+.|+++ +.+|||...+.......+.++...+...-.... =..++-|+=
T Consensus 11 v~G~vGn~AA----~f~l-q~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~~~~~~~---~davltGYl 82 (281)
T COG2240 11 VYGSVGNSAA----IFPL-QRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEAIDKLGE---CDAVLTGYL 82 (281)
T ss_pred eecccccHhH----HHHH-HHcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHhcccccc---cCEEEEccC
Confidence 4676666422 2223 6678887765 578888877665555555555555444211111 245677753
Q ss_pred cchHH----HHHHHH-hCCCccEEEEcCCccccch
Q 018008 148 VGSGP----TLELAV-RLPRLRAVILHSPILSGLR 177 (362)
Q Consensus 148 ~Gg~i----a~~~a~-~~p~v~~~vl~~p~~~~~~ 177 (362)
-.+.. +-.+.. +..+-+.+++++|++....
T Consensus 83 gs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 83 GSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred CCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 22222 222221 2234678899999886443
No 268
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=38.29 E-value=41 Score=26.40 Aligned_cols=33 Identities=15% Similarity=0.053 Sum_probs=22.3
Q ss_pred CCCCCeEEEEeCCCcCChhchH-HHHHHHHHhcC
Q 018008 64 NPSASLTVLYSHGNAADLGQMC-PIFTELSVHLN 96 (362)
Q Consensus 64 ~~~~~p~vv~lHG~~~~~~~~~-~~~~~l~~~~g 96 (362)
+...+|.|+-+||+.+....+. .++++.+-..|
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 3457899999999999877664 34444433334
No 269
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=38.22 E-value=40 Score=30.27 Aligned_cols=27 Identities=26% Similarity=0.262 Sum_probs=20.8
Q ss_pred HHhC-CCCCcEEEEEEccchHHHHHHHHhC
Q 018008 132 ETYG-VKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 132 ~~~~-~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
...+ + .+..++|||+|=+.|+.++...
T Consensus 77 ~~~g~i--~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 77 KEQGGL--KPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHcCCC--CCCEEeecCHHHHHHHHHhCCC
Confidence 3445 7 7789999999999888876543
No 270
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.78 E-value=96 Score=30.30 Aligned_cols=86 Identities=16% Similarity=0.276 Sum_probs=56.9
Q ss_pred EEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchH
Q 018008 72 LYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSG 151 (362)
Q Consensus 72 v~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ 151 (362)
+|--|+|.+.........+.+.+.||.|+.+|--|.-... +-+...+..+.+.- .++.|+.+|.-+=|.
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~---------~~lm~~l~k~~~~~--~pd~i~~vgealvg~ 510 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN---------APLMTSLAKLIKVN--KPDLILFVGEALVGN 510 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC---------hhHHHHHHHHHhcC--CCceEEEehhhhhCc
Confidence 4556777776666667777778899999999988754433 12444555555543 457899999887776
Q ss_pred HHHHHHHh-------C--CC-ccEEEE
Q 018008 152 PTLELAVR-------L--PR-LRAVIL 168 (362)
Q Consensus 152 ia~~~a~~-------~--p~-v~~~vl 168 (362)
-++.-+.. + |+ |+++++
T Consensus 511 dsv~q~~~fn~al~~~~~~r~id~~~l 537 (587)
T KOG0781|consen 511 DSVDQLKKFNRALADHSTPRLIDGILL 537 (587)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEE
Confidence 66554332 2 33 788777
No 271
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=36.28 E-value=49 Score=28.94 Aligned_cols=37 Identities=32% Similarity=0.231 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
.-+++.|.++ ++.++...+.|-|+|+.++..++...+
T Consensus 15 ~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 4556666654 554345589999999999999998654
No 272
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=36.20 E-value=1.2e+02 Score=27.86 Aligned_cols=36 Identities=11% Similarity=0.144 Sum_probs=26.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCC
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGY 107 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~ 107 (362)
...++|.+-|+-.+ ...+.|++..||.|..+=+..+
T Consensus 5 ~~~VvvamSgGVDS-----sVaa~Ll~~~g~~v~gv~M~nW 40 (377)
T KOG2805|consen 5 PDRVVVAMSGGVDS-----SVAARLLAARGYNVTGVFMKNW 40 (377)
T ss_pred cceEEEEecCCchH-----HHHHHHHHhcCCCeeEEeeecc
Confidence 45577777777654 3566778889999998877776
No 273
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=35.16 E-value=1.9e+02 Score=24.60 Aligned_cols=87 Identities=11% Similarity=0.124 Sum_probs=47.0
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCC---C--------CCc---cchHHHHHH--HHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSG---K--------PSE---QDTYADIEA--AYKCL 130 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~---~--------~~~---~~~~~d~~~--~i~~l 130 (362)
..+-|+++.=.......+.+.+.+.+.+.|+.+..+...-...... . ... ......+.. .++.+
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i 107 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAI 107 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHH
Confidence 3556777766655555556666677788888776555432100000 0 000 011112222 34445
Q ss_pred HHHhCCCCCcEEEEEEccchHHHHHH
Q 018008 131 EETYGVKEEDIILYGQSVGSGPTLEL 156 (362)
Q Consensus 131 ~~~~~~~~~~i~l~GhS~Gg~ia~~~ 156 (362)
.+.+. +-.+++|.|.|+.+....
