Citrus Sinensis ID: 018013

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360--
Protein Sequence
MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG
Secondary Structure (PSIPRED)
cccHHHHHHHHHHcccEEHHHHHHHHHHHccccccccEEEEEEcccccccccccHHHHHEEcccccccccccccccccccccccHHccEEEEEcccccccccEEEEEEcccccccccEEEEEEEEEEccHHHHHHHccccccccccccccccccccccEEEEEEEEcccccccccccEEEEccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccccEEEccccccHHHHHHHHccccccEEEEcccHHHHHHHHHHHccccEEEEEEEcccccccccccccccccHHHHHHHcccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHcccccHHHHHHHHHHHHccccccccEEEEccccccccccccccHHHHcccccccccccccccccccccccccHcEEEEEEccccccccHEEEEccccccccccccEEEEEEEEEccHHHHHHHccccccccccccccccccccccEEEEEEEEcccccccccccEEEEEcccccEEEEEEccHccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHHHHcccccEEEEccccHHHHHHHHHHHcccccEEEEEEcccccccccccHHHcccccEEEEEEEEEEEcccc
Coil and Loop (DISEMBL)
MGLKVASKFIDLMGGFVPMEMVVKGAFELItdeskagsclwitnrrgmeywptseEKAKYLVRSsgsmkrsssqvplnlnvqlpESFEKLVVHTLNHnfrdatikvraplrlpikpnhVLVKIIFAGVnasdvnfssgryfsdgndigsrlpfdagFEAVGLIAAVgdsvnnvkvgtpaaimtfgsyaeftmvpskhilpvarpdpEVVAMLTSGLTASIAleqagpasgkKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISqyqgehgwqpsnypglCEKILAKSQTVVCIHG
Flexible Loop (DISEMBL)
MGLKVASKFIDLMGGFVPMEMVVKGAFELItdeskagsclwitnrrgmeywptsEEKAKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEdiktvfkeefpKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG
Low Complexity Region (SEG)
MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRssgsmkrsssQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG
Disordered region (IsUnstruct)
****VASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPT************************NLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI**
Disordered Region (DISOPRED)
******S****LMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSE*****************************ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG
Disordered Region (DISEMBL)
MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYL***************LNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG
Disordered Region (DISPRO)
****VASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVR************PLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	362	2.2.26 [Sep-21-2011]
Q8BGC4	377	Zinc-binding alcohol dehy	yes	no	0.743	0.713	0.482	2e-62
Q24K16	377	Zinc-binding alcohol dehy	yes	no	0.743	0.713	0.492	3e-62
Q8N4Q0	377	Zinc-binding alcohol dehy	yes	no	0.743	0.713	0.492	5e-62
P42865	340	Probable quinone oxidored	N/A	no	0.676	0.720	0.448	2e-52
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.325	0.345	0.438	1e-18
O74489	329	Probable quinone oxidored	yes	no	0.569	0.626	0.348	2e-18
Q39172	345	NADP-dependent alkenal do	no	no	0.337	0.353	0.432	3e-18
Q39173	343	NADP-dependent alkenal do	no	no	0.337	0.355	0.424	9e-18
O34812	339	Putative NADP-dependent o	yes	no	0.662	0.707	0.307	2e-16
P43903	325	Quinone oxidoreductase OS	no	no	0.577	0.643	0.316	2e-16

>sp|Q8BGC4|ZADH2_MOUSE Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/278 (48%), Positives = 181/278 (65%), Gaps = 9/278 (3%)

Query: 83  LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
           +P + +KLVV  L+ NF +A T++   P+ LP     +LV+  F G+NASD+N+S+GRY 
Sbjct: 29  IPRTMQKLVVTRLSPNFHEAVTLRRDCPVPLP-GDGDLLVRNRFVGINASDINYSAGRY- 86

Query: 142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
               D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+   +P
Sbjct: 87  ----DPSLKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIAIP 142

Query: 201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
           +    PE + ML SG TA ++LE+ G  S GKKVLVTAAAGGTGQFAVQL+K+A   V+ 
Sbjct: 143 MPSVKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIG 202

Query: 260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
           TC  + KA  LK +G DR INY+ E ++TV K+E+P+G D++YESVGG MF+L + ALA 
Sbjct: 203 TCSSDEKAAFLKSIGCDRPINYRTEPVETVLKQEYPEGVDVVYESVGGAMFDLAVDALAT 262

Query: 320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
            GRLIVIG IS YQ   G  P     L  K+L KS ++
Sbjct: 263 KGRLIVIGFISGYQSPTGLSPIKAGVLPTKLLKKSASL 300

Mus musculus (taxid: 10090)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q24K16|ZADH2_BOVIN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1

 Score =  239 bits (609), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/278 (49%), Positives = 179/278 (64%), Gaps = 9/278 (3%)

Query: 83  LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
           +P   +KLVV  L+ NFR+A T++   P+ LP     +LV+  F GVNASD+N+S+GRY 
Sbjct: 29  IPSKMQKLVVTRLSPNFREAVTLRRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGRY- 86

Query: 142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV-KVGTPAAIMTFGSYAEFTMVPSKHILP 200
               D   + PFDAGFE VG + A+G S +    VG   A M  GS+AE+T+VP++  +P
Sbjct: 87  ----DPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMAPGSFAEYTVVPARVAIP 142

Query: 201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
           V    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQLAK A   V+ 
Sbjct: 143 VPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIG 202

Query: 260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
           TC    K+  LK +G DR INY  E + TV ++E+P+G D++YESVGG MF+L + ALA 
Sbjct: 203 TCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALAT 262

Query: 320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
            GRLIVIG +S YQ   G  P     L  K+L KS +V
Sbjct: 263 RGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASV 300

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8N4Q0|ZADH2_HUMAN Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1

 Score =  238 bits (607), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 137/278 (49%), Positives = 179/278 (64%), Gaps = 9/278 (3%)

Query: 83  LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
           +P++ +KLVV  L+ NFR+A T+    P+ LP     +LV+  F GVNASD+N+S+GRY 
Sbjct: 29  IPQAMQKLVVTRLSPNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGRY- 86

Query: 142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
               D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+    P
Sbjct: 87  ----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATP 142

Query: 201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
           V    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+QL+K A   V+ 
Sbjct: 143 VPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 202

Query: 260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
           TC  + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + ALA 
Sbjct: 203 TCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALAT 262

Query: 320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
            GRLIVIG IS YQ   G  P     L  K+L KS +V
Sbjct: 263 KGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASV 300

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P42865|QOR_LEIAM Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1

 Score =  206 bits (525), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/252 (44%), Positives = 154/252 (61%), Gaps = 7/252 (2%)

Query: 84  PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSD 143
           P +F+KL V +L+ +FR +T  V A L   +    V V + +AGVNASD+NF++G YF +
Sbjct: 4   PSNFKKLQVVSLSKDFRSSTSVVEAHLPEEVPEGMVRVSVKYAGVNASDLNFTNGSYFKN 63

Query: 144 GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVAR 203
                 + PFD GFEA G +  +G  V NVKVG    +M +G +AEF   P++  +PV  
Sbjct: 64  -----VQPPFDCGFEAAGTVVQIGAGVANVKVGDHVVLMQYGCFAEFLDAPAERCIPVPE 118

Query: 204 PDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATC 261
             PE   +  S LTA++AL + G    G   LVTAAAGGTGQ AVQL K + G TV+ TC
Sbjct: 119 LKPEYSVLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTC 178

Query: 262 GGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYG 321
             E KA+ LK +G D VINYK E +     E  PKG D++YE VGG  FN  ++ +AV+ 
Sbjct: 179 SSEEKAEFLKSIGCDHVINYKTESLDGRLHELCPKGVDVVYECVGGHTFNDAVRHVAVHA 238

Query: 322 RLIVIGMISQYQ 333
           R+++IG IS Y+
Sbjct: 239 RVVIIGSISSYK 250

Leishmania amazonensis (taxid: 5659)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 3/121 (2%)

Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E 272
           G+TA     E   P  G+ V VTAAAG  GQ   Q AK+ G  VV + G + K  LLK +
Sbjct: 137 GMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYVVGSAGSKEKVDLLKNK 196

Query: 273 LGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ 331
            G D   NYK E D  T  K  FP+G DI +++VGG M    +  + V+GR+ V GM+SQ
Sbjct: 197 FGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVINNMRVHGRIAVCGMVSQ 256

Query: 332 Y 332
           Y
Sbjct: 257 Y 257

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 1

>sp|O74489|QOR_SCHPO Probable quinone oxidoreductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zta1 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 15/221 (6%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVK 174
           PN +++K  +AG+N  D    +G Y +        LP+  G EA G++AAVGD V  + K
Sbjct: 29  PNGLVIKNAYAGLNYIDTYLRTGLYTAP-------LPYIPGKEAAGVVAAVGDKVEADFK 81

Query: 175 VGTPAAIMT-FGSYAEFTMVPSKHILPVARPDPEVVA--MLTSGLTASIALEQAGPA-SG 230
           VG     +T FG+YA++T VP+  +  V+   P  +A   L  GLTA   +E+A P  +G
Sbjct: 82  VGDRVVYLTPFGAYAQYTNVPTTLVSKVSEKIPLKIASAALLQGLTAYTLIEEAYPVKTG 141

Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI-KTV 289
             V+V AAAGG G    Q+ +     V+AT     K ++  + G +   +Y  ED+ K V
Sbjct: 142 DTVVVHAAAGGVGLLLCQMLRARNVHVIATASTAAKRRIAIKNGAEIACSY--EDLTKVV 199

Query: 290 FKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
                 KG D  Y+SVG D  +  L AL   G ++  G  S
Sbjct: 200 ADYTNGKGVDAAYDSVGIDTLSSSLDALRNGGTMVSFGNAS 240

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E 272
           G+TA     E   P  G+ V V+AA+G  GQ   QLAK+ G  VV + G + K  LLK +
Sbjct: 140 GMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK 199

Query: 273 LGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ 331
            G D   NYK E D+    K  FP G DI +E+VGG M +  L  + ++GR+ V GMISQ
Sbjct: 200 FGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQ 259

Query: 332 YQGEH 336
           Y  E+
Sbjct: 260 YNLEN 264

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score = 91.3 bits (225), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 3/125 (2%)

Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E 272
           G+TA     E   P  G+ V V+AA+G  GQ   Q AK+ G  VV + G + K  LLK +
Sbjct: 138 GMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTK 197

Query: 273 LGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ 331
            G D   NYK E D+    K  FPKG D+ +E+VGG M +  L  +  +GR+ V GMISQ
Sbjct: 198 FGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQ 257

Query: 332 YQGEH 336
           Y  E+
Sbjct: 258 YNLEN 262

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score = 87.4 bits (215), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 117/263 (44%), Gaps = 23/263 (8%)

Query: 80  NVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGR 139
            +QL    + + VH    +FR  TI V  P     K   VLVK ++  V+     +  GR
Sbjct: 7   QIQLARRPQGIPVH---EDFRFETIPVPEP-----KQGEVLVKTLYVSVDP----YMRGR 54

Query: 140 YFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHIL 199
              D          D      G+IA V    N++K G    ++   S+ EF+ V    + 
Sbjct: 55  -MQDTKSYVEPFALDKALSG-GVIAEVVSDGNHLKKGD--IVIGNLSWQEFSAVSESALR 110

Query: 200 PVARPDPEVVAML----TSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAG 254
            +        A L     +GLTA   L   G P  G+ V+V+ AAG  G    Q+AK+ G
Sbjct: 111 KIDTSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKG 170

Query: 255 NTVVATCGGEHKAQLLK-ELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNL 312
             VV   G + K   LK EL  D  INYK A+DI+   +   P G D+ +++VGG + + 
Sbjct: 171 ARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDA 230

Query: 313 CLKALAVYGRLIVIGMISQYQGE 335
            +  L  + R+ V G IS Y  E
Sbjct: 231 VMNLLNEFARIPVCGAISSYNAE 253

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P43903|QOR_PSEAE Quinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=qor PE=3 SV=2

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 12/221 (5%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  V V+    G+N  D  + SG Y + G      LP   G E  G + AVG  V   KV
Sbjct: 28  PREVRVRNRAIGLNFIDTYYRSGLYPAPG------LPSGLGSEGAGEVEAVGSEVTRFKV 81

Query: 176 GTPAAIMT--FGSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIALEQAGP-ASG 230
           G   A  T   G+Y+E  ++  + +  LP      +  A++  GLT    L Q      G
Sbjct: 82  GDRVAYATGPLGAYSELHVLAEEKLVHLPDGIDFEQAAAVMLKGLTTQYLLRQTYELRGG 141

Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI-KTV 289
           + +L  AAAGG G FA Q AK  G  ++ T     KA+L ++ G    I+Y  E++ + V
Sbjct: 142 ETILFHAAAGGVGLFACQWAKALGVQLIGTVSSPEKARLARQHGAWETIDYSHENVARRV 201

Query: 290 FKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
            +    K   ++Y+SVG D +   L  +A  G L+  G  S
Sbjct: 202 LELTDGKKCPVVYDSVGKDTWETSLDCVAPRGLLVSFGNAS 242

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
225428782	634	PREDICTED: zinc-binding alcohol dehydrog	0.975	0.556	0.789	1e-161
224105531	634	predicted protein [Populus trichocarpa]	0.980	0.559	0.788	1e-161
255555487	634	alcohol dehydrogenase, putative [Ricinus	0.980	0.559	0.802	1e-159
357475423	633	15-hydroxyprostaglandin dehydrogenase [M	0.977	0.559	0.774	1e-158
357475425	472	15-hydroxyprostaglandin dehydrogenase [M	0.977	0.75	0.774	1e-158
357475429	633	15-hydroxyprostaglandin dehydrogenase [M	0.977	0.559	0.768	1e-155
356500045	633	PREDICTED: zinc-binding alcohol dehydrog	0.977	0.559	0.777	1e-154
449526854	441	PREDICTED: zinc-binding alcohol dehydrog	0.969	0.795	0.757	1e-154
449445868	635	PREDICTED: zinc-binding alcohol dehydrog	0.969	0.552	0.757	1e-153
4958922	470	NADPH oxidoreductase homolog [Cicer arie	0.977	0.753	0.768	1e-153

>gi|225428782|ref|XP_002285205.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2 [Vitis vinifera] gi|297741296|emb|CBI32427.3| unnamed protein product [Vitis vinifera]

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 285/361 (78%), Positives = 316/361 (87%), Gaps = 8/361 (2%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           MG  V SKFI LMGG+V MEMVVKGAFELI+DE KAGSCLWITNRRGMEYWPT  E+AKY
Sbjct: 204 MGSSVDSKFIGLMGGYVSMEMVVKGAFELISDERKAGSCLWITNRRGMEYWPTPIEEAKY 263

Query: 61  LVRSSGSMKRSSSQVPL--NLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNH 118
            +     + +S  +VP   +LN+Q+P+SFEK+VVHTL+HNFR AT  VR PLRLPIKP H
Sbjct: 264 RL----PISKSRRKVPFKASLNLQIPQSFEKVVVHTLSHNFRSATSIVRVPLRLPIKPRH 319

Query: 119 VLVKIIFAGVNASDVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGT 177
           VLVKII+AGVNASDVNFSSGRYF  +  D+GSRLPFDAGFEAVG+IAAVGDSVN++K+GT
Sbjct: 320 VLVKIIYAGVNASDVNFSSGRYFGGNDKDLGSRLPFDAGFEAVGIIAAVGDSVNDLKIGT 379

Query: 178 PAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQA-GPASGKKVLVT 236
           PAA+M FGSYAEF MVPSKHILPVARPDPEVVAMLTSGLTASIALE+A    SGK VLVT
Sbjct: 380 PAAVMIFGSYAEFMMVPSKHILPVARPDPEVVAMLTSGLTASIALEKAVQMESGKVVLVT 439

Query: 237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK 296
           AAAGGTGQFAVQLAKLAGNTV+ATCGG+ KA LL++LGVDRVI+YKAEDIKTV K+EFPK
Sbjct: 440 AAAGGTGQFAVQLAKLAGNTVIATCGGKEKAMLLRDLGVDRVIDYKAEDIKTVLKKEFPK 499

Query: 297 GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQT 356
           G DIIYESVGG+MFNLCL ALA YGRL+VIGMISQYQG  GWQPSNY GLCEK+LAKSQT
Sbjct: 500 GVDIIYESVGGEMFNLCLNALATYGRLVVIGMISQYQGARGWQPSNYTGLCEKLLAKSQT 559

Query: 357 V 357
           V
Sbjct: 560 V 560

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105531|ref|XP_002313845.1| predicted protein [Populus trichocarpa] gi|222850253|gb|EEE87800.1| predicted protein [Populus trichocarpa]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 283/359 (78%), Positives = 317/359 (88%), Gaps = 4/359 (1%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           MG K+ SKFID+MGGFVPM+MVVKGAFELI+DESKAGSCLWITNRRGMEYWPT  E+AKY
Sbjct: 204 MGEKIDSKFIDMMGGFVPMKMVVKGAFELISDESKAGSCLWITNRRGMEYWPTPMEEAKY 263

Query: 61  LVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVL 120
           L RSS S +R S Q P+NL  QLP S+EKLVV TL+HNFR+AT  VR PLRLPI  + VL
Sbjct: 264 LARSSNSKRRVSYQAPVNL--QLPLSYEKLVVQTLSHNFRNATRIVRVPLRLPIGSHQVL 321

Query: 121 VKIIFAGVNASDVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA 179
           VK+I+AGVNASDVNFSSGRYFS  N D+ S LPFD GFEAVG+IAAVG+SV ++KVGTPA
Sbjct: 322 VKVIYAGVNASDVNFSSGRYFSGKNQDLTSSLPFDVGFEAVGIIAAVGESVTDLKVGTPA 381

Query: 180 AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA 238
           A+MTFGSY EFT+VP+KHILPV RPDPEVVA+LTSG+TASIALE+ G   SG+ V+VTAA
Sbjct: 382 ALMTFGSYTEFTVVPAKHILPVPRPDPEVVALLTSGMTASIALEKCGQMKSGEAVVVTAA 441

Query: 239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           AGGTGQFAVQLAKLAGNTVVATCGG  KA LLK+LGVDRVI+YKAEDIKTV K+EFPKG 
Sbjct: 442 AGGTGQFAVQLAKLAGNTVVATCGGNEKAILLKQLGVDRVIDYKAEDIKTVLKKEFPKGI 501

Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           DIIYESVGGDMF+LCL ALA++GRLIVIGMISQYQGEHGW P+NY GLCEKILA+SQTV
Sbjct: 502 DIIYESVGGDMFDLCLNALAMHGRLIVIGMISQYQGEHGWTPANYTGLCEKILARSQTV 560

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555487|ref|XP_002518780.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223542161|gb|EEF43705.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 288/359 (80%), Positives = 323/359 (89%), Gaps = 4/359 (1%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           MG KV++KFID+MGGFVPM+MV+KGAFELI++E+ AGSCLWITNRRGME+WPT  E+AKY
Sbjct: 204 MGSKVSAKFIDMMGGFVPMQMVIKGAFELISNENSAGSCLWITNRRGMEFWPTPAEEAKY 263

Query: 61  LVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVL 120
           L+ SSGS KR SS VP+NL  QLP S+EK+VVHTL+HNFR AT  VRAPLRLPI PN VL
Sbjct: 264 LLSSSGSSKRVSSAVPVNL--QLPNSYEKIVVHTLSHNFRSATSIVRAPLRLPIGPNQVL 321

Query: 121 VKIIFAGVNASDVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA 179
           +K+++AGVNASDVNFSSGRYFS  N DI SRLPFDAGFE VG+IAA+G+SV ++KVGTPA
Sbjct: 322 LKVVYAGVNASDVNFSSGRYFSGNNKDIASRLPFDAGFELVGIIAALGESVRDLKVGTPA 381

Query: 180 AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA 238
           AIMTFGSYAEFT+VP+KHILPV R DPEVVAMLTSGLTASIALE+A    SGK VLVTAA
Sbjct: 382 AIMTFGSYAEFTVVPAKHILPVPRLDPEVVAMLTSGLTASIALEKAAQMESGKLVLVTAA 441

Query: 239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           AGGTGQFAVQLAKLAGNTVVATCGG+ KA +LKELGV RVI+YKAE+IKTV K+EFPKG 
Sbjct: 442 AGGTGQFAVQLAKLAGNTVVATCGGKEKAMVLKELGVHRVIDYKAENIKTVLKKEFPKGI 501

Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           DIIYESVGGDMF+LCL ALAV+GRLIVIGMISQYQGEHGW+PSNY GLCEKILAKSQTV
Sbjct: 502 DIIYESVGGDMFDLCLNALAVHGRLIVIGMISQYQGEHGWKPSNYTGLCEKILAKSQTV 560

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475423|ref|XP_003607997.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|355509052|gb|AES90194.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula]

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 278/359 (77%), Positives = 307/359 (85%), Gaps = 5/359 (1%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           MGLKV  + I +MGGFVPM+MVVKGAFELITDESKAG CLWITNRRG+EYWPT  E+AKY
Sbjct: 204 MGLKVDPRLISMMGGFVPMDMVVKGAFELITDESKAGHCLWITNRRGLEYWPTPSEEAKY 263

Query: 61  LVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVL 120
           L R +   ++S  Q P   +++LP+SFEK VVHTL HNFR+AT  VRAPLRLPIKPNHVL
Sbjct: 264 LTRPTRFRRKSEYQAP---SIKLPDSFEKTVVHTLTHNFRNATSIVRAPLRLPIKPNHVL 320

Query: 121 VKIIFAGVNASDVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA 179
           VKII+AGVNASDVNFSSGRYF   N +  +RLPFDAGFEAVG+IAAVGDSV ++KVG P 
Sbjct: 321 VKIIYAGVNASDVNFSSGRYFGGNNKETAARLPFDAGFEAVGIIAAVGDSVTDLKVGMPC 380

Query: 180 AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA 238
           A MTFG YAEFTM+PSK+ LPV RPDPE VAMLTSGLTASIALE+AG   SGK VLVTAA
Sbjct: 381 AFMTFGGYAEFTMIPSKYALPVPRPDPEAVAMLTSGLTASIALEKAGQMESGKVVLVTAA 440

Query: 239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           AGGTGQFAVQLAKLAGNTVVATCGG  KA+LLKELGVDRVI+Y +EDIKTV K+EFPKG 
Sbjct: 441 AGGTGQFAVQLAKLAGNTVVATCGGGAKAKLLKELGVDRVIDYHSEDIKTVLKKEFPKGI 500

Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           DIIYESVGGDM  LCL ALAV+GRLIVIGMISQYQGE GW PS YPGLCEK+L+KSQ V
Sbjct: 501 DIIYESVGGDMLKLCLDALAVHGRLIVIGMISQYQGEKGWTPSKYPGLCEKLLSKSQAV 559

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475425|ref|XP_003607998.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|355509053|gb|AES90195.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula]

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 278/359 (77%), Positives = 307/359 (85%), Gaps = 5/359 (1%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           MGLKV  + I +MGGFVPM+MVVKGAFELITDESKAG CLWITNRRG+EYWPT  E+AKY
Sbjct: 43  MGLKVDPRLISMMGGFVPMDMVVKGAFELITDESKAGHCLWITNRRGLEYWPTPSEEAKY 102

Query: 61  LVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVL 120
           L R +   ++S  Q P   +++LP+SFEK VVHTL HNFR+AT  VRAPLRLPIKPNHVL
Sbjct: 103 LTRPTRFRRKSEYQAP---SIKLPDSFEKTVVHTLTHNFRNATSIVRAPLRLPIKPNHVL 159

Query: 121 VKIIFAGVNASDVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA 179
           VKII+AGVNASDVNFSSGRYF   N +  +RLPFDAGFEAVG+IAAVGDSV ++KVG P 
Sbjct: 160 VKIIYAGVNASDVNFSSGRYFGGNNKETAARLPFDAGFEAVGIIAAVGDSVTDLKVGMPC 219

Query: 180 AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA 238
           A MTFG YAEFTM+PSK+ LPV RPDPE VAMLTSGLTASIALE+AG   SGK VLVTAA
Sbjct: 220 AFMTFGGYAEFTMIPSKYALPVPRPDPEAVAMLTSGLTASIALEKAGQMESGKVVLVTAA 279

Query: 239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           AGGTGQFAVQLAKLAGNTVVATCGG  KA+LLKELGVDRVI+Y +EDIKTV K+EFPKG 
Sbjct: 280 AGGTGQFAVQLAKLAGNTVVATCGGGAKAKLLKELGVDRVIDYHSEDIKTVLKKEFPKGI 339

Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           DIIYESVGGDM  LCL ALAV+GRLIVIGMISQYQGE GW PS YPGLCEK+L+KSQ V
Sbjct: 340 DIIYESVGGDMLKLCLDALAVHGRLIVIGMISQYQGEKGWTPSKYPGLCEKLLSKSQAV 398

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475429|ref|XP_003608000.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|355509055|gb|AES90197.1| 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula]

 Score =  552 bits (1422), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/359 (76%), Positives = 308/359 (85%), Gaps = 5/359 (1%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           +GLKV  KF+ +MGGF+PMEMVVKGAFELITDESKAG CLWI+NRRG+EYWPT  E+AKY
Sbjct: 204 LGLKVDPKFLSMMGGFIPMEMVVKGAFELITDESKAGHCLWISNRRGLEYWPTPSEEAKY 263

Query: 61  LVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVL 120
           LVR     +R+  + P   +++LPESFEK+VV TL HNFR+AT  VRAPLRLP+KPN VL
Sbjct: 264 LVRPRRLRRRAEYKAP---SIKLPESFEKIVVQTLTHNFRNATSIVRAPLRLPVKPNLVL 320

Query: 121 VKIIFAGVNASDVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA 179
           VKII+AGVNASDVNFSSGRYF   N +  +RLPFDAGFEAVG+IAAVGDSV ++KVG P 
Sbjct: 321 VKIIYAGVNASDVNFSSGRYFGGNNKETTARLPFDAGFEAVGIIAAVGDSVTDLKVGMPC 380

Query: 180 AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA 238
           A MTFG YAEFTM+PSK+ LPV RPDPE VAMLTSGLTASIALE+AG   SGK VLVTAA
Sbjct: 381 AFMTFGGYAEFTMIPSKYALPVPRPDPEGVAMLTSGLTASIALEKAGQMESGKVVLVTAA 440

Query: 239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           AGGTGQFAVQLAKLAGNTVVATCGG  KA+LLKELGVDRVI+Y +EDIKTV ++EFPKG 
Sbjct: 441 AGGTGQFAVQLAKLAGNTVVATCGGGTKAKLLKELGVDRVIDYNSEDIKTVLRKEFPKGI 500

Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           DIIYESVGGDM  LCL ALAV+GRLIVIGMISQYQGEHGW PS YPGL EK+LAKSQTV
Sbjct: 501 DIIYESVGGDMLKLCLDALAVHGRLIVIGMISQYQGEHGWTPSKYPGLLEKLLAKSQTV 559

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500045|ref|XP_003518845.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Glycine max]

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 279/359 (77%), Positives = 309/359 (86%), Gaps = 5/359 (1%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           MG K+  K I+L GGFVPMEMVVKGAFELI DESKAG CLWITNR+GMEYWP+  E+AKY
Sbjct: 204 MGNKIDPKIINLSGGFVPMEMVVKGAFELIMDESKAGHCLWITNRQGMEYWPSPSEEAKY 263

Query: 61  LVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVL 120
           L+RSS   +RS  + PL   +++PESFEK+VVHTL HNFR+AT  VR PLRLP+KP HVL
Sbjct: 264 LIRSSRFRRRSDFKAPL---IKIPESFEKIVVHTLTHNFRNATSIVRTPLRLPVKPKHVL 320

Query: 121 VKIIFAGVNASDVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA 179
           VKIIFAGVNASDVNFSSGRYF  + ND+ SRLPFDAGFEAVG+IAAVGDSV ++KVG P 
Sbjct: 321 VKIIFAGVNASDVNFSSGRYFGGNNNDVVSRLPFDAGFEAVGIIAAVGDSVTDLKVGMPC 380

Query: 180 AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA 238
           A MTFG YAEF M+PSKH LPV RPDPEVVAMLTSGLTASIALE+AG   SGK VLVTAA
Sbjct: 381 AFMTFGGYAEFLMIPSKHALPVPRPDPEVVAMLTSGLTASIALEKAGQMESGKVVLVTAA 440

Query: 239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           AGGTGQFAVQLAKLAGNTVVATCGG  KA+LLK+LGV+RVI+Y +ED+KTV +EEFPKG 
Sbjct: 441 AGGTGQFAVQLAKLAGNTVVATCGGGAKAKLLKDLGVNRVIDYHSEDVKTVLREEFPKGI 500

Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           DIIYESVGGDM NLCL ALAV+GRLIVIGMISQYQGE GW PS YPGL EK+LAKSQTV
Sbjct: 501 DIIYESVGGDMLNLCLNALAVHGRLIVIGMISQYQGEKGWTPSKYPGLLEKLLAKSQTV 559

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449526854|ref|XP_004170428.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Cucumis sativus]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 269/355 (75%), Positives = 306/355 (86%), Gaps = 4/355 (1%)

Query: 5   VASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRS 64
           +  +F + +GGFVPMEMV+KG FELI DESKAGSCLWITNRRGMEYWP+S E+AKYL+ S
Sbjct: 15  IGERFAERLGGFVPMEMVIKGTFELINDESKAGSCLWITNRRGMEYWPSSTEEAKYLLPS 74

Query: 65  SGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKII 124
           S   K+SS+       V +P+SFEK++VHTL+HNFR AT  VR+PLRLPI+P+HVLVKI+
Sbjct: 75  SRLGKQSST--AFFQKVDIPQSFEKVIVHTLSHNFRGATSIVRSPLRLPIRPDHVLVKIV 132

Query: 125 FAGVNASDVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT 183
           +AGVNASDVNFSSG YF     D+ S LP DAGFE+VG+IAAVGDSV ++KVGTPAA+MT
Sbjct: 133 YAGVNASDVNFSSGHYFGGSSKDLQSMLPLDAGFESVGIIAAVGDSVTHLKVGTPAAMMT 192

Query: 184 FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGT 242
           FGSYAEF  V SKHILPVARPDPEVVAMLTSGLTASIALE+A    SGK VLVTAAAGGT
Sbjct: 193 FGSYAEFVTVHSKHILPVARPDPEVVAMLTSGLTASIALEKAAQMESGKVVLVTAAAGGT 252

Query: 243 GQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIY 302
           GQFAVQLAKLAGN VVATCGG+ KA LLK+LGVDRVI+Y++EDIKTV K E+PKG DIIY
Sbjct: 253 GQFAVQLAKLAGNKVVATCGGKAKATLLKDLGVDRVIDYRSEDIKTVLKTEYPKGIDIIY 312

Query: 303 ESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           ESVGGDMF+LCL ALA YGRLIVIGMISQYQGE+GW+PSNYPGLCEKIL KSQT+
Sbjct: 313 ESVGGDMFSLCLNALATYGRLIVIGMISQYQGENGWEPSNYPGLCEKILKKSQTI 367

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445868|ref|XP_004140694.1| PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Cucumis sativus]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/355 (75%), Positives = 305/355 (85%), Gaps = 4/355 (1%)

Query: 5   VASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKYLVRS 64
           V  +F + +GGFVPMEMV+KG FELI DESKAGSCLWITNRRGMEYWP+S E+AKYL+ S
Sbjct: 209 VGERFAERLGGFVPMEMVIKGTFELINDESKAGSCLWITNRRGMEYWPSSTEEAKYLLPS 268

Query: 65  SGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKII 124
           S   K+SS+       V +P+SFEK++VHTL+HNFR AT  V +PLRLPI+P+HVLVKI+
Sbjct: 269 SRLGKQSSTA--FFQKVDIPQSFEKVIVHTLSHNFRGATSIVHSPLRLPIRPDHVLVKIV 326

Query: 125 FAGVNASDVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT 183
           +AGVNASDVNFSSG YF     D+ S LP DAGFE+VG+IAAVGDSV ++KVGTPAA+MT
Sbjct: 327 YAGVNASDVNFSSGHYFGGSSKDLQSMLPLDAGFESVGIIAAVGDSVTHLKVGTPAAMMT 386

Query: 184 FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGT 242
           FGSYAEF  V SKHILPVARPDPEVVAMLTSGLTASIALE+A    SGK VLVTAAAGGT
Sbjct: 387 FGSYAEFVTVHSKHILPVARPDPEVVAMLTSGLTASIALEKAAQMESGKVVLVTAAAGGT 446

Query: 243 GQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIY 302
           GQFAVQLAKLAGN VVATCGG+ KA LLK+LGVDRVI+Y++EDIKTV K E+PKG DIIY
Sbjct: 447 GQFAVQLAKLAGNKVVATCGGKAKATLLKDLGVDRVIDYRSEDIKTVLKTEYPKGIDIIY 506

Query: 303 ESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           ESVGGDMF+LCL ALA YGRLIVIGMISQYQGE+GW+PSNYPGLCEKIL KSQT+
Sbjct: 507 ESVGGDMFSLCLNALATYGRLIVIGMISQYQGENGWEPSNYPGLCEKILKKSQTI 561

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4958922|dbj|BAA78050.1| NADPH oxidoreductase homolog [Cicer arietinum]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/359 (76%), Positives = 310/359 (86%), Gaps = 5/359 (1%)

Query: 1   MGLKVASKFIDLMGGFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYWPTSEEKAKY 60
           MG  +  KF+ +MGGFVPMEMVVKGAFELITDE+KAG CLWITNRRG+EYWPT  E+AKY
Sbjct: 41  MGTMIGPKFLSMMGGFVPMEMVVKGAFELITDENKAGDCLWITNRRGLEYWPTPSEEAKY 100

Query: 61  LVRSSGSMKRSSSQVPLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVL 120
           L+RS+ S +R+  + P    ++LPESFEK+VV TL HNFR+AT  VRAPLRLPIKPN+VL
Sbjct: 101 LLRSTRSRRRTEYKAP---PIKLPESFEKIVVQTLTHNFRNATSVVRAPLRLPIKPNYVL 157

Query: 121 VKIIFAGVNASDVNFSSGRYFSDGN-DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA 179
           VKII+AGVNASDVNFSSGRYF   N D  SRLPFDAGFEAVG+IAAVGDSV ++KVG P 
Sbjct: 158 VKIIYAGVNASDVNFSSGRYFGGNNSDTASRLPFDAGFEAVGVIAAVGDSVTDLKVGMPC 217

Query: 180 AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA 238
           A MTFG YAEFTM+PSK+ LP+ RP+PE VAMLTSGLTASIALE+AG   SGK VLVTAA
Sbjct: 218 AFMTFGGYAEFTMIPSKYALPMPRPEPEGVAMLTSGLTASIALEKAGQMESGKVVLVTAA 277

Query: 239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           AGGTGQFAVQLAKLAGNTVVATCGG  KA+LLKELGVDRVI+Y +EDIKTV ++EFPKG 
Sbjct: 278 AGGTGQFAVQLAKLAGNTVVATCGGGAKAKLLKELGVDRVIDYHSEDIKTVLRKEFPKGI 337

Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           DIIYESVGGDM  LCL ALAV+GRLIVIGMISQYQGE+GW PS YPGLCEK+L+KSQTV
Sbjct: 338 DIIYESVGGDMLKLCLDALAVHGRLIVIGMISQYQGENGWTPSKYPGLCEKLLSKSQTV 396

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	362
MGI|MGI:2444835	377	Zadh2 "zinc binding alcohol de	0.743	0.713	0.482	8.1e-60
RGD|1309999	377	Zadh2 "zinc binding alcohol de	0.743	0.713	0.482	1.3e-59
UNIPROTKB|Q24K16	377	ZADH2 "Zinc-binding alcohol de	0.743	0.713	0.492	3.5e-59
UNIPROTKB|Q8N4Q0	377	ZADH2 "Zinc-binding alcohol de	0.743	0.713	0.492	3.5e-59
UNIPROTKB|E2R136	377	ZADH2 "Uncharacterized protein	0.743	0.713	0.489	1.2e-58
UNIPROTKB|F1N5J9	308	ZADH2 "Zinc-binding alcohol de	0.629	0.740	0.514	2.4e-53
UNIPROTKB|F1NSU6	313	LOC100859402 "Uncharacterized	0.629	0.728	0.480	1.7e-52
UNIPROTKB|B4DZ91	254	ZADH2 "cDNA FLJ52809, highly s	0.486	0.692	0.536	1.4e-41
UNIPROTKB|J3KTQ8	155	ZADH2 "Zinc-binding alcohol de	0.419	0.980	0.568	2.3e-39
UNIPROTKB|Q48PR7	325	qor2 "Quinone oxidoreductase"	0.582	0.649	0.363	2.4e-28

MGI|MGI:2444835 Zadh2 "zinc binding alcohol dehydrogenase, domain containing 2" [Mus musculus (taxid:10090)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 134/278 (48%), Positives = 181/278 (65%)

Query:    83 LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
             +P + +KLVV  L+ NF +A T++   P+ LP     +LV+  F G+NASD+N+S+GRY 
Sbjct:    29 IPRTMQKLVVTRLSPNFHEAVTLRRDCPVPLP-GDGDLLVRNRFVGINASDINYSAGRY- 86

Query:   142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
                 D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+   +P
Sbjct:    87 ----DPSLKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIAIP 142

Query:   201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
             +    PE + ML SG TA ++LE+ G  S GKKVLVTAAAGGTGQFAVQL+K+A   V+ 
Sbjct:   143 MPSVKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIG 202

Query:   260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
             TC  + KA  LK +G DR INY+ E ++TV K+E+P+G D++YESVGG MF+L + ALA 
Sbjct:   203 TCSSDEKAAFLKSIGCDRPINYRTEPVETVLKQEYPEGVDVVYESVGGAMFDLAVDALAT 262

Query:   320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
              GRLIVIG IS YQ   G  P     L  K+L KS ++
Sbjct:   263 KGRLIVIGFISGYQSPTGLSPIKAGVLPTKLLKKSASL 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|1309999 Zadh2 "zinc binding alcohol dehydrogenase, domain containing 2" [Rattus norvegicus (taxid:10116)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 134/278 (48%), Positives = 182/278 (65%)

Query:    83 LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
             +P + +KLVV  L+ NF +A T++   P+ LP     +LV+  F G+NASD+N+S+GRY 
Sbjct:    29 IPRTMQKLVVTRLSPNFHEAVTLRRDCPVPLP-GDGDLLVRNRFVGINASDINYSAGRY- 86

Query:   142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
                 D   + PFD GFE +G + A+G S +    VG   A +T GS+AE+T+VP+   +P
Sbjct:    87 ----DPSVKPPFDIGFEGIGEVVALGLSASAKYTVGQAVAYVTPGSFAEYTVVPASIAIP 142

Query:   201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
             +    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQL+KLA   VV 
Sbjct:   143 MPSVKPEYLTLLVSGTTAYISLKELGELSEGKKVLVTAAAGGTGQFAVQLSKLAKCHVVG 202

Query:   260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
             TC  + K+  LK +G DR INY+ E ++TV K+E+P+G D++YESVGG MF+L + ALA 
Sbjct:   203 TCSSDEKSAFLKSVGCDRPINYRTEPVETVLKQEYPEGVDVVYESVGGAMFDLAVDALAT 262

Query:   320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
              GRLIVIG IS YQ   G  P     L  K+L KS ++
Sbjct:   263 KGRLIVIGFISGYQSPTGLSPVKAGALPAKLLKKSASL 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005777 "peroxisome" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q24K16 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Bos taurus (taxid:9913)]

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 137/278 (49%), Positives = 179/278 (64%)

Query:    83 LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
             +P   +KLVV  L+ NFR+A T++   P+ LP     +LV+  F GVNASD+N+S+GRY 
Sbjct:    29 IPSKMQKLVVTRLSPNFREAVTLRRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGRY- 86

Query:   142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV-KVGTPAAIMTFGSYAEFTMVPSKHILP 200
                 D   + PFDAGFE VG + A+G S +    VG   A M  GS+AE+T+VP++  +P
Sbjct:    87 ----DPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMAPGSFAEYTVVPARVAIP 142

Query:   201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
             V    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQLAK A   V+ 
Sbjct:   143 VPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIG 202

Query:   260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
             TC    K+  LK +G DR INY  E + TV ++E+P+G D++YESVGG MF+L + ALA 
Sbjct:   203 TCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALAT 262

Query:   320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
              GRLIVIG +S YQ   G  P     L  K+L KS +V
Sbjct:   263 RGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASV 300

GO:0005777 "peroxisome" evidence=ISS

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8N4Q0 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 137/278 (49%), Positives = 179/278 (64%)

Query:    83 LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
             +P++ +KLVV  L+ NFR+A T+    P+ LP     +LV+  F GVNASD+N+S+GRY 
Sbjct:    29 IPQAMQKLVVTRLSPNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGRY- 86

Query:   142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
                 D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+    P
Sbjct:    87 ----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATP 142

Query:   201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
             V    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+QL+K A   V+ 
Sbjct:   143 VPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 202

Query:   260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
             TC  + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + ALA 
Sbjct:   203 TCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALAT 262

Query:   320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
              GRLIVIG IS YQ   G  P     L  K+L KS +V
Sbjct:   263 KGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASV 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|E2R136 ZADH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 136/278 (48%), Positives = 174/278 (62%)

Query:    83 LPESFEKLVVHTLNHNFRDATIKVR-APLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
             +P + +KL V  L+ NFR+A   +R  P+ LP     +LV+  F GVNASD+N+S+GRY 
Sbjct:    29 IPRAMQKLAVTRLSPNFREAVTLLRDCPVALP-GDRDLLVRNRFVGVNASDINYSAGRY- 86

Query:   142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
                 D   + PFD GFE VG + A+G S +    VG   A M  GS+AE+T+VP+    P
Sbjct:    87 ----DPSVKTPFDVGFEGVGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASAAAP 142

Query:   201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
             V    PE V +  SG TA I+L + G  S GKKVLVTAAAGGTGQFAVQLAK A   V+ 
Sbjct:   143 VPSVKPEYVTLPVSGTTAYISLNELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIG 202

Query:   260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
             TC  + K+  LK +G DR INY  E + TV K+E+P G D++YESVGG MF+L + ALA+
Sbjct:   203 TCSSDKKSAFLKSIGCDRPINYHTEHVSTVLKQEYPTGVDVVYESVGGAMFDLAVDALAI 262

Query:   320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
              GRLIVIG +S YQ   G  P     L  K+L KS +V
Sbjct:   263 KGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASV 300

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1N5J9 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Bos taurus (taxid:9913)]

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 121/235 (51%), Positives = 154/235 (65%)

Query:   125 FAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV-KVGTPAAIMT 183
             F GVNASD+N+S+GRY     D   + PFDAGFE VG + A+G S +    VG   A M 
Sbjct:     2 FVGVNASDINYSAGRY-----DPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMA 56

Query:   184 FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGT 242
              GS+AE+T+VP++  +PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGT
Sbjct:    57 PGSFAEYTVVPARVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGT 116

Query:   243 GQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIY 302
             GQFAVQLAK A   V+ TC    K+  LK +G DR INY  E + TV ++E+P+G D++Y
Sbjct:   117 GQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVY 176

Query:   303 ESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
             ESVGG MF+L + ALA  GRLIVIG +S YQ   G  P     L  K+L KS +V
Sbjct:   177 ESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASV 231

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1NSU6 LOC100859402 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 113/235 (48%), Positives = 156/235 (66%)

Query:   125 FAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMT 183
             F G+NASD+N+S+GRY     D   + P D GFE +G + A+G S + +  VG   A + 
Sbjct:     7 FVGINASDINYSAGRY-----DTSVKPPLDVGFEGIGDVVALGLSASAHYSVGQAVAYVK 61

Query:   184 FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGT 242
              GS+AE+T+VP+K  +P+    PE + ++ SG TA I+L+  G  S GKKVLVTAAAGGT
Sbjct:    62 AGSFAEYTVVPAKEAVPLPSVKPEFLTLMVSGATAYISLKNLGGLSEGKKVLVTAAAGGT 121

Query:   243 GQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIY 302
             GQFAVQLAK A   V+ TC  + K+  LK +G D VINYK E++++V ++++P+G D++Y
Sbjct:   122 GQFAVQLAKKAKCHVIGTCSSDEKSGFLKSIGCDHVINYKTENVESVLRKDYPEGVDVVY 181

Query:   303 ESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
             ESVGG MF+L + +LA  GRLIVIG I+ YQ   G  P     L  K+L KS +V
Sbjct:   182 ESVGGKMFDLAVNSLATKGRLIVIGFIAGYQNPTGTHPIKAEFLPAKLLKKSASV 236

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

UNIPROTKB|B4DZ91 ZADH2 "cDNA FLJ52809, highly similar to Zinc-binding alcohol dehydrogenasedomain-containing protein 2 (EC 1.-.-.-)" [Homo sapiens (taxid:9606)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 95/177 (53%), Positives = 119/177 (67%)

Query:   182 MTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAG 240
             M  GS+AE+T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAG
Sbjct:     1 MAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 60

Query:   241 GTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDI 300
             GTGQFA+QL+K A   V+ TC  + K+  LK LG DR INYK E + TV K+E+P+G D+
Sbjct:    61 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 120

Query:   301 IYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
             +YESVGG MF+L + ALA  GRLIVIG IS YQ   G  P     L  K+L KS +V
Sbjct:   121 VYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASV 177

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

UNIPROTKB|J3KTQ8 ZADH2 "Zinc-binding alcohol dehydrogenase domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 87/153 (56%), Positives = 109/153 (71%)

Query:   182 MTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAG 240
             M  GS+AE+T+VP+    PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAG
Sbjct:     1 MAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 60

Query:   241 GTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDI 300
             GTGQFA+QL+K A   V+ TC  + K+  LK LG DR INYK E + TV K+E+P+G D+
Sbjct:    61 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 120

Query:   301 IYESVGGDMFNLCLKALAVYGRLIVIGMISQYQ 333
             +YESVGG MF+L + ALA  GRLIVIG IS YQ
Sbjct:   121 VYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 153

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

UNIPROTKB|Q48PR7 qor2 "Quinone oxidoreductase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 81/223 (36%), Positives = 119/223 (53%)

Query:   114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             IK N +L+ +  AGVN  D     G+Y           PF  G EA G+I+AVG+ V ++
Sbjct:    25 IKKNEILLDVHAAGVNFPDTLIIEGKY-----QFKPPFPFSPGGEAAGVISAVGEKVTHL 79

Query:   174 KVGTPAAIMT-FGSYAEFTMVPSKHILPVARP-DPEVVAM--LTSGLTASIALEQ-AGPA 228
             K G     +T +GS+AE   VP  ++LP+    D    A   +T G T+  AL+Q A   
Sbjct:    80 KPGDRVMALTGWGSFAEQVAVPGYNVLPIPTSMDFTTAAAFSMTYG-TSMHALKQRANLQ 138

Query:   229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT 288
             +G+ +LV  A+GG G  AV++ K  G  V+A      K ++ K  G D +INY    +K 
Sbjct:   139 AGETLLVLGASGGVGLAAVEIGKALGARVIAAASSAEKLEVAKNAGADELINYSETSLKD 198

Query:   289 VFKE-EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
               K      G D+IY+ VGGD+F+  ++A+A  GRL+V+G  S
Sbjct:   199 EVKRLTNDNGADVIYDPVGGDLFDQAIRAIAWNGRLLVVGFAS 241

GO:0003960 "NADPH:quinone reductase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	362
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-140
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-52
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-51
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	6e-49
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	8e-47
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-45
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-43
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	2e-42
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-41
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-40
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	5e-40
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-39
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	9e-39
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-38
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	3e-35
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	8e-35
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-34
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	2e-34
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	5e-34
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-33
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-32
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-32
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-31
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-29
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-29
smart00829	287	smart00829, PKS_ER, Enoylreductase	4e-28
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	9e-28
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	1e-27
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	1e-27
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-27
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	8e-27
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-26
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	2e-25
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	8e-25
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-24
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	3e-23
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	4e-23
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-22
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-22
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	4e-22
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	5e-22
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	8e-22
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	1e-20
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-20
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-20
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	3e-20
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	7e-20
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-19
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-18
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	8e-18
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-17
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	3e-17
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	3e-17
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	5e-17
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	6e-17
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	7e-17
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	1e-16
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-16
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	3e-16
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	4e-16
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	6e-16
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	8e-16
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	1e-15
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	3e-15
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	4e-14
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	1e-13
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	1e-13
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-13
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-13
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-13
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-13
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	3e-13
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-13
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-12
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-12
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	4e-12
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	1e-11
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	3e-11
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-10
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-10
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-10
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-10
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	7e-10
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	8e-10
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	3e-09
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	6e-09
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	7e-09
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	7e-09
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	7e-08
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	1e-07
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	2e-07
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	5e-07
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	8e-07
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	3e-06
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	3e-06
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	3e-06
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	8e-06
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	9e-06
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-05
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	5e-05
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	2e-04
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	4e-04
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	5e-04
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	6e-04
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	7e-04
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	7e-04
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	9e-04
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	0.001
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	0.004

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  400 bits (1030), Expect = e-140
 Identities = 154/273 (56%), Positives = 191/273 (69%), Gaps = 7/273 (2%)

Query: 86  SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN 145
           SF KLVVH L+ NFR+AT  V  P+ LP  P  VLVK  F G+NASD+NF++GRY     
Sbjct: 1   SFRKLVVHRLSPNFREATSIVDVPVPLPG-PGEVLVKNRFVGINASDINFTAGRYD---- 55

Query: 146 DIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD 205
             G + PFD GFE VG + AVG+ V + KVG   A M+FG++AE+ +VP++H +PV    
Sbjct: 56  -PGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPVPELK 114

Query: 206 PEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE 264
           PEV+ +L SGLTASIALE+ G   SG+ VLVTAAAGGTGQFAVQLAKLAG  V+ TC  +
Sbjct: 115 PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSD 174

Query: 265 HKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
            KA+ LK LG DR INYK ED+  V K+E+PKG D++YESVGG+MF+ C+  LA+ GRLI
Sbjct: 175 EKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLI 234

Query: 325 VIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           VIG IS YQ   G  P     L  K+LAKS +V
Sbjct: 235 VIGFISGYQSGTGPSPVKGATLPPKLLAKSASV 267

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  175 bits (447), Expect = 2e-52
 Identities = 95/250 (38%), Positives = 121/250 (48%), Gaps = 18/250 (7%)

Query: 89  KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            +         +   +    P      P  VLV++  AGVN  DV    G          
Sbjct: 5   VVEEFGGPEVLKVVEVPEPEP-----GPGEVLVRVKAAGVNPIDVLVRQGLAP-----PV 54

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSYAEFTMVPSK--HILPVA 202
             LPF  G EA G++ AVG  V   KVG   A +      G YAE+ +VP+     LP  
Sbjct: 55  RPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDG 114

Query: 203 RPDPEVVAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC 261
               E  A+  +GLTA +AL        G+ VLV  AAGG G  A+QLAK  G TVVA  
Sbjct: 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVV 174

Query: 262 GGEHKAQLLKELGVDRVINYKAEDI-KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVY 320
               K +LLKELG D VINY+ ED  + V +    KG D++ ++VGGD F   L ALA  
Sbjct: 175 SSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPG 234

Query: 321 GRLIVIGMIS 330
           GRL+ IG +S
Sbjct: 235 GRLVSIGALS 244

Length = 326

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  174 bits (443), Expect = 1e-51
 Identities = 85/222 (38%), Positives = 118/222 (53%), Gaps = 14/222 (6%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P  P  V +++  AGVN  D+    G+Y      +   LPF  G E  G++ AVG+ V  
Sbjct: 24  PGAPGEVRIRVEAAGVNFPDLLMIQGKY-----QVKPPLPFVPGSEVAGVVEAVGEGVTG 78

Query: 173 VKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPDP----EVVAMLTSGLTASIALEQ-AG 226
            KVG    A+   G +AE  +VP+  + P+  PD     E  A+  +  TA  AL + A 
Sbjct: 79  FKVGDRVVALTGQGGFAEEVVVPAAAVFPL--PDGLSFEEAAALPVTYGTAYHALVRRAR 136

Query: 227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI 286
              G+ VLV  AAGG G  AVQLAK  G  V+A    E K  L + LG D VI+Y+  D+
Sbjct: 137 LQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDL 196

Query: 287 KTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           +   K     +G D++Y+ VGGD+F   L++LA  GRL+VIG
Sbjct: 197 RERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIG 238

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  166 bits (424), Expect = 6e-49
 Identities = 84/223 (37%), Positives = 107/223 (47%), Gaps = 12/223 (5%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
              P  VLV+    GVN  D  F SG Y          LPF  G E  G++ AVG  V  
Sbjct: 23  EPGPGEVLVRNTAIGVNFIDTYFRSGLYPLP-------LPFVLGVEGAGVVEAVGPGVTG 75

Query: 173 VKVGTPAAIMT-FGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGP-A 228
            KVG   A     G+YAE+ +VP+  ++ +     D    A+L  GLTA   L +  P  
Sbjct: 76  FKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVK 135

Query: 229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT 288
            G  VLV AAAGG G    Q AK  G TV+ T   E KA+L +  G D VINY+ ED   
Sbjct: 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVE 195

Query: 289 VFKE-EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
             +E    +G D++Y+ VG D F   L +L   G L+  G  S
Sbjct: 196 RVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNAS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  161 bits (410), Expect = 8e-47
 Identities = 84/231 (36%), Positives = 116/231 (50%), Gaps = 30/231 (12%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYF--SDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            P  VL+++  AGVN +D+    G Y      +DI        G E  G++ AVG  V  
Sbjct: 26  GPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI-------LGLEVAGVVVAVGPGVTG 78

Query: 173 VKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD----------PEVVAMLTSGLTASIA 221
            KVG    A++  G YAE+ +VP+  +LPV  P+          PEV        TA   
Sbjct: 79  WKVGDRVCALLAGGGYAEYVVVPAGQLLPV--PEGLSLVEAAALPEVF------FTAWQN 130

Query: 222 L-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN 280
           L +  G  +G+ VL+   A G G  A+QLAK  G  V+AT G E K +  + LG D  IN
Sbjct: 131 LFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAIN 190

Query: 281 YKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           Y+ ED     KE    +G D+I + VGGD     L+ALA  GRL++IG++ 
Sbjct: 191 YRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLG 241

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  158 bits (401), Expect = 1e-45
 Identities = 80/222 (36%), Positives = 108/222 (48%), Gaps = 18/222 (8%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  VLVK+  AGVN  D+    G            LP   G +  G++ AVG  V   
Sbjct: 25  PGPGEVLVKVHAAGVNPVDLKIREGLL---KAAFPLTLPLIPGHDVAGVVVAVGPGVTGF 81

Query: 174 KVGTPAAIMTF----GSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQ 224
           KVG     MT     G+YAE+ +VP+  +    +P      E  A+  +GLTA  AL E 
Sbjct: 82  KVGDEVFGMTPFTRGGAYAEYVVVPADEL--ALKPANLSFEEAAALPLAGLTAWQALFEL 139

Query: 225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE 284
            G  +G+ VL+  AAGG G FAVQLAK  G  V+AT    + A  L+ LG D VI+Y   
Sbjct: 140 GGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAAN-ADFLRSLGADEVIDYTKG 198

Query: 285 DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
           D +   +   P G D + ++VGG+     L  +   GRL+ I
Sbjct: 199 DFE---RAAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSI 237

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  152 bits (386), Expect = 2e-43
 Identities = 74/226 (32%), Positives = 104/226 (46%), Gaps = 19/226 (8%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
             KP  VLVK+  A VN  D     G        +G   P   G +  G + AVG  V  
Sbjct: 23  TPKPGEVLVKVHAASVNPVDWKLRRGPPKLL---LGRPFPPIPGMDFAGEVVAVGSGVTR 79

Query: 173 VKVGTP----AAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQ 224
            KVG            G+ AE+ + P   +    +P+     E  A+  +GLTA  AL  
Sbjct: 80  FKVGDEVFGRLPPKGGGALAEYVVAPESGL--AKKPEGVSFEEAAALPVAGLTALQALRD 137

Query: 225 AG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA 283
           AG    G++VL+  A+GG G FAVQ+AK  G  V   C     A+L++ LG D VI+Y  
Sbjct: 138 AGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTT 196

Query: 284 EDIKTVFKEEFPKGFDIIYESVGGDMFNL--CLKALAVYGRLIVIG 327
           ED   +        +D+I+++VG   F+L     AL   GR + +G
Sbjct: 197 EDFVALTAGGEK--YDVIFDAVGNSPFSLYRASLALKPGGRYVSVG 240

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  150 bits (381), Expect = 2e-42
 Identities = 81/290 (27%), Positives = 127/290 (43%), Gaps = 30/290 (10%)

Query: 78  NLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSS 137
            +N ++  +         + +FR   + V  P         VL++ ++  ++     +  
Sbjct: 7   QVNRRIVLASRPEGAPVPD-DFRLEEVDVPEP-----GEGQVLLRTLYLSLDP----YMR 56

Query: 138 GRYFSDGNDIGSRL-PFDAGFEAVGLIAAVGDSVNN--VKVGTPAAIMTFGSYAEFTMVP 194
           GR     +D  S   P + G   VG   A   + N+   + G    ++    + E+ +  
Sbjct: 57  GRM----SDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGD--IVVGVSGWQEYAISD 110

Query: 195 SKHILPV----ARPDPEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQL 249
            + +  +    A     +  +   GLTA   L   G P +G+ V+V+AAAG  G    Q+
Sbjct: 111 GEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQI 170

Query: 250 AKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD 308
           AKL G  VV   GG  K   L  ELG D  I+YKAED     KE  PKG D+ +E+VGG+
Sbjct: 171 AKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGE 230

Query: 309 MFNLCLKALAVYGRLIVIGMISQYQG-EHGWQPSNYPGLCEKILAKSQTV 357
           + +  L  L ++ R+ V G ISQY   E    P   P     ++AK   V
Sbjct: 231 VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLP----LLMAKRLRV 276

Length = 340

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  146 bits (372), Expect = 3e-41
 Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 15/222 (6%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  VLV++  +GVN  D    +G Y          LP+  G +  G++ AVG+ V+ +KV
Sbjct: 27  PGEVLVRVHASGVNPVDTYIRAGAYPGLPP-----LPYVPGSDGAGVVEAVGEGVDGLKV 81

Query: 176 GTP------AAIMTFGSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIAL-EQAG 226
           G              G+ AE+ +VP+  +  LP      +  A+    LTA  AL  +AG
Sbjct: 82  GDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAG 141

Query: 227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI 286
             +G+ VLV   +G  G  AVQLA+ AG  V+AT      A+L+++ G D V NY+AED+
Sbjct: 142 AKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDL 201

Query: 287 KTVFKE-EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
                     +G D+I E +        L  LA  GR++V G
Sbjct: 202 ADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYG 243

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  143 bits (362), Expect = 2e-40
 Identities = 76/244 (31%), Positives = 110/244 (45%), Gaps = 34/244 (13%)

Query: 118 HVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGT 177
            VLV++  AG+  +D++   G Y         +LP   G E  G++  VG  V  VKVG 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGY-----PPPPKLPLILGHEGAGVVVEVGPGVTGVKVGD 55

Query: 178 PAAI------------------------MTFGSYAEFTMVPSKHILPVARPDPEVVAMLT 213
              +                           G +AE+ +VP+ +++P+        A L 
Sbjct: 56  RVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALL 115

Query: 214 S--GLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL 270
                TA  AL +AG    G  VLV  A GG G  A QLAK AG  V+ T   + K +L 
Sbjct: 116 PEPLATAYHALRRAGVLKPGDTVLVLGA-GGVGLLAAQLAKAAGARVIVTDRSDEKLELA 174

Query: 271 KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM-FNLCLKALAVYGRLIVIGMI 329
           KELG D VI+YK ED++   +     G D++ ++VGG       L+ L   GR++V+G  
Sbjct: 175 KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGT 234

Query: 330 SQYQ 333
           S   
Sbjct: 235 SGGP 238

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  143 bits (364), Expect = 5e-40
 Identities = 79/253 (31%), Positives = 110/253 (43%), Gaps = 28/253 (11%)

Query: 106 VRAPLRLPIKPNHVLVKIIFAGVNASD----VNFSSGRYFSDGNDIGSRLPFDAGFEAVG 161
           V  PL    K   VLV+ ++  V   D       S  + +S    +G   P   G   VG
Sbjct: 23  VEVPLPEL-KDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGE--PMRGG--GVG 74

Query: 162 LIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTS------- 214
            +        + KVG    +  F  + E+ +V     L     DP +   L++       
Sbjct: 75  EVVESRSP--DFKVGD--LVSGFLGWQEYAVVDGASGLRKL--DPSLGLPLSAYLGVLGM 128

Query: 215 -GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK- 271
            GLTA   L E   P  G+ V+V+AAAG  G    Q+AKL G  VV   G + K + L  
Sbjct: 129 TGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVE 188

Query: 272 ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ 331
           ELG D  INYK  D+    KE  P G D+ +++VGG++ +  L  L   GR+ + G ISQ
Sbjct: 189 ELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQ 248

Query: 332 YQGEHGWQPSNYP 344
           Y       P N  
Sbjct: 249 YNATEPPGPKNLG 261

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  143 bits (362), Expect = 1e-39
 Identities = 85/239 (35%), Positives = 115/239 (48%), Gaps = 15/239 (6%)

Query: 104 IKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI 163
           +KV            V V++   G+N +D+    G Y     D   + PF  GFE  G +
Sbjct: 14  LKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLY-----DSAPKPPFVPGFECAGTV 68

Query: 164 AAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTA 218
            AVG+ V + KVG     +T FG YAE   VP+  + P+  PD     E  A   + LTA
Sbjct: 69  EAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPL--PDGMSFEEAAAFPVNYLTA 126

Query: 219 SIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVD 276
             AL E      G+ VLV +AAGG G  A QL K   N TVV T     K + LKE GV 
Sbjct: 127 YYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALKENGVT 185

Query: 277 RVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGE 335
            VI+Y+ +D     K+  P+G DI+ +++GG+        L   GRL+V G  +   GE
Sbjct: 186 HVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGE 244

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  140 bits (355), Expect = 9e-39
 Identities = 81/228 (35%), Positives = 111/228 (48%), Gaps = 19/228 (8%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
               VL+++   G+N +D  F  G Y          LP   G+EA G++ AVG  V    
Sbjct: 26  GAGEVLIRVEAIGLNRADAMFRRGAYIEPPP-----LPARLGYEAAGVVEAVGAGVTGFA 80

Query: 175 VG-----TPAAIM-TFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-E 223
           VG      PAA +  +G+YAE+ +VP+  ++    PD     E  A+    LTA  AL E
Sbjct: 81  VGDRVSVIPAADLGQYGTYAEYALVPAAAVVK--LPDGLSFVEAAALWMQYLTAYGALVE 138

Query: 224 QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA 283
            AG   G  VL+TAA+   G  A+Q+A  AG TV+AT     K   L  LG   VI    
Sbjct: 139 LAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDE 198

Query: 284 EDI-KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           ED+   V +    KG D++++ VGG  F     ALA  G L+V G +S
Sbjct: 199 EDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALS 246

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  139 bits (353), Expect = 2e-38
 Identities = 85/240 (35%), Positives = 117/240 (48%), Gaps = 33/240 (13%)

Query: 106 VRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDA----GFEAVG 161
           V  PL +P K   VL+++  AGVN  D+   +G+Y           P  A    G E  G
Sbjct: 18  VEVPLPVP-KAGEVLIRVAAAGVNRPDLLQRAGKY---------PPPPGASDILGLEVAG 67

Query: 162 LIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD----------PEVVA 210
            + AVG+ V+  KVG    A++  G YAE+  VP+  +LPV  P+          PE   
Sbjct: 68  EVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPV--PEGLSLVEAAALPETFF 125

Query: 211 MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL 270
            + S L      ++ G  +G+ VL+   A G G  A+QLAK  G  V  T G + K    
Sbjct: 126 TVWSNL-----FQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC 180

Query: 271 KELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMI 329
           + LG D  INY+ ED   V K E   KG D+I + VGG   N  +KALA+ GR++ IG  
Sbjct: 181 EALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ 240

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  130 bits (330), Expect = 3e-35
 Identities = 74/220 (33%), Positives = 104/220 (47%), Gaps = 15/220 (6%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
               VLVK+  AG+N  D                   P   G +  G++ AVG  V   K
Sbjct: 26  GAGEVLVKVHAAGLNPVDWKVI------AWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWK 79

Query: 175 VGTPAA----IMTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPA 228
           VG   A    +   GS+AE+T+V ++ +LP+       E  A+  +GLTA  AL +    
Sbjct: 80  VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRI 139

Query: 229 SGKK-VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
              + +L+T  AGG G FAVQLAK AG  V+ TC   +    +K LG D VI+Y  ED+ 
Sbjct: 140 EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKRNFE-YVKSLGADHVIDYNDEDVC 198

Query: 288 TVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
              KE    +G D + ++VGG+        LA  G L+ I
Sbjct: 199 ERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCI 238

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  130 bits (328), Expect = 8e-35
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 16/262 (6%)

Query: 89  KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
           ++VV           +KV            V+VK+  +GV+ +DV    G Y        
Sbjct: 3   EVVVT---RRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ----- 54

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP-DP 206
             LPF  G++ VG + A+G  V   +VG   A +T  G  AE+  + +K+++PV    D 
Sbjct: 55  PPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDA 114

Query: 207 -EVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE 264
            E V ++ + +TA   L +A    +G++VL+  A+GG GQ  ++LA LAG  V  T    
Sbjct: 115 AEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTASER 174

Query: 265 HKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
           + A  L+ELG    I+Y+ +D         P G D++++ VGG+ +     ALA  G L+
Sbjct: 175 NHA-ALRELGA-TPIDYRTKDWLPAMLT--PGGVDVVFDGVGGESYEESYAALAPGGTLV 230

Query: 325 VIGMISQYQGEHGWQPSNYPGL 346
             G  S          +    L
Sbjct: 231 CYGGNSSLLQGRRSLAALGSLL 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  128 bits (325), Expect = 2e-34
 Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 23/227 (10%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
              P  VLV++  +GVN  D     G            LP   G +  G++ AVG+ V  
Sbjct: 24  QPGPGQVLVRVHASGVNPLDTKIRRGGAA-----ARPPLPAILGCDVAGVVEAVGEGVTR 78

Query: 173 VKVG-----TPAAI-MTFGSYAEFTMVPSKHILPVARPDPEVVAMLTS------GLTASI 220
            +VG         +    GS AE+ +V ++ +       P  ++M  +      G+TA  
Sbjct: 79  FRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALK----PANLSMREAAALPLVGITAWE 134

Query: 221 AL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI 279
            L ++A   +G+ VL+   AGG G  AVQLAK AG  V AT   E KA   + LG D +I
Sbjct: 135 GLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASSE-KAAFARSLGADPII 193

Query: 280 NYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
            Y+   ++ V +    +GFD+++++VGG+  +   +A+A+YGR++ I
Sbjct: 194 YYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSI 240

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  129 bits (326), Expect = 2e-34
 Identities = 78/251 (31%), Positives = 115/251 (45%), Gaps = 38/251 (15%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSD--------GNDIGSR------LPFDAGFEAV 160
            P  VL+++   GVN +D+N   G Y ++        G             P   G + V
Sbjct: 27  APGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIV 86

Query: 161 GLIAAVGDSVNNVKVG---------------TPAAIMTFGS-----YAEFTMVPSKHILP 200
           G + AVG+ V+  ++G                PA I   GS     +AE+T+VP+++  P
Sbjct: 87  GRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYP 146

Query: 201 VARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVV 258
           V  P  D E+     S  TA   LE+AG  +G+ VLVT A+GG G   VQLAK  G  V+
Sbjct: 147 VNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVI 206

Query: 259 ATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALA 318
           A  G   K + ++ LG D VI  +   +    K    +  D++ + VGG +F   L+ L 
Sbjct: 207 AVAGAA-KEEAVRALGADTVI-LRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLR 264

Query: 319 VYGRLIVIGMI 329
             GR +  G I
Sbjct: 265 PGGRYVTAGAI 275

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  127 bits (322), Expect = 5e-34
 Identities = 77/276 (27%), Positives = 116/276 (42%), Gaps = 47/276 (17%)

Query: 84  PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSD 143
             + +  V+           + V  P      P  VL+K+   GV  +D+      + + 
Sbjct: 1   MMTMKAAVLKKFGQPLEIEEVPVPEP-----GPGEVLIKVEACGVCHTDL------HVAK 49

Query: 144 GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI---------------------- 181
           G+    +LP   G E VG +  VG+ V  +KVG    +                      
Sbjct: 50  GDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCP 109

Query: 182 -------MTFGSYAEFTMVPSKHILPV-ARPDPEVVA-MLTSGLTASIALEQAGPASGKK 232
                   T G YAE+ +VP+++++ +    D    A +L +G+T   AL++A    GK 
Sbjct: 110 NQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKW 169

Query: 233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE 292
           V V  A GG G  AVQ AK  G  V+A    E K +L K+LG D VIN    D      E
Sbjct: 170 VAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSD----ALE 224

Query: 293 EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
              +  D I ++VG       LKAL   G L+++G+
Sbjct: 225 AVKEIADAIIDTVGPATLEPSLKALRRGGTLVLVGL 260

Length = 339

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  125 bits (316), Expect = 3e-33
 Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 14/235 (5%)

Query: 103 TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR--LPFDAGFEAV 160
            +++ +    P  P  VLV+++ A +N SD+   SG Y       GSR  LP   G E V
Sbjct: 13  VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAY-------GSRPPLPAVPGNEGV 65

Query: 161 GLIAAVGDSVNNVKVG-TPAAIMTFGSYAEFTMVPSKHILPVARP-DPEVVAMLT-SGLT 217
           G++  VG  V+ + VG     +   G++ E+ + P+  ++PV      E  AML  + LT
Sbjct: 66  GVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLT 125

Query: 218 ASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD 276
           A + L +      G  V+  AA    G+  +QLAKL G   +     + + + LK LG D
Sbjct: 126 AWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGAD 185

Query: 277 RVINYKAEDI-KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
            VI+   ED+ + V +     G  +  ++VGG+      ++L   G L+  G++S
Sbjct: 186 EVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLS 240

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  123 bits (310), Expect = 1e-32
 Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 26/223 (11%)

Query: 117 NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 176
           + V V++  AG+N  DV  + G    D   +G         E  G++  VG  V  +KVG
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDETPLGL--------ECSGIVTRVGSGVTGLKVG 52

Query: 177 TPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGP-ASGK 231
                +  G++A    V ++ ++ +  PD     E   +  + LTA  AL        G+
Sbjct: 53  DRVMGLAPGAFATHVRVDARLVVKI--PDSLSFEEAATLPVAYLTAYYALVDLARLQKGE 110

Query: 232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-------RVINYKAE 284
            VL+ AAAGG GQ A+QLA+  G  V AT G E K + L+ELG         R +++ A+
Sbjct: 111 SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLSF-AD 169

Query: 285 DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
            I         +G D++  S+ G++     + LA +GR + IG
Sbjct: 170 GILRATG---GRGVDVVLNSLSGELLRASWRCLAPFGRFVEIG 209

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  123 bits (312), Expect = 2e-32
 Identities = 83/257 (32%), Positives = 116/257 (45%), Gaps = 41/257 (15%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
              P+ VLV++  A +N  D+    G            LP   G +  G++ AVG  V N
Sbjct: 24  EPGPDEVLVRVKAAALNHLDLWVRRGMPGIK-----LPLPHILGSDGAGVVEAVGPGVTN 78

Query: 173 VKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP 204
           VK G    I                               G YAE+  VP++++LP+  P
Sbjct: 79  VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPI--P 136

Query: 205 D----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
           D     E  A   + LTA   L  +A    G+ VLV  A  G G  A+Q+AKL G TV+A
Sbjct: 137 DNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIA 196

Query: 260 TCGGEHKAQLLKELGVDRVINYKAEDI-KTVFKEEFPKGFDIIYESVGGDMFNLCLKALA 318
           T G E K +  KELG D VI+Y+ ED  + V +    +G D++ E VG   +   LK+LA
Sbjct: 197 TAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLA 256

Query: 319 VYGRLIVIGMISQYQGE 335
             GRL+  G  + Y+  
Sbjct: 257 RGGRLVTCGATTGYEAP 273

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  120 bits (304), Expect = 3e-31
 Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 25/237 (10%)

Query: 110 LRLPI--KPNHVLVKIIFAGVNASDVNFSSG---------RYFSDGNDIGSRLPFDAGFE 158
            R+P+  KPN VL+K+  A VN  DV   SG         R        G   P   G +
Sbjct: 21  ARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80

Query: 159 AVGLIAAVGDSVNNVKVGTP--AAIMTF--GSYAEFTMVPSKHI--LPVARPDPEVVAML 212
             G++  +G  V + ++G     A+  +  G++AE+ +VP   +   P      E  ++ 
Sbjct: 81  CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLP 140

Query: 213 TSGLTASIALEQAGP-----ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA 267
            +GLTA  AL   G      A+GK+VL+   +GG G FA+QL K  G  V  TC  +   
Sbjct: 141 YAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDA-I 199

Query: 268 QLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
            L+K LG D VI+Y  ED +    E     FD+I ++VGGD     LK L   G  +
Sbjct: 200 PLVKSLGADDVIDYNNEDFEEELTER--GKFDVILDTVGGDTEKWALKLLKKGGTYV 254

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  115 bits (289), Expect = 2e-29
 Identities = 72/244 (29%), Positives = 105/244 (43%), Gaps = 44/244 (18%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  VL+K+  AGV   D+ F  G +         + P   G E VG +  VG+ V   K 
Sbjct: 25  PGEVLIKVKAAGVCYRDLLFWKGFF------PRGKYPLILGHEIVGTVEEVGEGVERFKP 78

Query: 176 GTPAAIMTF----------------------------GSYAEFTMVPSKHILPVARPDPE 207
           G    +  +                            G +AE+  VP + ++ +     +
Sbjct: 79  GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSD 138

Query: 208 VVAMLTSGLTASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH 265
             A L + +  +   AL++AG   G  VLVT A GG G  A+QLAK  G  V+A      
Sbjct: 139 ESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE 198

Query: 266 KAQLLKELGVDRVINYKAEDIKTVFKEEFPK--GFDIIYESVGGDMFNLCLKALAVYGRL 323
           K ++LKELG D VI+         F E+  K  G D++ E VG       L++L   GRL
Sbjct: 199 KLKILKELGADYVIDGSK------FSEDVKKLGGADVVIELVGSPTIEESLRSLNKGGRL 252

Query: 324 IVIG 327
           ++IG
Sbjct: 253 VLIG 256

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  115 bits (289), Expect = 2e-29
 Identities = 76/246 (30%), Positives = 108/246 (43%), Gaps = 38/246 (15%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
            P  VLVK+  AGV  SD++         G    ++LP   G E  G +  VG  V N K
Sbjct: 25  GPGEVLVKVKAAGVCHSDLH-----ILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79

Query: 175 VG----------------------------TPAAIMTFGSYAEFTMVPSKHILPV-ARPD 205
           VG                                +   G +AE+ +VP++ ++PV     
Sbjct: 80  VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVP 139

Query: 206 PEVVAMLT-SGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG 263
               A+ T + LT   A+ +AG    G+ VLV    GG G  AVQ+AK  G  V+A    
Sbjct: 140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIK 198

Query: 264 EHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGR 322
           E K +L KELG D V+N   +  K         GFD+I++ VG    F    KA+   GR
Sbjct: 199 EEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGR 258

Query: 323 LIVIGM 328
           ++V+G+
Sbjct: 259 IVVVGL 264

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  110 bits (278), Expect = 4e-28
 Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 31/221 (14%)

Query: 121 VKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDA--GFEAVGLIAAVGDSVNNVKVGTP 178
           +++  AG+N  DV  + G Y           P +A  G E  G++  VG  V  + VG  
Sbjct: 1   IEVRAAGLNFRDVLIALGLY-----------PGEAVLGGECAGVVTRVGPGVTGLAVGDR 49

Query: 179 AAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGPASGKKV 233
              +  G++A   +  ++ ++P+  PD     E   +    LTA  AL + A    G+ V
Sbjct: 50  VMGLAPGAFATRVVTDARLVVPI--PDGWSFEEAATVPVVFLTAYYALVDLARLRPGESV 107

Query: 234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV--DRVINYKAEDIKTVFK 291
           L+ AAAGG GQ A+QLA+  G  V AT G   K   L+ LG+  D + + +       F 
Sbjct: 108 LIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLS----FA 163

Query: 292 EEFP-----KGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           +E       +G D++  S+ G+  +  L+ LA  GR + IG
Sbjct: 164 DEILRATGGRGVDVVLNSLSGEFLDASLRCLAPGGRFVEIG 204

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  110 bits (276), Expect = 9e-28
 Identities = 66/185 (35%), Positives = 92/185 (49%), Gaps = 10/185 (5%)

Query: 152 PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT---FGSYAEFTMVPSKHILPVARPD--- 205
           PF  GFEA G++ AVG  V  + VG      T    G +A    VP   +  V +P    
Sbjct: 38  PFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQV--VRKPASLS 95

Query: 206 -PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE 264
             E  A+    LT   A  +AG A G+ +L+  A GGTG  AVQLA+L G  + AT   +
Sbjct: 96  FEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSD 155

Query: 265 HKAQLLKELGVDRVINYKAEDIKT-VFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRL 323
            K + LK+LGV  VINY  ED +  + +    +G D++  ++ G+     L  LA  GR 
Sbjct: 156 DKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRY 215

Query: 324 IVIGM 328
           + I M
Sbjct: 216 VEIAM 220

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  110 bits (278), Expect = 1e-27
 Identities = 79/249 (31%), Positives = 110/249 (44%), Gaps = 28/249 (11%)

Query: 98  NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVN----FSSGRYFSDGNDIGSRLPF 153
             R   + ++ P   P     VLVK ++   +              Y           PF
Sbjct: 22  ELRTTKLTLKVP---PGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLP---------PF 69

Query: 154 DAGFEAVGL-IAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHIL----PVARPDPE 207
             G    G  +A V DS N + KVG    +  F  + E++++P    L        P   
Sbjct: 70  KPGEVITGYGVAKVVDSGNPDFKVGD--LVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSY 127

Query: 208 VVAML-TSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH 265
            + +L   GLTA     +   P  G+ V V+AA+G  GQ   QLAKL G  VV + G + 
Sbjct: 128 YLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE 187

Query: 266 KAQLLKE-LGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRL 323
           K  LLK  LG D   NYK E D+    K  FP G DI +++VGG M +  L  + ++GR+
Sbjct: 188 KVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRI 247

Query: 324 IVIGMISQY 332
              GMISQY
Sbjct: 248 AACGMISQY 256

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  110 bits (278), Expect = 1e-27
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 38/250 (15%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  VLV++  AGV  SD++   G +   G  +  +LPF  G E  G +  VG  V+ +
Sbjct: 23  PGPGQVLVRVGGAGVCHSDLHVIDGVW---GGILPYKLPFTLGHENAGWVEEVGSGVDGL 79

Query: 174 KVGTP----------------------------AAIMTFGSYAEFTMVPSKHILPVAR-P 204
           K G P                              I T G +AE+ +VPS+ ++ + R  
Sbjct: 80  KEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGL 139

Query: 205 DPEVVAMLT-SGLTASIALEQAGPA--SGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVAT 260
           DP   A L  +GLTA  A+++A P    G  V+V    GG G  AVQ+ + L   TV+A 
Sbjct: 140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVI-GVGGLGHIAVQILRALTPATVIAV 198

Query: 261 CGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAV 319
              E   +L + LG D V+N   + ++ V +    +G D + + VG  +   L  K LA 
Sbjct: 199 DRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAK 258

Query: 320 YGRLIVIGMI 329
            GR +++G  
Sbjct: 259 GGRYVIVGYG 268

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  110 bits (276), Expect = 2e-27
 Identities = 75/223 (33%), Positives = 98/223 (43%), Gaps = 13/223 (5%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  V + +  AGV+  D    SG            LP+  G E  G++ AVG  V+   +
Sbjct: 27  PGQVRIAVAAAGVHFVDTQLRSGW---GPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWL 83

Query: 176 GT---PAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGPA 228
           G           G YAE  +     + PV  PD       VA++  G TA   L+ A   
Sbjct: 84  GRRVVAHTGRAGGGYAELAVADVDSLHPV--PDGLDLEAAVAVVHDGRTALGLLDLATLT 141

Query: 229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT 288
            G  VLVTAAAGG G   VQLAK AG TVV   GG  K  L++ LG D  ++Y   D   
Sbjct: 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPD 201

Query: 289 VFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
             +E     G  ++ + VGG +    L  LA  GR +  G  S
Sbjct: 202 QVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWAS 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  108 bits (272), Expect = 8e-27
 Identities = 59/233 (25%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P+ VLVK+    +N  D          D   I S  P   G +  G +  VG  V   
Sbjct: 24  PGPDEVLVKVKAVALNPVDW------KHQDYGFIPSY-PAILGCDFAGTVVEVGSGVTRF 76

Query: 174 KVGT---------PAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASI 220
           KVG                 G++ E+ +  +     +  PD     E   +    +TA++
Sbjct: 77  KVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKI--PDNISFEEAATLPVGLVTAAL 134

Query: 221 AL-----------EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQL 269
           AL           + +  + GK VL+   +   G  A+QLAKLAG  V+ T   ++   L
Sbjct: 135 ALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKN-FDL 193

Query: 270 LKELGVDRVINYK----AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALA 318
           +K LG D V +Y      EDI+     +     D I      +   LC +AL 
Sbjct: 194 VKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST---PESAQLCAEALG 243

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 3e-26
 Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 15/225 (6%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYF-SDG-NDIGSRLPFDAGFEAVGLIAAVGDSVN 171
            K N VL+K+  AGVN +D     G+Y    G ++I        G E  G +  VG  V 
Sbjct: 26  PKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI-------LGLEVAGYVEDVGSDVK 78

Query: 172 NVKVGTPA-AIMTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPA 228
             K G    A++  G YAE+ +    H++ + +     E  A+  + LTA   L++ G  
Sbjct: 79  RFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDV 138

Query: 229 -SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDI 286
             G+ VL+ A A G G  A QLA+  G   + T   E K    K+L    +I Y   E  
Sbjct: 139 KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGF 198

Query: 287 KTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
               K+    KG +++ + VGG   +   + LAV G+ IV G + 
Sbjct: 199 APKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMG 243

Length = 334

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  104 bits (261), Expect = 2e-25
 Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 214 SGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE 272
            GLTA   L E   P +G+ V+V  AAG  G    Q+AK+ G  V+   G + K   LKE
Sbjct: 127 PGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE 186

Query: 273 LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY 332
           LG D V NYK   ++   KE  P G D  +++VGG+  +  L  +  +GR+ V G IS Y
Sbjct: 187 LGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTY 246

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  102 bits (257), Expect = 8e-25
 Identities = 73/270 (27%), Positives = 110/270 (40%), Gaps = 48/270 (17%)

Query: 91  VVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR 150
           VVH          + V  P      P  VL+KI   GV  +D++ + G +       GS+
Sbjct: 4   VVHAAGGPLEPEEVPVPEP-----GPGEVLIKIEACGVCHTDLHAAEGDWG------GSK 52

Query: 151 LPFDAGFEAVGLIAAVGDSVNNVKVGT-------------------------PAAIMT-- 183
            P   G E VG +  VG  V   KVG                            A+ T  
Sbjct: 53  YPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY 112

Query: 184 --FGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAA 239
              G YAE+ +  +++ + +    P  +   +L +G+T   AL  AGP  G++V V    
Sbjct: 113 TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVLGI- 171

Query: 240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFD 299
           GG G  AVQ A+  G   VA      K +L ++LG D V++  AE      ++    G D
Sbjct: 172 GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELD----EQAAAGGAD 227

Query: 300 -IIYESVGGDMFNLCLKALAVYGRLIVIGM 328
            I+   V G      L  L   GR++++G+
Sbjct: 228 VILVTVVSGAAAEAALGGLRRGGRIVLVGL 257

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  101 bits (254), Expect = 3e-24
 Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 42/249 (16%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
            P  VLVK+  +GV  +D++ + G +          LP   G E  G++ AVG  V+ +K
Sbjct: 25  GPGEVLVKLEASGVCHTDLHAALGDWPVKPK-----LPLIGGHEGAGVVVAVGPGVSGLK 79

Query: 175 VGTPAAI-----------------------------MTFGSYAEFTMVPSKHILPVARPD 205
           VG    +                                G++AE+ +  ++++ P+  PD
Sbjct: 80  VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPI--PD 137

Query: 206 ---PEVVA-MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC 261
               E  A +L +G+T   AL++AG   G  V+++ A GG G   VQ AK  G  V+A  
Sbjct: 138 GLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAID 197

Query: 262 GGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFD-IIYESVGGDMFNLCLKALAV 319
            G+ K +L KELG D  +++K  D ++ V +     G   ++  +V    +   L  L  
Sbjct: 198 VGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRP 257

Query: 320 YGRLIVIGM 328
            G L+ +G+
Sbjct: 258 GGTLVCVGL 266

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 98.8 bits (246), Expect = 3e-23
 Identities = 52/121 (42%), Positives = 68/121 (56%), Gaps = 3/121 (2%)

Query: 214 SGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK- 271
           +G TA     E   P  G  V V+AA+G  GQ   QLAKL G  VV + G   K  LLK 
Sbjct: 142 AGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN 201

Query: 272 ELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           +LG D   NYK E D+    K  FP+G DI +++VGGDM +  L  + ++GR+ V GM+S
Sbjct: 202 KLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVS 261

Query: 331 Q 331
            
Sbjct: 262 L 262

Length = 348

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 97.7 bits (244), Expect = 4e-23
 Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 26/231 (11%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
             KP  VL+++   G+N S++      +   G+    + P   G EAVG +         
Sbjct: 24  EPKPGWVLIRVKAFGLNRSEI------FTRQGHSPSVKFPRVLGIEAVGEVEE--APGGT 75

Query: 173 VKVGTP-AAIM-----TF-GSYAEFTMVPSKHILPVARPDP--EVVAMLTSGLTASIALE 223
              G   A  M     TF GSYAE+T+VP++ +  +       E+ A+  +  TA  +L 
Sbjct: 76  FTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLF 135

Query: 224 QA-GPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI--- 279
           ++ G   G  +L+       G  A++LAK  G TV AT     +A LLKELG D V+   
Sbjct: 136 RSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDD 195

Query: 280 NYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
              AE ++       P GFD + E VG       L+ L   G + + G++ 
Sbjct: 196 GAIAEQLRAA-----PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 96.7 bits (241), Expect = 1e-22
 Identities = 76/256 (29%), Positives = 110/256 (42%), Gaps = 48/256 (18%)

Query: 104 IKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI 163
           +KV         P  VL+++  AGVN  D N  +             +P   G E  G++
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKP-------MPHIPGAEFAGVV 66

Query: 164 AAVGDSVNNVKVGTPAA----------------------------IMTFGSYAEFTMVPS 195
             VGD V  VK G                                +++ G YAE+ +VP 
Sbjct: 67  EEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPE 126

Query: 196 KHILPV-ARPDPEVVAMLTSG-LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA 253
           K++  +      E+ A L    LTA  AL+ AG   G+ V+V  A+G TG FAVQLAK+ 
Sbjct: 127 KNLFKIPDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMM 186

Query: 254 GNTVVATCGGEHKAQLLKELGVDRVINYK--AEDIKTVFKEEFPKGFDIIYESVGGDMFN 311
           G  V+A    +     LKE G D V++Y    E +K + K       D++  S+G   ++
Sbjct: 187 GAEVIAVSRKD----WLKEFGADEVVDYDEVEEKVKEITKM-----ADVVINSLGSSFWD 237

Query: 312 LCLKALAVYGRLIVIG 327
           L L  L   GRL+  G
Sbjct: 238 LSLSVLGRGGRLVTFG 253

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 96.9 bits (242), Expect = 1e-22
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 47/249 (18%)

Query: 114 IKPNHVLVKIIFAGVNASDVN--FSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN 171
             P  VLVK+   G+  SD+     +G Y           P   G E  G +  VG  V+
Sbjct: 22  PGPGEVLVKVKACGICGSDIPRYLGTGAY---------HPPLVLGHEFSGTVEEVGSGVD 72

Query: 172 NVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVAR 203
           ++ VG   A+                               G++AE+  VP+++++ +  
Sbjct: 73  DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKI-- 130

Query: 204 PD---PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVA 259
           PD    E  AM+     A  A+  AG   G  V+V   AG  G  A+Q  K+ G   V+A
Sbjct: 131 PDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVI-GAGTIGLLAIQWLKILGAKRVIA 189

Query: 260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALA 318
               + K  + +ELG D  IN K ED++ V +    +G D++ E+ G        L    
Sbjct: 190 VDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALALAR 249

Query: 319 VYGRLIVIG 327
             G+++++G
Sbjct: 250 PGGKVVLVG 258

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 95.4 bits (238), Expect = 4e-22
 Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 40/249 (16%)

Query: 119 VLVKIIFAGVNASDVNFSSGRYFSDGN-------DIGSRLPFDAGFEAVGLIAAVGDSVN 171
           VLVK+   GV  SD++   G  +  G        D G +LP   G E VG + AVG    
Sbjct: 28  VLVKVTACGVCHSDLHIWDG-GYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAA 86

Query: 172 NVKVGT--------------------------PAAIMTF--GSYAEFTMVP-SKHILPVA 202
           +VKVG                             A+  F  G YAE+ +VP S++++   
Sbjct: 87  DVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPG 146

Query: 203 RPDPEVVAMLT-SGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVAT 260
             DP + A L  SGLTA  A+++  P    + +V   AGG G  A+ L K  G   ++  
Sbjct: 147 GLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVV 206

Query: 261 CGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAV 319
              E K +  K  G D V+N    D      +    G D + + V      +L    LA 
Sbjct: 207 DIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAK 266

Query: 320 YGRLIVIGM 328
            G+L+++G+
Sbjct: 267 GGKLVLVGL 275

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 94.4 bits (235), Expect = 5e-22
 Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 29/234 (12%)

Query: 108 APLRLPIK--------PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA 159
           APLRL +         P+  LV++    +N  ++ F++ R   DG      +P   G++A
Sbjct: 10  APLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER--PDG-----AVP---GWDA 59

Query: 160 VGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPV-ARPDPEVVAML-TSGL 216
            G++       +   VG     +   G++AE   VP+  +  +         A L  +G+
Sbjct: 60  AGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGV 119

Query: 217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD 276
           TA  AL + GP  G++VLVT A+GG G+FAVQLA LAG  VVA  G   +A+ L+ELG  
Sbjct: 120 TALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAA 179

Query: 277 RVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
            V+     ++        P   D++ +SVGG      L+ LA  G ++ +G  S
Sbjct: 180 EVV-VGGSEL-----SGAP--VDLVVDSVGGPQLARALELLAPGGTVVSVGSSS 225

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 89.3 bits (222), Expect = 8e-22
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 241 GTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGF 298
           G G  AVQLAK  G   V+A    E K +L KELG D VINY+ ED     +E    +G 
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 299 DIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQ 331
           D++ + VG        L+ L   GR++V+G+   
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGG 94

Length = 131

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 90.9 bits (226), Expect = 1e-20
 Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 45/244 (18%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
            + V++K+ +AG+   D+    G Y         + P   G E VG +  VG++V   K 
Sbjct: 25  KDEVVIKVNYAGLCYRDLLQLQGFYPR------MKYPVILGHEVVGTVEEVGENVKGFKP 78

Query: 176 GTPAAIMTF----------------------------GSYAEFTMVPSKHILPVARPDPE 207
           G   A + +                            G +AE+  V    ++ V     +
Sbjct: 79  GDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSD 138

Query: 208 VVAMLTSGLTASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH 265
             A++   +T  +   L +AG   G+ VLVT A GG G  A+Q+AK  G  V+A    E 
Sbjct: 139 EGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSES 198

Query: 266 KAQLLKELGVDRVINYKAEDIKTVFKEEFPK--GFDIIYESVGGDMFNLCLKALAVYGRL 323
           KA+++ +   D VI          F EE  K  G DI+ E+VG       L++L + G++
Sbjct: 199 KAKIVSKYA-DYVIVGSK------FSEEVKKIGGADIVIETVGTPTLEESLRSLNMGGKI 251

Query: 324 IVIG 327
           I IG
Sbjct: 252 IQIG 255

Length = 334

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 90.7 bits (226), Expect = 1e-20
 Identities = 73/254 (28%), Positives = 104/254 (40%), Gaps = 41/254 (16%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGF----EAVGLIAAVGD 168
              P  VLV++    +N  D+   +GRY           P         +  G + AVG+
Sbjct: 24  EPGPGEVLVRVHAVSLNYRDLLILNGRY---------PPPVKDPLIPLSDGAGEVVAVGE 74

Query: 169 SVNNVKVG--------------TPAAIMTFGSY--------AEFTMVPSKHILPV-ARPD 205
            V   KVG               P A     +         AE+ ++P + ++       
Sbjct: 75  GVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLS 134

Query: 206 PEVVAMLT-SGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG 263
            E  A L  +GLTA  AL   GP   G  VLV    GG   FA+Q AK AG  V+AT   
Sbjct: 135 FEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGT-GGVSLFALQFAKAAGARVIATSSS 193

Query: 264 EHKAQLLKELGVDRVINYKAE-DI-KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYG 321
           + K +  K LG D VINY+   D  + V K    +G D + E  G       +KA+A  G
Sbjct: 194 DEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGG 253

Query: 322 RLIVIGMISQYQGE 335
            + +IG +S ++  
Sbjct: 254 VISLIGFLSGFEAP 267

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 90.3 bits (225), Expect = 2e-20
 Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 40/263 (15%)

Query: 87  FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGND 146
           F+ LVV   +         +       +    VL+++ ++ +N  D   ++G        
Sbjct: 1   FKALVVEEQDGGVSLFLRTLPLD---DLPEGDVLIRVHYSSLNYKDALAATGNG-----G 52

Query: 147 IGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI-------MTFGSYAEFTMVPSKHIL 199
           +    P   G +A G + +  D     + G    +        T G +AE+  VP+  ++
Sbjct: 53  VTRNYPHTPGIDAAGTVVSSDD--PRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVV 110

Query: 200 PVARPDPEVV----AML--TSGLTASIA---LEQAG--PASGKKVLVTAAAGGTGQFAVQ 248
           P+    PE +    AM+  T+G TA+++   LE  G  P  G  VLVT A GG G  AV 
Sbjct: 111 PL----PEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVA 165

Query: 249 LAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA---EDIKTVFKEEFPKGFDIIYESV 305
           +    G TVVA  G E +A  LK LG   V++ +    E  K + K  +    D    +V
Sbjct: 166 ILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAID----TV 221

Query: 306 GGDMFNLCLKALAVYGRLIVIGM 328
           GGD+    LK     G +   G 
Sbjct: 222 GGDVLANLLKQTKYGGVVASCGN 244

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 89.8 bits (223), Expect = 3e-20
 Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 5/124 (4%)

Query: 214 SGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQL 269
            GLTA I +++ G   P + + ++V+ AAG  G  A Q+ +L G + VV  CG + K QL
Sbjct: 136 PGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQL 195

Query: 270 LK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
           LK ELG D  INYK +++    +E  P+G D+ +++VGG++ +  +  +     +I+ G 
Sbjct: 196 LKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQ 255

Query: 329 ISQY 332
           ISQY
Sbjct: 256 ISQY 259

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 88.9 bits (220), Expect = 7e-20
 Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 7/141 (4%)

Query: 199 LPVARPD--PEVVAMLTSGLTASIA----LEQAGPASGKKVLVTAAAGGTGQFAVQLAKL 252
           L    PD  P  +A+ T G+    A    LE  G   G+ V+V AAAG  G    Q+AKL
Sbjct: 102 LLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKL 161

Query: 253 AGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFN 311
            G  VV   G + K   LK+LG D   NYK  + ++   K+  P G+D  +++VGG+  N
Sbjct: 162 KGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSN 221

Query: 312 LCLKALAVYGRLIVIGMISQY 332
             +  +  +GR+ + G IS Y
Sbjct: 222 TVIGQMKKFGRIAICGAISTY 242

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 15/219 (6%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P  PN VLVK++ A +N +D+N   G Y           P   G E VG +  VG  V +
Sbjct: 26  PGPPNEVLVKMLAAPINPADINQIQGVYPI-KPPTTPEPPAVGGNEGVGEVVKVGSGVKS 84

Query: 173 VKVG---TPAAIMTFGSYAEFTMVPSKHILPV-ARPDPEVVAMLTSG-LTASIALEQAGP 227
           +K G    P      G++    +VP+  ++ V    DPE  A L+    TA   LE    
Sbjct: 85  LKPGDWVIPLR-PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVK 143

Query: 228 ASGKKVLV-TAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQL---LKELGVDRVINY- 281
                 ++   A    GQ  +QLAKL G   +          +L   LK LG D V+   
Sbjct: 144 LQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEE 203

Query: 282 --KAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALA 318
             ++     + K        +    VGG       + L+
Sbjct: 204 ELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLS 242

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 84.5 bits (210), Expect = 2e-18
 Identities = 66/260 (25%), Positives = 99/260 (38%), Gaps = 56/260 (21%)

Query: 111 RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV 170
           R P+ P+ V +KI + GV  SD+      +        ++ P   G E VG++ AVG  V
Sbjct: 19  RRPLGPDDVDIKITYCGVCHSDL------HTLRNEWGPTKYPLVPGHEIVGIVVAVGSKV 72

Query: 171 NNVKVG------------------------------------TPAAIMTFGSYAEFTMVP 194
              KVG                                     P   +T G YA+  +V 
Sbjct: 73  TKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVD 132

Query: 195 SKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLA 250
            + +  +  P   D    A +L +G+T    L++ G   GK+V V    GG G  AV+ A
Sbjct: 133 ERFVFKI--PEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGV-VGIGGLGHLAVKFA 189

Query: 251 KLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDM 309
           K  G  V A      K +   +LG D  I  K  E +K           D+I ++V    
Sbjct: 190 KALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS-----LDLIIDTVSASH 244

Query: 310 -FNLCLKALAVYGRLIVIGM 328
             +  L  L   G L+++G 
Sbjct: 245 DLDPYLSLLKPGGTLVLVGA 264

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 82.8 bits (205), Expect = 8e-18
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 15/223 (6%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
               VLV+   + ++  D+    G Y          LP   G EAVG++ AVG+ V  ++
Sbjct: 27  GAGEVLVRTTLSPIHNHDLWTIRGTY-----GYKPELPAIGGSEAVGVVDAVGEGVKGLQ 81

Query: 175 VGTPAAIMT-FGSYAEFTMVPSKHILPVARPDP---EVVAMLTSG-LTASIALEQAGPAS 229
           VG   A+    G++AE+ + P+  ++P+  PD    EV A L +  L+A + L+  G   
Sbjct: 82  VGQRVAVAPVHGTWAEYFVAPADGLVPL--PDGISDEVAAQLIAMPLSALMLLDFLGVKP 139

Query: 230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV 289
           G+ ++  AA G  G+    LA   G  V+     +     L+ LG+  V++ +    +  
Sbjct: 140 GQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDK 199

Query: 290 FKEEFPKGFDIIY--ESVGGDMFNLCLKALAVYGRLIVIGMIS 330
            + E   G  I    +SVGG +    L  L   G L+  G +S
Sbjct: 200 VR-EAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMS 241

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 82.4 bits (204), Expect = 1e-17
 Identities = 66/281 (23%), Positives = 97/281 (34%), Gaps = 54/281 (19%)

Query: 89  KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
             VV+    + R        P      P  VL+++   G+  SD+       +  G +  
Sbjct: 3   AAVVYVGGGDVRLEEPPPPIP-----GPGDVLIRVTATGICGSDL-----HIY-RGGEPF 51

Query: 149 SRLPFDA-GFEAVGLIAAVGDSVNNVKVGTPAAIMTF----------------------- 184
                   G E VG +  VG  V   KVG    +                          
Sbjct: 52  VPPGDIILGHEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFY 110

Query: 185 ----------GSYAEFTMVPSKHILPVARPD-PEVVAMLTSGLTASIALEQAGPAS--GK 231
                     G +AE+  VP+   L        E  A LT  L  +        A   G 
Sbjct: 111 GYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGG 170

Query: 232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLLKELGVDRVINYKAEDIKTVF 290
            V+V  A G  G  A+ LAKL G +VV        + +L KE G   V+   +ED     
Sbjct: 171 TVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAE 229

Query: 291 KEEFPKG--FDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
             E   G   D++ E+VG     +  L+AL   G ++V+G+
Sbjct: 230 ILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGV 270

Length = 350

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 23/228 (10%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDS-VNNV 173
            P  VL+K+  A +N SD+ F  G+Y          LP   GFE  G + A G   +   
Sbjct: 29  GPGEVLIKVEAAPINPSDLGFLKGQY-----GSTKALPVPPGFEGSGTVVAAGGGPLAQS 83

Query: 174 KVGTPAAIMT--FGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGP 227
            +G   A +   +G+YAE+ +  ++  LP+  PD     +  +   + LTA   LE A  
Sbjct: 84  LIGKRVAFLAGSYGTYAEYAVADAQQCLPL--PDGVSFEQGASSFVNPLTALGMLETARE 141

Query: 228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
              K V+ TAAA   G+  V+L K  G  V+     + +  LLK++G + V+N    D  
Sbjct: 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPD-- 199

Query: 288 TVFKEEFPK-----GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
             F E+  +        I +++VGG +    L A+     L V G +S
Sbjct: 200 --FLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLS 245

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 81.3 bits (201), Expect = 3e-17
 Identities = 72/218 (33%), Positives = 98/218 (44%), Gaps = 12/218 (5%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
            N V V+    G+N  D    SG Y          LP   G EA G+++ VG  V ++KV
Sbjct: 28  ENEVQVENKAIGINYIDTYIRSGLYPP------PSLPSGLGTEAAGVVSKVGSGVKHIKV 81

Query: 176 GTPA--AIMTFGSYAEFTMVPSKH--ILPVARPDPEVVAMLTSGLTASIALEQAGP-ASG 230
           G     A    G+Y+    VP+    ILP A    +  A    GLT    L +       
Sbjct: 82  GDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPD 141

Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF 290
           ++ L  AAAGG G  A Q AK  G  ++ T G   KAQ  K+ G  +VINY+ E+I    
Sbjct: 142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERV 201

Query: 291 KE-EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           KE    K   ++Y+SVG D +   L  L   G ++  G
Sbjct: 202 KEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFG 239

Length = 327

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 80.9 bits (200), Expect = 5e-17
 Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 42/213 (19%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSD---GNDIGSRLPFD-AGFEAVGLIAAVGD 168
            + P  VLV ++ AGVN ++V  + G   S        G   P+   G +A G++ AVG+
Sbjct: 39  ELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGE 98

Query: 169 SVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHIL 199
            V N KVG    +                               +GS+A+F +V +  ++
Sbjct: 99  GVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLM 158

Query: 200 PVARPD----PEVVAMLTSGLTASIALEQAGPAS---GKKVLVTAAAGGTGQFAVQLAKL 252
           P  +P      E  A +  G TA   L    P +   G  VL+  A+GG G  A+QLA+ 
Sbjct: 159 P--KPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARA 216

Query: 253 AGNTVVATCGGEHKAQLLKELGVDRVINYKAED 285
           AG   VA    E KA+  + LG + VIN +  D
Sbjct: 217 AGANPVAVVSSEEKAEYCRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 80.6 bits (200), Expect = 6e-17
 Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 45/274 (16%)

Query: 89  KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
           K +V+          + V  P      P+ VL+K+   G+  +D++   G +       G
Sbjct: 2   KALVYEGPGELEVEEVPVPEP-----GPDEVLIKVAACGICGTDLHIYEGEF-------G 49

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI--------------------------- 181
           +  P   G E  G++ AVG  V   KVG   A+                           
Sbjct: 50  AAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVG 109

Query: 182 MTF-GSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASI-ALEQAGPASGKKVLVTAAA 239
           +T  G +AE+ +VP+K +  +        A L   L+ ++  L+  G   G  VLV  A 
Sbjct: 110 VTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGA- 168

Query: 240 GGTGQFAVQLAKLAGNTVVATCG-GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF 298
           G  G    QL KL G + V      E K +L K+LG    ++   ED +   KE+ P GF
Sbjct: 169 GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ-KEDNPYGF 227

Query: 299 DIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQ 331
           D++ E+ G        ++     G ++V G+ + 
Sbjct: 228 DVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAP 261

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 79.7 bits (197), Expect = 7e-17
 Identities = 68/252 (26%), Positives = 100/252 (39%), Gaps = 51/252 (20%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  VL+K+  AG+  SD++   G Y           P   G E  G I  VG  V   KV
Sbjct: 26  PGEVLIKVAAAGICGSDLHIYKGDYDPV------ETPVVLGHEFSGTIVEVGPDVEGWKV 79

Query: 176 GTPAAIMTF-----------------------------GSYAEFTMVPSKHILPVARPDP 206
           G      T                              G +AE+ +VP + +  +    P
Sbjct: 80  GDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL----P 135

Query: 207 EVVAMLTSGLTASIA------LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT 260
           E +++  + LT  +A       E++G   G  V+V    G  G  A Q+AKL G TVV  
Sbjct: 136 ENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGP-GPIGLLAAQVAKLQGATVVVV 194

Query: 261 CGGEHKAQL--LKELGVDRVINYKAEDIKTVFKEEFPK-GFDIIYESVGGD-MFNLCLKA 316
              + + +L   KELG D V N   ED+  +  E     G D++ E  G        L+ 
Sbjct: 195 GTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALEL 253

Query: 317 LAVYGRLIVIGM 328
           L   GR++ +G+
Sbjct: 254 LRKGGRIVQVGI 265

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 75/261 (28%), Positives = 111/261 (42%), Gaps = 36/261 (13%)

Query: 87  FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGND 146
           F+ LVV     +    ++K      LP     VL+++ ++ VN  D     G     G  
Sbjct: 1   FQALVVEKDEDDVS-VSVKNLTLDDLP--EGDVLIRVAYSSVNYKD-----GLASIPGGK 52

Query: 147 IGSRLPFDAGFEAVGLIA-------AVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHIL 199
           I  R PF  G +  G +          GD V  +       +   G Y+E+  VP++ ++
Sbjct: 53  IVKRYPFIPGIDLAGTVVESNDPRFKPGDEV--IVTSYDLGVSHHGGYSEYARVPAEWVV 110

Query: 200 PVARPD----PEVVAMLTSGLTASIA---LEQAG--PASGKKVLVTAAAGGTGQFAVQLA 250
           P+  P      E + + T+G TA+++   LE+ G  P  G  VLVT A GG G  AV + 
Sbjct: 111 PL--PKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAVSIL 167

Query: 251 KLAGNTVVATCGGEHKAQLLKELGVDRVIN---YKAEDIKTVFKEEFPKGFDIIYESVGG 307
              G  VVA+ G    A  LK+LG   VI     + E IK + K+ +    D     VGG
Sbjct: 168 AKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVD----PVGG 223

Query: 308 DMFNLCLKALAVYGRLIVIGM 328
                 L  L   G + V G+
Sbjct: 224 KTLAYLLSTLQYGGSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 70/247 (28%), Positives = 100/247 (40%), Gaps = 31/247 (12%)

Query: 87  FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGND 146
           ++ L            TIK+  PL    K N ++VK+  A +N  D+   +  Y      
Sbjct: 1   YKALTFKNNTSPLTITTIKL--PLPNCYKDNEIVVKVHAAALNPVDLKLYNS-YTF---- 53

Query: 147 IGSRLPFDAGFEAVGLIAAVGDSV-NNVKVGT------PAAIMTFGSYAEFTMV-PSK-H 197
                    G +  G+I  VG +V +  KVG       P      G+ +++ +V P K  
Sbjct: 54  HFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDK 113

Query: 198 ILPVARPD----PEVVAMLTSGLTASIALEQAG--PASGKKVLVTAAAGGTGQFAVQLAK 251
                +P+     E  A      TA   LE  G       KVLV   +   G+FA+QLAK
Sbjct: 114 KSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK 173

Query: 252 --LAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKG-----FDIIYES 304
                 TVV TC     A+L K+LG D  I+Y A     + K           FD+I + 
Sbjct: 174 NHYNIGTVVGTCSSR-SAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDC 232

Query: 305 VGG-DMF 310
           VGG D+F
Sbjct: 233 VGGYDLF 239

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 78.4 bits (194), Expect = 3e-16
 Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 55/268 (20%)

Query: 103 TIKVRAPLRL--------PIKPNHVLVKIIFAGVNASDVNFSSGR--YFSDGNDIGSRLP 152
            +    P RL              VLV++   G+  SD++   GR  + S         P
Sbjct: 3   ALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFAS--------YP 54

Query: 153 FDAGFEAVGLIAAVGDSVNNVKVGTPAAIM-----------------------TFGSY-- 187
              G E  G +  VG+ V  +KVG    +                          G +  
Sbjct: 55  RILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRD 114

Query: 188 ---AEFTMVPSKHILPVARPDPEVVAMLTSGLTASI---ALEQAGPASGKKVLVTAAAGG 241
              AE+ +VP+  +L       +  A++      +I   A+ +AG  +G  VLV   AG 
Sbjct: 115 GGFAEYIVVPADALLVPEGLSLDQAALVE---PLAIGAHAVRRAGVTAGDTVLVV-GAGP 170

Query: 242 TGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDI 300
            G   +Q+AK  G  V+     + + +  +ELG D  IN   ED+    +E    +G D+
Sbjct: 171 IGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADV 230

Query: 301 IYESVGG-DMFNLCLKALAVYGRLIVIG 327
           + ++ G        ++ +A  GR++++G
Sbjct: 231 VIDATGNPASMEEAVELVAHGGRVVLVG 258

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 78.0 bits (193), Expect = 4e-16
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 43/256 (16%)

Query: 113 PIKPNHVLVKIIFAGVNASDVN-FSSGRYFS--DGNDI--GSRLPFDAGFEAVGLIAAVG 167
           P+KP  V +K+ + G+  SD++ +  G  F   +G+    G   P   G E  G++  VG
Sbjct: 21  PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80

Query: 168 DSVNNVKVGTPAAI----------------------MTF-------GSYAEFTMVPSKHI 198
             V   KVG    +                      + F       G +AE+ +VP+ H+
Sbjct: 81  SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHV 140

Query: 199 LPVARPD--PEVVAMLTSGLTASI-ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG- 254
             +  PD  P   A L   L  +  A+ ++G   G   LV  A G  G   +   K AG 
Sbjct: 141 HKL--PDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTALVLGA-GPIGLLTILALKAAGA 197

Query: 255 NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVG-GDMFNL 312
           + ++ +   E + +L +ELG   V++    D+    ++     G D+ ++  G     + 
Sbjct: 198 SKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDT 257

Query: 313 CLKALAVYGRLIVIGM 328
            + AL   G  + + +
Sbjct: 258 AIDALRPRGTAVNVAI 273

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 77.2 bits (191), Expect = 6e-16
 Identities = 71/259 (27%), Positives = 107/259 (41%), Gaps = 39/259 (15%)

Query: 90  LVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS 149
           LVV   +     A ++      LP     VL+K     V  S +N+      +    +  
Sbjct: 3   LVVEKEDGKVS-AQVETLDLSDLP--EGDVLIK-----VAYSSLNYKDALAITGKGGVVR 54

Query: 150 RLPFDAGFEAVGLIAA-------VGDSV--NNVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
             P   G +A G + +        GD V      +G        G Y+++  VP+  ++P
Sbjct: 55  SYPMIPGIDAAGTVVSSEDPRFREGDEVIVTGYGLGV----SHDGGYSQYARVPADWLVP 110

Query: 201 VARPD----PEVVAMLTSGLTASI---ALEQAG--PASGKKVLVTAAAGGTGQFAVQLAK 251
              P+     E +A+ T+G TA++   ALE+ G  P  G  VLVT A GG G  AV +  
Sbjct: 111 --LPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILS 167

Query: 252 LAGNTVVATCGGEHKAQLLKELGVDRVINYK--AEDIKTVFKEEFPKGFDIIYESVGGDM 309
             G  VVA+ G   +   LKELG   VI+ +  +   K + KE +    D    +VGG  
Sbjct: 168 KLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVD----TVGGHT 223

Query: 310 FNLCLKALAVYGRLIVIGM 328
               L  L   G +   G+
Sbjct: 224 LANVLAQLKYGGAVAACGL 242

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 77.0 bits (190), Expect = 8e-16
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 11/217 (5%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGF--EAVGLIAAVGDSVNNV 173
           P  VLV++   GV  SD+       F+ G           G   E  G + A+G  V  +
Sbjct: 19  PGQVLVRVEGCGVCGSDLP-----AFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGL 73

Query: 174 KVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKV 233
            VG   A ++ G++AE+ +  + H +P+                A     +    +GK V
Sbjct: 74  AVGDRVAGLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALNVFRRGWIRAGKTV 133

Query: 234 LVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE 292
            V   AG  G   +QLA  AG   V+A      +  L +ELG   V+   +E I    +E
Sbjct: 134 AVI-GAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRE 192

Query: 293 EFP-KGFDIIYESVGGD-MFNLCLKALAVYGRLIVIG 327
                G D++ E+VG     +L  + +A  GRL++ G
Sbjct: 193 LTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFG 229

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 76.8 bits (190), Expect = 1e-15
 Identities = 59/185 (31%), Positives = 80/185 (43%), Gaps = 27/185 (14%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
               +LV++    VN  D    +G     G       P   G++A G++ AVG  V   K
Sbjct: 29  GGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQ------PKILGWDASGVVEAVGSEVTLFK 82

Query: 175 VGT----PAAIMTFGSYAEFTMVPSKHILPVAR-P----DPEVVAM-LTSGLTA------ 218
           VG        I   GS AE+ +V  + I  V   P      E  A+ LTS LTA      
Sbjct: 83  VGDEVYYAGDITRPGSNAEYQLVDER-I--VGHKPKSLSFAEAAALPLTS-LTAWEALFD 138

Query: 219 SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDR 277
            + + +     GK +L+   AGG G  A+QLAK     TV+AT         +KELG D 
Sbjct: 139 RLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADH 198

Query: 278 VINYK 282
           VIN+ 
Sbjct: 199 VINHH 203

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 63/261 (24%), Positives = 93/261 (35%), Gaps = 56/261 (21%)

Query: 144 GNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG----TPAA------------------- 180
           G+D    LP   G E  G++  VG+ V+  +VG     P                     
Sbjct: 47  GHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEH 106

Query: 181 --IMTF---GSYAEFTMVPSKHILPVARPD---PEVVAMLTSGL-TASIAL-EQAGPASG 230
                F   GS+AE+  VP   +  V  PD       A L     TA  AL  QA    G
Sbjct: 107 QVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPG 166

Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTV 289
           + V V    GG G  AV +A   G  V+A    + K +L +ELG    +N    ED+   
Sbjct: 167 EWVAVHGC-GGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAA 225

Query: 290 FKEEFPKGFDIIYESVG--GDMFNLCLKALAVYGRLIVIGMIS----------------- 330
            ++    G  +  +++G      N  + +L   GR + +G+                   
Sbjct: 226 VRDLTGGGAHVSVDALGIPETCRN-SVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARE 284

Query: 331 -QYQGEHGWQPSNYPGLCEKI 350
            +  G HG     Y  +   I
Sbjct: 285 LEIVGSHGMPAHRYDAMLALI 305

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 72.0 bits (177), Expect = 4e-14
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 45/263 (17%)

Query: 101 DATIKVR-APLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA 159
           D T+++R  P+ +P  P  VL+++  +G+  SD+      Y+  G+   +      G E 
Sbjct: 9   DRTVELREFPVPVP-GPGEVLLRVKASGLCGSDL-----HYYYHGHRAPAYQGVIPGHEP 62

Query: 160 VGLIAAVGDSVNNVKVGTPAAI--MTF---------------------------GSYAEF 190
            G++ AVG  V + +VG    +                                G +AE+
Sbjct: 63  AGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEY 122

Query: 191 TMVPSKHILPVARPDP---EVVAMLTSGL-TASIALEQAGPASGKKVLVTAAAGGTGQFA 246
            +VP K ++P+  PD       A+L  G+ TA  AL + G +    VLV  A G  G  A
Sbjct: 123 MLVPEKTLIPL--PDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGA-GPVGLGA 179

Query: 247 VQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV 305
           + LA+ L    V+       + +L K LG D VIN   +D++ + +     G D+  E  
Sbjct: 180 LMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECS 239

Query: 306 GGDMF-NLCLKALAVYGRLIVIG 327
           G      L L+A+  +GRL+++G
Sbjct: 240 GNTAARRLALEAVRPWGRLVLVG 262

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 12/175 (6%)

Query: 156 GFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPV-ARPDPEVVAMLTS 214
           G+ +VG +  VG  V   K G       FG +AE  +VP+  ++P+     PE  A+   
Sbjct: 25  GYSSVGRVVEVGSGVTGFKPGDRVF--CFGPHAERVVVPANLLVPLPDGLPPERAALTAL 82

Query: 215 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKEL 273
             TA   +  A P  G++V V    G  G  A QLAK AG   VV       + +L + L
Sbjct: 83  AATALNGVRDAEPRLGERVAVV-GLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEAL 141

Query: 274 GVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIG 327
           G    +     D      E   +G D++ E+ G        L+ L   GR++++G
Sbjct: 142 GPADPVAADTAD------EIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 70.6 bits (174), Expect = 1e-13
 Identities = 53/180 (29%), Positives = 78/180 (43%), Gaps = 30/180 (16%)

Query: 119 VLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA-------AVGDSV- 170
           V V++ +     S +N+  G   +    I    P   G +  G +          GD V 
Sbjct: 30  VTVEVHY-----STLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVESSSPRFKPGDRVV 84

Query: 171 -NNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDP----EVVAMLTSGLTAS---IAL 222
                VG       +G YA+   V +  ++P+  P+     + +A+ T+G TA    +AL
Sbjct: 85  LTGWGVGE----RHWGGYAQRARVKADWLVPL--PEGLSARQAMAIGTAGFTAMLCVMAL 138

Query: 223 EQAG--PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN 280
           E  G  P  G  VLVT AAGG G  AV L    G  VVA+ G   +A  L+ LG   +I+
Sbjct: 139 EDHGVTPGDGP-VLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 67/262 (25%), Positives = 103/262 (39%), Gaps = 60/262 (22%)

Query: 109 PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL 162
           PLRL         P  VL+K+   GV  +D++   G           +LP   G E VG 
Sbjct: 16  PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP------PKLPLIPGHEIVGR 69

Query: 163 IAAVGDSVNNVKVGTPAAI-----------------------MTF------GSYAEFTMV 193
           + AVG  V    VG    +                         F      G YAE+ + 
Sbjct: 70  VEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVA 129

Query: 194 PSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAK 251
             +   P+     D E   +L +G+    AL+ AG   G+++ +    G +   A+Q+A+
Sbjct: 130 DERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLY-GFGASAHLALQIAR 188

Query: 252 LAGNTVVA-TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFD--IIYESVGGD 308
             G  V A T  GEH+ +L +ELG D               +  P+  D  II+  V G 
Sbjct: 189 YQGAEVFAFTRSGEHQ-ELARELGADWAG---------DSDDLPPEPLDAAIIFAPV-GA 237

Query: 309 MFNLCLKALAVYGRLIV--IGM 328
           +    L+A+   GR+++  I M
Sbjct: 238 LVPAALRAVKKGGRVVLAGIHM 259

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 65/282 (23%), Positives = 100/282 (35%), Gaps = 70/282 (24%)

Query: 103 TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL 162
            + +  P     +   VLV+I   GV  +D +  SG       D     P   G E  G+
Sbjct: 19  EVDLDPP-----RAGEVLVRITATGVCHTDAHTLSG-------DDPEGFPAVLGHEGAGI 66

Query: 163 IAAVGDSVNNVKVG---------------------------------------------- 176
           + AVG+ V +VK G                                              
Sbjct: 67  VEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSG 126

Query: 177 ---TPAAIMTFGSYAEFTMVPSKHILPVARPD--PEVVAMLTSGLTASI--ALEQAGPAS 229
                   +   ++AE+T+V    ++ +  PD   E   +L  G+T  I   +  A    
Sbjct: 127 NGVPVYHYLGCSTFAEYTVVHEISLVKI-DPDAPLEKACLLGCGVTTGIGAVVNTAKVEP 185

Query: 230 GKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAE-DIK 287
           G  V V    GG G  A+Q AK AG   ++A      K +L K+ G    +N K   D+ 
Sbjct: 186 GDTVAV-FGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVV 244

Query: 288 TVFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
               E    G D  +E VG  ++    L+A    G  ++IG+
Sbjct: 245 EAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGV 286

Length = 366

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 5/158 (3%)

Query: 176 GTPAAIMTFGSYAEFTMVPSKHILPVA-RPDPEVVAMLT-SGLTASIALEQAGPASGKKV 233
           G P  + + G  AE+ +VP+  + P+    D    A+L  +G TA  AL+ A      + 
Sbjct: 131 GGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGET 190

Query: 234 LVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE 292
           +     GG G  A+QLAK  G + ++A    + K    KELG    +N   ED     +E
Sbjct: 191 VAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIRE 250

Query: 293 -EFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGM 328
               +G D++ E++G  + F L L  +   GR +V+G+
Sbjct: 251 ITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 70.2 bits (172), Expect = 3e-13
 Identities = 61/215 (28%), Positives = 85/215 (39%), Gaps = 43/215 (20%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFS--DGNDIGSR--LPFD-AGFEAVGLIAAVGD 168
           + P  VLV ++ AGVN ++V  + G   S         +  LPF   G +A G++  VG 
Sbjct: 35  LGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWRVGP 94

Query: 169 SVNNVKVGTPAAI-----------------MT------------FGSYAEFTMVPSKHIL 199
            V   KVG                      M             FGS+AEF +V    ++
Sbjct: 95  GVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLM 154

Query: 200 PVARPD----PEVVAMLTSGLTASIALEQAGPAS---GKKVLVTAAAGGTGQFAVQLAKL 252
           P  +P      E      +G TA   L    PA+   G  VL+  AAGG G +A QLA+ 
Sbjct: 155 P--KPKHLTWEEAACPGLTGATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARA 212

Query: 253 AGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
            G   VA      KA+  + LG + VI+       
Sbjct: 213 GGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDFGHW 247

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 71/298 (23%), Positives = 105/298 (35%), Gaps = 73/298 (24%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV-- 170
            ++P  VLV++  AGV  SDV+  +GR           LP   G E VG + A+G  V  
Sbjct: 22  DLEPGAVLVRVRLAGVCGSDVHTVAGR------RPRVPLPIILGHEGVGRVVALGGGVTT 75

Query: 171 ------------------------------------NNVKVG--TPAAIMTF-GSYAEFT 191
                                               N  K G           G YAE  
Sbjct: 76  DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHI 135

Query: 192 MVPSK-HILPVARPDPEVVAMLT--SGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 248
            +P    I+ V    P+ VA     +  T   AL++AGP      +V   AG  G +AV 
Sbjct: 136 YLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVA 195

Query: 249 LAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKA----EDIKTVFKEEFPKGFDIIYE 303
            AKLAG   V+   G   + +L +E G D  I+       +    V      +G D++ E
Sbjct: 196 AAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIE 255

Query: 304 SVGGDM-FNLCLKALAVYGRLIVIGMIS-----------------QYQGEHGWQPSNY 343
           + G        L+ L   G  +++G ++                    G H + PS+ 
Sbjct: 256 ASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHL 313

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 38/246 (15%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRL--PFDAGFEAVGLIAAVGDSVN 171
             P  VL+K++ A +  +DV+      ++      SR+  P   G E  G +  VG+ V 
Sbjct: 23  PGPGEVLIKVLAASICGTDVHIYEWDEWAQ-----SRIKPPLIFGHEFAGEVVEVGEGVT 77

Query: 172 NVKVGTPAA----------------------------IMTFGSYAEFTMVPSKHILPVAR 203
            VKVG   +                            + T G +AE+ +VP +++    +
Sbjct: 78  RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDK 137

Query: 204 PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCG 262
             P  +A +   L  ++    AG  SGK VL+T   G  G  A+ +AK AG + V+A+  
Sbjct: 138 DIPPEIASIQEPLGNAVHTVLAGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDP 196

Query: 263 GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM-FNLCLKALAVYG 321
             ++ +L K++G D VIN + ED+  V       G D++ E  G        LKAL   G
Sbjct: 197 NPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGG 256

Query: 322 RLIVIG 327
           R+ ++G
Sbjct: 257 RVSILG 262

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 67.6 bits (166), Expect = 1e-12
 Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 46/251 (18%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
           P  V V++   G+  SD++     Y+  G    +  R P   G E  G++ AVG  V  +
Sbjct: 21  PGEVRVRVAAGGICGSDLH-----YYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGL 75

Query: 174 KVGTPAAI----------------------MTF-----------GSYAEFTMVPSKHILP 200
             G   A+                      M F           G + E+ +V +   +P
Sbjct: 76  APGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVP 135

Query: 201 VARPDPEVVAMLTSGLTASI-ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVV 258
           +        A L   L  ++ A+ +AG  +GK+VLVT  AG  G   V  A+ AG   +V
Sbjct: 136 LPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVT-GAGPIGALVVAAARRAGAAEIV 194

Query: 259 ATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM-FNLCLKAL 317
           AT   +    + + +G D  +N   + +           FD+++E+ G        L+ +
Sbjct: 195 ATDLADAPLAVARAMGADETVNLARDPLAA--YAADKGDFDVVFEASGAPAALASALRVV 252

Query: 318 AVYGRLIVIGM 328
              G ++ +GM
Sbjct: 253 RPGGTVVQVGM 263

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 69/253 (27%), Positives = 100/253 (39%), Gaps = 46/253 (18%)

Query: 109 PLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGD 168
            + LP  P  VL+K+   GV  SD       +  +G   G   P   G E VG I AVG+
Sbjct: 19  DVPLP-GPGEVLIKVEACGVCHSDA------FVKEGAMPGLSYPRVPGHEVVGRIDAVGE 71

Query: 169 SVNNVKVGTPAAIMTFGS-----------------------------YAEFTMVPSKHIL 199
            V+  KVG    +   G                              YAE+ + P++ + 
Sbjct: 72  GVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALA 131

Query: 200 PVARP---DPEVVA-MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN 255
            +  P   D    A +L +G+T   AL  +G   G  V V    GG G  AVQ A   G 
Sbjct: 132 RI--PDDLDAAEAAPLLCAGVTTFNALRNSGAKPGDLVAVQGI-GGLGHLAVQYAAKMGF 188

Query: 256 TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCL 314
             VA   G  KA L ++LG    I+   ED+    +E    G  +I  +       +  +
Sbjct: 189 RTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL--GGAKLILATAPNAKAISALV 246

Query: 315 KALAVYGRLIVIG 327
             LA  G+L+++G
Sbjct: 247 GGLAPRGKLLILG 259

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 34/114 (29%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  VLV++  AG+  SD++   G           +LP   G E  G++  VG  V  +KV
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPP------PVKLPLILGHEGAGIVEEVGPGVTGLKV 54

Query: 176 GTPAAIMTF----------------------------GSYAEFTMVPSKHILPV 201
           G    +                               G +AE+ +VP+++++P+
Sbjct: 55  GDRVVVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 13/139 (9%)

Query: 156 GFEAVGLIAAVGDSVNNVKVGT----PAAIMTFGSYAEFTMVPSKHI--LPVARPDPEVV 209
           G++A G++ AVGD V   K G        I   GS AEF +V  + +   P +    E  
Sbjct: 63  GWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAA 122

Query: 210 AMLTSGLTA------SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCG 262
           A+  + +TA       + +        + +L+   AGG G   +QLA+ L G TV+AT  
Sbjct: 123 ALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATAS 182

Query: 263 GEHKAQLLKELGVDRVINY 281
                + + ELG   VI++
Sbjct: 183 RPESQEWVLELGAHHVIDH 201

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 35/246 (14%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  VL+K++   +  +DV+  +   ++       + P   G E  G +  +G  V  +
Sbjct: 21  PGPGEVLIKVLATSICGTDVHIYNWDEWAQSR---IKPPQVVGHEVAGEVVGIGPGVEGI 77

Query: 174 KVG-------------------------TPAAIM---TFGSYAEFTMVPSKHILPVARPD 205
           KVG                             I    T G +AE+ +VP+++I    +  
Sbjct: 78  KVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSI 137

Query: 206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGE 264
           P   A +   L  ++    AGP SGK VLVT  AG  G  A+ +AK +G   V+ +   E
Sbjct: 138 PPEYATIQEPLGNAVHTVLAGPISGKSVLVT-GAGPIGLMAIAVAKASGAYPVIVSDPNE 196

Query: 265 HKAQLLKELGVDRVINYKAEDI-KTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGR 322
           ++ +L K++G   V+N   ED+ K V      +G D+  E  G        L+A+   GR
Sbjct: 197 YRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGR 256

Query: 323 LIVIGM 328
           + ++G+
Sbjct: 257 VSLLGL 262

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 65/251 (25%), Positives = 92/251 (36%), Gaps = 44/251 (17%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  VLVK+   G+  +DV    G +         + P   G E  G I  VGD V   
Sbjct: 22  PGPGEVLVKVRACGICGTDVKKIRGGHT------DLKPPRILGHEIAGEIVEVGDGVTGF 75

Query: 174 KVG-----TPAA--------------------IMTF---GSYAEFTMVPSKHILP--VAR 203
           KVG      P                             G +AE+  VP+  +    V +
Sbjct: 76  KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLK 135

Query: 204 -PD--PEVVAMLTSGLTASI-ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
            PD      A L   L   I A  +AG   G  VLV  A G  G     LAK +G   V 
Sbjct: 136 LPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVI 194

Query: 260 TCG-GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVGG-DMFNLCLKA 316
                E + +  K+LG D  I+   ED+    +E    +G D++  + G  +     L+ 
Sbjct: 195 VSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALEL 254

Query: 317 LAVYGRLIVIG 327
           +   GR++  G
Sbjct: 255 VRKGGRILFFG 265

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 70/262 (26%), Positives = 100/262 (38%), Gaps = 62/262 (23%)

Query: 114 IKPNHVLVKIIFAGVNASDVNF-SSGRYFSDGNDIGS---RLPFDAGFEAVGLIAAVGDS 169
             P  VLV++   G+  SDV++   GR       IG    + P   G E+ G + AVG  
Sbjct: 20  PGPGEVLVRVRAVGICGSDVHYYKHGR-------IGDFVVKEPMVLGHESAGTVVAVGSG 72

Query: 170 VNNVKVGTPAAI----------------------MTF-------GSYAEFTMVPSK--HI 198
           V ++KVG   AI                      M F       G+   +   P+   H 
Sbjct: 73  VTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHK 132

Query: 199 LPVARPDPEVVAM---LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN 255
           LP      E  A+   L+ G+ A     +AG   G  VLV   AG  G     +AK  G 
Sbjct: 133 LP-DNVSLEEGALVEPLSVGVHAC---RRAGVRPGDTVLVF-GAGPIGLLTAAVAKAFGA 187

Query: 256 T-VVATCGGEHKAQLLKELGVDRVIN-------YKAEDIKTVFKEEFPKGFDIIYESVGG 307
           T VV T     + +  KELG    +N         AE I  +      KG D++ E  G 
Sbjct: 188 TKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGG---KGPDVVIECTGA 244

Query: 308 DM-FNLCLKALAVYGRLIVIGM 328
           +      + A    G ++++GM
Sbjct: 245 ESCIQTAIYATRPGGTVVLVGM 266

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 49/275 (17%)

Query: 89  KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
           K  V   +H      + V   LR P+K    LVK+ + GV  +D++ ++G +   G+  G
Sbjct: 2   KAAVVNKDH---TGDVVVEKTLR-PLKHGEALVKMEYCGVCHTDLHVANGDF---GDKTG 54

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------------------------ 184
             L    G E +G++  VG  V ++KVG   +I  F                        
Sbjct: 55  RIL----GHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNA 110

Query: 185 -----GSYAEFTMVPSKHILPVARP---DPEVVAMLT-SGLTASIALEQAGPASGKKVLV 235
                G  AE  +V + + + V  P   DP   + +T +G+T   A++ +G   G+ + +
Sbjct: 111 GYTVDGGMAEQCIVTADYAVKV--PEGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAI 168

Query: 236 TAAAGGTGQFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVIN-YKAEDIKTVFKEE 293
             A GG G  A+Q AK +    V+A    + K  L KE+G D  IN  + ED+  + +E+
Sbjct: 169 YGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEK 227

Query: 294 FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
                  +  +V    FN  + A+   GR++ +G+
Sbjct: 228 TGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGL 262

Length = 338

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 60.6 bits (148), Expect = 3e-10
 Identities = 73/294 (24%), Positives = 114/294 (38%), Gaps = 68/294 (23%)

Query: 90  LVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS 149
            VV      F    +++  P     +P+ VLV+I+  G+  +D+    G          +
Sbjct: 6   AVVREPGGPFVLEDVELDDP-----RPDEVLVRIVATGICHTDLVVRDGGL-------PT 53

Query: 150 RLPFDAGFEAVGLIAAVGDSVNNVKVG--------------------------------- 176
            LP   G E  G++ AVG +V  +K G                                 
Sbjct: 54  PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFS 113

Query: 177 ---------------TPAAIMTFG--SYAEFTMVPSKHILPVARPDP-EVVAMLTSGLT- 217
                          TP     FG  S+A + +V  ++++ V +  P E++A L  G+  
Sbjct: 114 GRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQT 173

Query: 218 -ASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGV 275
            A   L    P  G  + V  A G  G  AV  AK+AG  T++A    + + +L KELG 
Sbjct: 174 GAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA 232

Query: 276 DRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
             VIN K ED+    +E    G D   ++ G   +    + ALA  G L ++G 
Sbjct: 233 THVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGA 286

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 59.5 bits (145), Expect = 7e-10
 Identities = 67/294 (22%), Positives = 111/294 (37%), Gaps = 69/294 (23%)

Query: 91  VVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR 150
           V+H +        +++  P      P  VLV+I  AG+  SD++  +G       D+ + 
Sbjct: 5   VLHEVGKPLEIEEVELDDP-----GPGEVLVRIAAAGLCHSDLHVVTG-------DLPAP 52

Query: 151 LPFDAGFEAVGLIAAVGDSVNNVKVG--------------------------TPAAIMTF 184
           LP   G E  G++  VG  V  VK G                            A I+  
Sbjct: 53  LPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGG 112

Query: 185 ----------------------GSYAEFTMVPSKHILPVARPD--PEVVAMLTSGLTASI 220
                                 G++AE+T+VP   ++ +   D   +  A+L  G+T  +
Sbjct: 113 QLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKI-DDDIPLDRAALLGCGVTTGV 171

Query: 221 --ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDR 277
              +  A    G  V V    GG G  A+Q A++AG + ++A      K +L +  G   
Sbjct: 172 GAVVNTARVRPGDTVAV-IGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATH 230

Query: 278 VINYKAED-IKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMI 329
            +N   +D ++ V      +G D  +E+VG        L      G  +V+GM 
Sbjct: 231 TVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMG 284

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 59.4 bits (144), Expect = 8e-10
 Identities = 55/263 (20%), Positives = 91/263 (34%), Gaps = 76/263 (28%)

Query: 103 TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL 162
            I+V  P     K   V +K++  GV  +D++   G+         + LP   G E  G+
Sbjct: 17  EIEVAPP-----KAGEVRIKVVATGVCHTDLHVIDGKL-------PTPLPVILGHEGAGI 64

Query: 163 IAAVGDSVNNVKVGTPAAIMTFG------------------------------------- 185
           + ++G  V  +K G    I  FG                                     
Sbjct: 65  VESIGPGVTTLKPGDK-VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFT 123

Query: 186 -------------SYAEFTMVPSKHILPVARPDPEV----VAMLTSGLT--ASIALEQAG 226
                        ++AE+T+V       +A+ DP+     V ++  G +     A+  A 
Sbjct: 124 CKGKPIHHFLGTSTFAEYTVVSEIS---LAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAK 180

Query: 227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYK--A 283
              G    V    GG G   +   K AG + ++A    + K +  K+LG    IN +   
Sbjct: 181 VTPGSTCAVF-GLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239

Query: 284 EDIKTVFKEEFPKGFDIIYESVG 306
           + I  V  E    G D  +E +G
Sbjct: 240 KPIVEVLTEMTDGGVDYAFEVIG 262

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 60/255 (23%), Positives = 90/255 (35%), Gaps = 47/255 (18%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
              P+  +V++    +  SD++   G         G++     G E VG +  VG  V  
Sbjct: 22  IQGPHDAIVRVTATSICGSDLHIYRGGV------PGAKHGMILGHEFVGEVVEVGSDVKR 75

Query: 173 VKVG--------------------------TPAAIMTF-----GSYAEFTMVP----SKH 197
           +K G                                       G  AE+  VP    +  
Sbjct: 76  LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLA 135

Query: 198 ILPVARPDPEVVAMLTSGL-TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT 256
            +P   PD + + ML+  L T     E AG   G  V V   AG  G  AV  A+L G  
Sbjct: 136 KIPDGLPDEDAL-MLSDILPTGFHGAELAGIKPGSTVAV-IGAGPVGLCAVAGARLLGAA 193

Query: 257 VVATCG-GEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGG-DMFNLC 313
            +        +  L KE G   +IN K  DI     E    +G D + E+VG  + F   
Sbjct: 194 RIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQA 253

Query: 314 LKALAVYGRLIVIGM 328
           +K +   G +  +G+
Sbjct: 254 VKVVRPGGTIANVGV 268

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 63/252 (25%), Positives = 98/252 (38%), Gaps = 52/252 (20%)

Query: 117 NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS---RLPFDAGFEAVGLIAAVGDSVNNV 173
           N  LV+I   G+  SD++     Y+ +G  +G+   + P   G E +G I     S   +
Sbjct: 28  NGTLVQITRGGICGSDLH-----YYQEGK-VGNFVIKAPMVLGHEVIGKIVHSDSS--GL 79

Query: 174 KVGTPAAI----------------------MTF-----------GSYAEFTMVPSKHILP 200
           K G   AI                      M F           G +  + +V +   +P
Sbjct: 80  KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIP 139

Query: 201 VARPDPEVVAMLTSGLTASI-ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VV 258
                 E V      L  +I A  QAG   GK+V V+   G  G   V   K  G   +V
Sbjct: 140 YPEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVS-GVGPIGCLIVAAVKTLGAAEIV 198

Query: 259 ATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKG-FDIIYESVGG-DMFNLCLKA 316
                     L +E+G D+++N + +D+   +K E  KG FD+ +E  G     N CL+ 
Sbjct: 199 CADVSPRSLSLAREMGADKLVNPQNDDL-DHYKAE--KGYFDVSFEVSGHPSSINTCLEV 255

Query: 317 LAVYGRLIVIGM 328
               G ++ +GM
Sbjct: 256 TRAKGVMVQVGM 267

Length = 343

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 56.4 bits (137), Expect = 7e-09
 Identities = 60/253 (23%), Positives = 100/253 (39%), Gaps = 51/253 (20%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             PN VL+K+    +  +DV+  +   ++        +P   G E VG +  VG  V   
Sbjct: 23  PGPNDVLIKVKKTAICGTDVHIYNWDEWAQKT---IPVPMVVGHEFVGEVVEVGSEVTGF 79

Query: 174 KVG----------------------------------TPAAIMTFGSYAEFTMVPSKHIL 199
           KVG                                   P      G++AE+ ++P+ ++ 
Sbjct: 80  KVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRP------GAFAEYLVIPAFNVW 133

Query: 200 PVARP-DPEVVAMLTS-GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NT 256
            +      ++ A+    G     AL  +    G+ VL+T A G  G  A  +AK  G   
Sbjct: 134 KIPDDIPDDLAAIFDPFGNAVHTAL--SFDLVGEDVLITGA-GPIGIMAAAVAKHVGARH 190

Query: 257 VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK-GFDIIYESVG-GDMFNLCL 314
           VV T   E++ +L +++G  R +N   ED++ V  E     GFD+  E  G    F   L
Sbjct: 191 VVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQML 250

Query: 315 KALAVYGRLIVIG 327
             +   GR+ ++G
Sbjct: 251 DNMNHGGRIAMLG 263

Length = 341

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 56.3 bits (136), Expect = 7e-09
 Identities = 57/238 (23%), Positives = 89/238 (37%), Gaps = 56/238 (23%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  V+V I   GV  +D+++  G        I    PF  G EA G++ AVG+ V +V  
Sbjct: 26  PGEVIVDIQACGVCHTDLHYREG-------GINDEFPFLLGHEAAGVVEAVGEGVTDVAP 78

Query: 176 ----------------------------------------GTP-AAIMTFGSYAEFTMVP 194
                                                   GT  +  +  G++AE T+V 
Sbjct: 79  GDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVH 138

Query: 195 SKHILPV-ARPDPEVVAMLTSGLTASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAK 251
           +     V    DP    +L  G+ A +  A+   G   G  V V    GG G  A+  A 
Sbjct: 139 AGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVI-GCGGVGDAAIAGAA 197

Query: 252 LAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF--DIIYESVG 306
           LAG + ++A    + K +  +E G    +N    D     +     GF  D++ ++VG
Sbjct: 198 LAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIR-ALTGGFGADVVIDAVG 254

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 10/125 (8%)

Query: 185 GSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASI-ALEQAGPASGKKVLVTAAAGGTG 243
           G++AE+  +P +++  V    P+  A+    L A++  LEQ     G KV V    G  G
Sbjct: 110 GAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGD-GKLG 168

Query: 244 QFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYE 303
               Q+  L G  VV       K  L + LGV+ V+  +A        E    GFD++ E
Sbjct: 169 LLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEA--------ESEGGGFDVVVE 220

Query: 304 SVGGD 308
           + G  
Sbjct: 221 ATGSP 225

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 42/211 (19%)

Query: 156 GFEAVGLIAAVGDSVNNVKVGTPAAI-----------------------------MTFGS 186
           G E VG++  VG +V N KVG    I                             +  G+
Sbjct: 59  GHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGT 118

Query: 187 YAEFTMVP----SKHILPVARPDPEVVAMLTSGLTASIALE---QAGPASGKKVLVTAAA 239
            AE+  +P    S + LP    D E   ML+  L      E     G       +    A
Sbjct: 119 QAEYVRIPHADNSLYKLP-EGVDEEAAVMLSDIL--PTGYECGVLNGKVKPGDTVAIVGA 175

Query: 240 GGTGQFAVQLAKLAGNTVVATCG-GEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKG 297
           G  G  A+  A+L   + +      +++ ++ K+LG    +N    D I+ V +    +G
Sbjct: 176 GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG 235

Query: 298 FDIIYESVG-GDMFNLCLKALAVYGRLIVIG 327
            D++ E+VG    F LC + +A  G +  +G
Sbjct: 236 VDVVIEAVGIPATFELCQELVAPGGHIANVG 266

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 63/249 (25%), Positives = 93/249 (37%), Gaps = 51/249 (20%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           PN  +V+        SDV+   G         G R     G EAVG++  VG  V + K 
Sbjct: 24  PNDAIVRPTAVAPCTSDVHTVWGGA------PGERHGMILGHEAVGVVEEVGSEVKDFKP 77

Query: 176 G-------------TPAAIMTF------------------GSYAEFTMVPSKH----ILP 200
           G             + AA   +                  G +AE+  V         LP
Sbjct: 78  GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLP 137

Query: 201 VARPDPEVVA---MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NT 256
               D + V    M+++G   +   E A    G  V V    G  G  AV  A+L G   
Sbjct: 138 DGLTDEQAVMLPDMMSTGFHGA---ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGR 193

Query: 257 VVATCGGEHKAQLLKELGVDRVINYKAEDI-KTVFKEEFPKGFDIIYESVGG-DMFNLCL 314
           ++A     ++ +L KE G   +++YK  D+ + + K    KG D +  + GG D F   L
Sbjct: 194 IIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQAL 253

Query: 315 KALAVYGRL 323
           K L   G +
Sbjct: 254 KVLKPGGTI 262

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 273 LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           LG D VI+Y  ED     +    +G D++ ++VGG+     L AL   GRL+ IG
Sbjct: 1   LGADEVIDYTTED---FEEATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIG 52

Length = 129

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 49.9 bits (120), Expect = 8e-07
 Identities = 63/270 (23%), Positives = 96/270 (35%), Gaps = 55/270 (20%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P   +VK+  A +  SD++   G   S          F  G E VG +  VG  V  +KV
Sbjct: 25  PTDAIVKVTAAAICGSDLHIYRGHIPSTP-------GFVLGHEFVGEVVEVGPEVRTLKV 77

Query: 176 GT----PAAI-------------------MTF---------GSYAEFTMVPSKHILPVAR 203
           G     P  I                     F         G+ AE+  VP      +  
Sbjct: 78  GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKL 137

Query: 204 PD---PEVVAMLTSGL-TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVV 258
           PD    E   +L   L T     ++A    G  V V    G  G  AV  A++ G   V 
Sbjct: 138 PDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVI-GCGPVGLCAVLSAQVLGAARVF 196

Query: 259 ATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVGGD-MFNLCLKA 316
           A      + +    LG +  IN++  +     +E    +G D++ E+VGG    +L    
Sbjct: 197 AVDPVPERLERAAALGAE-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDL 255

Query: 317 LAVYGRLIVIGMISQYQGEHGWQPSNYPGL 346
           +   G +  +G+       H  +   +PGL
Sbjct: 256 VRPGGVISSVGV-------HTAEEFPFPGL 278

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 56/213 (26%), Positives = 81/213 (38%), Gaps = 47/213 (22%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
            + VLVK+  +G+  SD+     R F +G       P   G E  G + AVG  V+++  
Sbjct: 25  QDDVLVKVASSGLCGSDIP----RIFKNG---AHYYPITLGHEFSGYVEAVGSGVDDLHP 77

Query: 176 GTPAAIM----------------------------TFGSYAEFTMVPSKHI--LPVARP- 204
           G   A +                              G  AE+ +V  K++  LP   P 
Sbjct: 78  GDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPI 137

Query: 205 -DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCG 262
            D   +  +T GL A      A    GK V++  A G  G  A+Q A  L   +V A   
Sbjct: 138 EDGAFIEPITVGLHA---FHLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDI 193

Query: 263 GEHKAQLLKELGVDRVIN---YKAEDIKTVFKE 292
              K  L K LG  +  N     A  I++V +E
Sbjct: 194 NSEKLALAKSLGAMQTFNSREMSAPQIQSVLRE 226

Length = 347

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 44/249 (17%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSG-----RYFSDGNDIGSRLPFDAGFEAVGLIAAVG-DS 169
           P  VLVK++  G+  SD++ ++            + +        G E  G +   G  +
Sbjct: 23  PGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGT 82

Query: 170 VNNVKVGTPAAIMTF------------------GSYAEFTMVPSKHILPVARPDPEVVAM 211
              +KVGT    +                    G YAE+ ++    +L V    P+ ++M
Sbjct: 83  ERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRV----PDGLSM 138

Query: 212 LTSGLTASIA-----LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEH 265
             + LT  +A     + +A    G+  LV    G  G   +   K  G   +VA+     
Sbjct: 139 EDAALTEPLAVGLHAVRRARLTPGEVALVI-GCGPIGLAVIAALKARGVGPIVASDFSPE 197

Query: 266 KAQLLKELGVDRVINYKAEDIKTVFKEEF-----PKGFDIIYESVG--GDMFNLCLKALA 318
           +  L   +G D V++  A+     +  E      PK   +I+E VG  G +    ++   
Sbjct: 198 RRALALAMGADIVVDPAADSPFAAWAAELARAGGPKP-AVIFECVGAPGLIQQ-IIEGAP 255

Query: 319 VYGRLIVIG 327
             GR++V+G
Sbjct: 256 PGGRIVVVG 264

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 12/118 (10%)

Query: 185 GSYAEFTMVPSKHILPV-----ARPDPEV--VAMLTSGLTASI-ALEQAGPASGKKVLVT 236
           G +A   +VP+K +  V     A     +  V+++   +T    A  QAG   G  V+V 
Sbjct: 114 GGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVI 173

Query: 237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK---AEDIKTVFK 291
            A GG G + VQ AK  G  VVA      K +++K  G D  +N K   A ++K + K
Sbjct: 174 GA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIK 230

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 47.0 bits (112), Expect = 8e-06
 Identities = 64/272 (23%), Positives = 98/272 (36%), Gaps = 66/272 (24%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P  P  VLVKI  AG+  SD++  +G       D    LP   G EA G++  VG+ V +
Sbjct: 30  PPGPGEVLVKIAAAGLCHSDLSVING-------DRPRPLPMALGHEAAGVVVEVGEGVTD 82

Query: 173 VKVG-------------------------TPAA---------------------IMTF-- 184
           ++VG                          P A                     I     
Sbjct: 83  LEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLG 142

Query: 185 -GSYAEFTMVPSKHILPVARPDPEVVAML-----TSGLTASIALEQAGPASGKKVLVTAA 238
             ++AE+ +V  + ++ + +  P  +A L      +G+ A   +  AG   G+ V V   
Sbjct: 143 VSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGA--VVNTAGVRPGQSVAVVGL 200

Query: 239 AGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKG 297
            GG G  A+  A  AG + VVA    E K  L +ELG    +N    +     +E    G
Sbjct: 201 -GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGG 259

Query: 298 FDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
            D  +E  G         +     G  +  G+
Sbjct: 260 VDYAFEMAGSVPALETAYEITRRGGTTVTAGL 291

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 46.8 bits (111), Expect = 9e-06
 Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 54/255 (21%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG-SRLPFDAGFEAVGLIAAVGDSVNNVK 174
              V VKI++ GV  SD++       +  N+ G +R P   G E VG++  +G +V   K
Sbjct: 37  DEDVTVKILYCGVCHSDLH-------TIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFK 89

Query: 175 VG-------------------------TPAAIMT-----------FGSYAEFTMVPSKHI 198
            G                          P  I T           +G Y++  +V    +
Sbjct: 90  EGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFV 149

Query: 199 L--PVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT 256
           L  P   P      +L +G+T    ++  G     K L  A  GG G  AV++ K  G  
Sbjct: 150 LRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK 209

Query: 257 V-VATCGGEHKAQLLKELGVDR-VINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLC 313
           V V +     + + +  LG D  +++   E +K           D I ++V         
Sbjct: 210 VTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGT-----MDYIIDTVSAVHALGPL 264

Query: 314 LKALAVYGRLIVIGM 328
           L  L V G+LI +G+
Sbjct: 265 LGLLKVNGKLITLGL 279

Length = 360

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 57/271 (21%), Positives = 98/271 (36%), Gaps = 64/271 (23%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P K N V +K++   V  +D+    G   +         P   G E  G++ +VG+ V N
Sbjct: 24  PPKANEVRIKMLATSVCHTDILAIEGFKAT-------LFPVILGHEGAGIVESVGEGVTN 76

Query: 173 VKVG------------------------------TPAAIM------------------TF 184
           +K G                                + +M                    
Sbjct: 77  LKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGT 136

Query: 185 GSYAEFTMVPSKHILPV-ARPDPEVVAMLTSGLTASI--ALEQAGPASGKKVLVTAAAGG 241
            +++++T+V   ++  +      E V +L  G +     A   A    G  V V    G 
Sbjct: 137 STFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVF-GLGA 195

Query: 242 TGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYK--AEDIKTVFKEEFPKGF 298
            G  A+  AK+AG + ++     E K +  KE G    IN K   + +  V +E    G 
Sbjct: 196 VGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGV 255

Query: 299 DIIYESVG-GDMFNLCLKALAV-YGRLIVIG 327
           D  +E  G  D+ N  L++  + +G  +V+G
Sbjct: 256 DYSFECTGNADLMNEALESTKLGWGVSVVVG 286

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 44.6 bits (105), Expect = 5e-05
 Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 57/256 (22%)

Query: 117 NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG-SRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           N V VKI+F GV  SD++       +  N  G SR P   G E VG+   VG +V   K 
Sbjct: 32  NDVTVKILFCGVCHSDLH-------TIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKE 84

Query: 176 G-------------------------TPAAIMTF-----------GSYAEFTMVPSKHIL 199
           G                          P  + T+           G Y++  +V  + +L
Sbjct: 85  GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVL 144

Query: 200 --PVARPDPEVVAMLTSGLTASIALEQAGPA--SGKKVLVTAAAGGTGQFAVQLAKLAGN 255
             P   P      +L +G+T    ++  G    SGK++ V    GG G  AV++ K  G 
Sbjct: 145 SIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVN-GLGGLGHIAVKIGKAFGL 203

Query: 256 TV-VATCGGEHKAQLLKELGVDR-VINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLC 313
            V V +   E + + +  LG D  ++   ++ +K     E     D I ++V  +   L 
Sbjct: 204 RVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK-----EAVGTMDFIIDTVSAEHALLP 258

Query: 314 L-KALAVYGRLIVIGM 328
           L   L V G+L+ +G+
Sbjct: 259 LFSLLKVSGKLVALGL 274

Length = 375

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 68/278 (24%), Positives = 104/278 (37%), Gaps = 69/278 (24%)

Query: 110 LRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDS 169
           + +P +   VLV+I+  GV  +D       +   G D     P   G E  G++ AVG+ 
Sbjct: 21  VEMP-QKGEVLVRIVATGVCHTDA------FTLSGADPEGVFPVILGHEGAGIVEAVGEG 73

Query: 170 VNNVKVG-------TPAA------------------------------------------ 180
           V +VKVG       T                                             
Sbjct: 74  VTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYH 133

Query: 181 IMTFGSYAEFTMVPSKHILPVARPDP-EVVAMLTSGLTASIA--LEQAGPASGKKVLVTA 237
            M   +++E+T+VP   +  +    P E V +L  G+T  I   L  A    G  V V  
Sbjct: 134 YMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVF- 192

Query: 238 AAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAED--IKTVFKEEF 294
             GG G   +Q A++A  + ++A      K +L K+LG    +N    D  I+ V  E  
Sbjct: 193 GLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEIT 252

Query: 295 PKGFDIIYESVGGDMFNLCLKALAV----YGRLIVIGM 328
             G D  +E +G    N+   AL      +G  I+IG+
Sbjct: 253 DGGVDYSFECIGN--VNVMRAALECCHKGWGESIIIGV 288

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 64/263 (24%)

Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG-SRLPFDAGFEAVGLIAAVGDSVNNVK 174
           P  V++K+I+ G+  +D++          ND+G S  P   G E VG +  VG  V+   
Sbjct: 34  PEDVVIKVIYCGICHTDLHQIK-------NDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT 86

Query: 175 VGTPAAI------------------------------------MTFGSYAEFTMVPSKHI 198
           VG    +                                     T G +A   +V  K +
Sbjct: 87  VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFV 146

Query: 199 LPVARPD---PEVVA-MLTSGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAK 251
           + +  P+   PE  A +L +G+T    L   G         +L     GG G   V++AK
Sbjct: 147 VKI--PEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGIL---GLGGVGHMGVKIAK 201

Query: 252 LAGNTV-VATCGGEHKAQLLKELGVDR-VINYKAEDIKTVFKEEFPKGFDIIYESVGG-D 308
             G+ V V +   + + + L+ LG D  +++  A ++     +E     D I ++V    
Sbjct: 202 AMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEM-----QEAADSLDYIIDTVPVFH 256

Query: 309 MFNLCLKALAVYGRLIVIGMISQ 331
                L  L + G+LI++G+I+ 
Sbjct: 257 PLEPYLSLLKLDGKLILMGVINT 279

Length = 357

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 52/206 (25%), Positives = 78/206 (37%), Gaps = 40/206 (19%)

Query: 119 VLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP 178
           V VK+  AG+  SD +   G      N      P   G E  G+I AVG+ V+  ++G  
Sbjct: 27  VRVKVKLAGICGSDSHIYRGH-----NPFAK-YPRVIGHEFFGVIDAVGEGVDAARIGER 80

Query: 179 AAIMTF----------------------------GSYAEFTMVPSK--HILPVARPDPEV 208
            A+                               G ++E+ +VP+K  H +P A  D + 
Sbjct: 81  VAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIAD-QY 139

Query: 209 VAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHK 266
             M+     A+    + GP      L+  A G  G   VQ+ K   N   V+     + +
Sbjct: 140 AVMVEPFTIAANVTGRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRIDER 198

Query: 267 AQLLKELGVDRVINYKAEDIKTVFKE 292
             L KE G D VIN   E +    +E
Sbjct: 199 LALAKESGADWVINNAQEPLGEALEE 224

Length = 339

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 41.0 bits (97), Expect = 6e-04
 Identities = 54/249 (21%), Positives = 80/249 (32%), Gaps = 78/249 (31%)

Query: 156 GFEAVGLIAAVGDSVNNVKVG--------------------------------------- 176
           G E +G++  VG  V N+KVG                                       
Sbjct: 59  GHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYG 118

Query: 177 -TPAAIM----TFGSY----AEFTMVPSKHILPVARPD---PEVVAMLTSGL-TASIALE 223
              A I       G Y    AE+  VP   + P   PD    E    L+  L T   A E
Sbjct: 119 HAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAE 178

Query: 224 QAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYK 282
            A    G  V V    G  G FA + AKL G   V+A      + ++ +       IN++
Sbjct: 179 LAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE 237

Query: 283 AED-IKTVFKEEFP-KGFDIIYESVG----------------------GDMFNLCLKALA 318
             D +    +E    +G D+  ++VG                       D     ++A+ 
Sbjct: 238 EVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVR 297

Query: 319 VYGRLIVIG 327
             G + +IG
Sbjct: 298 KGGTVSIIG 306

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 9/161 (5%)

Query: 176 GTPAAIMT-FGSYAEFTMVPSKHILPVARPDP-EVVAMLTSGLTASI--ALEQAGPASGK 231
           G     M   G+++E+T+VP   ++ +    P +   ++  G+      A+  A    G 
Sbjct: 128 GQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGD 187

Query: 232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF 290
            V+V    GG G  AVQ A +AG   V+A    E K +   + G         E ++ V 
Sbjct: 188 TVVV-MGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFASMEEAVQLVR 246

Query: 291 KEEFPKGFDIIYESVG---GDMFNLCLKALAVYGRLIVIGM 328
           +    +G D    +VG   G+     L A    GR++V G+
Sbjct: 247 ELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGL 287

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 63/261 (24%), Positives = 97/261 (37%), Gaps = 61/261 (23%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRY--FSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN 171
             P  VLV+ +  GV  +D    +G Y     G D    L    G EA+G++  VGD   
Sbjct: 23  PTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGED---FLVL--GHEALGVVEEVGDGSG 77

Query: 172 -------------------NVKVGTP--AAIMTF---------GSYAEFTMVPSKHILPV 201
                              N ++G P       +         G   E+ +   ++++ V
Sbjct: 78  LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKV 137

Query: 202 ARPDPEV--VAMLTSGLT-ASIALEQA-------GPASGKKVLVTAAAGGTGQFAVQLAK 251
               P +  V +L   L+    A+EQA          + ++ LV  A G  G  A  L +
Sbjct: 138 ---PPSLADVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLR 193

Query: 252 LAG-NTVVATCG--GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD 308
           L G    V       + KA +++ELG    +N     +  V        FD+I E+ G  
Sbjct: 194 LRGFEVYVLNRRDPPDPKADIVEELGAT-YVNSSKTPVAEVKL---VGEFDLIIEATGVP 249

Query: 309 --MFNLCLKALAVYGRLIVIG 327
              F   L ALA  G +I+ G
Sbjct: 250 PLAFEA-LPALAPNGVVILFG 269

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 9/37 (24%), Positives = 15/37 (40%)

Query: 15  GFVPMEMVVKGAFELITDESKAGSCLWITNRRGMEYW 51
                E+V K    LI D+ K G+   +   + +E  
Sbjct: 208 PTQSPEVVAKAIVYLIEDDEKNGAIWIVDGGKLIEIE 244

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 45/209 (21%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS---RLPFDAGFEAVGLIAAVGDSV 170
           +KP+ +L+++   G+  SD++        DG  +       P   G E  G++   G +V
Sbjct: 49  LKPDEILIRVKACGICGSDIHLYETD--KDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106

Query: 171 NNVKVGTPAA-------------------------IMTF---GSYAEFTMVPSKH----- 197
            N + G P                            + F   G++AE+  V +++     
Sbjct: 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEIN 166

Query: 198 -ILPVARPDP--EVVAML--TSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKL 252
            +  +   D   E  A++  TS     + +   G   G  V+V   AG  G  A+ LAK 
Sbjct: 167 ELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVY-GAGPIGLAAIALAKA 225

Query: 253 AG-NTVVATCGGEHKAQLLKELGVDRVIN 280
           AG + V+A    E +  L KE+G D V N
Sbjct: 226 AGASKVIAFEISEERRNLAKEMGADYVFN 254

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 38.8 bits (91), Expect = 0.004
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 17/82 (20%)

Query: 193 VPSKHILPVARPDPEVVAMLT-------SGLTASIALEQA------GPASGKKVLVTAAA 239
           + + H LP++ P   V+A           G   + AL +A      GP SGK V+VT A 
Sbjct: 267 IKAGHWLPMSHPQ--VLAAAVAEFVDAVEGGPPARALLRARVGRPRGPFSGKLVVVTGAG 324

Query: 240 GGTGQ-FAVQLAKLAGNTVVAT 260
            G G+  A+  A+  G  VVA+
Sbjct: 325 SGIGRETALAFAR-EGAEVVAS 345

Length = 582

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	362
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.98
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.98
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.98
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.98
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.98
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.98
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.98
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.98
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.97
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.97
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.97
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.97
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.97
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.97
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.97
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.97
PLN02702	364	L-idonate 5-dehydrogenase	99.97
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.97
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.97
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.97
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.96
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.96
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.96
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.96
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.94
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.9
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.7
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.7
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.21
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.91
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.6
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.38
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.29
PRK05993	277	short chain dehydrogenase; Provisional	98.28
PRK05693	274	short chain dehydrogenase; Provisional	98.23
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.23
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.22
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.19
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.12
PRK06182	273	short chain dehydrogenase; Validated	98.12
PRK12742	237	oxidoreductase; Provisional	98.06
PRK08324	681	short chain dehydrogenase; Validated	98.05
PRK06139	330	short chain dehydrogenase; Provisional	98.04
PRK08265	261	short chain dehydrogenase; Provisional	98.03
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.03
PLN02494	477	adenosylhomocysteinase	98.03
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.03
PRK05872	296	short chain dehydrogenase; Provisional	98.02
PRK08339	263	short chain dehydrogenase; Provisional	98.01
PRK07060	245	short chain dehydrogenase; Provisional	97.99
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.98
PRK07109	334	short chain dehydrogenase; Provisional	97.95
PRK06128	300	oxidoreductase; Provisional	97.93
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.93
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.92
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.9
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.9
PRK06180	277	short chain dehydrogenase; Provisional	97.9
PRK07576	264	short chain dehydrogenase; Provisional	97.89
PRK06500	249	short chain dehydrogenase; Provisional	97.89
PRK07814	263	short chain dehydrogenase; Provisional	97.88
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.88
PRK07825	273	short chain dehydrogenase; Provisional	97.88
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.88
PRK06484	520	short chain dehydrogenase; Validated	97.87
PRK07831	262	short chain dehydrogenase; Provisional	97.87
PRK08017	256	oxidoreductase; Provisional	97.87
PRK07062	265	short chain dehydrogenase; Provisional	97.85
PRK06101	240	short chain dehydrogenase; Provisional	97.85
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.85
PRK09291	257	short chain dehydrogenase; Provisional	97.83
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.83
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.82
PRK12939	250	short chain dehydrogenase; Provisional	97.82
PRK12828	239	short chain dehydrogenase; Provisional	97.82
PRK07832	272	short chain dehydrogenase; Provisional	97.81
PRK08589	272	short chain dehydrogenase; Validated	97.81
PRK06398	258	aldose dehydrogenase; Validated	97.81
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.8
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.8
PRK05876	275	short chain dehydrogenase; Provisional	97.8
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.79
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.79
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.78
PRK08267	260	short chain dehydrogenase; Provisional	97.78
PRK06841	255	short chain dehydrogenase; Provisional	97.78
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.77
PRK12747	252	short chain dehydrogenase; Provisional	97.77
PRK08263	275	short chain dehydrogenase; Provisional	97.76
PRK09242	257	tropinone reductase; Provisional	97.76
PRK07063	260	short chain dehydrogenase; Provisional	97.75
PRK08628	258	short chain dehydrogenase; Provisional	97.75
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.74
PRK07326	237	short chain dehydrogenase; Provisional	97.74
PRK07985	294	oxidoreductase; Provisional	97.74
PRK07890	258	short chain dehydrogenase; Provisional	97.73
PRK07904	253	short chain dehydrogenase; Provisional	97.73
PRK07677	252	short chain dehydrogenase; Provisional	97.73
PRK07478	254	short chain dehydrogenase; Provisional	97.73
PRK06484	520	short chain dehydrogenase; Validated	97.73
PRK06198	260	short chain dehydrogenase; Provisional	97.73
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.72
PRK10538	248	malonic semialdehyde reductase; Provisional	97.71
PRK08862	227	short chain dehydrogenase; Provisional	97.71
PRK06949	258	short chain dehydrogenase; Provisional	97.7
PRK05717	255	oxidoreductase; Validated	97.7
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.69
PRK07454	241	short chain dehydrogenase; Provisional	97.69
PRK08643	256	acetoin reductase; Validated	97.69
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.68
PRK07791	286	short chain dehydrogenase; Provisional	97.68
PRK06914	280	short chain dehydrogenase; Provisional	97.68
PRK07806	248	short chain dehydrogenase; Provisional	97.68
PRK12743	256	oxidoreductase; Provisional	97.68
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.68
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.68
PRK06194	287	hypothetical protein; Provisional	97.67
PRK12829	264	short chain dehydrogenase; Provisional	97.67
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.67
PRK06701	290	short chain dehydrogenase; Provisional	97.67
PLN03209	576	translocon at the inner envelope of chloroplast su	97.66
PRK07856	252	short chain dehydrogenase; Provisional	97.65
PRK07067	257	sorbitol dehydrogenase; Provisional	97.65
PRK06179	270	short chain dehydrogenase; Provisional	97.65
PRK05884	223	short chain dehydrogenase; Provisional	97.65
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.64
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.64
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.64
PLN02780	320	ketoreductase/ oxidoreductase	97.64
PRK06181	263	short chain dehydrogenase; Provisional	97.63
PRK06057	255	short chain dehydrogenase; Provisional	97.63
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.62
PRK05854	313	short chain dehydrogenase; Provisional	97.62
PRK12937	245	short chain dehydrogenase; Provisional	97.62
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.62
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.62
PRK08177	225	short chain dehydrogenase; Provisional	97.62
PRK07024	257	short chain dehydrogenase; Provisional	97.61
PRK05875	276	short chain dehydrogenase; Provisional	97.61
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.6
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.59
PRK05866	293	short chain dehydrogenase; Provisional	97.58
PRK06196	315	oxidoreductase; Provisional	97.57
PRK06483	236	dihydromonapterin reductase; Provisional	97.56
PRK06172	253	short chain dehydrogenase; Provisional	97.56
PRK08703	239	short chain dehydrogenase; Provisional	97.56
PRK07035	252	short chain dehydrogenase; Provisional	97.56
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.56
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.56
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.55
PRK09072	263	short chain dehydrogenase; Provisional	97.55
PLN02253	280	xanthoxin dehydrogenase	97.55
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.55
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.55
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.54
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	97.53
PRK06125	259	short chain dehydrogenase; Provisional	97.52
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.52
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.52
PRK07097	265	gluconate 5-dehydrogenase; Provisional	97.51
PRK06114	254	short chain dehydrogenase; Provisional	97.51
PRK06138	252	short chain dehydrogenase; Provisional	97.51
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.5
PRK06482	276	short chain dehydrogenase; Provisional	97.5
PRK12746	254	short chain dehydrogenase; Provisional	97.5
KOG0725	270	consensus Reductases with broad range of substrate	97.5
PRK09186	256	flagellin modification protein A; Provisional	97.5
PRK05867	253	short chain dehydrogenase; Provisional	97.49
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.48
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.47
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.46
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.46
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.45
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.45
PRK05855	582	short chain dehydrogenase; Validated	97.44
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.44
PRK12935	247	acetoacetyl-CoA reductase; Provisional	97.44
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.43
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.43
PRK08264	238	short chain dehydrogenase; Validated	97.42
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.41
PRK07069	251	short chain dehydrogenase; Validated	97.41
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.39
PRK08936	261	glucose-1-dehydrogenase; Provisional	97.38
PRK05650	270	short chain dehydrogenase; Provisional	97.37
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.37
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.36
PRK07774	250	short chain dehydrogenase; Provisional	97.36
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.36
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.36
PRK06523	260	short chain dehydrogenase; Provisional	97.36
PRK08278	273	short chain dehydrogenase; Provisional	97.35
PRK07102	243	short chain dehydrogenase; Provisional	97.35
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.35
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.34
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.33
PRK07023	243	short chain dehydrogenase; Provisional	97.31
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.31
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.3
PRK06197	306	short chain dehydrogenase; Provisional	97.29
PRK08226	263	short chain dehydrogenase; Provisional	97.29
PRK07775	274	short chain dehydrogenase; Provisional	97.28
PRK08251	248	short chain dehydrogenase; Provisional	97.28
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	97.28
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.28
PRK06953	222	short chain dehydrogenase; Provisional	97.27
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.27
PRK08219	227	short chain dehydrogenase; Provisional	97.26
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.26
PRK07578	199	short chain dehydrogenase; Provisional	97.23
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.23
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	97.23
PRK05599	246	hypothetical protein; Provisional	97.22
PRK12824	245	acetoacetyl-CoA reductase; Provisional	97.21
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	97.19
PRK12367	245	short chain dehydrogenase; Provisional	97.18
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	97.16
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	97.16
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.15
TIGR02415	254	23BDH acetoin reductases. One member of this famil	97.14
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.13
PRK07201	657	short chain dehydrogenase; Provisional	97.1
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.1
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.1
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.09
PRK06940	275	short chain dehydrogenase; Provisional	97.08
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.08
CHL00194	317	ycf39 Ycf39; Provisional	97.08
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.07
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.07
PRK12744	257	short chain dehydrogenase; Provisional	97.07
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.05
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	97.05
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.05
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	97.04
PRK07577	234	short chain dehydrogenase; Provisional	97.04
PRK06720	169	hypothetical protein; Provisional	97.01
PRK07041	230	short chain dehydrogenase; Provisional	96.99
PRK12827	249	short chain dehydrogenase; Provisional	96.98
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.98
PRK08303	305	short chain dehydrogenase; Provisional	96.96
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.96
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.88
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.85
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	96.85
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.84
PRK09135	249	pteridine reductase; Provisional	96.83
COG2910	211	Putative NADH-flavin reductase [General function p	96.81
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.81
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.79
PRK09134	258	short chain dehydrogenase; Provisional	96.79
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.73
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.73
PRK07074	257	short chain dehydrogenase; Provisional	96.69
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.69
PLN00016	378	RNA-binding protein; Provisional	96.68
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	96.64
PRK06924	251	short chain dehydrogenase; Provisional	96.63
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.63
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.6
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.59
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.57
KOG1208	314	consensus Dehydrogenases with different specificit	96.56
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.47
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.45
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.45
PLN00015	308	protochlorophyllide reductase	96.44
PRK04148	134	hypothetical protein; Provisional	96.43
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.41
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	96.41
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	96.41
PRK06123	248	short chain dehydrogenase; Provisional	96.41
COG4122	219	Predicted O-methyltransferase [General function pr	96.41
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.32
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	96.3
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.23
PLN02214	342	cinnamoyl-CoA reductase	96.23
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	96.23
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.21
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.2
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	96.14
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.1
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.09
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	96.08
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.07
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.07
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.04
PLN02240	352	UDP-glucose 4-epimerase	96.03
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.03
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.02
PRK00811	283	spermidine synthase; Provisional	96.0
TIGR00438	188	rrmJ cell division protein FtsJ.	96.0
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.99
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	95.94
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.94
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	95.94
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.93
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.9
PLN02366	308	spermidine synthase	95.85
PRK10675	338	UDP-galactose-4-epimerase; Provisional	95.8
PLN02653	340	GDP-mannose 4,6-dehydratase	95.8
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.8
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	95.79
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.78
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.76
PLN02476	278	O-methyltransferase	95.75
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	95.75
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.74
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	95.72
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	95.72
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	95.7
PLN02686	367	cinnamoyl-CoA reductase	95.7
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.68
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.64
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.62
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.61
PLN02695	370	GDP-D-mannose-3',5'-epimerase	95.61
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.6
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.6
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.57
PRK11207	197	tellurite resistance protein TehB; Provisional	95.55
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.54
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.51
PLN02589	247	caffeoyl-CoA O-methyltransferase	95.48
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	95.48
COG1028	251	FabG Dehydrogenases with different specificities (	95.44
PRK08618	325	ornithine cyclodeaminase; Validated	95.44
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.43
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	95.4
PRK14967	223	putative methyltransferase; Provisional	95.4
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.38
PLN03139	386	formate dehydrogenase; Provisional	95.36
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.34
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.34
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.33
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.32
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.31
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	95.3
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.3
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.29
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.28
PLN02572	442	UDP-sulfoquinovose synthase	95.27
PLN00198	338	anthocyanidin reductase; Provisional	95.25
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.21
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.2
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	95.16
PLN02427	386	UDP-apiose/xylose synthase	95.16
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.13
PRK08317	241	hypothetical protein; Provisional	95.13
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.1
PRK01581	374	speE spermidine synthase; Validated	95.1
PRK07574	385	formate dehydrogenase; Provisional	95.08
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.06
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.02
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.02
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.01
PLN02928	347	oxidoreductase family protein	95.01
PRK08655	437	prephenate dehydrogenase; Provisional	94.98
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.96
PRK07340	304	ornithine cyclodeaminase; Validated	94.94
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.93
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.9
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.86
PRK07417	279	arogenate dehydrogenase; Reviewed	94.85
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.82
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.82
PLN02650	351	dihydroflavonol-4-reductase	94.8
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.79
PRK07402	196	precorrin-6B methylase; Provisional	94.75
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.73
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.72
PRK13243	333	glyoxylate reductase; Reviewed	94.71
PLN02244	340	tocopherol O-methyltransferase	94.69
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.69
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.65
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.65
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	94.64
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.63
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	94.61
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.61
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.59
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	94.55
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.55
PRK04457	262	spermidine synthase; Provisional	94.55
PRK00536	262	speE spermidine synthase; Provisional	94.53
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	94.53
PLN02260	668	probable rhamnose biosynthetic enzyme	94.49
PLN02583	297	cinnamoyl-CoA reductase	94.49
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	94.47
PLN02823	336	spermine synthase	94.44
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.44
PLN00203	519	glutamyl-tRNA reductase	94.42
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	94.36
PLN03075	296	nicotianamine synthase; Provisional	94.35
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.29
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.28
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.26
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	94.23
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	94.22

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.5e-44  Score=338.96  Aligned_cols=259  Identities=39%  Similarity=0.514  Sum_probs=229.5

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++..+.+. . +++++.|.| .++++||+|||+++|||+.|+++..|..+     ...++|+++|.|++|+|+++
T Consensus         1 mka~~~~~~g~~~-~-l~~~e~~~P-~p~~geVlVrV~a~gvN~~D~~~r~G~~~-----~~~~~P~i~G~d~aG~V~av   72 (326)
T COG0604           1 MKAVVVEEFGGPE-V-LKVVEVPEP-EPGPGEVLVRVKAAGVNPIDVLVRQGLAP-----PVRPLPFIPGSEAAGVVVAV   72 (326)
T ss_pred             CeEEEEeccCCCc-e-eEEEecCCC-CCCCCeEEEEEEEeecChHHHHhccCCCC-----CCCCCCCcccceeEEEEEEe
Confidence            6888888877542 2 899999999 79999999999999999999999999722     13568999999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCC
Q 018013          167 GDSVNNVKVGTPAAIM----TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAA  239 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~  239 (362)
                      |++|+.|++||+|+..    .+|+|+||+++|++.++++|++  +.++|+++..++|||++|..... ++|++|||+||+
T Consensus        73 G~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaa  152 (326)
T COG0604          73 GSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAA  152 (326)
T ss_pred             CCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCC
Confidence            9999999999999998    4799999999999999999984  78899999999999999999777 999999999999


Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC-CceeEEEECCChHHHHHHHHHhc
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVGGDMFNLCLKALA  318 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~-~g~Dvvid~~g~~~~~~~~~~l~  318 (362)
                      |++|.+++|+||++|+++++++++++|.++++++|++++++|++.++.+.+++.++ +++|+|||++|++.+..++++|+
T Consensus       153 GgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~  232 (326)
T COG0604         153 GGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA  232 (326)
T ss_pred             chHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence            99999999999999988888888888888999999999999999999998887665 58999999999999999999999


Q ss_pred             cCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          319 VYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       319 ~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++|+++.+|..++ .....++       ...++.++++++|++
T Consensus       233 ~~G~lv~ig~~~g-~~~~~~~-------~~~~~~~~~~~~g~~  267 (326)
T COG0604         233 PGGRLVSIGALSG-GPPVPLN-------LLPLLGKRLTLRGVT  267 (326)
T ss_pred             cCCEEEEEecCCC-CCccccC-------HHHHhhccEEEEEec
Confidence            9999999999996 2211111       235778888888875

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=6.1e-45  Score=334.90  Aligned_cols=253  Identities=30%  Similarity=0.436  Sum_probs=225.3

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEE
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      +.+|||++++..+.+    +++.+++.| +|+++||+|+|.|+|+|++|++.+.|.++      ...+|+++|||.+|+|
T Consensus         1 ~~~mkA~~~~~~~~p----l~i~e~~~p-~p~~~eVlI~v~~~GVChsDlH~~~G~~~------~~~~P~ipGHEivG~V   69 (339)
T COG1064           1 MMTMKAAVLKKFGQP----LEIEEVPVP-EPGPGEVLIKVEACGVCHTDLHVAKGDWP------VPKLPLIPGHEIVGTV   69 (339)
T ss_pred             CcceEEEEEccCCCC----ceEEeccCC-CCCCCeEEEEEEEEeecchhhhhhcCCCC------CCCCCccCCcceEEEE
Confidence            457999999988865    889999999 99999999999999999999999999876      3559999999999999


Q ss_pred             EEeCCCCCCCCCCCeEEE-ec----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhh
Q 018013          164 AAVGDSVNNVKVGTPAAI-MT----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAML  212 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~-~~----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~  212 (362)
                      +++|++|++|++||||.+ +.                            +|+|+||+++|+++++++|++  +..+|+++
T Consensus        70 ~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApll  149 (339)
T COG1064          70 VEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLL  149 (339)
T ss_pred             EEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhh
Confidence            999999999999999987 31                            499999999999999999995  67788899


Q ss_pred             hhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHH
Q 018013          213 TSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE  292 (362)
Q Consensus       213 ~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~  292 (362)
                      +++.|.|.+|.+...+||++|+|+| .||+|.+++|+|+.+|++|++++++++|.+.++++|++++++.++++..+.++.
T Consensus       150 CaGiT~y~alk~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~  228 (339)
T COG1064         150 CAGITTYRALKKANVKPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE  228 (339)
T ss_pred             cCeeeEeeehhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHh
Confidence            9999999999996669999999999 679999999999999999999999999999999999999999887666666554


Q ss_pred             HCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc-cccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          293 EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS-QYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       293 ~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .    +|+++|+++...++.++++|+++|+++.+|.+. .....  .+       ...++.|+++|.|+.
T Consensus       229 ~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~--~~-------~~~li~~~~~i~GS~  285 (339)
T COG1064         229 I----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPL--LP-------AFLLILKEISIVGSL  285 (339)
T ss_pred             h----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCC--CC-------HHHhhhcCeEEEEEe
Confidence            3    999999999889999999999999999999986 32221  11       235899999999975