T Consensus 108 ~~~~~---~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 108 LKRVA---RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHH---cCCeEEEcCHHHHHhhhc
Confidence 55443 456899999999888875
No 274
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=34.74 E-value=78 Score=22.39 Aligned_cols=43 Identities=14% Similarity=0.301 Sum_probs=30.0
Q ss_pred chHHHHHHHHHHHHHHhCCC-CCcEEEEEEccchHHHHHHHHhC
Q 018008 118 DTYADIEAAYKCLEETYGVK-EEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 118 ~~~~d~~~~i~~l~~~~~~~-~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
.....+.+.++++..+-.++ ++++.++|-|-|=.+|.++++..
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 44567778888888754443 37899999999999998887764
No 275
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=34.44 E-value=57 Score=27.24 Aligned_cols=35 Identities=31% Similarity=0.331 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
..+++.+.++ ++ ..-+++|-|.||.++..++....
T Consensus 15 ~Gvl~~L~e~-~~--~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 15 IGALKALEEA-GI--LKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHHc-CC--CcceEEEECHHHHHHHHHHcCCC
Confidence 3555666543 55 45789999999999999997543
No 276
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.28 E-value=1.1e+02 Score=30.19 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=26.9
Q ss_pred CcEEEEEEccchHHHHHHHHhC---C--C-ccEEEEcCCccc
Q 018008 139 EDIILYGQSVGSGPTLELAVRL---P--R-LRAVILHSPILS 174 (362)
Q Consensus 139 ~~i~l~GhS~Gg~ia~~~a~~~---p--~-v~~~vl~~p~~~ 174 (362)
.||.|+|+|+|+-+.+..+... . . |..+++++....
T Consensus 447 RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 447 RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 7999999999999988655422 1 2 788888875543
No 277
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.04 E-value=56 Score=28.28 Aligned_cols=34 Identities=24% Similarity=0.196 Sum_probs=24.8
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 125 AAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 125 ~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
.+++.|.++ ++ +.-.+.|-|+|+.++..++...+
T Consensus 17 GvL~aL~e~-gi--~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 17 GFLAALLEM-GL--EPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHHc-CC--CceEEEEeCHHHHHHHHHHcCCC
Confidence 445555443 56 45579999999999999997543
No 278
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=32.11 E-value=54 Score=32.69 Aligned_cols=27 Identities=11% Similarity=0.129 Sum_probs=22.8
Q ss_pred HHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 132 ETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 132 ~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
+.+|+ .+-.++|||+|=+.++..|.-.
T Consensus 260 ~~~GI--~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAI--KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCC--CCCEEeecCHHHHHHHHHhCCC
Confidence 57888 7789999999999998887654
No 279
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=31.82 E-value=69 Score=29.44 Aligned_cols=37 Identities=19% Similarity=0.060 Sum_probs=24.8
Q ss_pred HHHHHHHHHhCCCC--CcEEEEEEccchHHHHHHHHhCC
Q 018008 125 AAYKCLEETYGVKE--EDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 125 ~~i~~l~~~~~~~~--~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
.+++.|.+..+.+. .-=.+.|-|+||.+++.++...+
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCC
Confidence 45555655555321 12368999999999999997543
No 280
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=30.26 E-value=1.2e+02 Score=26.25 Aligned_cols=54 Identities=13% Similarity=0.239 Sum_probs=38.4
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCe-EEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHH
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNV-SLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEET 133 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~ 133 (362)
..-+|++.||....+...+..+...+...|| +|+....-| +.++..+++++.+.