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=5.3e-43  Score=301.81  Aligned_cols=250  Identities=34%  Similarity=0.496  Sum_probs=231.7

Q ss_pred             cCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceE
Q 018013           81 VQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAV  160 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~  160 (362)
                      ..+|...++++++..+..  +.+++++.|.| +|+|+|+.||..|+|+|+.|.++..|.|.      ..+.|+++|.|.+
T Consensus         3 ~~~p~~~k~i~v~e~Ggy--dvlk~ed~pv~-~papgel~iknka~GlNfid~y~RkGlY~------~~plPytpGmEaa   73 (336)
T KOG1197|consen    3 AASPPLLKCIVVTEFGGY--DVLKLEDRPVP-PPAPGELTIKNKACGLNFIDLYFRKGLYD------PAPLPYTPGMEAA   73 (336)
T ss_pred             CCCCchheEEEEeccCCc--ceEEEeeecCC-CCCCCceEEeehhcCccHHHHHHhccccC------CCCCCcCCCcccc
Confidence            356888899999988753  67999999999 99999999999999999999999999883      3678999999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEEe-cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEE
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIM-TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVT  236 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~-~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~  236 (362)
                      |+|+++|++|+++++||||+.. ++|.|+++..+|...+.++|+.  +..+|++...++|||.-+++..+ ++|++||+|
T Consensus        74 GvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvh  153 (336)
T KOG1197|consen   74 GVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVH  153 (336)
T ss_pred             eEEEEecCCccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            9999999999999999999876 4699999999999999999985  67888999999999999999999 999999999


Q ss_pred             cCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHH
Q 018013          237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLK  315 (362)
Q Consensus       237 ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~  315 (362)
                      .|+||+|++++|+++..|+++|+++++.+|.+.+++.|+.|.+++..+|+.+.+...+ ++|+|+++|++|.+.+..++.
T Consensus       154 aAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~  233 (336)
T KOG1197|consen  154 AAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLA  233 (336)
T ss_pred             eccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHH
Confidence            9999999999999999999999999999999999999999999999999988887765 899999999999999999999


Q ss_pred             HhccCCEEEEEcCcccccCCCCCC
Q 018013          316 ALAVYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       316 ~l~~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      +|++.|.+|.+|..++-.+..+|.
T Consensus       234 ~Lk~~G~mVSfG~asgl~~p~~l~  257 (336)
T KOG1197|consen  234 ALKPMGKMVSFGNASGLIDPIPLN  257 (336)
T ss_pred             HhccCceEEEeccccCCCCCeehh
Confidence            999999999999999877765554

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-39  Score=289.52  Aligned_cols=258  Identities=24%  Similarity=0.284  Sum_probs=220.6

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .+|+|+++...+.     +++++.|.|+...|+||+|++.++|||++|+|++........   -.+.|.++|||.+|+|.
T Consensus         3 ~~~~A~vl~g~~d-----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~---v~k~PmvlGHEssGiV~   74 (354)
T KOG0024|consen    3 ADNLALVLRGKGD-----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDF---VVKKPMVLGHESSGIVE   74 (354)
T ss_pred             cccceeEEEccCc-----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCcc---ccccccccccccccchh
Confidence            4689999998774     899999999666999999999999999999998876544322   35689999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhh
Q 018013          165 AVGDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTS  214 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~  214 (362)
                      ++|+.|+++++||||+.-+                             +|++++|++.++++|+|+|++ +.++.++..+
T Consensus        75 evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP  154 (354)
T KOG0024|consen   75 EVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP  154 (354)
T ss_pred             hhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc
Confidence            9999999999999998742                             399999999999999999997 7888899999


Q ss_pred             HHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCc----cHHHH
Q 018013          215 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAE----DIKTV  289 (362)
Q Consensus       215 ~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~----~~~~~  289 (362)
                      ++++|+|.+....++|.+|||+| +|++|+.+...||.+|| +|++++-.++|++.++++|++.+.+....    ++.+.
T Consensus       155 LsV~~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~  233 (354)
T KOG0024|consen  155 LSVGVHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAEL  233 (354)
T ss_pred             hhhhhhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHH
Confidence            99999999988889999999999 79999999999999999 99999999999999999999988776552    33444


Q ss_pred             HHHHCC-CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          290 FKEEFP-KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       290 ~~~~~~-~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++...+ ..+|+.|||+|. ..++.++.+++.+|+++..|.-......   ++       ..+..|+++++|.+
T Consensus       234 v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~f---pi-------~~v~~kE~~~~g~f  297 (354)
T KOG0024|consen  234 VEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQF---PI-------IDVALKEVDLRGSF  297 (354)
T ss_pred             HHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCcccc---Ch-------hhhhhheeeeeeee
Confidence            554444 569999999995 6789999999999999888876654442   21       14778888888865

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.5e-39  Score=286.01  Aligned_cols=260  Identities=24%  Similarity=0.347  Sum_probs=223.7

Q ss_pred             cCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceE
Q 018013           81 VQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAV  160 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~  160 (362)
                      ..+|.+.++|.++.++.-  ...++.+++.| +++++||+|++.|+|||++|++.+.|.++      ..++|+++|||.+
T Consensus         4 ~~~p~k~~g~~~~~~~G~--l~p~~~~~~~~-~~g~~dv~vkI~~cGIChsDlH~~~gdwg------~s~~PlV~GHEia   74 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGV--LSPEVFSFPVR-EPGENDVLVKIEYCGVCHSDLHAWKGDWG------LSKYPLVPGHEIA   74 (360)
T ss_pred             ccCchhhEEEEEECCCCC--CCcceeEcCCC-CCCCCcEEEEEEEEeccchhHHHhhccCC------cccCCccCCceee
Confidence            467899999999987752  23566888888 99999999999999999999999999875      3789999999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEEe------------------------------------cCCCeeeEEEeeCCCeeeCCCC
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIM------------------------------------TFGSYAEFTMVPSKHILPVARP  204 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~------------------------------------~~g~~~~~~~v~~~~~~~ip~~  204 (362)
                      |+|+++|++|++|++||||-+=                                    +.|+|++|+++++.+++++|++
T Consensus        75 G~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~  154 (360)
T KOG0023|consen   75 GVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPEN  154 (360)
T ss_pred             EEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCC
Confidence            9999999999999999999641                                    0267999999999999999995


Q ss_pred             --CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHHHHHHcCCcEEEeC
Q 018013          205 --DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQLLKELGVDRVINY  281 (362)
Q Consensus       205 --~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~~l~~~g~~~v~~~  281 (362)
                        .+.+|++++++.|.|.+|....-.||+++.|.|+ ||+|.+++|+||++|.+|++++++.. |.+.++.+|++..++.
T Consensus       155 ~pl~~aAPlLCaGITvYspLk~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~  233 (360)
T KOG0023|consen  155 LPLASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDS  233 (360)
T ss_pred             CChhhccchhhcceEEeehhHHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEe
Confidence              6788899999999999999888899999999994 66999999999999999999999884 5555678999988888


Q ss_pred             C-CccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          282 K-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       282 ~-~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      . +.++.+.+..++..++|-|.+. ....+..++.+|+.+|++|.+|.+..+-..   .+.       .++.++++|.|+
T Consensus       234 ~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~---~~~-------~lil~~~~I~GS  302 (360)
T KOG0023|consen  234 TEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEKPLKL---DTF-------PLILGRKSIKGS  302 (360)
T ss_pred             cCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCCcccc---cch-------hhhcccEEEEee
Confidence            7 7888888888888888888877 556788999999999999999999873331   111       277889999886


Q ss_pred             c
Q 018013          361 H  361 (362)
Q Consensus       361 ~  361 (362)
                      .
T Consensus       303 ~  303 (360)
T KOG0023|consen  303 I  303 (360)
T ss_pred             c
Confidence            3

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.9e-37  Score=296.55  Aligned_cols=258  Identities=23%  Similarity=0.294  Sum_probs=218.3

Q ss_pred             ceEEEEeccCCC----ccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           87 FEKLVVHTLNHN----FRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        87 ~~a~~~~~~~~~----~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      |||+++...+.+    ..+.+++++.+.| +++++||+|||.++|||++|++++.|.++       ..+|.++|||++|+
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P-~~~~~evlV~v~~~gi~~~D~~~~~g~~~-------~~~p~i~GhE~~G~   72 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELD-PPGPGEVLVKIAAAGLCHSDLSVINGDRP-------RPLPMALGHEAAGV   72 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecC-CCCCCeEEEEEEEEeeCccchHhhcCCCC-------CCCCccCCccceeE
Confidence            788888876631    1356889999999 78999999999999999999999988652       34688999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEe
Q 018013          163 IAAVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMV  193 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v  193 (362)
                      |+++|++|++|++||+|++..                                                 .|+|+||+++
T Consensus        73 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v  152 (371)
T cd08281          73 VVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVV  152 (371)
T ss_pred             EEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEe
Confidence            999999999999999998631                                                 2689999999


Q ss_pred             eCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHH
Q 018013          194 PSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQL  269 (362)
Q Consensus       194 ~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~  269 (362)
                      |+..++++|++  +.+++.++.+++|||+++..... ++|++|+|+| +|++|++++|+|+..|+ +|++++.+++|++.
T Consensus       153 ~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~  231 (371)
T cd08281         153 SRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLAL  231 (371)
T ss_pred             cccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHH
Confidence            99999999985  45666777889999999877666 9999999998 69999999999999999 69999999999999


Q ss_pred             HHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHH
Q 018013          270 LKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCE  348 (362)
Q Consensus       270 l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~  348 (362)
                      ++++|+++++++.++++.+.++...++++|++|||+|. ..++.++++++++|+++.+|..+.... ..+       ...
T Consensus       232 a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~-~~~-------~~~  303 (371)
T cd08281         232 ARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEAR-LSV-------PAL  303 (371)
T ss_pred             HHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCce-eee-------cHH
Confidence            99999999999988777776766655589999999985 688999999999999999998653211 111       123


Q ss_pred             HHHhcCeEEEEec
Q 018013          349 KILAKSQTVVCIH  361 (362)
Q Consensus       349 ~~~~k~~~i~G~~  361 (362)
                      .++.|+++|+|++
T Consensus       304 ~~~~~~~~i~g~~  316 (371)
T cd08281         304 SLVAEERTLKGSY  316 (371)
T ss_pred             HHhhcCCEEEEEe
Confidence            5888999999975

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=5.2e-38  Score=283.35  Aligned_cols=236  Identities=26%  Similarity=0.326  Sum_probs=213.9

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      .+++++...++.+    ++++++.++ +|+++||+||+.++|+|++|.+..+|.+|       ..+|.++|||++|+|++
T Consensus         2 k~~aAV~~~~~~P----l~i~ei~l~-~P~~gEVlVri~AtGVCHTD~~~~~G~~p-------~~~P~vLGHEgAGiVe~   69 (366)
T COG1062           2 KTRAAVAREAGKP----LEIEEVDLD-PPRAGEVLVRITATGVCHTDAHTLSGDDP-------EGFPAVLGHEGAGIVEA   69 (366)
T ss_pred             CceEeeeecCCCC----eEEEEEecC-CCCCCeEEEEEEEeeccccchhhhcCCCC-------CCCceecccccccEEEE
Confidence            4688888887765    899999999 99999999999999999999999999875       34899999999999999


Q ss_pred             eCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEeeCC
Q 018013          166 VGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMVPSK  196 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v~~~  196 (362)
                      ||++|+++++||+|+...                                                 .++|++|.++++.
T Consensus        70 VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~  149 (366)
T COG1062          70 VGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEI  149 (366)
T ss_pred             ecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeeccc
Confidence            999999999999998742                                                 1599999999999


Q ss_pred             CeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH
Q 018013          197 HILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE  272 (362)
Q Consensus       197 ~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~  272 (362)
                      .+++++++  +..++.+.+...|.+-+..+.++ ++|++|.|.| .|++|++++|-|+..|+ ++|+++.+++|++++++
T Consensus       150 s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~  228 (366)
T COG1062         150 SLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK  228 (366)
T ss_pred             ceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHh
Confidence            99999874  45555667888899998888888 9999999999 89999999999999999 99999999999999999


Q ss_pred             cCCcEEEeCCCc-cHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccC
Q 018013          273 LGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       273 ~g~~~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +|+++++|+++. ++.+.+..++++|+|.+|||+|+ +.++.++.++.++|+.+.+|.......
T Consensus       229 fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~  292 (366)
T COG1062         229 FGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQE  292 (366)
T ss_pred             cCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCce
Confidence            999999999987 68999999999899999999997 789999999999999999999776444

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=6.8e-37  Score=292.63  Aligned_cols=255  Identities=20%  Similarity=0.305  Sum_probs=215.7

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +||+++++..+..    +++++.+.| +++++||+|||.++|+|++|+++..|.++       ..+|.++|||++|+|++
T Consensus         1 ~mka~~~~~~~~~----~~~~~~~~p-~~~~~evlV~v~~~gi~~~D~~~~~g~~~-------~~~p~i~G~e~~G~V~~   68 (358)
T TIGR03451         1 TVRGVIARSKGAP----VELETIVVP-DPGPGEVIVDIQACGVCHTDLHYREGGIN-------DEFPFLLGHEAAGVVEA   68 (358)
T ss_pred             CcEEEEEccCCCC----CEEEEEECC-CCCCCeEEEEEEEEeecHHHHHHhcCCcc-------ccCCcccccceEEEEEE
Confidence            6999999987643    688899999 78999999999999999999999888642       34688999999999999


Q ss_pred             eCCCCCCCCCCCeEEEe-----------------------------------------cCCCeeeEEEeeCCCeeeCCCC
Q 018013          166 VGDSVNNVKVGTPAAIM-----------------------------------------TFGSYAEFTMVPSKHILPVARP  204 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~-----------------------------------------~~g~~~~~~~v~~~~~~~ip~~  204 (362)
                      +|++|++|++||+|++.                                         ..|+|+||+.+|+..++++|++
T Consensus        69 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~  148 (358)
T TIGR03451        69 VGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPA  148 (358)
T ss_pred             eCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCC
Confidence            99999999999999861                                         2488999999999999999985


Q ss_pred             --CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEe
Q 018013          205 --DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVIN  280 (362)
Q Consensus       205 --~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~  280 (362)
                        +.+++.++..+.+||+++.+... ++|++|||+| +|++|++++|+|+..|+ +|+++++++++++.++++|++++++
T Consensus       149 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~  227 (358)
T TIGR03451       149 ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN  227 (358)
T ss_pred             CChhHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence              45666777788999999877766 9999999997 69999999999999999 5999999999999999999999999


Q ss_pred             CCCccHHHHHHHHC-CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEE
Q 018013          281 YKAEDIKTVFKEEF-PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVV  358 (362)
Q Consensus       281 ~~~~~~~~~~~~~~-~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~  358 (362)
                      +.+.++.+.+...+ +.++|++|||+|+ +.++.++++++++|+++.+|....... ..+   +    ...++.|++++.
T Consensus       228 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~-~~~---~----~~~~~~~~~~i~  299 (358)
T TIGR03451       228 SSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMT-LEL---P----LLDVFGRGGALK  299 (358)
T ss_pred             CCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCce-eec---c----HHHHhhcCCEEE
Confidence            88777766666554 4689999999996 688999999999999999998653211 011   1    225778889998


Q ss_pred             Eec
Q 018013          359 CIH  361 (362)
Q Consensus       359 G~~  361 (362)
                      |++
T Consensus       300 ~~~  302 (358)
T TIGR03451       300 SSW  302 (358)
T ss_pred             Eee
Confidence            864

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.2e-36  Score=288.61  Aligned_cols=252  Identities=25%  Similarity=0.346  Sum_probs=211.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++.++     .+++++.+.| +++++||+||+.++|+|++|++.+.|.+..     ....|.++|||++|+|+++
T Consensus         1 mka~~~~~~~-----~l~~~~~~~p-~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-----~~~~p~i~G~e~~G~V~~v   69 (339)
T cd08239           1 MRGAVFPGDR-----TVELREFPVP-VPGPGEVLLRVKASGLCGSDLHYYYHGHRA-----PAYQGVIPGHEPAGVVVAV   69 (339)
T ss_pred             CeEEEEecCC-----ceEEEecCCC-CCCCCeEEEEEEEEEeccccHHHHcCCCCc-----cCCCCceeccCceEEEEEE
Confidence            7889987543     4889999999 789999999999999999999988765421     1235788999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |++|++|++||+|+...                             .|+|++|+++|...++++|++  +.++++++.++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~  149 (339)
T cd08239          70 GPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGI  149 (339)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchH
Confidence            99999999999998753                             589999999999999999985  45667778899


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-  293 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-  293 (362)
                      .|||+++.....++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++++|+++++++.+.+ .+.+.+. 
T Consensus       150 ~ta~~~l~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~  227 (339)
T cd08239         150 GTAYHALRRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELT  227 (339)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHh
Confidence            9999999876668899999998 599999999999999998 99999999999999999999999987766 4444443 


Q ss_pred             CCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          294 FPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       294 ~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++++|++|||+|+. .+..++++++++|+++.+|..+...    ..      ....++.|+++|.|++
T Consensus       228 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~------~~~~~~~~~~~i~g~~  286 (339)
T cd08239         228 SGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELT----IE------VSNDLIRKQRTLIGSW  286 (339)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcc----cC------cHHHHHhCCCEEEEEe
Confidence            456899999999975 5588999999999999999865321    11      1125788999999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.6e-36  Score=290.93  Aligned_cols=259  Identities=17%  Similarity=0.217  Sum_probs=214.0

Q ss_pred             CCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           83 LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      .|.+||+++++.++.    .+.+++.+.| +++++||+|||.++|||++|++.+.|.++.     ...+|.++|||++|+
T Consensus         7 ~~~~mka~~~~~~~~----~~~~~e~~~P-~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-----~~~~p~i~GhE~~G~   76 (381)
T PLN02740          7 KVITCKAAVAWGPGE----PLVMEEIRVD-PPQKMEVRIKILYTSICHTDLSAWKGENEA-----QRAYPRILGHEAAGI   76 (381)
T ss_pred             cceeeEEEEEecCCC----CcEEEEeeCC-CCCCCeEEEEEEEEecChhhHHHhCCCCcc-----cCCCCccccccceEE
Confidence            355799999987653    2677889988 789999999999999999999999886531     235688999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEec----------------------------------------------------CCCeeeE
Q 018013          163 IAAVGDSVNNVKVGTPAAIMT----------------------------------------------------FGSYAEF  190 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~~----------------------------------------------------~g~~~~~  190 (362)
                      |+++|++|++|++||+|++..                                                    .|+|+||
T Consensus        77 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey  156 (381)
T PLN02740         77 VESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEY  156 (381)
T ss_pred             EEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeE
Confidence            999999999999999998642                                                    4899999


Q ss_pred             EEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhH
Q 018013          191 TMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHK  266 (362)
Q Consensus       191 ~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~  266 (362)
                      +++|.+.++++|++  ..+++.++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|++++++++|
T Consensus       157 ~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r  235 (381)
T PLN02740        157 TVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEK  235 (381)
T ss_pred             EEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHH
Confidence            99999999999985  45666777889999999877666 9999999998 69999999999999999 69999999999


Q ss_pred             HHHHHHcCCcEEEeCCCc--cHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCC
Q 018013          267 AQLLKELGVDRVINYKAE--DIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSN  342 (362)
Q Consensus       267 ~~~l~~~g~~~v~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~  342 (362)
                      ++.++++|+++++++.+.  ++.+.+++..++++|++||++|+ +.+..++.+++++ |+++.+|...... ..++.   
T Consensus       236 ~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~-~~~~~---  311 (381)
T PLN02740        236 FEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPK-MLPLH---  311 (381)
T ss_pred             HHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCc-eeccc---
Confidence            999999999999988763  36666666555589999999996 7889999999996 9999999865421 11111   


Q ss_pred             hhhHHHHHHhcCeEEEEec
Q 018013          343 YPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       343 ~~~~~~~~~~k~~~i~G~~  361 (362)
                        .   ..+.++++|.|++
T Consensus       312 --~---~~~~~~~~i~g~~  325 (381)
T PLN02740        312 --P---MELFDGRSITGSV  325 (381)
T ss_pred             --H---HHHhcCCeEEEEe
Confidence              1   1134678888864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-36  Score=285.57  Aligned_cols=249  Identities=24%  Similarity=0.367  Sum_probs=205.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhc-CCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSS-GRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~-g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +++++++.++.     +++++.+.|  +.++||+|||.++|||++|++++. |.+..    ....+|.++|||++|+|++
T Consensus         5 ~~~~~~~~~~~-----~~~~~~~~p--~~~~evlVkv~a~gic~sD~~~~~~g~~~~----~~~~~p~v~GhE~~G~V~~   73 (343)
T PRK09880          5 TQSCVVAGKKD-----VAVTEQEIE--WNNNGTLVQITRGGICGSDLHYYQEGKVGN----FVIKAPMVLGHEVIGKIVH   73 (343)
T ss_pred             ceEEEEecCCc-----eEEEecCCC--CCCCeEEEEEEEEEECccccHhhccCCccc----ccccCCcccCcccEEEEEE
Confidence            67888876553     788888876  488999999999999999999875 43321    1235689999999999999


Q ss_pred             eCCCCCCCCCCCeEEEe---------------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHh
Q 018013          166 VGDSVNNVKVGTPAAIM---------------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAM  211 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~---------------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l  211 (362)
                      +  +|++|++||+|+..                                 ..|+|+||+++|++.++++|++ +.+.+++
T Consensus        74 v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~  151 (343)
T PRK09880         74 S--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF  151 (343)
T ss_pred             e--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHh
Confidence            9  78999999999852                                 2489999999999999999986 4556677


Q ss_pred             hhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHH
Q 018013          212 LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF  290 (362)
Q Consensus       212 ~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~  290 (362)
                      ..++.+||+++.+....+|++|+|+| +|++|++++|+|+.+|+ +|+++++++++++.++++|++++++++++++.+..
T Consensus       152 ~~~~~~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~  230 (343)
T PRK09880        152 AEPLAVAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYK  230 (343)
T ss_pred             hcHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHh
Confidence            88899999999887768899999998 59999999999999999 69999999999999999999999998876665433


Q ss_pred             HHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          291 KEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      . . .+++|++|||+|+ ..++.++++++++|+++.+|......        .++  ...++.|++++.|++
T Consensus       231 ~-~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~--------~~~--~~~~~~k~~~i~g~~  290 (343)
T PRK09880        231 A-E-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPP--------EFP--MMTLIVKEISLKGSF  290 (343)
T ss_pred             c-c-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCC--------ccC--HHHHHhCCcEEEEEe
Confidence            2 2 2369999999997 57899999999999999999754311        111  235779999999875

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.1e-35  Score=282.72  Aligned_cols=230  Identities=24%  Similarity=0.389  Sum_probs=193.8

Q ss_pred             CccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCC
Q 018013           98 NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGT  177 (362)
Q Consensus        98 ~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd  177 (362)
                      +-.+.+++++.+.|.+++++||+|||+++|||+.|...........   ....+|.++|+|++|+|+++|++|++|++||
T Consensus        18 ~~~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~---~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   94 (345)
T cd08293          18 PVAENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTD---YLAPWQLSQVLDGGGVGVVEESKHQKFAVGD   94 (345)
T ss_pred             CCccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccc---cCCCccCCCceEeeEEEEEeccCCCCCCCCC
Confidence            3345688899999833459999999999999999964332111100   0234677899999999999999999999999


Q ss_pred             eEEEecCCCeeeEEEeeCCCeeeCCCC--C----HHHHHhhhhHHHHHHHHHHhCC-CCC--CEEEEEcCCchHHHHHHH
Q 018013          178 PAAIMTFGSYAEFTMVPSKHILPVARP--D----PEVVAMLTSGLTASIALEQAGP-ASG--KKVLVTAAAGGTGQFAVQ  248 (362)
Q Consensus       178 ~V~~~~~g~~~~~~~v~~~~~~~ip~~--~----~~~a~l~~~~~tA~~al~~~~~-~~g--~~VlI~ga~g~vG~~aiq  248 (362)
                      +|+++. ++|+||+++|++.++++|+.  +    ..+++++.+++|||+++.+... ++|  ++|||+|++|++|++++|
T Consensus        95 ~V~~~~-~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiq  173 (345)
T cd08293          95 IVTSFN-WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQ  173 (345)
T ss_pred             EEEecC-CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHH
Confidence            998865 68999999999999999974  1    1245677899999999987766 666  999999999999999999


Q ss_pred             HHHHCCC-EEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEE
Q 018013          249 LAKLAGN-TVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       249 la~~~G~-~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~  326 (362)
                      +|+++|+ +|+++++++++.+.+++ +|+++++++.+.++.+.++...++++|++||++|+..+..++++|+++|+++.+
T Consensus       174 lAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~  253 (345)
T cd08293         174 IGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILC  253 (345)
T ss_pred             HHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEE
Confidence            9999999 89999999999999876 999999999888888877777678899999999998889999999999999999


Q ss_pred             cCccc
Q 018013          327 GMISQ  331 (362)
Q Consensus       327 G~~~~  331 (362)
                      |..+.
T Consensus       254 G~~~~  258 (345)
T cd08293         254 GQISQ  258 (345)
T ss_pred             eeeec
Confidence            97543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.2e-35  Score=283.90  Aligned_cols=252  Identities=20%  Similarity=0.243  Sum_probs=210.3

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      .||++++.....    .+.+++.+.| +++++||+|||.++|+|++|++.+.|..         .+|.++|||++|+|++
T Consensus        12 ~mka~~~~~~~~----~~~~~e~~~P-~~~~~eVlVkv~~~gic~sD~~~~~g~~---------~~p~i~GhE~~G~V~~   77 (378)
T PLN02827         12 TCRAAVAWGAGE----ALVMEEVEVS-PPQPLEIRIKVVSTSLCRSDLSAWESQA---------LFPRIFGHEASGIVES   77 (378)
T ss_pred             eeEEEEEecCCC----CceEEEeecC-CCCCCEEEEEEEEEecChhHHHHhcCCC---------CCCeeecccceEEEEE
Confidence            599999986543    3788899999 7999999999999999999999876631         3577899999999999


Q ss_pred             eCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEeeCC
Q 018013          166 VGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMVPSK  196 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v~~~  196 (362)
                      +|++|++|++||+|++..                                                 .|+|+||+.+|+.
T Consensus        78 vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~  157 (378)
T PLN02827         78 IGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (378)
T ss_pred             cCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechh
Confidence            999999999999999753                                                 2799999999999


Q ss_pred             CeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH
Q 018013          197 HILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE  272 (362)
Q Consensus       197 ~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~  272 (362)
                      .++++|++  +.+++.++.++.++|+++.+... ++|++|||+| +|++|++++|+|+.+|+ .|++++++++|.+.+++
T Consensus       158 ~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~  236 (378)
T PLN02827        158 CAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT  236 (378)
T ss_pred             heEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence            99999985  44566677788899988876666 9999999998 69999999999999999 58888889999999999


Q ss_pred             cCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCChhhHHH
Q 018013          273 LGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSNYPGLCE  348 (362)
Q Consensus       273 ~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~  348 (362)
                      +|+++++++++  +++.+.+++.+++++|++||++|. ..+..+++.++++ |+++.+|.......   +..      ..
T Consensus       237 lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~---~~~------~~  307 (378)
T PLN02827        237 FGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPE---VSA------HY  307 (378)
T ss_pred             cCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCcc---ccc------cH
Confidence            99999998875  356666666555589999999997 4789999999998 99999998654211   111      11


Q ss_pred             HHHhcCeEEEEec
Q 018013          349 KILAKSQTVVCIH  361 (362)
Q Consensus       349 ~~~~k~~~i~G~~  361 (362)
                      .++.|+++|.|++
T Consensus       308 ~~~~~~~~i~g~~  320 (378)
T PLN02827        308 GLFLSGRTLKGSL  320 (378)
T ss_pred             HHHhcCceEEeee
Confidence            4678999999874

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=5.4e-36  Score=262.96  Aligned_cols=267  Identities=22%  Similarity=0.238  Sum_probs=226.9

Q ss_pred             cccCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCc
Q 018013           79 LNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFE  158 (362)
Q Consensus        79 ~~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e  158 (362)
                      ....+|...|++++..++ ++.+++++++.++| ....++|+||..|+.|||+|++.++|.||.     ...+|.+-|.|
T Consensus        12 sa~q~~~~~kalvY~~hg-dP~kVlql~~~~~p-~~~~s~v~Vk~LAaPINPsDIN~IQGvYpv-----rP~~PAVgGnE   84 (354)
T KOG0025|consen   12 SASQMPARSKALVYSEHG-DPAKVLQLKNLELP-AVPGSDVLVKMLAAPINPSDINQIQGVYPV-----RPELPAVGGNE   84 (354)
T ss_pred             cccccccccceeeecccC-CchhhheeecccCC-CCCCCceeeeeeecCCChHHhhhhccccCC-----CCCCCcccCCc
Confidence            344667778999999998 67889999999999 666666999999999999999999999986     45678889999


Q ss_pred             eEEEEEEeCCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEE
Q 018013          159 AVGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKV  233 (362)
Q Consensus       159 ~~G~V~~vG~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~V  233 (362)
                      ++|.|+++|+++++|++||+|+...  .|+|++|.+.+++.++++++.  ...+|++....+|||..|.+.-. ++|++|
T Consensus        85 Gv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~v  164 (354)
T KOG0025|consen   85 GVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSV  164 (354)
T ss_pred             ceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCee
Confidence            9999999999999999999999875  489999999999999999984  67788889999999999999888 999999


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEEEeCCCccHHHHHHH-HCCCceeEEEECCChH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRVINYKAEDIKTVFKE-EFPKGFDIIYESVGGD  308 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v~~~~~~~~~~~~~~-~~~~g~Dvvid~~g~~  308 (362)
                      +-.||.+++|++.+|+|+++|.+-+-++|+....+.+    +.+|+++|+....-.-.+.... ....++.+.|||+|+.
T Consensus       165 IQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGk  244 (354)
T KOG0025|consen  165 IQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGK  244 (354)
T ss_pred             eecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCch
Confidence            9999999999999999999999888888876655554    5699999985432111111111 1235689999999999


Q ss_pred             HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          309 MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       309 ~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ......+.|.+||.+|.+|.++..+...+-.         .+++|+|+++||+
T Consensus       245 sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts---------~lIFKdl~~rGfW  288 (354)
T KOG0025|consen  245 SATEIARYLERGGTMVTYGGMSKQPVTVPTS---------LLIFKDLKLRGFW  288 (354)
T ss_pred             hHHHHHHHHhcCceEEEecCccCCCcccccc---------hheeccceeeeee
Confidence            8899999999999999999999877753322         4999999999996

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3e-35  Score=282.43  Aligned_cols=255  Identities=18%  Similarity=0.234  Sum_probs=212.8

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +|||+++...+..    +++++.+.| +++++||+|||.++|+|++|++.+.|.++      ...+|.++|||++|+|++
T Consensus         2 ~~ka~~~~~~~~~----~~l~~~~~p-~~~~~evlIkv~a~gi~~~D~~~~~g~~~------~~~~p~i~G~e~~G~V~~   70 (369)
T cd08301           2 TCKAAVAWEAGKP----LVIEEVEVA-PPQAMEVRIKILHTSLCHTDVYFWEAKGQ------TPLFPRILGHEAAGIVES   70 (369)
T ss_pred             ccEEEEEecCCCC----cEEEEeeCC-CCCCCeEEEEEEEEeeCchhHHHhcCCCC------CCCCCcccccccceEEEE
Confidence            6899999876543    788999998 78999999999999999999999888653      245688999999999999


Q ss_pred             eCCCCCCCCCCCeEEEec--------------------------------------------------CCCeeeEEEeeC
Q 018013          166 VGDSVNNVKVGTPAAIMT--------------------------------------------------FGSYAEFTMVPS  195 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~--------------------------------------------------~g~~~~~~~v~~  195 (362)
                      +|++|++|++||+|++..                                                  .|+|+||+++|.
T Consensus        71 vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~  150 (369)
T cd08301          71 VGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHV  150 (369)
T ss_pred             eCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEec
Confidence            999999999999998741                                                  278999999999


Q ss_pred             CCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH
Q 018013          196 KHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK  271 (362)
Q Consensus       196 ~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~  271 (362)
                      ..++++|++  +.+++.++..+.|||+++.+... ++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus       151 ~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~  229 (369)
T cd08301         151 GCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK  229 (369)
T ss_pred             ccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            999999985  45666777888999999877666 9999999998 69999999999999999 8999999999999999


Q ss_pred             HcCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCChhhHH
Q 018013          272 ELGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSNYPGLC  347 (362)
Q Consensus       272 ~~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~  347 (362)
                      ++|++.++++.+  .++.+.+++..++++|++||++|+ ..+..++++++++ |+++.+|..+....   +   ++.  .
T Consensus       230 ~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~---~---~~~--~  301 (369)
T cd08301         230 KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAV---F---STH--P  301 (369)
T ss_pred             HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcc---c---ccC--H
Confidence            999999998775  346666666655689999999986 5788899999996 99999998764211   1   111  1


Q ss_pred             HHHHhcCeEEEEec
Q 018013          348 EKILAKSQTVVCIH  361 (362)
Q Consensus       348 ~~~~~k~~~i~G~~  361 (362)
                      ..+ .+++++.|++
T Consensus       302 ~~~-~~~~~i~g~~  314 (369)
T cd08301         302 MNL-LNGRTLKGTL  314 (369)
T ss_pred             HHH-hcCCeEEEEe
Confidence            123 4688998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=3e-35  Score=282.27  Aligned_cols=232  Identities=25%  Similarity=0.322  Sum_probs=200.7

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++...+.    .+++++.+.| +++++||+|||.++|+|++|++...|.++.      ..+|.++|||++|+|+++
T Consensus         2 ~~a~~~~~~~~----~l~~~~~~~P-~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~------~~~p~i~GhE~~G~V~~v   70 (368)
T TIGR02818         2 SRAAVAWAAGQ----PLKIEEVDVE-MPQKGEVLVRIVATGVCHTDAFTLSGADPE------GVFPVILGHEGAGIVEAV   70 (368)
T ss_pred             ceEEEEecCCC----CeEEEEecCC-CCCCCeEEEEEEEecccHHHHHHhcCCCCC------CCCCeeeccccEEEEEEE
Confidence            78888877553    3788899988 789999999999999999999999887531      346889999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEeeCCC
Q 018013          167 GDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMVPSKH  197 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v~~~~  197 (362)
                      |++|++|++||+|++..                                                 .|+|+||+++|...
T Consensus        71 G~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  150 (368)
T TIGR02818        71 GEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEIS  150 (368)
T ss_pred             CCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhh
Confidence            99999999999998642                                                 26899999999999


Q ss_pred             eeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHc
Q 018013          198 ILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKEL  273 (362)
Q Consensus       198 ~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~  273 (362)
                      ++++|++  +.++++++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|++++.++++++.++++
T Consensus       151 ~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~  229 (368)
T TIGR02818       151 LAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKL  229 (368)
T ss_pred             eEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence            9999985  45677778899999999977666 9999999997 69999999999999999 799999999999999999


Q ss_pred             CCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcc
Q 018013          274 GVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMIS  330 (362)
Q Consensus       274 g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~  330 (362)
                      |+++++++.+  .++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|...
T Consensus       230 Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~  290 (368)
T TIGR02818       230 GATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAG  290 (368)
T ss_pred             CCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccC
Confidence            9999998774  345555555554589999999995 6789999999886 9999999864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.8e-35  Score=262.16  Aligned_cols=251  Identities=28%  Similarity=0.423  Sum_probs=216.7

Q ss_pred             CCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC--CCCCCCC
Q 018013           97 HNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG--DSVNNVK  174 (362)
Q Consensus        97 ~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~  174 (362)
                      .+..+.+++++.++| +++++|||+|..|.+++|    ...|+.....   +--.|+-+|-..+|-++...  |...+|+
T Consensus        21 ~p~~d~F~lee~~vp-~p~~GqvLl~~~ylS~DP----ymRgrm~d~~---SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~   92 (340)
T COG2130          21 APVPDDFRLEEVDVP-EPGEGQVLLRTLYLSLDP----YMRGRMSDAP---SYAPPVELGEVMVGGTVAKVVASNHPGFQ   92 (340)
T ss_pred             CCCCCCceeEeccCC-CCCcCceEEEEEEeccCH----HHeecccCCc---ccCCCcCCCceeECCeeEEEEecCCCCCC
Confidence            344456899999999 789999999999999999    3445543222   23346678877766555433  4567899


Q ss_pred             CCCeEEEecCCCeeeEEEeeCCCeeeCCCC----CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHH
Q 018013          175 VGTPAAIMTFGSYAEFTMVPSKHILPVARP----DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQL  249 (362)
Q Consensus       175 ~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~----~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiql  249 (362)
                      +||.|.++.  +|++|..++.+.+.|+..+    ......+..+..|||.+|.+.+. ++|++|+|.+|+|++|..+.|+
T Consensus        93 ~GD~V~~~~--GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQi  170 (340)
T COG2130          93 PGDIVVGVS--GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQI  170 (340)
T ss_pred             CCCEEEecc--cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHH
Confidence            999999876  9999999999999999753    34555788899999999999999 9999999999999999999999


Q ss_pred             HHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcC
Q 018013          250 AKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       250 a~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ||..|++|+.++.+++|.+++++ +|.|.++||+++++.+.+.+..++|+|+.|||+|++.++.++..|+.++|++.||.
T Consensus       171 AKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~  250 (340)
T COG2130         171 AKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGA  250 (340)
T ss_pred             HHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeee
Confidence            99999999999999999999986 99999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCC-CCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          329 ISQYQGE-HGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       329 ~~~~~~~-~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++|+.. .+..++.++.    ++.|+++++||.
T Consensus       251 IS~YN~~~~~~gp~~l~~----l~~kr~~v~Gfi  280 (340)
T COG2130         251 ISQYNAPELPPGPRRLPL----LMAKRLRVQGFI  280 (340)
T ss_pred             hhhcCCCCCCCCcchhhH----HHhhhheeEEEE
Confidence            9999987 5566667664    778899999984

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2.8e-35  Score=277.60  Aligned_cols=260  Identities=26%  Similarity=0.370  Sum_probs=214.0

Q ss_pred             ceEEEEeccCCCc-cCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNF-RDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~-~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      ||+++++..+.+. -+.+.+.+.+.| .++++||+|++.++|+|++|++...|.++.     ...+|.++|||++|+|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p-~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-----~~~~p~v~G~e~~G~V~~   74 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVP-EPGPGEVLIKVEAAPINPSDLGFLKGQYGS-----TKALPVPPGFEGSGTVVA   74 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCC-CCCCCeEEEEEEEccCCHHHHHHhcCcCCC-----CCCCCcCCCcceEEEEEE
Confidence            6888888765321 134778888888 789999999999999999999999886542     234678999999999999


Q ss_pred             eCCCCCC-CCCCCeEEEecC--CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEE-cCC
Q 018013          166 VGDSVNN-VKVGTPAAIMTF--GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVT-AAA  239 (362)
Q Consensus       166 vG~~v~~-~~~Gd~V~~~~~--g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~-ga~  239 (362)
                      +|+++++ |++||+|+++..  |+|++|+++|++.++++|++  +.++++++..++|||..+. ....++++++|+ +++
T Consensus        75 vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~-~~~~~~~~vlv~~~g~  153 (324)
T cd08291          75 AGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLE-TAREEGAKAVVHTAAA  153 (324)
T ss_pred             ECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHH-hhccCCCcEEEEccCc
Confidence            9999996 999999998765  99999999999999999985  4566677888899975553 333456667776 789


Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhc
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALA  318 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~  318 (362)
                      |++|++++|+|+.+|++|+++++++++.+.++++|+++++++...++.+.+++.. ++++|++||++|+......+++++
T Consensus       154 g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~  233 (324)
T cd08291         154 SALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMP  233 (324)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhC
Confidence            9999999999999999999999999999999999999999998877777666654 468999999999988888999999


Q ss_pred             cCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          319 VYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       319 ~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++|+++.+|..+..... .+   +    ...++.|++++.|++
T Consensus       234 ~~G~~v~~g~~~~~~~~-~~---~----~~~~~~~~~~~~~~~  268 (324)
T cd08291         234 YGSTLYVYGYLSGKLDE-PI---D----PVDLIFKNKSIEGFW  268 (324)
T ss_pred             CCCEEEEEEecCCCCcc-cC---C----HHHHhhcCcEEEEEE
Confidence            99999999987653321 01   1    124678999998875

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-34  Score=274.16  Aligned_cols=264  Identities=25%  Similarity=0.367  Sum_probs=208.3

Q ss_pred             cceEEEEeccCCCc--cCceEEEec---cCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCC--c
Q 018013           86 SFEKLVVHTLNHNF--RDATIKVRA---PLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGF--E  158 (362)
Q Consensus        86 ~~~a~~~~~~~~~~--~~~~~~~~~---~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~--e  158 (362)
                      +.|.|++.....++  .+.+++++.   +.|.+++++||+||+.++++|+.|.....+.+.      ....|+++|+  |
T Consensus         8 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~------~~~~p~~~G~~~~   81 (348)
T PLN03154          8 ENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD------SYLPPFVPGQRIE   81 (348)
T ss_pred             cceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC------CCCCCcCCCCeeE
Confidence            35667765433222  234677764   555457899999999999999998764433211      1235788997  8


Q ss_pred             eEEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCC--eee--CCCC--CH-HHHHhhhhHHHHHHHHHHhCC-CCC
Q 018013          159 AVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKH--ILP--VARP--DP-EVVAMLTSGLTASIALEQAGP-ASG  230 (362)
Q Consensus       159 ~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~--~~~--ip~~--~~-~~a~l~~~~~tA~~al~~~~~-~~g  230 (362)
                      ++|+|..+|+++++|++||+|+++  |+|+||.+++...  +.+  +|++  +. ++++++.+++|||+++.+... ++|
T Consensus        82 ~~G~v~~vg~~v~~~~~Gd~V~~~--~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g  159 (348)
T PLN03154         82 GFGVSKVVDSDDPNFKPGDLISGI--TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKG  159 (348)
T ss_pred             eeEEEEEEecCCCCCCCCCEEEec--CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCC
Confidence            899999999999999999999865  6899999999864  544  4764  33 567889999999999987766 999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGD  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~  308 (362)
                      ++|||+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++.+ .++.+.++...++++|++|||+|+.
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~  239 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD  239 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH
Confidence            99999999999999999999999999999999999999997 799999999875 4677777766667899999999999


Q ss_pred             HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          309 MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       309 ~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+..++++++++|+++.+|..+...........+    ...++.|++++.|++
T Consensus       240 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~----~~~~~~k~~~i~g~~  288 (348)
T PLN03154        240 MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHN----LYNLISKRIRMQGFL  288 (348)
T ss_pred             HHHHHHHHhccCCEEEEECccccCCCCCCCCccc----HHHHhhccceEEEEE
Confidence            9999999999999999999876533210011111    235788999999975

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=5.7e-35  Score=280.34  Aligned_cols=233  Identities=24%  Similarity=0.308  Sum_probs=202.5

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +||++++...+.    .+++++.+.| .++++||+|||.++|+|++|++...|.++      ...+|.++|||++|+|++
T Consensus         2 ~~~a~~~~~~~~----~~~~~~~~~P-~~~~~eVlIrv~a~gi~~~D~~~~~g~~~------~~~~p~v~G~E~~G~V~~   70 (368)
T cd08300           2 TCKAAVAWEAGK----PLSIEEVEVA-PPKAGEVRIKILATGVCHTDAYTLSGADP------EGLFPVILGHEGAGIVES   70 (368)
T ss_pred             cceEEEEecCCC----CcEEEEeecC-CCCCCEEEEEEEEEEechhhHHHhcCCCc------cCCCCceeccceeEEEEE
Confidence            478888876553    3788899999 78999999999999999999999988753      235788999999999999


Q ss_pred             eCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEeeCC
Q 018013          166 VGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMVPSK  196 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v~~~  196 (362)
                      +|+++++|++||+|++..                                                 .|+|+||+.++++
T Consensus        71 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  150 (368)
T cd08300          71 VGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEI  150 (368)
T ss_pred             eCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchh
Confidence            999999999999998641                                                 2589999999999


Q ss_pred             CeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH
Q 018013          197 HILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE  272 (362)
Q Consensus       197 ~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~  272 (362)
                      .++++|++  +.+++.++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|++++++++|.+.+++
T Consensus       151 ~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~  229 (368)
T cd08300         151 SVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK  229 (368)
T ss_pred             ceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999985  45677777899999999877666 9999999997 69999999999999999 79999999999999999


Q ss_pred             cCCcEEEeCCCc--cHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcc
Q 018013          273 LGVDRVINYKAE--DIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMIS  330 (362)
Q Consensus       273 ~g~~~v~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~  330 (362)
                      +|+++++++.+.  ++.+.+.+.+++++|+|||++|+ ..++.++++++++ |+++.+|...
T Consensus       230 lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~  291 (368)
T cd08300         230 FGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA  291 (368)
T ss_pred             cCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCC
Confidence            999999998764  46666666655689999999996 6889999999886 9999999874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-34  Score=273.58  Aligned_cols=258  Identities=26%  Similarity=0.352  Sum_probs=211.6

Q ss_pred             cceEEEEecc--CCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEE
Q 018013           86 SFEKLVVHTL--NHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        86 ~~~a~~~~~~--~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      .|++|++..+  +....+.+++++.+.| +|+++||+|||.++|||+.|.+...+         ....|.++|+|++|+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p-~~~~~evlVkv~a~~in~~~~~~~~~---------~~~~p~v~G~e~~G~V   71 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELP-PLKDGEVLCEALFLSVDPYMRPYSKR---------LNEGDTMIGTQVAKVI   71 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCC-CCCCCcEEEEEEEEecCHHHhccccc---------CCCCCcEecceEEEEE
Confidence            4899999884  4444477999999999 89999999999999999987652211         1235778999999999


Q ss_pred             EEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCC---CeeeCCCCC-------HHHHHhhhhHHHHHHHHHHhCC-CCCCE
Q 018013          164 AAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSK---HILPVARPD-------PEVVAMLTSGLTASIALEQAGP-ASGKK  232 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~---~~~~ip~~~-------~~~a~l~~~~~tA~~al~~~~~-~~g~~  232 (362)
                      ++   .++.|++||+|++.  ++|++|++++.+   .++++|+..       ...++++.+++|||+++..... ++|++
T Consensus        72 ~~---~~~~~~~Gd~V~~~--~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~  146 (329)
T cd08294          72 ES---KNSKFPVGTIVVAS--FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGET  146 (329)
T ss_pred             ec---CCCCCCCCCEEEee--CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCE
Confidence            85   45689999999875  589999999999   999999852       2234678899999999987776 99999


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHH
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNL  312 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~  312 (362)
                      |||+|++|++|++++|+|+..|++|+++++++++.+.++++|+++++++.+.++.+.+....++++|++||++|++.+..
T Consensus       147 vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~~~  226 (329)
T cd08294         147 VVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSST  226 (329)
T ss_pred             EEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888877777776788999999999999999


Q ss_pred             HHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          313 CLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       313 ~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++++++|+|+.+|..+.+.......   .+.....++.+++++.|++
T Consensus       227 ~~~~l~~~G~iv~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~  272 (329)
T cd08294         227 VLSHMNDFGRVAVCGSISTYNDKEPKK---GPYVQETIIFKQLKMEGFI  272 (329)
T ss_pred             HHHhhccCCEEEEEcchhccCCCCCCc---CcccHHHHhhhcceEEEEE
Confidence            999999999999999765433211000   0111224677888888763

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.3e-34  Score=273.23  Aligned_cols=270  Identities=56%  Similarity=0.899  Sum_probs=229.0

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +||+++++.++..+++.+++++.+.| .+.++||+|++.++|+|+.|++...|.++.     ....|.++|+|++|+|+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-----~~~~p~~~g~e~~G~v~~   74 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVP-LPGPGEVLVKNRFVGINASDINFTAGRYDP-----GVKPPFDCGFEGVGEVVA   74 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCC-CCCCCEEEEEEEEEecCHHHHHHHhCCCCC-----CCCCCcccCceeEEEEEE
Confidence            59999999999888899999999998 789999999999999999999988886532     134678899999999999


Q ss_pred             eCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCCCHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHH
Q 018013          166 VGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQ  244 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~  244 (362)
                      +|++++.+++||+|+++..|+|++|+.++.+.++++|+...++++++.++.+||+++..... ++|++|+|+|++|++|+
T Consensus        75 vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~ip~~~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~  154 (329)
T cd08250          75 VGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPVPELKPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQ  154 (329)
T ss_pred             ECCCCCCCCCCCEEEEecCcceeEEEEechHHeEECCCCcchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHH
Confidence            99999999999999999889999999999999999998766778899999999999988777 99999999999999999


Q ss_pred             HHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEE
Q 018013          245 FAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI  324 (362)
Q Consensus       245 ~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v  324 (362)
                      +++|+|+..|++|+++++++++.+.++++|++.+++....++.+.+....++++|++||++|+..+..++++++++|+++
T Consensus       155 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v  234 (329)
T cd08250         155 FAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLI  234 (329)
T ss_pred             HHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEE
Confidence            99999999999999999999999999999999999887777766666565678999999999999999999999999999


Q ss_pred             EEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          325 VIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       325 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+|............+.+...+....+.++.++.++.
T Consensus       235 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (329)
T cd08250         235 VIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFF  271 (329)
T ss_pred             EEecccCCcccCcccccccccccHHHhhcCceEEEEE
Confidence            9998765322100000000111123567777777763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-35  Score=264.22  Aligned_cols=239  Identities=24%  Similarity=0.291  Sum_probs=215.6

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEE
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      +-++||++.+.++.+    |.++++..+ ||+.+||+||+.++++|++|.+.++|..+      ...+|.++|||++|+|
T Consensus         5 vI~CKAAV~w~a~~P----L~IEei~V~-pPka~EVRIKI~~t~vCHTD~~~~~g~~~------~~~fP~IlGHEaaGIV   73 (375)
T KOG0022|consen    5 VITCKAAVAWEAGKP----LVIEEIEVA-PPKAHEVRIKILATGVCHTDAYVWSGKDP------EGLFPVILGHEAAGIV   73 (375)
T ss_pred             ceEEeEeeeccCCCC----eeEEEEEeC-CCCCceEEEEEEEEeeccccceeecCCCc------cccCceEecccceeEE
Confidence            457899999988765    899999999 99999999999999999999999999753      4678999999999999


Q ss_pred             EEeCCCCCCCCCCCeEEEec--------------------------------------------------CCCeeeEEEe
Q 018013          164 AAVGDSVNNVKVGTPAAIMT--------------------------------------------------FGSYAEFTMV  193 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~~--------------------------------------------------~g~~~~~~~v  193 (362)
                      +.+|++|+++++||+|+...                                                  ..+|+||.++
T Consensus        74 ESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv  153 (375)
T KOG0022|consen   74 ESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVV  153 (375)
T ss_pred             EEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEe
Confidence            99999999999999999742                                                  1499999999


Q ss_pred             eCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHH
Q 018013          194 PSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQL  269 (362)
Q Consensus       194 ~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~  269 (362)
                      +...+.+++++  .+.++.+.+.+.|+|-|..+.+. ++|+++.|+| -|++|+++++-||+.|| ++|+++-+++|.+.
T Consensus       154 ~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~  232 (375)
T KOG0022|consen  154 DDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEK  232 (375)
T ss_pred             ecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHH
Confidence            99999999874  45555667889999999888888 9999999999 89999999999999999 99999999999999


Q ss_pred             HHHcCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccC
Q 018013          270 LKELGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQG  334 (362)
Q Consensus       270 l~~~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~  334 (362)
                      ++++|+.+++|+.+  ..+.+.+.+.++.|+|+-|||+|+ +.+++++.+.+.+ |.-|.+|.....+.
T Consensus       233 ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~  301 (375)
T KOG0022|consen  233 AKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQE  301 (375)
T ss_pred             HHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcc
Confidence            99999999999985  458889999999999999999997 7899999999998 99999999776444

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=7.7e-35  Score=275.21  Aligned_cols=246  Identities=24%  Similarity=0.291  Sum_probs=202.9

Q ss_pred             EEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCC
Q 018013           90 LVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDS  169 (362)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~  169 (362)
                      +.++.++......+++++.|.| .++++||+|||.++|+|++|++...|.++.      ...|.++|||++|+|+++|++
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P-~~~~~evlVkv~~~gi~~~D~~~~~g~~~~------~~~p~i~G~e~~G~V~~vG~~   74 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVP-RPGPGELLVRVRACGVCRTDLHVSEGDLPV------HRPRVTPGHEVVGEVAGRGAD   74 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCC-CCCCCeEEEEEEEEeecchhHHHHcCCCCC------CCCCccCCcceEEEEEEECCC
Confidence            3455554433356889999999 799999999999999999999999887532      234788999999999999999


Q ss_pred             CCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHH
Q 018013          170 VNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTA  218 (362)
Q Consensus       170 v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA  218 (362)
                      |++|++||+|++.                             .+|+|+||+.+|...++++|++  +.++++++.++.||
T Consensus        75 v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta  154 (329)
T TIGR02822        75 AGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIG  154 (329)
T ss_pred             CcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHH
Confidence            9999999999742                             1489999999999999999985  45677888999999


Q ss_pred             HHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCce
Q 018013          219 SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       219 ~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      |+++.....++|++|||+|+ |++|++++|+|+.+|++|++++++++|.+.++++|+++++++.+..         .+++
T Consensus       155 ~~~~~~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~---------~~~~  224 (329)
T TIGR02822       155 YRALLRASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP---------PEPL  224 (329)
T ss_pred             HHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC---------cccc
Confidence            99997644499999999995 9999999999999999999999999999999999999998854321         2468


Q ss_pred             eEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          299 DIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       299 Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      |+++++.+ ++.+..++++++++|+++.+|.......  ++.       +..++.|++++.|++
T Consensus       225 d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~--~~~-------~~~~~~~~~~i~g~~  279 (329)
T TIGR02822       225 DAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTP--PLN-------YQRHLFYERQIRSVT  279 (329)
T ss_pred             eEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCC--CCC-------HHHHhhCCcEEEEee
Confidence            99998877 4788999999999999999998533211  111       234678899998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=6.8e-35  Score=278.49  Aligned_cols=257  Identities=23%  Similarity=0.282  Sum_probs=202.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+.   + +++++.|.| +++++||+|||.++|||++|++.+.|.++...   ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~---~-l~~~~~p~p-~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~---~~~~p~i~G~e~~G~V~~v   72 (355)
T cd08230           1 MKAIAVKPGKP---G-VRVVDIPEP-EPTPGEVLVRTLEVGVCGTDREIVAGEYGTAP---PGEDFLVLGHEALGVVEEV   72 (355)
T ss_pred             CceeEecCCCC---C-CeEEeCCCC-CCCCCeEEEEEEEEEeccccHHHHcCCCCCCC---CCCCCeeeccccceEEEEe
Confidence            67888874332   2 788999999 88999999999999999999999998754221   1246789999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-------------------------------CCCeeeEEEeeCCCeeeCCCCCHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIMT-------------------------------FGSYAEFTMVPSKHILPVARPDPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------------------------------~g~~~~~~~v~~~~~~~ip~~~~~~a~l~~~~  215 (362)
                      |++ ++|++||+|+...                               +|+|+||+++|++.++++|++..+.+++..++
T Consensus        73 G~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~~~a~~~~p~  151 (355)
T cd08230          73 GDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLADVGVLLEPL  151 (355)
T ss_pred             cCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCCcceeecchH
Confidence            999 9999999998632                               38899999999999999998744666666666


Q ss_pred             HHHHHHHHHh------C-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC---CHhHHHHHHHcCCcEEEeCCCcc
Q 018013          216 LTASIALEQA------G-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---GEHKAQLLKELGVDRVINYKAED  285 (362)
Q Consensus       216 ~tA~~al~~~------~-~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---~~~~~~~l~~~g~~~v~~~~~~~  285 (362)
                      .+++.++...      . .++|++|+|+| +|++|++++|+|+.+|++|+++++   +++|++.++++|+++ +++.+++
T Consensus       152 ~~~~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~  229 (355)
T cd08230         152 SVVEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTP  229 (355)
T ss_pred             HHHHHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc
Confidence            6655554322      1 26899999998 699999999999999999999987   688999999999987 4666555


Q ss_pred             HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          286 IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       286 ~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +.+ ..  ...++|+||||+|+ ..+..++++++++|+++.+|....... .++.+.   .....++.|+++|.|++
T Consensus       230 ~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~-~~~~~~---~~~~~~~~k~~~i~g~~  299 (355)
T cd08230         230 VAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGRE-FEVDGG---ELNRDLVLGNKALVGSV  299 (355)
T ss_pred             hhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCc-cccChh---hhhhhHhhcCcEEEEec
Confidence            543 21  23579999999996 578999999999999999998765211 111111   11235788999999975

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.8e-34  Score=275.23  Aligned_cols=233  Identities=23%  Similarity=0.301  Sum_probs=201.0

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      .||++++...+..    +++++.|.| .+.++||+|||.++|+|++|++...|.++       ..+|.++|||++|+|++
T Consensus         2 ~~ka~~~~~~~~~----~~~~~~~~p-~~~~~evlVkv~~~gi~~sD~~~~~g~~~-------~~~p~i~G~e~~G~V~~   69 (365)
T cd08277           2 KCKAAVAWEAGKP----LVIEEIEVA-PPKANEVRIKMLATSVCHTDILAIEGFKA-------TLFPVILGHEGAGIVES   69 (365)
T ss_pred             ccEEEEEccCCCC----cEEEEEECC-CCCCCEEEEEEEEEeechhhHHHhcCCCC-------CCCCeecccceeEEEEe
Confidence            3788888865533    788999998 78999999999999999999999888642       34678999999999999


Q ss_pred             eCCCCCCCCCCCeEEEec------------------------------------------------CCCeeeEEEeeCCC
Q 018013          166 VGDSVNNVKVGTPAAIMT------------------------------------------------FGSYAEFTMVPSKH  197 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~------------------------------------------------~g~~~~~~~v~~~~  197 (362)
                      +|++|+++++||+|++..                                                .|+|+||++++.+.
T Consensus        70 vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~  149 (365)
T cd08277          70 VGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENY  149 (365)
T ss_pred             eCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhh
Confidence            999999999999998741                                                37899999999999


Q ss_pred             eeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHc
Q 018013          198 ILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKEL  273 (362)
Q Consensus       198 ~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~  273 (362)
                      ++++|++  +.++++++.++.|||+++..... ++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++++.++++
T Consensus       150 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~  228 (365)
T cd08277         150 VAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEF  228 (365)
T ss_pred             eEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHc
Confidence            9999985  45677778899999999876666 9999999997 69999999999999999 799999999999999999


Q ss_pred             CCcEEEeCCCc--cHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCccc
Q 018013          274 GVDRVINYKAE--DIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQ  331 (362)
Q Consensus       274 g~~~v~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~  331 (362)
                      |+++++++.+.  ++.+.++...++++|++|||+|+ ..+..++++++++ |+++.+|...+
T Consensus       229 ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  290 (365)
T cd08277         229 GATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG  290 (365)
T ss_pred             CCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc
Confidence            99999987653  34555655555789999999995 6788999999885 99999998753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=3.1e-34  Score=269.91  Aligned_cols=259  Identities=23%  Similarity=0.335  Sum_probs=216.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++. +.+.+++.+.+.| .+.++||+|+|.++++|+.|++...|.++.     ....|.++|||++|+|+++
T Consensus         1 m~a~~~~~~~~-~~~~~~~~~~~~p-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-----~~~~p~~~G~e~~G~V~~~   73 (324)
T cd08292           1 MRAAVHTQFGD-PADVLEIGEVPKP-TPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-----KPELPAIGGSEAVGVVDAV   73 (324)
T ss_pred             CeeEEEccCCC-hhHeEEEeecCCC-CCCCCeEEEEEEEccCCHHHHHHhcCcCCC-----CCCCCCCCCcceEEEEEEe
Confidence            68888875442 2234788999999 789999999999999999999998887542     1235778999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHH
Q 018013          167 GDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTG  243 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG  243 (362)
                      |++|+.|++||+|+++. .|+|++|++++...++++|++  +.+++.++..+++||+++.....++|++|+|+|++|++|
T Consensus        74 G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig  153 (324)
T cd08292          74 GEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVG  153 (324)
T ss_pred             CCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHH
Confidence            99999999999999986 799999999999999999985  456667778889999998664339999999999999999


Q ss_pred             HHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCE
Q 018013          244 QFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGR  322 (362)
Q Consensus       244 ~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~  322 (362)
                      ++++|+|+.+|++|+++++++++.+.++++|+++++++.+.++.+.+... .++++|++|||+|+.....++++++++|+
T Consensus       154 ~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~  233 (324)
T cd08292         154 KLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGT  233 (324)
T ss_pred             HHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcE
Confidence            99999999999999999999999999988999999998877776666554 45789999999999888999999999999


Q ss_pred             EEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          323 LIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       323 ~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      |+.+|.......  .+   +    ...++.+++++.++.
T Consensus       234 ~v~~g~~~~~~~--~~---~----~~~~~~~~~~~~~~~  263 (324)
T cd08292         234 LVSFGSMSGEPM--QI---S----SGDLIFKQATVRGFW  263 (324)
T ss_pred             EEEEecCCCCCC--cC---C----HHHHhhCCCEEEEEE
Confidence            999997632111  01   1    113556888888764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=5.7e-34  Score=268.82  Aligned_cols=244  Identities=23%  Similarity=0.330  Sum_probs=198.7

Q ss_pred             cCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeE
Q 018013          100 RDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA  179 (362)
Q Consensus       100 ~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V  179 (362)
                      .+.+++++.+.| ++++|||+|||.++|+|+.|.   .|.+..      ...|.++|.|++|+|+++|+   .|++||+|
T Consensus        16 ~~~l~~~~~~~p-~~~~~evlv~v~a~~~n~~~~---~g~~~~------~~~~~i~G~~~~g~v~~~~~---~~~~GdrV   82 (325)
T TIGR02825        16 DSDFELKTVELP-PLNNGEVLLEALFLSVDPYMR---VAAKRL------KEGDTMMGQQVARVVESKNV---ALPKGTIV   82 (325)
T ss_pred             CCceEEEeccCC-CCCCCcEEEEEEEEecCHHHh---cccCcC------CCCCcEecceEEEEEEeCCC---CCCCCCEE
Confidence            355888899999 899999999999999999654   343321      22367899999999999874   69999999


Q ss_pred             EEecCCCeeeEEEeeCCCeeeC----CCC--CHHH-HHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHH
Q 018013          180 AIMTFGSYAEFTMVPSKHILPV----ARP--DPEV-VAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAK  251 (362)
Q Consensus       180 ~~~~~g~~~~~~~v~~~~~~~i----p~~--~~~~-a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~  251 (362)
                      +++  ++|++|++++.+.+.++    |++  +.++ ++++.+++|||+++.+... ++|++|||+|++|++|++++|+|+
T Consensus        83 ~~~--~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk  160 (325)
T TIGR02825        83 LAS--PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK  160 (325)
T ss_pred             EEe--cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHH
Confidence            976  47999999999988877    664  3444 5688999999999977777 999999999999999999999999


Q ss_pred             HCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-cHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          252 LAGNTVVATCGGEHKAQLLKELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       252 ~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ..|++|+++++++++.+.++++|+++++++++. ++.+.++...++++|++||++|++.+..++++++++|+|+.+|..+
T Consensus       161 ~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~  240 (325)
T TIGR02825       161 LKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS  240 (325)
T ss_pred             HcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchh
Confidence            999999999999999999999999999998874 6666666666778999999999988999999999999999999876


Q ss_pred             cccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          331 QYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ............   ....+..+++++.|++
T Consensus       241 ~~~~~~~~~~~~---~~~~~~~~~~~l~~~~  268 (325)
T TIGR02825       241 TYNRTGPLPPGP---PPEIVIYQELRMEGFI  268 (325)
T ss_pred             hcccCCCCCCCc---chHHHhhhcceEeEEE
Confidence            432211111111   1224677888888764

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=4e-34  Score=271.34  Aligned_cols=249  Identities=29%  Similarity=0.405  Sum_probs=204.0

Q ss_pred             cCceEEEeccC----CCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce--EEEEEEeCCCCCCC
Q 018013          100 RDATIKVRAPL----RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA--VGLIAAVGDSVNNV  173 (362)
Q Consensus       100 ~~~~~~~~~~~----p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~  173 (362)
                      .+.+++++.++    | +|+++||+|||++++||+.|++...|.+..     ....|+++|+++  .|++..+|+++++|
T Consensus        18 ~~~~~~~~~~~~~~~p-~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-----~~~~p~~~g~~~~g~~~~~~v~~~v~~~   91 (338)
T cd08295          18 ESDLELRTTKLTLKVP-PGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-----LYLPPFKPGEVITGYGVAKVVDSGNPDF   91 (338)
T ss_pred             ccceEEEEecCCcCCC-CCCCCeEEEEEEEEeeCHHHHHhhccCCcc-----ccCCCcCCCCeEeccEEEEEEecCCCCC
Confidence            45688898888    6 899999999999999999999998885321     123467788754  45666688999999


Q ss_pred             CCCCeEEEecCCCeeeEEEeeC-CCeeeCC-CC--CH-HHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHH
Q 018013          174 KVGTPAAIMTFGSYAEFTMVPS-KHILPVA-RP--DP-EVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAV  247 (362)
Q Consensus       174 ~~Gd~V~~~~~g~~~~~~~v~~-~~~~~ip-~~--~~-~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~ai  247 (362)
                      ++||+|+++  |+|+||+++|+ ..++++| +.  .. ++++++.+++|||+++.+... ++|++|||+|++|++|++++
T Consensus        92 ~vGd~V~~~--g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~ai  169 (338)
T cd08295          92 KVGDLVWGF--TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVG  169 (338)
T ss_pred             CCCCEEEec--CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHH
Confidence            999999865  68999999999 7899996 33  33 678899999999999987776 99999999999999999999


Q ss_pred             HHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEE
Q 018013          248 QLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       248 qla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~  325 (362)
                      |+|+.+|++|+++++++++.+.+++ +|+++++++.+ .++.+.++...++++|++||++|+..+..++++++++|+|+.
T Consensus       170 qlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~  249 (338)
T cd08295         170 QLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAA  249 (338)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEE
Confidence            9999999999999999999999998 99999999765 477777766666789999999999999999999999999999


Q ss_pred             EcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          326 IGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       326 ~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +|..+...........+    ...++.+++++.|+
T Consensus       250 ~G~~~~~~~~~~~~~~~----~~~~~~~~~~i~g~  280 (338)
T cd08295         250 CGMISQYNLEWPEGVRN----LLNIIYKRVKIQGF  280 (338)
T ss_pred             ecccccCCCCCCCCccC----HHHHhhccceeeEE
Confidence            99765432210000111    13466788888875

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.8e-34  Score=277.12  Aligned_cols=231  Identities=19%  Similarity=0.243  Sum_probs=190.1

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCC-------CCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCc
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIK-------PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFE  158 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e  158 (362)
                      -||+++++.++.     +++++.|.| +++       ++||+|||.++|||++|++++.|.++       ..+|.++|||
T Consensus         2 ~mka~v~~~~~~-----~~~~e~~~P-~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-------~~~p~i~GhE   68 (393)
T TIGR02819         2 GNRGVVYLGPGK-----VEVQDIDYP-KLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-------APTGLVLGHE   68 (393)
T ss_pred             CceEEEEecCCc-----eeEEeccCC-cccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-------CCCCccccce
Confidence            489999986553     788899988 442       69999999999999999999987642       3468899999


Q ss_pred             eEEEEEEeCCCCCCCCCCCeEEEe--------------------------------------cCCCeeeEEEeeCC--Ce
Q 018013          159 AVGLIAAVGDSVNNVKVGTPAAIM--------------------------------------TFGSYAEFTMVPSK--HI  198 (362)
Q Consensus       159 ~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~g~~~~~~~v~~~--~~  198 (362)
                      ++|+|+++|++|++|++||||++.                                      .+|+|+||+++|..  .+
T Consensus        69 ~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l  148 (393)
T TIGR02819        69 ITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNL  148 (393)
T ss_pred             eEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCce
Confidence            999999999999999999999762                                      14899999999964  69


Q ss_pred             eeCCCCC------HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHH
Q 018013          199 LPVARPD------PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLK  271 (362)
Q Consensus       199 ~~ip~~~------~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~  271 (362)
                      +++|++.      ..++++..++.+||+++.....++|++|+|.| +|++|++++|+|+.+|++ |++++.+++|++.++
T Consensus       149 ~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~  227 (393)
T TIGR02819       149 LKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR  227 (393)
T ss_pred             EECCCcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH
Confidence            9999742      23567778899999999764449999999965 799999999999999996 455567788999999


Q ss_pred             HcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChH---------------HHHHHHHHhccCCEEEEEcCcc
Q 018013          272 ELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGD---------------MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       272 ~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~---------------~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ++|++.+....+.++.+.+.+.+ ++++|++||++|..               .++.++++++++|+++.+|...
T Consensus       228 ~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~  302 (393)
T TIGR02819       228 SFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV  302 (393)
T ss_pred             HcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence            99997543333455656555544 46899999999963               7999999999999999999964

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-34  Score=271.71  Aligned_cols=254  Identities=24%  Similarity=0.297  Sum_probs=203.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCC-CCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPI-KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      ||+++++.++     .+++.+.+.| .+ .++||+|||.++|+|++|++......       ....|.++|||++|+|++
T Consensus         1 Mka~~~~~~~-----~~~~~~~~~P-~~~~~~evlV~v~~~gi~~~D~~~~~~~~-------~~~~p~i~G~e~~G~V~~   67 (347)
T PRK10309          1 MKSVVNDTDG-----IVRVAESPIP-EIKHQDDVLVKVASSGLCGSDIPRIFKNG-------AHYYPITLGHEFSGYVEA   67 (347)
T ss_pred             CceEEEeCCC-----ceEEEECCCC-CCCCCCEEEEEEEEEEEchhcHHHHhCCC-------CCCCCcccccceEEEEEE
Confidence            7889998654     3788999998 55 68999999999999999997543211       123577899999999999


Q ss_pred             eCCCCCCCCCCCeEEEec----------------------------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHH
Q 018013          166 VGDSVNNVKVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGL  216 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~----------------------------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~  216 (362)
                      +|++|++|++||+|++.+                            .|+|++|+.+|++.++++|++ ..+.+++..++.
T Consensus        68 vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~  147 (347)
T PRK10309         68 VGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPIT  147 (347)
T ss_pred             eCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHH
Confidence            999999999999998753                            589999999999999999985 334444444566


Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      ++|+++.....++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++++|+++++++++.+..+..+.+.+
T Consensus       148 ~~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~  226 (347)
T PRK10309        148 VGLHAFHLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRE  226 (347)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcC
Confidence            788887544448999999997 699999999999999996 789999999999999999999998876554444444455


Q ss_pred             Ccee-EEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          296 KGFD-IIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~D-vvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++| ++|||+|+ ..+..++++++++|+++.+|.......   +.+.    ....++.|+++|.|++
T Consensus       227 ~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~---~~~~----~~~~~~~~~~~i~g~~  287 (347)
T PRK10309        227 LRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLH---LTSA----TFGKILRKELTVIGSW  287 (347)
T ss_pred             CCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcc---cChh----hhhHHhhcCcEEEEEe
Confidence            6788 99999996 588999999999999999998754211   1111    1224778999999974

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.9e-34  Score=275.74  Aligned_cols=238  Identities=23%  Similarity=0.337  Sum_probs=195.2

Q ss_pred             ceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEE
Q 018013          102 ATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI  181 (362)
Q Consensus       102 ~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  181 (362)
                      .+++.+.+.| .++++||+|||.++|||++|++++.|.++      ...+|.++|||++|+|+++|++|++|++||+|+.
T Consensus        24 ~l~~~~~~~p-~~~~~eVlV~v~~~gic~sD~~~~~g~~~------~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~   96 (360)
T PLN02586         24 VLSPFHFSRR-ENGDEDVTVKILYCGVCHSDLHTIKNEWG------FTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGV   96 (360)
T ss_pred             CceEEeecCC-CCCCCeEEEEEEEecCChhhHhhhcCCcC------CCCCCccCCcceeEEEEEECCCCCccCCCCEEEE
Confidence            4677888888 78999999999999999999999887653      1356889999999999999999999999999974


Q ss_pred             e------------------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHH
Q 018013          182 M------------------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALE  223 (362)
Q Consensus       182 ~------------------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~  223 (362)
                      .                                    .+|+|+||+++|++.++++|++  +.++++++..+.|||+++.
T Consensus        97 ~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~  176 (360)
T PLN02586         97 GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMK  176 (360)
T ss_pred             ccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHH
Confidence            2                                    1489999999999999999985  5677788889999999998


Q ss_pred             HhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH-HHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEE
Q 018013          224 QAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA-QLLKELGVDRVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       224 ~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~-~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      .... ++|++|+|.| +|++|++++|+|+.+|++|++++.++++. +.++++|+++++++.+.   +.++...+ ++|++
T Consensus       177 ~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~---~~~~~~~~-~~D~v  251 (360)
T PLN02586        177 YYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP---EKMKAAIG-TMDYI  251 (360)
T ss_pred             HhcccCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH---HHHHhhcC-CCCEE
Confidence            7766 8999999987 69999999999999999999887776664 45578999999987653   22333333 69999


Q ss_pred             EECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          302 YESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       302 id~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ||++|+ ..++.++++++++|+++.+|..... .  .+.       +..++.|++++.|++
T Consensus       252 id~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~-~--~~~-------~~~~~~~~~~i~g~~  302 (360)
T PLN02586        252 IDTVSAVHALGPLLGLLKVNGKLITLGLPEKP-L--ELP-------IFPLVLGRKLVGGSD  302 (360)
T ss_pred             EECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC-C--ccC-------HHHHHhCCeEEEEcC
Confidence            999996 5788999999999999999975421 1  111       224667888888875

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=4.2e-34  Score=274.51  Aligned_cols=252  Identities=23%  Similarity=0.322  Sum_probs=202.2

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      ..++..+...+..  ..+.+.+.+.| +++++||+|||.++|||++|++++.|.+.      ...+|.++|||++|+|++
T Consensus         4 ~~~a~~~~~~~~~--~~l~~~~~~~p-~~~~~eVlVkV~a~gic~sD~~~~~G~~~------~~~~p~i~GhE~aG~Vv~   74 (375)
T PLN02178          4 QNKAFGWAANDES--GVLSPFHFSRR-ENGENDVTVKILFCGVCHSDLHTIKNHWG------FSRYPIIPGHEIVGIATK   74 (375)
T ss_pred             cceeEEEEEccCC--CCceEEeecCC-CCCCCeEEEEEEEEcCchHHHHHhcCCCC------CCCCCcccCceeeEEEEE
Confidence            3455554443322  24677788888 78999999999999999999999988652      124688999999999999


Q ss_pred             eCCCCCCCCCCCeEEEec------------------------------------CCCeeeEEEeeCCCeeeCCCC--CHH
Q 018013          166 VGDSVNNVKVGTPAAIMT------------------------------------FGSYAEFTMVPSKHILPVARP--DPE  207 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~------------------------------------~g~~~~~~~v~~~~~~~ip~~--~~~  207 (362)
                      +|++|++|++||+|....                                    .|+|+||+++|++.++++|++  +.+
T Consensus        75 vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~  154 (375)
T PLN02178         75 VGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDS  154 (375)
T ss_pred             ECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHH
Confidence            999999999999997411                                    489999999999999999985  456


Q ss_pred             HHHhhhhHHHHHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHHHHHcCCcEEEeCCCc
Q 018013          208 VVAMLTSGLTASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQLLKELGVDRVINYKAE  284 (362)
Q Consensus       208 ~a~l~~~~~tA~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~l~~~g~~~v~~~~~~  284 (362)
                      +++++..+.|||+++.....  ++|++|+|+| +|++|++++|+|+.+|++|++++.++++ .+.++++|+++++++.+.
T Consensus       155 aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~  233 (375)
T PLN02178        155 GAPLLCAGITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS  233 (375)
T ss_pred             cchhhccchHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH
Confidence            77788899999999977654  6899999998 5999999999999999999999877554 677789999999987652


Q ss_pred             cHHHHHHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          285 DIKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       285 ~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                         +.+.+..+ ++|++|||+|+. .++.++++++++|+++.+|..... .  .+.       +..++.|+++|+|++
T Consensus       234 ---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~-~--~~~-------~~~~~~~~~~i~g~~  297 (375)
T PLN02178        234 ---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKP-L--DLP-------IFPLVLGRKMVGGSQ  297 (375)
T ss_pred             ---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCC-C--ccC-------HHHHHhCCeEEEEeC
Confidence               23333333 699999999975 789999999999999999976421 1  111       235778999999975

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=7.2e-34  Score=266.24  Aligned_cols=241  Identities=18%  Similarity=0.303  Sum_probs=188.8

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeC-hhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVN-ASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~-~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      +|++++++.++     .+++++.+.| +++++||+|||.++||| ++|+++..|.++...   ...+|.++|||++|+|+
T Consensus         1 ~~ka~~~~~~~-----~l~~~e~~~p-~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~---~~~~P~i~GhE~~G~V~   71 (308)
T TIGR01202         1 KTQAIVLSGPN-----QIELREVTLT-PPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFP---GMGYPLVPGYESVGRVV   71 (308)
T ss_pred             CceEEEEeCCC-----eEEEEEecCC-CCCCCeEEEEEEEEeeccCchhHHhcCCCCCCC---CCCCCccCcceeEEEEE
Confidence            47888887543     3888999999 78999999999999996 699998888764211   13579999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec----------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHHHHHHhCCCCCCEE
Q 018013          165 AVGDSVNNVKVGTPAAIMT----------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIALEQAGPASGKKV  233 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~----------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~al~~~~~~~g~~V  233 (362)
                      ++|+++ +|++||||+...          .|+|+||+++|++.++++|+. +.++ ++..++.|||+++.+. ..++++|
T Consensus        72 ~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~~~-~~~~~~v  148 (308)
T TIGR01202        72 EAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVAGA-EVKVLPD  148 (308)
T ss_pred             EecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHHhc-ccCCCcE
Confidence            999998 699999998632          599999999999999999986 3444 4455689999999764 3468899


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-HHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFN  311 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~  311 (362)
                      +|+| +|++|++++|+|+++|++ |++++.++++++.++++   +++|+.+.         .+.++|++|||+|+ ..++
T Consensus       149 lV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~---------~~~g~Dvvid~~G~~~~~~  215 (308)
T TIGR01202       149 LIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD---------PRRDYRAIYDASGDPSLID  215 (308)
T ss_pred             EEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc---------cCCCCCEEEECCCCHHHHH
Confidence            9997 799999999999999996 55666667676655443   44554321         24679999999997 4689


Q ss_pred             HHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          312 LCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       312 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++++++++|+++.+|......   ++.       ...++.|++++.|..
T Consensus       216 ~~~~~l~~~G~iv~~G~~~~~~---~~~-------~~~~~~~~~~i~~~~  255 (308)
T TIGR01202       216 TLVRRLAKGGEIVLAGFYTEPV---NFD-------FVPAFMKEARLRIAA  255 (308)
T ss_pred             HHHHhhhcCcEEEEEeecCCCc---ccc-------cchhhhcceEEEEec
Confidence            9999999999999999864321   111       113667889988864

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=3.6e-33  Score=266.14  Aligned_cols=258  Identities=22%  Similarity=0.340  Sum_probs=209.7

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCc-cCCCC----CCCCCCCCCCCCceEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRY-FSDGN----DIGSRLPFDAGFEAVG  161 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~-~~~~~----~~~~~~p~~~G~e~~G  161 (362)
                      ||+++++.++     .+.+++.+.| ++.++||+||+.++++|++|++...+.. .....    ......|.++|+|++|
T Consensus         1 mka~~~~~~~-----~l~~~~~~~p-~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G   74 (351)
T cd08233           1 MKAARYHGRK-----DIRVEEVPEP-PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSG   74 (351)
T ss_pred             CceEEEecCC-----ceEEEeccCC-CCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceE
Confidence            7899998643     3788999999 8899999999999999999998765421 11000    0012368899999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEe---------------------------c--CCCeeeEEEeeCCCeeeCCCC-CHHHHHh
Q 018013          162 LIAAVGDSVNNVKVGTPAAIM---------------------------T--FGSYAEFTMVPSKHILPVARP-DPEVVAM  211 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~---------------------------~--~g~~~~~~~v~~~~~~~ip~~-~~~~a~l  211 (362)
                      +|+++|+++++|++||+|++.                           .  .|+|++|+.++...++++|++ ..+.+++
T Consensus        75 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~  154 (351)
T cd08233          75 VVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAAL  154 (351)
T ss_pred             EEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhh
Confidence            999999999999999999862                           1  589999999999999999986 3444455


Q ss_pred             hhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHH
Q 018013          212 LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF  290 (362)
Q Consensus       212 ~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~  290 (362)
                      ..++.+||+++.....++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++.+.++.+.+
T Consensus       155 ~~~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l  233 (351)
T cd08233         155 VEPLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEV  233 (351)
T ss_pred             ccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHH
Confidence            57888999999444339999999998 69999999999999999 89999999999999999999999999887777766


Q ss_pred             HHHC-CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          291 KEEF-PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       291 ~~~~-~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++.. ++++|++|||+|+ ..++.++++++++|+++.+|..+. ..  .+.       ...++.|+++|.|++
T Consensus       234 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~--~~~-------~~~~~~~~~~i~g~~  296 (351)
T cd08233         234 RKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK-PI--SFN-------PNDLVLKEKTLTGSI  296 (351)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC-CC--ccC-------HHHHHhhCcEEEEEe
Confidence            6554 4579999999984 788999999999999999998752 11  111       235678999999874

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=2.6e-33  Score=266.15  Aligned_cols=252  Identities=26%  Similarity=0.307  Sum_probs=203.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCC-CCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPF-DAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~-~~G~e~~G~V~~  165 (362)
                      |++++++.....    .++++.+.| .+.+++|+|||.++|||++|++.+.|..+.      ...|. ++|||++|+|++
T Consensus         1 m~a~~~~~~~~~----~~~~~~~~p-~~~p~~vlVkv~~~gICGSDlh~~~g~~~~------~~~~~~i~GHE~~G~V~e   69 (350)
T COG1063           1 MKAAVVYVGGGD----VRLEEPPPP-IPGPGDVLIRVTATGICGSDLHIYRGGEPF------VPPGDIILGHEFVGEVVE   69 (350)
T ss_pred             CceeEEEecCCc----cccccCCCC-CCCCCeEEEEEEEEeEchhhhhhccCCCCC------CCCCCcccCccceEEEEE
Confidence            566777665532    235666666 689999999999999999999999987543      23333 899999999999


Q ss_pred             eCCCCCCCCCCCeEEEec---------------------------------CCCeeeEEEeeCCCeee-CCCC-CHHHHH
Q 018013          166 VGDSVNNVKVGTPAAIMT---------------------------------FGSYAEFTMVPSKHILP-VARP-DPEVVA  210 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~---------------------------------~g~~~~~~~v~~~~~~~-ip~~-~~~~a~  210 (362)
                      +| .++.+++||||+..+                                 .|+|+||+++|.+++++ +|++ +.++++
T Consensus        70 vG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aa  148 (350)
T COG1063          70 VG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAA  148 (350)
T ss_pred             ec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhh
Confidence            99 778899999998742                                 27999999999876665 5888 999999


Q ss_pred             hhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH-cCCcEEEeCCCccHH
Q 018013          211 MLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE-LGVDRVINYKAEDIK  287 (362)
Q Consensus       211 l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~  287 (362)
                      +..++.++|++...... +++.+|+|+| +|++|++++++++..|+ +|++++.+++|++++++ .|++.+++...++..
T Consensus       149 l~epla~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~  227 (350)
T COG1063         149 LTEPLATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAG  227 (350)
T ss_pred             hcChhhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHH
Confidence            99999999888544444 6666999999 89999999999999998 89999999999999998 666767666554444


Q ss_pred             HHHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          288 TVFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       288 ~~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ..+.+. .+.|+|++|||+|. ..+..++++++++|+++.+|........         .....++.|+++|.|.
T Consensus       228 ~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~---------~~~~~~~~kel~l~gs  293 (350)
T COG1063         228 AEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIP---------LPAGLVVSKELTLRGS  293 (350)
T ss_pred             HHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCc---------cCHHHHHhcccEEEec
Confidence            444444 45699999999995 5689999999999999999998765321         1134699999999996

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.1e-33  Score=267.25  Aligned_cols=250  Identities=22%  Similarity=0.336  Sum_probs=206.8

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      .+++++.+.++..    +++++++.| +++++||+|||.++++|++|++.+.|.++.      ..+|.++|||++|+|++
T Consensus         9 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~------~~~p~i~G~E~~G~Vv~   77 (357)
T PLN02514          9 KTTGWAARDPSGH----LSPYTYTLR-KTGPEDVVIKVIYCGICHTDLHQIKNDLGM------SNYPMVPGHEVVGEVVE   77 (357)
T ss_pred             eEEEEEEecCCCC----ceEEeecCC-CCCCCcEEEEEEEeccChHHHHhhcCCcCc------CCCCccCCceeeEEEEE
Confidence            3788998887754    788999999 799999999999999999999988886531      24678999999999999


Q ss_pred             eCCCCCCCCCCCeEEEe------------------------------------cCCCeeeEEEeeCCCeeeCCCC--CHH
Q 018013          166 VGDSVNNVKVGTPAAIM------------------------------------TFGSYAEFTMVPSKHILPVARP--DPE  207 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~------------------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~  207 (362)
                      +|+++++|++||+|+..                                    ..|+|+||+++|...++++|++  +.+
T Consensus        78 vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~  157 (357)
T PLN02514         78 VGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQ  157 (357)
T ss_pred             ECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHH
Confidence            99999999999999741                                    1489999999999999999985  567


Q ss_pred             HHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcEEEeCCCcc
Q 018013          208 VVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDRVINYKAED  285 (362)
Q Consensus       208 ~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~v~~~~~~~  285 (362)
                      +++++.++.|||+++.+... ++|++|+|+| +|++|++++|+|+.+|++|+++++++++.+.+ +++|+++++++.+. 
T Consensus       158 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-  235 (357)
T PLN02514        158 AAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA-  235 (357)
T ss_pred             hhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh-
Confidence            77888999999999988777 8999999996 79999999999999999999998888777655 57999987766542 


Q ss_pred             HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          286 IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       286 ~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                        +.+.... .++|++|||+|. ..++.++++++++|+++.+|..... .  .+.       ...++.|++++.|++
T Consensus       236 --~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~-------~~~~~~~~~~i~g~~  299 (357)
T PLN02514        236 --AEMQEAA-DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP-L--QFV-------TPMLMLGRKVITGSF  299 (357)
T ss_pred             --HHHHHhc-CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC-C--ccc-------HHHHhhCCcEEEEEe
Confidence              1222233 369999999995 6889999999999999999987431 1  111       224778999999975

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.1e-33  Score=268.80  Aligned_cols=243  Identities=18%  Similarity=0.222  Sum_probs=192.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      .++++++.++.     +++++.+.| + +++||+|||.++|||++|++++.|.+....  ....+|.++|||++|+|+++
T Consensus         3 ~~~~~~~~~~~-----~~~~~~~~P-~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~--~~~~~P~i~GhE~~G~V~~~   73 (341)
T cd08237           3 NQVYRLVRPKF-----FEVTYEEEN-L-REDWVIVRPTYLSICHADQRYYQGNRSPEA--LKKKLPMALIHEGIGVVVSD   73 (341)
T ss_pred             ccceEEeccce-----EEEeecCCC-C-CCCeEEEEEEEEEEcCccHHHHcCCCCccc--ccCCCCeeccceeEEEEEee
Confidence            35667776552     788898888 5 999999999999999999999998753110  01357999999999999998


Q ss_pred             CCCCCCCCCCCeEEEec-------------------------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHH
Q 018013          167 GDSVNNVKVGTPAAIMT-------------------------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASI  220 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------------------------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~  220 (362)
                      |.+  .|++||||++.+                         +|+|+||+++|++.++++|++ +.+.|+++.++.+||+
T Consensus        74 g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~  151 (341)
T cd08237          74 PTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVH  151 (341)
T ss_pred             CCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHH
Confidence            875  799999998642                         388999999999999999986 4566777789999999


Q ss_pred             HHHHhC---CCCCCEEEEEcCCchHHHHHHHHHHH-CC-CEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          221 ALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKL-AG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       221 al~~~~---~~~g~~VlI~ga~g~vG~~aiqla~~-~G-~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      ++....   .++|++|+|+| +|++|++++|+++. .| ++|++++++++|++.+++.+.+..++    ++      ...
T Consensus       152 a~~~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~------~~~  220 (341)
T cd08237         152 AISRFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DI------PED  220 (341)
T ss_pred             HHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hh------hhc
Confidence            986532   38899999999 69999999999986 66 58999999999999998866654331    11      112


Q ss_pred             CceeEEEECCCh----HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          296 KGFDIIYESVGG----DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++|+|||++|+    ..++.++++++++|+++.+|..... .  ++.       ...++.|+++|.|++
T Consensus       221 ~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~-------~~~~~~k~~~i~g~~  280 (341)
T cd08237         221 LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYP-V--PIN-------TRMVLEKGLTLVGSS  280 (341)
T ss_pred             cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCC-c--ccC-------HHHHhhCceEEEEec
Confidence            369999999995    4688999999999999999975321 1  111       235788999999975

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=6.8e-33  Score=265.20  Aligned_cols=254  Identities=29%  Similarity=0.409  Sum_probs=209.7

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG  167 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG  167 (362)
                      |+++++..+    +.+++++.+.| .++++||+|+|.++++|++|++...|.++.      ..+|.++|+|++|+|+++|
T Consensus         2 ka~~~~~~~----~~l~~~~~~~p-~~~~~evlV~v~a~~l~~~d~~~~~g~~~~------~~~p~~~G~e~~G~V~~vG   70 (361)
T cd08231           2 RAAVLTGPG----KPLEIREVPLP-DLEPGAVLVRVRLAGVCGSDVHTVAGRRPR------VPLPIILGHEGVGRVVALG   70 (361)
T ss_pred             eEEEEcCCC----CCCEEEeccCC-CCCCCeEEEEEEEEeecCccHHHhcCCCCC------CCCCcccccCCceEEEEeC
Confidence            677887655    34889999999 799999999999999999999998886531      3467889999999999999


Q ss_pred             CCCCC------CCCCCeEEEe-----------------------------------cCCCeeeEEEeeCC-CeeeCCCC-
Q 018013          168 DSVNN------VKVGTPAAIM-----------------------------------TFGSYAEFTMVPSK-HILPVARP-  204 (362)
Q Consensus       168 ~~v~~------~~~Gd~V~~~-----------------------------------~~g~~~~~~~v~~~-~~~~ip~~-  204 (362)
                      ++|+.      |++||+|+..                                   ..|+|++|+.++++ .++++|++ 
T Consensus        71 ~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~  150 (361)
T cd08231          71 GGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNV  150 (361)
T ss_pred             CCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCC
Confidence            99986      9999999876                                   24899999999996 79999985 


Q ss_pred             C-HHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeC
Q 018013          205 D-PEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINY  281 (362)
Q Consensus       205 ~-~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~  281 (362)
                      + ..+++++.+++|||+++..... ++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus       151 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~  229 (361)
T cd08231         151 PDEVAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDI  229 (361)
T ss_pred             CHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcC
Confidence            3 4455566899999999988887 6999999997 69999999999999999 99999999999999999999999888


Q ss_pred             CCccHH---HHHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeE
Q 018013          282 KAEDIK---TVFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQT  356 (362)
Q Consensus       282 ~~~~~~---~~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  356 (362)
                      ++.+..   ..+.+. .++++|++|||+|+ ..+..++++++++|+|+.+|..+....   .   +++  ...++.++++
T Consensus       230 ~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~---~~~--~~~~~~~~~~  301 (361)
T cd08231         230 DELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGT---V---PLD--PERIVRKNLT  301 (361)
T ss_pred             cccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCc---c---ccC--HHHHhhcccE
Confidence            754332   334443 45789999999985 678899999999999999997653111   0   111  1246788888


Q ss_pred             EEEec
Q 018013          357 VVCIH  361 (362)
Q Consensus       357 i~G~~  361 (362)
                      +.|++
T Consensus       302 ~~~~~  306 (361)
T cd08231         302 IIGVH  306 (361)
T ss_pred             EEEcc
Confidence            88875

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1e-32  Score=261.27  Aligned_cols=251  Identities=27%  Similarity=0.383  Sum_probs=213.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.    .+++++.+.| +++++||+|++.++++|++|++...|.++.      ...|.++|||++|+|+++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~------~~~p~~~g~e~~G~v~~v   69 (333)
T cd08296           1 YKAVQVTEPGG----PLELVERDVP-LPGPGEVLIKVEACGVCHSDAFVKEGAMPG------LSYPRVPGHEVVGRIDAV   69 (333)
T ss_pred             CeEEEEccCCC----CceEEeccCC-CCCCCEEEEEEEEEecchHHHHHHhCCCCC------CCCCcccCcceeEEEEEE
Confidence            78999987643    3788899988 689999999999999999999988886531      245778999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------c-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------T-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |+++++|++||+|++.                            . .|++++|+.++...++++|++  +.++++++.++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~  149 (333)
T cd08296          70 GEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAG  149 (333)
T ss_pred             CCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhh
Confidence            9999999999999862                            1 489999999999999999985  45677788999


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .+||+++.....+++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++++|+++++++...++.+.+...  
T Consensus       150 ~ta~~~~~~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~--  226 (333)
T cd08296         150 VTTFNALRNSGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL--  226 (333)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc--
Confidence            9999999877349999999999 8999999999999999999999999999999999999999998877766655544  


Q ss_pred             CceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          296 KGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++|+++|+.| +..+..++++++++|+++.+|......   ++     +  ...++.|++++.|+.
T Consensus       227 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~-----~--~~~~~~~~~~i~~~~  283 (333)
T cd08296         227 GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPV---AV-----S--PLQLIMGRKSIHGWP  283 (333)
T ss_pred             CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCC---Cc-----C--HHHHhhcccEEEEeC
Confidence            46999999986 678899999999999999999876211   11     1  235779999999864

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=8.5e-33  Score=262.28  Aligned_cols=263  Identities=23%  Similarity=0.265  Sum_probs=215.2

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCC-CeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKP-NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~-~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      ||++++...+.. .+.+.+++.|.| ++.+ ++|+||+.++|+|+.|+....|..+.... .....|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~~p-~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~-~~~~~~~~~g~e~~G~V~~   77 (341)
T cd08290           1 AKALVYTEHGEP-KEVLQLESYEIP-PPGPPNEVLVKMLAAPINPADINQIQGVYPIKPP-TTPEPPAVGGNEGVGEVVK   77 (341)
T ss_pred             CceEEEccCCCc-hhheEEeecCCC-CCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCc-ccCCCCCCCCcceEEEEEE
Confidence            789999876532 245788899988 5676 99999999999999999998886532110 0012577899999999999


Q ss_pred             eCCCCCCCCCCCeEEEecC--CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCc
Q 018013          166 VGDSVNNVKVGTPAAIMTF--GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAG  240 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~~--g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g  240 (362)
                      +|+++..|++||+|++...  |+|++|+.++.+.++++|++  ..++++++..+.|||+++..... ++|++|||+|++|
T Consensus        78 vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g  157 (341)
T cd08290          78 VGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANS  157 (341)
T ss_pred             eCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchh
Confidence            9999999999999998864  99999999999999999985  45777788899999999987766 9999999999999


Q ss_pred             hHHHHHHHHHHHCCCEEEEecCCH----hHHHHHHHcCCcEEEeCCCc---cHHHHHHHHCCCceeEEEECCChHHHHHH
Q 018013          241 GTGQFAVQLAKLAGNTVVATCGGE----HKAQLLKELGVDRVINYKAE---DIKTVFKEEFPKGFDIIYESVGGDMFNLC  313 (362)
Q Consensus       241 ~vG~~aiqla~~~G~~Vi~~~~~~----~~~~~l~~~g~~~v~~~~~~---~~~~~~~~~~~~g~Dvvid~~g~~~~~~~  313 (362)
                      ++|++++|+|+..|++|+++++++    ++.+.++++|+++++++...   ++...+....++++|++|||+|+..+..+
T Consensus       158 ~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~  237 (341)
T cd08290         158 AVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATEL  237 (341)
T ss_pred             HHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHH
Confidence            999999999999999999998876    67888889999999988765   66666655544489999999999888889


Q ss_pred             HHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          314 LKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       314 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++++++|+|+.+|........  +.       ...++.|+.++.++.
T Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~--~~-------~~~~~~~~~~~~~~~  276 (341)
T cd08290         238 ARLLSPGGTMVTYGGMSGQPVT--VP-------TSLLIFKDITLRGFW  276 (341)
T ss_pred             HHHhCCCCEEEEEeccCCCCcc--cC-------HHHHhhCCceEEEEe
Confidence            9999999999999875543211  11       113567888888764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.2e-32  Score=260.59  Aligned_cols=233  Identities=24%  Similarity=0.270  Sum_probs=199.2

Q ss_pred             eEEEEeccC-CCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           88 EKLVVHTLN-HNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        88 ~a~~~~~~~-~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++..+. ....+.+++.+.|.| ++.++||+|||.++++|+.|+++..|..+      ...+|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~------~~~~~~~~g~e~~G~V~~v   73 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKP-KPGGRDLLVEVKAISVNPVDTKVRARMAP------EAGQPKILGWDAAGVVVAV   73 (336)
T ss_pred             CceeeccccCCCCcccceecccCCC-CCCCCEEEEEEEEEEcChHHHHHHcCCCC------CCCCCcccceeeEEEEEEe
Confidence            456666541 011345788888999 79999999999999999999998877542      1345778999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CC-----CCEEE
Q 018013          167 GDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-AS-----GKKVL  234 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~-----g~~Vl  234 (362)
                      |++|+.|++||+|+++.    +|+|++|++++++.++++|++  +.+++.++.++.|||+++..... ++     |++||
T Consensus        74 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vl  153 (336)
T TIGR02817        74 GDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALL  153 (336)
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEE
Confidence            99999999999999875    699999999999999999985  56788899999999999977766 66     99999


Q ss_pred             EEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC-hHHHHH
Q 018013          235 VTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNL  312 (362)
Q Consensus       235 I~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g-~~~~~~  312 (362)
                      |+|++|++|++++|+|+.+ |++|+++++++++.+.++++|+++++++.. ++.+.+....++++|+++|+++ ++.+..
T Consensus       154 V~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~  232 (336)
T TIGR02817       154 IIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKE  232 (336)
T ss_pred             EEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence            9999999999999999998 999999999999999999999999998654 5666666565678999999985 578899


Q ss_pred             HHHHhccCCEEEEEcC
Q 018013          313 CLKALAVYGRLIVIGM  328 (362)
Q Consensus       313 ~~~~l~~~G~~v~~G~  328 (362)
                      ++++++++|+|+.++.
T Consensus       233 ~~~~l~~~G~~v~~~~  248 (336)
T TIGR02817       233 IVELLAPQGRFALIDD  248 (336)
T ss_pred             HHHHhccCCEEEEEcc
Confidence            9999999999998854

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=9.3e-33  Score=263.19  Aligned_cols=241  Identities=25%  Similarity=0.347  Sum_probs=198.5

Q ss_pred             eEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEe
Q 018013          103 TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM  182 (362)
Q Consensus       103 ~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  182 (362)
                      +++++.|.| .++++||+|||.++|+|++|++...+.+..     ...+|.++|||++|+|+++|++++.+ +||+|++.
T Consensus        11 ~~~~~~p~P-~~~~~evlVrv~~~gic~sD~~~~~~~~~~-----~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~   83 (349)
T TIGR03201        11 MVKTRVEIP-ELGAGDVVVKVAGCGVCHTDLSYYYMGVRT-----NHALPLALGHEISGRVIQAGAGAASW-IGKAVIVP   83 (349)
T ss_pred             ceEEeccCC-CCCCCeEEEEEEEEeecccchHHHcCCCCc-----cCCCCeeccccceEEEEEeCCCcCCC-CCCEEEEC
Confidence            678899999 799999999999999999999876443221     23468899999999999999999887 99999862


Q ss_pred             ----------------------------cCCCeeeEEEeeCCCeeeCCC------C--CHHHHHhhhhHHHHHHHHHHhC
Q 018013          183 ----------------------------TFGSYAEFTMVPSKHILPVAR------P--DPEVVAMLTSGLTASIALEQAG  226 (362)
Q Consensus       183 ----------------------------~~g~~~~~~~v~~~~~~~ip~------~--~~~~a~l~~~~~tA~~al~~~~  226 (362)
                                                  ..|+|+||+.+|.+.++++|+      +  ...+++++.++.+||+++....
T Consensus        84 ~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~~~  163 (349)
T TIGR03201        84 AVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAG  163 (349)
T ss_pred             CCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHhcC
Confidence                                        258999999999999999997      4  3456677889999999998654


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc---cHHHHHHHHC-CCcee---
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE---DIKTVFKEEF-PKGFD---  299 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~---~~~~~~~~~~-~~g~D---  299 (362)
                      .++|++|+|+|+ |++|++++|+|+.+|++|++++++++++++++++|+++++++.+.   ++.+.+++.+ +.|+|   
T Consensus       164 ~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~  242 (349)
T TIGR03201       164 LKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTG  242 (349)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCc
Confidence            499999999997 999999999999999999999999999999999999999987664   3445555443 46776   


Q ss_pred             -EEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          300 -IIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       300 -vvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                       ++|||+|+ ..++.++++++++|+++.+|.......   +   +    ...++.+++++.|.+
T Consensus       243 d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~---~---~----~~~~~~~~~~~~g~~  296 (349)
T TIGR03201       243 WKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTE---Y---R----LSNLMAFHARALGNW  296 (349)
T ss_pred             CEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcc---c---C----HHHHhhcccEEEEEe
Confidence             89999996 567789999999999999998754211   1   1    124667788888865

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2e-32  Score=264.99  Aligned_cols=269  Identities=26%  Similarity=0.371  Sum_probs=213.1

Q ss_pred             CCCccceEEEEeccC-CCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCC---CCCCCCCC-CCCC
Q 018013           82 QLPESFEKLVVHTLN-HNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG---NDIGSRLP-FDAG  156 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~-~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~---~~~~~~~p-~~~G  156 (362)
                      .+|.+|++++++... .++.+.+++++.+.| .++++||+|++.++++|.+|++...|......   +......| .++|
T Consensus         8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p-~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G   86 (393)
T cd08246           8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVP-ELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGG   86 (393)
T ss_pred             cCchhhhheeeecccCCCcccceEEeecCCC-CCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccc
Confidence            378999999986432 223346889999999 79999999999999999999988776511000   00001122 4789


Q ss_pred             CceEEEEEEeCCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC--C
Q 018013          157 FEAVGLIAAVGDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP--D  205 (362)
Q Consensus       157 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~--~  205 (362)
                      ||++|+|+++|++++.|++||+|++..                             .|+|++|++++...++++|++  .
T Consensus        87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~  166 (393)
T cd08246          87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSW  166 (393)
T ss_pred             cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCH
Confidence            999999999999999999999998864                             389999999999999999985  4


Q ss_pred             HHHHHhhhhHHHHHHHHHHh--CC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          206 PEVVAMLTSGLTASIALEQA--GP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       206 ~~~a~l~~~~~tA~~al~~~--~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      .+++.++.++.|||+++...  .. +++++|+|+|++|++|++++++|+.+|++++++++++++.+.++++|++++++++
T Consensus       167 ~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~  246 (393)
T cd08246         167 EEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRR  246 (393)
T ss_pred             HHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence            56667889999999999765  44 8999999999889999999999999999999999999999999999999998864


Q ss_pred             Cc----------------------cHHHHHHHHC-CC-ceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCC
Q 018013          283 AE----------------------DIKTVFKEEF-PK-GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       283 ~~----------------------~~~~~~~~~~-~~-g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~  338 (362)
                      +.                      .+.+.+.+.+ +. ++|++|||+|+..+..++++++++|+|+.+|........   
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---  323 (393)
T cd08246         247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT---  323 (393)
T ss_pred             ccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC---
Confidence            32                      1334444443 44 899999999998899999999999999999976543211   


Q ss_pred             CCCChhhHHHHHHhcCeEEEEe
Q 018013          339 QPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       339 ~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                        .+    ...++.++.++.|.
T Consensus       324 --~~----~~~l~~~~~~i~g~  339 (393)
T cd08246         324 --YD----NRYLWMRQKRIQGS  339 (393)
T ss_pred             --Cc----HHHHhhheeEEEec
Confidence              11    22355667777665

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.2e-32  Score=265.92  Aligned_cols=264  Identities=17%  Similarity=0.147  Sum_probs=198.6

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhh-cCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFS-SGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~-~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .|++++++.++     .+++++.|.| +++++||+|||.++|||++|++.+ .|.+..........+|+++|||++|+|+
T Consensus         2 ~~~a~~~~~~~-----~l~~~e~p~P-~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~   75 (410)
T cd08238           2 KTKAWRMYGKG-----DLRLEKFELP-EIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTIL   75 (410)
T ss_pred             CcEEEEEEcCC-----ceEEEecCCC-CCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEE
Confidence            47888888755     2888999999 789999999999999999999976 4542110000012468899999999999


Q ss_pred             EeCCCCC-CCCCCCeEEEec-----------------CCCeeeEEEeeCC----CeeeCCCC-CHHHHHhhhhHH---HH
Q 018013          165 AVGDSVN-NVKVGTPAAIMT-----------------FGSYAEFTMVPSK----HILPVARP-DPEVVAMLTSGL---TA  218 (362)
Q Consensus       165 ~vG~~v~-~~~~Gd~V~~~~-----------------~g~~~~~~~v~~~----~~~~ip~~-~~~~a~l~~~~~---tA  218 (362)
                      ++|++|+ +|++||||++.+                 +|+|+||+++|.+    .++++|++ ..+.+++..++.   ++
T Consensus        76 ~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~  155 (410)
T cd08238          76 KVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGA  155 (410)
T ss_pred             EeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHH
Confidence            9999998 699999998752                 4899999999987    58999986 334444332322   23


Q ss_pred             HHHH--------HHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEecCCHhHHHHHHHc--------CCc-E
Q 018013          219 SIAL--------EQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN---TVVATCGGEHKAQLLKEL--------GVD-R  277 (362)
Q Consensus       219 ~~al--------~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~---~Vi~~~~~~~~~~~l~~~--------g~~-~  277 (362)
                      +.++        .+... ++|++|+|+|++|++|++++|+|+.+|+   +|++++.+++|++.++++        |++ +
T Consensus       156 ~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~  235 (410)
T cd08238         156 YTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL  235 (410)
T ss_pred             hhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE
Confidence            3332        23344 8999999999999999999999999864   899999999999999987        776 5


Q ss_pred             EEeCCC-ccHHHHHHHH-CCCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcC
Q 018013          278 VINYKA-EDIKTVFKEE-FPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKS  354 (362)
Q Consensus       278 v~~~~~-~~~~~~~~~~-~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~  354 (362)
                      ++++.+ .++.+.+++. .++++|++||++| ...++.++++++++|+++.++.........     .  .....++.|+
T Consensus       236 ~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~-----~--~~~~~~~~~~  308 (410)
T cd08238         236 YVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSA-----P--LNFYNVHYNN  308 (410)
T ss_pred             EECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccc-----c--ccHHHhhhcC
Confidence            677764 5666666554 4568999999998 478899999999999988775432111000     1  1123588999


Q ss_pred             eEEEEecC
Q 018013          355 QTVVCIHG  362 (362)
Q Consensus       355 ~~i~G~~g  362 (362)
                      ++|+|+++
T Consensus       309 ~~i~g~~~  316 (410)
T cd08238         309 THYVGTSG  316 (410)
T ss_pred             cEEEEeCC
Confidence            99999753

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.8e-32  Score=260.54  Aligned_cols=255  Identities=25%  Similarity=0.333  Sum_probs=212.9

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      ++|||++++..+..    +++++.+.| ++.++||+||+.++++|++|++...|.++       ..+|.++|+|++|+|+
T Consensus         1 ~~~~a~~~~~~~~~----~~~~~~~~p-~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-------~~~p~v~G~e~~G~V~   68 (365)
T cd08278           1 MKTTAAVVREPGGP----FVLEDVELD-DPRPDEVLVRIVATGICHTDLVVRDGGLP-------TPLPAVLGHEGAGVVE   68 (365)
T ss_pred             CccEEeeeccCCCc----ceEEEeecC-CCCCCeEEEEEEEeecCcccHHHhcCCCC-------CCCCcccccceeEEEE
Confidence            36899999875433    678888888 78999999999999999999999888653       3357789999999999


Q ss_pred             EeCCCCCCCCCCCeEEEe--------------------------------------------------cCCCeeeEEEee
Q 018013          165 AVGDSVNNVKVGTPAAIM--------------------------------------------------TFGSYAEFTMVP  194 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~--------------------------------------------------~~g~~~~~~~v~  194 (362)
                      ++|+++.+|++||+|++.                                                  ..|+|++|+.++
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~  148 (365)
T cd08278          69 AVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVH  148 (365)
T ss_pred             EeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEec
Confidence            999999999999999851                                                  248999999999


Q ss_pred             CCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHH
Q 018013          195 SKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLL  270 (362)
Q Consensus       195 ~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l  270 (362)
                      .+.++++|++  +..++.++..+.+||+++..... +++++|+|+| +|++|++++|+|+..|+ .|++++++++|.+.+
T Consensus       149 ~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~  227 (365)
T cd08278         149 ERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA  227 (365)
T ss_pred             chhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            9999999985  56777889999999999877776 8999999996 69999999999999999 699999999999999


Q ss_pred             HHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHH
Q 018013          271 KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEK  349 (362)
Q Consensus       271 ~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~  349 (362)
                      +++|+++++++.+.++.+.+....++++|+++||+|+ ..+..++++++++|+++.+|..+..... .+   +    ...
T Consensus       228 ~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~---~----~~~  299 (365)
T cd08278         228 KELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEV-TL---D----VND  299 (365)
T ss_pred             HHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCcc-cc---C----HHH
Confidence            9999999999887776665555447789999999985 7889999999999999999986422110 01   1    123


Q ss_pred             HHhcCeEEEEe
Q 018013          350 ILAKSQTVVCI  360 (362)
Q Consensus       350 ~~~k~~~i~G~  360 (362)
                      ++.+++++.++
T Consensus       300 ~~~~~~~~~~~  310 (365)
T cd08278         300 LLVSGKTIRGV  310 (365)
T ss_pred             HhhcCceEEEe
Confidence            44778887765

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=252.26  Aligned_cols=238  Identities=28%  Similarity=0.395  Sum_probs=205.0

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +|||++++..+..  ..+.+++.+.| ++.++||+|+|.++++|+.|+....|.++.     ....|.++|+|++|+|++
T Consensus         1 ~m~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-----~~~~~~~~g~e~~G~v~~   72 (334)
T PTZ00354          1 MMRAVTLKGFGGV--DVLKIGESPKP-APKRNDVLIKVSAAGVNRADTLQRQGKYPP-----PPGSSEILGLEVAGYVED   72 (334)
T ss_pred             CcEEEEEEecCCC--cceEEEeCCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCC-----CCCCCcccceeeEEEEEE
Confidence            6999999876642  34667777777 789999999999999999999988876532     233456799999999999


Q ss_pred             eCCCCCCCCCCCeEEEe-cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCch
Q 018013          166 VGDSVNNVKVGTPAAIM-TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGG  241 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~-~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~  241 (362)
                      +|++++.+++||+|+++ ..|+|++|++++.+.++++|++  ..+++.++.++.+||+++..... ++|++|+|+|++|+
T Consensus        73 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~  152 (334)
T PTZ00354         73 VGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASG  152 (334)
T ss_pred             eCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence            99999999999999998 4599999999999999999985  45677788999999999988777 99999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCcc-HHHHHHHH-CCCceeEEEECCChHHHHHHHHHhcc
Q 018013          242 TGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAED-IKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAV  319 (362)
Q Consensus       242 vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~-~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~  319 (362)
                      +|++++++|+..|++++++++++++.+.++++|+++++++...+ +.+.+... .++++|++|||++++.+..+++++++
T Consensus       153 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~  232 (334)
T PTZ00354        153 VGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAV  232 (334)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcc
Confidence            99999999999999988899999999999999999999887654 55555544 45789999999999999999999999


Q ss_pred             CCEEEEEcCccc
Q 018013          320 YGRLIVIGMISQ  331 (362)
Q Consensus       320 ~G~~v~~G~~~~  331 (362)
                      +|+|+.+|....
T Consensus       233 ~g~~i~~~~~~~  244 (334)
T PTZ00354        233 DGKWIVYGFMGG  244 (334)
T ss_pred             CCeEEEEecCCC
Confidence            999999986543

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=7.6e-32  Score=255.65  Aligned_cols=253  Identities=27%  Similarity=0.414  Sum_probs=212.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.    .+.+.+.+.| ++.+++|+|++.++++|++|++...|.++...   ...+|.++|+|++|+|+++
T Consensus         1 ~ka~~~~~~~~----~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~---~~~~~~~~G~e~~G~V~~v   72 (340)
T cd05284           1 MKAARLYEYGK----PLRLEDVPVP-EPGPGQVLVRVGGAGVCHSDLHVIDGVWGGIL---PYKLPFTLGHENAGWVEEV   72 (340)
T ss_pred             CeeeEeccCCC----CceEEeCCCC-CCCCCeEEEEEEEEeecchhHHHHcCCCcccc---cCCCCeecccceeEEEEEe
Confidence            68889887643    3678888888 78999999999999999999999888764311   3456788999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |+++..|++||+|++..                            .|+|++|+.++.+.++++|++  ..++++++..+.
T Consensus        73 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~  152 (340)
T cd05284          73 GSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGL  152 (340)
T ss_pred             CCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHH
Confidence            99999999999999764                            589999999999999999985  567788889999


Q ss_pred             HHHHHHHHh-CC-CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH
Q 018013          217 TASIALEQA-GP-ASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       217 tA~~al~~~-~~-~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~  293 (362)
                      |||+++.+. .. +++++|||+| +|++|++++|+|+..| .+|+++++++++.+.++++|+++++++... +.+.+...
T Consensus       153 ta~~~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~  230 (340)
T cd05284         153 TAYHAVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVREL  230 (340)
T ss_pred             HHHHHHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHH
Confidence            999999886 34 8899999999 6779999999999999 799999999999999999999999998876 66656554


Q ss_pred             C-CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          294 F-PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       294 ~-~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      . +.++|+++||+|+ ..++.++++|+++|+|+.+|..+. ..   +.       ....+.|++++.++
T Consensus       231 ~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~---~~-------~~~~~~~~~~~~~~  288 (340)
T cd05284         231 TGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GR---LP-------TSDLVPTEISVIGS  288 (340)
T ss_pred             hCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-Cc---cC-------HHHhhhcceEEEEE
Confidence            4 4689999999995 788999999999999999997653 11   11       01235788888775

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=1.4e-31  Score=251.94  Aligned_cols=254  Identities=24%  Similarity=0.337  Sum_probs=208.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+..  +.+++++.|.| .+.++||+|++.++++|++|+....|.++.     ...+|.++|+|++|+|+++
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~v~~~   72 (325)
T cd05280           1 FKALVVEEQDGG--VSLFLRTLPLD-DLPEGDVLIRVHYSSLNYKDALAATGNGGV-----TRNYPHTPGIDAAGTVVSS   72 (325)
T ss_pred             CceEEEcccCCC--CcceEEeCCCC-CCCCCeEEEEEEEeecChHHHHHhcCCCCC-----CCCCCCccCcccEEEEEEe
Confidence            788999876632  45888999998 799999999999999999999998887532     1335778999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC---C-CCCEE
Q 018013          167 GDSVNNVKVGTPAAIMT-------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP---A-SGKKV  233 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~---~-~g~~V  233 (362)
                        +++.|++||+|++..       .|+|++|+.+|.+.++++|++  +.+++.++..+.+||+++.....   + .+++|
T Consensus        73 --~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~v  150 (325)
T cd05280          73 --DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPV  150 (325)
T ss_pred             --CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEE
Confidence              467899999999863       689999999999999999985  56777888999999999876543   3 45799


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLC  313 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~  313 (362)
                      +|+|++|++|++++|+|+.+|++|+++++++++.++++++|++++++..+.. ....+...++++|++||++|+..+..+
T Consensus       151 lI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~~~~~~~~~~  229 (325)
T cd05280         151 LVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLL-DESKKPLLKARWAGAIDTVGGDVLANL  229 (325)
T ss_pred             EEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHH-HHHHHHhcCCCccEEEECCchHHHHHH
Confidence            9999999999999999999999999999999999999999999998876432 233344455679999999999999999


Q ss_pred             HHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          314 LKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       314 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +++++++|+|+.+|........  +.       +..++.|++++.++
T Consensus       230 ~~~l~~~g~~v~~g~~~~~~~~--~~-------~~~~~~~~~~~~~~  267 (325)
T cd05280         230 LKQTKYGGVVASCGNAAGPELT--TT-------VLPFILRGVSLLGI  267 (325)
T ss_pred             HHhhcCCCEEEEEecCCCCccc--cc-------cchheeeeeEEEEE
Confidence            9999999999999987543211  11       11244678887775

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.1e-31  Score=257.98  Aligned_cols=232  Identities=25%  Similarity=0.331  Sum_probs=198.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+.++...+..    +.+++.|.| ++.++||+|||.++|+|++|++...|.++       ..+|+++|||++|+|+++
T Consensus         8 ~~a~~~~~~~~~----~~l~~~p~p-~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-------~~~p~v~G~e~~G~V~~v   75 (373)
T cd08299           8 CKAAVLWEPKKP----FSIEEIEVA-PPKAHEVRIKIVATGICRSDDHVVSGKLV-------TPFPVILGHEAAGIVESV   75 (373)
T ss_pred             eEEEEEecCCCC----cEEEEeecC-CCCCCEEEEEEEEEEcCcccHHHhcCCCC-------CCCCccccccceEEEEEe
Confidence            888888875543    678899998 78999999999999999999999988652       346788999999999999


Q ss_pred             CCCCCCCCCCCeEEEe-------------------------------------------------cCCCeeeEEEeeCCC
Q 018013          167 GDSVNNVKVGTPAAIM-------------------------------------------------TFGSYAEFTMVPSKH  197 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~-------------------------------------------------~~g~~~~~~~v~~~~  197 (362)
                      |++++.|++||+|++.                                                 ..|+|+||++++.+.
T Consensus        76 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~  155 (373)
T cd08299          76 GEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIA  155 (373)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccc
Confidence            9999999999999875                                                 248999999999999


Q ss_pred             eeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHc
Q 018013          198 ILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKEL  273 (362)
Q Consensus       198 ~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~  273 (362)
                      ++++|++  +.+++.++.++.+||+++..... ++|++|+|+| +|++|++++++|+..|+ +|+++++++++++.++++
T Consensus       156 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~l  234 (373)
T cd08299         156 VAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKEL  234 (373)
T ss_pred             eeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence            9999985  55677777899999999877666 9999999996 79999999999999999 899999999999999999


Q ss_pred             CCcEEEeCCCcc--HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHh-ccCCEEEEEcCccc
Q 018013          274 GVDRVINYKAED--IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKAL-AVYGRLIVIGMISQ  331 (362)
Q Consensus       274 g~~~v~~~~~~~--~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l-~~~G~~v~~G~~~~  331 (362)
                      |++++++..+.+  +.+.+....++++|+++||+|+ ..+..++..+ +++|+|+.+|....
T Consensus       235 Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~  296 (373)
T cd08299         235 GATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS  296 (373)
T ss_pred             CCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC
Confidence            999999876533  5555555555689999999995 6677766655 67999999998754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=2.2e-31  Score=250.88  Aligned_cols=254  Identities=25%  Similarity=0.352  Sum_probs=205.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+..  +.+.+++.+.| .+.++||+|++.++++|++|.....+...     ....+|.++|||++|+|+++
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~p-~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-----~~~~~~~~~g~e~~G~V~~~   72 (326)
T cd08289           1 FQALVVEKDEDD--VSVSVKNLTLD-DLPEGDVLIRVAYSSVNYKDGLASIPGGK-----IVKRYPFIPGIDLAGTVVES   72 (326)
T ss_pred             CeeEEEeccCCc--ceeEEEEccCC-CCCCCeEEEEEEEEecChHHhhhhcCCcc-----ccCCCCcCcccceeEEEEEc
Confidence            789999876542  46788899998 79999999999999999999876643211     12345778999999999996


Q ss_pred             CCCCCCCCCCCeEEEec-------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhC---C-CCCCEE
Q 018013          167 GDSVNNVKVGTPAAIMT-------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAG---P-ASGKKV  233 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~---~-~~g~~V  233 (362)
                      |  +..|++||+|++..       .|+|++|+.+|.+.++++|++  +.+++.++..+.|||+++....   . .++++|
T Consensus        73 ~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~v  150 (326)
T cd08289          73 N--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPV  150 (326)
T ss_pred             C--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEE
Confidence            4  57899999999875       699999999999999999985  4667778888999999886543   2 457899


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLC  313 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~  313 (362)
                      +|+|++|++|++++|+|+.+|++|+++++++++.+.++++|+++++++++.. .+.+....++++|++|||+|+..+..+
T Consensus       151 lI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~vld~~g~~~~~~~  229 (326)
T cd08289         151 LVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQ-EESIKPLEKQRWAGAVDPVGGKTLAYL  229 (326)
T ss_pred             EEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHH-HHHHHhhccCCcCEEEECCcHHHHHHH
Confidence            9999999999999999999999999999999999999999999998876542 334444456789999999999899999


Q ss_pred             HHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          314 LKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       314 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +++++++|+++.+|..+.....  +.       ...++.+++++.|+
T Consensus       230 ~~~l~~~G~~i~~g~~~~~~~~--~~-------~~~~~~~~~~~~~~  267 (326)
T cd08289         230 LSTLQYGGSVAVSGLTGGGEVE--TT-------VFPFILRGVNLLGI  267 (326)
T ss_pred             HHHhhcCCEEEEEeecCCCCCC--cc-------hhhhhhccceEEEE
Confidence            9999999999999987432211  11       11355788888875

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=5e-31  Score=247.96  Aligned_cols=258  Identities=30%  Similarity=0.407  Sum_probs=211.7

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+..  ..+.+.+.+.| .+.+++|+|++.++++|++|++...|..+...   ....|.++|+|++|+|+++
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~---~~~~p~~~g~e~~G~v~~~   74 (324)
T cd08244           1 MRAIRLHEFGPP--EVLVPEDVPDP-VPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPF---PPELPYVPGGEVAGVVDAV   74 (324)
T ss_pred             CeEEEEcCCCCc--cceEEeccCCC-CCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCC---CCCCCcCCccceEEEEEEe
Confidence            688888764432  34666677776 68999999999999999999998888653211   2345678999999999999


Q ss_pred             CCCCCCCCCCCeEEEec---CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCc
Q 018013          167 GDSVNNVKVGTPAAIMT---FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAG  240 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~---~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g  240 (362)
                      |++++.+++||+|+++.   .|+|++|+.++...++++|++  ..++++++..+.||| ++..... +++++|+|+|++|
T Consensus        75 G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~  153 (324)
T cd08244          75 GPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAG  153 (324)
T ss_pred             CCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCc
Confidence            99999999999999987   899999999999999999985  456778888999995 5555555 9999999999999


Q ss_pred             hHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhcc
Q 018013          241 GTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAV  319 (362)
Q Consensus       241 ~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~  319 (362)
                      ++|++++++|+..|++|+++++++++.+.++++|+++++++.+.++.+.+... .++++|+++||+|+...+.+++++++
T Consensus       154 ~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~  233 (324)
T cd08244         154 GLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAP  233 (324)
T ss_pred             hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhcc
Confidence            99999999999999999999999999999999999999988877766665554 44689999999999888999999999


Q ss_pred             CCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       320 ~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +|+++.+|..+.....  +   +    ...++.+++++.++
T Consensus       234 ~g~~v~~g~~~~~~~~--~---~----~~~~~~~~~~~~~~  265 (324)
T cd08244         234 GGRFLTYGWASGEWTA--L---D----EDDARRRGVTVVGL  265 (324)
T ss_pred             CcEEEEEecCCCCCCc--c---C----HHHHhhCCcEEEEe
Confidence            9999999987542211  1   1    01345777777765

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.9e-31  Score=250.94  Aligned_cols=256  Identities=27%  Similarity=0.400  Sum_probs=214.5

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++.++   ...+.+++.+.| .+.++||+|++.++++|++|+.+..|.++.     ....|..+|+|++|+|+++
T Consensus         1 m~a~~~~~~~---~~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~V~~v   71 (341)
T cd08297           1 MKAAVVEEFG---EKPYEVKDVPVP-EPGPGEVLVKLEASGVCHTDLHAALGDWPV-----KPKLPLIGGHEGAGVVVAV   71 (341)
T ss_pred             CceEEeeccC---CCCceEEEeeCC-CCCCCeEEEEEEEeecchhHHHHHcCCCCc-----CCCCCccCCcccceEEEEe
Confidence            7899998665   235888999988 789999999999999999999988886642     1344667899999999999


Q ss_pred             CCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |++++.|++||+|+..                             ..|+|++|+.++.+.++++|++  ..++++++..+
T Consensus        72 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~  151 (341)
T cd08297          72 GPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAG  151 (341)
T ss_pred             CCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcch
Confidence            9999999999999874                             2689999999999999999985  45677789999


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-  294 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-  294 (362)
                      .|||+++.....+++++|||+|+++++|++++++|++.|++|+++++++++.+.++++|+++++++++.++.+.+.... 
T Consensus       152 ~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  231 (341)
T cd08297         152 VTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTG  231 (341)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhc
Confidence            9999999886449999999999888899999999999999999999999999999999999999988777666665554 


Q ss_pred             CCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          295 PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       295 ~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++++|++||+.+ +..+..++++++++|+|+.+|..+...    +. .+    ...++.+++++.|+
T Consensus       232 ~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~-~~----~~~~~~~~~~~~~~  289 (341)
T cd08297         232 GGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGF----IP-LD----PFDLVLRGITIVGS  289 (341)
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCC----CC-CC----HHHHHhcccEEEEe
Confidence            578999999665 688899999999999999999765321    11 11    12467888888774

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.8e-31  Score=252.65  Aligned_cols=261  Identities=30%  Similarity=0.425  Sum_probs=206.1

Q ss_pred             ceEEEEeccCCCccCceEEEe-ccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCC--------------CCCCCC
Q 018013           87 FEKLVVHTLNHNFRDATIKVR-APLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN--------------DIGSRL  151 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~-~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~--------------~~~~~~  151 (362)
                      ||+++++..+..  ..+.+.+ .+.| ++.+++|+|||.++++|++|+++..|.++...+              ......
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (350)
T cd08274           1 MRAVLLTGHGGL--DKLVYRDDVPVP-TPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSF   77 (350)
T ss_pred             CeEEEEeccCCc--cceeecccCCCC-CCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCC
Confidence            678887754422  2344443 4666 678999999999999999999988876532110              013456


Q ss_pred             CCCCCCceEEEEEEeCCCCCCCCCCCeEEEec--------------------CCCeeeEEEeeCCCeeeCCCC--CHHHH
Q 018013          152 PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------------------FGSYAEFTMVPSKHILPVARP--DPEVV  209 (362)
Q Consensus       152 p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a  209 (362)
                      |.++|||++|+|+++|+++++|++||+|++..                    .|+|++|+.++...++++|++  +.+++
T Consensus        78 p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a  157 (350)
T cd08274          78 PRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELA  157 (350)
T ss_pred             CcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHH
Confidence            88999999999999999999999999998831                    489999999999999999985  45677


Q ss_pred             HhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHH
Q 018013          210 AMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV  289 (362)
Q Consensus       210 ~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~  289 (362)
                      +++.++.+||+++.....++|++|+|+|++|++|++++++|+.+|++|+++++++ +.+.++++|++.+++.......+ 
T Consensus       158 ~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~-  235 (350)
T cd08274         158 TFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLAD-  235 (350)
T ss_pred             hcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHH-
Confidence            8889999999998544339999999999889999999999999999999998765 88888999998766665555544 


Q ss_pred             HHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          290 FKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       290 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+...++++|++||++|++.++.++++++++|+++.+|.......  .+   +    +..++.+++++.|+.
T Consensus       236 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~---~----~~~~~~~~~~~~~~~  298 (350)
T cd08274         236 AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVV--EL---D----LRTLYLKDLTLFGST  298 (350)
T ss_pred             HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccc--cC---C----HHHhhhcceEEEEee
Confidence            444556789999999999999999999999999999987532111  11   1    224578888888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-31  Score=251.45  Aligned_cols=250  Identities=22%  Similarity=0.315  Sum_probs=201.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++     .+.+++.+.| ++.++||+||+.++++|++|++...|.++.      .++|.++|||++|+|+++
T Consensus         1 m~a~~~~~~~-----~~~~~~~~~p-~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~------~~~p~i~G~e~~G~V~~v   68 (339)
T PRK10083          1 MKSIVIEKPN-----SLAIEERPIP-QPAAGEVRVKVKLAGICGSDSHIYRGHNPF------AKYPRVIGHEFFGVIDAV   68 (339)
T ss_pred             CeEEEEecCC-----eeEEEeccCC-CCCCCeEEEEEEEEEEcccchHHHcCCCCc------CCCCcccccceEEEEEEE
Confidence            6888888654     3788999998 789999999999999999999988886531      246889999999999999


Q ss_pred             CCCCCCCCCCCeEEE---------------------------ec-CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHH
Q 018013          167 GDSVNNVKVGTPAAI---------------------------MT-FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLT  217 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~---------------------------~~-~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~t  217 (362)
                      |++|+.|++||+|+.                           .. +|+|++|+.++...++++|++ ..+.+++..++.+
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~  148 (339)
T PRK10083         69 GEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTI  148 (339)
T ss_pred             CCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHH
Confidence            999999999999983                           22 589999999999999999986 4444556778888


Q ss_pred             HHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHH-CCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          218 ASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKL-AGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       218 A~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~-~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      +|.++.....++|++|+|+| +|++|++++|+|+. +|++ +++++++++|.+.++++|+++++++++.++.+.+.. .+
T Consensus       149 a~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~-~g  226 (339)
T PRK10083        149 AANVTGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE-KG  226 (339)
T ss_pred             HHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc-CC
Confidence            88655444339999999999 79999999999996 6995 777888899999999999999999887666665532 23


Q ss_pred             CceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          296 KGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       296 ~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .++|++||++| ...+..++++++++|+++.+|..+. ..  .+   +    ...+..|++++.|.
T Consensus       227 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~--~~---~----~~~~~~~~~~~~~~  282 (339)
T PRK10083        227 IKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PS--EI---V----QQGITGKELSIFSS  282 (339)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-Cc--ee---c----HHHHhhcceEEEEE
Confidence            44679999999 4688999999999999999998653 11  11   1    11234678887764

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=3.3e-31  Score=249.98  Aligned_cols=237  Identities=30%  Similarity=0.394  Sum_probs=208.1

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +|+++.++..+..  ..+++++.+.| .++++||+|++.++|+|++|+++..|.++.      ..+|.++|+|++|+|+.
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~------~~~~~~~g~e~~G~v~~   71 (327)
T PRK10754          1 MAKRIEFHKHGGP--EVLQAVEFTPA-DPAENEVQVENKAIGINYIDTYIRSGLYPP------PSLPSGLGTEAAGVVSK   71 (327)
T ss_pred             CceEEEEeccCCh--hHeEEeeccCC-CCCCCEEEEEEEEEEcCHHHhhhcCCCCCC------CCCCCccCcceEEEEEE
Confidence            5899999876643  46888899988 789999999999999999999988876532      23577899999999999


Q ss_pred             eCCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCc
Q 018013          166 VGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAG  240 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g  240 (362)
                      +|++++.+++||+|+.+.  .|+|++|+.++.+.++++|++  +.+++.++..+.+||+++..... ++|++|+|+|++|
T Consensus        72 vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g  151 (327)
T PRK10754         72 VGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAG  151 (327)
T ss_pred             eCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCc
Confidence            999999999999998763  489999999999999999985  45666778899999999988777 9999999999999


Q ss_pred             hHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhcc
Q 018013          241 GTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAV  319 (362)
Q Consensus       241 ~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~  319 (362)
                      ++|++++|+|+.+|++|+++++++++.+.++++|++++++....++.+.++.. .++++|++|||+++.....+++++++
T Consensus       152 ~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~  231 (327)
T PRK10754        152 GVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQR  231 (327)
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999988877776666655 45789999999999888999999999


Q ss_pred             CCEEEEEcCccc
Q 018013          320 YGRLIVIGMISQ  331 (362)
Q Consensus       320 ~G~~v~~G~~~~  331 (362)
                      +|+|+.+|..+.
T Consensus       232 ~g~~v~~g~~~~  243 (327)
T PRK10754        232 RGLMVSFGNASG  243 (327)
T ss_pred             CCEEEEEccCCC
Confidence            999999997653

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4e-31  Score=253.64  Aligned_cols=253  Identities=26%  Similarity=0.396  Sum_probs=212.7

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.    .+.+++.+.| .++++||+|++.++++|++|+....|.++       ..+|.++|+|++|+|+.+
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~~~-~~~~~~v~v~v~~~~l~~~d~~~~~~~~~-------~~~p~~~g~e~~G~v~~v   68 (367)
T cd08263           1 MKAAVLKGPNP----PLTIEEIPVP-RPKEGEILIRVAACGVCHSDLHVLKGELP-------FPPPFVLGHEISGEVVEV   68 (367)
T ss_pred             CeeEEEecCCC----CcEEEEeeCC-CCCCCeEEEEEEEeeeCcchHHHhcCCCC-------CCCCcccccccceEEEEe
Confidence            78999987753    2678888888 78999999999999999999998887653       245778999999999999


Q ss_pred             CCCCCC---CCCCCeEEEe--------------------------------------------------cCCCeeeEEEe
Q 018013          167 GDSVNN---VKVGTPAAIM--------------------------------------------------TFGSYAEFTMV  193 (362)
Q Consensus       167 G~~v~~---~~~Gd~V~~~--------------------------------------------------~~g~~~~~~~v  193 (362)
                      |+++++   |++||+|++.                                                  ..|+|++|+.+
T Consensus        69 G~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  148 (367)
T cd08263          69 GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVV  148 (367)
T ss_pred             CCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEe
Confidence            999988   9999999872                                                  35899999999


Q ss_pred             eCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHH
Q 018013          194 PSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQL  269 (362)
Q Consensus       194 ~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~  269 (362)
                      +.+.++++|++  +.++++++..++|||+++..... +++++|+|+| +|++|++++++|+..|++ |++++.++++.+.
T Consensus       149 ~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~  227 (367)
T cd08263         149 PATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAK  227 (367)
T ss_pred             chhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence            99999999985  56788899999999999988877 8999999995 799999999999999997 9999999999999


Q ss_pred             HHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHH
Q 018013          270 LKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLC  347 (362)
Q Consensus       270 l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~  347 (362)
                      ++++|++.+++++..++.+.+... .++++|++||++++. ..+.++++++++|+|+.+|..+.....    ..+    +
T Consensus       228 ~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~----~~~----~  299 (367)
T cd08263         228 AKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATA----EIP----I  299 (367)
T ss_pred             HHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcc----ccC----H
Confidence            999999999998877776655554 457899999999987 899999999999999999876532110    011    1


Q ss_pred             HHHHhcCeEEEEe
Q 018013          348 EKILAKSQTVVCI  360 (362)
Q Consensus       348 ~~~~~k~~~i~G~  360 (362)
                      ..++.+++++.|+
T Consensus       300 ~~~~~~~~~~~~~  312 (367)
T cd08263         300 TRLVRRGIKIIGS  312 (367)
T ss_pred             HHHhhCCeEEEec
Confidence            2345677777764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.6e-31  Score=251.63  Aligned_cols=232  Identities=25%  Similarity=0.333  Sum_probs=198.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++++++.     +.+++.+.| .+.++||+|||.++++|++|++...|.++.      ...|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-----~~l~~~~~p-~~~~~evlIkv~a~~i~~~d~~~~~g~~~~------~~~~~~~G~e~~G~V~~v   68 (351)
T cd08285           1 MKAFAMLGIGK-----VGWIEKPIP-VCGPNDAIVRPTAVAPCTSDVHTVWGGAPG------ERHGMILGHEAVGVVEEV   68 (351)
T ss_pred             CceEEEccCCc-----cEEEECCCC-CCCCCeEEEEEEEEEechhhHHHhcCCCCC------CCCCcccCcceEEEEEEe
Confidence            78899987652     577888888 789999999999999999999988776532      345788999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-------------------------------CCCeeeEEEeeCC--CeeeCCCC--CHHHHHh
Q 018013          167 GDSVNNVKVGTPAAIMT-------------------------------FGSYAEFTMVPSK--HILPVARP--DPEVVAM  211 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------------------------------~g~~~~~~~v~~~--~~~~ip~~--~~~~a~l  211 (362)
                      |+++++|++||+|++.+                               .|+|++|+.+|..  .++++|++  ..+++.+
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~  148 (351)
T cd08285          69 GSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVML  148 (351)
T ss_pred             cCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhh
Confidence            99999999999999742                               5899999999974  89999985  4566777


Q ss_pred             hhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHH
Q 018013          212 LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF  290 (362)
Q Consensus       212 ~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~  290 (362)
                      +.++.|||+++.....++|++|||+| +|++|++++|+|+.+|+ .|+++++++++.+.++++|+++++++.+.++.+.+
T Consensus       149 ~~~~~ta~~~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i  227 (351)
T cd08285         149 PDMMSTGFHGAELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQI  227 (351)
T ss_pred             ccchhhHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHH
Confidence            88999999997544449999999996 79999999999999999 58999999999999999999999998877766655


Q ss_pred             HHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCccc
Q 018013          291 KEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       291 ~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ... .++++|++|||+|+ +.+..++++++++|+++.+|..+.
T Consensus       228 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  270 (351)
T cd08285         228 LKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE  270 (351)
T ss_pred             HHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence            554 45689999999996 688999999999999999998764

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=6e-31  Score=247.68  Aligned_cols=252  Identities=23%  Similarity=0.308  Sum_probs=205.5

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG  167 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG  167 (362)
                      ||++++..+.+  +.+++++.|.| .+.++||+|++.++++|++|++...|.+..     ....|..+|+|++|+|+.  
T Consensus         1 ~a~~~~~~~~~--~~~~~~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~V~~--   70 (323)
T TIGR02823         1 KALVVEKEDGK--VSAQVETLDLS-DLPEGDVLIKVAYSSLNYKDALAITGKGGV-----VRSYPMIPGIDAAGTVVS--   70 (323)
T ss_pred             CeEEEccCCCC--cceeEeecCCC-CCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-----CCCCCccceeeeEEEEEe--
Confidence            57788776643  46899999999 799999999999999999999988886531     134577899999999988  


Q ss_pred             CCCCCCCCCCeEEEec-------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhC---CCCCC-EEE
Q 018013          168 DSVNNVKVGTPAAIMT-------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAG---PASGK-KVL  234 (362)
Q Consensus       168 ~~v~~~~~Gd~V~~~~-------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~---~~~g~-~Vl  234 (362)
                      +++..|++||+|++..       .|++++|+.+|.+.++++|++  +.+++.++..+.+||+++....   .++|+ +|+
T Consensus        71 ~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vl  150 (323)
T TIGR02823        71 SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVL  150 (323)
T ss_pred             cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEE
Confidence            5677899999999875       689999999999999999985  4567778888999988875443   37888 999


Q ss_pred             EEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHH
Q 018013          235 VTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCL  314 (362)
Q Consensus       235 I~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~  314 (362)
                      |+|++|++|++++++|+.+|++|+++++++++.+.++++|++++++..+.+.  .++...+.++|+++||+|++.+..++
T Consensus       151 I~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~d~vld~~g~~~~~~~~  228 (323)
T TIGR02823       151 VTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP--PGKPLEKERWAGAVDTVGGHTLANVL  228 (323)
T ss_pred             EEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH--HHHHhcCCCceEEEECccHHHHHHHH
Confidence            9999999999999999999999999999999999999999998888755332  33334444699999999998899999


Q ss_pred             HHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          315 KALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       315 ~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++++++|+|+.+|..+.....  .   ++    ..++.+++++.|+
T Consensus       229 ~~l~~~G~~v~~g~~~~~~~~--~---~~----~~~~~~~~~~~~~  265 (323)
T TIGR02823       229 AQLKYGGAVAACGLAGGPDLP--T---TV----LPFILRGVSLLGI  265 (323)
T ss_pred             HHhCCCCEEEEEcccCCCCcc--c---cH----HHHhhcceEEEEE
Confidence            999999999999987432211  1   11    1245788888875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.9e-31  Score=249.31  Aligned_cols=256  Identities=23%  Similarity=0.311  Sum_probs=213.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+|+++.++..    +.+.+.+.| .+.+++|+|++.++++|++|+....|.++.      ...|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~~~~----~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~------~~~~~~~g~e~~G~V~~~   69 (345)
T cd08260           1 MRAAVYEEFGEP----LEIREVPDP-EPPPDGVVVEVEACGVCRSDWHGWQGHDPD------VTLPHVPGHEFAGVVVEV   69 (345)
T ss_pred             CeeEEEecCCCC----cEEEEccCC-CCCCCeEEEEEEEeeccHHHHHHhcCCCCC------CCCCeeeccceeEEEEEE
Confidence            789999876643    778888888 789999999999999999999998886531      345778999999999999


Q ss_pred             CCCCCCCCCCCeEEE---------------------------e-cCCCeeeEEEeeCC--CeeeCCCC--CHHHHHhhhh
Q 018013          167 GDSVNNVKVGTPAAI---------------------------M-TFGSYAEFTMVPSK--HILPVARP--DPEVVAMLTS  214 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~---------------------------~-~~g~~~~~~~v~~~--~~~~ip~~--~~~~a~l~~~  214 (362)
                      |++++.|++||+|++                           + ..|+|++|++++..  .++++|++  ..+++.++.+
T Consensus        70 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~  149 (345)
T cd08260          70 GEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCR  149 (345)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccc
Confidence            999999999999986                           2 26899999999985  89999985  4566778889


Q ss_pred             HHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHH
Q 018013          215 GLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKE  292 (362)
Q Consensus       215 ~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~  292 (362)
                      +.+||+++..... +++++|+|+| +|++|++++|+|+..|++|+++++++++.+.++++|++++++++. .++.+.+..
T Consensus       150 ~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~  228 (345)
T cd08260         150 FATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRD  228 (345)
T ss_pred             hHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHH
Confidence            9999999977666 8999999999 799999999999999999999999999999999999999999887 666665555


Q ss_pred             HCCCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          293 EFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       293 ~~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ..++++|++|||+| ...+..++++++++|+++.+|..........+   +    +..++.+++++.|+.
T Consensus       229 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~---~----~~~~~~~~~~~~~~~  291 (345)
T cd08260         229 LTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVAL---P----MDRVVARELEIVGSH  291 (345)
T ss_pred             HhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCcccc---C----HHHHhhcccEEEeCC
Confidence            54448999999998 47888999999999999999987654321111   1    223567888888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=3.6e-31  Score=252.19  Aligned_cols=259  Identities=27%  Similarity=0.356  Sum_probs=212.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCC------CCCCCCCCCCCCceE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN------DIGSRLPFDAGFEAV  160 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~------~~~~~~p~~~G~e~~  160 (362)
                      ||++++...+..    +++++.|.| ++.++||+|++.++++|++|++...|.++....      ......|.++|+|++
T Consensus         1 ~~a~~~~~~~~~----~~~~~~~~p-~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~   75 (350)
T cd08240           1 MKAAAVVEPGKP----LEEVEIDTP-KPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIV   75 (350)
T ss_pred             CeeEEeccCCCC----ceEEecCCC-CCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCccccccee
Confidence            788888766543    678889998 799999999999999999999988875431000      002234678999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHH
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVA  210 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~  210 (362)
                      |+|+++|++++++++||+|+++                            ..|++++|+.++.+.++++|++  ..++++
T Consensus        76 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~  155 (350)
T cd08240          76 GEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAAT  155 (350)
T ss_pred             EEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeeh
Confidence            9999999999999999999986                            4689999999999999999985  456677


Q ss_pred             hhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHH
Q 018013          211 MLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKT  288 (362)
Q Consensus       211 l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~  288 (362)
                      ++..+.+||+++..... +++++|+|+| +|++|++++|+|+..|+ +|+++++++++.+.++++|++.++++.+.++.+
T Consensus       156 l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  234 (350)
T cd08240         156 LACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK  234 (350)
T ss_pred             hhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHH
Confidence            88899999999988877 6899999996 79999999999999999 799999999999999999999988887766655


Q ss_pred             HHHHHCCCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          289 VFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+....++++|++||++| ...+..++++|+++|+|+.+|..+....      .+++    .+..+++++.|+.
T Consensus       235 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~------~~~~----~~~~~~~~i~~~~  298 (350)
T cd08240         235 RIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEAT------LPLP----LLPLRALTIQGSY  298 (350)
T ss_pred             HHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCc------ccHH----HHhhcCcEEEEcc
Confidence            555554448999999998 4788999999999999999988654321      1111    2455888888754

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=4.4e-31  Score=248.26  Aligned_cols=245  Identities=29%  Similarity=0.404  Sum_probs=207.4

Q ss_pred             CceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEE
Q 018013          101 DATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA  180 (362)
Q Consensus       101 ~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  180 (362)
                      +.+.+++.+.| ++.+++|+|++.++++|+.|+....|.+..     ....|.++|+|++|+|+++|++++.+++||+|+
T Consensus        12 ~~~~~~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-----~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~   85 (323)
T cd05282          12 LVLELVSLPIP-PPGPGEVLVRMLAAPINPSDLITISGAYGS-----RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVL   85 (323)
T ss_pred             ceEEeEeCCCC-CCCCCeEEEEEEeccCCHHHHHHhcCcCCC-----CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEE
Confidence            35777788888 789999999999999999999988776532     123577899999999999999999999999999


Q ss_pred             Eec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE
Q 018013          181 IMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT  256 (362)
Q Consensus       181 ~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~  256 (362)
                      ++. .|+|++|+.++...++++|++  ..+++.++..+.+||+++..... ++|++|+|+|++|++|++++++|+.+|++
T Consensus        86 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~  165 (323)
T cd05282          86 PLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFK  165 (323)
T ss_pred             EeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCe
Confidence            988 899999999999999999985  45677788899999999988877 89999999999999999999999999999


Q ss_pred             EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          257 VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       257 Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      |+++++++++.+.++++|+++++++...++...+... .++++|++|||+|+......+++++++|+|+.+|..+.....
T Consensus       166 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~  245 (323)
T cd05282         166 TINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVP  245 (323)
T ss_pred             EEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCC
Confidence            9999999999999999999999998876666655554 457899999999998888999999999999999987653111


Q ss_pred             CCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          336 HGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       336 ~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                        +.       ...+..++.++.++
T Consensus       246 --~~-------~~~~~~~~~~~~~~  261 (323)
T cd05282         246 --FP-------RSVFIFKDITVRGF  261 (323)
T ss_pred             --CC-------HHHHhhcCceEEEE
Confidence              11       11233477777775

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-30  Score=244.67  Aligned_cols=255  Identities=28%  Similarity=0.385  Sum_probs=209.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++.+..+.   ..+.+++++.| ++.++||+|++.++++|++|++...|.+.      ....|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~p-~~~~~~v~V~v~~~~l~~~d~~~~~g~~~------~~~~p~~~G~e~~G~V~~v   70 (306)
T cd08258           1 MKALVKTGPGP---GNVELREVPEP-EPGPGEVLIKVAAAGICGSDLHIYKGDYD------PVETPVVLGHEFSGTIVEV   70 (306)
T ss_pred             CeeEEEecCCC---CceEEeecCCC-CCCCCeEEEEEEEEEechhhHHHHcCCCC------cCCCCeeeccceEEEEEEE
Confidence            57888776432   34889999999 79999999999999999999998887652      1234678999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~  216 (362)
                      |++++.|++||+|++..                             .|+|++|++++...++++|++ ..+.++++..+.
T Consensus        71 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~  150 (306)
T cd08258          71 GPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLA  150 (306)
T ss_pred             CCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHH
Confidence            99999999999999864                             489999999999999999986 444555888999


Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec--CCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC--GGEHKAQLLKELGVDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~--~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~  293 (362)
                      +||+++..... +++++|+|.| +|++|++++|+|+..|++|++++  +++++.+.++++|++++ ++...++.+.+...
T Consensus       151 ~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~  228 (306)
T cd08258         151 VAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEI  228 (306)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHH
Confidence            99999988777 8999999976 79999999999999999998874  34557788889999888 88777777666554


Q ss_pred             C-CCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEecC
Q 018013          294 F-PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG  362 (362)
Q Consensus       294 ~-~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~g  362 (362)
                      . ++++|++|||+| +..+...+++|+++|+++.+|..+.....  +   +    ...++.|+++|+|+..
T Consensus       229 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~---~----~~~~~~~~~~i~g~~~  290 (306)
T cd08258         229 TDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAAS--I---D----VERIIQKELSVIGSRS  290 (306)
T ss_pred             cCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcc--c---C----HHHHhhcCcEEEEEec
Confidence            4 468999999997 47888999999999999999998732221  1   1    1246689999999863

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=5.7e-31  Score=250.25  Aligned_cols=231  Identities=24%  Similarity=0.314  Sum_probs=199.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCC-CCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPI-KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      ||++++++++.     +.+.+.+.| .+ .++||+||+.++++|++|++...|.++.      .++|.++|+|++|+|++
T Consensus         1 ~ka~~~~~~~~-----~~~~~~~~p-~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~------~~~~~~~g~e~~G~V~~   68 (347)
T cd05278           1 MKALVYLGPGK-----IGLEEVPDP-KIQGPHDAIVRVTATSICGSDLHIYRGGVPG------AKHGMILGHEFVGEVVE   68 (347)
T ss_pred             CceEEEecCCc-----eEEEEcCCC-CCCCCCeEEEEEEEEEechhhHHHHcCCCCC------CCCCceeccceEEEEEE
Confidence            67888876542     678888888 67 8999999999999999999998887642      34577899999999999


Q ss_pred             eCCCCCCCCCCCeEEE-------------------------------ecCCCeeeEEEeeCC--CeeeCCCC--CHHHHH
Q 018013          166 VGDSVNNVKVGTPAAI-------------------------------MTFGSYAEFTMVPSK--HILPVARP--DPEVVA  210 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~-------------------------------~~~g~~~~~~~v~~~--~~~~ip~~--~~~~a~  210 (362)
                      +|+++++|++||+|++                               ...|+|++|++++.+  .++++|++  ..++++
T Consensus        69 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~  148 (347)
T cd05278          69 VGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALM  148 (347)
T ss_pred             ECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhh
Confidence            9999999999999997                               335899999999997  89999985  456778


Q ss_pred             hhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHH
Q 018013          211 MLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKT  288 (362)
Q Consensus       211 l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~  288 (362)
                      ++..+.|||+++ .... +++++|+|+| +|++|++++|+|+.+|+ +|+++.+++++.+.++++|++.++++...++.+
T Consensus       149 l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  226 (347)
T cd05278         149 LSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVE  226 (347)
T ss_pred             hcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHH
Confidence            888999999998 4455 8999999976 69999999999999997 899998888899999999999999988777766


Q ss_pred             HHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCccc
Q 018013          289 VFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       289 ~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .+... .++++|++||++++ +.+..++++|+++|+++.+|....
T Consensus       227 ~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  271 (347)
T cd05278         227 QILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGK  271 (347)
T ss_pred             HHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence            66654 44789999999997 789999999999999999996554

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=7.6e-31  Score=251.51  Aligned_cols=230  Identities=23%  Similarity=0.314  Sum_probs=198.4

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG  167 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG  167 (362)
                      |++++...+..    +.+++.+.| .+.++||+|++.++++|++|++...|.++       ...|.++|||++|+|+++|
T Consensus         2 ~a~~~~~~~~~----~~~~~~~~p-~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-------~~~~~i~g~e~~G~V~~vG   69 (365)
T cd05279           2 KAAVLWEKGKP----LSIEEIEVA-PPKAGEVRIKVVATGVCHTDLHVIDGKLP-------TPLPVILGHEGAGIVESIG   69 (365)
T ss_pred             ceeEEecCCCC----cEEEEeecC-CCCCCeEEEEEEEeeecchhHHHhcCCCC-------CCCCcccccceeEEEEEeC
Confidence            56777765543    778888988 88999999999999999999998887652       3456789999999999999


Q ss_pred             CCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEeeCCCe
Q 018013          168 DSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMVPSKHI  198 (362)
Q Consensus       168 ~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v~~~~~  198 (362)
                      ++++.+++||+|++..                                                 .|+|++|+.++.+.+
T Consensus        70 ~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  149 (365)
T cd05279          70 PGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISL  149 (365)
T ss_pred             CCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCce
Confidence            9999999999998752                                                 368999999999999


Q ss_pred             eeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcC
Q 018013          199 LPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELG  274 (362)
Q Consensus       199 ~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g  274 (362)
                      +++|++  +.+++.+..++.+||+++..... ++|++|||+| +|++|++++++|+.+|++ |+++++++++.+.++++|
T Consensus       150 ~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g  228 (365)
T cd05279         150 AKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLG  228 (365)
T ss_pred             EECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence            999985  45666777899999999887777 9999999996 799999999999999995 778888899999999999


Q ss_pred             CcEEEeCCCc--cHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhc-cCCEEEEEcCcc
Q 018013          275 VDRVINYKAE--DIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALA-VYGRLIVIGMIS  330 (362)
Q Consensus       275 ~~~v~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~-~~G~~v~~G~~~  330 (362)
                      +++++++.+.  ++.+.+....++++|++||++|. ..+..++++++ ++|+++.+|...
T Consensus       229 ~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  288 (365)
T cd05279         229 ATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPP  288 (365)
T ss_pred             CCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCC
Confidence            9999988766  66666665556789999999984 78899999999 999999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=9.8e-31  Score=252.55  Aligned_cols=252  Identities=22%  Similarity=0.256  Sum_probs=205.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++.+.     .+++++.+.|.+..+++|+||+.++++|++|++...|.++.      .++|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~~-----~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~------~~~p~~~G~e~~G~V~~v   69 (386)
T cd08283           1 MKALVWHGKG-----DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG------MKKGDILGHEFMGVVEEV   69 (386)
T ss_pred             CeeEEEecCC-----CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC------CCCCccccccceEEEEEe
Confidence            7888887542     37888999883335999999999999999999999887642      345788999999999999


Q ss_pred             CCCCCCCCCCCeEEEec------------------------------------------------CCCeeeEEEeeCC--
Q 018013          167 GDSVNNVKVGTPAAIMT------------------------------------------------FGSYAEFTMVPSK--  196 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~------------------------------------------------~g~~~~~~~v~~~--  196 (362)
                      |++++++++||+|++..                                                .|+|++|++++.+  
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~  149 (386)
T cd08283          70 GPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADV  149 (386)
T ss_pred             CCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccC
Confidence            99999999999998742                                                4899999999988  


Q ss_pred             CeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH
Q 018013          197 HILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE  272 (362)
Q Consensus       197 ~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~  272 (362)
                      .++++|++  +.++++++..+++||+++ .... ++|++|+|+| +|++|++++++|+..|+ +|+++++++++.+.+++
T Consensus       150 ~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~  227 (386)
T cd08283         150 GPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARS  227 (386)
T ss_pred             eEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence            89999985  456777889999999999 5555 8999999996 79999999999999998 69999999999999998


Q ss_pred             cCCcEEEeCCCc-cHHHHHHHHC-CCceeEEEECCCh----------------------HHHHHHHHHhccCCEEEEEcC
Q 018013          273 LGVDRVINYKAE-DIKTVFKEEF-PKGFDIIYESVGG----------------------DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       273 ~g~~~v~~~~~~-~~~~~~~~~~-~~g~Dvvid~~g~----------------------~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ++...++++... ++.+.+.... ++++|++|||+|+                      ..+..++++++++|+++.+|.
T Consensus       228 ~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~  307 (386)
T cd08283         228 HLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGV  307 (386)
T ss_pred             cCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcC
Confidence            844467777765 3666665544 4589999999975                      367889999999999999997


Q ss_pred             cccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          329 ISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .+.....     .+    ...++.|++++.+.
T Consensus       308 ~~~~~~~-----~~----~~~~~~~~~~i~~~  330 (386)
T cd08283         308 YGGTVNK-----FP----IGAAMNKGLTLRMG  330 (386)
T ss_pred             CCCCcCc-----cC----HHHHHhCCcEEEec
Confidence            6542111     11    12356888888774

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=8e-31  Score=254.19  Aligned_cols=248  Identities=29%  Similarity=0.381  Sum_probs=202.4

Q ss_pred             CCccceEEEEec--cCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCC----CCCCCCCC-CCC
Q 018013           83 LPESFEKLVVHT--LNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG----NDIGSRLP-FDA  155 (362)
Q Consensus        83 ~p~~~~a~~~~~--~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~----~~~~~~~p-~~~  155 (362)
                      +|.+||||++..  .+ ++.+.+.+.+.+.| .+.++||+|++.++++|.+|++...+......    .......| .++
T Consensus         4 ~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~p-~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~   81 (398)
T TIGR01751         4 VPETMYAFAIREERDG-DPRQAIQLEVVPVP-ELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII   81 (398)
T ss_pred             cchhhhheEEecccCC-CcccceEEeecCCC-CCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence            578899999965  44 33456889999999 79999999999999999999887765421100    00011223 269


Q ss_pred             CCceEEEEEEeCCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC--
Q 018013          156 GFEAVGLIAAVGDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP--  204 (362)
Q Consensus       156 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~--  204 (362)
                      |||++|+|+++|++++.|++||+|++..                             .|+|++|++++.+.++++|++  
T Consensus        82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~  161 (398)
T TIGR01751        82 GSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLT  161 (398)
T ss_pred             ccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCC
Confidence            9999999999999999999999998853                             489999999999999999985  


Q ss_pred             CHHHHHhhhhHHHHHHHHHH--hCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeC
Q 018013          205 DPEVVAMLTSGLTASIALEQ--AGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY  281 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~--~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~  281 (362)
                      ..+++.++..+.+||+++..  ... ++|++|+|+|++|++|++++|+|+.+|++++++++++++.+.++++|+++++|+
T Consensus       162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~  241 (398)
T TIGR01751       162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDR  241 (398)
T ss_pred             HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecC
Confidence            45666778899999999875  344 899999999998999999999999999999999999999999999999999987


Q ss_pred             CCcc----------------------HHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccc
Q 018013          282 KAED----------------------IKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       282 ~~~~----------------------~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      .+.+                      +.+.+.+. .++++|++|||+|+..+..++++++++|+++.+|..+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  315 (398)
T TIGR01751       242 NDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGY  315 (398)
T ss_pred             CCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCC
Confidence            5421                      22333333 346899999999998899999999999999999987653

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.1e-30  Score=244.70  Aligned_cols=232  Identities=28%  Similarity=0.386  Sum_probs=198.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+..  ..+.+.+.+.| .+.++||+|++.++++|+.|++...|.++      ....|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~------~~~~~~~~g~e~~G~v~~v   71 (320)
T cd08243           1 MKAIVIEQPGGP--EVLKLREIPIP-EPKPGWVLIRVKAFGLNRSEIFTRQGHSP------SVKFPRVLGIEAVGEVEEA   71 (320)
T ss_pred             CeEEEEcCCCCc--cceEEeecCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCC------CCCCCccccceeEEEEEEe
Confidence            577788654421  34666777777 78999999999999999999998877543      1234678999999999999


Q ss_pred             CCCCCCCCCCCeEEEecC-------CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEE
Q 018013          167 GDSVNNVKVGTPAAIMTF-------GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVT  236 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~~-------g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~  236 (362)
                      |.  ..+++||+|+++..       |+|++|+.++...++++|++  ..++++++.++.+||+++..... ++|++|+|+
T Consensus        72 G~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~  149 (320)
T cd08243          72 PG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIR  149 (320)
T ss_pred             cC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            95  57999999998854       89999999999999999985  45678899999999999988877 899999999


Q ss_pred             cCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHH
Q 018013          237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKA  316 (362)
Q Consensus       237 ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  316 (362)
                      |++|++|++++|+|+..|++|+++++++++.+.++++|++++++. ..++.+.+... ++++|+++||+|+..+..++++
T Consensus       150 ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~  227 (320)
T cd08243         150 GGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRH  227 (320)
T ss_pred             cCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHh-CCCceEEEECCChHHHHHHHHH
Confidence            999999999999999999999999999999999999999888765 44555555555 7789999999999999999999


Q ss_pred             hccCCEEEEEcCccc
Q 018013          317 LAVYGRLIVIGMISQ  331 (362)
Q Consensus       317 l~~~G~~v~~G~~~~  331 (362)
                      ++++|+|+.+|....
T Consensus       228 l~~~g~~v~~g~~~~  242 (320)
T cd08243         228 LRPGGIVCMTGLLGG  242 (320)
T ss_pred             hccCCEEEEEccCCC
Confidence            999999999998644

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.2e-30  Score=250.04  Aligned_cols=232  Identities=25%  Similarity=0.379  Sum_probs=202.5

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+.    .+.+++.+.| .+.+++|+|++.++++|+.|+....|.++       ..+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~~p-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~g~e~~G~V~~v   68 (363)
T cd08279           1 MRAAVLHEVGK----PLEIEEVELD-DPGPGEVLVRIAAAGLCHSDLHVVTGDLP-------APLPAVLGHEGAGVVEEV   68 (363)
T ss_pred             CeEEEEecCCC----CceEEEeeCC-CCCCCeEEEEEEEeecCcHHHHHhcCCCC-------CCCCccccccceEEEEEe
Confidence            78999987653    3778888888 78999999999999999999998887653       345678999999999999


Q ss_pred             CCCCCCCCCCCeEEEe------------------------------------------------cCCCeeeEEEeeCCCe
Q 018013          167 GDSVNNVKVGTPAAIM------------------------------------------------TFGSYAEFTMVPSKHI  198 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~------------------------------------------------~~g~~~~~~~v~~~~~  198 (362)
                      |++++.|++||+|++.                                                ..|+|++|+.++.+.+
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  148 (363)
T cd08279          69 GPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASV  148 (363)
T ss_pred             CCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccE
Confidence            9999999999999983                                                3589999999999999


Q ss_pred             eeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcC
Q 018013          199 LPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELG  274 (362)
Q Consensus       199 ~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g  274 (362)
                      +++|++  +.+++.++..+.+||+++..... +++++|+|+| +|++|++++++|+..|++ |+++++++++.+.++++|
T Consensus       149 ~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g  227 (363)
T cd08279         149 VKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFG  227 (363)
T ss_pred             EECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhC
Confidence            999985  45677788899999999887777 9999999995 799999999999999995 999999999999999999


Q ss_pred             CcEEEeCCCccHHHHHHHHC-CCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCccc
Q 018013          275 VDRVINYKAEDIKTVFKEEF-PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       275 ~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ++++++++..++...+.... ++++|+++|+++ +..+..++++++++|+|+.+|....
T Consensus       228 ~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (363)
T cd08279         228 ATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP  286 (363)
T ss_pred             CeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC
Confidence            99999988777766665554 578999999999 5788999999999999999987653

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-30  Score=247.13  Aligned_cols=235  Identities=21%  Similarity=0.269  Sum_probs=192.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCC-----CCCCCCCCCCCCCceEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG-----NDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~-----~~~~~~~p~~~G~e~~G  161 (362)
                      ||++++..+      .+.+++.+.| +++++||+|++.++++|+.|++...|....+.     .......|.++|+|++|
T Consensus         1 m~a~~~~~~------~~~~~~~~~p-~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G   73 (341)
T cd08262           1 MRAAVFRDG------PLVVRDVPDP-EPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCG   73 (341)
T ss_pred             CceEEEeCC------ceEEEecCCC-CCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeE
Confidence            678888754      3788899998 79999999999999999999998887322100     00122357789999999


Q ss_pred             EEEEeCCCCCC-CCCCCeEEEe------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHHH
Q 018013          162 LIAAVGDSVNN-VKVGTPAAIM------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIA  221 (362)
Q Consensus       162 ~V~~vG~~v~~-~~~Gd~V~~~------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~a  221 (362)
                      +|+++|+++++ |++||+|+++                  ..|+|++|+++|.+.++++|++ ..+.++++.++++||++
T Consensus        74 ~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~~a~~~  153 (341)
T cd08262          74 EVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLHA  153 (341)
T ss_pred             EEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHHHHHHH
Confidence            99999999997 9999999987                  4699999999999999999986 44455577888999999


Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccH----HHHHHHHCC
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDI----KTVFKEEFP  295 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~----~~~~~~~~~  295 (362)
                      + .... ++|++|+|+| +|++|++++|+|+.+|++ ++++++++++.+.++++|+++++++...+.    ....+...+
T Consensus       154 ~-~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~  231 (341)
T cd08262         154 V-RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGG  231 (341)
T ss_pred             H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCC
Confidence            6 4444 9999999997 699999999999999996 677777889999999999999998876532    222333455


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcc
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +++|++||++|+ ..+..++++++++|+++.+|...
T Consensus       232 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~  267 (341)
T cd08262         232 PKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCM  267 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCC
Confidence            789999999997 57889999999999999999774

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.6e-30  Score=245.38  Aligned_cols=235  Identities=22%  Similarity=0.284  Sum_probs=194.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCC---CCCCCCCCCCCCceEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN---DIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~---~~~~~~p~~~G~e~~G~V  163 (362)
                      ||+++++.++     .+.+++.+.| ++.++||+|++.++++|+.|++...|.+..+..   ....+.|.++|+|++|+|
T Consensus         1 mka~~~~~~~-----~~~~~~~~~p-~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v   74 (350)
T cd08256           1 MRAVVCHGPQ-----DYRLEEVPVP-RPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRV   74 (350)
T ss_pred             CeeEEEecCC-----ceEEEECCCC-CCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEE
Confidence            6889987554     2788999999 799999999999999999999988886422110   001246778999999999


Q ss_pred             EEeCCCCC--CCCCCCeEEE---------------------------e---cCCCeeeEEEeeCC-CeeeCCCC--CHHH
Q 018013          164 AAVGDSVN--NVKVGTPAAI---------------------------M---TFGSYAEFTMVPSK-HILPVARP--DPEV  208 (362)
Q Consensus       164 ~~vG~~v~--~~~~Gd~V~~---------------------------~---~~g~~~~~~~v~~~-~~~~ip~~--~~~~  208 (362)
                      +++|++|+  +|++||+|++                           +   ..|+|++|+.++++ .++++|++  +.++
T Consensus        75 ~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~a  154 (350)
T cd08256          75 VELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDA  154 (350)
T ss_pred             EEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHH
Confidence            99999999  9999999987                           3   46899999999988 57899985  3445


Q ss_pred             HHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccH
Q 018013          209 VAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDI  286 (362)
Q Consensus       209 a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~  286 (362)
                      +.+ .++.++|+++ .... ++|++|+| +++|++|++++++|+.+|+ .++++++++++.+.++++|+++++++...++
T Consensus       155 a~~-~~~~ta~~a~-~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  231 (350)
T cd08256         155 ILI-EPLACALHAV-DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDV  231 (350)
T ss_pred             hhh-hHHHHHHHHH-HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCH
Confidence            555 8899999998 4445 99999999 5579999999999999998 5778888899998889999999998887666


Q ss_pred             HHHHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcc
Q 018013          287 KTVFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       287 ~~~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .+.+... .+.++|++||++|+ ..+..++++++++|+++.+|...
T Consensus       232 ~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  277 (350)
T cd08256         232 VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFG  277 (350)
T ss_pred             HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCC
Confidence            6655554 45689999999995 67889999999999999998654

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.2e-30  Score=244.91  Aligned_cols=252  Identities=27%  Similarity=0.363  Sum_probs=205.2

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |+|++++..+     .+.+++.+.| +++++||+|++.++++|+.|+....|.+.       ...|.++|+|++|+|+++
T Consensus         1 ~~a~~~~~~~-----~l~~~~~~~~-~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-------~~~~~~~g~~~~G~V~~~   67 (343)
T cd08236           1 MKALVLTGPG-----DLRYEDIPKP-EPGPGEVLVKVKACGICGSDIPRYLGTGA-------YHPPLVLGHEFSGTVEEV   67 (343)
T ss_pred             CeeEEEecCC-----ceeEEecCCC-CCCCCeEEEEEEEEEECccchHhhcCCCC-------CCCCcccCcceEEEEEEE
Confidence            6889998753     3788888998 79999999999999999999988877542       234668999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |++++.|++||+|+++                            ..|+|++|+.+|++.++++|++  +.+++.+ ..++
T Consensus        68 g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~  146 (343)
T cd08236          68 GSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAA  146 (343)
T ss_pred             CCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHH
Confidence            9999999999999987                            4699999999999999999985  3444444 6788


Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHH-HC
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE-EF  294 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~-~~  294 (362)
                      +||+++.....+++++|+|+| +|.+|++++|+|+.+|++ |+++++++++.+.++++|++.+++++... .+.+.. ..
T Consensus       147 ta~~~l~~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~  224 (343)
T cd08236         147 VALHAVRLAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTE  224 (343)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhC
Confidence            999999744339999999996 699999999999999996 99999999999999999999999887655 444443 44


Q ss_pred             CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          295 PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++|++|||.|+ ..+..++++|+++|+++.+|.......   +....    ...++.++.++.|+.
T Consensus       225 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~----~~~~~~~~~~~~~~~  285 (343)
T cd08236         225 GRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT---LSEEA----FEKILRKELTIQGSW  285 (343)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcc---cccCC----HHHHHhcCcEEEEEe
Confidence            5679999999975 678999999999999999997653211   11111    124567888887763

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.6e-30  Score=241.79  Aligned_cols=257  Identities=30%  Similarity=0.390  Sum_probs=216.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+.  .+.+++++.+.| .++++||+|++.++++|++|++...|.++.     ....|.++|+|++|+|+++
T Consensus         1 ~~a~~~~~~~~--~~~~~~~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~v~~~   72 (336)
T cd08276           1 MKAWRLSGGGG--LDNLKLVEEPVP-EPGPGEVLVRVHAVSLNYRDLLILNGRYPP-----PVKDPLIPLSDGAGEVVAV   72 (336)
T ss_pred             CeEEEEeccCC--CcceEEEeccCC-CCCCCeEEEEEEEEecCHHHHHHhcCCCCC-----CCCCCcccccceeEEEEEe
Confidence            78999986632  234777788887 689999999999999999999988876542     2236778999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHH
Q 018013          167 GDSVNNVKVGTPAAIMT----------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIAL  222 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al  222 (362)
                      |+++.+|++||+|++..                      .|+|++|+.++.+.++++|++  ..+++.++..+.+||+++
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l  152 (336)
T cd08276          73 GEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNAL  152 (336)
T ss_pred             CCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHH
Confidence            99999999999999875                      688999999999999999985  456677888999999999


Q ss_pred             HHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHC-CCcee
Q 018013          223 EQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEF-PKGFD  299 (362)
Q Consensus       223 ~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~-~~g~D  299 (362)
                      ..... ++|++|+|+| +|++|++++++|+..|++|++++.++++.+.++++|++++++... .++...+.... ++++|
T Consensus       153 ~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d  231 (336)
T cd08276         153 FGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVD  231 (336)
T ss_pred             HhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCc
Confidence            88777 9999999995 899999999999999999999999999999999899999998876 66666666554 46899


Q ss_pred             EEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          300 IIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       300 vvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++|++++..+..++++++++|+++.+|..+.....         .....++.|++++.|+.
T Consensus       232 ~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~  284 (336)
T cd08276         232 HVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAP---------VLLLPLLTKGATLRGIA  284 (336)
T ss_pred             EEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccC---------cCHHHHhhcceEEEEEe
Confidence            999999998899999999999999999987664321         11124678899988864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.5e-30  Score=245.85  Aligned_cols=252  Identities=23%  Similarity=0.294  Sum_probs=206.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++..+.     +.+++.+.|.++.++||+|++.++++|+.|+....|.++.      ..+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~~~-----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~------~~~~~~~g~e~~G~V~~~   69 (345)
T cd08286           1 MKALVYHGPGK-----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT------VTPGRILGHEGVGVVEEV   69 (345)
T ss_pred             CceEEEecCCc-----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC------CCCCceecccceEEEEEe
Confidence            68888876552     7888899884358999999999999999999998887542      234778999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCC--CeeeCCCC--CHHHHHhhh
Q 018013          167 GDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSK--HILPVARP--DPEVVAMLT  213 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~--~~~~ip~~--~~~~a~l~~  213 (362)
                      |++++.+++||+|++..                             .|+|++|+.++..  .++++|++  ..+++.++.
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~  149 (345)
T cd08286          70 GSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSD  149 (345)
T ss_pred             ccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccc
Confidence            99999999999998743                             2889999999988  89999985  456667888


Q ss_pred             hHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHH
Q 018013          214 SGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFK  291 (362)
Q Consensus       214 ~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~  291 (362)
                      .+++||+++..... +++++|+|+| +|++|++++|+|+.+| .+|+++++++++.+.++++|++.++++...++...+.
T Consensus       150 ~~~ta~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~  228 (345)
T cd08286         150 ILPTGYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVL  228 (345)
T ss_pred             hhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHH
Confidence            99999998766666 8999999987 6999999999999999 6999998989998999999999999988766655554


Q ss_pred             HH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          292 EE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       292 ~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .. .+.++|++|||+|+ ..++.++++|+++|+|+.+|.......   +   +    ...++.|++++.+.
T Consensus       229 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~---~---~----~~~~~~~~~~~~~~  289 (345)
T cd08286         229 ELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVD---L---H----LEKLWIKNITITTG  289 (345)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCC---c---C----HHHHhhcCcEEEee
Confidence            44 45689999999985 678899999999999999997543111   1   1    12346788888763

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.2e-30  Score=240.53  Aligned_cols=222  Identities=30%  Similarity=0.430  Sum_probs=191.7

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++++.+   ...+.+++.+.| .+.++||+|++.++++|+.|++...+.          ..|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~---~~~~~~~~~~~p-~~~~~ev~v~v~~~~i~~~d~~~~~~~----------~~~~~~g~e~~G~v~~~   66 (305)
T cd08270           1 MRALVVDPDA---PLRLRLGEVPDP-QPAPHEALVRVAAISLNRGELKFAAER----------PDGAVPGWDAAGVVERA   66 (305)
T ss_pred             CeEEEEccCC---CceeEEEecCCC-CCCCCEEEEEEEEEecCHHHHHhhccC----------CCCCcccceeEEEEEEe
Confidence            6788887643   234777788888 689999999999999999999876421          12457999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHH
Q 018013          167 GDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTG  243 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG  243 (362)
                      |++++.|++||+|+++. .|+|++|+.++.+.++++|++  +.++++++..+.+||+++......+|++|+|+|++|++|
T Consensus        67 G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g  146 (305)
T cd08270          67 AADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVG  146 (305)
T ss_pred             CCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHH
Confidence            99999999999999986 799999999999999999985  567778899999999999888775699999999999999


Q ss_pred             HHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEE
Q 018013          244 QFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRL  323 (362)
Q Consensus       244 ~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~  323 (362)
                      ++++++|+..|++|+.+++++++.+.++++|++.+++....        ..++++|+++|++|+..+..++++++.+|++
T Consensus       147 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~  218 (305)
T cd08270         147 RFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSE--------LSGAPVDLVVDSVGGPQLARALELLAPGGTV  218 (305)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecccc--------ccCCCceEEEECCCcHHHHHHHHHhcCCCEE
Confidence            99999999999999999999999999999998766543321        1235799999999998899999999999999


Q ss_pred             EEEcCcc
Q 018013          324 IVIGMIS  330 (362)
Q Consensus       324 v~~G~~~  330 (362)
                      +.+|...
T Consensus       219 v~~g~~~  225 (305)
T cd08270         219 VSVGSSS  225 (305)
T ss_pred             EEEeccC
Confidence            9999765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.7e-30  Score=246.16  Aligned_cols=250  Identities=26%  Similarity=0.408  Sum_probs=203.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+..    ..+++.|.| ++.++||+|+|.++++|++|++...|.++.       ..|.++|+|++|+|+++
T Consensus         1 mka~~~~~~~~~----~~~~~~~~p-~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-------~~~~~~g~e~~G~V~~~   68 (338)
T PRK09422          1 MKAAVVNKDHTG----DVVVEKTLR-PLKHGEALVKMEYCGVCHTDLHVANGDFGD-------KTGRILGHEGIGIVKEV   68 (338)
T ss_pred             CeEEEecCCCCC----ceEEEecCC-CCCCCeEEEEEEEEeechhHHHHHcCCCCC-------CCCccCCcccceEEEEE
Confidence            788999865432    237888888 799999999999999999999988876531       23568999999999999


Q ss_pred             CCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |++++.|++||+|++.                             ..|+|++|+.++.+.++++|++  +.++++++..+
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~  148 (338)
T PRK09422         69 GPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAG  148 (338)
T ss_pred             CCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcch
Confidence            9999999999999861                             1589999999999999999985  56777889999


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHH
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEE  293 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~  293 (362)
                      .|||+++.....++|++|+|+| +|++|++++++|+. .|++|+++++++++.+.++++|++.++++.. .++.+.+...
T Consensus       149 ~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  227 (338)
T PRK09422        149 VTTYKAIKVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEK  227 (338)
T ss_pred             hHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHh
Confidence            9999999444339999999999 79999999999998 5999999999999999999999999998864 5555666655


Q ss_pred             CCCcee-EEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          294 FPKGFD-IIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       294 ~~~g~D-vvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .+ ++| +++++.+++.+..++++++++|+|+.+|.......   .   +    ...+..++.++.|+
T Consensus       228 ~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~---~----~~~~~~~~~~~~~~  284 (338)
T PRK09422        228 TG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMD---L---S----IPRLVLDGIEVVGS  284 (338)
T ss_pred             cC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCce---e---c----HHHHhhcCcEEEEe
Confidence            55 688 55666667889999999999999999997643211   1   1    12355677777664

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.98  E-value=4.9e-30  Score=243.53  Aligned_cols=255  Identities=25%  Similarity=0.347  Sum_probs=207.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++...+    +.+++.+.|.| +++++||+|++.++++|++|++++.+.....   .....|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~----~~~~~~~~~~p-~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~---~~~~~p~~~g~e~~G~V~~v   72 (341)
T PRK05396          1 MKALVKLKAE----PGLWLTDVPVP-EPGPNDVLIKVKKTAICGTDVHIYNWDEWAQ---KTIPVPMVVGHEFVGEVVEV   72 (341)
T ss_pred             CceEEEecCC----CceEEEECCCC-CCCCCeEEEEEEEEEEcccchHhhcCCCccc---ccCCCCcccceeeEEEEEEe
Confidence            6788887655    34889999999 7999999999999999999998776532110   12346778999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLT  217 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~t  217 (362)
                      |++++.+++||+|++.                            .+|+|++|+.+|.+.++++|++ ....+++..++.+
T Consensus        73 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~  152 (341)
T PRK05396         73 GSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGN  152 (341)
T ss_pred             CCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHH
Confidence            9999999999999975                            3689999999999999999986 4444455567777