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~-------------yP~~d~vi~~l~~~ 191 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEG-------------YPLVDTVIEYLRKN 191 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecC-------------CCcHHHHHHHHHHc
Confidence 4468999999998888888899988899988 555544332 22355666676654
No 281
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=29.99 E-value=5.2e+02 Score=25.09 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=53.2
Q ss_pred cCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHH
Q 018008 78 AADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVGSGPTLELA 157 (362)
Q Consensus 78 ~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a 157 (362)
..+.-.......+.+...+|.|+.+|-.|.-. .-+++-+-+..+.+.. .|..+.++--+|=|.-|...|
T Consensus 164 ~~~Pv~Iak~al~~ak~~~~DvvIvDTAGRl~---------ide~Lm~El~~Ik~~~--~P~E~llVvDam~GQdA~~~A 232 (451)
T COG0541 164 EKDPVEIAKAALEKAKEEGYDVVIVDTAGRLH---------IDEELMDELKEIKEVI--NPDETLLVVDAMIGQDAVNTA 232 (451)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccc---------ccHHHHHHHHHHHhhc--CCCeEEEEEecccchHHHHHH
Confidence 33333333333444466788888888765321 1234555556666654 568899999999999999998
Q ss_pred HhCC---CccEEEEc
Q 018008 158 VRLP---RLRAVILH 169 (362)
Q Consensus 158 ~~~p---~v~~~vl~ 169 (362)
.... .+.++|+.
T Consensus 233 ~aF~e~l~itGvIlT 247 (451)
T COG0541 233 KAFNEALGITGVILT 247 (451)
T ss_pred HHHhhhcCCceEEEE
Confidence 8765 38899883
No 282
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=29.91 E-value=3.6e+02 Score=24.67 Aligned_cols=90 Identities=22% Similarity=0.199 Sum_probs=55.8
Q ss_pred EEEEeCCCcCChhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCc----------------------cchHHHH-HHH
Q 018008 70 TVLYSHGNAADLGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSE----------------------QDTYADI-EAA 126 (362)
Q Consensus 70 ~vv~lHG~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~----------------------~~~~~d~-~~~ 126 (362)
..||+-|-+...++-...+..+....|..++.+|..-.+........ ...+..+ .+.
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 35777888887777677777887888999999997653221111000 0011122 233
Q ss_pred HHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 127 YKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 127 i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
.+++..+-++ .-++-+|-|.|-.+.+-.+...|
T Consensus 83 ~r~l~sR~dV--~gmig~GGsgGT~lit~~m~~LP 115 (401)
T COG5441 83 VRFLSSRGDV--AGMIGMGGSGGTALITPAMRRLP 115 (401)
T ss_pred HHHhhcccch--hheeecCCCcchHhhhhHHHhcC
Confidence 3333334444 56788888988888888888887
No 283
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=29.30 E-value=46 Score=33.30 Aligned_cols=52 Identities=13% Similarity=0.261 Sum_probs=37.1
Q ss_pred CCCEEEEEeCCCCCCCchhHHHHHHHhcc-------CcceEEeCCCCcCcc-ccCCCCCc
Q 018008 201 ECPVLVIHGTEDEVVDFSHGKQLWELCKD-------KYEPLWLKGGNHCNL-ELYPENVS 252 (362)
Q Consensus 201 ~~P~lvi~G~~D~~v~~~~~~~l~~~~~~-------~~~~~~i~g~~h~~~-~~~~~~~H 252 (362)
..|.+++||..|-++|..+.-+-+-.++. ....+.++++.|+.- ..+|+..+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~ 614 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDT 614 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCc
Confidence 67999999999999999876555544432 245667888888764 34666544
No 284
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.60 E-value=69 Score=27.54 Aligned_cols=34 Identities=32% Similarity=0.391 Sum_probs=25.8
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 125 AAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 125 ~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
-+++.|.+. ++ ..-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~-g~--~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEA-GI--EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCc
Confidence 455555544 55 55689999999999999998764
No 285
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=27.99 E-value=82 Score=25.92 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
..+++.+.++ ++ ..-.+.|-|.|+.++..++....