Q ss_pred             HHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-C
Q 018013          218 ASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-P  295 (362)
Q Consensus       218 A~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~  295 (362)
                      +++++.. ..++|++|+|+| +|++|++++|+|++.|+ +|++++.++++.+.++++|+++++++++.++.+.+.... +
T Consensus       153 ~~~~~~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  230 (341)
T PRK05396        153 AVHTALS-FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMT  230 (341)
T ss_pred             HHHHHHc-CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCC
Confidence            7776643 237899999987 69999999999999999 688898889999999999999999988777777666554 5


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++|++|||.|+ ..++.++++++++|+++.+|..+...     .   .+  ...++.+++++.|+.
T Consensus       231 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~---~~--~~~~~~~~~~l~~~~  287 (341)
T PRK05396        231 EGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDM-----A---ID--WNKVIFKGLTIKGIY  287 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC-----c---cc--HHHHhhcceEEEEEE
Confidence            789999999885 67899999999999999999865311     1   11  135778888888864

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.98  E-value=8.5e-30  Score=241.90  Aligned_cols=253  Identities=26%  Similarity=0.329  Sum_probs=207.2

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++..+     .+.+++.+.| ++.+++|+|++.++++|+.|+....|.++      ....|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~-----~~~~~~~~~~-~l~~~~v~i~v~~~~l~~~d~~~~~g~~~------~~~~~~~~g~~~~G~V~~~   68 (343)
T cd08235           1 MKAAVLHGPN-----DVRLEEVPVP-EPGPGEVLVKVRACGICGTDVKKIRGGHT------DLKPPRILGHEIAGEIVEV   68 (343)
T ss_pred             CeEEEEecCC-----ceEEEEccCC-CCCCCeEEEEEEEeeeccccHHHHcCCCc------cCCCCcccccceEEEEEee
Confidence            6788887654     3788888888 78999999999999999999998877653      1234668999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCC-----eeeCCCC-CHHHHHhh
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKH-----ILPVARP-DPEVVAML  212 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~-----~~~ip~~-~~~~a~l~  212 (362)
                      |++++.|++||+|+++                            ..|+|++|+.++.+.     ++++|++ ....++..
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~  148 (343)
T cd08235          69 GDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV  148 (343)
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh
Confidence            9999999999999986                            358999999999998     9999986 33334444


Q ss_pred             hhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHH
Q 018013          213 TSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFK  291 (362)
Q Consensus       213 ~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~  291 (362)
                      .++.+||+++.....++|++|+|+| +|++|++++|+|+..|++ |+++++++++.+.++++|+++++++++.++.+.+.
T Consensus       149 ~~~~~a~~~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~  227 (343)
T cd08235         149 EPLACCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVR  227 (343)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHH
Confidence            7889999999776339999999996 799999999999999998 99999999999999999999999988877766555


Q ss_pred             HH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          292 EE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       292 ~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .. .++++|++|||.++ ..+..++++++++|+++.+|........ ..   +    ...++.+++++.++
T Consensus       228 ~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~-~~---~----~~~~~~~~~~l~~~  290 (343)
T cd08235         228 ELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTV-NI---D----PNLIHYREITITGS  290 (343)
T ss_pred             HHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCc-cc---C----HHHHhhCceEEEEE
Confidence            54 45679999999995 5888999999999999999876543210 01   1    13456677777665

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.98  E-value=2.6e-30  Score=245.13  Aligned_cols=248  Identities=25%  Similarity=0.378  Sum_probs=207.3

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG  167 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG  167 (362)
                      |+|+.+..+    ..+++.+.+.| ++.++||+|++.++++|++|++...|.+.      ...+|.++|||++|+|+++|
T Consensus         1 ~~~~~~~~~----~~~~~~~~~~p-~~~~~evlirv~a~~i~~~d~~~~~g~~~------~~~~p~~~g~e~~G~V~~vG   69 (337)
T cd05283           1 KGYAARDAS----GKLEPFTFERR-PLGPDDVDIKITYCGVCHSDLHTLRNEWG------PTKYPLVPGHEIVGIVVAVG   69 (337)
T ss_pred             CceEEecCC----CCceEEeccCC-CCCCCeEEEEEEEecccchHHHHhcCCcC------CCCCCcccCcceeeEEEEEC
Confidence            456666555    34889999999 89999999999999999999999888653      23457889999999999999


Q ss_pred             CCCCCCCCCCeEEE------------------------------------ecCCCeeeEEEeeCCCeeeCCCC--CHHHH
Q 018013          168 DSVNNVKVGTPAAI------------------------------------MTFGSYAEFTMVPSKHILPVARP--DPEVV  209 (362)
Q Consensus       168 ~~v~~~~~Gd~V~~------------------------------------~~~g~~~~~~~v~~~~~~~ip~~--~~~~a  209 (362)
                      +++++|++||+|+.                                    ..+|+|++|+.++.+.++++|++  ..+++
T Consensus        70 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa  149 (337)
T cd05283          70 SKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAA  149 (337)
T ss_pred             CCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhh
Confidence            99999999999973                                    23589999999999999999985  45677


Q ss_pred             HhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHH
Q 018013          210 AMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV  289 (362)
Q Consensus       210 ~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~  289 (362)
                      .++..+.+||+++.+...++|++++|.| +|++|++++++|+..|++|+++++++++.+.++++|++.+++....+... 
T Consensus       150 ~l~~~~~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~-  227 (337)
T cd05283         150 PLLCAGITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMK-  227 (337)
T ss_pred             hhhhHHHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhh-
Confidence            7888999999999887668999999976 79999999999999999999999999999999999999988876544321 


Q ss_pred             HHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          290 FKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       290 ~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                         ..++++|++|||+|+. .+..++++++++|+++.+|..+....   +   +    +..++.|++++.|+.
T Consensus       228 ---~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~---~----~~~~~~~~~~i~~~~  287 (337)
T cd05283         228 ---KAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLP---V---P----PFPLIFGRKSVAGSL  287 (337)
T ss_pred             ---hccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCc---c---C----HHHHhcCceEEEEec
Confidence               2356799999999986 48999999999999999998654221   1   1    123567999998864

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=5.8e-30  Score=241.42  Aligned_cols=229  Identities=31%  Similarity=0.442  Sum_probs=198.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++...    +.+.+.+.|.| ++.++||+|++.++++|++|++...|.++.      ...|.++|+|++|+|+.+
T Consensus         1 m~a~~~~~~~----~~~~~~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~------~~~~~~~g~e~~G~v~~~   69 (332)
T cd08259           1 MKAAILHKPN----KPLQIEEVPDP-EPGPGEVLIKVKAAGVCYRDLLFWKGFFPR------GKYPLILGHEIVGTVEEV   69 (332)
T ss_pred             CeEEEEecCC----CceEEEEccCC-CCCCCeEEEEEEEEecchhhhHHhcCCCCC------CCCCeeccccceEEEEEE
Confidence            6888887622    34788889988 799999999999999999999998886542      234678999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |++++.|++||+|+++.                            .|+|++|++++...++++|++  +.+++.++.++.
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~  149 (332)
T cd08259          70 GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVG  149 (332)
T ss_pred             CCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHH
Confidence            99999999999999875                            689999999999999999985  467778889999


Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      +||+++.. .. +++++++|+|++|++|++++++++..|++|+++++++++.+.++++|.+.+++..+  +.+.+.... 
T Consensus       150 ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-  225 (332)
T cd08259         150 TAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLG-  225 (332)
T ss_pred             HHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhcc-
Confidence            99999988 55 89999999999999999999999999999999999999999998899888876654  444444333 


Q ss_pred             CceeEEEECCChHHHHHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       ++|+++||+|......++++++++|+++.+|....
T Consensus       226 -~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~  260 (332)
T cd08259         226 -GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTP  260 (332)
T ss_pred             -CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCC
Confidence             79999999999889999999999999999988654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.98  E-value=1e-29  Score=240.37  Aligned_cols=255  Identities=31%  Similarity=0.448  Sum_probs=213.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++...+...   +.+.+.+.| .+++++|+|++.++++|+.|+....|.++.     ....|.++|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-----~~~~~~~~g~~~~G~v~~~   71 (338)
T cd08254           1 MKAWRFHKGSKGL---LVLEEVPVP-EPGPGEVLVKVKAAGVCHSDLHILDGGVPT-----LTKLPLTLGHEIAGTVVEV   71 (338)
T ss_pred             CeeEEEecCCCCc---eEEeccCCC-CCCCCeEEEEEEEEeeccHhHHHHcCCCcc-----cCCCCEeccccccEEEEEE
Confidence            6888888766531   566777877 789999999999999999999998887642     2345678999999999999


Q ss_pred             CCCCCCCCCCCeEEE------------------e----------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAI------------------M----------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~------------------~----------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |++++.+++||+|+.                  +          ..|+|++|+.++.+.++++|++  ..+++.++.++.
T Consensus        72 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~  151 (338)
T cd08254          72 GAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL  151 (338)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence            999999999999986                  1          1489999999999999999985  456777889999


Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      +||+++..... +++++|||.| +|++|++++++|+..|++|++++.++++.+.++++|++++++..+....+.++...+
T Consensus       152 ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  230 (338)
T cd08254         152 TPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLG  230 (338)
T ss_pred             HHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcC
Confidence            99999988887 9999999976 799999999999999999999999999999999999999998877666665545566


Q ss_pred             CceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          296 KGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++|+++||+| ...+..++++|+++|+++.+|.......      .+    ...++.++.++.|++
T Consensus       231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~----~~~~~~~~~~~~~~~  287 (338)
T cd08254         231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLT------VD----LSDLIARELRIIGSF  287 (338)
T ss_pred             CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCc------cC----HHHHhhCccEEEEec
Confidence            78999999998 4688999999999999999987543211      11    134677888887754

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.98  E-value=9.2e-31  Score=248.44  Aligned_cols=233  Identities=24%  Similarity=0.362  Sum_probs=202.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++.++   ...+++++.+.| .++++||+|++.++++|++|+....+.+.       ...|.++|+|++|+|+.+
T Consensus         1 m~a~~~~~~~---~~~~~~~~~~~p-~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-------~~~~~~~g~e~~G~v~~v   69 (339)
T cd08249           1 QKAAVLTGPG---GGLLVVVDVPVP-KPGPDEVLVKVKAVALNPVDWKHQDYGFI-------PSYPAILGCDFAGTVVEV   69 (339)
T ss_pred             CceEEeccCC---CCcccccCCCCC-CCCCCEEEEEEEEEEcCchheeeeecccc-------cCCCceeeeeeeEEEEEe
Confidence            7889998764   234778888888 78999999999999999999987755431       123567999999999999


Q ss_pred             CCCCCCCCCCCeEEEecC---------CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC--------
Q 018013          167 GDSVNNVKVGTPAAIMTF---------GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP--------  227 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~~---------g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~--------  227 (362)
                      |++++.|++||+|+++..         |+|++|++++.+.++++|++  +.+++.++.++.+||+++.+...        
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~  149 (339)
T cd08249          70 GSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKP  149 (339)
T ss_pred             CCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCC
Confidence            999999999999999864         89999999999999999985  45667788899999999876532        


Q ss_pred             ---CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          228 ---ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       228 ---~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                         +++++|+|+|++|++|++++++|+..|++|+.++ ++++.+.++++|+++++++.+.++.+.++...++++|++||+
T Consensus       150 ~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~  228 (339)
T cd08249         150 SPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDC  228 (339)
T ss_pred             CCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEe
Confidence               6899999999999999999999999999999988 568889999999999999988777777777777889999999


Q ss_pred             CCh-HHHHHHHHHhcc--CCEEEEEcCccc
Q 018013          305 VGG-DMFNLCLKALAV--YGRLIVIGMISQ  331 (362)
Q Consensus       305 ~g~-~~~~~~~~~l~~--~G~~v~~G~~~~  331 (362)
                      +|+ ..+..+++++++  +|+|+.+|....
T Consensus       229 ~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~  258 (339)
T cd08249         229 ISTPESAQLCAEALGRSGGGKLVSLLPVPE  258 (339)
T ss_pred             eccchHHHHHHHHHhccCCCEEEEecCCCc
Confidence            997 899999999999  999999987654

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=8.8e-30  Score=241.36  Aligned_cols=229  Identities=26%  Similarity=0.382  Sum_probs=194.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++.++     .+.+.+.+.| .+.++||+|+|.++++|+.|+....|.++.      ...|.++|+|++|+|+++
T Consensus         1 ~~a~~~~~~~-----~~~~~~~~~~-~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~------~~~~~~~g~e~~G~V~~~   68 (337)
T cd08261           1 MKALVCEKPG-----RLEVVDIPEP-VPGAGEVLVRVKRVGICGSDLHIYHGRNPF------ASYPRILGHELSGEVVEV   68 (337)
T ss_pred             CeEEEEeCCC-----ceEEEECCCC-CCCCCeEEEEEEEEeEcccChHHHcCCCCc------CCCCcccccccEEEEEEe
Confidence            6888887543     4788889998 789999999999999999999988876542      234668999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLT  217 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~t  217 (362)
                      |++++.|++||+|+..                            ..|+|++|+.++++ ++++|++ ..+.++....+.+
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~  147 (337)
T cd08261          69 GEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAI  147 (337)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHH
Confidence            9999999999999872                            26899999999999 9999985 3333333467888


Q ss_pred             HHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CC
Q 018013          218 ASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FP  295 (362)
Q Consensus       218 A~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~  295 (362)
                      +++++ .... ++|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++++|+++++++...++.+.+... .+
T Consensus       148 a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~  225 (337)
T cd08261         148 GAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDG  225 (337)
T ss_pred             HHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCC
Confidence            99888 4455 9999999996 7999999999999999999999999999999999999999999887776666554 44


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcc
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +++|++|||.|+ +.+..++++|+++|+++.+|...
T Consensus       226 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~  261 (337)
T cd08261         226 EGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSK  261 (337)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCC
Confidence            679999999975 68899999999999999998765

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.98  E-value=3.2e-30  Score=243.90  Aligned_cols=250  Identities=26%  Similarity=0.370  Sum_probs=205.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++.++.    .+++++.+.| .+.++||+|++.++++|++|++...|.++      ...+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~~~-~~~~~~v~V~v~~~~i~~~d~~~~~g~~~------~~~~~~~~g~e~~G~v~~~   69 (334)
T PRK13771          1 MKAVILPGFKQ----GYRIEEVPDP-KPGKDEVVIKVNYAGLCYRDLLQLQGFYP------RMKYPVILGHEVVGTVEEV   69 (334)
T ss_pred             CeeEEEcCCCC----CcEEEeCCCC-CCCCCeEEEEEEEEeechhhHHHhcCCCC------CCCCCeeccccceEEEEEe
Confidence            68888876553    4788999998 79999999999999999999998877653      2344678999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |++++.+++||+|++..                            .|+|++|+.++.+.++++|++  ..+++.++..+.
T Consensus        70 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~  149 (334)
T PRK13771         70 GENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTG  149 (334)
T ss_pred             CCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHH
Confidence            99999999999999875                            689999999999999999985  456667788999


Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      +||+++.....+++++|+|+|++|++|++++|+|+..|++|+++++++++.+.++++ +++++++.  ++.+.+... + 
T Consensus       150 ~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~-~-  224 (334)
T PRK13771        150 MVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKI-G-  224 (334)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhc-C-
Confidence            999999887339999999999989999999999999999999999999999999888 77777665  344444433 3 


Q ss_pred             ceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          297 GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       297 g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++|+++||+|+.....++++++++|+++.+|.......   +. ..+    ..++.+++++.|+
T Consensus       225 ~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~-~~~----~~~~~~~~~~~~~  280 (334)
T PRK13771        225 GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPT---YS-LRL----GYIILKDIEIIGH  280 (334)
T ss_pred             CCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCC---cc-cCH----HHHHhcccEEEEe
Confidence            69999999999889999999999999999998653211   00 011    1235677887764

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2e-29  Score=243.30  Aligned_cols=259  Identities=24%  Similarity=0.274  Sum_probs=204.6

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccC-CCCCCCCCCCCCCCCceEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFS-DGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      +.+...++...      .+++++.+.| +++++||+|++.++++|++|++...+.... ...+....+|.++|||++|+|
T Consensus        27 ~~~~~~~~~~~------~~~~~~~~~p-~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   99 (384)
T cd08265          27 TNLGSKVWRYP------ELRVEDVPVP-NLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVV   99 (384)
T ss_pred             ccceeEEEeCC------CEEEEECCCC-CCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEE
Confidence            34455555532      2788999999 799999999999999999999887632100 000001346788999999999


Q ss_pred             EEeCCCCCCCCCCCeEEE---------------------------ec-CCCeeeEEEeeCCCeeeCCCC--------CHH
Q 018013          164 AAVGDSVNNVKVGTPAAI---------------------------MT-FGSYAEFTMVPSKHILPVARP--------DPE  207 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~---------------------------~~-~g~~~~~~~v~~~~~~~ip~~--------~~~  207 (362)
                      +++|++++.|++||+|++                           +. .|+|++|++++.+.++++|+.        ..+
T Consensus       100 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~  179 (384)
T cd08265         100 EKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE  179 (384)
T ss_pred             EEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH
Confidence            999999999999999985                           22 689999999999999999973        456


Q ss_pred             HHHhhhhHHHHHHHHHHh-CC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCc
Q 018013          208 VVAMLTSGLTASIALEQA-GP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       208 ~a~l~~~~~tA~~al~~~-~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~  284 (362)
                      .++++.++++||+++... .. ++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++++|+++++++++.
T Consensus       180 ~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~  258 (384)
T cd08265         180 AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKM  258 (384)
T ss_pred             HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccc
Confidence            778888999999999665 45 9999999995 79999999999999999 79999999999988999999999987743


Q ss_pred             ---cHHHHHHHH-CCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEE
Q 018013          285 ---DIKTVFKEE-FPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVV  358 (362)
Q Consensus       285 ---~~~~~~~~~-~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~  358 (362)
                         ++.+.+... .++++|+|+|+.|+  ..+..++++|+++|+|+.+|..+....   .   +    ...+..+..++.
T Consensus       259 ~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~---~----~~~~~~~~~~l~  328 (384)
T cd08265         259 RDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVP---L---H----LEVLQVRRAQIV  328 (384)
T ss_pred             ccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCc---c---c----HHHHhhCceEEE
Confidence               555555544 45789999999995  478899999999999999997643111   1   1    124666777777


Q ss_pred             Eec
Q 018013          359 CIH  361 (362)
Q Consensus       359 G~~  361 (362)
                      |.+
T Consensus       329 ~~~  331 (384)
T cd08265         329 GAQ  331 (384)
T ss_pred             Eee
Confidence            764

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.97  E-value=1.6e-29  Score=237.88  Aligned_cols=253  Identities=22%  Similarity=0.300  Sum_probs=205.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++..  +.+++++.+.| +++++||+|++.++++|++|+....|.+..     ...+|.++|+|++|+|++ 
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~V~~-   71 (324)
T cd08288           1 FKALVLEKDDGG--TSAELRELDES-DLPEGDVTVEVHYSTLNYKDGLAITGKGGI-----VRTFPLVPGIDLAGTVVE-   71 (324)
T ss_pred             CeeEEEeccCCC--cceEEEECCCC-CCCCCeEEEEEEEEecCHHHHHHhcCCccc-----cCCCCCccccceEEEEEe-
Confidence            789999876643  45889999999 799999999999999999999988775421     123567789999999998 


Q ss_pred             CCCCCCCCCCCeEEEec-------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHH---HhCCC-CCCEE
Q 018013          167 GDSVNNVKVGTPAAIMT-------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALE---QAGPA-SGKKV  233 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~---~~~~~-~g~~V  233 (362)
                       ++++++++||+|+++.       +|+|++|++++.+.++++|++  ..+++.++..+++|++++.   ..... ++++|
T Consensus        72 -~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~v  150 (324)
T cd08288          72 -SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPV  150 (324)
T ss_pred             -CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEE
Confidence             7778899999999864       689999999999999999985  4567788888888887765   34444 67899


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLC  313 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~  313 (362)
                      +|+|++|++|++++|+|+.+|++|++++.+++|.+.++++|+++++++.+...  .+......++|.++|++++..+..+
T Consensus       151 lI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~  228 (324)
T cd08288         151 LVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKERWAGAVDTVGGHTLANV  228 (324)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccCcccEEEECCcHHHHHHH
Confidence            99999999999999999999999999999999999999999999998865332  3334445568999999998778888


Q ss_pred             HHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          314 LKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       314 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +..++.+|+++.+|.... ..   .. .+    +..++.|+.++.|+
T Consensus       229 ~~~~~~~g~~~~~G~~~~-~~---~~-~~----~~~~~~~~~~~~~~  266 (324)
T cd08288         229 LAQTRYGGAVAACGLAGG-AD---LP-TT----VMPFILRGVTLLGI  266 (324)
T ss_pred             HHHhcCCCEEEEEEecCC-CC---CC-cc----hhhhhccccEEEEE
Confidence            899999999999998632 11   11 11    12345788888885

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=2.6e-29  Score=237.07  Aligned_cols=262  Identities=28%  Similarity=0.405  Sum_probs=207.0

Q ss_pred             eEEEEeccCC--CccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           88 EKLVVHTLNH--NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        88 ~a~~~~~~~~--~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      ++|+++..+.  ...+.+.+++.+.| ++.+++|+||+.++++|+.|.....+......   ....+.++|+|++|+|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~g~e~~G~V~~   78 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELVEVPLP-ELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSP---PVQLGEPMRGGGVGEVVE   78 (329)
T ss_pred             cEEEEeccCCCCCCccceeEEeccCC-CCCCCeEEEEEEEEecCHHHhhhhccCcccCC---CccCCCcccCceEEEEEe
Confidence            5566654431  23456888999988 79999999999999999988765554321100   112245689999999999


Q ss_pred             eCCCCCCCCCCCeEEEecCCCeeeEEEeeC-CCeeeCCCCC----HHHHH-hhhhHHHHHHHHHHhCC-CCCCEEEEEcC
Q 018013          166 VGDSVNNVKVGTPAAIMTFGSYAEFTMVPS-KHILPVARPD----PEVVA-MLTSGLTASIALEQAGP-ASGKKVLVTAA  238 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~-~~~~~ip~~~----~~~a~-l~~~~~tA~~al~~~~~-~~g~~VlI~ga  238 (362)
                      +|++  +|++||+|+.+  ++|++|+.++. +.++++|++.    ..+++ ++.++.+||+++..... .++++|+|+|+
T Consensus        79 ~G~~--~~~~Gd~V~~~--~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~  154 (329)
T cd05288          79 SRSP--DFKVGDLVSGF--LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAA  154 (329)
T ss_pred             cCCC--CCCCCCEEecc--cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecC
Confidence            9964  79999999876  48999999999 9999999853    34555 88999999999988776 89999999999


Q ss_pred             CchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHh
Q 018013          239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKAL  317 (362)
Q Consensus       239 ~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l  317 (362)
                      +|++|++++|+|+..|++|+++++++++.+.+++ +|+++++++++.++.+.+....++++|++|||+|+..+..+++++
T Consensus       155 ~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l  234 (329)
T cd05288         155 AGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILDAALTLL  234 (329)
T ss_pred             cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHHHHHHHHHhc
Confidence            9999999999999999999999999999999987 999999998876666666655567899999999999999999999


Q ss_pred             ccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          318 AVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       318 ~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++|+|+.+|..+...........+    ...++.+++++.|+.
T Consensus       235 ~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  274 (329)
T cd05288         235 NKGGRIALCGAISQYNATEPPGPKN----LGNIITKRLTMQGFI  274 (329)
T ss_pred             CCCceEEEEeeccCccccccccccc----HHHHhhCcceEEeec
Confidence            9999999999876543211100111    123567888888753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.97  E-value=1.4e-29  Score=240.57  Aligned_cols=230  Identities=24%  Similarity=0.328  Sum_probs=195.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCC-CCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPI-KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      |+++++..+.     .+.+++.+.| .+ +++||+|++.++++|+.|++...|.++       ...|..+|+|++|+|++
T Consensus         1 ~~a~~~~~~~-----~~~~~~~~~p-~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-------~~~~~~~g~e~~G~V~~   67 (344)
T cd08284           1 MKAVVFKGPG-----DVRVEEVPIP-QIQDPTDAIVKVTAAAICGSDLHIYRGHIP-------STPGFVLGHEFVGEVVE   67 (344)
T ss_pred             CeeEEEecCC-----CceEEeccCC-CCCCCCeEEEEEEEeeccccchhhhcCCCC-------CCCCcccccceEEEEEe
Confidence            6788887542     4889999999 55 599999999999999999998877653       23356799999999999


Q ss_pred             eCCCCCCCCCCCeEEEec--------------------------------CCCeeeEEEeeCC--CeeeCCCC--CHHHH
Q 018013          166 VGDSVNNVKVGTPAAIMT--------------------------------FGSYAEFTMVPSK--HILPVARP--DPEVV  209 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~--------------------------------~g~~~~~~~v~~~--~~~~ip~~--~~~~a  209 (362)
                      +|++++.+++||+|++..                                .|+|++|+.++..  .++++|++  +.+++
T Consensus        68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~  147 (344)
T cd08284          68 VGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAAL  147 (344)
T ss_pred             eCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhh
Confidence            999999999999999853                                4899999999975  99999985  46777


Q ss_pred             HhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHH
Q 018013          210 AMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKT  288 (362)
Q Consensus       210 ~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~  288 (362)
                      +++..+.|||+++.....++|++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++++|+. .++.+..++..
T Consensus       148 ~l~~~~~ta~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~  225 (344)
T cd08284         148 LLGDILPTGYFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVE  225 (344)
T ss_pred             hhcCchHHHHhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHH
Confidence            8899999999999764338999999996 79999999999999997 899998888999998999975 46666666666


Q ss_pred             HHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCccc
Q 018013          289 VFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       289 ~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .+.+. .++++|++||++++ +.+..++++++++|++|.+|....
T Consensus       226 ~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~  270 (344)
T cd08284         226 RVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTA  270 (344)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCC
Confidence            55554 45789999999995 688999999999999999998763

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.97  E-value=1.5e-29  Score=239.29  Aligned_cols=250  Identities=27%  Similarity=0.397  Sum_probs=204.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++..++     .+.+.+.+.| +++++||+|++.++++|+.|+....|.++       ..+|.++|+|++|+|+.+
T Consensus         1 ~~a~~~~~~~-----~~~~~~~~~~-~l~~~~v~v~v~~~~l~~~d~~~~~g~~~-------~~~p~~~g~~~~G~v~~v   67 (334)
T cd08234           1 MKALVYEGPG-----ELEVEEVPVP-EPGPDEVLIKVAACGICGTDLHIYEGEFG-------AAPPLVPGHEFAGVVVAV   67 (334)
T ss_pred             CeeEEecCCC-----ceEEEeccCC-CCCCCeEEEEEEEEeEchhhhHHhcCCCC-------CCCCcccccceEEEEEEe
Confidence            6888887654     3788899999 79999999999999999999999888753       226778999999999999


Q ss_pred             CCCCCCCCCCCeEEE-------------------------e---cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHH
Q 018013          167 GDSVNNVKVGTPAAI-------------------------M---TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLT  217 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~-------------------------~---~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~t  217 (362)
                      |+++++|++||+|++                         +   ..|+|++|+.++.+.++++|++ ....++...++.+
T Consensus        68 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~  147 (334)
T cd08234          68 GSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC  147 (334)
T ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHH
Confidence            999999999999987                         2   3589999999999999999985 3333344477889


Q ss_pred             HHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          218 ASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       218 A~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      +++++ .... ++|++|+|+| +|++|++++++|+..|++ |+++++++++.+.++++|+++++++...+.... +...+
T Consensus       148 a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~  224 (334)
T cd08234         148 AVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ-KEDNP  224 (334)
T ss_pred             HHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH-HHhcC
Confidence            99998 4455 9999999997 699999999999999997 899999999999999999998888877665444 44566


Q ss_pred             CceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          296 KGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       296 ~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +++|++|||++ ...+..++++|+++|+|+.+|..+....   ..   ++  ...+..+++++.++
T Consensus       225 ~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~---~~--~~~~~~~~~~~~~~  282 (334)
T cd08234         225 YGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDAR---VS---IS--PFEIFQKELTIIGS  282 (334)
T ss_pred             CCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCC---cc---cC--HHHHHhCCcEEEEe
Confidence            78999999997 4788899999999999999998764111   11   11  11244577777765

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.97  E-value=1.6e-29  Score=239.10  Aligned_cols=235  Identities=26%  Similarity=0.288  Sum_probs=199.0

Q ss_pred             ceEEEEeccCCCc-cCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNF-RDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~-~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      |++++++.++..- .+.+..++.+.| .+.+++|+|++.++++|++|++...|.++      ....|.++|+|++|+|+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~------~~~~~~~~g~e~~G~v~~   73 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKP-VPGGRDLLVRVEAVSVNPVDTKVRAGGAP------VPGQPKILGWDASGVVEA   73 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCC-CCCCCEEEEEEEEEEcCHHHHHHHcCCCC------CCCCCcccccceEEEEEE
Confidence            5788888765321 013566677777 68899999999999999999998877543      123466899999999999


Q ss_pred             eCCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CC-----CCEE
Q 018013          166 VGDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-AS-----GKKV  233 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~-----g~~V  233 (362)
                      +|+++..|++||+|.++.    .|+|++|+.++...++++|++  ..+++.++..+.+||+++..... ++     |++|
T Consensus        74 ~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~v  153 (336)
T cd08252          74 VGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTL  153 (336)
T ss_pred             cCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEE
Confidence            999999999999999874    489999999999999999985  45677788899999999877666 66     9999


Q ss_pred             EEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-HHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFN  311 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~  311 (362)
                      +|+|++|++|++++|+|+.+| ++|+++++++++.+.++++|+++++++.. ++.+.+....++++|++|||+|+ ..+.
T Consensus       154 lV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~  232 (336)
T cd08252         154 LIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHWD  232 (336)
T ss_pred             EEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHHH
Confidence            999999999999999999999 89999999999999999999999998774 55555554455689999999994 7899


Q ss_pred             HHHHHhccCCEEEEEcCc
Q 018013          312 LCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       312 ~~~~~l~~~G~~v~~G~~  329 (362)
                      .++++++++|+++.+|..
T Consensus       233 ~~~~~l~~~g~~v~~g~~  250 (336)
T cd08252         233 AMAELIAPQGHICLIVDP  250 (336)
T ss_pred             HHHHHhcCCCEEEEecCC
Confidence            999999999999999865

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.97  E-value=2.5e-29  Score=234.99  Aligned_cols=258  Identities=33%  Similarity=0.474  Sum_probs=214.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+..  ..+.+.+.+.| .+.+++|+|++.++++|+.|++...|.++.     ...+|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-----~~~~~~~~g~e~~G~v~~v   72 (323)
T cd05276           1 MKAIVIKEPGGP--EVLELGEVPKP-APGPGEVLIRVAAAGVNRADLLQRQGLYPP-----PPGASDILGLEVAGVVVAV   72 (323)
T ss_pred             CeEEEEecCCCc--ccceEEecCCC-CCCCCEEEEEEEEeecCHHHHHHhCCCCCC-----CCCCCCcccceeEEEEEee
Confidence            688888865532  34667777777 789999999999999999999888775532     2345778999999999999


Q ss_pred             CCCCCCCCCCCeEEEecC-CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchH
Q 018013          167 GDSVNNVKVGTPAAIMTF-GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGT  242 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~~-g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~v  242 (362)
                      |+++..+++||+|+++.. |+|++|+.++.+.++++|++  ..++++++.++.++|+++..... +++++|+|+|++|++
T Consensus        73 g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~i  152 (323)
T cd05276          73 GPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGV  152 (323)
T ss_pred             CCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChH
Confidence            999999999999999854 99999999999999999985  45777888999999999987766 899999999999999


Q ss_pred             HHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCC
Q 018013          243 GQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYG  321 (362)
Q Consensus       243 G~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G  321 (362)
                      |++++++++..|++|+++++++++.+.++++|++.+++....++.+.+... .++++|+++|+.|+......+++++++|
T Consensus       153 g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g  232 (323)
T cd05276         153 GTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDG  232 (323)
T ss_pred             HHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCC
Confidence            999999999999999999999999999988999888888776665555444 4568999999999988889999999999


Q ss_pred             EEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          322 RLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       322 ~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++.+|..+.....  .   +    ...++.|++++.|+.
T Consensus       233 ~~i~~~~~~~~~~~--~---~----~~~~~~~~~~~~~~~  263 (323)
T cd05276         233 RLVLIGLLGGAKAE--L---D----LAPLLRKRLTLTGST  263 (323)
T ss_pred             EEEEEecCCCCCCC--C---c----hHHHHHhCCeEEEee
Confidence            99999986643321  1   1    123457888888764

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2e-29  Score=235.87  Aligned_cols=242  Identities=26%  Similarity=0.279  Sum_probs=199.5

Q ss_pred             ceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhh-cCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEE
Q 018013          102 ATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFS-SGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA  180 (362)
Q Consensus       102 ~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~-~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  180 (362)
                      .+++++.+.| ++.++||+|++.++++|+.|++.. .|..+..    ....|..+|+|++|+|+++|++++.+++||+|+
T Consensus         6 ~~~~~~~~~~-~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~----~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   80 (312)
T cd08269           6 RFEVEEHPRP-TPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV----YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA   80 (312)
T ss_pred             eeEEEECCCC-CCCCCeEEEEEEEeeecccchHHHccCCCCcc----cCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence            4788888888 799999999999999999999887 6654221    122467899999999999999999999999999


Q ss_pred             EecCCCeeeEEEeeCCCeeeCCCCCHHHHHhh-hhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE-E
Q 018013          181 IMTFGSYAEFTMVPSKHILPVARPDPEVVAML-TSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-V  257 (362)
Q Consensus       181 ~~~~g~~~~~~~v~~~~~~~ip~~~~~~a~l~-~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~-V  257 (362)
                      .+..|+|++|+.++++.++++|++. ..++++ .++++||+++. ... +++++|+|+| +|++|++++|+|+..|++ |
T Consensus        81 ~~~~g~~~~~~~v~~~~~~~lP~~~-~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~~~v  157 (312)
T cd08269          81 GLSGGAFAEYDLADADHAVPLPSLL-DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGARRV  157 (312)
T ss_pred             EecCCcceeeEEEchhheEECCCch-hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEE
Confidence            9988999999999999999999875 344444 78899999987 455 8999999996 799999999999999998 9


Q ss_pred             EEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          258 VATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       258 i~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +++++++++.+.++++|++++++....++.+.+... .+.++|+++||.|+ .....++++|+++|+|+.+|..+.....
T Consensus       158 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~  237 (312)
T cd08269         158 IAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRP  237 (312)
T ss_pred             EEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcc
Confidence            999999999998899999999987776776666554 45789999999985 6788999999999999999976521111


Q ss_pred             CCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          336 HGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       336 ~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                        +   +    +..+..+++++.++
T Consensus       238 --~---~----~~~~~~~~~~~~~~  253 (312)
T cd08269         238 --V---P----FQTWNWKGIDLINA  253 (312)
T ss_pred             --c---C----HHHHhhcCCEEEEe
Confidence              1   1    11356677776665

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.97  E-value=2.4e-29  Score=241.96  Aligned_cols=229  Identities=22%  Similarity=0.262  Sum_probs=192.5

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++     .+++++.|+|.+++++||+||+.++++|++|++...|.++       ...|.++|||++|+|+++
T Consensus         1 m~~~~~~~~~-----~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-------~~~p~~~g~e~~G~V~~v   68 (375)
T cd08282           1 MKAVVYGGPG-----NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-------AEPGLVLGHEAMGEVEEV   68 (375)
T ss_pred             CceEEEecCC-----ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-------CCCCceeccccEEEEEEe
Confidence            6788887543     3888999999334899999999999999999999988653       235788999999999999


Q ss_pred             CCCCCCCCCCCeEEEec--------------------------------------CCCeeeEEEeeCC--CeeeCCCC--
Q 018013          167 GDSVNNVKVGTPAAIMT--------------------------------------FGSYAEFTMVPSK--HILPVARP--  204 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~--------------------------------------~g~~~~~~~v~~~--~~~~ip~~--  204 (362)
                      |++++.+++||+|+...                                      .|+|++|+++|..  .++++|++  
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~  148 (375)
T cd08282          69 GSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDG  148 (375)
T ss_pred             CCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCC
Confidence            99999999999998621                                      2889999999976  89999985  


Q ss_pred             CH---HHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEE
Q 018013          205 DP---EVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVI  279 (362)
Q Consensus       205 ~~---~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~  279 (362)
                      +.   .+++++..+++||+++ .... ++|++|+|.| +|++|++++|+|+..|+ +|++++++++|.+.++++|+ ..+
T Consensus       149 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v  225 (375)
T cd08282         149 AKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPI  225 (375)
T ss_pred             hhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEe
Confidence            33   3466778899999999 4455 8999999976 79999999999999998 89999999999999999998 456


Q ss_pred             eCCCccHHHHHHHHCCCceeEEEECCChH------------HHHHHHHHhccCCEEEEEcCcc
Q 018013          280 NYKAEDIKTVFKEEFPKGFDIIYESVGGD------------MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       280 ~~~~~~~~~~~~~~~~~g~Dvvid~~g~~------------~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ++.+.++.+.+....++++|++|||+|+.            .+..++++++++|+++.+|..+
T Consensus       226 ~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~  288 (375)
T cd08282         226 DFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYV  288 (375)
T ss_pred             ccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccC
Confidence            77766666666665556799999999975            4889999999999999998765

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.6e-29  Score=238.28  Aligned_cols=225  Identities=33%  Similarity=0.509  Sum_probs=188.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++   .+.+++++.+.+ +++++||+|++.++++|++|+....+..       ...+|.++|||++|+|+++
T Consensus         1 ~~~~~~~~~~---~~~~~~~~~~~~-~~~~~ev~v~v~~~~i~~~d~~~~~~~~-------~~~~~~~~g~e~~G~v~~v   69 (325)
T cd08264           1 MKALVFEKSG---IENLKVEDVKDP-KPGPGEVLIRVKMAGVNPVDYNVINAVK-------VKPMPHIPGAEFAGVVEEV   69 (325)
T ss_pred             CeeEEeccCC---CCceEEEeccCC-CCCCCeEEEEEEEEEechHHHHHHhCCC-------CCCCCeecccceeEEEEEE
Confidence            6788886544   234777888887 7999999999999999999998876421       1234667999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |++++.|++||+|+..                            ..|+|++|++++.+.++++|++  +.+++.++..+.
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~  149 (325)
T cd08264          70 GDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAAL  149 (325)
T ss_pred             CCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhH
Confidence            9999999999999975                            3589999999999999999985  456778888999


Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      +||+++.....++|++|+|+|++|++|++++++|+.+|++|+++++    .+.++++|+++++++.+  ..+.+.... +
T Consensus       150 ~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~~~~l~~~~-~  222 (325)
T cd08264         150 TAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--VEEKVKEIT-K  222 (325)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--HHHHHHHHh-C
Confidence            9999997733399999999998899999999999999999998873    36677899988887654  233344444 6


Q ss_pred             ceeEEEECCChHHHHHHHHHhccCCEEEEEcCc
Q 018013          297 GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       297 g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ++|+|+|++|+..+..++++|+++|+|+.+|..
T Consensus       223 ~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~  255 (325)
T cd08264         223 MADVVINSLGSSFWDLSLSVLGRGGRLVTFGTL  255 (325)
T ss_pred             CCCEEEECCCHHHHHHHHHhhccCCEEEEEecC
Confidence            899999999999999999999999999999875

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.97  E-value=1e-29  Score=241.97  Aligned_cols=239  Identities=31%  Similarity=0.476  Sum_probs=198.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCC-CCCeEEEEEeEEeeChhhhhhhcCCccC---------CCCCCCCCCCCCCC
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPI-KPNHVLVKIIFAGVNASDVNFSSGRYFS---------DGNDIGSRLPFDAG  156 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~V~v~~~~i~~~D~~~~~g~~~~---------~~~~~~~~~p~~~G  156 (362)
                      ||+++++..+. +.+.+.+++.+.| .+ .++||+|++.++++|++|++...|....         .........|.++|
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~p-~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G   78 (350)
T cd08248           1 MKAWQIHSYGG-IDSLLLLENARIP-VIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLG   78 (350)
T ss_pred             CceEEecccCC-CcceeeecccCCC-CCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeec
Confidence            68888876653 2234778888888 66 5999999999999999999988774210         00000234578899


Q ss_pred             CceEEEEEEeCCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-C-
Q 018013          157 FEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-A-  228 (362)
Q Consensus       157 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~-  228 (362)
                      +|++|+|+++|+++++|++||+|++..    .|+|++|++++.+.++++|++  ...++.++.++.+||+++.+... + 
T Consensus        79 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  158 (350)
T cd08248          79 RDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNP  158 (350)
T ss_pred             ceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCC
Confidence            999999999999999999999999875    699999999999999999985  45677788899999999987776 4 


Q ss_pred             ---CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          229 ---SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ---~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                         +|++|+|+|++|++|++++++|+.+|++|+++.++ ++.+.++++|++++++....++.+.+..  .+++|++||++
T Consensus       159 ~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~--~~~vd~vi~~~  235 (350)
T cd08248         159 KNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTE--RGKFDVILDTV  235 (350)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHh--cCCCCEEEECC
Confidence               49999999999999999999999999999998865 5777888999999988876555544432  36799999999


Q ss_pred             ChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          306 GGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       306 g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      |+.....++++++++|+++.+|...
T Consensus       236 g~~~~~~~~~~l~~~G~~v~~g~~~  260 (350)
T cd08248         236 GGDTEKWALKLLKKGGTYVTLVSPL  260 (350)
T ss_pred             ChHHHHHHHHHhccCCEEEEecCCc
Confidence            9989999999999999999998654

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=6.7e-29  Score=231.79  Aligned_cols=222  Identities=38%  Similarity=0.565  Sum_probs=195.3

Q ss_pred             ceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEE
Q 018013          102 ATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI  181 (362)
Q Consensus       102 ~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  181 (362)
                      .+.+.+.+.+ .+.+++|+|+|.++++|+.|++...|.++       ..+|.++|+|++|+|+.+|+++++|++||+|++
T Consensus        13 ~~~~~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~~~~~-------~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~   84 (320)
T cd05286          13 VLEYEDVPVP-EPGPGEVLVRNTAIGVNFIDTYFRSGLYP-------LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAY   84 (320)
T ss_pred             ceEEeecCCC-CCCCCEEEEEEEEeecCHHHHHHhcCCCC-------CCCCccCCcceeEEEEEECCCCCCCCCCCEEEE
Confidence            3556666666 68999999999999999999998877653       234668999999999999999999999999999


Q ss_pred             ec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEE
Q 018013          182 MT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTV  257 (362)
Q Consensus       182 ~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~V  257 (362)
                      +. .|+|++|+.++.+.++++|++  ..++++++..+.+||+++..... ++|++|+|+|++|++|++++++|+.+|++|
T Consensus        85 ~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v  164 (320)
T cd05286          85 AGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATV  164 (320)
T ss_pred             ecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE
Confidence            87 899999999999999999985  45667788899999999988777 899999999999999999999999999999


Q ss_pred             EEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCccc
Q 018013          258 VATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       258 i~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +++++++++.+.++++|++++++....++.+.+.... ++++|+++||+++.....++++++++|+++.+|....
T Consensus       165 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~  239 (320)
T cd05286         165 IGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASG  239 (320)
T ss_pred             EEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCC
Confidence            9999999999999999999999887766666555543 5689999999999889999999999999999997654

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.97  E-value=3.3e-29  Score=238.09  Aligned_cols=242  Identities=24%  Similarity=0.315  Sum_probs=192.4

Q ss_pred             eEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEE-
Q 018013          103 TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI-  181 (362)
Q Consensus       103 ~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-  181 (362)
                      +.+++.+.| .+.++||+|+|.++++|+.|++...+.....   .....|.++|+|++|+|+++|+++++|++||+|++ 
T Consensus        10 ~~~~~~~~~-~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   85 (343)
T cd05285          10 LRLEERPIP-EPGPGEVLVRVRAVGICGSDVHYYKHGRIGD---FVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE   85 (343)
T ss_pred             eeEEECCCC-CCCCCeEEEEEEEeeEccccHHHHccCCCcc---cCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence            788888888 7899999999999999999998764321100   01235668999999999999999999999999986 


Q ss_pred             -----------------------e-----cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHHHHHHhCC-CCCC
Q 018013          182 -----------------------M-----TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIALEQAGP-ASGK  231 (362)
Q Consensus       182 -----------------------~-----~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~al~~~~~-~~g~  231 (362)
                                             +     ..|+|++|++++.+.++++|++ +...++...++.+||+++ .... ++|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~-~~~~~~~g~  164 (343)
T cd05285          86 PGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHAC-RRAGVRPGD  164 (343)
T ss_pred             cccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHH-HhcCCCCCC
Confidence                                   2     2589999999999999999986 333334446788999998 4455 9999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccH---HHHHHH-HCCCceeEEEECCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDI---KTVFKE-EFPKGFDIIYESVG  306 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~---~~~~~~-~~~~g~Dvvid~~g  306 (362)
                      +|+|+| +|++|++++|+|+.+|++ |+++++++++.++++++|+++++++++.++   .+.+.. ..++++|++|||.|
T Consensus       165 ~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  243 (343)
T cd05285         165 TVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTG  243 (343)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCC
Confidence            999986 699999999999999997 999999999999999999999999887653   444443 44567999999999


Q ss_pred             hH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          307 GD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       307 ~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +. .++.++++++++|+++.+|.......   +   ++    ..+..+++++.++
T Consensus       244 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~---~~----~~~~~~~~~~~~~  288 (343)
T cd05285         244 AESCIQTAIYATRPGGTVVLVGMGKPEVT---L---PL----SAASLREIDIRGV  288 (343)
T ss_pred             CHHHHHHHHHHhhcCCEEEEEccCCCCCc---c---CH----HHHhhCCcEEEEe
Confidence            75 88999999999999999997543211   1   11    1355677777665

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=7.5e-29  Score=232.18  Aligned_cols=236  Identities=31%  Similarity=0.460  Sum_probs=204.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++..+..  ..+.+++.+.| .+.+++|+|++.++++|++|+....|.+..     ....|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~~~-~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~v~~~   72 (325)
T cd08253           1 MRAIRYHEFGAP--DVLRLGDLPVP-TPGPGEVLVRVHASGVNPVDTYIRAGAYPG-----LPPLPYVPGSDGAGVVEAV   72 (325)
T ss_pred             CceEEEcccCCc--ccceeeecCCC-CCCCCEEEEEEEEEecChhHhhhccCCCCC-----CCCCCeecccceEEEEEee
Confidence            577777764422  34677888888 789999999999999999999988776532     2346778999999999999


Q ss_pred             CCCCCCCCCCCeEEEec------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEc
Q 018013          167 GDSVNNVKVGTPAAIMT------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTA  237 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~g  237 (362)
                      |+++++|++||+|+.+.      .|++++|+.++.+.++++|++  ..+++.++.++.+||+++..... ++|++++|+|
T Consensus        73 g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g  152 (325)
T cd08253          73 GEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHG  152 (325)
T ss_pred             CCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEc
Confidence            99999999999999986      789999999999999999985  45677888999999999988666 8999999999


Q ss_pred             CCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHH
Q 018013          238 AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKA  316 (362)
Q Consensus       238 a~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~  316 (362)
                      +++++|++++++++..|++|+++++++++.+.++++|++++++....++.+.+... .++++|+++||.++......+++
T Consensus       153 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (325)
T cd08253         153 GSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV  232 (325)
T ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHh
Confidence            99999999999999999999999999999999999999999988776666555554 45689999999999888899999


Q ss_pred             hccCCEEEEEcCcc
Q 018013          317 LAVYGRLIVIGMIS  330 (362)
Q Consensus       317 l~~~G~~v~~G~~~  330 (362)
                      ++++|+++.+|...
T Consensus       233 l~~~g~~v~~~~~~  246 (325)
T cd08253         233 LAPGGRIVVYGSGG  246 (325)
T ss_pred             hCCCCEEEEEeecC
Confidence            99999999998865

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05281 TDH Threonine dehydrogenase

Probab=99.97  E-value=7.7e-29  Score=235.40  Aligned_cols=234  Identities=29%  Similarity=0.425  Sum_probs=194.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+.    .+.+.+.+.| .+.++||+|++.++++|+.|+.+..+......   ....|..+|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~----~~~~~~~~~~-~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~---~~~~~~~~g~e~~G~V~~~   72 (341)
T cd05281           1 MKAIVKTKAGP----GAELVEVPVP-KPGPGEVLIKVLAASICGTDVHIYEWDEWAQS---RIKPPLIFGHEFAGEVVEV   72 (341)
T ss_pred             CcceEEecCCC----ceEEEeCCCC-CCCCCeEEEEEEEEEEcccchHHHcCCCCccc---cCCCCcccccceEEEEEEE
Confidence            67888886553    3778888888 78999999999999999999987654321100   1234667999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLT  217 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~t  217 (362)
                      |+++..+++||+|++.                            ..|+|++|++++.+.++++|++ +.+.++++.++.+
T Consensus        73 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~  152 (341)
T cd05281          73 GEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGN  152 (341)
T ss_pred             CCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHH
Confidence            9999999999999885                            3589999999999999999986 4466678888899


Q ss_pred             HHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CC
Q 018013          218 ASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FP  295 (362)
Q Consensus       218 A~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~  295 (362)
                      +|+++. ...++|++|+|+| +|++|++++|+|+..|+ +|++++++++|.+.++++|++++++++..++. .+.+. .+
T Consensus       153 a~~~~~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~  229 (341)
T cd05281         153 AVHTVL-AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDG  229 (341)
T ss_pred             HHHHHH-hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCC
Confidence            999876 3338899999987 69999999999999999 79999888899998899999999988776666 55444 45


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +++|++|||+|+ .....++++|+++|+++.+|....
T Consensus       230 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  266 (341)
T cd05281         230 TGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG  266 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC
Confidence            689999999985 678899999999999999987654

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=4.2e-29  Score=228.22  Aligned_cols=229  Identities=34%  Similarity=0.514  Sum_probs=197.0

Q ss_pred             eEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEec--------------
Q 018013          118 HVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT--------------  183 (362)
Q Consensus       118 eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--------------  183 (362)
                      ||+|+|.++++|+.|++...|.++.     ....|.++|+|++|+|+++|++++.|++||+|+++.              
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~   75 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPP-----PPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELC   75 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCc-----CCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhC
Confidence            6899999999999999998886541     234577899999999999999999999999999876              


Q ss_pred             ----------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHH
Q 018013          184 ----------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLA  250 (362)
Q Consensus       184 ----------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla  250 (362)
                                .|+|++|+.++.+.++++|++  ..+++.++.++.+||+++..... +++++|+|+|+++ +|+++++++
T Consensus        76 ~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a  154 (271)
T cd05188          76 PGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLA  154 (271)
T ss_pred             CCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHH
Confidence                      689999999999999999985  45666777999999999999888 9999999999766 999999999


Q ss_pred             HHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCc
Q 018013          251 KLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       251 ~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +..|.+|+++++++++.+.++++|.++++++.+.+..+.+....++++|+++|++++ ...+.++++++++|+++.+|..
T Consensus       155 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~  234 (271)
T cd05188         155 KAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGT  234 (271)
T ss_pred             HHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccC
Confidence            999999999999999999999999988888877666555444455789999999998 8899999999999999999987


Q ss_pred             ccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          330 SQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .......         .....+.|++++.|+.
T Consensus       235 ~~~~~~~---------~~~~~~~~~~~~~~~~  257 (271)
T cd05188         235 SGGPPLD---------DLRRLLFKELTIIGST  257 (271)
T ss_pred             CCCCCcc---------cHHHHHhcceEEEEee
Confidence            7543310         1235788999999975

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.97  E-value=6.9e-29  Score=235.93  Aligned_cols=251  Identities=22%  Similarity=0.272  Sum_probs=201.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.+.     .+.+++.+.|.+++++||+||+.++++|++|++...|.++       ...|.++|||++|+|+++
T Consensus         1 m~~~~~~~~~-----~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-------~~~~~~~g~e~~G~V~~v   68 (345)
T cd08287           1 MRATVIHGPG-----DIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-------TRAPAPIGHEFVGVVEEV   68 (345)
T ss_pred             CceeEEecCC-----ceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-------CCCCcccccceEEEEEEe
Confidence            6888887644     2788999999446999999999999999999988877653       234678999999999999


Q ss_pred             CCCCCCCCCCCeEEE-ec---------------------------CCCeeeEEEeeCC--CeeeCCCC-CHHHH------
Q 018013          167 GDSVNNVKVGTPAAI-MT---------------------------FGSYAEFTMVPSK--HILPVARP-DPEVV------  209 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~-~~---------------------------~g~~~~~~~v~~~--~~~~ip~~-~~~~a------  209 (362)
                      |++++.+++||+|++ ..                           +|+|++|+++|.+  .++++|++ ..+.+      
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~  148 (345)
T cd08287          69 GSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL  148 (345)
T ss_pred             CCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence            999999999999987 21                           2889999999975  89999986 22211      


Q ss_pred             HhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHH
Q 018013          210 AMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKT  288 (362)
Q Consensus       210 ~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~  288 (362)
                      ++...+.+||+++.....++|++|+|.| +|++|++++|+|+..|++ ++++++++++.+.++++|+++++++...++.+
T Consensus       149 ~l~~~~~~a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~  227 (345)
T cd08287         149 ALSDVMGTGHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVA  227 (345)
T ss_pred             hhhcHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHH
Confidence            2336788999998644338999999976 899999999999999995 88888888888888999999999998877766


Q ss_pred             HHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          289 VFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       289 ~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .+... .+.++|+++|++|+ ..++.++++++++|+|+.+|.... ..  .+.       ....+.+++++.|.
T Consensus       228 ~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~--~~~-------~~~~~~~~~~~~~~  291 (345)
T cd08287         228 RVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GV--ELD-------VRELFFRNVGLAGG  291 (345)
T ss_pred             HHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CC--ccC-------HHHHHhcceEEEEe
Confidence            66554 45689999999985 688999999999999999987652 11  111       11356788887764

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.1e-28  Score=232.93  Aligned_cols=258  Identities=32%  Similarity=0.436  Sum_probs=211.0

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |+++++...+..  ..+.+.+.+.| ++.+++|+|++.++++|.+|++...|.++.     ....|.++|||++|+|+.+
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~v~~~   72 (342)
T cd08266           1 MKAVVIRGHGGP--EVLEYGDLPEP-EPGPDEVLVRVKAAALNHLDLWVRRGMPGI-----KLPLPHILGSDGAGVVEAV   72 (342)
T ss_pred             CeEEEEecCCCc--cceeEeecCCC-CCCCCeEEEEEEeeecCHHHHHHhcCCCCC-----CCCCCeecccceEEEEEEe
Confidence            678888743322  34677777777 789999999999999999999988886532     1345678999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |++++.|++||+|++.                            ..|++++|+.++.+.++++|+.  ..+++.++..+.
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~  152 (342)
T cd08266          73 GPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL  152 (342)
T ss_pred             CCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence            9999999999999986                            3588999999999999999985  456777788899


Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-C
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-F  294 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~  294 (362)
                      +||+++.+... +++++++|+|+++++|++++++++..|++|+++++++++.+.+++.+.+.+++..+.+..+.+... .
T Consensus       153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T cd08266         153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTG  232 (342)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhC
Confidence            99999877776 899999999998999999999999999999999999999999988888888887765555544443 4


Q ss_pred             CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          295 PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       295 ~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++|+++|++|...+...+++++++|+++.+|........  .   +    ....+.+++++.+++
T Consensus       233 ~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~--~---~----~~~~~~~~~~~~~~~  290 (342)
T cd08266         233 KRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAP--I---D----LRHVFWRQLSILGST  290 (342)
T ss_pred             CCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCC--c---C----HHHHhhcceEEEEEe
Confidence            56899999999998899999999999999999987653221  1   1    113456777777764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.97  E-value=1e-28  Score=236.71  Aligned_cols=256  Identities=23%  Similarity=0.298  Sum_probs=197.0

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      .+++.++..+.     .+.+++.+.| ++.++||+||+.++++|++|+++..|......   ...+|.++|+|++|+|++
T Consensus        17 ~~~~~~~~~~~-----~l~~~~~~~p-~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~---~~~~p~~~G~e~~G~V~~   87 (364)
T PLN02702         17 ENMAAWLVGVN-----TLKIQPFKLP-PLGPHDVRVRMKAVGICGSDVHYLKTMRCADF---VVKEPMVIGHECAGIIEE   87 (364)
T ss_pred             ccceEEEecCC-----ceEEEeccCC-CCCCCeEEEEEEEEEEchhhhHHHcCCCCccc---cCCCCcccccceeEEEEE
Confidence            34445554332     3777888888 78999999999999999999998876321110   123577899999999999


Q ss_pred             eCCCCCCCCCCCeEEEe-------------------------c----CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhH
Q 018013          166 VGDSVNNVKVGTPAAIM-------------------------T----FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSG  215 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~-------------------------~----~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~  215 (362)
                      +|+++++|++||+|++.                         .    +|+|++|++++.+.++++|++ ..+.+++..++
T Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (364)
T PLN02702         88 VGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPL  167 (364)
T ss_pred             ECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHH
Confidence            99999999999999862                         1    589999999999999999986 33444443556


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCC--CccHHHHHHH
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYK--AEDIKTVFKE  292 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~--~~~~~~~~~~  292 (362)
                      .++|+++.....+++++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++++|+++++++.  ..++.+.+..
T Consensus       168 ~~a~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  246 (364)
T PLN02702        168 SVGVHACRRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEE  246 (364)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHH
Confidence            6688888433338999999996 799999999999999995 77788888888988999999887653  3455554433


Q ss_pred             ---HCCCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          293 ---EFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       293 ---~~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                         ..++++|++|||+| ...+..++++++++|+|+.+|......   .+       ....+..+++++.|++
T Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~-------~~~~~~~~~~~i~~~~  309 (364)
T PLN02702        247 IQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEM---TV-------PLTPAAAREVDVVGVF  309 (364)
T ss_pred             HhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCC---cc-------cHHHHHhCccEEEEec
Confidence               23567999999999 578999999999999999999764311   01       1224678888888864

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=1.3e-28  Score=232.48  Aligned_cols=225  Identities=24%  Similarity=0.389  Sum_probs=193.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++..+....+.+.+++.+.| .+.++||+|++.++++|++|++...|.++.      ...|.++|+|++|+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ev~irv~~~~i~~~d~~~~~g~~~~------~~~~~~~g~e~~G~V~~v   73 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVP-EPGPGEVLIKVEACGVCRTDLHIVEGDLPP------PKLPLIPGHEIVGRVEAV   73 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCC-CCCCCEEEEEEEEEeccHHHHHHHhCCCCC------CCCCccccccccEEEEEE
Confidence            6888888766433345777888887 689999999999999999999988886542      345778999999999999


Q ss_pred             CCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |+++.+|++||+|...                             .+|+|++|+.++...++++|++  ..++++++.++
T Consensus        74 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~  153 (329)
T cd08298          74 GPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAG  153 (329)
T ss_pred             CCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhh
Confidence            9999999999999762                             2589999999999999999985  56777899999


Q ss_pred             HHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      .+||+++ .... +++++|+|+| +|++|++++++|+..|++|+++++++++.+.++++|++.+++.+..         .
T Consensus       154 ~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---------~  222 (329)
T cd08298         154 IIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL---------P  222 (329)
T ss_pred             HHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc---------C
Confidence            9999999 5555 9999999997 7999999999999999999999999999999999999888876542         2


Q ss_pred             CCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCc
Q 018013          295 PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       295 ~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ++++|+++++.+ +..++.++++++++|+|+.+|..
T Consensus       223 ~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~  258 (329)
T cd08298         223 PEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIH  258 (329)
T ss_pred             CCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCC
Confidence            457999999865 57889999999999999999853

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.6e-28  Score=230.43  Aligned_cols=234  Identities=30%  Similarity=0.479  Sum_probs=201.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+..  ..+.+++.+.| ++.+++|+|++.++++|++|+....|.+..     ....|.++|+|++|+|+.+
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-----~~~~~~~~g~e~~G~v~~~   72 (326)
T cd08272           1 MKALVLESFGGP--EVFELREVPRP-QPGPGQVLVRVHASGVNPLDTKIRRGGAAA-----RPPLPAILGCDVAGVVEAV   72 (326)
T ss_pred             CeEEEEccCCCc--hheEEeecCCC-CCCCCeEEEEEEEEecCHHHHHHhCCCCCC-----CCCCCcccccceeEEEEEe
Confidence            689999866532  24677777777 789999999999999999999988776532     1234678999999999999


Q ss_pred             CCCCCCCCCCCeEEEec------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEc
Q 018013          167 GDSVNNVKVGTPAAIMT------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTA  237 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~g  237 (362)
                      |+++..|++||+|+++.      .|+|++|+.++.+.++++|+.  ...++.++..+.+||+++.+... ++|++++|+|
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g  152 (326)
T cd08272          73 GEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHG  152 (326)
T ss_pred             CCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            99999999999999986      789999999999999999985  45677788899999999877777 9999999999


Q ss_pred             CCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHH
Q 018013          238 AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKA  316 (362)
Q Consensus       238 a~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~  316 (362)
                      ++|++|++++++|+..|++|++++++ ++.+.++++|++.+++.... +.+.+.... ++++|+++||+++.....++++
T Consensus       153 ~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~  230 (326)
T cd08272         153 GAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEA  230 (326)
T ss_pred             CCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHH
Confidence            99999999999999999999999988 88899999999888887766 666665554 4689999999999888899999


Q ss_pred             hccCCEEEEEcCcc
Q 018013          317 LAVYGRLIVIGMIS  330 (362)
Q Consensus       317 l~~~G~~v~~G~~~  330 (362)
                      ++++|+++.+|...
T Consensus       231 l~~~g~~v~~~~~~  244 (326)
T cd08272         231 VALYGRVVSILGGA  244 (326)
T ss_pred             hccCCEEEEEecCC
Confidence            99999999998764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=2.3e-29  Score=236.73  Aligned_cols=231  Identities=31%  Similarity=0.469  Sum_probs=193.7

Q ss_pred             CceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCc---eEEEEEEeC-CCCCCCCCC
Q 018013          101 DATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFE---AVGLIAAVG-DSVNNVKVG  176 (362)
Q Consensus       101 ~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e---~~G~V~~vG-~~v~~~~~G  176 (362)
                      .....++.++| .+.+++++|++.++++|+.|+.+..|.+....  ....+|.+.+.+   .+|.+...| ..+..+..|
T Consensus        18 ~~~~~~~~~iP-~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~--~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g   94 (347)
T KOG1198|consen   18 EVLFSEEVPIP-EPEDGEVLIKVVAVALNPIDLKIRNGYYSPIP--LGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHG   94 (347)
T ss_pred             ceEEeecccCC-CCCCCceEEEEEEeccChHHHHHHccCcCCCC--CccCCCCccccccCCceeEEeccccccccceEee
Confidence            45677788889 99999999999999999999999999876433  234567444444   445555556 344567777


Q ss_pred             CeEEEe-cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhC------C-CCCCEEEEEcCCchHHHHH
Q 018013          177 TPAAIM-TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAG------P-ASGKKVLVTAAAGGTGQFA  246 (362)
Q Consensus       177 d~V~~~-~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~------~-~~g~~VlI~ga~g~vG~~a  246 (362)
                      |.+... ..|+|+||.++|...++++|++  +.++|+++.+++|||.+|....      . ++|++|||+||+||+|+++
T Consensus        95 ~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~a  174 (347)
T KOG1198|consen   95 DAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAA  174 (347)
T ss_pred             eEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHH
Confidence            766654 4699999999999999999985  7888899999999999999999      6 9999999999999999999


Q ss_pred             HHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEE
Q 018013          247 VQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       247 iqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~  326 (362)
                      +|+|++.|+..+++++++++.++++++|+++++||++.++.+.+...++.++|+||||+|+........++...|+...+
T Consensus       175 iQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i  254 (347)
T KOG1198|consen  175 IQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYI  254 (347)
T ss_pred             HHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEE
Confidence            99999999766666667899999999999999999999988888877788999999999998888999999999987777


Q ss_pred             cCcccccC
Q 018013          327 GMISQYQG  334 (362)
Q Consensus       327 G~~~~~~~  334 (362)
                      +..+....
T Consensus       255 ~~~~~~~~  262 (347)
T KOG1198|consen  255 GLVGDELA  262 (347)
T ss_pred             Eecccccc
Confidence            77665444

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.97  E-value=1.3e-28  Score=233.69  Aligned_cols=245  Identities=27%  Similarity=0.408  Sum_probs=197.7

Q ss_pred             ceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEE
Q 018013          102 ATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI  181 (362)
Q Consensus       102 ~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  181 (362)
                      .+++++.+.| .++++||+|++.++++|+.|+.++.+.....   ....+|.++|+|++|+|+++|+++++|++||+|++
T Consensus        10 ~~~l~~~~~p-~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   85 (340)
T TIGR00692        10 GAELTEVPVP-EPGPGEVLIKVLATSICGTDVHIYNWDEWAQ---SRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSV   85 (340)
T ss_pred             CcEEEECCCC-CCCCCeEEEEEEEEEEcccCHHHHcCCCCCC---CCCCCCcccccceEEEEEEECCCCCcCCCCCEEEE
Confidence            4778888988 6899999999999999999998876542111   12245667999999999999999999999999987


Q ss_pred             ---------------------------e-cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHHHHHHhCCCCCCE
Q 018013          182 ---------------------------M-TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIALEQAGPASGKK  232 (362)
Q Consensus       182 ---------------------------~-~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~al~~~~~~~g~~  232 (362)
                                                 + ..|+|++|++++++.++++|++ ..+.++++.++.+||+++. ...++|++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~~-~~~~~g~~  164 (340)
T TIGR00692        86 ETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL-AGPISGKS  164 (340)
T ss_pred             CCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHHH-ccCCCCCE
Confidence                                       2 4589999999999999999985 4466678888999999872 22378999


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCCh-HH
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGG-DM  309 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~-~~  309 (362)
                      |+|+| +|++|++++|+|+.+|++ |+++.+++++.+.++++|++.++++...++.+.+... .++++|++|||+|+ ..
T Consensus       165 vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~  243 (340)
T TIGR00692       165 VLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKA  243 (340)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHH
Confidence            99976 699999999999999996 9999888889998999999999988877777666554 45789999999885 67


Q ss_pred             HHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          310 FNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       310 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +..++++|+++|+|+.+|.......   .   ++   ...++.+++++.++.
T Consensus       244 ~~~~~~~l~~~g~~v~~g~~~~~~~---~---~~---~~~~~~~~~~~~~~~  286 (340)
T TIGR00692       244 LEQGLQAVTPGGRVSLLGLPPGKVT---I---DF---TNKVIFKGLTIYGIT  286 (340)
T ss_pred             HHHHHHhhcCCCEEEEEccCCCCcc---c---ch---hhhhhhcceEEEEEe
Confidence            8899999999999999998642111   1   11   113567777777653

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.4e-28  Score=231.35  Aligned_cols=237  Identities=24%  Similarity=0.315  Sum_probs=190.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++..++     .+.+++.+.| ++.++||+|++.++++|++|++...|.++         .|.++|+|++|+|+++
T Consensus         1 ~~a~~~~~~~-----~~~~~~~~~p-~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---------~~~~~G~e~~G~Vv~~   65 (319)
T cd08242           1 MKALVLDGGL-----DLRVEDLPKP-EPPPGEALVRVLLAGICNTDLEIYKGYYP---------FPGVPGHEFVGIVEEG   65 (319)
T ss_pred             CeeEEEeCCC-----cEEEEECCCC-CCCCCeEEEEEEEEEEccccHHHHcCCCC---------CCCccCceEEEEEEEe
Confidence            6888887643     3889999999 89999999999999999999998887542         4668999999999999


Q ss_pred             CCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~  216 (362)
                      |++   +++||+|...                             ..|+|++|++++.+.++++|++ +.+.++...++.
T Consensus        66 G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~  142 (319)
T cd08242          66 PEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLA  142 (319)
T ss_pred             CCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHH
Confidence            998   6799999631                             2589999999999999999986 333443334555


Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ++|.++.....+++++|+|+| +|++|++++|+|+.+|++|++++.++++.+.++++|++.++++...        ..++
T Consensus       143 ~~~~~~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~  213 (319)
T cd08242         143 AALEILEQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE--------SEGG  213 (319)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc--------ccCC
Confidence            666655433339999999997 7999999999999999999999999999999999999988876432        3456


Q ss_pred             ceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          297 GFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       297 g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++|++|||.|+ ..+..++++++++|+++..|.......      .+    +..+..|++++.|.
T Consensus       214 ~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~------~~----~~~~~~~~~~i~~~  268 (319)
T cd08242         214 GFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPAS------FD----LTKAVVNEITLVGS  268 (319)
T ss_pred             CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCc------cC----HHHheecceEEEEE
Confidence            79999999986 678899999999999998776543211      11    22466788888876

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=4.4e-28  Score=227.16  Aligned_cols=258  Identities=33%  Similarity=0.475  Sum_probs=210.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |+++.++..+..  ..+.+++.+.+ ++++++|+|++.++++|+.|+....+.+..     ...+|.++|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~~~-~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~-----~~~~~~~~g~e~~G~v~~v   72 (325)
T TIGR02824         1 MKAIEITEPGGP--EVLVLVEVPLP-VPKAGEVLIRVAAAGVNRPDLLQRAGKYPP-----PPGASDILGLEVAGEVVAV   72 (325)
T ss_pred             CceEEEccCCCc--ccceEEeCCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCC-----CCCCCCCccceeEEEEEEe
Confidence            567777654422  34566676666 789999999999999999999887765432     1234678999999999999


Q ss_pred             CCCCCCCCCCCeEEEecC-CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchH
Q 018013          167 GDSVNNVKVGTPAAIMTF-GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGT  242 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~~-g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~v  242 (362)
                      |+++..+++||+|+++.. |+|++|+.++...++++|++  ...+++++.++.+||+++..... +++++++|+|++|++
T Consensus        73 g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~  152 (325)
T TIGR02824        73 GEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGI  152 (325)
T ss_pred             CCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchH
Confidence            999999999999999854 99999999999999999985  45677888999999999877777 999999999999999


Q ss_pred             HHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCC
Q 018013          243 GQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYG  321 (362)
Q Consensus       243 G~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G  321 (362)
                      |++++++++..|++|+++++++++.+.++++|++.+++....++...+... .++++|+++||+|+..+..++++++++|
T Consensus       153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g  232 (325)
T TIGR02824       153 GTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDG  232 (325)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCc
Confidence            999999999999999999999999998888999888887766665555544 3467999999999988899999999999


Q ss_pred             EEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          322 RLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       322 ~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++.+|..+.....  ..       ...++.|++++.|+.
T Consensus       233 ~~v~~g~~~~~~~~--~~-------~~~~~~~~~~~~~~~  263 (325)
T TIGR02824       233 RIVQIGFQGGRKAE--LD-------LGPLLAKRLTITGST  263 (325)
T ss_pred             EEEEEecCCCCcCC--CC-------hHHHHhcCCEEEEEe
Confidence            99999986532221  11       123457888888763

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.97  E-value=1.8e-28  Score=232.58  Aligned_cols=241  Identities=24%  Similarity=0.370  Sum_probs=192.6

Q ss_pred             ceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhc-CCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEE
Q 018013          102 ATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSS-GRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAA  180 (362)
Q Consensus       102 ~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~-g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  180 (362)
                      .+.+++.+.| +++++||+||+.++++|++|++... |.+..    .....|.++|+|++|+|+++|++|++|++||+|+
T Consensus         8 ~~~~~~~~~p-~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~----~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~   82 (339)
T cd08232           8 DLRVEERPAP-EPGPGEVRVRVAAGGICGSDLHYYQHGGFGT----VRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVA   82 (339)
T ss_pred             ceEEEEcCCC-CCCCCEEEEEEEEEEECcccHHHHcCCCCCc----ccccCCeecCccceEEEEeeCCCCCcCCCCCEEE
Confidence            4788899999 7999999999999999999998763 32211    0124567899999999999999999999999998


Q ss_pred             Ee---------------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHHHHHHhC
Q 018013          181 IM---------------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIALEQAG  226 (362)
Q Consensus       181 ~~---------------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~al~~~~  226 (362)
                      +.                                 .+|+|++|++++.+.++++|++ ..+.++++.++++||+++....
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~  162 (339)
T cd08232          83 VNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAG  162 (339)
T ss_pred             EccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhcC
Confidence            62                                 2589999999999999999985 4444455688899999998776


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      ..++++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++++|+++++++.+.++....  ...+++|+++||.
T Consensus       163 ~~~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~--~~~~~vd~vld~~  239 (339)
T cd08232         163 DLAGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYA--ADKGDFDVVFEAS  239 (339)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhh--ccCCCccEEEECC
Confidence            67899999977 79999999999999999 89999999999998899999999988765432211  1235699999999


Q ss_pred             Ch-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          306 GG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       306 g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      |+ ..++..+++|+++|+|+.+|..+...     . .+    ...++.|++++.|+
T Consensus       240 g~~~~~~~~~~~L~~~G~~v~~g~~~~~~-----~-~~----~~~~~~~~~~~~~~  285 (339)
T cd08232         240 GAPAALASALRVVRPGGTVVQVGMLGGPV-----P-LP----LNALVAKELDLRGS  285 (339)
T ss_pred             CCHHHHHHHHHHHhcCCEEEEEecCCCCc-----c-Cc----HHHHhhcceEEEEE
Confidence            95 67899999999999999998655111     0 11    11245677777765

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=2e-28  Score=231.05  Aligned_cols=233  Identities=32%  Similarity=0.502  Sum_probs=198.1

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG  167 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG  167 (362)
                      |++.++..+..  ..+++++.+.| .+.++||+|++.++++|+.|+.+..|.++..     ..+|.++|+|++|+|+.+|
T Consensus         2 ~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-----~~~~~~~g~e~~G~v~~vG   73 (331)
T cd08273           2 REVVVTRRGGP--EVLKVVEADLP-EPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-----PPLPFTPGYDLVGRVDALG   73 (331)
T ss_pred             eeEEEccCCCc--ccEEEeccCCC-CCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-----CCCCcccccceEEEEEEeC
Confidence            67777765533  34788888888 7899999999999999999999888765321     2457789999999999999


Q ss_pred             CCCCCCCCCCeEEEecC-CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHH
Q 018013          168 DSVNNVKVGTPAAIMTF-GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTG  243 (362)
Q Consensus       168 ~~v~~~~~Gd~V~~~~~-g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG  243 (362)
                      ++++.|++||+|.++.. |+|++|+.++.+.++++|++  ..+++.++.++.+||+++.+... ++|++|+|+|++|++|
T Consensus        74 ~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig  153 (331)
T cd08273          74 SGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVG  153 (331)
T ss_pred             CCCccCCCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH
Confidence            99999999999999875 99999999999999999985  45667889999999999988766 8999999999999999


Q ss_pred             HHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEE
Q 018013          244 QFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRL  323 (362)
Q Consensus       244 ~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~  323 (362)
                      ++++++|+..|++|++++. +++.+.++++|+.. ++....++...  ...++++|+++||+++..+..++++++++|++
T Consensus       154 ~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~  229 (331)
T cd08273         154 QALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPA--MLTPGGVDVVFDGVGGESYEESYAALAPGGTL  229 (331)
T ss_pred             HHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhh--hccCCCceEEEECCchHHHHHHHHHhcCCCEE
Confidence            9999999999999999998 88888888899754 45554444333  23446899999999998899999999999999


Q ss_pred             EEEcCcccc
Q 018013          324 IVIGMISQY  332 (362)
Q Consensus       324 v~~G~~~~~  332 (362)
                      +.+|.....
T Consensus       230 v~~g~~~~~  238 (331)
T cd08273         230 VCYGGNSSL  238 (331)
T ss_pred             EEEccCCCC
Confidence            999987654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=8.3e-28  Score=225.55  Aligned_cols=237  Identities=31%  Similarity=0.459  Sum_probs=202.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++..+..  ..+.+++.+.| .+++++|+|++.++++|+.|+....|.+...     ...|.++|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-----~~~~~~~g~e~~G~v~~~   72 (328)
T cd08268           1 MRAVRFHQFGGP--EVLRIEELPVP-APGAGEVLIRVEAIGLNRADAMFRRGAYIEP-----PPLPARLGYEAAGVVEAV   72 (328)
T ss_pred             CeEEEEeccCCc--ceeEEeecCCC-CCCCCeEEEEEEEEecChHHhheeccccCCC-----CCCCCCCCcceEEEEEee
Confidence            577888754422  34667777777 7899999999999999999998877765321     234678999999999999


Q ss_pred             CCCCCCCCCCCeEEEecC------CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEc
Q 018013          167 GDSVNNVKVGTPAAIMTF------GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTA  237 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~~------g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~g  237 (362)
                      |+++..|++||+|.++..      |++++|+.++.+.++++|++  ..++++++.++.+||+++..... +++++++|+|
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g  152 (328)
T cd08268          73 GAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITA  152 (328)
T ss_pred             CCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEec
Confidence            999999999999998753      89999999999999999985  45677888999999999987777 8899999999


Q ss_pred             CCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHH
Q 018013          238 AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKA  316 (362)
Q Consensus       238 a~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~  316 (362)
                      ++|++|++++++++..|++++.++.+.++.+.++++|++.+++....++.+.+... .+.++|+++++.++.....++++
T Consensus       153 ~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (328)
T cd08268         153 ASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA  232 (328)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHh
Confidence            99999999999999999999999999999999988999888888776665555444 44689999999999888999999


Q ss_pred             hccCCEEEEEcCccc
Q 018013          317 LAVYGRLIVIGMISQ  331 (362)
Q Consensus       317 l~~~G~~v~~G~~~~  331 (362)
                      ++++|+++.+|..+.
T Consensus       233 l~~~g~~v~~g~~~~  247 (328)
T cd08268         233 LAPGGTLVVYGALSG  247 (328)
T ss_pred             hccCCEEEEEEeCCC
Confidence            999999999987654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.97  E-value=5.2e-28  Score=228.45  Aligned_cols=248  Identities=29%  Similarity=0.411  Sum_probs=202.4

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG  167 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG  167 (362)
                      |++++.+.+.    .+.+++.+.| .+.+++|+|++.++++|++|++...|.++      ...+|.++|+|++|+|+++|
T Consensus         1 ~~~~~~~~~~----~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~------~~~~p~~~g~e~~G~v~~~g   69 (330)
T cd08245           1 KAAVVHAAGG----PLEPEEVPVP-EPGPGEVLIKIEACGVCHTDLHAAEGDWG------GSKYPLVPGHEIVGEVVEVG   69 (330)
T ss_pred             CeEEEecCCC----CceEEeccCC-CCCCCeEEEEEEEEeccHHHHHHHcCCCC------CCCCCcccCccceEEEEEEC
Confidence            5677876653    3788899998 68999999999999999999999888653      23457789999999999999


Q ss_pred             CCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          168 DSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       168 ~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      +++++|++||+|+..                             ..|+|++|+.+|.+.++++|++  +.+++.++..+.
T Consensus        70 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~  149 (330)
T cd08245          70 AGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGI  149 (330)
T ss_pred             CCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHH
Confidence            999999999999832                             2589999999999999999985  456677888999


Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      +||+++.....+++++|+|+| +|++|++++++|+..|++|+++++++++.+.++++|++.+++....+....    ..+
T Consensus       150 ta~~~l~~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~  224 (330)
T cd08245         150 TVYSALRDAGPRPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA----AAG  224 (330)
T ss_pred             HHHHHHHhhCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh----ccC
Confidence            999999774449999999996 688999999999999999999999999999999999988887765443322    235


Q ss_pred             ceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          297 GFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       297 g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++|+++||++ ......++++++++|+++.+|.........         ....++.+++++.|+
T Consensus       225 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~---------~~~~~~~~~~~~~~~  280 (330)
T cd08245         225 GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSP---------DIFPLIMKRQSIAGS  280 (330)
T ss_pred             CCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCcccc---------chHHHHhCCCEEEEe
Confidence            7999999977 478899999999999999998754321110         112366777777664

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=7.9e-28  Score=225.90  Aligned_cols=235  Identities=32%  Similarity=0.440  Sum_probs=201.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||++++.+++.  .+.+.+++.+.| ++.+++|+|++.++++|++|+....+.+..      ...|.++|+|++|+|+.+
T Consensus         1 ~~a~~~~~~~~--~~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~------~~~~~~~g~e~~G~v~~~   71 (325)
T cd08271           1 MKAWVLPKPGA--ALQLTLEEIEIP-GPGAGEVLVKVHAAGLNPVDWKVIAWGPPA------WSYPHVPGVDGAGVVVAV   71 (325)
T ss_pred             CeeEEEccCCC--cceeEEeccCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCC------CCCCcccccceEEEEEEe
Confidence            78888887663  335888999998 799999999999999999999887765421      123567999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCC
Q 018013          167 GDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAA  239 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~  239 (362)
                      |++++.+++||+|.+..    .|+|++|+.++.+.++++|++  ..+++.++..+.+||+++.+... ++|++|+|+|++
T Consensus        72 G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~  151 (325)
T cd08271          72 GAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGA  151 (325)
T ss_pred             CCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCc
Confidence            99999999999999984    799999999999999999985  45667788999999999988777 899999999988


Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhc
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALA  318 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~  318 (362)
                      +++|++++++++..|++|+++. ++++.+.++++|++.+++....++...+... .++++|++++|+++.....++++++
T Consensus       152 ~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~  230 (325)
T cd08271         152 GGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLA  230 (325)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhc
Confidence            9999999999999999999887 6778888888999999988776666655554 4568999999999877788999999


Q ss_pred             cCCEEEEEcCccc
Q 018013          319 VYGRLIVIGMISQ  331 (362)
Q Consensus       319 ~~G~~v~~G~~~~  331 (362)
                      ++|+|+.+|....
T Consensus       231 ~~G~~v~~~~~~~  243 (325)
T cd08271         231 FNGHLVCIQGRPD  243 (325)
T ss_pred             cCCEEEEEcCCCC
Confidence            9999999976543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=7e-28  Score=229.74  Aligned_cols=230  Identities=30%  Similarity=0.385  Sum_probs=187.0

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCC--CCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLP--IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~--~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      ++++++..+..    +.+++++.|.+  +.+++|+|++.++++|++|+....+....     ....|.++|+|++|+|++
T Consensus         2 ~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~-----~~~~~~~~g~e~~G~V~~   72 (352)
T cd08247           2 KALTFKNNTSP----LTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH-----FKVKEKGLGRDYSGVIVK   72 (352)
T ss_pred             ceEEEecCCCc----ceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc-----cccCCCccCceeEEEEEE
Confidence            57778766643    44555555533  59999999999999999999877542211     112366899999999999


Q ss_pred             eCCCCC-CCCCCCeEEEec------CCCeeeEEEeeCC----CeeeCCCC--CHHHHHhhhhHHHHHHHHHHhC-C-CCC
Q 018013          166 VGDSVN-NVKVGTPAAIMT------FGSYAEFTMVPSK----HILPVARP--DPEVVAMLTSGLTASIALEQAG-P-ASG  230 (362)
Q Consensus       166 vG~~v~-~~~~Gd~V~~~~------~g~~~~~~~v~~~----~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~-~-~~g  230 (362)
                      +|++++ .|++||+|+++.      .|+|++|++++..    .++++|++  +.+++.++..+.|||+++.... . ++|
T Consensus        73 vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g  152 (352)
T cd08247          73 VGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPD  152 (352)
T ss_pred             eCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCC
Confidence            999998 899999999875      6899999999998    78999984  5677788889999999998887 5 999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CC-EEEEecCCHhHHHHHHHcCCcEEEeCCCcc----HHHHHHHHC-CCceeEEEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLA-GN-TVVATCGGEHKAQLLKELGVDRVINYKAED----IKTVFKEEF-PKGFDIIYE  303 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~-G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~----~~~~~~~~~-~~g~Dvvid  303 (362)
                      ++|+|+|+++++|++++|+|+.. |. .|+++.+ +++.+.++++|+++++++.+.+    +.+.++... ++++|++||
T Consensus       153 ~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~  231 (352)
T cd08247         153 SKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILD  231 (352)
T ss_pred             CeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEE
Confidence            99999999999999999999987 45 6777765 5556677899999999877644    445555555 678999999


Q ss_pred             CCCh-HHHHHHHHHhc---cCCEEEEEc
Q 018013          304 SVGG-DMFNLCLKALA---VYGRLIVIG  327 (362)
Q Consensus       304 ~~g~-~~~~~~~~~l~---~~G~~v~~G  327 (362)
                      |+|+ .....++++++   ++|+||.++
T Consensus       232 ~~g~~~~~~~~~~~l~~~~~~G~~v~~~  259 (352)
T cd08247         232 CVGGYDLFPHINSILKPKSKNGHYVTIV  259 (352)
T ss_pred             CCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence            9998 68889999999   999999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=6e-28  Score=224.16  Aligned_cols=215  Identities=33%  Similarity=0.481  Sum_probs=189.4

Q ss_pred             CCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEecC---CC
Q 018013          110 LRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF---GS  186 (362)
Q Consensus       110 ~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---g~  186 (362)
                      .| ++.+++|+|++.++++|+.|++...|.++.     ...+|.++|+|++|+|+++|+++++|++||+|+++..   |+
T Consensus         2 ~p-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-----~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~   75 (303)
T cd08251           2 VA-PPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-----MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGG   75 (303)
T ss_pred             CC-CCCCCEEEEEEEEeecChHHHHHHCCCCCC-----CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcc
Confidence            35 688999999999999999999998886542     2346788999999999999999999999999998765   99


Q ss_pred             eeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          187 YAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       187 ~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      |++|++++.+.++++|++  ..++++++..+.+||+++.....++|++|+|+++++++|++++|+++.+|++|+++++++
T Consensus        76 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~  155 (303)
T cd08251          76 HATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSD  155 (303)
T ss_pred             eeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            999999999999999985  456778889999999999643339999999999999999999999999999999999999


Q ss_pred             hHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          265 HKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       265 ~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ++.+.++++|++.+++....++...+... .++++|+++|++++.....++++++++|+|+.+|..+
T Consensus       156 ~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~  222 (303)
T cd08251         156 DKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTA  222 (303)
T ss_pred             HHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccC
Confidence            99999999999999988876766655554 4568999999999888999999999999999998764

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.96  E-value=7.1e-28  Score=224.13  Aligned_cols=235  Identities=34%  Similarity=0.497  Sum_probs=198.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |++++++..+..  ..+.+++.+.| +++++||+|++.++++|+.|+....|.+..+.   ....|..+|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~---~~~~~~~~g~e~~G~v~~~   74 (309)
T cd05289           1 MKAVRIHEYGGP--EVLELADVPTP-EPGPGEVLVKVHAAGVNPVDLKIREGLLKAAF---PLTLPLIPGHDVAGVVVAV   74 (309)
T ss_pred             CceEEEcccCCc--cceeecccCCC-CCCCCeEEEEEEEeeCCHHHHHHhcCCccccC---CCCCCCccccceeEEEEee
Confidence            678888765432  23556677777 78999999999999999999998877643111   2345778999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCC
Q 018013          167 GDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAA  239 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~  239 (362)
                      |++++.+++||+|+++.    .|+|++|+.++...++++|++  ...++.++..+.+||+++..... +++++|+|+|++
T Consensus        75 G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~  154 (309)
T cd05289          75 GPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAA  154 (309)
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCC
Confidence            99999999999999987    799999999999999999985  45666778899999999988886 899999999988


Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhcc
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV  319 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~  319 (362)
                      |++|++++++++..|++|++++.++ +.+.++++|++++++....++.+   ...++++|+++||+++.....+++++++
T Consensus       155 g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~d~v~~~~~~~~~~~~~~~l~~  230 (309)
T cd05289         155 GGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER---AAAPGGVDAVLDTVGGETLARSLALVKP  230 (309)
T ss_pred             chHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh---ccCCCCceEEEECCchHHHHHHHHHHhc
Confidence            9999999999999999999998877 88888889988888877655443   3445679999999999999999999999


Q ss_pred             CCEEEEEcCccc
Q 018013          320 YGRLIVIGMISQ  331 (362)
Q Consensus       320 ~G~~v~~G~~~~  331 (362)
                      +|+|+.+|....
T Consensus       231 ~g~~v~~g~~~~  242 (309)
T cd05289         231 GGRLVSIAGPPP  242 (309)
T ss_pred             CcEEEEEcCCCc
Confidence            999999987544

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.96  E-value=3.2e-28  Score=225.01  Aligned_cols=198  Identities=25%  Similarity=0.320  Sum_probs=163.1

Q ss_pred             CCCCceEEEEEEeCCCCC------CCCCCCeEEEec-----------------------------------CCCeeeEEE
Q 018013          154 DAGFEAVGLIAAVGDSVN------NVKVGTPAAIMT-----------------------------------FGSYAEFTM  192 (362)
Q Consensus       154 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~-----------------------------------~g~~~~~~~  192 (362)
                      ++|||++|+|+++|++|+      +|++||||++.+                                   +|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999999      899999997521                                   389999999


Q ss_pred             eeCC-CeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHH
Q 018013          193 VPSK-HILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQ  268 (362)
Q Consensus       193 v~~~-~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~  268 (362)
                      +|++ .++++|++  +..+++++..+.|||+++......+|++|+|+| +|++|++++|+|+.+|++ |++++.+++|.+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            9998 69999985  456667778889999999877668999999998 599999999999999996 999998999999