T Consensus 16 ~Gvl~~L~e~-g~--~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 16 IGVLRALEEE-GI--EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHHC-CC--CeeEEEEeCHHHHHHHHHHcCCC
Confidence 3445555544 55 45689999999999999988654
No 286
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=27.51 E-value=78 Score=29.00 Aligned_cols=33 Identities=27% Similarity=0.240 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 125 AAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 125 ~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
.+++.|.++ |+ ..-.++|-|+|+.++..++...
T Consensus 32 GvL~aLee~-gi--~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEA-GI--PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCC
Confidence 445555444 77 5668999999999999999864
No 287
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=27.22 E-value=2.1e+02 Score=29.16 Aligned_cols=67 Identities=9% Similarity=0.102 Sum_probs=40.4
Q ss_pred CCeEEEEeCCCcCChhc--hHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhC
Q 018008 67 ASLTVLYSHGNAADLGQ--MCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYG 135 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~ 135 (362)
-+.++|++||.....-. -...+...+...|+.|-.+-+|+-|..-.. ......-+.+.++++.++++
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chhHHHHHHHHHHHHHHHhc
Confidence 45789999998764322 122333344667887777667654433222 24455667777777777654
No 288
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=27.10 E-value=68 Score=29.48 Aligned_cols=32 Identities=38% Similarity=0.456 Sum_probs=23.1
Q ss_pred HHHHHHHHHh-CCCCCcEEEEEEccchHHHHHHHH
Q 018008 125 AAYKCLEETY-GVKEEDIILYGQSVGSGPTLELAV 158 (362)
Q Consensus 125 ~~i~~l~~~~-~~~~~~i~l~GhS~Gg~ia~~~a~ 158 (362)
..+..+.++. +. ++.++.|||+|=+.|+..+.
T Consensus 72 a~~~~l~~~~~~~--~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 72 AAYRVLAEQGLGV--KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHHHhcCCC--CCceeecccHhHHHHHHHcc
Confidence 3344455544 34 78899999999999887765
No 289
>KOG0835 consensus Cyclin L [General function prediction only]
Probab=26.87 E-value=87 Score=28.78 Aligned_cols=10 Identities=10% Similarity=0.212 Sum_probs=5.2
Q ss_pred HHHHhcCeEE
Q 018008 90 ELSVHLNVSL 99 (362)
Q Consensus 90 ~l~~~~g~~v 99 (362)
+.+..+||.|
T Consensus 127 ~ILr~LGF~~ 136 (367)
T KOG0835|consen 127 RILRELGFDV 136 (367)
T ss_pred HHHHHhCCee
Confidence 3445556654
No 290
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=26.87 E-value=1.8e+02 Score=24.98 Aligned_cols=39 Identities=5% Similarity=0.050 Sum_probs=22.7
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeE-EEEEccC
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVS-LMGYDYS 105 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~ 105 (362)
..+.|+++.-.......+.+.+.+.+.+.|+. +..++..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 34566666665554445555566666777874 4445544
No 291
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=26.61 E-value=68 Score=22.24 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=21.2
Q ss_pred CeEEEEeCCCc-CChhchHHHHHHHHHhcCeEEEEE
Q 018008 68 SLTVLYSHGNA-ADLGQMCPIFTELSVHLNVSLMGY 102 (362)
Q Consensus 68 ~p~vv~lHG~~-~~~~~~~~~~~~l~~~~g~~vi~~ 102 (362)
.|.++++||+. ... ..+..+++.+.|+.++.+
T Consensus 31 ~~~~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGA---DRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHHCCCeeEEe
Confidence 47788999987 443 345556667778766553
No 292
>KOG0094 consensus GTPase Rab6/YPT6/Ryh1, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.69 E-value=2.1e+02 Score=24.51 Aligned_cols=56 Identities=13% Similarity=0.265 Sum_probs=40.6
Q ss_pred hhchHHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 81 LGQMCPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 81 ~~~~~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
.+.|..++..+....-++|+++|.- ..++++....+|+.+...-+-+.-.|.|+|.
T Consensus 81 QERFrslipsY~Rds~vaviVyDit----------~~~Sfe~t~kWi~dv~~e~gs~~viI~LVGn 136 (221)
T KOG0094|consen 81 QERFRSLIPSYIRDSSVAVIVYDIT----------DRNSFENTSKWIEDVRRERGSDDVIIFLVGN 136 (221)
T ss_pred HHHHhhhhhhhccCCeEEEEEEecc----------ccchHHHHHHHHHHHHhccCCCceEEEEEcc
Confidence 3567778888877778999999985 2456788888999988876643234566663
No 293
>PRK10279 hypothetical protein; Provisional
Probab=25.54 E-value=81 Score=28.83 Aligned_cols=34 Identities=26% Similarity=0.225 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
.-+++.|.+ .++ ..-.+.|-|+|+.++..+|...