Q ss_pred             HHHHcCCcEEEeCCCccHHHHHHH-HCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhH
Q 018013          269 LLKELGVDRVINYKAEDIKTVFKE-EFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGL  346 (362)
Q Consensus       269 ~l~~~g~~~v~~~~~~~~~~~~~~-~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~  346 (362)
                      .++++|+++++++.+.  .+.+.+ +.++++|++||++|. ..++.++++++++|+++.+|....... ..+       .
T Consensus       160 ~a~~~Ga~~~i~~~~~--~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~-~~i-------~  229 (280)
T TIGR03366       160 LALSFGATALAEPEVL--AERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGP-VAL-------D  229 (280)
T ss_pred             HHHHcCCcEecCchhh--HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCc-eee-------C
Confidence            9999999998886542  233333 345689999999985 578999999999999999997643211 011       1


Q ss_pred             HHHHHhcCeEEEEecC
Q 018013          347 CEKILAKSQTVVCIHG  362 (362)
Q Consensus       347 ~~~~~~k~~~i~G~~g  362 (362)
                      ...++.|+++|.|+++
T Consensus       230 ~~~~~~~~~~i~g~~~  245 (280)
T TIGR03366       230 PEQVVRRWLTIRGVHN  245 (280)
T ss_pred             HHHHHhCCcEEEecCC
Confidence            3368899999999764

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=8.1e-27  Score=218.18  Aligned_cols=258  Identities=35%  Similarity=0.520  Sum_probs=208.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |+++++...+..  ..+.+.+.+ +.+..+++++|++.++++|+.|++...|.+..+     ...|..+|+|++|+|+.+
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-----~~~~~~~g~e~~G~v~~~   72 (323)
T cd08241           1 MKAVVCKELGGP--EDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK-----PPLPFVPGSEVAGVVEAV   72 (323)
T ss_pred             CeEEEEecCCCc--ceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCC-----CCCCCcccceeEEEEEEe
Confidence            678887754322  235666666 633336999999999999999999887765321     223567899999999999


Q ss_pred             CCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchH
Q 018013          167 GDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGT  242 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~v  242 (362)
                      |+++..+++||+|+++. .|++++|+.++.+.++++|++  ..++++++..+.+||+++..... +++++|+|+|++|++
T Consensus        73 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~  152 (323)
T cd08241          73 GEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGV  152 (323)
T ss_pred             CCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence            99999999999999997 899999999999999999985  34566688899999999987666 899999999988999


Q ss_pred             HHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCC
Q 018013          243 GQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYG  321 (362)
Q Consensus       243 G~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G  321 (362)
                      |++++++|+..|++|+++++++++.+.++++|++.+++....++.+.+... .++++|+++||+|+.....++++++++|
T Consensus       153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g  232 (323)
T cd08241         153 GLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGG  232 (323)
T ss_pred             HHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCC
Confidence            999999999999999999999999999999999888888776666666555 4468999999999988899999999999


Q ss_pred             EEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          322 RLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       322 ~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++.+|........  ..       ....+.+++++.|+.
T Consensus       233 ~~v~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~  263 (323)
T cd08241         233 RLLVIGFASGEIPQ--IP-------ANLLLLKNISVVGVY  263 (323)
T ss_pred             EEEEEccCCCCcCc--CC-------HHHHhhcCcEEEEEe
Confidence            99999975432210  00       012456777777753

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.96  E-value=2.5e-27  Score=209.77  Aligned_cols=240  Identities=30%  Similarity=0.445  Sum_probs=195.7

Q ss_pred             ccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCC----CceEEEEEEeCCCCCCCCCCCeEEEec
Q 018013          108 APLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAG----FEAVGLIAAVGDSVNNVKVGTPAAIMT  183 (362)
Q Consensus       108 ~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~  183 (362)
                      .+++.++++++|+||..|.+..|.-...+.-..+.+     .-.|+.+|    ..++|.|++.  +..++++||.|.++.
T Consensus        29 ~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~-----y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~  101 (343)
T KOG1196|consen   29 VELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD-----YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV  101 (343)
T ss_pred             ecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc-----ccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec
Confidence            444557899999999999999875433222211111     11223333    2678888886  456899999999988


Q ss_pred             CCCeeeEEEeeCCC--eeeCCCC-----CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 018013          184 FGSYAEFTMVPSKH--ILPVARP-----DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN  255 (362)
Q Consensus       184 ~g~~~~~~~v~~~~--~~~ip~~-----~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~  255 (362)
                        +|.||.+++...  .++++.+     +....++..+.+|||.++.+... ++|++|+|.||+|++|+.+.|+|+.+|+
T Consensus       102 --gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc  179 (343)
T KOG1196|consen  102 --GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC  179 (343)
T ss_pred             --cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC
Confidence              899999998763  3455542     23344677899999999998888 9999999999999999999999999999


Q ss_pred             EEEEecCCHhHHHHHH-HcCCcEEEeCCCc-cHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCccccc
Q 018013          256 TVVATCGGEHKAQLLK-ELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       256 ~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                      +|+.++.+++|...++ ++|.|..+||.++ +..+.+++..+.|+|+.||++|+.++++.+..|+..||++.||+.++|+
T Consensus       180 ~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  180 YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYN  259 (343)
T ss_pred             EEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhcc
Confidence            9999999999999997 6899999999987 8888999889999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          334 GEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ...+....+++    .++.|+++|.||
T Consensus       260 ~~~~~~~~~l~----~ii~Kr~~iqgf  282 (343)
T KOG1196|consen  260 LENPEGLHNLS----TIIYKRIRIQGF  282 (343)
T ss_pred             ccCCccccchh----hheeeeEEeeeE
Confidence            87554434433    488999999997

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.9e-26  Score=217.65  Aligned_cols=235  Identities=34%  Similarity=0.473  Sum_probs=194.5

Q ss_pred             EEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCC
Q 018013           89 KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGD  168 (362)
Q Consensus        89 a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~  168 (362)
                      ++.++..+.  ...+.+.+.+.| ++.+++|+|++.++++|+.|++...|.+..     ....|.++|+|++|+|+.+|+
T Consensus         2 ~~~~~~~~~--~~~~~~~~~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-----~~~~~~~~g~e~~G~v~~~g~   73 (337)
T cd08275           2 AVVLTGFGG--LDKLKVEKEALP-EPSSGEVRVRVEACGLNFADLMARQGLYDS-----APKPPFVPGFECAGTVEAVGE   73 (337)
T ss_pred             eEEEcCCCC--ccceEEEecCCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCCC-----CCCCCCCCcceeEEEEEEECC
Confidence            455544332  134667777777 789999999999999999999988776532     124466899999999999999


Q ss_pred             CCCCCCCCCeEEEecC-CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHH
Q 018013          169 SVNNVKVGTPAAIMTF-GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQ  244 (362)
Q Consensus       169 ~v~~~~~Gd~V~~~~~-g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~  244 (362)
                      ++.++++||+|+++.. |+|++|+.++.+.++++|+.  ..+++.++.++.+||+++..... ++|++|+|+|++|++|+
T Consensus        74 ~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~  153 (337)
T cd08275          74 GVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGL  153 (337)
T ss_pred             CCcCCCCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHH
Confidence            9999999999999864 99999999999999999985  45667788899999999987777 99999999999899999


Q ss_pred             HHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEE
Q 018013          245 FAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRL  323 (362)
Q Consensus       245 ~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~  323 (362)
                      +++++|+.. +..++... .+++.+.++++|++.+++....++...++...++++|+++||+|+.....++++++++|++
T Consensus       154 ~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~  232 (337)
T cd08275         154 AAGQLCKTVPNVTVVGTA-SASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRL  232 (337)
T ss_pred             HHHHHHHHccCcEEEEeC-CHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEE
Confidence            999999998 44443332 3557888888999999988877777766666567899999999998889999999999999


Q ss_pred             EEEcCcccc
Q 018013          324 IVIGMISQY  332 (362)
Q Consensus       324 v~~G~~~~~  332 (362)
                      +.+|.....
T Consensus       233 v~~g~~~~~  241 (337)
T cd08275         233 VVYGAANLV  241 (337)
T ss_pred             EEEeecCCc
Confidence            999987653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=4.5e-27  Score=220.19  Aligned_cols=221  Identities=33%  Similarity=0.475  Sum_probs=184.8

Q ss_pred             EEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEec
Q 018013          104 IKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT  183 (362)
Q Consensus       104 ~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  183 (362)
                      .+.+.+.| +++++||+|++.++++|++|++...|.++...   ....|..+|+|++|+|+++|++++++++||+|+...
T Consensus        15 ~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~---~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~   90 (319)
T cd08267          15 LEVEVPIP-TPKPGEVLVKVHAASVNPVDWKLRRGPPKLLL---GRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRL   90 (319)
T ss_pred             ccccCCCC-CCCCCEEEEEEEEeeCCHHHHHHHcCCCcccc---cCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEec
Confidence            67777888 78999999999999999999998877653211   123456799999999999999999999999999876


Q ss_pred             ----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE
Q 018013          184 ----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT  256 (362)
Q Consensus       184 ----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~  256 (362)
                          .|+|++|+.++.+.++++|++  ..+++.++.++.+||+++..... ++|++|+|+|++|++|++++++|+..|++
T Consensus        91 ~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~  170 (319)
T cd08267          91 PPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAH  170 (319)
T ss_pred             cCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE
Confidence                499999999999999999985  45677888899999999998886 99999999998899999999999999999


Q ss_pred             EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH--HHHHHHHHhccCCEEEEEcCccc
Q 018013          257 VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD--MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       257 Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      |++++++ ++.+.++++|++++++....++.  .....++++|++++|+++.  .....+..++++|+|+.+|....
T Consensus       171 v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~  244 (319)
T cd08267         171 VTGVCST-RNAELVRSLGADEVIDYTTEDFV--ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPS  244 (319)
T ss_pred             EEEEeCH-HHHHHHHHcCCCEeecCCCCCcc--hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccc
Confidence            9999875 88888899999888887665543  2234456899999999953  33334444999999999997654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=1.8e-26  Score=212.31  Aligned_cols=208  Identities=30%  Similarity=0.454  Sum_probs=183.5

Q ss_pred             CeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCC
Q 018013          117 NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSK  196 (362)
Q Consensus       117 ~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~  196 (362)
                      +||+|++.++++|++|++...|.+        ...|.++|+|++|+|+++|+++..|++||+|+++..|+|++|+.++.+
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--------~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~   72 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--------PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDAR   72 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--------CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechh
Confidence            589999999999999999887753        124668999999999999999999999999999988999999999999


Q ss_pred             CeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc
Q 018013          197 HILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL  273 (362)
Q Consensus       197 ~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~  273 (362)
                      .++++|+.  ..+++.++.++.+||+++.+... ++|++|+|+|++|++|++++|+++..|++|+++++++++.+.+++.
T Consensus        73 ~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~  152 (293)
T cd05195          73 LVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLREL  152 (293)
T ss_pred             heEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh
Confidence            99999985  45666777899999999977666 9999999999999999999999999999999999999999999888


Q ss_pred             C--CcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccc
Q 018013          274 G--VDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       274 g--~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      |  ++.++++...++.+.+... .++++|+++|++|+..+..++++++++|+++.+|.....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~  214 (293)
T cd05195         153 GGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDIL  214 (293)
T ss_pred             CCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccc
Confidence            8  6788887766666665554 456899999999998999999999999999999976643

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.95  E-value=1.3e-25  Score=206.53  Aligned_cols=203  Identities=30%  Similarity=0.423  Sum_probs=179.2

Q ss_pred             EEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCee
Q 018013          120 LVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHIL  199 (362)
Q Consensus       120 ~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~  199 (362)
                      +||+.++++|+.|++...|.++         .|.++|+|++|+|+++|++++.|++||+|++..+|+|++|+.++.+.++
T Consensus         1 ~i~v~~~~i~~~d~~~~~g~~~---------~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~   71 (288)
T smart00829        1 EVEVRAAGLNFRDVLIALGLLP---------GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVV   71 (288)
T ss_pred             CeeEEEEecCHHHHHHhcCCCC---------CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeE
Confidence            3889999999999998877542         2467999999999999999999999999999988999999999999999


Q ss_pred             eCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC-
Q 018013          200 PVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV-  275 (362)
Q Consensus       200 ~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~-  275 (362)
                      ++|++  ..+++.++..+.++|+++..... ++|++|+|+|++|++|++++++++..|++|+++++++++.+.++++|+ 
T Consensus        72 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  151 (288)
T smart00829       72 PIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIP  151 (288)
T ss_pred             ECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            99985  45677788899999999966666 899999999999999999999999999999999999999999999998 


Q ss_pred             -cEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCccc
Q 018013          276 -DRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       276 -~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       +.++++...++.+.+... .++++|+++|++++..+..++++++++|+++.+|..+.
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~  209 (288)
T smart00829      152 DDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDI  209 (288)
T ss_pred             hhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCC
Confidence             788888776666655554 44679999999998888999999999999999997653

Enoylreductase in Polyketide synthases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.94  E-value=1.1e-26  Score=233.11  Aligned_cols=240  Identities=24%  Similarity=0.295  Sum_probs=203.7

Q ss_pred             ceEEEeccCC--CCCCCCeEEEEEeEEeeChhhhhhhcCCccCCC-CCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCe
Q 018013          102 ATIKVRAPLR--LPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG-NDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP  178 (362)
Q Consensus       102 ~~~~~~~~~p--~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~  178 (362)
                      .+++.+.+..  .+..++.=+.-|.|+.||++|+.+.+|+.+.+. ........+.+|.||+|+          .+-|.|
T Consensus      1428 SlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrR 1497 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRR 1497 (2376)
T ss_pred             ceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcE
Confidence            4666666654  466778889999999999999999999987655 111233456799999996          567999


Q ss_pred             EEEecC-CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCC
Q 018013          179 AAIMTF-GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAG  254 (362)
Q Consensus       179 V~~~~~-g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G  254 (362)
                      |+++.+ -++++.+.++.++++.+|..  .+++.+.|+.|.||||||...+. ++|+++|||+|+||+|++++.+|.+.|
T Consensus      1498 vM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G 1577 (2376)
T KOG1202|consen 1498 VMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHG 1577 (2376)
T ss_pred             EEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcC
Confidence            999875 58899999999999999985  68888999999999999999998 999999999999999999999999999


Q ss_pred             CEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCc
Q 018013          255 NTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       255 ~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ++||.|+.+.+|++++.+    +...++-|+++.++...+... .|+|+|+|+|+...+.++++++||+..|||.++|..
T Consensus      1578 ~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKf 1657 (2376)
T KOG1202|consen 1578 CTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKF 1657 (2376)
T ss_pred             CEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecce
Confidence            999999999999999965    334578899999999877664 578999999999999999999999999999999997


Q ss_pred             ccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          330 SQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +-.+..         .+-+.+..||.++.|+
T Consensus      1658 DLSqNs---------pLGMavfLkNvsfHGi 1679 (2376)
T KOG1202|consen 1658 DLSQNS---------PLGMAVFLKNVSFHGI 1679 (2376)
T ss_pred             ecccCC---------cchhhhhhcccceeee
Confidence            754432         1233577899998886

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.90  E-value=7.6e-22  Score=181.77  Aligned_cols=173  Identities=28%  Similarity=0.401  Sum_probs=146.3

Q ss_pred             CCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhC
Q 018013          149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAG  226 (362)
Q Consensus       149 ~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~  226 (362)
                      ..+|.++|+|++|+|+++|+++++|++||+|+++.  .|++|+.++.+.++++|++  ..+++.+ .++++||+++....
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~~~   94 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG--PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVRDAE   94 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC--CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHhcC
Confidence            45788999999999999999999999999999874  7999999999999999985  3455555 78999999987433


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcC-CcEEEeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELG-VDRVINYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g-~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .++|++++|+| +|++|++++++|+.+|++ |+++++++++.+.++++| .+.+++...       ....++++|++||+
T Consensus        95 ~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~d~vl~~  166 (277)
T cd08255          95 PRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA-------DEIGGRGADVVIEA  166 (277)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-------hhhcCCCCCEEEEc
Confidence            39999999997 799999999999999998 999999999999889999 555554332       11245689999999


Q ss_pred             CC-hHHHHHHHHHhccCCEEEEEcCcccc
Q 018013          305 VG-GDMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       305 ~g-~~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      ++ ...+..++++++++|+++.+|..+..
T Consensus       167 ~~~~~~~~~~~~~l~~~g~~~~~g~~~~~  195 (277)
T cd08255         167 SGSPSALETALRLLRDRGRVVLVGWYGLK  195 (277)
T ss_pred             cCChHHHHHHHHHhcCCcEEEEEeccCCC
Confidence            88 47788999999999999999986653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.70  E-value=7.4e-17  Score=127.58  Aligned_cols=81  Identities=36%  Similarity=0.646  Sum_probs=69.7

Q ss_pred             CCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCeEEEec------------
Q 018013          116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------------  183 (362)
Q Consensus       116 ~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------  183 (362)
                      |+||+|||.++|||++|++++.|...     ....+|.++|||++|+|+++|++|++|++||+|+...            
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~-----~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~   75 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPP-----PPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLS   75 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSS-----STSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHT
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccc-----cCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcC
Confidence            68999999999999999999998522     2467899999999999999999999999999999843            


Q ss_pred             ----------------CCCeeeEEEeeCCCeeeC
Q 018013          184 ----------------FGSYAEFTMVPSKHILPV  201 (362)
Q Consensus       184 ----------------~g~~~~~~~v~~~~~~~i  201 (362)
                                      .|+|+||+++|+++++|+
T Consensus        76 ~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   76 GRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                            399999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.70  E-value=1.8e-16  Score=129.17  Aligned_cols=113  Identities=35%  Similarity=0.497  Sum_probs=100.5

Q ss_pred             hHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC-CceeEEEECCC-hHHHHHHHHHhc
Q 018013          241 GTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVG-GDMFNLCLKALA  318 (362)
Q Consensus       241 ~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~-~g~Dvvid~~g-~~~~~~~~~~l~  318 (362)
                      |+|++++|+|+..|++|++++++++|.+.++++|+++++++++.++.+.+++.++ +++|+||||+| ++.++.++++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~   80 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR   80 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence            6899999999999999999999999999999999999999999999999888876 49999999999 799999999999


Q ss_pred             cCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEecC
Q 018013          319 VYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG  362 (362)
Q Consensus       319 ~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~g  362 (362)
                      ++|+++.+|.......         +.....++.|++++.|+++
T Consensus        81 ~~G~~v~vg~~~~~~~---------~~~~~~~~~~~~~i~g~~~  115 (130)
T PF00107_consen   81 PGGRIVVVGVYGGDPI---------SFNLMNLMFKEITIRGSWG  115 (130)
T ss_dssp             EEEEEEEESSTSTSEE---------EEEHHHHHHTTEEEEEESS
T ss_pred             cCCEEEEEEccCCCCC---------CCCHHHHHhCCcEEEEEcc
Confidence            9999999999882222         1223469999999999864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.21  E-value=2e-10  Score=113.02  Aligned_cols=126  Identities=17%  Similarity=0.140  Sum_probs=94.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-------------cHHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAE-------------DIKTVFKEE  293 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-------------~~~~~~~~~  293 (362)
                      .++++|+|.| +|.+|+++++.|+.+|++|++++.++++++.++++|++++ ++..++             ++.+..++.
T Consensus       163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            6899999999 7999999999999999999999999999999999999854 655332             222222222


Q ss_pred             -CC--CceeEEEECCChH------H-HHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHh-cCeEEEEec
Q 018013          294 -FP--KGFDIIYESVGGD------M-FNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILA-KSQTVVCIH  361 (362)
Q Consensus       294 -~~--~g~Dvvid~~g~~------~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~-k~~~i~G~~  361 (362)
                       ..  +++|+||+|++.+      . .+.+++.++++|+++++|...+.+-+.....       +.+.. |++++.|..
T Consensus       242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~-------~~v~~~~gVti~Gv~  313 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPG-------EVVVTDNGVTIIGYT  313 (509)
T ss_pred             HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCc-------cceEeECCEEEEEeC
Confidence             22  5799999999842      4 4999999999999999998543221111111       13554 899999864

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.91  E-value=4.1e-08  Score=94.55  Aligned_cols=121  Identities=19%  Similarity=0.173  Sum_probs=92.8

Q ss_pred             HHHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          217 TASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       217 tA~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ..|.++.+...  -+|++|+|.| .|.+|+.+++.++.+|++|++++.++.|.+.++++|++.+ +     ..+.+    
T Consensus       187 s~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~~e~v----  255 (413)
T cd00401         187 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----MEEAV----  255 (413)
T ss_pred             hhHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----HHHHH----
Confidence            34566655544  6899999999 7999999999999999999999999999999999998543 1     12222    


Q ss_pred             CCceeEEEECCCh-HHHHHH-HHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          295 PKGFDIIYESVGG-DMFNLC-LKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~~~-~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                       .++|+||+|+|. ..+... +++++++|+++.+|..   ..+  +.       ...+..+.+++.|.+
T Consensus       256 -~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~e--Id-------~~~L~~~el~i~g~~  311 (413)
T cd00401         256 -KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVE--ID-------VKGLKENAVEVVNIK  311 (413)
T ss_pred             -cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCc--cC-------HHHHHhhccEEEEcc
Confidence             358999999996 456655 9999999999999954   111  11       234777888888875

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.60  E-value=8.7e-07  Score=78.16  Aligned_cols=109  Identities=23%  Similarity=0.320  Sum_probs=79.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC----cEEEeCCCc-cHHHHHHHHCC--CceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV----DRVINYKAE-DIKTVFKEEFP--KGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~----~~v~~~~~~-~~~~~~~~~~~--~g~Dv  300 (362)
                      +++.++|+||++|+|.++++.+...|++|+.+.|+.++++.+. +++.    ...+|..+. ++...+.....  +.+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            5688999999999999999999999999999999999999885 6772    245666653 44444443322  45999


Q ss_pred             EEECCCh---H-----------------------HHHHHHHHh--ccCCEEEEEcCcccccCCCC
Q 018013          301 IYESVGG---D-----------------------MFNLCLKAL--AVYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       301 vid~~g~---~-----------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~  337 (362)
                      ++|++|-   +                       ..+..+..|  +..|.+|.+|+..+....+.
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~  149 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG  149 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC
Confidence            9999983   1                       111233333  34689999999987655443

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.38  E-value=2.7e-06  Score=83.86  Aligned_cols=104  Identities=20%  Similarity=0.218  Sum_probs=80.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCC-------------ccHHHHHHH-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKA-------------EDIKTVFKE-  292 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~-------------~~~~~~~~~-  292 (362)
                      .++.+|+|.| +|.+|++++++++.+|++|++++.+.++++.++++|++.+ ++..+             +++.+...+ 
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            4679999999 7999999999999999999999999999999999998753 33211             122221122 


Q ss_pred             HC--CCceeEEEECC---Ch-H---HHHHHHHHhccCCEEEEEcCcccc
Q 018013          293 EF--PKGFDIIYESV---GG-D---MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       293 ~~--~~g~Dvvid~~---g~-~---~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      ..  .+++|++|+|+   |. .   ..+..++.|++|+.+|+++.-.+.
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GG  289 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGG  289 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCC
Confidence            11  35799999999   53 2   567889999999999999875543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.29  E-value=3e-05  Score=72.11  Aligned_cols=105  Identities=18%  Similarity=0.227  Sum_probs=79.6

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCcee
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      ++..... -.+++|+|.| .|.+|+.+++.++.+|++|++++++.++.+.++++|+..+ ..  .++.+.+     .++|
T Consensus       142 a~~~~~~~l~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l-----~~aD  212 (296)
T PRK08306        142 AIEHTPITIHGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL--SELAEEV-----GKID  212 (296)
T ss_pred             HHHhCCCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHh-----CCCC
Confidence            3444444 4689999999 6999999999999999999999999888888888887533 11  1222221     3589


Q ss_pred             EEEECCChHH-HHHHHHHhccCCEEEEEcCcccccC
Q 018013          300 IIYESVGGDM-FNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       300 vvid~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +||++++... ....++.+++++.++.++...+..+
T Consensus       213 iVI~t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd  248 (296)
T PRK08306        213 IIFNTIPALVLTKEVLSKMPPEALIIDLASKPGGTD  248 (296)
T ss_pred             EEEECCChhhhhHHHHHcCCCCcEEEEEccCCCCcC
Confidence            9999998643 3567788999999999998776543

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.28  E-value=1.1e-05  Score=74.20  Aligned_cols=107  Identities=17%  Similarity=0.304  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-cHHHHHHH---HCCCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAE-DIKTVFKE---EFPKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-~~~~~~~~---~~~~g~Dvvid  303 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+.+.++..+ .|..+. ++.+.+..   ..++.+|++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            46799999999999999999988899999999999888887776665433 355442 23333332   23457999999


Q ss_pred             CCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          304 SVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       304 ~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      +.|..                          ..+.+++.+++  .|+||.+++..+..+.
T Consensus        83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~  142 (277)
T PRK05993         83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPM  142 (277)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCC
Confidence            98620                          03345555643  4799999987765543

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.23  E-value=2.5e-05  Score=71.71  Aligned_cols=104  Identities=22%  Similarity=0.270  Sum_probs=73.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCC-ccHHHHHHHH--CCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKA-EDIKTVFKEE--FPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~-~~~~~~~~~~--~~~g~Dvvid~~g  306 (362)
                      ++++|+||+|++|..+++.+...|++|++++++.++.+.+.+.+...+ .|..+ +++.+.+...  ..+++|++|++.|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            579999999999999999999999999999999888777766665433 45554 3344443333  1246999999998


Q ss_pred             h----H----------------------HHHHHHHHhcc-CCEEEEEcCcccccC
Q 018013          307 G----D----------------------MFNLCLKALAV-YGRLIVIGMISQYQG  334 (362)
Q Consensus       307 ~----~----------------------~~~~~~~~l~~-~G~~v~~G~~~~~~~  334 (362)
                      .    .                      ..+.++..++. .|++|.+++..+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~  136 (274)
T PRK05693         82 YGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV  136 (274)
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC
Confidence            2    1                      12234444444 489999988776544

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.23  E-value=2e-05  Score=76.38  Aligned_cols=104  Identities=21%  Similarity=0.174  Sum_probs=81.2

Q ss_pred             HHHHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH
Q 018013          216 LTASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       216 ~tA~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~  293 (362)
                      ..+|.++.+...  -.|++|+|.| .|.+|..+++.++.+|++|++++.++.+...+...|+. +.     ++.+.+   
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~-----~l~eal---  265 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VM-----TMEEAA---  265 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ec-----CHHHHH---
Confidence            345677766633  5899999999 79999999999999999999999988877666666764 22     222222   


Q ss_pred             CCCceeEEEECCCh-HHHH-HHHHHhccCCEEEEEcCccc
Q 018013          294 FPKGFDIIYESVGG-DMFN-LCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       294 ~~~g~Dvvid~~g~-~~~~-~~~~~l~~~G~~v~~G~~~~  331 (362)
                        .++|+||+++|. ..+. ..+..+++++.++.+|....
T Consensus       266 --~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        266 --ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             --hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence              268999999996 4555 67899999999999998764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.22  E-value=2.2e-05  Score=71.09  Aligned_cols=109  Identities=24%  Similarity=0.316  Sum_probs=77.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H----cCCc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E----LGVD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~----~g~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      ..+++++|+||++|+|...+..+...|.+++.+.|+++|++.+. +    .|.. +++  |..+ +++.....++.  +.
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            56889999999999999999999999999999999999998874 2    3333 233  3333 33333333333  34


Q ss_pred             ceeEEEECCCh----H-----------HH-----------HHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGG----D-----------MF-----------NLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~----~-----------~~-----------~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      .+|+.+||+|-    .           ++           ...+..+.  ..|.|+.+|+..++.+.+
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p  151 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP  151 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc
Confidence            79999999982    1           11           12223332  258999999999988764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.19  E-value=9.7e-06  Score=69.45  Aligned_cols=78  Identities=19%  Similarity=0.250  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC---cEEEeCCCcc-HHHHHHHHCC--CceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV---DRVINYKAED-IKTVFKEEFP--KGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~---~~v~~~~~~~-~~~~~~~~~~--~g~Dvvi  302 (362)
                      .|.+|||+||++|+|+++++-...+|.+||++.+++++++.++....   ..+.|..+.+ ..+.+.....  ...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            47899999999999999999999999999999999999999986443   2555665533 2333333221  3589999


Q ss_pred             ECCC
Q 018013          303 ESVG  306 (362)
Q Consensus       303 d~~g  306 (362)
                      ||+|
T Consensus        84 NNAG   87 (245)
T COG3967          84 NNAG   87 (245)
T ss_pred             eccc
Confidence            9998

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.12  E-value=4.2e-05  Score=73.70  Aligned_cols=102  Identities=21%  Similarity=0.170  Sum_probs=78.6

Q ss_pred             HHHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          217 TASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       217 tA~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      .+|.++.+...  ..|++|+|.| .|.+|..+++.++.+|++|++++.++.+...+...|+. +.+     ..+.+    
T Consensus       180 s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal----  248 (406)
T TIGR00936       180 STIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAA----  248 (406)
T ss_pred             hHHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHH----
Confidence            34555555533  7899999999 89999999999999999999999888877667767763 221     22222    


Q ss_pred             CCceeEEEECCCh-HHHH-HHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGG-DMFN-LCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~-~~~~~l~~~G~~v~~G~~~  330 (362)
                       .+.|+||+++|. ..+. ..+..+++++.++.+|...
T Consensus       249 -~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       249 -KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             -hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence             357999999996 4454 4888999999999999875

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK06182 short chain dehydrogenase; Validated

Probab=98.12  E-value=3.4e-05  Score=70.79  Aligned_cols=105  Identities=24%  Similarity=0.294  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcE-EEeCCC-ccHHHHHHHH--CCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDR-VINYKA-EDIKTVFKEE--FPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~-v~~~~~-~~~~~~~~~~--~~~g~Dvvid~  304 (362)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+...++.. ..|..+ +++.+.+...  ..+++|++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            4689999999999999999998889999999999988877666555542 245544 2333333332  13479999999


Q ss_pred             CChH--------------------------HHHHHHHHhcc--CCEEEEEcCccccc
Q 018013          305 VGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQ  333 (362)
Q Consensus       305 ~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~  333 (362)
                      .|..                          ..+.+++.++.  .|+||.+++.....
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~  138 (273)
T PRK06182         82 AGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI  138 (273)
T ss_pred             CCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC
Confidence            8721                          12334445543  48999999876533

>PRK12742 oxidoreductase; Provisional

Probab=98.06  E-value=8.8e-05  Score=66.29  Aligned_cols=101  Identities=26%  Similarity=0.349  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH-HHcCCcEE-EeCCCc-cHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL-KELGVDRV-INYKAE-DIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l-~~~g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+++++|+||+|++|.++++.+...|++|+.+.+ ++++.+.+ .+.+...+ .|..+. .+.+.+..  .+++|++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK--SGALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH--hCCCcEEEEC
Confidence            4789999999999999999999999999988765 44555444 34555432 333332 23333322  2459999999


Q ss_pred             CChH--------------------------HHHHHHHHhccCCEEEEEcCccc
Q 018013          305 VGGD--------------------------MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       305 ~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|..                          ..+.+++.++.+|++|.+++...
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence            8731                          01244455667899999988765

>PRK08324 short chain dehydrogenase; Validated

Probab=98.05  E-value=4.8e-05  Score=79.02  Aligned_cols=108  Identities=25%  Similarity=0.302  Sum_probs=75.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC--c---EEEeCCCc-cHHHHHHHH--CCCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV--D---RVINYKAE-DIKTVFKEE--FPKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~--~---~v~~~~~~-~~~~~~~~~--~~~g~  298 (362)
                      .+|+++||+||+|++|..+++.+...|++|++++++.++.+.+. +++.  .   ...|..+. .+.+.+...  ..+++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999988776654 3433  1   22344432 233333322  12469


Q ss_pred             eEEEECCCh--------------------------HHHHHHHHHhcc---CCEEEEEcCcccccCC
Q 018013          299 DIIYESVGG--------------------------DMFNLCLKALAV---YGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~--------------------------~~~~~~~~~l~~---~G~~v~~G~~~~~~~~  335 (362)
                      |++|+++|.                          ..++.+++.+++   +|+||.+++.....+.
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~  565 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG  565 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC
Confidence            999999981                          123455666666   6899999987765543

>PRK06139 short chain dehydrogenase; Provisional

Probab=98.04  E-value=4.4e-05  Score=72.28  Aligned_cols=108  Identities=20%  Similarity=0.320  Sum_probs=72.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHH--CCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDR-V--INYKA-EDIKTVFKEE--FPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~--~~~g  297 (362)
                      -.+++++|+||+|++|.++++.+...|++|+++++++++.+.+    ++.|.+. +  .|..+ +++.+.+...  ..++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            3578999999999999999999999999999999998877654    3456542 2  34443 2233332222  1246


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+|+|.           +.               .+.+++.+.  ..|+||.+++...+.+.
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~  150 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ  150 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC
Confidence            9999999982           11               112334443  35899999887766553

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.03  E-value=7.9e-05  Score=67.91  Aligned_cols=107  Identities=18%  Similarity=0.128  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .+++++|+|++|++|.++++.+...|++|++++++.++.+.+. +++.. ..  .|..+ +++.+.+....  -+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999999999999999999887666553 44432 12  34333 22333333221  1458999


Q ss_pred             EECCChH-------------------------HHHHHHHHh-ccCCEEEEEcCcccccCC
Q 018013          302 YESVGGD-------------------------MFNLCLKAL-AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~~-------------------------~~~~~~~~l-~~~G~~v~~G~~~~~~~~  335 (362)
                      +++.|..                         ..+.+++.+ +.+|+||.+++.....+.
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~  144 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ  144 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC
Confidence            9998720                         122334445 567999999987765443

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.03  E-value=7.6e-05  Score=66.75  Aligned_cols=103  Identities=23%  Similarity=0.325  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHc---CCcEEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KEL---GVDRVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~---g~~~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++|+|+|++|++|..+++.+...|++|+.+++++++.+.+ ++.   +..+.+  |..+ +.+.+.++...  -+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999999999999998877666 222   222333  2222 22333333221  24689


Q ss_pred             EEEECCChH------------------------HHHHHHHHhccCCEEEEEcCccc
Q 018013          300 IIYESVGGD------------------------MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       300 vvid~~g~~------------------------~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .++.+.+..                        .++..+++++++|+||.++....
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~  139 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG  139 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            999988731                        24456667778899999998765

>PLN02494 adenosylhomocysteinase

Probab=98.03  E-value=5.8e-05  Score=73.46  Aligned_cols=100  Identities=19%  Similarity=0.183  Sum_probs=79.0

Q ss_pred             HHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          219 SIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       219 ~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      +.++.+...  -.|++|+|.| .|.+|..+++.++.+|++|+++..++.+...+...|+..+      ++.+.+     .
T Consensus       241 ~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv------~leEal-----~  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL------TLEDVV-----S  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec------cHHHHH-----h
Confidence            555555544  6799999999 7999999999999999999999998877666766776532      233332     2


Q ss_pred             ceeEEEECCChH-H-HHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGGD-M-FNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~~-~-~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ..|+++++.|.. . ....++.|++++.++.+|...
T Consensus       309 ~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        309 EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            479999999964 3 478999999999999999854

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.03  E-value=6.6e-05  Score=68.56  Aligned_cols=109  Identities=20%  Similarity=0.282  Sum_probs=76.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcE-E--E--eCCC-ccHHHHHHHH--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDR-V--I--NYKA-EDIKTVFKEE--FP  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~-v--~--~~~~-~~~~~~~~~~--~~  295 (362)
                      -.|+.|+|+||++|+|.+++.-.-..|++++.+++..++++.+    ++.+... +  +  |-.+ ++..+.+.+.  .-
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            4689999999999999998888888899988888887776666    3444432 2  1  2222 3333333332  23


Q ss_pred             CceeEEEECCChH--------------------------HHHHHHHHhccC--CEEEEEcCcccccCCC
Q 018013          296 KGFDIIYESVGGD--------------------------MFNLCLKALAVY--GRLIVIGMISQYQGEH  336 (362)
Q Consensus       296 ~g~Dvvid~~g~~--------------------------~~~~~~~~l~~~--G~~v~~G~~~~~~~~~  336 (362)
                      +++|+.+|++|-.                          ..+.+++.|++.  |+||.+++..+....+
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P  158 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP  158 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence            5799999999821                          223566777654  9999999999877743

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.02  E-value=6.2e-05  Score=70.07  Aligned_cols=108  Identities=22%  Similarity=0.281  Sum_probs=73.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC--cE-E--EeCCC-ccHHHHHHHHC--CCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV--DR-V--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~--~~-v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      -.|++++|+||+|++|.++++.+...|++|++++++.++.+.+. +++.  .. .  .|..+ +++.+.+....  -+.+
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999999988776653 4542  21 1  34443 22333333221  1469


Q ss_pred             eEEEECCCh-----------HH---------------HHHHHHHh-ccCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGG-----------DM---------------FNLCLKAL-AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~-----------~~---------------~~~~~~~l-~~~G~~v~~G~~~~~~~~  335 (362)
                      |++|++.|.           +.               .+.++..+ +..|+||.+++...+.+.
T Consensus        87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  150 (296)
T PRK05872         87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA  150 (296)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC
Confidence            999999983           11               12233333 457999999988776553

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.01  E-value=8.8e-05  Score=67.77  Aligned_cols=107  Identities=26%  Similarity=0.334  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-c----CCc-E--EEeCCC-ccHHHHHHHHC-CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-L----GVD-R--VINYKA-EDIKTVFKEEF-PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~----g~~-~--v~~~~~-~~~~~~~~~~~-~~g~  298 (362)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+.+ +    +.. .  ..|..+ +++.+.+.... -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            57899999999999999999999999999999998877655432 1    322 1  234333 23333333321 2469


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      |+++++.|..                          ..+.+++.|+.  .|++|.+++.....+.
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~  151 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI  151 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC
Confidence            9999998731                          12345555643  4899999998765543

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.99  E-value=0.00011  Score=65.87  Aligned_cols=107  Identities=21%  Similarity=0.306  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEE-EeCCCcc-HHHHHHHHCCCceeEEEEC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRV-INYKAED-IKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v-~~~~~~~-~~~~~~~~~~~g~Dvvid~  304 (362)
                      .++++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ .+...+ .|..+.+ +.+.+..  .+++|++|++
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~   84 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNC   84 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEEC
Confidence            457899999999999999999999999999999998877766643 444322 3444322 2222222  2468999999


Q ss_pred             CCh-----------H---------------HHHHHHHHhc-c--CCEEEEEcCcccccCCC
Q 018013          305 VGG-----------D---------------MFNLCLKALA-V--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~l~-~--~G~~v~~G~~~~~~~~~  336 (362)
                      .|.           +               ..+.+++.+. .  .|+||.+++...+.+..
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  145 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP  145 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC
Confidence            873           1               1123333332 2  37999999876655433

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.98  E-value=0.00017  Score=66.32  Aligned_cols=107  Identities=18%  Similarity=0.193  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhHH---HHH-HHcCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHKA---QLL-KELGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~~---~~l-~~~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +++++||+||++  |+|.++++.+...|++|+++.++++..   +.+ ++.|....  .|..+ +++.+.+....  -+.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            578999999886  999999999988999999988765322   222 23454332  23333 23333333321  146


Q ss_pred             eeEEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++|+|..                              ..+.+++.|..+|++|.+++.......
T Consensus        86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~  153 (271)
T PRK06505         86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM  153 (271)
T ss_pred             CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC
Confidence            99999998720                              112344566677999999887664443

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.95  E-value=9.3e-05  Score=70.19  Aligned_cols=108  Identities=18%  Similarity=0.209  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEE---EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRV---INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+++++|+||+|++|..+++.+...|++|+++++++++.+.+    ++.|....   .|..+ +++.+.+....  -++
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            3568999999999999999999988999999999988776554    23454322   34433 22333333221  136


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+++|..                          ..+.+++.+.+  .|+||.+++...+...
T Consensus        86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~  151 (334)
T PRK07109         86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI  151 (334)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC
Confidence            99999998731                          12234555654  5899999998876553

>PRK06128 oxidoreductase; Provisional

Probab=97.93  E-value=0.00013  Score=68.05  Aligned_cols=111  Identities=22%  Similarity=0.285  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh--HH----HHHHHcCCcE-E--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH--KA----QLLKELGVDR-V--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~--~~----~~l~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .++++||+||+|++|.+++..+...|++|+++.++.+  +.    +.++..|... +  .|..+ +++.+.+.+..  -+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999998889999988765432  11    2233345432 2  23333 22333332221  24


Q ss_pred             ceeEEEECCCh----H-----------------------HHHHHHHHhccCCEEEEEcCcccccCCCCCC
Q 018013          297 GFDIIYESVGG----D-----------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       297 g~Dvvid~~g~----~-----------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      ++|++|+++|.    .                       ..+.+++.++++|+||.+++...+.....+.
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  203 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLL  203 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCch
Confidence            69999999872    0                       2234455667789999999988776544433

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.93  E-value=0.00021  Score=61.68  Aligned_cols=129  Identities=17%  Similarity=0.198  Sum_probs=85.6

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EEEeCCC-ccHH---HHHHHHCCCceeE
Q 018013          228 ASGKKVLVTA-AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RVINYKA-EDIK---TVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~g-a~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v~~~~~-~~~~---~~~~~~~~~g~Dv  300 (362)
                      ...+.|||+| +.||+|.+++.-....|+.|++|.++-+....|. ++|.. .-+|..+ +++.   ..++....+..|+
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            4567899998 5789999999999999999999999988888776 77764 2244443 3333   3334345577999


Q ss_pred             EEECCChH-----------HHH----------------HHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhc
Q 018013          301 IYESVGGD-----------MFN----------------LCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAK  353 (362)
Q Consensus       301 vid~~g~~-----------~~~----------------~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k  353 (362)
                      .+|++|..           .++                ....+++..|+||.+|+..++.+..=-..++....+-..+.+
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~  164 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYAR  164 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhh
Confidence            99998831           111                122356889999999999987774211222333333334444


Q ss_pred             CeE
Q 018013          354 SQT  356 (362)
Q Consensus       354 ~~~  356 (362)
                      .|+
T Consensus       165 tLr  167 (289)
T KOG1209|consen  165 TLR  167 (289)
T ss_pred             hcE
Confidence            443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.92  E-value=0.00015  Score=65.63  Aligned_cols=113  Identities=20%  Similarity=0.252  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH--HHHHHHcCCcE---EEeCCC-ccHHHHHHHHC--CCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK--AQLLKELGVDR---VINYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~--~~~l~~~g~~~---v~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      .+++++|+||++++|.++++.+...|++|+++.+++.+  .+.+++.+...   ..|..+ +++.+.++...  -+++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999998999999988875432  22334455432   234444 33333333321  246999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCCCCCCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGEHGWQPS  341 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~~~~~~  341 (362)
                      +++|.|.           +               ..+.+++.+.+   +|+||.+++...+.+...+..+
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  156 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSY  156 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcch
Confidence            9999872           1               12234444432   5899999998776554433333

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.90  E-value=0.00014  Score=65.96  Aligned_cols=106  Identities=19%  Similarity=0.172  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .|++++|+||+  +|+|.++++.+...|++|+++.++++..+.++++...  +.  .|..+ +++.+.+....  -+.+|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            57899999998  7999999998888999999998874433444443221  12  23333 23333333321  14699


Q ss_pred             EEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          300 IIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       300 vvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      ++++++|..                              ..+..++.++++|++|.++.......
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~  150 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA  150 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc
Confidence            999998720                              12234566777899999988776544

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.90  E-value=0.00048  Score=62.56  Aligned_cols=143  Identities=22%  Similarity=0.242  Sum_probs=87.1

Q ss_pred             CCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCCC-HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHH
Q 018013          171 NNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD-PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQL  249 (362)
Q Consensus       171 ~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~~-~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiql  249 (362)
                      +.+++||++++.+  +|.++.. +...++.+++.. ...+.-+... .....+... ..++++||-.| +|. |..++.+
T Consensus        65 ~p~~~g~~~~i~p--~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~~l~~l~~~-~~~~~~VLDiG-cGs-G~l~i~~  137 (250)
T PRK00517         65 HPIRIGDRLWIVP--SWEDPPD-PDEINIELDPGMAFGTGTHPTTR-LCLEALEKL-VLPGKTVLDVG-CGS-GILAIAA  137 (250)
T ss_pred             CCEEEcCCEEEEC--CCcCCCC-CCeEEEEECCCCccCCCCCHHHH-HHHHHHHhh-cCCCCEEEEeC-CcH-HHHHHHH
Confidence            3477899888776  5666644 666777776531 1111111111 112222222 26789999999 554 7777665


Q ss_pred             HHHCCC-EEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh----HHHHHHHHHhccC
Q 018013          250 AKLAGN-TVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG----DMFNLCLKALAVY  320 (362)
Q Consensus       250 a~~~G~-~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~----~~~~~~~~~l~~~  320 (362)
                      ++ .|+ +|++++.++...+.+++    .+....+.....          ...+|+|+.+...    ..++.+.+.|+++
T Consensus       138 ~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~----------~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg  206 (250)
T PRK00517        138 AK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG----------DLKADVIVANILANPLLELAPDLARLLKPG  206 (250)
T ss_pred             HH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC----------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCC
Confidence            54 576 69999999888777754    233111110000          1158999987664    3567788899999


Q ss_pred             CEEEEEcCccc
Q 018013          321 GRLIVIGMISQ  331 (362)
Q Consensus       321 G~~v~~G~~~~  331 (362)
                      |+++..|....
T Consensus       207 G~lilsgi~~~  217 (250)
T PRK00517        207 GRLILSGILEE  217 (250)
T ss_pred             cEEEEEECcHh
Confidence            99999876543

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.90  E-value=0.0003  Score=64.68  Aligned_cols=113  Identities=21%  Similarity=0.196  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--E--EEeCCCc-cHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--R--VINYKAE-DIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~--v~~~~~~-~~~~~~~~~~--~~g~Dvv  301 (362)
                      .+++++|+|++|++|.++++.+...|++|++++++.++.+.+.+....  .  ..|..+. .+.+.++...  -+++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            367899999999999999999888999999999998887766543221  1  2244332 2333333221  1458999


Q ss_pred             EECCChH-----------H---------------HHHHHHHhc--cCCEEEEEcCcccccCCCCCCCC
Q 018013          302 YESVGGD-----------M---------------FNLCLKALA--VYGRLIVIGMISQYQGEHGWQPS  341 (362)
Q Consensus       302 id~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~~~  341 (362)
                      ++++|..           .               .+..++.++  ..|+||.+++.....+..++..+
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y  150 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYY  150 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchh
Confidence            9998841           1               112223332  35899999987765544334433

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00018  Score=65.73  Aligned_cols=107  Identities=16%  Similarity=0.217  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -++++++|+||+|++|..+++.+...|++|+++++++++.+.+    .+.+.. +.  +|..+ +++.+.++...  -++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999999999999999999999999999987765443    223332 22  34433 22333333321  246


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc-cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA-VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~-~~G~~v~~G~~~~~~~  334 (362)
                      +|++|++.|.           +               ..+.+++.++ .+|+|+.++.......
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~  150 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP  150 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC
Confidence            9999998762           0               1223344443 5689999998766544

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00019  Score=64.49  Aligned_cols=105  Identities=20%  Similarity=0.219  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE-E--EeCCC-ccHHHHHHHH--CCCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR-V--INYKA-EDIKTVFKEE--FPKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~-v--~~~~~-~~~~~~~~~~--~~~g~Dvv  301 (362)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+. +++... .  .|..+ ++....+...  ..+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999999999999999999877665553 455432 2  23322 2222222221  12469999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCccccc
Q 018013          302 YESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                      |++.|.           +               ..+.+++.++..|+++.+++.....
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~  142 (249)
T PRK06500         85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI  142 (249)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc
Confidence            999873           0               1123444456678999888765533

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00026  Score=64.59  Aligned_cols=113  Identities=19%  Similarity=0.219  Sum_probs=72.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EE--EeCCCcc-HHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RV--INYKAED-IKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v--~~~~~~~-~~~~~~~~~--~~g  297 (362)
                      -+++++||+|++|++|..+++.+...|++|++++++.++.+.+.+    .+.. ++  .|..+.+ +.+.+....  -++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999998899999999998877655432    2322 22  3444322 333333221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHh---ccCCEEEEEcCcccccCCCCCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKAL---AVYGRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l---~~~G~~v~~G~~~~~~~~~~~~~  340 (362)
                      +|++|+++|.           +               ..+.+++.+   ...|+||.++...+......+..
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  159 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAA  159 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCch
Confidence            9999999872           0               111222333   34689999999776554443333

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.88  E-value=0.00015  Score=65.28  Aligned_cols=108  Identities=19%  Similarity=0.207  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcC--Cc-EE--EeCCC-ccHHHHHHHH--CCCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELG--VD-RV--INYKA-EDIKTVFKEE--FPKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g--~~-~v--~~~~~-~~~~~~~~~~--~~~g~D  299 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+. .+.  .. ..  .|..+ +++...+...  ..+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999998889999999999987766553 222  21 12  23333 2233333222  124699


Q ss_pred             EEEECCCh----H-----------------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          300 IIYESVGG----D-----------------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       300 vvid~~g~----~-----------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++.|.    .                       ..+.+++.+  ...|+||.++......+..
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  149 (251)
T PRK07231         84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP  149 (251)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC
Confidence            99999873    0                       123333444  3458999999987765543

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.88  E-value=0.00038  Score=63.74  Aligned_cols=110  Identities=18%  Similarity=0.161  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcC-Cc-EEEeCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELG-VD-RVINYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g-~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+. +++ +. ...|..+ +++.+.+....  -+++|+++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3679999999999999999888889999999999888776553 444 22 1234443 23333333221  14699999


Q ss_pred             ECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCC
Q 018013          303 ESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       303 d~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~  338 (362)
                      ++.|..                          ..+.++..+.  ..|+||.+++.....+...+
T Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  147 (273)
T PRK07825         84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGM  147 (273)
T ss_pred             ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCC
Confidence            998720                          1223344443  34799999998776554433

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.88  E-value=0.0002  Score=65.15  Aligned_cols=107  Identities=21%  Similarity=0.167  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCc-EE--EeCCC-ccHHHHHHHH--CCCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVD-RV--INYKA-EDIKTVFKEE--FPKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~Dvv  301 (362)
                      ++++++|+||++++|..+++.+...|++|+++++++++.+.+.+ ++.. ..  .|..+ +++.+.+.+.  .-+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57899999999999999999999999999999999888776653 3321 22  23333 2233333322  12469999


Q ss_pred             EECCChH-------------------------------HHHHHHHHh-ccCCEEEEEcCcccccCC
Q 018013          302 YESVGGD-------------------------------MFNLCLKAL-AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~~-------------------------------~~~~~~~~l-~~~G~~v~~G~~~~~~~~  335 (362)
                      ++++|..                               ..+.+++.+ +.+|++|.+++...+.+.
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  150 (263)
T PRK06200         85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG  150 (263)
T ss_pred             EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC
Confidence            9998720                               012334444 357899999987765543

>PRK06484 short chain dehydrogenase; Validated

Probab=97.87  E-value=0.00016  Score=72.62  Aligned_cols=114  Identities=17%  Similarity=0.207  Sum_probs=79.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcE---EEeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDR---VINYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~---v~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      ..|+++||+||++++|.++++.+...|++|++++++.++.+.+.+ ++...   ..|..+ +++.+.+....  -+.+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999998999999999998888777653 44432   234433 23333333321  146999


Q ss_pred             EEECCChH---------------------------HHHHHHHHhccCCEEEEEcCcccccCCCCCCCC
Q 018013          301 IYESVGGD---------------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPS  341 (362)
Q Consensus       301 vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~  341 (362)
                      +|+|+|..                           ..+.++..++.+|+||.+++.........+..+
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  414 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAY  414 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchh
Confidence            99998721                           123445666678999999998776654444433

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.87  E-value=0.00024  Score=64.62  Aligned_cols=79  Identities=30%  Similarity=0.423  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-----cCCcEE----EeCCCc-cHHHHHHHHC--
Q 018013          228 ASGKKVLVTAAAG-GTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-----LGVDRV----INYKAE-DIKTVFKEEF--  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g-~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-----~g~~~v----~~~~~~-~~~~~~~~~~--  294 (362)
                      ..+++++|+|++| ++|.++++.+...|++|+++++++++.+...+     ++...+    .|..+. ++...+....  
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999986 89999999999999999999988776654432     443222    243332 2333333321  


Q ss_pred             CCceeEEEECCC
Q 018013          295 PKGFDIIYESVG  306 (362)
Q Consensus       295 ~~g~Dvvid~~g  306 (362)
                      .+.+|++|+|.|
T Consensus        95 ~g~id~li~~ag  106 (262)
T PRK07831         95 LGRLDVLVNNAG  106 (262)
T ss_pred             cCCCCEEEECCC
Confidence            246999999998

>PRK08017 oxidoreductase; Provisional

Probab=97.87  E-value=0.00037  Score=62.96  Aligned_cols=76  Identities=21%  Similarity=0.339  Sum_probs=56.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-cHHHHHHH---HCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAE-DIKTVFKE---EFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-~~~~~~~~---~~~~g~Dvvid~~  305 (362)
                      ++++|+|++|++|.++++.+...|++|++++++.++.+.+++.++..+ .|..+. .+.+.+..   ..++.+|.++++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            579999999999999999999999999999999988888777776533 344432 22222222   2345689999987


Q ss_pred             C
Q 018013          306 G  306 (362)
Q Consensus       306 g  306 (362)
                      |
T Consensus        83 g   83 (256)
T PRK08017         83 G   83 (256)
T ss_pred             C
Confidence            7

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.00028  Score=64.31  Aligned_cols=107  Identities=20%  Similarity=0.241  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----Hc--CCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----EL--GVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~--g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .+++++|+||++++|.++++.+...|++|+++++++++.+.+.    +.  +.. +.  .|..+ +++.+.+....  -+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999887765542    11  112 12  24433 22333333221  24


Q ss_pred             ceeEEEECCChH-----------H---------------HHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGGD-----------M---------------FNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++++|+|..           .               .+..+..++  ..|+||.+++.....+.
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE  153 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC
Confidence            699999999820           1               122334443  35899999987765543

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.85  E-value=0.0004  Score=62.40  Aligned_cols=103  Identities=16%  Similarity=0.091  Sum_probs=67.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC--c-EEEeCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV--D-RVINYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~--~-~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++++|+||+|++|..++..+...|++|+++++++++.+.+.+.+.  . ...|..+ +++.+.+.... ...|.++.++|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP-FIPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc-cCCCEEEEcCc
Confidence            579999999999999888888889999999999888777654332  1 2234443 33334443332 34677777765


Q ss_pred             hH--------------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          307 GD--------------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       307 ~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      ..                          ..+.+...+++++++|.+++.....+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~  134 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA  134 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC
Confidence            20                          11123344556889999988665444

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.85  E-value=0.0003  Score=60.30  Aligned_cols=98  Identities=24%  Similarity=0.269  Sum_probs=72.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC-----h
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-----G  307 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g-----~  307 (362)
                      |+|.||+|.+|..+++.+...|.+|+++++++++.+.  ..++. ++..+-.+........  .++|+||.+.|     .
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~~~~~~al--~~~d~vi~~~~~~~~~~   75 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFDPDSVKAAL--KGADAVIHAAGPPPKDV   75 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTCHHHHHHHH--TTSSEEEECCHSTTTHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehhhhhhhhhh--hhcchhhhhhhhhcccc
Confidence            7999999999999999999999999999999998776  33443 3333333433333333  26999999998     3


Q ss_pred             HHHHHHHHHhccCC--EEEEEcCcccccCC
Q 018013          308 DMFNLCLKALAVYG--RLIVIGMISQYQGE  335 (362)
Q Consensus       308 ~~~~~~~~~l~~~G--~~v~~G~~~~~~~~  335 (362)
                      +.....++.++..|  +++.++..+.+...
T Consensus        76 ~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~  105 (183)
T PF13460_consen   76 DAAKNIIEAAKKAGVKRVVYLSSAGVYRDP  105 (183)
T ss_dssp             HHHHHHHHHHHHTTSSEEEEEEETTGTTTC
T ss_pred             cccccccccccccccccceeeeccccCCCC
Confidence            45666777776555  89998888866653

...

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.83  E-value=0.00032  Score=63.44  Aligned_cols=74  Identities=20%  Similarity=0.296  Sum_probs=52.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EE--EeCCCccHHHHHHHHCCCceeEEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RV--INYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v--~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      ++++||+|++|++|..+++.+...|++|+++++++++.+.+.+    .+.. .+  .|..+.  .+ +......++|++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~-~~~~~~~~id~vi   78 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA--ID-RAQAAEWDVDVLL   78 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH--HH-HHHHhcCCCCEEE
Confidence            4689999999999999999999999999999998776655532    3322 12  233332  22 2222234799999


Q ss_pred             ECCC
Q 018013          303 ESVG  306 (362)
Q Consensus       303 d~~g  306 (362)
                      +|.|
T Consensus        79 ~~ag   82 (257)
T PRK09291         79 NNAG   82 (257)
T ss_pred             ECCC
Confidence            9987

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.83  E-value=0.00039  Score=63.99  Aligned_cols=106  Identities=20%  Similarity=0.189  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHh---HHHHH-HHcCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEH---KAQLL-KELGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~---~~~~l-~~~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+  +|+|.++++.+...|++|+++.++++   +.+.+ ++++....  .|..+ +++.+.+....  -+.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47899999986  79999999988889999999988742   33333 34453322  34443 23333333321  246


Q ss_pred             eeEEEECCCh---------------H---------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG---------------D---------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~---------------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +|++++|+|.               +               ..+.+++.|.++|++|.+++......
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~  150 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY  150 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC
Confidence            9999999882               0               12345667778899999988766443

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.82  E-value=0.00045  Score=62.98  Aligned_cols=107  Identities=21%  Similarity=0.245  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHh---HHHHHH-HcCCcEE--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEH---KAQLLK-ELGVDRV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~---~~~~l~-~~g~~~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|++++|+||++  |+|.++++.+...|++|+.+.+++.   ..+.+. +.|....  .|..+ +++.+.+....  -+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999987  8999999888889999999887642   222232 3343332  34443 23333333321  14


Q ss_pred             ceeEEEECCCh-----------H-------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          297 GFDIIYESVGG-----------D-------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       297 g~Dvvid~~g~-----------~-------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      .+|+++++.|.           +                   ..+..++.++++|++|.+++......
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~  153 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV  153 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC
Confidence            69999998862           0                   11123455677899999988765443

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00038  Score=62.58  Aligned_cols=106  Identities=25%  Similarity=0.310  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      ++++++|+|++|++|..++..+...|++|+++++++++.+.+.    +.+.. .+  .|..+ +++.+.+....  -+++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999889999999998877665442    23332 22  24433 22333332221  1469


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      |++|+++|..                          ..+.+++.+.+  .|+||.+++.....+
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  149 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG  149 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC
Confidence            9999998731                          12233444444  789999998765444

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00034  Score=62.33  Aligned_cols=107  Identities=20%  Similarity=0.197  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHH----HHHcCCcEE-EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQL----LKELGVDRV-INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~----l~~~g~~~v-~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      +++++||+|++|++|..+++.+...|++|++++++.++...    ++..+...+ .|..+ +++.+.+....  -+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            47899999999999999999888889999999997765432    222333322 33333 22333333221  136999


Q ss_pred             EEECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          301 IYESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      |+++.|..                          ..+.+++.+  ...|+||.++....+...
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  148 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG  148 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC
Confidence            99988731                          112223333  346899999987765543

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.81  E-value=0.00043  Score=63.39  Aligned_cols=105  Identities=14%  Similarity=0.185  Sum_probs=68.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc--E--EEeCCCc-cHHHHHHHH--CCCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD--R--VINYKAE-DIKTVFKEE--FPKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~--~--v~~~~~~-~~~~~~~~~--~~~g~D  299 (362)
                      ++++|+||+|++|..+++.+...|++|+++.+++++.+.+    +..+..  .  ..|..+. ++.+...+.  ..+++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            3799999999999999999888999999999887765443    223432  1  2344442 222222222  124699


Q ss_pred             EEEECCChH--------------------------HHHHHHHHh---ccCCEEEEEcCcccccCC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKAL---AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l---~~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++.|..                          ..+..++.+   +.+|+||.+++.....+.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~  145 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL  145 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC
Confidence            999999731                          123344444   235899999987765443

>PRK08589 short chain dehydrogenase; Validated

Probab=97.81  E-value=0.00025  Score=65.00  Aligned_cols=106  Identities=19%  Similarity=0.224  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-H---HcCCc---EEEeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-K---ELGVD---RVINYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~---~~g~~---~v~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .++++||+|+++++|.++++.+...|++|++++++ ++.+.+ .   +.+..   ...|..+ +++.+.+....  -+++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            57899999999999999998888899999999998 443332 2   23332   2234443 22333333221  1469


Q ss_pred             eEEEECCChH------------HH---------------HHHHHHh-ccCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGGD------------MF---------------NLCLKAL-AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~~------------~~---------------~~~~~~l-~~~G~~v~~G~~~~~~~~  335 (362)
                      |+++++.|..            .+               +.+++.+ +.+|+||.+++.....+.
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  148 (272)
T PRK08589         84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD  148 (272)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC
Confidence            9999998721            11               1234444 456899999988776543

>PRK06398 aldose dehydrogenase; Validated

Probab=97.81  E-value=5e-05  Score=69.16  Aligned_cols=109  Identities=19%  Similarity=0.190  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHC--CCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      .|+++||+|+++++|.+++..+...|++|+++++++.+..     ... ...|..+ +++.+.+....  -+++|+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4789999999999999999999999999999988754321     111 1234433 23333333321  2459999999


Q ss_pred             CCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCCCCCCCC
Q 018013          305 VGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEHGWQPSN  342 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~~~~  342 (362)
                      .|.           +               ..+.+++.+  +..|+||.+++.....+...+..+.
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  145 (258)
T PRK06398         80 AGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYV  145 (258)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhh
Confidence            872           0               123345555  3468999999887765544444443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.80  E-value=0.00023  Score=64.43  Aligned_cols=107  Identities=17%  Similarity=0.232  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .++++||+|++|++|..+++.+...|++|+++.+++++.+.+    ++.|.. ..  .|..+ +++.+.+...  .-+.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999998888899999999987765543    223332 22  24333 2333333322  12469


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      |++|++.|..                          ..+.+.+.+.  ..|+||.++........
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  153 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR  153 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC
Confidence            9999998731                          1123333442  35899999887654443

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.80  E-value=0.00048  Score=62.30  Aligned_cols=107  Identities=17%  Similarity=0.255  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+.    ..+.. ..+  |..+ +++.+.+...  .-+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999988889999999999877655442    22332 222  3333 2233333222  12469


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      |+++++.|.           +               ..+.+++.+  +..|+||.++......+.
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (254)
T PRK08085         88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR  152 (254)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC
Confidence            999999873           1               122334444  245899999887654443

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.80  E-value=0.00033  Score=64.44  Aligned_cols=111  Identities=17%  Similarity=0.206  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+|++|++|.+++..+...|++|++++++.++.+.+.    ..+... .  .|..+ +++.+.+...  .-+.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998877655442    234332 2  23333 2233333222  12458


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHhc-c--CCEEEEEcCcccccCCCCCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKALA-V--YGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l~-~--~G~~v~~G~~~~~~~~~~~~  339 (362)
                      |++|++.|-           +               ..+.++..+. .  +|+||.+++...+.+...+.
T Consensus        85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~  154 (275)
T PRK05876         85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLG  154 (275)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCc
Confidence            999999872           1               1112333332 2  58999999887765544333

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.79  E-value=0.00035  Score=62.91  Aligned_cols=107  Identities=26%  Similarity=0.302  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh--HHHHHHHcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH--KAQLLKELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~--~~~~l~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      .+++++|+|++|++|..++..+...|++|++++++..  ..+.+++.+.. ..  .|..+ +++...+++..  .+++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999998889999999998652  12333444432 22  23333 23333333221  246999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhc-c--CCEEEEEcCcccccCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALA-V--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~-~--~G~~v~~G~~~~~~~~  335 (362)
                      ++++.|.           +               ..+.+++.+. .  .|++|.+++...+.+.
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  147 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG  147 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC
Confidence            9999873           1               1122333332 2  4899999987765543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.79  E-value=0.00035  Score=63.56  Aligned_cols=107  Identities=17%  Similarity=0.152  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCH---hHHHHHH-Hc-CCc-E--EEeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGE---HKAQLLK-EL-GVD-R--VINYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~---~~~~~l~-~~-g~~-~--v~~~~~-~~~~~~~~~~~--~  295 (362)
                      .+++++|+||+  +|+|.++++.+...|++|+.+.++.   ++.+.+. ++ +.. .  ..|..+ +++.+.+....  -
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            57899999987  7999999988888999999987542   3344443 33 222 1  234333 23333333322  1


Q ss_pred             CceeEEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          296 KGFDIIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       296 ~g~Dvvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +++|++++|+|..                              ..+.+++.++++|+||.+++.......
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  155 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV  155 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC
Confidence            4699999987620                              112345567778999999987765443

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.78  E-value=0.00031  Score=63.93  Aligned_cols=106  Identities=20%  Similarity=0.162  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCC------HhHHHHHHHcCCc-EE--EeCCC-ccHHHHHHHHC--
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGG------EHKAQLLKELGVD-RV--INYKA-EDIKTVFKEEF--  294 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~------~~~~~~l~~~g~~-~v--~~~~~-~~~~~~~~~~~--  294 (362)
                      .+++++|+||+  +++|.++++.+...|++|+++.++      ++..+.+.+.+.. ..  .|..+ +++.+.+....  
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            57899999975  799999999888899999887543      2223333332221 22  33333 23333333221  


Q ss_pred             CCceeEEEECCCh--------H----------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          295 PKGFDIIYESVGG--------D----------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       295 ~~g~Dvvid~~g~--------~----------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      -+++|++++|.|.        .                      ..+.+++.|+++|+||.+++.....+
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~  154 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA  154 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC
Confidence            2469999999872        1                      12345667777899999988766544

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00048  Score=62.53  Aligned_cols=104  Identities=21%  Similarity=0.192  Sum_probs=69.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cC-Cc---EEEeCCC-ccHHHHHHHH---CCCceeEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LG-VD---RVINYKA-EDIKTVFKEE---FPKGFDII  301 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g-~~---~v~~~~~-~~~~~~~~~~---~~~g~Dvv  301 (362)
                      +++||+||+|++|..+++.+...|++|++++++.++.+.+.+ .+ ..   ...|..+ .++.+.+...   ..+.+|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            579999999999999999888899999999999888776643 32 21   2234444 2233333322   13569999


Q ss_pred             EECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          302 YESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      ++|+|..                          ..+.+.+.++  ++|+||.+++.....+
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  142 (260)
T PRK08267         82 FNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG  142 (260)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC
Confidence            9998731                          1122333443  4689999998765444

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.78  E-value=0.00032  Score=63.39  Aligned_cols=78  Identities=23%  Similarity=0.269  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .++++||+||+|++|..+++.+...|++|+.++++.+..+...++...  ..  .|..+ +++.+.+....  -+++|++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999998888999999999987655444443221  12  23333 22333222221  1469999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      ++++|
T Consensus        94 i~~ag   98 (255)
T PRK06841         94 VNSAG   98 (255)
T ss_pred             EECCC
Confidence            99987

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.77  E-value=0.00054  Score=62.38  Aligned_cols=78  Identities=23%  Similarity=0.206  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc-CCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL-GVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~-g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      ++++++|+||+|++|.++++.+...|++|++++++.++.+.+++. +.. +.  .|..+ +++.+.+++..  -+.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999999999999999999988877766543 322 12  23333 22333333221  1468999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      +++.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.77  E-value=0.00045  Score=62.43  Aligned_cols=110  Identities=20%  Similarity=0.258  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHH-------
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKE-------  292 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~-------  292 (362)
                      .+++++|+|+++++|.++++.+...|++|+++. ++.++.+.+    ++.+.. ..  .|..+ +++...+..       
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            478999999999999999999999999998874 444444332    222332 12  22222 122222221       


Q ss_pred             HCC-CceeEEEECCChH--------------------------HHHHHHHHhccCCEEEEEcCcccccCCCCC
Q 018013          293 EFP-KGFDIIYESVGGD--------------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       293 ~~~-~g~Dvvid~~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~  338 (362)
                      ..+ +++|++++++|..                          ..+.+++.+++.|+||.+++.........+
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDF  155 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCc
Confidence            112 3699999998720                          122456667778999999998876554333

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.76  E-value=0.0005  Score=63.09  Aligned_cols=110  Identities=21%  Similarity=0.170  Sum_probs=71.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCc-EEE--eCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVD-RVI--NYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      +++++|+||+|++|..+++.+...|++|++++++.++.+.+.+ .+.. +.+  |..+ +++.+.+....  -+++|+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999888889999999998887766543 2222 222  3333 22333222221  24689999


Q ss_pred             ECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCCCCCC
Q 018013          303 ESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       303 d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~~~~  339 (362)
                      +|.|..                          ..+.+++.+++  .|++|.+++.....+...+.
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  147 (275)
T PRK08263         83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSG  147 (275)
T ss_pred             ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCcc
Confidence            998731                          12344444443  57999999877666544333

>PRK09242 tropinone reductase; Provisional

Probab=97.76  E-value=0.00065  Score=61.55  Aligned_cols=110  Identities=16%  Similarity=0.200  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----c--CCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----L--GVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~--g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.+    .  +.. ..  .|..+ +++.+.+....  -+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999998877655432    1  222 12  23333 22333332221  24


Q ss_pred             ceeEEEECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCCCCC
Q 018013          297 GFDIIYESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       297 g~Dvvid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~  338 (362)
                      ++|+++++.|..                          ..+.+++.|  ...|+|+.++......+....
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~  157 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG  157 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC
Confidence            699999999730                          122334444  345899999887765554333

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00036  Score=63.33  Aligned_cols=110  Identities=17%  Similarity=0.180  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc-----CCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL-----GVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~-----g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+. ++     +.. .+  .|..+ +++.+.+....  -+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999899999999999877765543 22     222 12  23333 22333333221  24


Q ss_pred             ceeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCC
Q 018013          297 GFDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       297 g~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~  338 (362)
                      ++|++++++|..                          ..+.+++.+.  ..|+||.+++.........+
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (260)
T PRK07063         86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGC  155 (260)
T ss_pred             CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCc
Confidence            699999998720                          1123344443  34899999988766554333

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00061  Score=61.74  Aligned_cols=112  Identities=19%  Similarity=0.244  Sum_probs=71.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH---cCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE---LGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~---~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      -+++++||+||+|++|..+++.+...|++|+++++++++.+..++   .+.. +.  .|..+ +++...+....  -+++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            357899999999999999998888899999999988776543333   3432 22  23333 22333332221  2469


Q ss_pred             eEEEECCChH-------------------------HHHHHHHHhc-cCCEEEEEcCcccccCCCCCC
Q 018013          299 DIIYESVGGD-------------------------MFNLCLKALA-VYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       299 Dvvid~~g~~-------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      |++|+++|..                         ..+.+++.++ ..|+|+.++......+...+.
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~  151 (258)
T PRK08628         85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTS  151 (258)
T ss_pred             CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCc
Confidence            9999999820                         1123344443 468999999877654433333

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.74  E-value=0.00055  Score=62.28  Aligned_cols=106  Identities=17%  Similarity=0.204  Sum_probs=68.5

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHhHH---HHH-HHcCCcEEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEHKA---QLL-KELGVDRVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~~~---~~l-~~~g~~~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|++++|+||+  +|+|.++++.+...|++|+++.++++..   +.+ ++++....+  |..+ +++.+.+....  -+
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            357999999987  4999999999888999999998875432   233 233432233  3332 23333333321  14


Q ss_pred             ceeEEEECCCh---------------H---------------HHHHHHHHhccCCEEEEEcCccccc
Q 018013          297 GFDIIYESVGG---------------D---------------MFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       297 g~Dvvid~~g~---------------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                      .+|++++|+|.               +               ..+.++..|+.+|+++.+++.....
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~  154 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK  154 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc
Confidence            69999999862               0               1234566677789999988766543

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.0012  Score=58.93  Aligned_cols=106  Identities=19%  Similarity=0.221  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC---cEEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV---DRVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~---~~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+. ++..   -+.+  |..+ .++.+.+....  .+++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999888888999999999887765543 3321   1222  3333 22333333221  24699


Q ss_pred             EEEECCChH--------------------------HHHHHHHHh-ccCCEEEEEcCcccccC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKAL-AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l-~~~G~~v~~G~~~~~~~  334 (362)
                      ++|++.|..                          ..+.+++.+ +..|++|.++.......
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~  146 (237)
T PRK07326         85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF  146 (237)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC
Confidence            999997631                          112233444 34688999988765443

>PRK07985 oxidoreductase; Provisional

Probab=97.74  E-value=0.00054  Score=63.69  Aligned_cols=113  Identities=20%  Similarity=0.198  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH--hHHHHH----HHcCCcE---EEeCCC-ccHHHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE--HKAQLL----KELGVDR---VINYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l----~~~g~~~---v~~~~~-~~~~~~~~~~~--~  295 (362)
                      -.+++++|+||++++|.++++.+...|++|+++.++.  ++.+.+    ++.+...   ..|..+ +++.+.+....  -
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999988999999886542  233333    2334321   223333 22333333321  2


Q ss_pred             CceeEEEECCChH---------------------------HHHHHHHHhccCCEEEEEcCcccccCCCCCCC
Q 018013          296 KGFDIIYESVGGD---------------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       296 ~g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~  340 (362)
                      +++|+++++.|..                           .++.+++.++.+|+||.+++...+.....+..
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~  198 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLD  198 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcch
Confidence            4699999987620                           22345555667899999999877665443333

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00079  Score=60.90  Aligned_cols=114  Identities=18%  Similarity=0.196  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cCCc---EEEeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LGVD---RVINYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g~~---~v~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+. +   .+..   ...|..+ +++...+....  -+.+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            5789999999999999999999899999999999887665543 2   2332   2233333 22333332221  1458


Q ss_pred             eEEEECCCh--H-------------------------HHHHHHHHhc-cCCEEEEEcCcccccCCCCCCCCC
Q 018013          299 DIIYESVGG--D-------------------------MFNLCLKALA-VYGRLIVIGMISQYQGEHGWQPSN  342 (362)
Q Consensus       299 Dvvid~~g~--~-------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~~~~~~~  342 (362)
                      |++|++.|.  .                         ..+.+++.++ .+|+||.+++.....+...+..+.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~  155 (258)
T PRK07890         84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYK  155 (258)
T ss_pred             cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhH
Confidence            999999873  1                         1112333332 357999999877655544444333

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00056  Score=62.10  Aligned_cols=107  Identities=13%  Similarity=0.165  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhH-HHH----HHHcCC-c-EE--EeCCC-ccHHHHHHHHC-C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHK-AQL----LKELGV-D-RV--INYKA-EDIKTVFKEEF-P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~-~~~----l~~~g~-~-~v--~~~~~-~~~~~~~~~~~-~  295 (362)
                      ..+++|+|+||+|++|.++++.+... |++|+++++++++ .+.    +++.+. + ++  .|..+ +++.+.++... .
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            46789999999999999999876666 4899999998765 333    333343 2 22  34333 22333333322 2


Q ss_pred             CceeEEEECCChH-----H----------H-----------HHHHHHhcc--CCEEEEEcCcccccC
Q 018013          296 KGFDIIYESVGGD-----M----------F-----------NLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       296 ~g~Dvvid~~g~~-----~----------~-----------~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      +++|+++++.|..     .          +           +..++.+.+  .|+||.+++..+..+
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~  152 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV  152 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC
Confidence            4799999887631     0          1           124445543  489999998876443

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00061  Score=61.57  Aligned_cols=106  Identities=17%  Similarity=0.213  Sum_probs=68.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      |++++|+|++|++|..+++.+...|++|++++++.++.+.+.    +.+.. +.+  |..+ +++.+.+.+..  -+++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            578999999999999999999999999999999877665543    22322 233  3333 23333333321  14689


Q ss_pred             EEEECCChH--------------------------HHHHHHHHh-c--cCCEEEEEcCcccccCC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKAL-A--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l-~--~~G~~v~~G~~~~~~~~  335 (362)
                      +++++.|..                          ..+.+++.+ .  ..|+|+.++...+....
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~  145 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG  145 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC
Confidence            999998731                          112333333 2  25899999887765443

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00054  Score=61.99  Aligned_cols=78  Identities=23%  Similarity=0.357  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-EE--eCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-VI--NYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+|+++++|..++..+...|++|+.+++++++.+.+.    +.+.+. .+  |..+ +++.+.++...  -+++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999988889999999999887766553    234332 22  3333 22233333221  1369


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++++++|
T Consensus        85 d~li~~ag   92 (254)
T PRK07478         85 DIAFNNAG   92 (254)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK06484 short chain dehydrogenase; Validated

Probab=97.73  E-value=0.00039  Score=69.91  Aligned_cols=109  Identities=23%  Similarity=0.268  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE---EEeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR---VINYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~---v~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      ..+++++|+|+++++|.++++.+...|++|++++++.++.+.+. +++...   ..|..+ +++.+.+....  .+++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            46789999999999999999999999999999999888766553 455432   234433 23333333321  246999


Q ss_pred             EEECCCh--H--------------------------HHHHHHHHhc---cCCEEEEEcCcccccCCC
Q 018013          301 IYESVGG--D--------------------------MFNLCLKALA---VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~--~--------------------------~~~~~~~~l~---~~G~~v~~G~~~~~~~~~  336 (362)
                      ++++.|.  .                          ..+.+++.|.   .+|+||.+++........
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~  149 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP  149 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC
Confidence            9999873  0                          2234555552   235999998877655433

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00053  Score=62.14  Aligned_cols=108  Identities=21%  Similarity=0.286  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHH----HHHcCCcE---EEeCCCc-cHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQL----LKELGVDR---VINYKAE-DIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~----l~~~g~~~---v~~~~~~-~~~~~~~~~~--~~  296 (362)
                      -.+++++|+|++|++|..+++.+...|++ |++++++.++...    +++.+...   ..|..+. .+.+.+....  -+
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999998 9999988765542    23344432   2344432 2333333221  13


Q ss_pred             ceeEEEECCChH--------------------------HHHHHHHHhcc---CCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGGD--------------------------MFNLCLKALAV---YGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~~--------------------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|++.|..                          ..+.+++.+..   .|++|.++....+...
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~  151 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ  151 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC
Confidence            699999998731                          12234454533   4899999988765543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.72  E-value=0.00043  Score=68.38  Aligned_cols=106  Identities=25%  Similarity=0.308  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH--hHHHHH-HHcCCc-EEEeCCCcc-HHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE--HKAQLL-KELGVD-RVINYKAED-IKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l-~~~g~~-~v~~~~~~~-~~~~~~~~~--~~g~Dvv  301 (362)
                      ++++++|+|++|++|..+++.+...|++|+++++..  ++.+.+ .+++.. ...|..+.+ +.+.+....  .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999999999999999988742  333333 345543 234555432 333333221  2369999


Q ss_pred             EECCCh-----------HHHHHHH---------------H--HhccCCEEEEEcCcccccC
Q 018013          302 YESVGG-----------DMFNLCL---------------K--ALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       302 id~~g~-----------~~~~~~~---------------~--~l~~~G~~v~~G~~~~~~~  334 (362)
                      |++.|.           +.++..+               .  .++++|+||.+++.....+
T Consensus       289 i~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g  349 (450)
T PRK08261        289 VHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG  349 (450)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC
Confidence            999882           1222222               2  4566799999998766544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.71  E-value=0.00054  Score=61.79  Aligned_cols=104  Identities=24%  Similarity=0.308  Sum_probs=69.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcE-E--EeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDR-V--INYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      .+++|+|++|++|.+++..+...|++|+++++++++.+.+.. ++... .  .|..+ +++.+.+....  .+++|+++.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            368999999999999999999999999999999887766643 44331 2  23333 22333333321  246999999


Q ss_pred             CCChH---------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          304 SVGGD---------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       304 ~~g~~---------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      ++|..                           ..+.+++.+.  ..|+||.++.......
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  140 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP  140 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC
Confidence            98631                           1233444443  3479999998766544

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00083  Score=59.98  Aligned_cols=78  Identities=15%  Similarity=0.169  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHH---HCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKE---EFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~---~~~~g  297 (362)
                      .|++++|+|+++++|.+++..+...|++|+++.++.++.+.+.    +.+... .  .|..+ +++.+.+..   ..+..
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999888889999999999888765542    334432 2  23333 233333332   23436


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|++.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00072  Score=61.18  Aligned_cols=79  Identities=27%  Similarity=0.335  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EEE--eCCC-ccHHHHHHHH--CCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RVI--NYKA-EDIKTVFKEE--FPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v~--~~~~-~~~~~~~~~~--~~~g  297 (362)
                      ..+++++|+|++|++|..++..+...|++|++++++.++.+.+.+    .+.. +++  |..+ +++.+.+...  ..+.
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            467999999999999999999998899999999999887665532    1221 222  3333 2333333222  1246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|++.|
T Consensus        87 ~d~li~~ag   95 (258)
T PRK06949         87 IDILVNNSG   95 (258)
T ss_pred             CCEEEECCC
Confidence            899999988

>PRK05717 oxidoreductase; Validated

Probab=97.70  E-value=0.00075  Score=61.11  Aligned_cols=112  Identities=20%  Similarity=0.196  Sum_probs=70.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      ..|++++|+|++|++|..++..+...|++|++++++.++.+.+ ++++.. +.  .|..+ +++.+.+.+..  -+.+|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999999999999999999888999999998877665544 344432 22  23333 22222222221  135899


Q ss_pred             EEECCChH----------------------------HHHHHHHHh-ccCCEEEEEcCcccccCCCCCC
Q 018013          301 IYESVGGD----------------------------MFNLCLKAL-AVYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       301 vid~~g~~----------------------------~~~~~~~~l-~~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      +|++.|..                            ..+.+++.+ +.+|++|.+++.....+...+.
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~  155 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTE  155 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCc
Confidence            99998721                            111223333 3468999998877655433333

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.69  E-value=0.00074  Score=61.80  Aligned_cols=112  Identities=22%  Similarity=0.283  Sum_probs=80.5

Q ss_pred             CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEecCCHhHHHHHH-----HcCCc---EEEeCCCcc--HHHHHHHHCCC
Q 018013          228 ASGKKVLVTAAAGGTGQFA-VQLAKLAGNTVVATCGGEHKAQLLK-----ELGVD---RVINYKAED--IKTVFKEEFPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~a-iqla~~~G~~Vi~~~~~~~~~~~l~-----~~g~~---~v~~~~~~~--~~~~~~~~~~~  296 (362)
                      +-|++.+|+||+.|+|.+- -++|+ .|.+|+.+.|+++|++.++     +.++.   +++|..+.+  +.+..+.+.+-
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence            5679999999999999885 45666 8999999999999998774     24542   567877655  55555556667


Q ss_pred             ceeEEEECCCh-----HHH-----------------------HHHHHH-h-ccCCEEEEEcCcccccCCCCCCC
Q 018013          297 GFDIIYESVGG-----DMF-----------------------NLCLKA-L-AVYGRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       297 g~Dvvid~~g~-----~~~-----------------------~~~~~~-l-~~~G~~v~~G~~~~~~~~~~~~~  340 (362)
                      .+-+.+||+|-     +.+                       +..+.. + +..|.++.+|+..+..+.+.|..
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~  199 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSV  199 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHH
Confidence            78899999983     111                       111221 2 35799999999998777654443

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.69  E-value=0.00074  Score=60.51  Aligned_cols=109  Identities=19%  Similarity=0.198  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ..+++++|+|++|++|..++..+...|++|+++++++++.+.+.    +.+.. .+  .|..+ +++...++...  -++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34679999999999999999999989999999999887665543    22322 12  23333 22222232221  245


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      +|+++++.|.           +               ..+.+++.+.  ..|+||.++....+.+..
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  150 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP  150 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC
Confidence            9999999873           0               1123334443  358999999887665543

>PRK08643 acetoin reductase; Validated

Probab=97.69  E-value=0.00079  Score=60.90  Aligned_cols=110  Identities=16%  Similarity=0.153  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-EE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-VI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      +++++|+|++|++|..+++.+...|++|++++++.++.+.+.    +.+... .+  |..+ +.+.+.+.+..  -+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999877655443    223321 22  3333 22333333221  24699


Q ss_pred             EEEECCChH-----------H---------------HHHHHHHhc---cCCEEEEEcCcccccCCCCCC
Q 018013          300 IIYESVGGD-----------M---------------FNLCLKALA---VYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       300 vvid~~g~~-----------~---------------~~~~~~~l~---~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      ++|+|.|..           .               .+.+++.++   .+|++|.+++.....+...+.
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  150 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELA  150 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCc
Confidence            999998630           1               112333332   358999999876654433333

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.68  E-value=0.00096  Score=61.22  Aligned_cols=78  Identities=19%  Similarity=0.220  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+|++|++|.++++.+...|++|++++++.++.+.+.    +.+.. ..  .|..+ .++...+....  -+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999899999999999876655442    23332 22  23333 22333333221  2469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|+++|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00056  Score=63.32  Aligned_cols=78  Identities=23%  Similarity=0.327  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH---------hHHHHH----HHcCCcE-E--EeCCC-ccHHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE---------HKAQLL----KELGVDR-V--INYKA-EDIKTVFK  291 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~---------~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~  291 (362)
                      .+++++|+||++++|.++++.+...|++|++++++.         ++.+.+    ++.+... .  .|..+ +++.+.++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            578999999999999999998888999999987654         333332    2234332 2  23333 22333333


Q ss_pred             HHC--CCceeEEEECCC
Q 018013          292 EEF--PKGFDIIYESVG  306 (362)
Q Consensus       292 ~~~--~~g~Dvvid~~g  306 (362)
                      ...  -+.+|++++|+|
T Consensus        85 ~~~~~~g~id~lv~nAG  101 (286)
T PRK07791         85 AAVETFGGLDVLVNNAG  101 (286)
T ss_pred             HHHHhcCCCCEEEECCC
Confidence            321  246999999987

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.001  Score=61.05  Aligned_cols=110  Identities=24%  Similarity=0.288  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCC--c-EE--EeCCC-ccHHHHHHHH--CCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGV--D-RV--INYKA-EDIKTVFKEE--FPK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~--~-~v--~~~~~-~~~~~~~~~~--~~~  296 (362)
                      .++++||+||+|++|..++..+...|++|++++++.++.+.+.+    .+.  . ++  .|..+ +++.+ +.+.  .-+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            46789999999999999999888889999999998776655432    222  1 22  23333 22333 3322  124


Q ss_pred             ceeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCCC
Q 018013          297 GFDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       297 g~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      ++|+++.|.|..                          ..+.+++.++  ..|+||.++......+..++.
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~  151 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLS  151 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCc
Confidence            689999998731                          1223333343  348999998876544433333

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.68  E-value=0.00056  Score=61.54  Aligned_cols=102  Identities=19%  Similarity=0.286  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+|++|++|..++..+...|++|+++.++.+ +.+.+    +..+.. ..  .|..+ +++...+....  -++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999988889999999888643 33322    223332 22  24443 22333333221  146


Q ss_pred             eeEEEECCCh--------------------HHHHHHHHHhccCCEEEEEcCcc
Q 018013          298 FDIIYESVGG--------------------DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       298 ~Dvvid~~g~--------------------~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +|+++.+.|.                    ..++.+.+.+..+|++|.+++..
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~  137 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQ  137 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCch
Confidence            8999998863                    13445566666678999998743

>PRK12743 oxidoreductase; Provisional

Probab=97.68  E-value=0.00063  Score=61.68  Aligned_cols=110  Identities=18%  Similarity=0.263  Sum_probs=68.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHH----HHHcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQL----LKELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~----l~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +++++|+||++++|..+++.+...|++|+.+.+ +.++.+.    ++..+.. ++  .|..+ +++...+.+..  -+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999988754 4443333    2334543 22  23333 22333333221  1368


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCCCCCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~~~~  339 (362)
                      |++|.+.|.           +               ..+.++..+..   +|+||.++......+..++.
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~  151 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGAS  151 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcc
Confidence            999999872           0               11234444532   58999999887655543333

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.68  E-value=0.00069  Score=60.53  Aligned_cols=106  Identities=25%  Similarity=0.382  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDR-V--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      ++++++|+|++|++|..+++.+...|.+|+++.+++++.+.+    ++.+... +  .|..+ ..+.+.+....  -..+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467999999999999999999888999999999988775443    2344332 2  23333 22333333221  1458


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      |.+++++|..                          ..+.+++.+..  .++||.++......+
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~  147 (246)
T PRK05653         84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG  147 (246)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC
Confidence            9999998631                          11233344433  369999998765444

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.68  E-value=0.00096  Score=60.49  Aligned_cols=104  Identities=21%  Similarity=0.278  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH---HcCCcE---EEeCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK---ELGVDR---VINYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~---~~g~~~---v~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++...+..+   ..+.+.   ..|..+ +++.+.+.+..  -+++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            4789999999999999999999889999999998754332222   234331   234443 22333333321  24699


Q ss_pred             EEEECCChH---------------------------HHHHHHHHhcc--CCEEEEEcCcccc
Q 018013          300 IIYESVGGD---------------------------MFNLCLKALAV--YGRLIVIGMISQY  332 (362)
Q Consensus       300 vvid~~g~~---------------------------~~~~~~~~l~~--~G~~v~~G~~~~~  332 (362)
                      ++++++|..                           ..+.+++.+.+  .|+||.+++...+
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  148 (260)
T PRK12823         87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR  148 (260)
T ss_pred             EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc
Confidence            999998721                           11244555533  4799999887664

>PRK06194 hypothetical protein; Provisional

Probab=97.67  E-value=0.00055  Score=63.15  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cCCc-EEE--eCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LGVD-RVI--NYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g~~-~v~--~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .++++||+||+|++|..+++.+...|++|++++++.++.+.+. +   .+.. .++  |..+ +++.+.+...  ..+++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988889999999998876654442 2   2433 223  3332 2233332221  12468