T Consensus 21 iGVL~aL~E-~gi--~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 21 IGVINALKK-VGI--EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHH-cCC--CcCEEEEEcHHHHHHHHHHcCC
Confidence 345555554 477 5678999999999999998754
No 294
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=24.84 E-value=5.5e+02 Score=23.59 Aligned_cols=102 Identities=12% Similarity=-0.004 Sum_probs=56.2
Q ss_pred CCeEEEEeCCCcCChhch-HHHHHHHHHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 018008 67 ASLTVLYSHGNAADLGQM-CPIFTELSVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYG 145 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~-~~~~~~l~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 145 (362)
+.|.||++-...+..... ......++...++ +..||-.--.-. ........+|....+..++..+| ..+++++
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~~~v--yitDW~dAr~Vp-~~~G~FdldDYIdyvie~~~~~G---p~~hv~a 175 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPYHDV--YITDWVDARMVP-LEAGHFDLDDYIDYVIEMINFLG---PDAHVMA 175 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccccce--eEeeccccceee-cccCCccHHHHHHHHHHHHHHhC---CCCcEEE
Confidence 456777777666654333 4455666666555 557765321111 11112345566666666666666 3467777
Q ss_pred EccchHHHHH-----HHHhCCC-ccEEEEcCCccc
Q 018008 146 QSVGSGPTLE-----LAVRLPR-LRAVILHSPILS 174 (362)
Q Consensus 146 hS~Gg~ia~~-----~a~~~p~-v~~~vl~~p~~~ 174 (362)
.+.-+...+. .+...|. -..++++++.++
T Consensus 176 VCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 176 VCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred EecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 7766554443 3334553 677888776543
No 295
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=24.03 E-value=4.1e+02 Score=22.52 Aligned_cols=66 Identities=15% Similarity=0.087 Sum_probs=42.3
Q ss_pred HhcCe-EEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEcc----chHHHHHHHHhCC--CccE
Q 018008 93 VHLNV-SLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSV----GSGPTLELAVRLP--RLRA 165 (362)
Q Consensus 93 ~~~g~-~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~----Gg~ia~~~a~~~p--~v~~ 165 (362)
..+|. .|+..+.+... .+..+.+..++..+.++.+ ..++|+|+|. |..++.++|++.. -+..
T Consensus 73 ~~~G~d~V~~~~~~~~~--------~~~~e~~a~al~~~i~~~~---p~lVL~~~t~~~~~grdlaprlAarLga~lvsd 141 (202)
T cd01714 73 LAMGADRAILVSDRAFA--------GADTLATAKALAAAIKKIG---VDLILTGKQSIDGDTGQVGPLLAELLGWPQITY 141 (202)
T ss_pred HHcCCCEEEEEeccccc--------CCChHHHHHHHHHHHHHhC---CCEEEEcCCcccCCcCcHHHHHHHHhCCCccce
Confidence 34576 45666654321 2344566667777766654 4789999998 8899999998865 2444
Q ss_pred EEEc
Q 018008 166 VILH 169 (362)
Q Consensus 166 ~vl~ 169 (362)
++-+
T Consensus 142 v~~l 145 (202)
T cd01714 142 VSKI 145 (202)
T ss_pred EEEE
Confidence 4443
No 296
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=22.87 E-value=1e+02 Score=27.66 Aligned_cols=34 Identities=24% Similarity=0.090 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRL 160 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~ 160 (362)
.-+++.+. +.++ ..-.+.|-|+|+.++..+|...
T Consensus 26 iGVL~aLe-E~gi--~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 26 IGILQALE-EAGI--PIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHH-HcCC--CccEEEEECHHHHHHHHHHcCC
Confidence 34555554 4577 5567999999999999999864
No 297
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=22.55 E-value=1.7e+02 Score=23.92 Aligned_cols=38 Identities=16% Similarity=0.158 Sum_probs=21.6
Q ss_pred CCCcEEEEEEccchHHHHHHHHhCCC-ccEEEEcCCccc
Q 018008 137 KEEDIILYGQSVGSGPTLELAVRLPR-LRAVILHSPILS 174 (362)
Q Consensus 137 ~~~~i~l~GhS~Gg~ia~~~a~~~p~-v~~~vl~~p~~~ 174 (362)
..++|+++|-|..|...+.++...++ |..++=.+|.-.