Q ss_pred             eEEEECCCh
Q 018013          299 DIIYESVGG  307 (362)
Q Consensus       299 Dvvid~~g~  307 (362)
                      |++|+++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999883

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00064  Score=61.69  Aligned_cols=80  Identities=24%  Similarity=0.274  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCc----EEEeCCCc-cHHHHHHHHC--CCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVD----RVINYKAE-DIKTVFKEEF--PKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~----~v~~~~~~-~~~~~~~~~~--~~g~D  299 (362)
                      -+++++||+||+|++|..+++.+...|++|+++.++.++.+.+.+ ..-.    ...|..+. .+.+.+....  -.++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            567899999999999999999999999999999998776665543 2211    22343332 2222222221  14699


Q ss_pred             EEEECCCh
Q 018013          300 IIYESVGG  307 (362)
Q Consensus       300 vvid~~g~  307 (362)
                      +||.+.|.
T Consensus        89 ~vi~~ag~   96 (264)
T PRK12829         89 VLVNNAGI   96 (264)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.67  E-value=0.0011  Score=61.00  Aligned_cols=107  Identities=18%  Similarity=0.207  Sum_probs=68.6

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCH---hHHHHH-HHcCCcEE--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGE---HKAQLL-KELGVDRV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~---~~~~~l-~~~g~~~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.+++++|+||+  +|+|.++++.+...|++|+.+.+++   ++.+.+ ++++....  .|..+ +++.+.+....  -+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            357899999986  7999999999989999999887763   333333 23453222  23333 23333333321  24


Q ss_pred             ceeEEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          297 GFDIIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       297 g~Dvvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      .+|++++++|..                              ..+.+++.++.+|++|.+++......
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~  155 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV  155 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC
Confidence            699999998720                              11234556777899999987665443

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00061  Score=63.22  Aligned_cols=112  Identities=22%  Similarity=0.267  Sum_probs=70.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHH----HHHcCCcE-E--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQL----LKELGVDR-V--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~----l~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -+++++||+|++|++|..+++.+...|++|+++.++.++ .+.    ++..+... +  .|..+ +.+.+.+.+..  -+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999998888889999998876432 222    22334332 2  23333 22333332221  24


Q ss_pred             ceeEEEECCChH---------------------------HHHHHHHHhccCCEEEEEcCcccccCCCCCC
Q 018013          297 GFDIIYESVGGD---------------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       297 g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      ++|++|+++|..                           ..+.+++.+++.|+||.++....+.+...+.
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~  193 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLI  193 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcc
Confidence            689999998731                           1123445566779999999987766544443

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.66  E-value=0.00065  Score=68.03  Aligned_cols=100  Identities=15%  Similarity=0.194  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH---------cCC-----cEE--EeCCCccHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE---------LGV-----DRV--INYKAEDIKTVFK  291 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~---------~g~-----~~v--~~~~~~~~~~~~~  291 (362)
                      +.|++|+|+||+|++|..+++.+...|++|++++++.++.+.+.+         .|.     ..+  .|..+  .... .
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD--~esI-~  154 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK--PDQI-G  154 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--HHHH-H
Confidence            789999999999999999999998899999999999887765422         121     112  23333  2222 2


Q ss_pred             HHCCCceeEEEECCChH----------------HHHHHHHHhcc--CCEEEEEcCccc
Q 018013          292 EEFPKGFDIIYESVGGD----------------MFNLCLKALAV--YGRLIVIGMISQ  331 (362)
Q Consensus       292 ~~~~~g~Dvvid~~g~~----------------~~~~~~~~l~~--~G~~v~~G~~~~  331 (362)
                      ... +++|+||+|+|..                ....+++.+..  .|+||.++....
T Consensus       155 ~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga  211 (576)
T PLN03209        155 PAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGT  211 (576)
T ss_pred             HHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchh
Confidence            222 4699999998741                11233444433  379999998765

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00061  Score=61.59  Aligned_cols=107  Identities=20%  Similarity=0.266  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-E--EEeCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-R--VINYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~--v~~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++.++    ...+.. .  ..|..+ +++.+.+....  -+.+|++|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57899999999999999999998899999999997654    112221 1  233333 23333333221  24689999


Q ss_pred             ECCChH--------------------------HHHHHHHHhc---cCCEEEEEcCcccccCCCCCC
Q 018013          303 ESVGGD--------------------------MFNLCLKALA---VYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       303 d~~g~~--------------------------~~~~~~~~l~---~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      +|.|..                          ..+.+...+.   .+|+||.++......+...+.
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~  146 (252)
T PRK07856         81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTA  146 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCc
Confidence            998720                          1112233333   348999999987765544333

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.65  E-value=0.00093  Score=60.52  Aligned_cols=78  Identities=24%  Similarity=0.362  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. +.+.. ..  .|..+ +++.+.+....  -+.+|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999989999999999988776654 33322 22  23322 22333332221  2469999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      +++.|
T Consensus        85 i~~ag   89 (257)
T PRK07067         85 FNNAA   89 (257)
T ss_pred             EECCC
Confidence            99986

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00035  Score=63.82  Aligned_cols=104  Identities=22%  Similarity=0.301  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHH--CCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEE--FPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~--~~~g~Dvvid~  304 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+..  .+.. ...|..+ +++.+.+...  .-+.+|++|+|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            357899999999999999998888999999999986654322  1222 2234444 3333333332  12469999999


Q ss_pred             CChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          305 VGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       305 ~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      .|..                          ..+.+++.++  ..|+||.+++..+..+
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  138 (270)
T PRK06179         81 AGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP  138 (270)
T ss_pred             CCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC
Confidence            9831                          1222333343  3589999998766544

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.0011  Score=58.98  Aligned_cols=98  Identities=16%  Similarity=0.127  Sum_probs=67.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEE-EeCCC-ccHHHHHHHHCCCceeEEEECCCh-
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRV-INYKA-EDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v-~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      +++|+||+|++|.++++.+...|++|+.+.++.++.+.+. +.+...+ .|..+ +++.+.++... +.+|+++++.|. 
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag~~   80 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPAPS   80 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCCcc
Confidence            5899999999999999999889999999999888776653 4444322 34443 23334433332 358999998651 


Q ss_pred             ---------------H---------------HHHHHHHHhccCCEEEEEcCcc
Q 018013          308 ---------------D---------------MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 ---------------~---------------~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                                     +               ..+..++.|+++|++|.++...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~  133 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN  133 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence                           0               1123344566789999998755

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.64  E-value=0.001  Score=65.09  Aligned_cols=99  Identities=22%  Similarity=0.186  Sum_probs=75.5

Q ss_pred             HHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCc
Q 018013          220 IALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       220 ~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      .++.+...  -.|++|+|.| .|.+|..+++.++.+|++|+++.+++.+...+...|+..+      ++.+.+     ..
T Consensus       242 d~~~R~~~~~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~leell-----~~  309 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------TLEDVV-----ET  309 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------cHHHHH-----hc
Confidence            45444433  6899999999 7999999999999999999999887776655555565321      233332     35


Q ss_pred             eeEEEECCCh-HHH-HHHHHHhccCCEEEEEcCcc
Q 018013          298 FDIIYESVGG-DMF-NLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       298 ~Dvvid~~g~-~~~-~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .|+|+.+.|. ..+ ...++.|++++.++.+|...
T Consensus       310 ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        310 ADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             CCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence            8999999986 444 47899999999999999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.64  E-value=0.00085  Score=60.77  Aligned_cols=112  Identities=21%  Similarity=0.211  Sum_probs=69.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh--HHHHHHHcCCc-EE--EeCCC-ccHHHHHHHH--CCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH--KAQLLKELGVD-RV--INYKA-EDIKTVFKEE--FPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~--~~~~l~~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~D  299 (362)
                      -.|++++|+|++|++|.++++.+...|++|+.++++..  ..+.+++.+.. +.  .|..+ +++.+.+.+.  ..+++|
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999999999999999998866432  22334444432 22  23332 2333333332  124699


Q ss_pred             EEEECCCh-----------H---------------HHHHHHHHhc---cCCEEEEEcCcccccCCCCCC
Q 018013          300 IIYESVGG-----------D---------------MFNLCLKALA---VYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       300 vvid~~g~-----------~---------------~~~~~~~~l~---~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      ++++|+|.           +               ..+.++..+.   ++|++|.+++...+.+...+.
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  156 (253)
T PRK08993         88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP  156 (253)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCc
Confidence            99999873           1               1123344443   258999999887665543333

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.64  E-value=0.00091  Score=60.59  Aligned_cols=106  Identities=20%  Similarity=0.221  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      +++++||+|++|++|..+++.+...|++|+++++++++.+.+    ++.+... .+  |..+ ..+.+.+...  .-+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999988665443    3344432 22  3333 2222222221  12458


Q ss_pred             eEEEECCChH-----------H---------------HHHHHHHh-c--cCCEEEEEcCcccccC
Q 018013          299 DIIYESVGGD-----------M---------------FNLCLKAL-A--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~-----------~---------------~~~~~~~l-~--~~G~~v~~G~~~~~~~  334 (362)
                      |++|.|.|..           .               .+.+++.+ +  ..|+||.++.......
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~  150 (262)
T PRK13394         86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA  150 (262)
T ss_pred             CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC
Confidence            9999998731           0               22345555 3  3579999988655443

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.64  E-value=0.00069  Score=63.86  Aligned_cols=79  Identities=15%  Similarity=0.186  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-----cC-Cc---EEEeCCC--ccHHH-HHHHHCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-----LG-VD---RVINYKA--EDIKT-VFKEEFP  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-----~g-~~---~v~~~~~--~~~~~-~~~~~~~  295 (362)
                      +.|++++|+||++|+|.+.++.+...|++|+++++++++.+.+.+     .+ ..   ...|..+  .+..+ ..+...+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            458999999999999999988888889999999999988766532     22 21   2234432  12222 2222333


Q ss_pred             CceeEEEECCC
Q 018013          296 KGFDIIYESVG  306 (362)
Q Consensus       296 ~g~Dvvid~~g  306 (362)
                      ..+|++++++|
T Consensus       131 ~didilVnnAG  141 (320)
T PLN02780        131 LDVGVLINNVG  141 (320)
T ss_pred             CCccEEEEecC
Confidence            35779999987

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00038  Score=63.28  Aligned_cols=109  Identities=23%  Similarity=0.339  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      ++++||+|++|++|..+++.+...|++|+++++++++.+.+.    ..+... +  .|..+ +.+...+....  -+++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999998899999999999877655432    234322 2  23333 22333333221  14699


Q ss_pred             EEEECCChH-------H--------------------HHHHHHHh-ccCCEEEEEcCcccccCCCCC
Q 018013          300 IIYESVGGD-------M--------------------FNLCLKAL-AVYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       300 vvid~~g~~-------~--------------------~~~~~~~l-~~~G~~v~~G~~~~~~~~~~~  338 (362)
                      ++|+|.|..       .                    ++.+++.+ +..|++|.+++...+.+..++
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  147 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTR  147 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCc
Confidence            999998731       1                    12233333 346899999988776554333

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.0012  Score=59.86  Aligned_cols=78  Identities=19%  Similarity=0.273  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EEEeCCCc-cHHHHHHHHC--CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RVINYKAE-DIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v~~~~~~-~~~~~~~~~~--~~g~Dvvid  303 (362)
                      +|++|+|+||+|++|..+++.+...|++|+++++++.+.+.+. +++.. ...|..+. .+.+.+....  .+++|++++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999999999999999999999887765553 44432 22344442 2333333221  246899999


Q ss_pred             CCC
Q 018013          304 SVG  306 (362)
Q Consensus       304 ~~g  306 (362)
                      ++|
T Consensus        86 ~ag   88 (255)
T PRK06057         86 NAG   88 (255)
T ss_pred             CCC
Confidence            987

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.62  E-value=0.00055  Score=65.77  Aligned_cols=99  Identities=17%  Similarity=0.137  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++.+|+|.| +|.+|+.+++.++.+|++|++++++.++.+.+. .++........+ +++.+.+     ..+|++|++++
T Consensus       166 ~~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l-----~~aDvVI~a~~  239 (370)
T TIGR00518       166 EPGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV-----KRADLLIGAVL  239 (370)
T ss_pred             CCceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH-----ccCCEEEEccc
Confidence            456799998 699999999999999999999999988887775 455432222222 2222222     35899999973


Q ss_pred             ---h--H--HHHHHHHHhccCCEEEEEcCccccc
Q 018013          307 ---G--D--MFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       307 ---~--~--~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                         .  .  .....++.+++++.|+.++.-.+..
T Consensus       240 ~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~  273 (370)
T TIGR00518       240 IPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGC  273 (370)
T ss_pred             cCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCC
Confidence               2  1  2467888899999999998755433

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00061  Score=63.97  Aligned_cols=104  Identities=16%  Similarity=0.206  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc-----CCc-EE--EeCCC-ccHHHHHHHH--CCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL-----GVD-RV--INYKA-EDIKTVFKEE--FPK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~-----g~~-~v--~~~~~-~~~~~~~~~~--~~~  296 (362)
                      .|++++|+||++|+|.++++.+...|++|++++++.++.+.+. ++     +.. .+  .|..+ +++.+.....  ..+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999888889999999999887765442 21     222 12  34433 2233333322  124


Q ss_pred             ceeEEEECCChH-------------------------HHHHHHHHhcc-CCEEEEEcCcccc
Q 018013          297 GFDIIYESVGGD-------------------------MFNLCLKALAV-YGRLIVIGMISQY  332 (362)
Q Consensus       297 g~Dvvid~~g~~-------------------------~~~~~~~~l~~-~G~~v~~G~~~~~  332 (362)
                      .+|++|+++|..                         ..+.++..|+. .|++|.+++....
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~  154 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAAR  154 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhc
Confidence            699999998720                         12234444543 5899999887653

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.001  Score=59.66  Aligned_cols=108  Identities=18%  Similarity=0.198  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHH----HHHHcCCc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQ----LLKELGVD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~----~l~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      .++++++|+|++|++|..+++.+...|++|+.+.++.. +.+    .++..+.. ..+  |..+ +++.+.++...  -+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999888776433 222    22333432 222  2222 22333333221  24


Q ss_pred             ceeEEEECCChH--------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGGD--------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|++.|..                          .++.+++.++..|+|+.++......+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~  147 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL  147 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC
Confidence            699999998720                          123445566677999999876655443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.62  E-value=0.00011  Score=72.56  Aligned_cols=96  Identities=21%  Similarity=0.182  Sum_probs=70.2

Q ss_pred             hCC-CCCCEEE----EEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCce
Q 018013          225 AGP-ASGKKVL----VTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       225 ~~~-~~g~~Vl----I~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      +.+ ++|+.+|    |+||+|++|.+++|+++..|++|+++.+.+.+....+..+.+ .++|.+.....+.+...     
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~-----  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKAL-----  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHH-----
Confidence            445 8899998    999999999999999999999999998776655444444554 46666543332222211     


Q ss_pred             eEEEECCChHHHHHHHHHhccCCEEEEEcCccccc
Q 018013          299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       299 Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                              .+.++..++.|.++|+||.++......
T Consensus       103 --------~~~~~~~l~~l~~~griv~i~s~~~~~  129 (450)
T PRK08261        103 --------YEFFHPVLRSLAPCGRVVVLGRPPEAA  129 (450)
T ss_pred             --------HHHHHHHHHhccCCCEEEEEccccccC
Confidence                    145677889999999999999877643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.62  E-value=0.0013  Score=59.56  Aligned_cols=105  Identities=16%  Similarity=0.104  Sum_probs=66.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H----cCC--cEEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E----LGV--DRVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~----~g~--~~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ++++||+|++|++|.+++..+...|++|+.++++..+.+.+. +    .+.  -+.+  |..+ +++...+.+..  -++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999998889999999998876654442 1    221  1222  3332 22333333221  146


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHhcc---CCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKALAV---YGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l~~---~G~~v~~G~~~~~~~  334 (362)
                      +|+++++.|.           +.               .+.+++.+..   .|++|.++......+
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~  147 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG  147 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC
Confidence            8999999872           11               2244455532   479999988665333

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.0012  Score=58.51  Aligned_cols=76  Identities=20%  Similarity=0.313  Sum_probs=55.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE--EeCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV--INYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v--~~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++++|+|++|++|..++..+...|++|+++++++++.+.+++++-..+  .|..+ +++.+......++++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            579999999999999998888889999999998877666655432222  34333 23444444444457999999876

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.0011  Score=60.26  Aligned_cols=77  Identities=18%  Similarity=0.189  Sum_probs=52.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCC--c-EE--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGV--D-RV--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~--~-~v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      +++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ +..  . ..  .|..+ +++.+.+....  -+.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4689999999999999998888889999999998887665532 211  1 12  23333 22333333221  135899


Q ss_pred             EEECCC
Q 018013          301 IYESVG  306 (362)
Q Consensus       301 vid~~g  306 (362)
                      +++++|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999987

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.0011  Score=60.72  Aligned_cols=107  Identities=17%  Similarity=0.189  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cC--Cc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LG--VD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g--~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+. +   .+  .. .++  |..+ +++...++...  .+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999877654442 2   21  11 222  3333 22333333221  24


Q ss_pred             ceeEEEECCChH---------------------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGGD---------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~~---------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|++.|..                           .++.+++.+  +..|+|+.+++.......
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~  153 (276)
T PRK05875         86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH  153 (276)
T ss_pred             CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence            689999998721                           112233444  235799999887765543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.60  E-value=0.00097  Score=60.94  Aligned_cols=111  Identities=23%  Similarity=0.271  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHh---HHHHHHH-cCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEH---KAQLLKE-LGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~---~~~~l~~-~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .|++++|+||++  |+|.++++.+...|++|+.+.+++.   ..+.+.. .+....  .|..+ +++.+.+....  -+.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            478999999875  8999999888889999998887632   2233322 222222  23333 33333333321  145


Q ss_pred             eeEEEECCChH-------------------------------HHHHHHHHhccCCEEEEEcCcccccCCCCCC
Q 018013          298 FDIIYESVGGD-------------------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       298 ~Dvvid~~g~~-------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      +|++++|+|-.                               ..+.+...++++|++|.+++.........+.
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~  157 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYN  157 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcc
Confidence            99999999720                               0112334456789999998877654433333

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.59  E-value=0.0013  Score=59.52  Aligned_cols=107  Identities=22%  Similarity=0.296  Sum_probs=69.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+++++|+|++|++|..+++.+...|++|+.+.+++++.+.+    ++.+.. ..  .|..+ +++.+.+....  -+.
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999998888999999999987765443    233432 12  24333 22333333221  146


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~  334 (362)
                      +|+++++.|..                          ..+.+++.+  ...|+||.++.......
T Consensus        89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~  153 (256)
T PRK06124         89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA  153 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC
Confidence            89999998831                          112233444  34689999988766444

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.58  E-value=0.0016  Score=60.52  Aligned_cols=78  Identities=26%  Similarity=0.393  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+.    +.+.. ..  .|..+ +++.+.+...  .-+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988888999999999987766553    23332 22  23333 2233333322  12469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++++|+|
T Consensus       119 d~li~~AG  126 (293)
T PRK05866        119 DILINNAG  126 (293)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK06196 oxidoreductase; Provisional

Probab=97.57  E-value=0.00071  Score=63.50  Aligned_cols=104  Identities=22%  Similarity=0.322  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcC-Cc-EEEeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELG-VD-RVINYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g-~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      -.+++++|+||+|++|.+++..+...|++|++++++.++.+.+. ++. +. ...|..+ +++.+.+....  .+++|++
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            35789999999999999999988889999999999887765543 222 22 1234333 23333333322  2569999


Q ss_pred             EECCCh---------H---------------HHHHHHHHhcc--CCEEEEEcCccc
Q 018013          302 YESVGG---------D---------------MFNLCLKALAV--YGRLIVIGMISQ  331 (362)
Q Consensus       302 id~~g~---------~---------------~~~~~~~~l~~--~G~~v~~G~~~~  331 (362)
                      |+++|.         +               ..+..+..++.  +|++|.+++...
T Consensus       104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~  159 (315)
T PRK06196        104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGH  159 (315)
T ss_pred             EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHh
Confidence            999872         0               12334444543  379999987644

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.56  E-value=0.0012  Score=59.05  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=52.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHHHHHcCCcE-EEeCCC-ccHHHHHHHHC--CCceeEEEEC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQLLKELGVDR-VINYKA-EDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~l~~~g~~~-v~~~~~-~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      ++++||+|+++++|.++++.+...|++|+++++++++ .+.+++.++.. ..|..+ +++.+.+....  -+++|+++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            5789999999999999999888899999999987653 33344555432 233333 23333333321  1369999999


Q ss_pred             CC
Q 018013          305 VG  306 (362)
Q Consensus       305 ~g  306 (362)
                      .|
T Consensus        82 ag   83 (236)
T PRK06483         82 AS   83 (236)
T ss_pred             Cc
Confidence            87

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.0013  Score=59.44  Aligned_cols=111  Identities=17%  Similarity=0.227  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+|++|++|..+++.+...|++|+.+++++++.+.+    ++.+.. ..  .|..+ .++.+.+...  .-+.+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999988888999999999987765433    333432 22  23333 2233322222  11368


Q ss_pred             eEEEECCChH------------HH---------------HHHHHHh--ccCCEEEEEcCcccccCCCCCC
Q 018013          299 DIIYESVGGD------------MF---------------NLCLKAL--AVYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       299 Dvvid~~g~~------------~~---------------~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      |+++++.|..            .+               +..+..+  ...|+++.++......+...+.
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~  155 (253)
T PRK06172         86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMS  155 (253)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCc
Confidence            9999998730            11               1223333  2358999998877665544443

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.0018  Score=57.92  Aligned_cols=106  Identities=21%  Similarity=0.220  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC-c---EEEeCCC---ccHHH---HHHHHC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV-D---RVINYKA---EDIKT---VFKEEF  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~-~---~v~~~~~---~~~~~---~~~~~~  294 (362)
                      ++++++|+|++|++|..+++.+...|++|+++++++++.+.+.    +.+. +   ...|..+   +++.+   .+....
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4689999999999999999998889999999999887765542    2221 1   1233321   22322   222223


Q ss_pred             CCceeEEEECCChH---------------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          295 PKGFDIIYESVGGD---------------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       295 ~~g~Dvvid~~g~~---------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      .+.+|++|+++|..                           .++.+++.+..  .|+++.++......+
T Consensus        85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  153 (239)
T PRK08703         85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP  153 (239)
T ss_pred             CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC
Confidence            24689999998830                           12233444433  589999988665544

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.0013  Score=59.39  Aligned_cols=114  Identities=18%  Similarity=0.198  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+++++|+|++|++|.++++.+...|++|+.++++.++.+.+.    +.+.. +.+  |..+ .++.+.+....  -+.
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999989999999999877665543    23332 222  3332 22333332221  135


Q ss_pred             eeEEEECCChH---------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCCCCC
Q 018013          298 FDIIYESVGGD---------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGWQPS  341 (362)
Q Consensus       298 ~Dvvid~~g~~---------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~~~  341 (362)
                      +|+++++.|..                           ..+.+++.+.  ..|+++.++......+...+..+
T Consensus        86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  158 (252)
T PRK07035         86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIY  158 (252)
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcch
Confidence            89999998720                           1123334443  34899999887665444334433

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.56  E-value=0.0013  Score=59.31  Aligned_cols=110  Identities=20%  Similarity=0.204  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHH----HHHHHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKA----QLLKELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~----~~l~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+|++|..+++.+...|++|+.+.++ .++.    ..+++.+.. ..  .|..+ .++...+....  -.+
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999998888899998877653 2222    222334433 22  23333 22222222221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccccCCCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~  338 (362)
                      +|++|++.|.           +               ..+.+.+.++..|+||.+++...+.+..++
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  151 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGL  151 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCc
Confidence            9999999972           0               123455666778999999998876654433

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.56  E-value=0.0013  Score=59.64  Aligned_cols=104  Identities=20%  Similarity=0.188  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHHHHcCCcE-EEeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLLKELGVDR-VINYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l~~~g~~~-v~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      .+++++|+|++|++|.++++.+...|++|+++.++ ++..+.+++.++.. ..|..+ +++.+.+....  -+++|++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999988899999887654 33444454444432 234443 23333333221  246999999


Q ss_pred             CCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccc
Q 018013          304 SVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQY  332 (362)
Q Consensus       304 ~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~  332 (362)
                      |.|..                          ..+.+++.+.  .+|++|.+++...+
T Consensus        86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~  142 (255)
T PRK06463         86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGI  142 (255)
T ss_pred             CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhC
Confidence            98730                          1234455554  46899999987654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.55  E-value=0.0017  Score=58.63  Aligned_cols=108  Identities=23%  Similarity=0.229  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+.    ..+.. +.  .|..+ +++.+.+....  .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988888999999999887665442    22332 22  23333 22333332221  2469


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      |++|.+++..                          ..+.++..++  ..++||.+++.....+..
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~  148 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSA  148 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC
Confidence            9999988720                          1233445553  457999998876554433

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00094  Score=60.77  Aligned_cols=79  Identities=23%  Similarity=0.318  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc--CCc-EE--EeCCC-ccHHHHHHHHC-CCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL--GVD-RV--INYKA-EDIKTVFKEEF-PKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~--g~~-~v--~~~~~-~~~~~~~~~~~-~~g~Dv  300 (362)
                      ++++++|+||+|++|..+++.+...|++|+++++++++.+.+. ++  +.. +.  .|..+ +++.+...... .+.+|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4689999999999999999988889999999999988776654 22  211 22  23333 22222222221 256899


Q ss_pred             EEECCCh
Q 018013          301 IYESVGG  307 (362)
Q Consensus       301 vid~~g~  307 (362)
                      +++++|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999873

>PLN02253 xanthoxin dehydrogenase

Probab=97.55  E-value=0.0019  Score=59.32  Aligned_cols=78  Identities=24%  Similarity=0.264  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC--c-E--EEeCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV--D-R--VINYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~--~-~--v~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. +++.  . +  ..|..+ +.+.+.+....  -+++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999888889999999998776655443 3321  1 1  234443 22333222211  14699


Q ss_pred             EEEECCC
Q 018013          300 IIYESVG  306 (362)
Q Consensus       300 vvid~~g  306 (362)
                      ++++++|
T Consensus        97 ~li~~Ag  103 (280)
T PLN02253         97 IMVNNAG  103 (280)
T ss_pred             EEEECCC
Confidence            9999987

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.55  E-value=0.0018  Score=58.80  Aligned_cols=75  Identities=27%  Similarity=0.334  Sum_probs=51.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEE--EeCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRV--INYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v--~~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      +++|+|+++++|.++++.+...|++|+++++++++.+.+.    +.+..+.  .|..+ +++.+.+....  -+++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6899999999999999998889999999999887765442    2232222  23333 23333333321  24699999


Q ss_pred             ECCC
Q 018013          303 ESVG  306 (362)
Q Consensus       303 d~~g  306 (362)
                      ++.|
T Consensus        82 ~naG   85 (259)
T PRK08340         82 WNAG   85 (259)
T ss_pred             ECCC
Confidence            9987

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.55  E-value=0.0011  Score=60.07  Aligned_cols=108  Identities=24%  Similarity=0.299  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.++++||+||++++|.++++.+...|++|++++++ ++.+.+    .+.+.. .+  .|..+ +++.+.+.+..  .++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999998999999999887 333333    233432 22  23333 22333333221  246


Q ss_pred             eeEEEECCChH-----------H---------------HHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGGD-----------M---------------FNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      +|+++++.|..           .               .+.+++.+..  .|+++.++....+.+..
T Consensus        92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (258)
T PRK06935         92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK  158 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC
Confidence            89999998730           1               1233344433  58999999987665543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.54  E-value=0.0014  Score=58.87  Aligned_cols=106  Identities=20%  Similarity=0.229  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ++++++|+||+|++|..++..+...|++|++. .++.++.+.+    ++.+.. ..  .|..+ +++...+....  -++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999998764 6666554433    333443 22  23333 22333333221  146


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++|++.|..                          ..+.+++.+.  ..|+||.+++......
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  147 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY  147 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence            89999998720                          1233444443  3579999988765443

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=97.53  E-value=3.3e-05  Score=62.21  Aligned_cols=49  Identities=39%  Similarity=0.714  Sum_probs=37.9

Q ss_pred             cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC--hHHH-HHHHHHhccCCEEEEEcC
Q 018013          273 LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG--GDMF-NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       273 ~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g--~~~~-~~~~~~l~~~G~~v~~G~  328 (362)
                      +|+++++||++.++      ..++++|+|||++|  ++.+ ..++++| ++|++|.+|.
T Consensus         1 LGAd~vidy~~~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~   52 (127)
T PF13602_consen    1 LGADEVIDYRDTDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG   52 (127)
T ss_dssp             CT-SEEEETTCSHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred             CCcCEEecCCCccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence            68999999997776      44678999999999  7554 7788888 9999999985

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0019  Score=58.61  Aligned_cols=104  Identities=21%  Similarity=0.284  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-----cCCc-EE--EeCCC-ccHHHHHHHHCCCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-----LGVD-RV--INYKA-EDIKTVFKEEFPKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-----~g~~-~v--~~~~~-~~~~~~~~~~~~~g~D  299 (362)
                      .+++++|+|+++++|..+++.+...|++|++++++.++.+.+.+     .+.. +.  .|..+ +++.+.++. . +.+|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-~-g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE-A-GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH-h-CCCC
Confidence            57899999999999999999888899999999998877655432     2322 22  23333 223333332 2 4699


Q ss_pred             EEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      ++++|.|..                          ..+.+++.|..  .|++|.++......+
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~  146 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP  146 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC
Confidence            999998730                          12234555543  489998887665433

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.52  E-value=0.00046  Score=58.01  Aligned_cols=104  Identities=26%  Similarity=0.361  Sum_probs=67.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCC--HhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGG--EHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~--~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ++++|+||++++|.++++.+...|+ +|+.+.++  .++.+.+    +..+.. .++  |..+ +++.+.++...  ...
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5799999999999998888877777 78888887  4444433    334532 223  3222 33444444332  356


Q ss_pred             eeEEEECCCh-----------HHHH---------------HHHHHhccCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------DMFN---------------LCLKALAVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~~~---------------~~~~~l~~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++|+|.|.           +.+.               ..+.  +.+|+||.++...+..+.+
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~  143 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSP  143 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSST
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCC
Confidence            9999999883           1111               2222  4789999999988876643

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.52  E-value=0.0019  Score=59.84  Aligned_cols=97  Identities=15%  Similarity=0.182  Sum_probs=72.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++++|.| .|.+|.+++..++.+|++|+++.++.++.+.+.++|...+ ..  .++.+.+     .+.|+||+++..
T Consensus       149 l~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~~--~~l~~~l-----~~aDiVint~P~  219 (287)
T TIGR02853       149 IHGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-PL--NKLEEKV-----AEIDIVINTIPA  219 (287)
T ss_pred             CCCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-cH--HHHHHHh-----ccCCEEEECCCh
Confidence            4689999999 6999999999999999999999999888777776665322 11  1222221     358999999975


Q ss_pred             HHH-HHHHHHhccCCEEEEEcCccccc
Q 018013          308 DMF-NLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       308 ~~~-~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                      ..+ ...++.++++..++.++...+..
T Consensus       220 ~ii~~~~l~~~k~~aliIDlas~Pg~t  246 (287)
T TIGR02853       220 LVLTADVLSKLPKHAVIIDLASKPGGT  246 (287)
T ss_pred             HHhCHHHHhcCCCCeEEEEeCcCCCCC
Confidence            443 35677889999999998866543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=97.51  E-value=0.0026  Score=57.99  Aligned_cols=108  Identities=19%  Similarity=0.205  Sum_probs=69.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+++++|+|+++++|..++..+...|++|+++.+++++.+.+.    +.+.. ..  .|..+ +.+.+.+.+..  -+.
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999888889999999998877665442    33433 22  33333 22333332221  146


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++|.|.           +.               .+.++..+.  ..|+||.++......+.
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (265)
T PRK07097         88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR  153 (265)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC
Confidence            9999999873           11               112344442  46899999987654443

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.0019  Score=58.52  Aligned_cols=105  Identities=16%  Similarity=0.135  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HH----HHHHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQ----LLKELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~----~l~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+|+++++|.++++.+...|++|++++++.++ .+    .+++.+.. ..  .|..+ +++.+.+....  -+.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999886432 22    22333432 22  23333 23333333221  246


Q ss_pred             eeEEEECCChH-----------H---------------HHHHHHHh--ccCCEEEEEcCccccc
Q 018013          298 FDIIYESVGGD-----------M---------------FNLCLKAL--AVYGRLIVIGMISQYQ  333 (362)
Q Consensus       298 ~Dvvid~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~G~~~~~~  333 (362)
                      +|++|+|.|..           .               .+..++.+  +..|+||.+++..+..
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  150 (254)
T PRK06114         87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII  150 (254)
T ss_pred             CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcC
Confidence            99999998731           1               12233434  2358999998876543

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.0016  Score=58.55  Aligned_cols=106  Identities=16%  Similarity=0.204  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-c--CCc-EEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-L--GVD-RVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~--g~~-~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+...+ .  +.. ..+  |..+ +++.+.+....  -+++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999998888889999999998776554432 2  322 222  3333 22333333221  24699


Q ss_pred             EEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      ++++|.|..                          ..+.++..++  ..|+|+.+++.....+
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~  146 (252)
T PRK06138         84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG  146 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC
Confidence            999998831                          1123334443  3579999998765433

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.50  E-value=0.0031  Score=56.77  Aligned_cols=78  Identities=26%  Similarity=0.348  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHHH-HcCCc-EEE--eCCC-ccHHHHHHH---HCCCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLLK-ELGVD-RVI--NYKA-EDIKTVFKE---EFPKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l~-~~g~~-~v~--~~~~-~~~~~~~~~---~~~~g~D  299 (362)
                      .+++++|+||+|++|..++..+...|++|+.+.+ +.++.+.+. +++.. .++  |..+ +++.+.+..   ..+.++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3578999999999999999988889999988754 444444443 34322 122  3333 223333322   2344599


Q ss_pred             EEEECCC
Q 018013          300 IIYESVG  306 (362)
Q Consensus       300 vvid~~g  306 (362)
                      ++|++.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999875

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.0022  Score=58.72  Aligned_cols=76  Identities=20%  Similarity=0.254  Sum_probs=53.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCc-E--EEeCCC-ccHHHHHHHH--CCCceeEEEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVD-R--VINYKA-EDIKTVFKEE--FPKGFDIIYE  303 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~-~--v~~~~~-~~~~~~~~~~--~~~g~Dvvid  303 (362)
                      +++||+||+|++|..+++.+...|++|+++++++++.+.+++ .+.. .  ..|..+ +.+.+.+...  ..+++|++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            579999999999999998888899999999999887776654 2322 1  233333 2233333221  1246899999


Q ss_pred             CCC
Q 018013          304 SVG  306 (362)
Q Consensus       304 ~~g  306 (362)
                      ++|
T Consensus        83 ~ag   85 (276)
T PRK06482         83 NAG   85 (276)
T ss_pred             CCC
Confidence            987

>PRK12746 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.0026  Score=57.42  Aligned_cols=112  Identities=23%  Similarity=0.282  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH-HH---cCCc-EEE--eCCC-ccHHHHHHHH---C--
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL-KE---LGVD-RVI--NYKA-EDIKTVFKEE---F--  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l-~~---~g~~-~v~--~~~~-~~~~~~~~~~---~--  294 (362)
                      .+++++|+|++|++|..+++.+...|++|++. .++.++.+.+ .+   .+.. +++  |..+ +++.+.++..   .  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            46899999999999999999888889998775 5666554333 22   2322 222  3333 2233333322   1  


Q ss_pred             ---CCceeEEEECCChH-----------H---------------HHHHHHHhccCCEEEEEcCcccccCCCCCCC
Q 018013          295 ---PKGFDIIYESVGGD-----------M---------------FNLCLKALAVYGRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       295 ---~~g~Dvvid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~  340 (362)
                         ..++|++|++.|..           .               .+.+++.+...|+||.++....+.+...+..
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~  159 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIA  159 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcc
Confidence               14699999998730           0               1223345566789999988776555444433

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.50  E-value=0.002  Score=59.17  Aligned_cols=108  Identities=24%  Similarity=0.308  Sum_probs=71.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc------EEEeCCC-ccHHHHHHH---H
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD------RVINYKA-EDIKTVFKE---E  293 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~------~v~~~~~-~~~~~~~~~---~  293 (362)
                      -.|+.++|+|++.|+|.+.+..+...|++|+++.+++++.+....    .+..      ...|..+ ++..+.+..   .
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999888766532    2221      2233333 223333222   2


Q ss_pred             CCCceeEEEECCChH------------HH----------------HHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          294 FPKGFDIIYESVGGD------------MF----------------NLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       294 ~~~g~Dvvid~~g~~------------~~----------------~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ..+++|+++|+.|..            .+                +.+...+.  .+|.++.+.........
T Consensus        86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~  157 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG  157 (270)
T ss_pred             hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC
Confidence            245699999998831            11                12223333  47899988888776553

>PRK09186 flagellin modification protein A; Provisional

Probab=97.50  E-value=0.0013  Score=59.39  Aligned_cols=78  Identities=21%  Similarity=0.184  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc----CCc---E-EEeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL----GVD---R-VINYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~----g~~---~-v~~~~~-~~~~~~~~~~~--~~  296 (362)
                      ++++++|+|++|++|..++..+...|++|+++++++++.+.+. ++    +..   . ..|..+ +++.+.+....  -+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999887765442 22    222   1 224433 22333333321  14


Q ss_pred             ceeEEEECCC
Q 018013          297 GFDIIYESVG  306 (362)
Q Consensus       297 g~Dvvid~~g  306 (362)
                      ++|++++|++
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            5999999985

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0021  Score=58.04  Aligned_cols=78  Identities=21%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-E--EEeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-R--VINYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~--v~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+.    ..+.. .  ..|..+ +++.+.+....  -+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999887766553    22322 1  233333 22333333221  1469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++++|.|
T Consensus        88 d~lv~~ag   95 (253)
T PRK05867         88 DIAVCNAG   95 (253)
T ss_pred             CEEEECCC
Confidence            99999987

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.48  E-value=0.0021  Score=57.76  Aligned_cols=108  Identities=17%  Similarity=0.224  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +++++||+||+|++|..+++.+...|++|+.++++.++.+.+.    +.+.. .++  |..+ +.+.+.+....  -+++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999877665543    22322 222  3322 22333333221  2468


Q ss_pred             eEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          299 DIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       299 Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      |++|.+.|.           +.               .+.++..+.  ..++|+.++....+....
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~  147 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS  147 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC
Confidence            999999972           00               112344443  357999999987765543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.47  E-value=0.01  Score=55.10  Aligned_cols=161  Identities=16%  Similarity=0.145  Sum_probs=97.8

Q ss_pred             EEEEEeCCCCCCCCCCCeEEEecC--------------CC--------------eeeEEEeeCCCeeeCCCCCHHHHHhh
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIMTF--------------GS--------------YAEFTMVPSKHILPVARPDPEVVAML  212 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~~~--------------g~--------------~~~~~~v~~~~~~~ip~~~~~~a~l~  212 (362)
                      ++|++  |.+.++.+|.||.++.+              ++              |-+|.++..+..+. | +.++.-++.
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~-~-~~e~~~~Ll  114 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD-P-EREDWQMLL  114 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC-c-chhHHHHHH
Confidence            55555  77788999999999753              11              12222222221110 0 122333444


Q ss_pred             hhHHHHHHHHHHhCC----CCCCEEEEEcCCchHHHHHHHHHH-HCC-CEEEEecCCHhHHHHHHHcCC-cEEEeCCCcc
Q 018013          213 TSGLTASIALEQAGP----ASGKKVLVTAAAGGTGQFAVQLAK-LAG-NTVVATCGGEHKAQLLKELGV-DRVINYKAED  285 (362)
Q Consensus       213 ~~~~tA~~al~~~~~----~~g~~VlI~ga~g~vG~~aiqla~-~~G-~~Vi~~~~~~~~~~~l~~~g~-~~v~~~~~~~  285 (362)
                      -++...-+.|.+...    -..+.|+|.+|++-+++.++..++ ..+ .+++.+++. ....+.+.+|. |.++.|++-+
T Consensus       115 rPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~-~N~~Fve~lg~Yd~V~~Yd~i~  193 (314)
T PF11017_consen  115 RPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSA-RNVAFVESLGCYDEVLTYDDID  193 (314)
T ss_pred             HHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecC-cchhhhhccCCceEEeehhhhh
Confidence            444444445544333    345889999999999999998888 444 489998874 45568888997 7888886422


Q ss_pred             HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCC-EEEEEcCcccc
Q 018013          286 IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYG-RLIVIGMISQY  332 (362)
Q Consensus       286 ~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G-~~v~~G~~~~~  332 (362)
                            ......--+++|..|+ +......+.++..= ..+.+|.....
T Consensus       194 ------~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~  236 (314)
T PF11017_consen  194 ------SLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWD  236 (314)
T ss_pred             ------hccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCcc
Confidence                  1222345689999996 45555556665542 56667765543

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.46  E-value=9e-05  Score=75.36  Aligned_cols=75  Identities=27%  Similarity=0.438  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC---------------------HhHHHHHHHcCCcEEEeCCC-cc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG---------------------EHKAQLLKELGVDRVINYKA-ED  285 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~---------------------~~~~~~l~~~g~~~v~~~~~-~~  285 (362)
                      ++|++|+|.| +|+.|+.+++.++..|++|++++..                     +.+.+.++++|++..++... .+
T Consensus       135 ~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~  213 (564)
T PRK12771        135 DTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED  213 (564)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence            6899999999 7999999999999999999998742                     34566778899987776543 22


Q ss_pred             H-HHHHHHHCCCceeEEEECCCh
Q 018013          286 I-KTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       286 ~-~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      + .+..    ..++|+||+++|.
T Consensus       214 ~~~~~~----~~~~D~Vi~AtG~  232 (564)
T PRK12771        214 ITLEQL----EGEFDAVFVAIGA  232 (564)
T ss_pred             CCHHHH----HhhCCEEEEeeCC
Confidence            1 1111    2368999999995

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.46  E-value=0.0029  Score=57.28  Aligned_cols=111  Identities=18%  Similarity=0.231  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+|+++++|..++..+...|++|+.++++.++.+.+    ++.+.+ ++  .|..+ +++.+.+...  .-+++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999998888999999999887766544    233433 22  33333 2233332222  12468


Q ss_pred             eEEEECCCh----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCCC
Q 018013          299 DIIYESVGG----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       299 Dvvid~~g~----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      |++++|.|.          +               ..+.++..+.  ..|+||.+++.....+...+.
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  157 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT  157 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcc
Confidence            999999872          1               1122333343  347999999987765544443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.45  E-value=0.0019  Score=58.15  Aligned_cols=102  Identities=20%  Similarity=0.237  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      .++++||+|++|++|..+++.+...|++|++++++.     +...+.. ..  .|..+ +.+.+.+....  .+.+|++|
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV   81 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999999999888999999999875     2222222 12  23333 22333333221  24589999


Q ss_pred             ECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          303 ESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       303 d~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      ++.|..                          ..+.++..+  +..|+|+.++......+.
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~  142 (252)
T PRK08220         82 NAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR  142 (252)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC
Confidence            998731                          123334444  345899999887654443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.45  E-value=0.00046  Score=56.45  Aligned_cols=96  Identities=20%  Similarity=0.257  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcCCc--EEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELGVD--RVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      -.+++++|.| +|++|.+++..+...|+ +|+++.|+.+|.+.+. +++..  .++++.+  +.+.+     ..+|+||+
T Consensus        10 l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~~~~-----~~~DivI~   81 (135)
T PF01488_consen   10 LKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LEEAL-----QEADIVIN   81 (135)
T ss_dssp             GTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HCHHH-----HTESEEEE
T ss_pred             cCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HHHHH-----hhCCeEEE
Confidence            4689999999 69999999999999999 5999999999988775 45322  3344432  22222     35999999


Q ss_pred             CCChHHHHHHHHHhccC----CEEEEEcCccc
Q 018013          304 SVGGDMFNLCLKALAVY----GRLIVIGMISQ  331 (362)
Q Consensus       304 ~~g~~~~~~~~~~l~~~----G~~v~~G~~~~  331 (362)
                      |++.......-..+...    +.++.++.+..
T Consensus        82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~  113 (135)
T PF01488_consen   82 ATPSGMPIITEEMLKKASKKLRLVIDLAVPRD  113 (135)
T ss_dssp             -SSTTSTSSTHHHHTTTCHHCSEEEES-SS-S
T ss_pred             ecCCCCcccCHHHHHHHHhhhhceeccccCCC
Confidence            98853221112223333    68888876544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05855 short chain dehydrogenase; Validated

Probab=97.44  E-value=0.0014  Score=66.47  Aligned_cols=114  Identities=19%  Similarity=0.189  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+.++||+||+|++|..+++.+...|++|++++++.++.+.+.    +.|.. .+  .|..+ +.+.+.+....  .+.
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            34689999999999999999888889999999999887766543    33442 22  23333 22333333321  246


Q ss_pred             eeEEEECCChH-----------HH---------------HHHHHHhcc---CCEEEEEcCcccccCCCCCCCC
Q 018013          298 FDIIYESVGGD-----------MF---------------NLCLKALAV---YGRLIVIGMISQYQGEHGWQPS  341 (362)
Q Consensus       298 ~Dvvid~~g~~-----------~~---------------~~~~~~l~~---~G~~v~~G~~~~~~~~~~~~~~  341 (362)
                      +|++++|+|..           .+               +..+..+..   +|+||.+++...+.+...+..+
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  465 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAY  465 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHH
Confidence            99999998731           11               122333332   4899999998887665444444

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.44  E-value=0.0014  Score=61.15  Aligned_cols=39  Identities=15%  Similarity=0.195  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCCHhHH
Q 018013          228 ASGKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGGEHKA  267 (362)
Q Consensus       228 ~~g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~~~~~  267 (362)
                      -.|+++||+|+  ++|+|.++++.+...|++|++ +++..++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            35899999999  799999999999999999988 4444443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=97.44  E-value=0.0041  Score=55.82  Aligned_cols=115  Identities=25%  Similarity=0.293  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+|++|++|..++..+...|++|+++.+ ++++.+.+    ++.+... .+  |..+ +.+.+.+....  -+.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999988889999987654 33433322    2334332 22  2222 22333332221  135


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHh--ccCCEEEEEcCcccccCCCCCCCCCh
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKAL--AVYGRLIVIGMISQYQGEHGWQPSNY  343 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~~~~~  343 (362)
                      +|++|.|+|.           +.               ++.+++.+  ...|+||.+++.....+..++..+..
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  158 (247)
T PRK12935         85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSA  158 (247)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHH
Confidence            8999999873           11               11223333  34689999998766554444544443

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.43  E-value=0.0025  Score=56.98  Aligned_cols=78  Identities=21%  Similarity=0.313  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+    +..+.. .++  |..+ .++.+.++...  -+++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            468899999999999999998888999999999987765543    223322 122  2222 22333333221  2469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|++.|
T Consensus        86 d~vi~~ag   93 (239)
T PRK07666         86 DILINNAG   93 (239)
T ss_pred             cEEEEcCc
Confidence            99999987

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.43  E-value=0.0031  Score=56.36  Aligned_cols=106  Identities=28%  Similarity=0.418  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      ++++++|+|++|++|..+++.+...|+.|+...++.++.+.+. ..+.. .+  .|..+ +.+.+.+.+..  -+++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999998889999999888877766553 34432 22  23332 22333222221  2469999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccC
Q 018013          302 YESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~  334 (362)
                      |+|.|.           +               ..+.+++.+  +..|+||.+++.....+
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  145 (245)
T PRK12936         85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG  145 (245)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcC
Confidence            999872           0               112233223  35689999988765443

>PRK08264 short chain dehydrogenase; Validated

Probab=97.42  E-value=0.0026  Score=56.73  Aligned_cols=74  Identities=23%  Similarity=0.270  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCc-EE--EeCCC-ccHHHHHHHHCCCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVD-RV--INYKA-EDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~-~v--~~~~~-~~~~~~~~~~~~~g~Dvvid  303 (362)
                      .+++++|+||+|++|..+++.+...|+ +|++++++.++.+.   .+.. .+  .|..+ +++.+.++..  +.+|++|.
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~   79 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN   79 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence            568999999999999999999999999 99999998766543   2222 22  23333 2233333221  35899999


Q ss_pred             CCCh
Q 018013          304 SVGG  307 (362)
Q Consensus       304 ~~g~  307 (362)
                      +.|.
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            9875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.41  E-value=0.0031  Score=57.47  Aligned_cols=106  Identities=21%  Similarity=0.267  Sum_probs=67.6

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCC---HhHHHHH-HHcCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGG---EHKAQLL-KELGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~---~~~~~~l-~~~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||  ++++|.++++.+...|++|+.+.+.   +++.+.+ ++++....  .|..+ +++.+.+....  -+.
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  5799999998888899999987543   3333333 23443222  33333 33444443332  146


Q ss_pred             eeEEEECCChH-------------------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD-------------------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~-------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +|++++|.|..                               ..+.+++.|+..|++|.++.......
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~  152 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV  152 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC
Confidence            99999998620                               11234556677799999988766444

>PRK07069 short chain dehydrogenase; Validated

Probab=97.41  E-value=0.002  Score=57.90  Aligned_cols=111  Identities=17%  Similarity=0.253  Sum_probs=69.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHHH-Hc----CCc--E--EEeCCC-ccHHHHHHHHC--CCce
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLLK-EL----GVD--R--VINYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l~-~~----g~~--~--v~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +++|+|++|++|..+++.+...|++|++++++ .++.+.+. ++    +..  +  ..|..+ +.+.+.+....  -+++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999999888899999999987 55544442 21    221  1  124333 33333333221  2469


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCCCCCCCCC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGEHGWQPSN  342 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~~~~~~~  342 (362)
                      |+++++.|..                          ..+.+++.++.  .|+|+.++..........+..+.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~  152 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYN  152 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhH
Confidence            9999998721                          12344555543  48999999887765544444333

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.39  E-value=0.0014  Score=58.84  Aligned_cols=106  Identities=25%  Similarity=0.381  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHH----HHHHHcCCcEE---EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKA----QLLKELGVDRV---INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~----~~l~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ++++++|+|++|++|..+++.+...|++|++..+ +..+.    +.+++.+....   .|..+ +++.+.+.+..  .++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999888643 22222    22233454432   23333 22333332221  246


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      +|++++|.|..                          ..+..++.+..  .|+||.++......+
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  146 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG  146 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC
Confidence            99999998731                          12234444433  379999988765444

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=97.38  E-value=0.0033  Score=57.08  Aligned_cols=112  Identities=15%  Similarity=0.158  Sum_probs=68.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHHH----HHHcCCc-EE--EeCCC-ccHHHHHHHH--CCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQL----LKELGVD-RV--INYKA-EDIKTVFKEE--FPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~~----l~~~g~~-~v--~~~~~-~~~~~~~~~~--~~~  296 (362)
                      -++++++|+||+|++|..+++.+...|++|+++.++. ++.+.    ++..+.. ..  .|..+ +++.+.+...  ..+
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999998887743 22222    2233432 12  23333 2233333222  124


Q ss_pred             ceeEEEECCCh-----------HH---------------HHHHHHHhcc---CCEEEEEcCcccccCCCCCC
Q 018013          297 GFDIIYESVGG-----------DM---------------FNLCLKALAV---YGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       297 g~Dvvid~~g~-----------~~---------------~~~~~~~l~~---~G~~v~~G~~~~~~~~~~~~  339 (362)
                      ++|+++++.|.           +.               .+.+++.+.+   .|++|.++......+...+.
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~  156 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFV  156 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCc
Confidence            69999999873           11               1123444432   58999999877655443333

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0029  Score=57.79  Aligned_cols=105  Identities=18%  Similarity=0.197  Sum_probs=66.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CCceeE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.+    +..+.+. ++  |..+ +++.+.+....  .+++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3799999999999999988888999999999987765543    2234332 22  3222 22233332221  246999


Q ss_pred             EEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          301 IYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|+++|..                          ..+..++.+.  ..|+||.+++.....+.
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~  143 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG  143 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC
Confidence            99998831                          1112333343  24799999887765554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.37  E-value=0.0033  Score=56.20  Aligned_cols=78  Identities=26%  Similarity=0.373  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHH----HHHcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQL----LKELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~----l~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+|++|++|..++..+...|++|+++.++..+ .+.    ++..+.. ..+  |..+ +++.+.++...  -.+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999899999777765442 222    2223333 222  3333 22333333221  146


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|.++.++|
T Consensus        84 id~vi~~ag   92 (248)
T PRK05557         84 VDILVNNAG   92 (248)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.36  E-value=0.0041  Score=56.47  Aligned_cols=79  Identities=19%  Similarity=0.282  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHHH-H----cCCc-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLLK-E----LGVD-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l~-~----~g~~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      -++++++|+||++++|.+++..+...|++|+.+.+ ++++.+.+. +    .+.. ..  .|..+ +++.+.+....  -
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999998899999988764 444443321 1    2432 22  23333 23333333321  2


Q ss_pred             CceeEEEECCC
Q 018013          296 KGFDIIYESVG  306 (362)
Q Consensus       296 ~g~Dvvid~~g  306 (362)
                      +.+|++++++|
T Consensus        86 g~id~lv~nAg   96 (260)
T PRK08416         86 DRVDFFISNAI   96 (260)
T ss_pred             CCccEEEECcc
Confidence            46999999985

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0048  Score=55.46  Aligned_cols=78  Identities=22%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCCc-cHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKAE-DIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~~-~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+|++|++|..+++.+...|++|+++.+++++.+.+.    +.+.. +.  .|..+. ++.+.....  ..+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999999999999999988889999999999876654442    22222 22  333332 222222221  11359


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|+++|
T Consensus        85 d~vi~~ag   92 (250)
T PRK07774         85 DYLVNNAA   92 (250)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.36  E-value=0.0025  Score=57.29  Aligned_cols=112  Identities=19%  Similarity=0.223  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc--EE--EeCCC---ccHHHHHHHHC--
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD--RV--INYKA---EDIKTVFKEEF--  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~--~v--~~~~~---~~~~~~~~~~~--  294 (362)
                      .++++++|+|++|++|..+++.+...|++|++++++.++.+.+    ++.+..  .+  .|...   .++.+......  
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999988888899999999987765443    233322  22  23321   22323222221  


Q ss_pred             CCceeEEEECCCh------------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCCCCC
Q 018013          295 PKGFDIIYESVGG------------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       295 ~~g~Dvvid~~g~------------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      .+.+|++|.++|.            +               ..+.+++.+  .+.++|+.++......+...+.
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~  163 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWG  163 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCc
Confidence            1469999998863            1               122333333  2468999999876654433333

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.36  E-value=0.0054  Score=55.85  Aligned_cols=78  Identities=22%  Similarity=0.296  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ++++++|+||  ++|+|.++++.+...|++|+.+.+++...+.++    +.+....  .|..+ +++.+.+....  -++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999996  679999999998899999999876543223332    2343222  23333 23333333321  246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++++|+|
T Consensus        85 iD~lVnnAG   93 (261)
T PRK08690         85 LDGLVHSIG   93 (261)
T ss_pred             CcEEEECCc
Confidence            999999987

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0015  Score=59.26  Aligned_cols=104  Identities=25%  Similarity=0.313  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCCc-cHHHHHHHH--CCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKAE-DIKTVFKEE--FPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~-~~~~~~~~~--~~~g~Dvvid  303 (362)
                      -+|++++|+|++|++|..+++.+...|++|++++++..+.  . .-.+. ...|..+. ++.+.+...  .-+++|++++
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   83 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--L-PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH   83 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--c-CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3578999999999999999999888999999999875532  1 11111 12233332 222222222  1246999999


Q ss_pred             CCChH----------------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          304 SVGGD----------------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       304 ~~g~~----------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      +.|..                            ..+.+++.+++  .|++|.+++......
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  144 (260)
T PRK06523         84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP  144 (260)
T ss_pred             CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence            98720                            11233444433  479999988766544

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.0026  Score=58.33  Aligned_cols=78  Identities=18%  Similarity=0.252  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-------HH----HHHHcCCc-EE--EeCCC-ccHHHHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-------AQ----LLKELGVD-RV--INYKA-EDIKTVFKEE  293 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-------~~----~l~~~g~~-~v--~~~~~-~~~~~~~~~~  293 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++.++       ++    .++..+.. +.  .|..+ +.+.+.+...
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999888899999999986542       11    12233433 22  34333 2233333222


Q ss_pred             C--CCceeEEEECCC
Q 018013          294 F--PKGFDIIYESVG  306 (362)
Q Consensus       294 ~--~~g~Dvvid~~g  306 (362)
                      .  -+++|++|+++|
T Consensus        85 ~~~~g~id~li~~ag   99 (273)
T PRK08278         85 VERFGGIDICVNNAS   99 (273)
T ss_pred             HHHhCCCCEEEECCC
Confidence            1  136999999987

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.0035  Score=56.18  Aligned_cols=75  Identities=17%  Similarity=0.202  Sum_probs=50.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---c-CCc-EEE--eCCC-ccHHHHHHHHCCCceeEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---L-GVD-RVI--NYKA-EDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~-g~~-~v~--~~~~-~~~~~~~~~~~~~g~Dvv  301 (362)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+.+. +   . +.. +++  |..+ .++.+.+... ...+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCEE
Confidence            58999999999999999998889999999999887665432 1   1 111 222  3332 2233333332 2347999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      +.++|
T Consensus        81 v~~ag   85 (243)
T PRK07102         81 LIAVG   85 (243)
T ss_pred             EECCc
Confidence            99876

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.35  E-value=0.00051  Score=63.12  Aligned_cols=98  Identities=18%  Similarity=0.283  Sum_probs=68.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      ++|++||..| +|+ |..+.++++..|.  +|++++.+++..+.+++    .+.+.+ .....++.+.  ....+.+|+|
T Consensus        76 ~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~~~l--~~~~~~fD~V  150 (272)
T PRK11873         76 KPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGEIEAL--PVADNSVDVI  150 (272)
T ss_pred             CCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcchhhC--CCCCCceeEE
Confidence            8999999998 555 8888888887775  79999999998888865    344322 1111222111  0123579999


Q ss_pred             EECCC-------hHHHHHHHHHhccCCEEEEEcCcc
Q 018013          302 YESVG-------GDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       302 id~~g-------~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +.+..       ...++.+.+.|++||+|+..+...
T Consensus       151 i~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~  186 (272)
T PRK11873        151 ISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVL  186 (272)
T ss_pred             EEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence            86532       257899999999999999977654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.34  E-value=0.0032  Score=58.86  Aligned_cols=79  Identities=25%  Similarity=0.301  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHHH----HHHcCCcEEE---eCCC-ccHHHHHHHHC-CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQL----LKELGVDRVI---NYKA-EDIKTVFKEEF-PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~~----l~~~g~~~v~---~~~~-~~~~~~~~~~~-~~g  297 (362)
                      -.+++++|+|+++++|...++.+...|++|++.+++. ++.+.    ++..|....+   |..+ +.+.+.+.... -++
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            3578999999999999999988888999999987642 23322    2334443222   2222 22222222211 246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|+++|
T Consensus        90 iD~li~nAG   98 (306)
T PRK07792         90 LDIVVNNAG   98 (306)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.33  E-value=0.0031  Score=57.22  Aligned_cols=113  Identities=15%  Similarity=0.095  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCC-----------HhHH----HHHHHcCCcE-EE--eCCC-ccHH
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGG-----------EHKA----QLLKELGVDR-VI--NYKA-EDIK  287 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~-----------~~~~----~~l~~~g~~~-v~--~~~~-~~~~  287 (362)
                      .|++++|+|++  +++|..++..+...|++|++++++           .++.    +.+++.|... ++  |..+ +++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            57899999987  499999999999999999987532           1111    2233445432 22  3333 3333


Q ss_pred             HHHHHHC--CCceeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCCC
Q 018013          288 TVFKEEF--PKGFDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       288 ~~~~~~~--~~g~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~  337 (362)
                      +.+....  -+.+|++|++.|..                          ..+..++.++  .+|+||.+++.....+...
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  164 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVG  164 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCC
Confidence            3333321  13589999998720                          1123345554  3689999999887655444


Q ss_pred             CCCC
Q 018013          338 WQPS  341 (362)
Q Consensus       338 ~~~~  341 (362)
                      +..+
T Consensus       165 ~~~Y  168 (256)
T PRK12859        165 ELAY  168 (256)
T ss_pred             chHH
Confidence            4433

>PRK07023 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.0036  Score=56.15  Aligned_cols=109  Identities=15%  Similarity=0.192  Sum_probs=67.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcE---EEeCCC-ccHHHHHHH----HC--CCceeE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDR---VINYKA-EDIKTVFKE----EF--PKGFDI  300 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~---v~~~~~-~~~~~~~~~----~~--~~g~Dv  300 (362)
                      .+++|+|++|++|..+++.+...|++|++++++.++. .....+...   ..|..+ +++.+.+..    ..  ...+|+
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL   80 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence            3799999999999999998888899999998875542 223334321   233333 223332222    11  246899


Q ss_pred             EEECCChH---------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCCCC
Q 018013          301 IYESVGGD---------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       301 vid~~g~~---------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~~  340 (362)
                      +++|.|..                           ..+.+.+.+.  ..|+||.+++...+.+...+..
T Consensus        81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  149 (243)
T PRK07023         81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSV  149 (243)
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchH
Confidence            99987621                           1223444443  3589999999877665544443

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.31  E-value=0.0019  Score=58.84  Aligned_cols=109  Identities=21%  Similarity=0.308  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh----HHHHHHHcCCc--EEEeCCC-ccHH---HHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH----KAQLLKELGVD--RVINYKA-EDIK---TVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~----~~~~l~~~g~~--~v~~~~~-~~~~---~~~~~~~~~g  297 (362)
                      -.|+.|||+||++|+|.+.++-...+|++++.++.+.+    ..+.+++.|-.  .+.|-.+ +++.   +.+++..| .
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G-~  114 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG-D  114 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC-C
Confidence            57999999999999999888777778999888887644    33444555522  2333332 3443   33343333 6


Q ss_pred             eeEEEECCCh-----------HHHHH---------------HHHH-h-ccCCEEEEEcCcccccCCCC
Q 018013          298 FDIIYESVGG-----------DMFNL---------------CLKA-L-AVYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~~~~---------------~~~~-l-~~~G~~v~~G~~~~~~~~~~  337 (362)
                      +|+++|++|-           +.++.               .+.. + .+.|.+|.+.+..+.-+...
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g  182 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG  182 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc
Confidence            9999999982           12222               2222 2 36799999999888766543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.30  E-value=0.005  Score=55.77  Aligned_cols=79  Identities=27%  Similarity=0.330  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.++++||+|++|++|..+++.+...|++|++++++.++.+.+.    ..+.. +.  .|..+ +.+.+.+....  -++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999998889999999999887765553    22322 22  23333 22333222221  146


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|.++|
T Consensus        90 id~vi~~ag   98 (259)
T PRK08213         90 VDILVNNAG   98 (259)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0035  Score=58.51  Aligned_cols=104  Identities=19%  Similarity=0.271  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc-----CCc-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL-----GVD-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~-----g~~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      ..+++++|+||+|++|..+++.+...|++|++++++.++.+.+. ++     +.. .+  .|..+ +++.+.+.+..  -
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            46799999999999999999888888999999999877654431 11     222 22  23333 22333333321  2


Q ss_pred             CceeEEEECCCh---------H---------------HHHHHHHHhcc--CCEEEEEcCccc
Q 018013          296 KGFDIIYESVGG---------D---------------MFNLCLKALAV--YGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~---------~---------------~~~~~~~~l~~--~G~~v~~G~~~~  331 (362)
                      +++|++|+++|.         +               ....+++.++.  +|+||.+++...
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~  155 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGH  155 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHH
Confidence            469999999872         0               12345555543  579999987653

>PRK08226 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0038  Score=56.68  Aligned_cols=78  Identities=18%  Similarity=0.253  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH---HcCCc-EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK---ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~---~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++++|+|++|++|..+++.+...|++|+++.++++..+.++   ..+.. ..  .|..+ +++.+.+....  -+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999998889999999998865433333   22332 12  23333 22333332221  24689


Q ss_pred             EEEECCC
Q 018013          300 IIYESVG  306 (362)
Q Consensus       300 vvid~~g  306 (362)
                      ++|++.|
T Consensus        85 ~vi~~ag   91 (263)
T PRK08226         85 ILVNNAG   91 (263)
T ss_pred             EEEECCC
Confidence            9999988

>PRK07775 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.005  Score=56.45  Aligned_cols=109  Identities=17%  Similarity=0.210  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-EE--eCCC-ccHHHHHHHH--CCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-VI--NYKA-EDIKTVFKEE--FPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v~--~~~~-~~~~~~~~~~--~~~g  297 (362)
                      .+.++++|+||+|++|..+++.+...|++|++++++.++.+.+.    ..+... ++  |..+ +++.+.+...  .-++
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            34579999999999999999988889999999998776554332    234332 22  3333 2233333322  1246


Q ss_pred             eeEEEECCChH-----------H---------------HHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGGD-----------M---------------FNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++|+++|..           .               .+.+++.+  +..|+||.+++...+.+..
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~  154 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP  154 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence            89999998731           1               11122222  2357899999877665543

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0054  Score=55.07  Aligned_cols=77  Identities=22%  Similarity=0.317  Sum_probs=52.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----c--CCc-EE--EeCCCc-cHHHHHHHHC--CCc
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----L--GVD-RV--INYKAE-DIKTVFKEEF--PKG  297 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~--g~~-~v--~~~~~~-~~~~~~~~~~--~~g  297 (362)
                      +++++|+|++|++|..+++.+...|++|+++++++++.+.+.+    .  +.. ++  .|..+. ++.+.+....  -++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999888888889999999998877655532    1  222 22  243332 2333333221  246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|++.|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=97.28  E-value=0.0029  Score=56.73  Aligned_cols=78  Identities=22%  Similarity=0.252  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+||+|++|..++..+...|++|++++++.++...+    +..+.. .++  |..+ +++.+.+....  -+.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            467999999999999999998888899999999986654433    333332 222  3332 22333332221  1368


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|++.|
T Consensus        85 d~vi~~ag   92 (251)
T PRK12826         85 DILVANAG   92 (251)
T ss_pred             CEEEECCC
Confidence            99999986

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.28  E-value=0.0036  Score=55.97  Aligned_cols=105  Identities=28%  Similarity=0.344  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHHC--CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      ++++||+|++|++|..++..+...|++|+++ .++.++.+.+.    ..+.. .++  |..+ +.+.+.+....  -+++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999998888889999998 88776654442    22222 222  3322 22222222221  1369


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      |++|.+.|..                          .++.+++.+.+  .|+||.++......+
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~  148 (247)
T PRK05565         85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG  148 (247)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC
Confidence            9999988731                          13334444433  478999988765444

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0018  Score=57.35  Aligned_cols=77  Identities=21%  Similarity=0.230  Sum_probs=56.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHCCCceeEEEECCCh
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.++..+.. ...|..+ +.+.+.+....+.++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            5799999999999999988888899999999998887777666553 2234433 233333333444579999998763

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.27  E-value=0.0038  Score=56.49  Aligned_cols=103  Identities=19%  Similarity=0.129  Sum_probs=66.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc--CCcEE-EeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL--GVDRV-INYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~--g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      ..+++|+|+||+|.+|..+++.+...|++|+++.++.++.......  ++..+ .|..+. ...... ..+.++|+||.+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~-~~~~~~d~vi~~   92 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG-SDKLVE-AIGDDSDAVICA   92 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC-HHHHHH-HhhcCCCEEEEC
Confidence            4468999999999999999988888899999999887765443221  23222 344331 122222 222469999998


Q ss_pred             CChH--------------HHHHHHHHhcc--CCEEEEEcCcccc
Q 018013          305 VGGD--------------MFNLCLKALAV--YGRLIVIGMISQY  332 (362)
Q Consensus       305 ~g~~--------------~~~~~~~~l~~--~G~~v~~G~~~~~  332 (362)
                      .|..              .....++.+..  .++||.++..+.+
T Consensus        93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~  136 (251)
T PLN00141         93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVN  136 (251)
T ss_pred             CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccccc
Confidence            7631              12344554443  3699999887644

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0025  Score=56.28  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEE--eCCCc-cHHHHHHHHCCCceeEEEECC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVI--NYKAE-DIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~--~~~~~-~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .++++|+||+|++|..++..+... ++|++++++.++.+.+.+ ...-+++  |..+. ++.+.+.. . .++|.+|.+.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi~~a   79 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQ-L-GRLDVLVHNA   79 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHh-c-CCCCEEEECC
Confidence            368999999999999988877666 999999998877665543 2111223  32221 22222221 1 2699999998


Q ss_pred             ChH-----------H---------------HHHHHHHhc-cCCEEEEEcCcccccCC
Q 018013          306 GGD-----------M---------------FNLCLKALA-VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       306 g~~-----------~---------------~~~~~~~l~-~~G~~v~~G~~~~~~~~  335 (362)
                      |..           .               .+.+++.++ ..++++.++........
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~  136 (227)
T PRK08219         80 GVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRAN  136 (227)
T ss_pred             CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcC
Confidence            731           0               223333333 36899999877665443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.26  E-value=0.0036  Score=56.95  Aligned_cols=75  Identities=20%  Similarity=0.198  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHC--CCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      .+++++|+|++|++|.++++.+...|++|+.++++.++.+.   ..+. ...|..+ +++.+.+....  -+.+|+++++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   84 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN   84 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            47899999999999999999999999999999887654321   1111 1234333 23333333221  1468999999


Q ss_pred             CC
Q 018013          305 VG  306 (362)
Q Consensus       305 ~g  306 (362)
                      .|
T Consensus        85 Ag   86 (266)
T PRK06171         85 AG   86 (266)
T ss_pred             Cc
Confidence            87

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0032  Score=54.70  Aligned_cols=91  Identities=18%  Similarity=0.236  Sum_probs=60.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-cHHHHHHHHCCCceeEEEECCCh---
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGG---  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~---  307 (362)
                      +++|+|+++++|..++..+... ++|++++++..          ....|..+. ++.+.+.. . +++|+++++.|.   
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~-~-~~id~lv~~ag~~~~   68 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPASIRALFEK-V-GKVDAVVSAAGKVHF   68 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHHHHHHHHh-c-CCCCEEEECCCCCCC
Confidence            6899999999999988777666 99999988643          122344442 23333332 2 368999999872   


Q ss_pred             --------H---------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          308 --------D---------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       308 --------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                              +               ..+.+++.+.++|+|+.++......+.
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~  119 (199)
T PRK07578         69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI  119 (199)
T ss_pred             CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC
Confidence                    0               122344556678999999887765443

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.23  E-value=0.0041  Score=54.27  Aligned_cols=100  Identities=21%  Similarity=0.376  Sum_probs=68.0

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHH----HcCC-cEEEeCCCccHHHHHHHHC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLK----ELGV-DRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~----~~g~-~~v~~~~~~~~~~~~~~~~  294 (362)
                      +.+....++++|+-.| +|. |..++.+++..+  .+|++++.+++..+.++    .+|. +.+.... .+..+.+.. .
T Consensus        33 l~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~~~~l~~-~  108 (198)
T PRK00377         33 LSKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEAPEILFT-I  108 (198)
T ss_pred             HHHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-echhhhHhh-c
Confidence            3445558999999999 455 888888888764  58999999988877664    3563 3221111 122222222 2


Q ss_pred             CCceeEEEECCC----hHHHHHHHHHhccCCEEEE
Q 018013          295 PKGFDIIYESVG----GDMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       295 ~~g~Dvvid~~g----~~~~~~~~~~l~~~G~~v~  325 (362)
                      ...+|.||.+.+    ...++.+.+.|+++|+++.
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            346999998655    2578888999999999985

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=97.23  E-value=0.0024  Score=66.31  Aligned_cols=78  Identities=23%  Similarity=0.352  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H----cCCc--EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E----LGVD--RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~----~g~~--~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .++++||+|++|++|.++++.+...|++|++++++.++.+.+. +    .+..  ..  .|..+ +++.+.+.+..  -+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999988889999999999877665543 2    2321  11  23333 22333333221  24


Q ss_pred             ceeEEEECCC
Q 018013          297 GFDIIYESVG  306 (362)
Q Consensus       297 g~Dvvid~~g  306 (362)
                      ++|++|+++|
T Consensus       493 ~iDilV~nAG  502 (676)
T TIGR02632       493 GVDIVVNNAG  502 (676)
T ss_pred             CCcEEEECCC
Confidence            6999999988

>PRK05599 hypothetical protein; Provisional

Probab=97.22  E-value=0.0062  Score=54.90  Aligned_cols=109  Identities=13%  Similarity=0.165  Sum_probs=67.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc--EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD--RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~--~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++|+||++|+|.++++.+. .|++|+++.+++++.+.+.    +.|.+  +.  .|..+ +++.+.+....  -+++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            368999999999999887766 4999999999888776552    33432  22  23333 22333333221  24699


Q ss_pred             EEEECCCh----H-----------HH-----------HHHHHHhc-c--CCEEEEEcCcccccCCCCCCC
Q 018013          300 IIYESVGG----D-----------MF-----------NLCLKALA-V--YGRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       300 vvid~~g~----~-----------~~-----------~~~~~~l~-~--~G~~v~~G~~~~~~~~~~~~~  340 (362)
                      +++++.|.    .           .+           ...++.|. .  +|+||.+++..+..+...+..
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~  149 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYV  149 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcc
Confidence            99999873    0           00           12223443 2  589999998877655433333

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=97.21  E-value=0.0045  Score=55.35  Aligned_cols=109  Identities=26%  Similarity=0.312  Sum_probs=66.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHH-HHHHcC---Cc-EEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQ-LLKELG---VD-RVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~-~l~~~g---~~-~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      ++++|+|++|++|..+++.+...|++|+.++++.. ..+ ....+.   .. .++  |..+ +.+.+.+....  -+.+|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999988888999999988743 121 222222   11 222  3333 22333333221  24599


Q ss_pred             EEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCCC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~~  339 (362)
                      +++++.|..                          ..+.+++.++  ..|+||.++......+...+.
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~  150 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQT  150 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCCh
Confidence            999998721                          1122344553  468999999877665543333

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=97.19  E-value=0.004  Score=55.55  Aligned_cols=105  Identities=28%  Similarity=0.433  Sum_probs=64.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH-HH---cCCc-EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL-KE---LGVD-RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l-~~---~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      +++||+|++|++|..+++.+...|++|+++.+ +.++.+.. .+   .+.. .+  .|..+ ..+.+.+....  .+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            57899999999999999999999999999887 44443332 22   2222 12  23333 22333332221  24689


Q ss_pred             EEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      +||++.|..                          ..+..+..++.  .|+|+.++......+.
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~  144 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ  144 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC
Confidence            999998721                          11223444433  4799999887654443

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0025  Score=57.60  Aligned_cols=73  Identities=15%  Similarity=0.292  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHHHHHHcCCcEE--EeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQLLKELGVDRV--INYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~~l~~~g~~~v--~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++. ++.+.... +....  .|..+  ..+. .... +++|++++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~~~~-~~~~-~~iDilVnnA   87 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGK--EESL-DKQL-ASLDVLILNH   87 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCC--HHHH-HHhc-CCCCEEEECC
Confidence            468999999999999999999999999999998875 22222111 11222  23332  2222 2222 3599999998


Q ss_pred             C
Q 018013          306 G  306 (362)
Q Consensus       306 g  306 (362)
                      |
T Consensus        88 G   88 (245)
T PRK12367         88 G   88 (245)
T ss_pred             c
Confidence            7

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=97.16  E-value=0.018  Score=52.99  Aligned_cols=118  Identities=20%  Similarity=0.213  Sum_probs=82.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-c--CC--cEEEeCCC-ccHH---HHHHHH-CCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-L--GV--DRVINYKA-EDIK---TVFKEE-FPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~--g~--~~v~~~~~-~~~~---~~~~~~-~~~g  297 (362)
                      -+++.|+|+|..+|.|..++.-+-..|.+|++.+-+++..+.++. .  +-  ...+|..+ +++.   +.+++. ..+|
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            677889999999999999999999999999999988887777753 2  11  12345444 3343   333333 3467


Q ss_pred             eeEEEECCCh-------H--------------------HHHHHHHHhc-cCCEEEEEcCcccccCCCCCCCCChhh
Q 018013          298 FDIIYESVGG-------D--------------------MFNLCLKALA-VYGRLIVIGMISQYQGEHGWQPSNYPG  345 (362)
Q Consensus       298 ~Dvvid~~g~-------~--------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~~~~~~~~~~  345 (362)
                      .=.++||+|-       +                    ..+..+.+++ ..||+|.+++..+....+...++...+
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK  182 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSK  182 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhH
Confidence            8889999981       1                    2224445554 469999999999988765555554443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=97.16  E-value=0.012  Score=53.00  Aligned_cols=77  Identities=29%  Similarity=0.334  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EE--EeCCC-ccHHHHHHHH--CCCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RV--INYKA-EDIKTVFKEE--FPKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~D  299 (362)
                      ++++||+|++|++|..++..+...|++|++++++.++.+.+.+    .+.. ..  .|..+ +++.+.+...  .-+++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999998888899999999998876655532    2322 12  23333 2233332222  124589


Q ss_pred             EEEECCC
Q 018013          300 IIYESVG  306 (362)
Q Consensus       300 vvid~~g  306 (362)
                      ++|.+.+
T Consensus        81 ~vi~~a~   87 (255)
T TIGR01963        81 ILVNNAG   87 (255)
T ss_pred             EEEECCC
Confidence            9999876

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.15  E-value=0.01  Score=54.44  Aligned_cols=109  Identities=23%  Similarity=0.280  Sum_probs=73.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE-E--EeCCCc---cH---HHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR-V--INYKAE---DI---KTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~-v--~~~~~~---~~---~~~~~~~~--~  295 (362)
                      ++-..|+|+|++.|+|++.+.-++..|++|.++.++.+|+..++ .++... +  +.+.+.   ++   ...++++.  .
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE  110 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence            56689999999999999999999999999999999999988885 344321 1  122222   22   22233221  2


Q ss_pred             CceeEEEECCChH--------------------------HHHHHHHHhcc---CCEEEEEcCcccccCCC
Q 018013          296 KGFDIIYESVGGD--------------------------MFNLCLKALAV---YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       296 ~g~Dvvid~~g~~--------------------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~  336 (362)
                      ..+|.+|+|+|..                          ...+.++.++.   -|+|+.+++....-+..
T Consensus       111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~  180 (331)
T KOG1210|consen  111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY  180 (331)
T ss_pred             CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc
Confidence            4589999999842                          11234444443   35999999876644443

>TIGR02415 23BDH acetoin reductases

Probab=97.14  E-value=0.0084  Score=53.98  Aligned_cols=76  Identities=21%  Similarity=0.273  Sum_probs=51.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      ++++|+|++|++|..+++.+...|++|+.+.+++++.+.+    +..+.. ..  .|..+ +++.+.+....  .+.+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999989999999999887655433    233432 22  23333 22333332221  236899


Q ss_pred             EEECCC
Q 018013          301 IYESVG  306 (362)
Q Consensus       301 vid~~g  306 (362)
                      +|++.|
T Consensus        81 vi~~ag   86 (254)
T TIGR02415        81 MVNNAG   86 (254)
T ss_pred             EEECCC
Confidence            999987

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.13  E-value=0.0026  Score=58.96  Aligned_cols=96  Identities=17%  Similarity=0.216  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      +++++||-.| +|. |..++.+++ .|+ +|++++.++...+.+++    .+.. .+.... .+.    ......++|+|
T Consensus       158 ~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~~----~~~~~~~fDlV  229 (288)
T TIGR00406       158 LKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IYL----EQPIEGKADVI  229 (288)
T ss_pred             CCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-ccc----ccccCCCceEE
Confidence            5789999998 444 777766665 465 89999999887777654    2322 111111 111    11123579999


Q ss_pred             EECCCh----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          302 YESVGG----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       302 id~~g~----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +.+...    ..+..+.+.|+++|.++..|....
T Consensus       230 van~~~~~l~~ll~~~~~~LkpgG~li~sgi~~~  263 (288)
T TIGR00406       230 VANILAEVIKELYPQFSRLVKPGGWLILSGILET  263 (288)
T ss_pred             EEecCHHHHHHHHHHHHHHcCCCcEEEEEeCcHh
Confidence            987653    456778899999999999887543

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0044  Score=64.19  Aligned_cols=107  Identities=19%  Similarity=0.225  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+||+|++|..++..+...|++|+++++++++.+.+.    ..+.. .+  .|..+ +++.+.+...  .-+++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            3689999999999999999888888999999999888765543    22332 22  23333 2233333322  12359


Q ss_pred             eEEEECCChH-------------HH---------------HHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGGD-------------MF---------------NLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~~-------------~~---------------~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      |++++|+|..             .+               +.++..++  ..|+||.+++...+...
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  516 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA  516 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC
Confidence            9999998820             01               12233333  35899999988776553

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.10  E-value=0.0054  Score=55.70  Aligned_cols=101  Identities=19%  Similarity=0.232  Sum_probs=65.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCCH--hHHHHHH-HcCCc---EEEeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGGE--HKAQLLK-ELGVD---RVINYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l~-~~g~~---~v~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+|+  ++|+|.++++.+...|++|++++++.  +..+.+. +++..   ...|..+ +++.+.+....  -++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998  79999999998888999999998653  3334443 34322   2233333 23333333321  246


Q ss_pred             eeEEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCc
Q 018013          298 FDIIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       298 ~Dvvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +|++++++|..                              ..+.+++.++++|++|.++..
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~  147 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD  147 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec
Confidence            99999998721                              112355667778999988643

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.10  E-value=0.0031  Score=56.68  Aligned_cols=78  Identities=18%  Similarity=0.244  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc---EEEeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD---RVINYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~---~v~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      ++++++|+|++|++|..+++.+...|++|+++++++++.+.+.    ..+..   ...|..+ +++.+.+....  .+++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999989999999999877655442    23443   1233333 23333333321  1468


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|+++|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999987

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.09  E-value=0.0036  Score=54.51  Aligned_cols=100  Identities=26%  Similarity=0.269  Sum_probs=69.6

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEE-EeCCCccHHHHHHHHCCC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRV-INYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v-~~~~~~~~~~~~~~~~~~  296 (362)
                      +..+..++|++||=+|  +|.|..++-+|+..| +|+.+.+.++-.+.+    +.+|...| +...|.. .-.   ....
T Consensus        65 ~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~-~G~---~~~a  137 (209)
T COG2518          65 LQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS-KGW---PEEA  137 (209)
T ss_pred             HHHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc-cCC---CCCC
Confidence            4445559999999999  567999999999988 999999987744444    56887533 2222211 000   0124


Q ss_pred             ceeEEEECCCh-HHHHHHHHHhccCCEEEEEcC
Q 018013          297 GFDIIYESVGG-DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       297 g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      .+|.|+-+.+. +.-+..++.|++||++|..-.
T Consensus       138 PyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         138 PYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             CcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            68999887775 444677899999999887544

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0094  Score=54.73  Aligned_cols=100  Identities=23%  Similarity=0.235  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC-CCceeE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF-PKGFDI  300 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~-~~g~Dv  300 (362)
                      +++++|+|+ |++|.+++..+. .|++|+++++++++.+.+.    ..|.. ++  .|..+ +++.+.+.... -+++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            467899996 799999988875 7999999999877655442    23432 22  34433 23333333321 246999


Q ss_pred             EEECCCh----H---------------HHHHHHHHhccCCEEEEEcCccc
Q 018013          301 IYESVGG----D---------------MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       301 vid~~g~----~---------------~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +++|+|.    +               .++.+++.+.++|+++.+++...
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~  129 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSG  129 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEeccc
Confidence            9999983    1               13345556677788888877654

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.08  E-value=0.0033  Score=58.98  Aligned_cols=110  Identities=22%  Similarity=0.311  Sum_probs=70.8

Q ss_pred             hhHHHHHHHHHHhCC----CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHH-HHHHHcCCcEEEeCCCccH
Q 018013          213 TSGLTASIALEQAGP----ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKA-QLLKELGVDRVINYKAEDI  286 (362)
Q Consensus       213 ~~~~tA~~al~~~~~----~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~-~~l~~~g~~~v~~~~~~~~  286 (362)
                      .+...++.++.....    -++++|+|.| +|.+|..+++.++..|+ +|+++.++.++. ++++++|.. +++.  +++
T Consensus       157 ~~~sv~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~  232 (311)
T cd05213         157 GAVSISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-AVPL--DEL  232 (311)
T ss_pred             CCcCHHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-EEeH--HHH
Confidence            345566666554433    4799999999 69999999999998775 899999998876 455678873 3322  122


Q ss_pred             HHHHHHHCCCceeEEEECCChHHH----HHHHHHhccCC-EEEEEcCccc
Q 018013          287 KTVFKEEFPKGFDIIYESVGGDMF----NLCLKALAVYG-RLIVIGMISQ  331 (362)
Q Consensus       287 ~~~~~~~~~~g~Dvvid~~g~~~~----~~~~~~l~~~G-~~v~~G~~~~  331 (362)
                      .+.+     ..+|+||.|++....    ...+......+ .++.++.+..
T Consensus       233 ~~~l-----~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrd  277 (311)
T cd05213         233 LELL-----NEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRD  277 (311)
T ss_pred             HHHH-----hcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCC
Confidence            2222     347999999996433    22222222123 5667776544

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.08  E-value=0.0045  Score=58.15  Aligned_cols=94  Identities=23%  Similarity=0.254  Sum_probs=64.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE-eCCCc-cHHHHHHHHCCCceeEEEECCChH-
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI-NYKAE-DIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      +|+|+||+|-+|..+++.+...|.+|.+++++.++...+...+++.+. |..+. ++.+.   .  .++|+||++++.. 
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a---l--~g~d~Vi~~~~~~~   76 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPS---F--KGVTAIIDASTSRP   76 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHH---H--CCCCEEEECCCCCC
Confidence            699999999999999999988999999999987766666556665332 33332 22222   2  3689999987621 


Q ss_pred             ------------HHHHHHHHhccCC--EEEEEcCcc
Q 018013          309 ------------MFNLCLKALAVYG--RLIVIGMIS  330 (362)
Q Consensus       309 ------------~~~~~~~~l~~~G--~~v~~G~~~  330 (362)
                                  .....++.++..|  +||.++..+
T Consensus        77 ~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~  112 (317)
T CHL00194         77 SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILN  112 (317)
T ss_pred             CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccc
Confidence                        1134455555554  899988754

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.07  E-value=0.021  Score=49.62  Aligned_cols=83  Identities=27%  Similarity=0.323  Sum_probs=55.8

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-c----CCcEE-EeCCC-ccHHHHHHH
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-L----GVDRV-INYKA-EDIKTVFKE  292 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~----g~~~v-~~~~~-~~~~~~~~~  292 (362)
                      .+.+... -++++++|.|++|++|..++..+...|++|+++.++.++.+.+.+ +    +.... .+..+ +++.+.+  
T Consensus        18 ~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~--   95 (194)
T cd01078          18 ALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI--   95 (194)
T ss_pred             HHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH--
Confidence            3444443 567899999999999999888888889999999999887766542 2    33211 22222 2222222  


Q ss_pred             HCCCceeEEEECCChH
Q 018013          293 EFPKGFDIIYESVGGD  308 (362)
Q Consensus       293 ~~~~g~Dvvid~~g~~  308 (362)
                         .++|+||+++...
T Consensus        96 ---~~~diVi~at~~g  108 (194)
T cd01078          96 ---KGADVVFAAGAAG  108 (194)
T ss_pred             ---hcCCEEEECCCCC
Confidence               3589999988753

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.07  E-value=0.0038  Score=53.59  Aligned_cols=92  Identities=16%  Similarity=0.125  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|+| .|.+|+.+++.++.+|++|++.+++..........+...      .++.+.+.     ..|+|+.+...
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~-----~aDiv~~~~pl  101 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY------VSLDELLA-----QADIVSLHLPL  101 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHH-----H-SEEEE-SSS
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccccccee------eehhhhcc-----hhhhhhhhhcc
Confidence            4689999999 899999999999999999999999877655344444311      24444443     26888887762


Q ss_pred             -H-----HHHHHHHHhccCCEEEEEcCccc
Q 018013          308 -D-----MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       308 -~-----~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       +     .-...+..|+++..||.++.-+-
T Consensus       102 t~~T~~li~~~~l~~mk~ga~lvN~aRG~~  131 (178)
T PF02826_consen  102 TPETRGLINAEFLAKMKPGAVLVNVARGEL  131 (178)
T ss_dssp             STTTTTSBSHHHHHTSTTTEEEEESSSGGG
T ss_pred             ccccceeeeeeeeeccccceEEEeccchhh
Confidence             1     23466788888888888776443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK12744 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.013  Score=53.11  Aligned_cols=79  Identities=22%  Similarity=0.271  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC----HhHHHH----HHHcCCc-EE--EeCCC-ccHHHHHHHHC--
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG----EHKAQL----LKELGVD-RV--INYKA-EDIKTVFKEEF--  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~----~~~~~~----l~~~g~~-~v--~~~~~-~~~~~~~~~~~--  294 (362)
                      .+++++|+|++|++|..+++.+...|++|++++++    .++.+.    ++..+.. ..  .|..+ +++.+.+....  
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            46899999999999999999998899997766532    222222    2223433 22  23333 22333333221  


Q ss_pred             CCceeEEEECCCh
Q 018013          295 PKGFDIIYESVGG  307 (362)
Q Consensus       295 ~~g~Dvvid~~g~  307 (362)
                      .+++|++|++.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            2469999999873

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.05  E-value=0.0019  Score=50.46  Aligned_cols=90  Identities=27%  Similarity=0.416  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEecCCHhHHHHHHH-c---CC-c--EEEeCCCccHHHHHHHHCCCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCGGEHKAQLLKE-L---GV-D--RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~-~~G~~Vi~~~~~~~~~~~l~~-~---g~-~--~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      |+.+||-.|  .|.|..++.+++ ..+++|++++.+++-.+.+++ .   +. +  .++..   ++  .........+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~---d~--~~~~~~~~~~D~   73 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG---DA--EFDPDFLEPFDL   73 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES---CC--HGGTTTSSCEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC---cc--ccCcccCCCCCE
Confidence            688999998  355888888888 578899999999998888864 2   22 2  22222   22  111123456999


Q ss_pred             EEECC-Ch----H------HHHHHHHHhccCCEEEE
Q 018013          301 IYESV-GG----D------MFNLCLKALAVYGRLIV  325 (362)
Q Consensus       301 vid~~-g~----~------~~~~~~~~l~~~G~~v~  325 (362)
                      |+... ..    .      .++.+.+.|+++|+++.
T Consensus        74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   74 VICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             EEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             EEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            99987 31    2      37888999999999986

...