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~K~ 105 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPLKQ 105 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TTTS--EEES-GGGT
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChhhc
Confidence 44789999999999988888877665 788877776543
No 298
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=21.48 E-value=3.1e+02 Score=20.59 Aligned_cols=76 Identities=22% Similarity=0.338 Sum_probs=44.1
Q ss_pred CCeEEEEeCCCcCChhchHHHHHHHHHhcCeE--EEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEE
Q 018008 67 ASLTVLYSHGNAADLGQMCPIFTELSVHLNVS--LMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILY 144 (362)
Q Consensus 67 ~~p~vv~lHG~~~~~~~~~~~~~~l~~~~g~~--vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~ 144 (362)
..|+|||.--+.. |...+..++...+.. |+-+|-..+| .++..++..+.-+-.+ ..+.+-
T Consensus 13 ~~~VVifSKs~C~----~c~~~k~ll~~~~v~~~vvELD~~~~g------------~eiq~~l~~~tg~~tv--P~vFI~ 74 (104)
T KOG1752|consen 13 ENPVVIFSKSSCP----YCHRAKELLSDLGVNPKVVELDEDEDG------------SEIQKALKKLTGQRTV--PNVFIG 74 (104)
T ss_pred cCCEEEEECCcCc----hHHHHHHHHHhCCCCCEEEEccCCCCc------------HHHHHHHHHhcCCCCC--CEEEEC
Confidence 4678888773322 333466666666644 4444433111 1455555555433344 678899
Q ss_pred EEccchHHHHHHHHhC
Q 018008 145 GQSVGSGPTLELAVRL 160 (362)
Q Consensus 145 GhS~Gg~ia~~~a~~~ 160 (362)
|.+.||.--+......
T Consensus 75 Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 75 GKFIGGASDLMALHKS 90 (104)
T ss_pred CEEEcCHHHHHHHHHc
Confidence 9999998766655443
No 299
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=21.46 E-value=5e+02 Score=21.93 Aligned_cols=39 Identities=10% Similarity=0.021 Sum_probs=29.0
Q ss_pred CCCeEEEEeCCCcCCh-hchHHHHHHHHHhcCeEEEEEcc
Q 018008 66 SASLTVLYSHGNAADL-GQMCPIFTELSVHLNVSLMGYDY 104 (362)
Q Consensus 66 ~~~p~vv~lHG~~~~~-~~~~~~~~~l~~~~g~~vi~~D~ 104 (362)
+.++.+|++-|..++. ......+.+.+...|+.++..|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 3568999999987655 44455666666788999999873
No 300
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=21.26 E-value=1.5e+02 Score=23.77 Aligned_cols=21 Identities=19% Similarity=0.151 Sum_probs=12.9
Q ss_pred HHHHHHHHHhcCeEEEEEccC
Q 018008 85 CPIFTELSVHLNVSLMGYDYS 105 (362)
Q Consensus 85 ~~~~~~l~~~~g~~vi~~D~~ 105 (362)
...+.+.+.++|+.+..+|..
T Consensus 2 ~~~~~~~f~~~g~~v~~l~~~ 22 (154)
T PF03575_consen 2 VEKFRKAFRKLGFEVDQLDLS 22 (154)
T ss_dssp HHHHHHHHHHCT-EEEECCCT
T ss_pred HHHHHHHHHHCCCEEEEEecc
Confidence 344555567788887777765
No 301
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=21.14 E-value=5.5e+02 Score=24.56 Aligned_cols=59 Identities=17% Similarity=0.192 Sum_probs=29.6
Q ss_pred hHHHHHHHHHhcCeEEEEEccCCC---cCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 84 MCPIFTELSVHLNVSLMGYDYSGY---GHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 84 ~~~~~~~l~~~~g~~vi~~D~~G~---G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
..+.+..| .+.|+.++-+. +|+ |+.. ....-..+++...+...+....+.++++.+.|-
T Consensus 135 ~~~Nl~~L-~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~~~l~gk~vlITgG 196 (399)
T PRK05579 135 TQRNLATL-RSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSPKDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHH-HHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhhcccCCCEEEEeCC
Confidence 35566666 66799876543 232 2221 111223345544444444333344567777776
No 302
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=21.09 E-value=2.8e+02 Score=22.88 Aligned_cols=53 Identities=13% Similarity=0.246 Sum_probs=39.4
Q ss_pred HHhcCeEEEEEccCCCcCCCCCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEEccc
Q 018008 92 SVHLNVSLMGYDYSGYGHSSGKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQSVG 149 (362)
Q Consensus 92 ~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~GhS~G 149 (362)
+.+.|+..+.+|.-+.=. .+.......++.+.++.+.+.++. +++.++-.|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~---~~~~~~i~~~~~~~~~~l~~~~~~--~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLT---PPYEDEIPPEYAEWLNELKKQFGK--DRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCC---CCCcCcCCHHHHHHHHHHHHHCCC--CeEEEEECCCC
Confidence 478899999999875311 223334456788889999988864 68999999986
No 303
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=20.94 E-value=5.7e+02 Score=22.36 Aligned_cols=72 Identities=14% Similarity=0.193 Sum_probs=43.7
Q ss_pred EEeCCCcCChhchHHHHHHHHHh-cCeEEEEEccCCCcCCC-CCCCccchHHHHHHHHHHHHHHhCCCCCcEEEEEE
Q 018008 72 LYSHGNAADLGQMCPIFTELSVH-LNVSLMGYDYSGYGHSS-GKPSEQDTYADIEAAYKCLEETYGVKEEDIILYGQ 146 (362)
Q Consensus 72 v~lHG~~~~~~~~~~~~~~l~~~-~g~~vi~~D~~G~G~s~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~Gh 146 (362)
++..-...+.......+..+... .++.++.+||-+.=... ........+.++...++.+.+++++ +|+++.+
T Consensus 105 ~i~~~~~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i---~vi~~sQ 178 (259)
T PF03796_consen 105 YIEDTPSLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNI---PVIALSQ 178 (259)
T ss_dssp EEEESSS-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTS---EEEEEEE
T ss_pred EEECCCCCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCC---eEEEccc
Confidence 33333344555666666666555 78899999998653332 2222334566777888888888876 4554443
No 304
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=20.86 E-value=94 Score=29.95 Aligned_cols=35 Identities=26% Similarity=0.178 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
.-+++.+.++ ++ .+-++.|-|+|+.++..++...+
T Consensus 89 iGVLkaL~E~-gl--~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 89 IGVLKALFEA-NL--LPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCH
Confidence 3556666554 55 34579999999999999988544
No 305
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=20.84 E-value=69 Score=26.13 Aligned_cols=50 Identities=18% Similarity=0.325 Sum_probs=29.0
Q ss_pred EccCCCcCCCCCC--CccchHHHHHHHH----HHHHHHhCC--CCCcEEEEEEccchH
Q 018008 102 YDYSGYGHSSGKP--SEQDTYADIEAAY----KCLEETYGV--KEEDIILYGQSVGSG 151 (362)
Q Consensus 102 ~D~~G~G~s~~~~--~~~~~~~d~~~~i----~~l~~~~~~--~~~~i~l~GhS~Gg~ 151 (362)
+-+-|||...... -.....+.+...+ ..+.+.+++ .+++|.|+|=|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 4455777662111 1233556777777 777777754 578999999999887
No 306
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=20.23 E-value=1.5e+02 Score=26.09 Aligned_cols=37 Identities=22% Similarity=0.151 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
.-+++.|.++.. ....-.+.|-|+|+.++..++...+
T Consensus 16 ~GVl~aL~e~g~-~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 16 VGVAVCLKKYAP-HLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHHHhCc-ccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 345666666531 1012239999999999999988654
No 307
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.09 E-value=1.3e+02 Score=26.68 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccchHHHHHHHHhCC
Q 018008 124 EAAYKCLEETYGVKEEDIILYGQSVGSGPTLELAVRLP 161 (362)
Q Consensus 124 ~~~i~~l~~~~~~~~~~i~l~GhS~Gg~ia~~~a~~~p 161 (362)
..+++.+.+. ++. ..-.++|-|.||.++..+++...
T Consensus 14 ~Gvl~al~e~-~~~-~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 14 AGVLDAFLEA-GIR-PFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHHc-CCC-CCCEEEEECHHHHhHHHHHhCCc
Confidence 3455555554 442 14479999999999999988654
Done!