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=97.05  E-value=0.011  Score=55.48  Aligned_cols=77  Identities=18%  Similarity=0.330  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHH-HcC---Cc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLK-ELG---VD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~-~~g---~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +++++|+|+++|+|.++++.+...| ++|++++++.++.+.+. ++.   .. ++  .|..+ +++.+.+....  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            6799999999999999998888889 89999999887765553 332   11 22  34433 23333333321  2469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|+++|
T Consensus        83 D~lI~nAG   90 (314)
T TIGR01289        83 DALVCNAA   90 (314)
T ss_pred             CEEEECCC
Confidence            99999987

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.05  E-value=0.0041  Score=58.48  Aligned_cols=78  Identities=22%  Similarity=0.380  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcC---Cc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELG---VD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g---~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+. ++.   .. .+  .|..+ +++.+.+...  ..+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            5789999999999999999988889999999999888765543 332   11 12  23333 2233333322  23469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|+++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=97.04  E-value=0.012  Score=52.36  Aligned_cols=75  Identities=27%  Similarity=0.291  Sum_probs=47.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHH----HHHHcCCc-EE--EeCCCcc-HHHHHHHH--CCCceeEE
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQ----LLKELGVD-RV--INYKAED-IKTVFKEE--FPKGFDII  301 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~----~l~~~g~~-~v--~~~~~~~-~~~~~~~~--~~~g~Dvv  301 (362)
                      ++|+|++|++|..+++.+...|++|++++++. ++.+    .+++.|.. +.  .|..+.+ +.+.+...  .-.++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999888899999998764 2222    22334532 22  3333322 22222221  11468999


Q ss_pred             EECCCh
Q 018013          302 YESVGG  307 (362)
Q Consensus       302 id~~g~  307 (362)
                      +++.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            999883

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0065  Score=54.00  Aligned_cols=99  Identities=19%  Similarity=0.211  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHC-CCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEF-PKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~-~~g~Dvvid~~  305 (362)
                      .+++++|+|++|++|..+++.+...|++|+++.++.++     ..... ...|..+ +++.+.+.... ..++|++|++.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            46789999999999999999999999999999987654     11111 2234443 22333333321 23689999998


Q ss_pred             ChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccc
Q 018013          306 GGD--------------------------MFNLCLKALA--VYGRLIVIGMISQY  332 (362)
Q Consensus       306 g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~  332 (362)
                      |..                          ..+.+++.++  ..|+||.++....+
T Consensus        77 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  131 (234)
T PRK07577         77 GIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF  131 (234)
T ss_pred             CCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc
Confidence            731                          1223344443  34799999887543

>PRK06720 hypothetical protein; Provisional

Probab=97.01  E-value=0.0094  Score=50.69  Aligned_cols=78  Identities=22%  Similarity=0.319  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+||++++|..++..+...|++|++++++.+..+.+    .+.+.. ..+  |..+ +++.+.+...  .-+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999988888999999999887655433    223433 222  2222 2223322221  12469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++++++|
T Consensus        95 DilVnnAG  102 (169)
T PRK06720         95 DMLFQNAG  102 (169)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0084  Score=53.16  Aligned_cols=100  Identities=16%  Similarity=0.215  Sum_probs=64.5

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc--CCc-EEE--eCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL--GVD-RVI--NYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~--g~~-~v~--~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|+||+|++|..+++.+...|++|++++++.++.+.+. ++  +.. +++  |..+ +.+.+.+...  +.+|++|++.|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999988889999999999877665543 22  222 222  3333 2233333322  45899999987


Q ss_pred             h-----------HHHHH-----------H--HHHhccCCEEEEEcCcccccCC
Q 018013          307 G-----------DMFNL-----------C--LKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       307 ~-----------~~~~~-----------~--~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      .           +.++.           .  ...++..|+||.++....+...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~  131 (230)
T PRK07041         79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS  131 (230)
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC
Confidence            3           11111           1  1234467999999988776553

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.013  Score=52.50  Aligned_cols=78  Identities=18%  Similarity=0.287  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC----CHhHHHHH----HHcCCc-EEE--eCCCc-cHHHHHHHHC--
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG----GEHKAQLL----KELGVD-RVI--NYKAE-DIKTVFKEEF--  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~----~~~~~~~l----~~~g~~-~v~--~~~~~-~~~~~~~~~~--  294 (362)
                      .+.+++|+||+|++|..++..+...|++|+++++    +.++.+.+    ...+.. +++  |..+. .+.+.+....  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999888889999988654    33333332    223333 222  33332 2333332221  


Q ss_pred             CCceeEEEECCC
Q 018013          295 PKGFDIIYESVG  306 (362)
Q Consensus       295 ~~g~Dvvid~~g  306 (362)
                      ..++|.+|.++|
T Consensus        85 ~~~~d~vi~~ag   96 (249)
T PRK12827         85 FGRLDILVNNAG   96 (249)
T ss_pred             hCCCCEEEECCC
Confidence            246999999987

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.98  E-value=0.0088  Score=57.98  Aligned_cols=104  Identities=22%  Similarity=0.262  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHH-------HHHHc-CCcEE-EeCCCc-cHHHHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ-------LLKEL-GVDRV-INYKAE-DIKTVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~-------~l~~~-g~~~v-~~~~~~-~~~~~~~~~~~~g  297 (362)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+       ..... ++..+ .|..+. .+.+.++.. +.+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~~  136 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GDP  136 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CCC
Confidence            66789999999999999999998889999999998765421       11111 33322 344443 233333321 226


Q ss_pred             eeEEEECCChH-------------HHHHHHHHhccC--CEEEEEcCcccc
Q 018013          298 FDIIYESVGGD-------------MFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       298 ~Dvvid~~g~~-------------~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                      +|+||+|++..             ....+++.++..  ++||.++....+
T Consensus       137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~  186 (390)
T PLN02657        137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQ  186 (390)
T ss_pred             CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecccc
Confidence            99999998631             122344444443  589999887654

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0043  Score=58.02  Aligned_cols=78  Identities=22%  Similarity=0.271  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH----------hHHHH----HHHcCCc-EE--EeCCC-ccHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE----------HKAQL----LKELGVD-RV--INYKA-EDIKTVF  290 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~----------~~~~~----l~~~g~~-~v--~~~~~-~~~~~~~  290 (362)
                      .+++++|+||++|+|.++++.+...|++|++++++.          ++.+.    ++..|.. ..  .|..+ +++...+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            578999999999999999999999999999998863          23332    2334432 12  23333 2333333


Q ss_pred             HHHC--CCceeEEEECC-C
Q 018013          291 KEEF--PKGFDIIYESV-G  306 (362)
Q Consensus       291 ~~~~--~~g~Dvvid~~-g  306 (362)
                      ....  -+++|++++++ |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence            3321  14699999998 5

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.96  E-value=0.014  Score=52.52  Aligned_cols=77  Identities=17%  Similarity=0.175  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHH----HHHHcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQ----LLKELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~----~l~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .++++|+|++|++|..++..+...|++|++++++.. +.+    .++..+.. .+  .|..+ .++.+.+....  -+.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            368999999999999999998889999999987532 222    22223332 22  33333 22333333221  1459


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|.|.|
T Consensus        82 d~vi~~ag   89 (256)
T PRK12745         82 DCLVNNAG   89 (256)
T ss_pred             CEEEECCc
Confidence            99999987

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.91  E-value=0.011  Score=57.15  Aligned_cols=105  Identities=20%  Similarity=0.202  Sum_probs=70.9

Q ss_pred             HHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ...+..+.+... ++|++||-+| + |.|..+..+++..|++|++++.+++..+.+++.....-+.....++.+    . 
T Consensus       153 ~~k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~----l-  225 (383)
T PRK11705        153 EAKLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRD----L-  225 (383)
T ss_pred             HHHHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhh----c-
Confidence            344444433344 8999999998 3 678888899998899999999999999888763321111111122221    1 


Q ss_pred             CCceeEEEEC-----CCh----HHHHHHHHHhccCCEEEEEc
Q 018013          295 PKGFDIIYES-----VGG----DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       295 ~~g~Dvvid~-----~g~----~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .+.+|.|+..     +|.    ..++.+.+.|+|+|+++...
T Consensus       226 ~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        226 NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            3468988753     332    46788899999999998753

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.88  E-value=0.013  Score=55.64  Aligned_cols=75  Identities=19%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcC----CcEE-EeCCC-ccHHHHHHHHCCCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELG----VDRV-INYKA-EDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g----~~~v-~~~~~-~~~~~~~~~~~~~g~Dvv  301 (362)
                      +|++|||+||+|.+|..+++.+...|.+|++++++....... +.++    +..+ .|..+ +++.+.+.   ..++|+|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~~~d~v   79 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIA---EFKPEIV   79 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHh---hcCCCEE
Confidence            468999999999999999999999999999998765543222 2222    1111 23322 22222222   2358999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      |++++
T Consensus        80 ih~A~   84 (349)
T TIGR02622        80 FHLAA   84 (349)
T ss_pred             EECCc
Confidence            99987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.85  E-value=0.015  Score=52.53  Aligned_cols=35  Identities=26%  Similarity=0.215  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCC
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      .++++||+||+  |++|..++..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            46889999987  489999988888889999999876

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.85  E-value=0.009  Score=55.70  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecC
Q 018013          228 ASGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCG  262 (362)
Q Consensus       228 ~~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~  262 (362)
                      -.|++++|+|++  +|+|.+.++.+...|++|++.++
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            368999999985  89999999999999999999653

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.84  E-value=0.023  Score=48.46  Aligned_cols=100  Identities=25%  Similarity=0.419  Sum_probs=68.9

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHH----HcCCcE--EEeCCCccHHHHHHHHC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLK----ELGVDR--VINYKAEDIKTVFKEEF  294 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~----~~g~~~--v~~~~~~~~~~~~~~~~  294 (362)
                      |..+..++|+.++=+|+  |.|...+++++... .+||++.++++..+..+    ++|.+.  ++.....+   .+... 
T Consensus        27 ls~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~---~L~~~-  100 (187)
T COG2242          27 LSKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPE---ALPDL-  100 (187)
T ss_pred             HHhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchH---hhcCC-
Confidence            44566699998888874  44666777775433 59999999999887774    588773  33333222   22111 


Q ss_pred             CCceeEEEECCCh---HHHHHHHHHhccCCEEEEEcC
Q 018013          295 PKGFDIIYESVGG---DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       295 ~~g~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~G~  328 (362)
                       ..+|.+|-.=|+   +.++.+|..|+++||+|.-..
T Consensus       101 -~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         101 -PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             -CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence             258999876553   688999999999999987544

>PRK09135 pteridine reductase; Provisional

Probab=96.83  E-value=0.025  Score=50.50  Aligned_cols=78  Identities=17%  Similarity=0.135  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHHH----HcCC-c---EEEeCCC-ccHHHHHHHH--CCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLLK----ELGV-D---RVINYKA-EDIKTVFKEE--FPK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l~----~~g~-~---~v~~~~~-~~~~~~~~~~--~~~  296 (362)
                      .++++||+|++|++|..+++.+...|++|++++++ +++.+.+.    +... .   +..|..+ +.+...+...  .-+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999998888889999999985 33333332    2211 1   1224433 2233333322  124


Q ss_pred             ceeEEEECCC
Q 018013          297 GFDIIYESVG  306 (362)
Q Consensus       297 g~Dvvid~~g  306 (362)
                      ++|+||+++|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.81  E-value=0.0052  Score=52.09  Aligned_cols=95  Identities=21%  Similarity=0.318  Sum_probs=64.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH---
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD---  308 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~---  308 (362)
                      +|.|+||+|-+|...++-|+..|-+|++++++++|....+..-   ++..+--+.....+..  .|+|+||++.+..   
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~---i~q~Difd~~~~a~~l--~g~DaVIsA~~~~~~~   76 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVT---ILQKDIFDLTSLASDL--AGHDAVISAFGAGASD   76 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccce---eecccccChhhhHhhh--cCCceEEEeccCCCCC
Confidence            6889999999999999999999999999999999876542211   1111101111111111  5799999998731   


Q ss_pred             -------HHHHHHHHhccCC--EEEEEcCccc
Q 018013          309 -------MFNLCLKALAVYG--RLIVIGMISQ  331 (362)
Q Consensus       309 -------~~~~~~~~l~~~G--~~v~~G~~~~  331 (362)
                             ..+..+..|+.-|  |++.+|..++
T Consensus        77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence                   2344666676644  8999988776

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.81  E-value=0.014  Score=48.86  Aligned_cols=102  Identities=17%  Similarity=0.144  Sum_probs=67.5

Q ss_pred             HHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          218 ASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       218 A~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .+.++.+...  =.|++++|.| =|-+|.-+++.++.+|++|+++..++-+.-.+..-|....      .+.+.+     
T Consensus         9 ~~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~------~~~~a~-----   76 (162)
T PF00670_consen    9 LVDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM------TLEEAL-----   76 (162)
T ss_dssp             HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-------HHHHT-----
T ss_pred             HHHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec------CHHHHH-----
Confidence            3444444333  6899999999 7999999999999999999999999987777666666432      122222     


Q ss_pred             CceeEEEECCChHH--HHHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGGDM--FNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~~~--~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ...|+++.++|...  -.+-++.|+++-.+..+|....
T Consensus        77 ~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~  114 (162)
T PF00670_consen   77 RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFDV  114 (162)
T ss_dssp             TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred             hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCce
Confidence            34799999999742  3577888999888887776554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.79  E-value=0.0053  Score=60.17  Aligned_cols=137  Identities=26%  Similarity=0.313  Sum_probs=86.6

Q ss_pred             CCCCceEEEEEEeCCCCCCCCCCCeEEE-ec---------C--------CCeeeEEEeeCCCeeeCCCCCH-HHHHhhhh
Q 018013          154 DAGFEAVGLIAAVGDSVNNVKVGTPAAI-MT---------F--------GSYAEFTMVPSKHILPVARPDP-EVVAMLTS  214 (362)
Q Consensus       154 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~---------~--------g~~~~~~~v~~~~~~~ip~~~~-~~a~l~~~  214 (362)
                      .-|+|+++-+.+|++++.+.-+|+.=+. -.         .        +.|++.+        ++|.... +......+
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~--------~~~k~v~~~t~i~~~~  162 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAF--------SVAKRVRTETGIGAGA  162 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH--------HHHhhHhhhcCCCCCC
Confidence            3699999999999999888666664331 00         1        2222222        2222111 11111224


Q ss_pred             HHHHHHHHHHhC----CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHH-HHHHcCCcEEEeCCCccHHH
Q 018013          215 GLTASIALEQAG----PASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQ-LLKELGVDRVINYKAEDIKT  288 (362)
Q Consensus       215 ~~tA~~al~~~~----~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~-~l~~~g~~~v~~~~~~~~~~  288 (362)
                      ...++.++....    ..++++|+|.| +|.+|..+++.++..|+ +|+++.++.++.+ +++++|.+ +++.  .+..+
T Consensus       163 ~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~~~  238 (423)
T PRK00045        163 VSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--DELPE  238 (423)
T ss_pred             cCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHHHH
Confidence            455555654332    25789999999 69999999999999998 8999999988866 45667753 3322  12222


Q ss_pred             HHHHHCCCceeEEEECCCh
Q 018013          289 VFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~g~  307 (362)
                      .+     .++|+||+|++.
T Consensus       239 ~l-----~~aDvVI~aT~s  252 (423)
T PRK00045        239 AL-----AEADIVISSTGA  252 (423)
T ss_pred             Hh-----ccCCEEEECCCC
Confidence            21     358999999985

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.019  Score=51.98  Aligned_cols=79  Identities=16%  Similarity=0.205  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      ..+++++|+||+|++|..+++.+...|++|+++++. .++.+.+    +..+.. +.  .|..+ +++.+.+....  -+
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999888899999887653 3443333    222432 22  23333 22333332221  24


Q ss_pred             ceeEEEECCC
Q 018013          297 GFDIIYESVG  306 (362)
Q Consensus       297 g~Dvvid~~g  306 (362)
                      ++|++|+|.|
T Consensus        87 ~iD~vi~~ag   96 (258)
T PRK09134         87 PITLLVNNAS   96 (258)
T ss_pred             CCCEEEECCc
Confidence            6999999987

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.73  E-value=0.035  Score=49.56  Aligned_cols=77  Identities=21%  Similarity=0.245  Sum_probs=50.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHH--CCCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEE--FPKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~D  299 (362)
                      ++++|+||+|++|..+++.+...|++|+++ .++.++.+.+    +..+.. ++  .|..+ +++.+.+...  ..+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            479999999999999999888899998774 5555544333    223432 22  23333 2333434332  235799


Q ss_pred             EEEECCCh
Q 018013          300 IIYESVGG  307 (362)
Q Consensus       300 vvid~~g~  307 (362)
                      ++|+++|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.73  E-value=0.0088  Score=58.11  Aligned_cols=74  Identities=27%  Similarity=0.311  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCc-EE--EeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVD-RV--INYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~-~v--~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.. .+.+.. ..  .|..+.  .+ +.+.. +++|++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~--~~-v~~~l-~~IDiLInn  252 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE--AA-LAELL-EKVDILIIN  252 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH--HH-HHHHh-CCCCEEEEC
Confidence            578999999999999999998888999999999887665432 221111 12  233332  22 22222 369999999


Q ss_pred             CC
Q 018013          305 VG  306 (362)
Q Consensus       305 ~g  306 (362)
                      +|
T Consensus       253 AG  254 (406)
T PRK07424        253 HG  254 (406)
T ss_pred             CC
Confidence            87

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.013  Score=52.91  Aligned_cols=77  Identities=22%  Similarity=0.248  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC-c-EE--EeCCCc-cHHHHHHHH--CCCceeEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV-D-RV--INYKAE-DIKTVFKEE--FPKGFDII  301 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~-~-~v--~~~~~~-~~~~~~~~~--~~~g~Dvv  301 (362)
                      +++++|+|++|++|..++..+...|++|++++++.++.+.+. ++.. . ..  .|..+. .+...+...  .-+++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999888888999999999887766553 2211 1 22  333332 222222221  11468999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      +.+.|
T Consensus        82 i~~ag   86 (257)
T PRK07074         82 VANAG   86 (257)
T ss_pred             EECCC
Confidence            99987

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.69  E-value=0.031  Score=49.65  Aligned_cols=99  Identities=19%  Similarity=0.275  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEE--eCCCccHHHHHHHHCCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVI--NYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~--~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .+++++|+|++|++|..++..+...|++|+++.++....     .... ..+  |..+. +.+..+. . +++|+++++.
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~-~~~~~~~-~-~~id~lv~~a   75 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----LSGNFHFLQLDLSDD-LEPLFDW-V-PSVDILCNTA   75 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----cCCcEEEEECChHHH-HHHHHHh-h-CCCCEEEECC
Confidence            468999999999999999998888899999998864321     1111 122  22222 2333222 2 4689999998


Q ss_pred             Ch-----H----------------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          306 GG-----D----------------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       306 g~-----~----------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      |.     .                      ..+.++..+.  ..|+||.++......+.
T Consensus        76 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~  134 (235)
T PRK06550         76 GILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG  134 (235)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC
Confidence            72     0                      1122333332  35899999987765443

>PLN00016 RNA-binding protein; Provisional

Probab=96.68  E-value=0.015  Score=56.09  Aligned_cols=102  Identities=24%  Similarity=0.315  Sum_probs=67.3

Q ss_pred             CCCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEecCCHhHHHH-----------HHHcCCcEEEeCCCccHHHHHHH
Q 018013          228 ASGKKVLVT----AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQL-----------LKELGVDRVINYKAEDIKTVFKE  292 (362)
Q Consensus       228 ~~g~~VlI~----ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~-----------l~~~g~~~v~~~~~~~~~~~~~~  292 (362)
                      ...++|||+    ||+|-+|..++..+...|.+|++++++..+...           +...|+..+. .+-.++.+.   
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~D~~d~~~~---  125 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-GDPADVKSK---  125 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-ecHHHHHhh---
Confidence            344789999    999999999999988899999999987654221           2223443332 111122222   


Q ss_pred             HCCCceeEEEECCCh--HHHHHHHHHhccCC--EEEEEcCccccc
Q 018013          293 EFPKGFDIIYESVGG--DMFNLCLKALAVYG--RLIVIGMISQYQ  333 (362)
Q Consensus       293 ~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G--~~v~~G~~~~~~  333 (362)
                      ....++|+||++.+.  ......++.++..|  +||.++....|.
T Consensus       126 ~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg  170 (378)
T PLN00016        126 VAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYK  170 (378)
T ss_pred             hccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcC
Confidence            234579999999874  33455666665443  899998876554

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=96.64  E-value=0.0062  Score=54.63  Aligned_cols=94  Identities=27%  Similarity=0.388  Sum_probs=64.8

Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHH----HHH-HHcCCcEEEe--CCC-ccHHHHHHH---HCCCceeEEEECCChH
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKA----QLL-KELGVDRVIN--YKA-EDIKTVFKE---EFPKGFDIIYESVGGD  308 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~----~~l-~~~g~~~v~~--~~~-~~~~~~~~~---~~~~g~Dvvid~~g~~  308 (362)
                      +|+|.++++.+...|++|+++.++.++.    +.+ ++.+.. ++.  ..+ +++.+.+..   ..++++|++++|.+..
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~   84 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGIS   84 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESC
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence            8999999999999999999999998873    333 345654 443  333 233333322   3336799999986520


Q ss_pred             ------------------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          309 ------------------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       309 ------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                                                    ..+.+.+.++++|++|.++.......
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~  140 (241)
T PF13561_consen   85 PPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP  140 (241)
T ss_dssp             TGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB
T ss_pred             ccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc
Confidence                                          23356678899999999988766444

...

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.028  Score=50.51  Aligned_cols=34  Identities=21%  Similarity=0.317  Sum_probs=31.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      ++++|+||+|++|.++++.+...|++|+++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence            4799999999999999998888899999999876

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.63  E-value=0.033  Score=49.91  Aligned_cols=76  Identities=24%  Similarity=0.285  Sum_probs=48.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      ++++|+|++|++|..+++.+...|++|+++. ++.++.+.+    +..+.. +.+  |..+ .++.+.+....  -+.+|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            5899999999999999999988999988764 444444332    223332 222  3222 23333333221  24699


Q ss_pred             EEEECCC
Q 018013          300 IIYESVG  306 (362)
Q Consensus       300 vvid~~g  306 (362)
                      ++|.++|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9999987

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.60  E-value=0.043  Score=48.83  Aligned_cols=78  Identities=24%  Similarity=0.328  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +.++|||+||+|++|..+++.+...|++|+++.++..+ .+.+    ...+.. ++  .|..+ +++.+.+....  -++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999998776654432 2222    223322 22  23333 22333332221  246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|++.|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            999999987

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.59  E-value=0.035  Score=50.52  Aligned_cols=76  Identities=17%  Similarity=0.139  Sum_probs=48.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH-HHc----CCc-EE--EeCCCcc-H----HHHHHHH--C
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL-KEL----GVD-RV--INYKAED-I----KTVFKEE--F  294 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l-~~~----g~~-~v--~~~~~~~-~----~~~~~~~--~  294 (362)
                      .+++|+||++++|..+++.+...|++|+++++. +++.+.+ +++    +.. ..  .|..+.+ +    .+.+...  .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            478999999999999999999999999998653 4444333 222    221 11  2444322 1    2222221  1


Q ss_pred             CCceeEEEECCC
Q 018013          295 PKGFDIIYESVG  306 (362)
Q Consensus       295 ~~g~Dvvid~~g  306 (362)
                      -+++|++++|+|
T Consensus        82 ~g~iD~lv~nAG   93 (267)
T TIGR02685        82 FGRCDVLVNNAS   93 (267)
T ss_pred             cCCceEEEECCc
Confidence            246999999987

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.57  E-value=0.045  Score=52.12  Aligned_cols=77  Identities=27%  Similarity=0.322  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc--CCc-EEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL--GVD-RVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~--g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+. .+  +.. .++..+-.+... +.... .++|+||.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~-~~~d~Vih   85 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGS-FDEAV-KGCDGVFH   85 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHH-HHHHH-cCCCEEEE
Confidence            56789999999999999999999889999999988766554432 21  111 222222122222 22221 25899999


Q ss_pred             CCC
Q 018013          304 SVG  306 (362)
Q Consensus       304 ~~g  306 (362)
                      +++
T Consensus        86 ~A~   88 (353)
T PLN02896         86 VAA   88 (353)
T ss_pred             CCc
Confidence            886

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.56  E-value=0.011  Score=55.45  Aligned_cols=104  Identities=25%  Similarity=0.361  Sum_probs=70.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cC----CcE----EEeCCC-ccHHHHHHHH--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LG----VDR----VINYKA-EDIKTVFKEE--FP  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g----~~~----v~~~~~-~~~~~~~~~~--~~  295 (362)
                      -.+.+++|+|+++|+|..++..+...|++|+.++++.++.+.+++ +.    ...    .+|..+ .++.......  ..
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999999877666642 21    222    223333 2222222222  23


Q ss_pred             CceeEEEECCCh---------H---------------HHHHHHHHhccC--CEEEEEcCccc
Q 018013          296 KGFDIIYESVGG---------D---------------MFNLCLKALAVY--GRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~---------~---------------~~~~~~~~l~~~--G~~v~~G~~~~  331 (362)
                      ...|+.++++|-         +               .....+..|+..  +|||.+.+...
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence            568999999882         1               233455666544  89999998664

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.47  E-value=0.037  Score=52.04  Aligned_cols=99  Identities=27%  Similarity=0.328  Sum_probs=67.2

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      .....+++++||..| + |.|..++.+++..+.  +|++++.+++..+.++    +.|.+.+.... .+..+...  ...
T Consensus        74 ~~L~i~~g~~VLDIG-~-GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-gD~~~~~~--~~~  148 (322)
T PRK13943         74 EWVGLDKGMRVLEIG-G-GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-GDGYYGVP--EFA  148 (322)
T ss_pred             HhcCCCCCCEEEEEe-C-CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CChhhccc--ccC
Confidence            334447899999999 4 469999999998764  7999999988766554    46665332221 12222111  114


Q ss_pred             ceeEEEECCCh-HHHHHHHHHhccCCEEEEE
Q 018013          297 GFDIIYESVGG-DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       297 g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~  326 (362)
                      .+|+|+.+.+- ......++.|+++|+++..
T Consensus       149 ~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        149 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            59999998774 4455778899999998763

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.45  E-value=0.026  Score=54.10  Aligned_cols=95  Identities=17%  Similarity=0.184  Sum_probs=67.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcC---Cc-EEEeCCCc-cHHHHHHHHCCCceeEEEEC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELG---VD-RVINYKAE-DIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g---~~-~v~~~~~~-~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+|||.| +|++|+.+++.+.+.| .+|++.+++.++.+.+....   .. ..+|..+. .+.+.+   .  +.|+||+|
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li---~--~~d~VIn~   75 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALI---K--DFDLVINA   75 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHH---h--cCCEEEEe
Confidence            5799999 5999999999988888 79999999999998886653   22 34454442 233333   2  34999999


Q ss_pred             CChHHHHHHH-HHhccCCEEEEEcCccc
Q 018013          305 VGGDMFNLCL-KALAVYGRLIVIGMISQ  331 (362)
Q Consensus       305 ~g~~~~~~~~-~~l~~~G~~v~~G~~~~  331 (362)
                      .....-..++ .|++.+=.++.+.....
T Consensus        76 ~p~~~~~~i~ka~i~~gv~yvDts~~~~  103 (389)
T COG1748          76 APPFVDLTILKACIKTGVDYVDTSYYEE  103 (389)
T ss_pred             CCchhhHHHHHHHHHhCCCEEEcccCCc
Confidence            9975444444 56666667777765544

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.45  E-value=0.032  Score=51.16  Aligned_cols=92  Identities=16%  Similarity=0.105  Sum_probs=61.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc---CCcEEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL---GVDRVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~---g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      ..+++++|.| +|++|.+++..+...|++|+++.++.++.+.+. ++   +........     +    .....+|+|++
T Consensus       115 ~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~----~~~~~~DivIn  184 (270)
T TIGR00507       115 RPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----E----LPLHRVDLIIN  184 (270)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----h----hcccCccEEEE
Confidence            5688999999 589999999888888999999999988776653 32   221222111     1    11135899999


Q ss_pred             CCChHHH------HHHHHHhccCCEEEEEcCc
Q 018013          304 SVGGDMF------NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       304 ~~g~~~~------~~~~~~l~~~G~~v~~G~~  329 (362)
                      |++..+.      ......++++..++++...
T Consensus       185 atp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~  216 (270)
T TIGR00507       185 ATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN  216 (270)
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            9884211      1124567777788887543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN00015 protochlorophyllide reductase

Probab=96.44  E-value=0.027  Score=52.62  Aligned_cols=73  Identities=16%  Similarity=0.275  Sum_probs=49.7

Q ss_pred             EEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHH-HcCC---c-E--EEeCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          234 LVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLK-ELGV---D-R--VINYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~-~~g~---~-~--v~~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      +|+||++|+|.++++.+...| ++|++++++.++.+.+. +++.   . .  ..|..+ +++.+.+....  .+++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999998888889 89999999887765543 3321   1 1  234443 23333333321  24699999


Q ss_pred             ECCC
Q 018013          303 ESVG  306 (362)
Q Consensus       303 d~~g  306 (362)
                      +++|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9987

>PRK04148 hypothetical protein; Provisional

Probab=96.43  E-value=0.066  Score=43.43  Aligned_cols=88  Identities=17%  Similarity=0.163  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeC-CCccHHHHHHHHCCCceeEEEEC
Q 018013          226 GPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY-KAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       226 ~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~-~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      ...++.++++.| .| .|...+..+...|.+|++++.+++..+.+++.+.+.+.+. .+.++.-.      +++|+++.+
T Consensus        13 ~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y------~~a~liysi   84 (134)
T PRK04148         13 EKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIY------KNAKLIYSI   84 (134)
T ss_pred             ccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHH------hcCCEEEEe
Confidence            335678999999 67 8876666666789999999999999999988887655432 23332111      468999998


Q ss_pred             CCh-HHHHHHHHHhccCC
Q 018013          305 VGG-DMFNLCLKALAVYG  321 (362)
Q Consensus       305 ~g~-~~~~~~~~~l~~~G  321 (362)
                      -.. ++....+++-++-|
T Consensus        85 rpp~el~~~~~~la~~~~  102 (134)
T PRK04148         85 RPPRDLQPFILELAKKIN  102 (134)
T ss_pred             CCCHHHHHHHHHHHHHcC
Confidence            875 55555555554444

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.41  E-value=0.025  Score=46.98  Aligned_cols=102  Identities=26%  Similarity=0.237  Sum_probs=66.8

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHH-HHcCCcEEEeCCCccHHHHHHHHCCCc
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l-~~~g~~~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      ++..... ..+++++|+| +|++|...++.+...| .+|++++++.++.+.+ ++++... +.....+..+.     -.+
T Consensus         9 a~~~~~~~~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~   81 (155)
T cd01065           9 ALEEAGIELKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEEL-----LAE   81 (155)
T ss_pred             HHHhhCCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhc-----ccc
Confidence            4444444 6678999999 5999999999888886 6899999988877665 4455421 00011122211     256


Q ss_pred             eeEEEECCChHHH-----HHHHHHhccCCEEEEEcCc
Q 018013          298 FDIIYESVGGDMF-----NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       298 ~Dvvid~~g~~~~-----~~~~~~l~~~G~~v~~G~~  329 (362)
                      +|+|++|++....     ......++++..++.++..
T Consensus        82 ~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          82 ADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             CCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence            8999999886432     1223457788888888664

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=96.41  E-value=0.04  Score=49.86  Aligned_cols=39  Identities=26%  Similarity=0.306  Sum_probs=31.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----CCCEEEEecCCHhHHHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKL----AGNTVVATCGGEHKAQLL  270 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~----~G~~Vi~~~~~~~~~~~l  270 (362)
                      .++|+|+++++|.+++..+..    .|++|+.+.+++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~   44 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL   44 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH
Confidence            589999999999887764433    799999999988876655

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=96.41  E-value=0.079  Score=49.90  Aligned_cols=98  Identities=12%  Similarity=0.174  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHH-HcCC-c-EEE--eCCCc-cHHHHHHHHCCCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLK-ELGV-D-RVI--NYKAE-DIKTVFKEEFPKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~-~~g~-~-~v~--~~~~~-~~~~~~~~~~~~g~Dv  300 (362)
                      .|++|||+||+|.+|..+++.+...|  .+|++++++..+...+. .+.. . .++  |..+. .+.+.+     .++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~-----~~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL-----RGVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH-----hcCCE
Confidence            47899999999999999988777665  68999888766544332 2221 1 122  33332 122222     24899


Q ss_pred             EEECCChH------------------HHHHHHHHhccC--CEEEEEcCccc
Q 018013          301 IYESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQ  331 (362)
Q Consensus       301 vid~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~  331 (362)
                      ||+++|..                  .....++.+.+.  ++||.+++...
T Consensus        78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~  128 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA  128 (324)
T ss_pred             EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence            99998721                  111333444433  58999887544

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.056  Score=48.38  Aligned_cols=77  Identities=19%  Similarity=0.301  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +++++|+|++|++|..+++.+...|++|+.+. +++++.+.+    +..+... ++  |..+ +.+.+.+....  .+.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999988888999887775 344433332    3334332 22  3333 22333333221  2468


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |+++++.|
T Consensus        82 d~li~~ag   89 (248)
T PRK06123         82 DALVNNAG   89 (248)
T ss_pred             CEEEECCC
Confidence            99999987

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.41  E-value=0.046  Score=48.27  Aligned_cols=102  Identities=19%  Similarity=0.260  Sum_probs=73.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHH----HcCCcEEEeCCC-ccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLK----ELGVDRVINYKA-EDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dv  300 (362)
                      ++.++||=+|  +++|..++.+|..+.  .+++.+..++++.+.++    +.|.+..+...- .+..+.+.....+.+|+
T Consensus        58 ~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDl  135 (219)
T COG4122          58 SGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDL  135 (219)
T ss_pred             cCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccE
Confidence            5778899888  678888999998776  48999999999887775    467764322222 34455555433467998


Q ss_pred             EEECCC-h---HHHHHHHHHhccCCEEEEEcCccc
Q 018013          301 IYESVG-G---DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       301 vid~~g-~---~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ||--+. .   ..++.++++|++||-+|.=.....
T Consensus       136 iFIDadK~~yp~~le~~~~lLr~GGliv~DNvl~~  170 (219)
T COG4122         136 VFIDADKADYPEYLERALPLLRPGGLIVADNVLFG  170 (219)
T ss_pred             EEEeCChhhCHHHHHHHHHHhCCCcEEEEeecccC
Confidence            876555 2   689999999999999887655444

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.32  E-value=0.063  Score=47.79  Aligned_cols=74  Identities=18%  Similarity=0.245  Sum_probs=46.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHH--CCCceeEE
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEE--FPKGFDII  301 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~Dvv  301 (362)
                      ++|+|++|++|..+++.+...|++|++++++ +++.+.+    ++.+.. ++  .|..+ +++.+.+...  ..+.+|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999888764 3333322    233432 22  23333 2233333221  12468999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      +.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            99876

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=96.30  E-value=0.032  Score=49.04  Aligned_cols=107  Identities=21%  Similarity=0.294  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC-----cEEE-eCC---CccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV-----DRVI-NYK---AEDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~-----~~v~-~~~---~~~~~~~~~~~~--~~g  297 (362)
                      .|++++++|++||+|++....+...|+++.++..+.|+.+...++.+     ..+| .++   ..++.+..++..  =+.
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            38999999999999999999999999999999888887766655433     1222 222   133333333321  145


Q ss_pred             eeEEEECCCh--H----------------HHHHHHHHh-----ccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG--D----------------MFNLCLKAL-----AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~--~----------------~~~~~~~~l-----~~~G~~v~~G~~~~~~~~  335 (362)
                      +|+++|..|-  +                ....++..+     .++|.+|.+++..+..+.
T Consensus        84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~  144 (261)
T KOG4169|consen   84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM  144 (261)
T ss_pred             eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc
Confidence            9999999882  1                111233333     368999999998876654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.23  E-value=0.21  Score=43.58  Aligned_cols=91  Identities=18%  Similarity=0.173  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      -.|++++|.| .|.+|..+++.+...|++|++++.+.++.+.+.+ +|+. .++..  +       .....+|+++.|..
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~--~-------l~~~~~Dv~vp~A~   94 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE--E-------IYSVDADVFAPCAL   94 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch--h-------hccccCCEEEeccc
Confidence            5688999999 6899999999999999999999999888777654 4643 23221  1       11224788887654


Q ss_pred             h-HHHHHHHHHhccCCEEEEEcCccc
Q 018013          307 G-DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       307 ~-~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      + ..-...++.|+  .++|.-|..+.
T Consensus        95 ~~~I~~~~~~~l~--~~~v~~~AN~~  118 (200)
T cd01075          95 GGVINDDTIPQLK--AKAIAGAANNQ  118 (200)
T ss_pred             ccccCHHHHHHcC--CCEEEECCcCc
Confidence            3 22233344443  44444444443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02214 cinnamoyl-CoA reductase

Probab=96.23  E-value=0.052  Score=51.57  Aligned_cols=98  Identities=23%  Similarity=0.332  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHH--HHHHc-C--Cc-EEE--eCCCc-cHHHHHHHHCCCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ--LLKEL-G--VD-RVI--NYKAE-DIKTVFKEEFPKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~--~l~~~-g--~~-~v~--~~~~~-~~~~~~~~~~~~g~  298 (362)
                      .++++|+|+||+|.+|..++..+...|.+|++++++.++..  .+..+ +  .. .++  |..+. .+.+.+     .++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~   82 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI-----DGC   82 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH-----hcC
Confidence            45789999999999999999999999999999988755321  12222 1  11 122  22221 222222     258


Q ss_pred             eEEEECCCh------H-------HHHHHHHHhccC--CEEEEEcCcc
Q 018013          299 DIIYESVGG------D-------MFNLCLKALAVY--GRLIVIGMIS  330 (362)
Q Consensus       299 Dvvid~~g~------~-------~~~~~~~~l~~~--G~~v~~G~~~  330 (362)
                      |+||++++.      .       .....++.+++.  ++||.+++..
T Consensus        83 d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~  129 (342)
T PLN02214         83 DGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIG  129 (342)
T ss_pred             CEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccce
Confidence            999999873      1       122344444444  4899888753

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=96.23  E-value=0.045  Score=51.86  Aligned_cols=34  Identities=21%  Similarity=0.271  Sum_probs=31.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      ++|||+||+|.+|..+++.+...|.+|++++++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~   34 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS   34 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence            4799999999999999999999999999998764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.21  E-value=0.026  Score=53.96  Aligned_cols=79  Identities=22%  Similarity=0.172  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEecCCHh--H--------------HHHHHHcCCc-EEE--eCCC-cc
Q 018013          228 ASGKKVLVTAAAGGTGQF--AVQLAKLAGNTVVATCGGEH--K--------------AQLLKELGVD-RVI--NYKA-ED  285 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~--aiqla~~~G~~Vi~~~~~~~--~--------------~~~l~~~g~~-~v~--~~~~-~~  285 (362)
                      ..++++||+|+++++|++  .++.+ ..|++|+++....+  +              .+.+++.|.. ..+  |..+ +.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            557999999999999999  56666 88999888863221  1              2234456654 223  3333 22


Q ss_pred             HHHHHHHHC--CCceeEEEECCCh
Q 018013          286 IKTVFKEEF--PKGFDIIYESVGG  307 (362)
Q Consensus       286 ~~~~~~~~~--~~g~Dvvid~~g~  307 (362)
                      ..+.+....  -+++|+++++++.
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~  141 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcc
Confidence            333333321  1469999999884

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.20  E-value=0.0078  Score=55.28  Aligned_cols=95  Identities=28%  Similarity=0.402  Sum_probs=59.6

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc--EEEeCCCccHHHHHHHHCCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD--RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~--~v~~~~~~~~~~~~~~~~~~  296 (362)
                      .++..++|++||-+| + |-|..+..+|+..|++|++++.+++..++++    +.|..  .-+...  ++.+    . ..
T Consensus        56 ~~~~l~~G~~vLDiG-c-GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~--D~~~----~-~~  126 (273)
T PF02353_consen   56 EKLGLKPGDRVLDIG-C-GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ--DYRD----L-PG  126 (273)
T ss_dssp             TTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---GGG--------
T ss_pred             HHhCCCCCCEEEEeC-C-CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe--eccc----c-CC
Confidence            344449999999999 4 4788888999988999999999999888875    35542  111111  1111    1 12


Q ss_pred             ceeEEEEC-----CCh----HHHHHHHHHhccCCEEEEE
Q 018013          297 GFDIIYES-----VGG----DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       297 g~Dvvid~-----~g~----~~~~~~~~~l~~~G~~v~~  326 (362)
                      .+|.|+..     +|.    ..++.+.+.|+|+|+++.-
T Consensus       127 ~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  127 KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            68887653     442    4688999999999999743

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.14  E-value=0.02  Score=48.16  Aligned_cols=78  Identities=27%  Similarity=0.276  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeC--CCccHHHHHHHHCC-CceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY--KAEDIKTVFKEEFP-KGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~--~~~~~~~~~~~~~~-~g~Dvvid~~  305 (362)
                      .|..|+++|+.-|+|+..++-+...|++|+++.++++.+..+.+.-..++...  +-.+|....+.+.. ..+|..+|++
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA   85 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA   85 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence            58899999988899999999999999999999999999888765444333322  11334444333332 3467777777


Q ss_pred             C
Q 018013          306 G  306 (362)
Q Consensus       306 g  306 (362)
                      |
T Consensus        86 g   86 (245)
T KOG1207|consen   86 G   86 (245)
T ss_pred             h
Confidence            6

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.10  E-value=0.053  Score=46.88  Aligned_cols=93  Identities=24%  Similarity=0.366  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      +++.+||-.|.  |.|..++.+++. .+++|++++.+++..+.++    +.+.+. +.....+..+. .  ..+.+|+|+
T Consensus        44 ~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d~~~~-~--~~~~fDlV~  117 (187)
T PRK00107         44 PGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGRAEEF-G--QEEKFDVVT  117 (187)
T ss_pred             CCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEeccHhhC-C--CCCCccEEE
Confidence            45889999883  345555555554 4579999999988776664    355542 22222222221 1  135699999


Q ss_pred             ECCCh---HHHHHHHHHhccCCEEEEE
Q 018013          303 ESVGG---DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       303 d~~g~---~~~~~~~~~l~~~G~~v~~  326 (362)
                      -....   +.++.+.+.|+++|+++.+
T Consensus       118 ~~~~~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        118 SRAVASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             EccccCHHHHHHHHHHhcCCCeEEEEE
Confidence            75432   6788899999999999988

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.09  E-value=0.053  Score=48.28  Aligned_cols=90  Identities=26%  Similarity=0.339  Sum_probs=61.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh--HHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC---h
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH--KAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG---G  307 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~--~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g---~  307 (362)
                      |+|+||+|.+|...++.+...+.+|.+.+++..  ..+.++..|+..+ ..+-.+........  +|+|.||.+.+   .
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al--~g~d~v~~~~~~~~~   77 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAAL--KGVDAVFSVTPPSHP   77 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHH--TTCSEEEEESSCSCC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHH--cCCceEEeecCcchh
Confidence            799999999999999999998899999999754  3556677888644 33322333332223  47999999988   2


Q ss_pred             ---HHHHHHHHHhccCC--EEEE
Q 018013          308 ---DMFNLCLKALAVYG--RLIV  325 (362)
Q Consensus       308 ---~~~~~~~~~l~~~G--~~v~  325 (362)
                         +.....+++.++-|  +||.
T Consensus        78 ~~~~~~~~li~Aa~~agVk~~v~  100 (233)
T PF05368_consen   78 SELEQQKNLIDAAKAAGVKHFVP  100 (233)
T ss_dssp             CHHHHHHHHHHHHHHHT-SEEEE
T ss_pred             hhhhhhhhHHHhhhccccceEEE
Confidence               23444555555544  6653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=96.08  E-value=0.078  Score=50.45  Aligned_cols=48  Identities=23%  Similarity=0.094  Sum_probs=40.8

Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      |||.-|+....-++++|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 ~~~~~~~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~   49 (348)
T PRK15181          2 TAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS   49 (348)
T ss_pred             chhhhhhhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            677777666666668999999999999999999998999999998743

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.07  E-value=0.037  Score=50.90  Aligned_cols=96  Identities=13%  Similarity=0.161  Sum_probs=63.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcE-EEeCCCcc-HHHHHHHHCC-Cc-eeEEEECCCh
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDR-VINYKAED-IKTVFKEEFP-KG-FDIIYESVGG  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~-v~~~~~~~-~~~~~~~~~~-~g-~Dvvid~~g~  307 (362)
                      +|+|+||+|.+|..+++.+...|.+|.++++++++..   ..+... ..|..+.+ +.+.++.... .| +|.+|-+.+.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~   77 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP   77 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence            4899999999999999998889999999999876542   224332 24555432 3333322111 46 9999988763


Q ss_pred             -----HHHHHHHHHhccCC--EEEEEcCcc
Q 018013          308 -----DMFNLCLKALAVYG--RLIVIGMIS  330 (362)
Q Consensus       308 -----~~~~~~~~~l~~~G--~~v~~G~~~  330 (362)
                           ......++.++..|  +||.++...
T Consensus        78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~  107 (285)
T TIGR03649        78 IPDLAPPMIKFIDFARSKGVRRFVLLSASI  107 (285)
T ss_pred             CCChhHHHHHHHHHHHHcCCCEEEEeeccc
Confidence                 23445555555554  798887643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.07  E-value=0.056  Score=47.68  Aligned_cols=95  Identities=26%  Similarity=0.279  Sum_probs=64.1

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCCcE--EEeCCCccHHHHHHHHCCC
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGVDR--VINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~~~--v~~~~~~~~~~~~~~~~~~  296 (362)
                      +..+++++||-.|  .|.|..+..+++..+  .+|+.++.+++-.+.+++    .|.+.  ++..+....   .  ....
T Consensus        72 l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~---~--~~~~  144 (212)
T PRK13942         72 LDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG---Y--EENA  144 (212)
T ss_pred             cCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC---C--CcCC
Confidence            3348999999998  466778888888765  599999999887776643    45432  222221110   0  1125


Q ss_pred             ceeEEEECCC-hHHHHHHHHHhccCCEEEEE
Q 018013          297 GFDIIYESVG-GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       297 g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~  326 (362)
                      .+|+|+-... ....+..++.|+++|+++..
T Consensus       145 ~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        145 PYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            6999876544 45667888999999998874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.04  E-value=0.023  Score=56.74  Aligned_cols=71  Identities=21%  Similarity=0.205  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .+|++|+|.| .|..|++++++++..|++|++++..+.+.+.++++|+..+ .... . .+.+     ..+|+|+.+.|-
T Consensus        10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~-~-~~~l-----~~~D~VV~SpGi   80 (488)
T PRK03369         10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD-A-VQQI-----ADYALVVTSPGF   80 (488)
T ss_pred             cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc-h-HhHh-----hcCCEEEECCCC
Confidence            5788999999 7999999999999999999999987766666777787443 2211 1 1111     247999999884

>PLN02240 UDP-glucose 4-epimerase

Probab=96.03  E-value=0.11  Score=49.30  Aligned_cols=35  Identities=37%  Similarity=0.395  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      .+++|+|+||+|.+|..+++.+...|.+|+++++.
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999988889999998753

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.03  E-value=0.031  Score=46.90  Aligned_cols=80  Identities=23%  Similarity=0.275  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH-HHHHHcCCcEEEeCCC----ccHHHHHHHHCC--CceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA-QLLKELGVDRVINYKA----EDIKTVFKEEFP--KGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~-~~l~~~g~~~v~~~~~----~~~~~~~~~~~~--~g~Dv  300 (362)
                      .+|-.-+|+|+++|+|.+++.-+...|+.|+..+-...|- +.++++|-..+|.+.+    ++....+....+  +..|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            4567779999999999999999888999999998766654 5568899888877655    333333322222  45899


Q ss_pred             EEECCCh
Q 018013          301 IYESVGG  307 (362)
Q Consensus       301 vid~~g~  307 (362)
                      .+||.|-
T Consensus        87 ~vncagi   93 (260)
T KOG1199|consen   87 LVNCAGI   93 (260)
T ss_pred             eeeccce
Confidence            9999984

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.02  E-value=0.11  Score=41.01  Aligned_cols=96  Identities=18%  Similarity=0.300  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHH----HcCCc--EEEeCCCccHHHHHHHHCCCce
Q 018013          226 GPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLK----ELGVD--RVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       226 ~~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~----~~g~~--~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      ..+++++|+-.| + |.|..+..+++..+ .+|++++.++...+.++    .++..  .++..+....   .. .....+
T Consensus        16 ~~~~~~~vldlG-~-G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~   89 (124)
T TIGR02469        16 RLRPGDVLWDIG-A-GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LE-DSLPEP   89 (124)
T ss_pred             CCCCCCEEEEeC-C-CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Ch-hhcCCC
Confidence            336678899998 4 44888888998765 69999999988877764    34443  2222221110   00 112469


Q ss_pred             eEEEECCCh----HHHHHHHHHhccCCEEEEEc
Q 018013          299 DIIYESVGG----DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       299 Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G  327 (362)
                      |+|+...+.    +.++.+.+.|+++|+|+.-.
T Consensus        90 D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        90 DRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             CEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            999976542    47888999999999998754

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK00811 spermidine synthase; Provisional

Probab=96.00  E-value=0.17  Score=46.83  Aligned_cols=96  Identities=19%  Similarity=0.260  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcC------C--cEEEeCCCccHHHHHHHHCCCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELG------V--DRVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g------~--~~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      ...++||+.|  +|.|..+..+++..+. +|.++..+++-.+.+++.-      .  +.-+.....+..+.+.. ..+.+
T Consensus        75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~y  151 (283)
T PRK00811         75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAE-TENSF  151 (283)
T ss_pred             CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhh-CCCcc
Confidence            5578999999  3557777777887665 8999999988887776521      1  10011111333333333 44579


Q ss_pred             eEEEECCC-----------hHHHHHHHHHhccCCEEEEE
Q 018013          299 DIIYESVG-----------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       299 Dvvid~~g-----------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      |+|+-...           .+.++.+.+.|+++|.++.-
T Consensus       152 DvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        152 DVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             cEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            99987542           24567889999999999874

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.00  E-value=0.094  Score=45.21  Aligned_cols=94  Identities=19%  Similarity=0.234  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-C-CEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHH-HCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-G-NTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKE-EFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G-~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~-~~~~g~Dvvid  303 (362)
                      ++|++||..| +|. |..+..+++.. + .+|++++.++..    ...++..+ .|..+....+.+.. ..+.++|+|+.
T Consensus        31 ~~g~~VLDiG-~Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~  104 (188)
T TIGR00438        31 KPGDTVLDLG-AAP-GGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDVVMS  104 (188)
T ss_pred             CCCCEEEEec-CCC-CHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCccEEEc
Confidence            8999999999 343 33344444443 3 489999998753    11234322 24333333333333 34567999995


Q ss_pred             CC-----C-------------hHHHHHHHHHhccCCEEEEEc
Q 018013          304 SV-----G-------------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       304 ~~-----g-------------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      ..     |             ...++.+.++|+++|+++...
T Consensus       105 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       105 DAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             CCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            32     2             235778899999999999864

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.99  E-value=0.057  Score=52.81  Aligned_cols=134  Identities=22%  Similarity=0.307  Sum_probs=87.2

Q ss_pred             CCCCceEEEEEEeCCCCCCCCCCCeEEEec-------------------CCCeeeEEEeeCCCeee---CCCCCHHHHHh
Q 018013          154 DAGFEAVGLIAAVGDSVNNVKVGTPAAIMT-------------------FGSYAEFTMVPSKHILP---VARPDPEVVAM  211 (362)
Q Consensus       154 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------~g~~~~~~~v~~~~~~~---ip~~~~~~a~l  211 (362)
                      .-|.|+++.+.+|++++.+.-+|+.=+ +.                   .+.|++++.++. .+..   +...       
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE~qI-~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~-------  159 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGETQI-LGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAG-------  159 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCChHH-HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCC-------
Confidence            368899999999999988866676543 21                   256666666655 2221   2111       


Q ss_pred             hhhHHHHHH----HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHH-HHHHcCCcEEEeCCCcc
Q 018013          212 LTSGLTASI----ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQ-LLKELGVDRVINYKAED  285 (362)
Q Consensus       212 ~~~~~tA~~----al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~-~l~~~g~~~v~~~~~~~  285 (362)
                        +...++.    +.......++++|+|.| +|.+|..+++.++..| .+|+++.++.++.+ .++++|.. .++.  .+
T Consensus       160 --~vSv~~~Av~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~--~~  233 (417)
T TIGR01035       160 --AVSISSAAVELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF--ED  233 (417)
T ss_pred             --CcCHHHHHHHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH--HH
Confidence              1111222    22233336789999999 6999999999999999 58999999988765 44567753 2222  12


Q ss_pred             HHHHHHHHCCCceeEEEECCCh
Q 018013          286 IKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       286 ~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ..+.+     .++|+||+|++.
T Consensus       234 l~~~l-----~~aDvVi~aT~s  250 (417)
T TIGR01035       234 LEEYL-----AEADIVISSTGA  250 (417)
T ss_pred             HHHHH-----hhCCEEEECCCC
Confidence            22222     358999999985

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=95.94  E-value=0.018  Score=50.70  Aligned_cols=99  Identities=27%  Similarity=0.314  Sum_probs=63.2

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHH----HcCCcEE-EeCCCccHHHHHHHHC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLK----ELGVDRV-INYKAEDIKTVFKEEF  294 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~----~~g~~~v-~~~~~~~~~~~~~~~~  294 (362)
                      +..+..++|++||-+|  +|.|..++-+++..|.  +|+.+...++-.+.++    .++.+.+ +...+..  .-.  ..
T Consensus        65 l~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~--~g~--~~  138 (209)
T PF01135_consen   65 LEALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGS--EGW--PE  138 (209)
T ss_dssp             HHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GG--GTT--GG
T ss_pred             HHHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchh--hcc--cc
Confidence            4444459999999998  5678888888888775  6999998877555553    4666422 2222211  000  11


Q ss_pred             CCceeEEEECCCh-HHHHHHHHHhccCCEEEEE
Q 018013          295 PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~  326 (362)
                      ...+|.|+-+.+- +.-...++.|++||++|..
T Consensus       139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            2469999988774 4456788999999999983

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.94  E-value=0.055  Score=49.87  Aligned_cols=94  Identities=18%  Similarity=0.194  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      ..+++++|.| +|++|.+++..+...| .+|+++.++.++.+.+.+ ++....+.. ..+..+     .-..+|+|++|+
T Consensus       121 ~~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~-----~~~~~DivInaT  193 (278)
T PRK00258        121 LKGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQE-----ELADFDLIINAT  193 (278)
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchh-----ccccCCEEEECC
Confidence            5678999999 6999999999999999 599999999988777643 332110111 001111     114589999998


Q ss_pred             ChHHH------HHHHHHhccCCEEEEEcC
Q 018013          306 GGDMF------NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       306 g~~~~------~~~~~~l~~~G~~v~~G~  328 (362)
                      ...+.      ......+.+...++++-.
T Consensus       194 p~g~~~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        194 SAGMSGELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             cCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence            74221      123456777777777743

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=95.94  E-value=0.035  Score=51.90  Aligned_cols=97  Identities=22%  Similarity=0.270  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-cHHHHHHHHCCCceeEEEECCCh--
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAE-DIKTVFKEEFPKGFDIIYESVGG--  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~--  307 (362)
                      +|+|+|++|.+|..+++.+...|.+|+++++++++...+...++..+ .|..+. .+.+.+     .++|+||++++.  
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~-----~~~d~vi~~a~~~~   76 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAV-----AGCRALFHVAADYR   76 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHH-----hCCCEEEEeceecc
Confidence            69999999999999999998899999999997765444433444322 233332 222222     258999998752  


Q ss_pred             -------HH-------HHHHHHHhccC--CEEEEEcCccccc
Q 018013          308 -------DM-------FNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       308 -------~~-------~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                             ..       ....++.+...  ++||.+++...+.
T Consensus        77 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~  118 (328)
T TIGR03466        77 LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLG  118 (328)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcC
Confidence                   01       11233333333  5899988865543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.93  E-value=0.055  Score=50.63  Aligned_cols=91  Identities=15%  Similarity=0.136  Sum_probs=62.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ..+|.|+| .|.+|...+..++..|.  +|+++++++++.+.+++.|......   .+..+.+     ...|+||.|+..
T Consensus         6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHh-----cCCCEEEECCCH
Confidence            36799999 89999999999888885  8999999998888888877531111   1122221     357899999885


Q ss_pred             HH----HHHHHHHhccCCEEEEEcCc
Q 018013          308 DM----FNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 ~~----~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ..    +......++++..++.+|..
T Consensus        77 ~~~~~v~~~l~~~l~~~~iv~dvgs~  102 (307)
T PRK07502         77 GASGAVAAEIAPHLKPGAIVTDVGSV  102 (307)
T ss_pred             HHHHHHHHHHHhhCCCCCEEEeCccc
Confidence            43    33333455667777776653

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.90  E-value=0.045  Score=51.33  Aligned_cols=73  Identities=22%  Similarity=0.354  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCC--c-EEE--eCCCc-cHHHHHHHHCCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGV--D-RVI--NYKAE-DIKTVFKEEFPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~--~-~v~--~~~~~-~~~~~~~~~~~~g~  298 (362)
                      .+++|||+||+|.+|..++..+...|++|++++++.++.+....    .+.  . +++  |..+. ++.+.+     .++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-----~~~   78 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI-----DGC   78 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH-----cCC
Confidence            57899999999999999999998899999988776554332211    121  1 222  33332 222222     258


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |+||++++
T Consensus        79 d~vih~A~   86 (325)
T PLN02989         79 ETVFHTAS   86 (325)
T ss_pred             CEEEEeCC
Confidence            99999987

>PLN02366 spermidine synthase

Probab=95.85  E-value=0.17  Score=47.24  Aligned_cols=98  Identities=19%  Similarity=0.161  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCc--EEE-----eCCCccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVD--RVI-----NYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~--~v~-----~~~~~~~~~~~~~~~~~g~D  299 (362)
                      ...++||+.|+  |-|..+..+++.-+. +|.++..+++-.+.++++-..  ..+     .....|..+.++...++.+|
T Consensus        90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD  167 (308)
T PLN02366         90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD  167 (308)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence            56789999994  336667778887664 888888888777777653110  001     11113333444433345799


Q ss_pred             EEEECCCh-----------HHHHHHHHHhccCCEEEEEc
Q 018013          300 IIYESVGG-----------DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       300 vvid~~g~-----------~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +||.-...           +.++.+.++|+++|.++.-+
T Consensus       168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            98874321           46788999999999997643

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=95.80  E-value=0.15  Score=47.99  Aligned_cols=98  Identities=19%  Similarity=0.218  Sum_probs=58.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HH---HHHHHcC-Cc-EE--EeCCCcc-HHHHHHHHCCCceeEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KA---QLLKELG-VD-RV--INYKAED-IKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~---~~l~~~g-~~-~v--~~~~~~~-~~~~~~~~~~~g~Dvvi  302 (362)
                      +|||+||+|.+|..++..+...|.+|+++++..+ +.   ..+.+.+ .. ..  .|..+.+ +.+.+   ...++|+|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~~~d~vv   78 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEIL---HDHAIDTVI   78 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHH---hcCCCCEEE
Confidence            6999999999999999988888999998864321 11   1222222 11 22  2333322 22222   234699999


Q ss_pred             ECCChH------------------HHHHHHHHhccC--CEEEEEcCcccc
Q 018013          303 ESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       303 d~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                      ++++..                  .....++.++..  ++||.+++...+
T Consensus        79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~y  128 (338)
T PRK10675         79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVY  128 (338)
T ss_pred             ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhh
Confidence            987621                  112334444443  489988886544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.80  E-value=0.033  Score=52.73  Aligned_cols=36  Identities=19%  Similarity=0.267  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      ++++|||+||+|.+|..+++.+...|.+|++++++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~   40 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS   40 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence            568999999999999999999999999999988754

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.80  E-value=0.097  Score=44.39  Aligned_cols=91  Identities=21%  Similarity=0.169  Sum_probs=59.4

Q ss_pred             hHHHHHHHHHHhCC-CCCCEEEEEcCCch-HHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHH
Q 018013          214 SGLTASIALEQAGP-ASGKKVLVTAAAGG-TGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFK  291 (362)
Q Consensus       214 ~~~tA~~al~~~~~-~~g~~VlI~ga~g~-vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~  291 (362)
                      ....+...++.... -.|++|+|.|+ |. +|..++..++..|++|+++.++.++                   +.+.+ 
T Consensus        27 ~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~~-------------------l~~~l-   85 (168)
T cd01080          27 TPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTKN-------------------LKEHT-   85 (168)
T ss_pred             hHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCchh-------------------HHHHH-
Confidence            33444455555554 78999999995 65 5998999999999998888876321                   12222 


Q ss_pred             HHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          292 EEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       292 ~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                          ..+|+||.+++...+ ..-+.++++-.++.++.+.
T Consensus        86 ----~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          86 ----KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             ----hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence                237888888775321 2223456666777777765

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=95.79  E-value=0.065  Score=49.18  Aligned_cols=32  Identities=34%  Similarity=0.433  Sum_probs=29.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      +|||+||+|.+|..+++.+...|.+|++++++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            48999999999999999999899999999874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.78  E-value=0.036  Score=51.03  Aligned_cols=98  Identities=17%  Similarity=0.143  Sum_probs=63.7

Q ss_pred             HHHHHHhC--C-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH-cCCcE----EEeCCCccHHHH
Q 018013          219 SIALEQAG--P-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE-LGVDR----VINYKAEDIKTV  289 (362)
Q Consensus       219 ~~al~~~~--~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~-~g~~~----v~~~~~~~~~~~  289 (362)
                      +.+|.+..  . .++++++|.| +||.+.+++..+...|+ +++++.|+.+|.+.+.+ ++...    .....+      
T Consensus       112 ~~~L~~~~~~~~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~------  184 (283)
T COG0169         112 LRALKEFGLPVDVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD------  184 (283)
T ss_pred             HHHHHhcCCCcccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc------
Confidence            34455533  2 5689999999 79999999999999996 89999999999887754 32111    111111      


Q ss_pred             HHHHCCC-ceeEEEECCChH--------HHHHHHHHhccCCEEEEEcC
Q 018013          290 FKEEFPK-GFDIIYESVGGD--------MFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       290 ~~~~~~~-g~Dvvid~~g~~--------~~~~~~~~l~~~G~~v~~G~  328 (362)
                         .... .+|+++|++.-.        .+.  ..++++.-.+.++-.
T Consensus       185 ---~~~~~~~dliINaTp~Gm~~~~~~~~~~--~~~l~~~~~v~D~vY  227 (283)
T COG0169         185 ---LEGLEEADLLINATPVGMAGPEGDSPVP--AELLPKGAIVYDVVY  227 (283)
T ss_pred             ---cccccccCEEEECCCCCCCCCCCCCCCc--HHhcCcCCEEEEecc
Confidence               0111 489999997621        111  456666666666543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.76  E-value=0.054  Score=50.76  Aligned_cols=98  Identities=23%  Similarity=0.331  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCC--c-EEE--eCCCc-cHHHHHHHHCCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGV--D-RVI--NYKAE-DIKTVFKEEFPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~--~-~v~--~~~~~-~~~~~~~~~~~~g~  298 (362)
                      .|++|||+||+|.+|..++..+...|.+|+++.++..+.+.+..    .+.  . .++  |..+. .+.+.+     .++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~~   78 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI-----EGC   78 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH-----hCC
Confidence            47899999999999999999888889999988887654333221    111  1 222  22222 222222     258


Q ss_pred             eEEEECCCh------H----HHH-------HHHHHhcc--C-CEEEEEcCccc
Q 018013          299 DIIYESVGG------D----MFN-------LCLKALAV--Y-GRLIVIGMISQ  331 (362)
Q Consensus       299 Dvvid~~g~------~----~~~-------~~~~~l~~--~-G~~v~~G~~~~  331 (362)
                      |+||++++.      +    .++       .+++.++.  + ++||.+++...
T Consensus        79 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~  131 (322)
T PLN02986         79 DAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAA  131 (322)
T ss_pred             CEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhh
Confidence            999999862      1    111       22333333  2 58999988753

>PLN02476 O-methyltransferase

Probab=95.75  E-value=0.11  Score=47.71  Aligned_cols=102  Identities=18%  Similarity=0.209  Sum_probs=69.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHHH----CCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKEE----FPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~~----~~~g  297 (362)
                      .+.++||=.|  +++|..++.+|+.++  .+|+.+..+++..+.++    +.|..+-+.....+..+.+...    ..+.
T Consensus       117 ~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~  194 (278)
T PLN02476        117 LGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS  194 (278)
T ss_pred             cCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence            6688999998  467888888888764  47999999988777664    4676533333223333443332    1246


Q ss_pred             eeEEEECCCh----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          298 FDIIYESVGG----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       298 ~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|.||--...    +.++.++++|++||.+|.=.....
T Consensus       195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DNvL~~  232 (278)
T PLN02476        195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWH  232 (278)
T ss_pred             CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEecCccC
Confidence            9988776653    578899999999999887655543

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.75  E-value=0.069  Score=46.86  Aligned_cols=97  Identities=21%  Similarity=0.166  Sum_probs=63.9

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHH----HcCCc---EEEeCCCccHHHHHHHH
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLK----ELGVD---RVINYKAEDIKTVFKEE  293 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~----~~g~~---~v~~~~~~~~~~~~~~~  293 (362)
                      ..+..+++++||=.|  .|.|..++.+++..+  .+|++++.+++-.+.++    ..+..   .++..+..+   ...  
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~---~~~--  138 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKR---GLE--  138 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCccc---CCc--
Confidence            333448889999998  355777778887764  59999999988666554    34542   223322111   110  


Q ss_pred             CCCceeEEEECCC-hHHHHHHHHHhccCCEEEEE
Q 018013          294 FPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       294 ~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~  326 (362)
                      ....+|+|+-+.. ....+..++.|++||+++..
T Consensus       139 ~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            1246999887655 45556788999999999764

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.74  E-value=0.19  Score=46.32  Aligned_cols=93  Identities=18%  Similarity=0.196  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCc-EEEeCCCccHHHHHHHHCCCceeEEEECCC-
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESVG-  306 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g-  306 (362)
                      ..+|.|+| .|-+|.-++.+|.-+|++|.+.+.+.+|+.++.. ++-. +..-+....+.+.+     .+.|++|..+= 
T Consensus       168 ~~kv~iiG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v-----~~aDlvIgaVLI  241 (371)
T COG0686         168 PAKVVVLG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV-----KKADLVIGAVLI  241 (371)
T ss_pred             CccEEEEC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh-----hhccEEEEEEEe
Confidence            35577777 5899999999999999999999999999999986 4443 33333334444443     34789888642 


Q ss_pred             -h-----HHHHHHHHHhccCCEEEEEcC
Q 018013          307 -G-----DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       307 -~-----~~~~~~~~~l~~~G~~v~~G~  328 (362)
                       +     -..++.++.|++|+.+|++..
T Consensus       242 pgakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         242 PGAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             cCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence             2     256788999999999998865

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=95.72  E-value=0.099  Score=47.90  Aligned_cols=109  Identities=22%  Similarity=0.277  Sum_probs=73.1

Q ss_pred             HHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHH
Q 018013          218 ASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKE  292 (362)
Q Consensus       218 A~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~  292 (362)
                      ++..+..... ++|++||=+| + |-|.+++.+|+..|++|++++-|++..+.+++    .|...-+...-.++.+.   
T Consensus        60 k~~~~~~kl~L~~G~~lLDiG-C-GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~---  134 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIG-C-GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDF---  134 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeC-C-ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccccc---
Confidence            3344434444 9999999999 4 55888999999999999999999998877753    56541111111111111   


Q ss_pred             HCCCceeEEEE-----CCCh----HHHHHHHHHhccCCEEEEEcCccccc
Q 018013          293 EFPKGFDIIYE-----SVGG----DMFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       293 ~~~~g~Dvvid-----~~g~----~~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                        .+.+|-|+.     .+|.    +.+..+.++|+++|+++.-......+
T Consensus       135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~~  182 (283)
T COG2230         135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPDQ  182 (283)
T ss_pred             --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCCc
Confidence              122676643     4553    57889999999999998876665543

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=95.72  E-value=0.061  Score=50.01  Aligned_cols=100  Identities=15%  Similarity=0.067  Sum_probs=58.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEE-eCCCccHHHHHHHHCCCceeEEEECCChH--
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVI-NYKAEDIKTVFKEEFPKGFDIIYESVGGD--  308 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~-~~~~~~~~~~~~~~~~~g~Dvvid~~g~~--  308 (362)
                      |||+||+|.+|..+++.+...|. .|+++.+..... .+.+++...+. +.++.+..+.+....-.++|+|+++++..  
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~   79 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT   79 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence            68999999999999999999998 788876543322 22222222222 22223333332221125799999998620  


Q ss_pred             -------H-------HHHHHHHh-ccCCEEEEEcCccccc
Q 018013          309 -------M-------FNLCLKAL-AVYGRLIVIGMISQYQ  333 (362)
Q Consensus       309 -------~-------~~~~~~~l-~~~G~~v~~G~~~~~~  333 (362)
                             .       ...+++.+ +.+.+||.+++...|.
T Consensus        80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~  119 (314)
T TIGR02197        80 TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYG  119 (314)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcC
Confidence                   1       11233333 3356899888865543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=95.70  E-value=0.096  Score=48.55  Aligned_cols=72  Identities=18%  Similarity=0.147  Sum_probs=43.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCH--hHHHHHHHcCC---cEEE--eCCCc-cHHHHHHHHCCCceeEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGE--HKAQLLKELGV---DRVI--NYKAE-DIKTVFKEEFPKGFDII  301 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~--~~~~~l~~~g~---~~v~--~~~~~-~~~~~~~~~~~~g~Dvv  301 (362)
                      +|+|+||+|.+|..+++.+...|  .+|++.++..  .+.+.+..+..   ..++  |..+. ++.+.++   +.++|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFT---EHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHh---hcCCCEE
Confidence            58999999999999999887766  6888876521  12222222211   1222  33332 2223322   2358999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      |++++
T Consensus        78 i~~a~   82 (317)
T TIGR01181        78 VHFAA   82 (317)
T ss_pred             EEccc
Confidence            99987

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02686 cinnamoyl-CoA reductase

Probab=95.70  E-value=0.082  Score=50.77  Aligned_cols=45  Identities=22%  Similarity=0.174  Sum_probs=37.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE  272 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~  272 (362)
                      ..+++|||+||+|.+|..++..+...|++|+++.++.++.+.+++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~   95 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLRE   95 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            568899999999999999999999999999988887665554443

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.68  E-value=0.066  Score=49.67  Aligned_cols=144  Identities=24%  Similarity=0.311  Sum_probs=79.5

Q ss_pred             CCCCCeEEEecCCCeeeEEEeeCCCeeeCCCC--C---HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHH
Q 018013          173 VKVGTPAAIMTFGSYAEFTMVPSKHILPVARP--D---PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAV  247 (362)
Q Consensus       173 ~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~--~---~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~ai  247 (362)
                      +++|++.++.+  .|.++-.-+.+.++.+...  +   ....+-     .....|.+. .++|++||=.|  .|.|..++
T Consensus       108 ~~vg~~~~I~P--~w~~~~~~~~~~~I~idPg~AFGTG~H~TT~-----lcl~~l~~~-~~~g~~vLDvG--~GSGILai  177 (295)
T PF06325_consen  108 IRVGDRLVIVP--SWEEYPEPPDEIVIEIDPGMAFGTGHHPTTR-----LCLELLEKY-VKPGKRVLDVG--CGSGILAI  177 (295)
T ss_dssp             EEECTTEEEEE--TT----SSTTSEEEEESTTSSS-SSHCHHHH-----HHHHHHHHH-SSTTSEEEEES---TTSHHHH
T ss_pred             EEECCcEEEEC--CCcccCCCCCcEEEEECCCCcccCCCCHHHH-----HHHHHHHHh-ccCCCEEEEeC--CcHHHHHH
Confidence            56788776665  4555522233444555431  1   112111     112233333 36888999888  34455555


Q ss_pred             HHHHHCCC-EEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCceeEEEECCChH----HHHHHHHHh
Q 018013          248 QLAKLAGN-TVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESVGGD----MFNLCLKAL  317 (362)
Q Consensus       248 qla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~----~~~~~~~~l  317 (362)
                      ..++ +|+ +|++++-++.-.+.+++    .|.. .+.-....+       .....+|+|+-+.-.+    ......+++
T Consensus       178 aA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~-------~~~~~~dlvvANI~~~vL~~l~~~~~~~l  249 (295)
T PF06325_consen  178 AAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED-------LVEGKFDLVVANILADVLLELAPDIASLL  249 (295)
T ss_dssp             HHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC-------TCCS-EEEEEEES-HHHHHHHHHHCHHHE
T ss_pred             HHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc-------cccccCCEEEECCCHHHHHHHHHHHHHhh
Confidence            5555 488 89999998776665543    3332 221111111       1126799999887754    445566789


Q ss_pred             ccCCEEEEEcCcccccC
Q 018013          318 AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       318 ~~~G~~v~~G~~~~~~~  334 (362)
                      +++|.++.-|.......
T Consensus       250 ~~~G~lIlSGIl~~~~~  266 (295)
T PF06325_consen  250 KPGGYLILSGILEEQED  266 (295)
T ss_dssp             EEEEEEEEEEEEGGGHH
T ss_pred             CCCCEEEEccccHHHHH
Confidence            99999999999887443

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.64  E-value=0.076  Score=45.63  Aligned_cols=78  Identities=21%  Similarity=0.236  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHH-HHHcCC--cEE---EeCCC-ccHHHHHHHH--CCCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQL-LKELGV--DRV---INYKA-EDIKTVFKEE--FPKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~-l~~~g~--~~v---~~~~~-~~~~~~~~~~--~~~g~D  299 (362)
                      ..+..+|+|+++|+|.+..|.....|++|.+.+.+.+..+. ++.++.  +|.   .|..+ .+....+++.  .-+.++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            35678999999999999999999999999999987664443 355665  332   22222 2333223222  113799


Q ss_pred             EEEECCC
Q 018013          300 IIYESVG  306 (362)
Q Consensus       300 vvid~~g  306 (362)
                      +++||.|
T Consensus        93 vlVncAG   99 (256)
T KOG1200|consen   93 VLVNCAG   99 (256)
T ss_pred             EEEEcCc
Confidence            9999999

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.62  E-value=0.13  Score=46.24  Aligned_cols=100  Identities=19%  Similarity=0.161  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHC----CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEF----PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~----~~g  297 (362)
                      .++++||=.|  .++|..++.+++..+  .+|+.++.+++..+.+++    .|.+.-+.....+..+.+....    .+.
T Consensus        67 ~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~~~~~  144 (234)
T PLN02781         67 MNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNNDPKPE  144 (234)
T ss_pred             hCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCCCCCC
Confidence            6678999988  466777777777653  599999999887776653    5654222222233334333321    346


Q ss_pred             eeEEEECCC----hHHHHHHHHHhccCCEEEEEcCc
Q 018013          298 FDIIYESVG----GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       298 ~Dvvid~~g----~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +|+||-...    .+.+..+++++++||.++.-...
T Consensus       145 fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn~l  180 (234)
T PLN02781        145 FDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDNTL  180 (234)
T ss_pred             CCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence            999986654    25788899999999998864443

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.61  E-value=0.33  Score=42.87  Aligned_cols=99  Identities=18%  Similarity=0.179  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcEEE--------------eCCCccHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDRVI--------------NYKAEDIKTVFKE  292 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~v~--------------~~~~~~~~~~~~~  292 (362)
                      .++.+||+.|  -|.|.-++-+|. .|.+|++++.++.-.+.+ ++.+.....              +..-.++.+. ..
T Consensus        33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~  108 (213)
T TIGR03840        33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFAL-TA  108 (213)
T ss_pred             CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCC-Cc
Confidence            4677999998  355777777775 699999999999877775 333332100              0000111000 00


Q ss_pred             HCCCceeEEEECCC---------hHHHHHHHHHhccCCEEEEEcCcc
Q 018013          293 EFPKGFDIIYESVG---------GDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       293 ~~~~g~Dvvid~~g---------~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .....+|.|+|+..         ...++.+.++|+++|+++.++...
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~~  155 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLDY  155 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEEc
Confidence            01235899999754         236788999999999877776643

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=95.61  E-value=0.096  Score=50.36  Aligned_cols=99  Identities=15%  Similarity=0.212  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH--cCCcEE-EeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE--LGVDRV-INYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~--~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      ..+++|||+|++|-+|..++..+...|.+|+++++....  .+..  ++...+ .|..  +........  .++|+||++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~--~~~~~~~~~~~~~~Dl~--d~~~~~~~~--~~~D~Vih~   92 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNE--HMSEDMFCHEFHLVDLR--VMENCLKVT--KGVDHVFNL   92 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccc--ccccccccceEEECCCC--CHHHHHHHH--hCCCEEEEc
Confidence            467899999999999999999999999999999875321  1111  122211 1222  222211111  358999999


Q ss_pred             CChH-------------------HHHHHHHHhccC--CEEEEEcCcccc
Q 018013          305 VGGD-------------------MFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       305 ~g~~-------------------~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                      ++..                   ....+++.++..  .+||.+++...|
T Consensus        93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vY  141 (370)
T PLN02695         93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIY  141 (370)
T ss_pred             ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhc
Confidence            7420                   112344544444  389988776544

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.60  E-value=0.13  Score=43.29  Aligned_cols=44  Identities=25%  Similarity=0.217  Sum_probs=37.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV  275 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~  275 (362)
                      .+|.++| .|.+|...++-+...|.+|++.++++++.+.+.+.|+
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~   45 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGA   45 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTE
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhh
Confidence            4788999 7999999999988999999999999999998887764

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.60  E-value=0.11  Score=46.18  Aligned_cols=94  Identities=21%  Similarity=0.332  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EEEeCCCccHHHHHHHHCCCceeEEEEC-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RVINYKAEDIKTVFKEEFPKGFDIIYES-  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid~-  304 (362)
                      -+|.+||=.|..|  |+.+.-+|+ .|++|++++-+++-.+.++.....  .-++|......+...  .++.+|+|+.. 
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~--~~~~FDvV~cmE  132 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLAS--AGGQFDVVTCME  132 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHh--cCCCccEEEEhh
Confidence            4889999998433  455555555 589999999999988888643221  125566555444432  23679999864 


Q ss_pred             ----CC--hHHHHHHHHHhccCCEEEEE
Q 018013          305 ----VG--GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       305 ----~g--~~~~~~~~~~l~~~G~~v~~  326 (362)
                          +.  ...+..+.++++|+|.++.-
T Consensus       133 VlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         133 VLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             HHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence                33  35788999999999988754

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.57  E-value=0.13  Score=46.00  Aligned_cols=97  Identities=31%  Similarity=0.362  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH----cCCcE--EEeCCCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE----LGVDR--VINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~~--v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      ++|++||=.+  +|+|..+..+++..|. +|++++.+++-++..++    .|...  .+..+.+.+.     ..+..+|+
T Consensus        50 ~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LP-----f~D~sFD~  122 (238)
T COG2226          50 KPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLP-----FPDNSFDA  122 (238)
T ss_pred             CCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCC-----CCCCccCE
Confidence            6899998876  6889999999999884 99999999998887764    22221  1111111110     22456899


Q ss_pred             EEECCCh-------HHHHHHHHHhccCCEEEEEcCccc
Q 018013          301 IYESVGG-------DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       301 vid~~g~-------~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      |.-+.|-       ..+.++.+.|+|+|+++.+.....
T Consensus       123 vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p  160 (238)
T COG2226         123 VTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP  160 (238)
T ss_pred             EEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence            9888772       578899999999999998877554

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.55  E-value=0.048  Score=47.54  Aligned_cols=95  Identities=18%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      .++.+||-.|  .|.|..+..+++. |++|++++.+++-.+.+++    .+...+ .....++.+.   .....+|+|+.
T Consensus        29 ~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~---~~~~~fD~I~~  101 (197)
T PRK11207         29 VKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNL---TFDGEYDFILS  101 (197)
T ss_pred             CCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhC---CcCCCcCEEEE
Confidence            5668899998  3447777778775 8899999999886666543    233211 1111122111   12345999987


Q ss_pred             CCC---------hHHHHHHHHHhccCCEEEEEcCc
Q 018013          304 SVG---------GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       304 ~~g---------~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +..         ...++.+.+.|+++|.++.+..+
T Consensus       102 ~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~~  136 (197)
T PRK11207        102 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM  136 (197)
T ss_pred             ecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence            643         14577888899999996655443

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.54  E-value=0.14  Score=45.83  Aligned_cols=105  Identities=20%  Similarity=0.283  Sum_probs=73.4

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHHHC
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      .+...+..+|++|+=.|  .|.|.+++-||+..|-  +|+.....++..+.++    ++|....+.....|+.+.   ..
T Consensus        86 I~~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~---~~  160 (256)
T COG2519          86 IVARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREG---ID  160 (256)
T ss_pred             HHHHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecccccc---cc
Confidence            34455569999988776  4568888899988774  8999999888777764    356543233333333332   22


Q ss_pred             CCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +..+|.+|--...  +.++.+.+.|+++|+++.+-...
T Consensus       161 ~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~v  198 (256)
T COG2519         161 EEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPTV  198 (256)
T ss_pred             ccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCCH
Confidence            3468888766654  78999999999999999885543

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.51  E-value=0.2  Score=41.79  Aligned_cols=103  Identities=18%  Similarity=0.235  Sum_probs=69.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHH----H----HHHCCCceeEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV----F----KEEFPKGFDII  301 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~----~----~~~~~~g~Dvv  301 (362)
                      ..+|+|.|+-|.+|.++++..|..++-|.-++-++....     .. .++...+.++.++    +    ..+.+..+|.|
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----d~-sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav   76 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----DS-SILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV   76 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----cc-eEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence            357999999999999999999999998888876654321     12 2333333333222    1    22346789999


Q ss_pred             EECCCh---------HHH------------------HHHHHHhccCCEEEEEcCcccccCCCCC
Q 018013          302 YESVGG---------DMF------------------NLCLKALAVYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       302 id~~g~---------~~~------------------~~~~~~l~~~G~~v~~G~~~~~~~~~~~  338 (362)
                      |...|+         +.+                  ..+-.+|+++|-+-+.|....-.+.+..
T Consensus        77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM  140 (236)
T KOG4022|consen   77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM  140 (236)
T ss_pred             EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcc
Confidence            988763         111                  1234578999999999987766665443

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=95.48  E-value=0.16  Score=45.86  Aligned_cols=101  Identities=15%  Similarity=0.129  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHHHC-----CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKEEF-----PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~~~-----~~  296 (362)
                      .+.++||=.|  ..+|..++.+|+.+  +.+|+.+..+++..+.++    +.|...-+.....+..+.+..+.     .+
T Consensus        78 ~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~~~~~~  155 (247)
T PLN02589         78 INAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDGKYHG  155 (247)
T ss_pred             hCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhccccCC
Confidence            4567899998  57888888888876  469999999988776664    45654333333334444444432     24


Q ss_pred             ceeEEEECCCh----HHHHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGG----DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .+|+||--...    ..++.++++|++||.||.=....
T Consensus       156 ~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~DNvl~  193 (247)
T PLN02589        156 TFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLW  193 (247)
T ss_pred             cccEEEecCCHHHhHHHHHHHHHhcCCCeEEEEcCCCC
Confidence            79988866553    57888999999999988654443

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=95.48  E-value=0.17  Score=46.98  Aligned_cols=72  Identities=24%  Similarity=0.257  Sum_probs=44.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHHHHHc----CCcE-EEeCCCc-cHHHHHHHHCCCceeEEEEC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQLLKEL----GVDR-VINYKAE-DIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~l~~~----g~~~-v~~~~~~-~~~~~~~~~~~~g~Dvvid~  304 (362)
                      +|||+||+|.+|..+++.+...|.+|+++++...+ .+.+...    ++.. ..|..+. .+.+.+.   ..++|+|+++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~~~d~vv~~   77 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFE---EHKIDAVIHF   77 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHH---hCCCcEEEEC
Confidence            48999999999999999998899999887643221 1222211    1111 1233322 2222222   2469999999


Q ss_pred             CC
Q 018013          305 VG  306 (362)
Q Consensus       305 ~g  306 (362)
                      +|
T Consensus        78 ag   79 (328)
T TIGR01179        78 AG   79 (328)
T ss_pred             cc
Confidence            87

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=95.44  E-value=0.063  Score=48.20  Aligned_cols=103  Identities=20%  Similarity=0.248  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH--HHHHHHcCC-----c-EE--EeCCC--ccHHHHHHHHC--
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK--AQLLKELGV-----D-RV--INYKA--EDIKTVFKEEF--  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~--~~~l~~~g~-----~-~v--~~~~~--~~~~~~~~~~~--  294 (362)
                      .+++++|+|+++|+|.+++..+...|++|+++.++.++  .+.+.+...     . ..  .|..+  +.+...+....  
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999988888999998888876543  333322111     1 11  34432  22222222221  


Q ss_pred             CCceeEEEECCCh-----H----------------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          295 PKGFDIIYESVGG-----D----------------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       295 ~~g~Dvvid~~g~-----~----------------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      -+++|++++++|.     .                      ..+.+.+.+... +||.+++....
T Consensus        84 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~  147 (251)
T COG1028          84 FGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL  147 (251)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc
Confidence            2459999999883     1                      011233334444 99999988876

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.44  E-value=0.22  Score=47.03  Aligned_cols=98  Identities=11%  Similarity=0.087  Sum_probs=66.4

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHH-HHCCC-EEEEecCCHhHHHHHHH-----cCCcEEEeCCCccHHHHHHHHCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLA-KLAGN-TVVATCGGEHKAQLLKE-----LGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla-~~~G~-~Vi~~~~~~~~~~~l~~-----~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      ..+.++..++++|+| +|+.+...+..+ ...++ +|.+..+++++.+.+.+     ++.... .+  .+..+.+     
T Consensus       120 ~~la~~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~~-----  190 (325)
T PRK08618        120 KYLAREDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV--NSADEAI-----  190 (325)
T ss_pred             HHhcCCCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee--CCHHHHH-----
Confidence            445556678999999 899998776544 45676 89999999888766532     344322 12  2333333     


Q ss_pred             CceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          296 KGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       296 ~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ...|+|+.|++...--.. +.+++|-.++.+|...
T Consensus       191 ~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        191 EEADIIVTVTNAKTPVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             hcCCEEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence            358999999986322223 7889988998998754

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.43  E-value=0.12  Score=47.69  Aligned_cols=85  Identities=18%  Similarity=0.160  Sum_probs=58.0

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCcee
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      .|+.... -.|++|+|.|.++-+|..++.++...|++|+++-+...                   ++.+.+     +++|
T Consensus       149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~-------------------~L~~~~-----~~aD  204 (283)
T PRK14192        149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ-------------------NLPELV-----KQAD  204 (283)
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch-------------------hHHHHh-----ccCC
Confidence            3444444 78999999995444999999999999998887765211                   111111     3589


Q ss_pred             EEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          300 IIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       300 vvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +|++++|...+ .-.+.++++-.++.+|...
T Consensus       205 IvI~AtG~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        205 IIVGAVGKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             EEEEccCCCCc-CCHHHcCCCCEEEEEEEee
Confidence            99999985321 2235588888888888754

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=95.40  E-value=0.09  Score=49.08  Aligned_cols=98  Identities=22%  Similarity=0.320  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH---HHHHHHcC-Cc---EEEeCC--C-ccHHHHHHHHCCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK---AQLLKELG-VD---RVINYK--A-EDIKTVFKEEFPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~---~~~l~~~g-~~---~v~~~~--~-~~~~~~~~~~~~~g~  298 (362)
                      .+..|+|+||+|=+|...+..+...|.+|.+|+|++++   .++++++. +.   .++..+  + ..+.+.+     .|+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai-----~gc   79 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI-----DGC   79 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH-----hCC
Confidence            57899999999999999999999999999999998775   33566654 22   233222  2 2333332     469


Q ss_pred             eEEEECCCh----------HH-------HHHHHHHhccCC---EEEEEcCccc
Q 018013          299 DIIYESVGG----------DM-------FNLCLKALAVYG---RLIVIGMISQ  331 (362)
Q Consensus       299 Dvvid~~g~----------~~-------~~~~~~~l~~~G---~~v~~G~~~~  331 (362)
                      |.||.++..          +.       ....++.++...   |+|...+...
T Consensus        80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aA  132 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAA  132 (327)
T ss_pred             CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHH
Confidence            999988763          11       123444444443   7887766554

>PRK14967 putative methyltransferase; Provisional

Probab=95.40  E-value=0.3  Score=43.34  Aligned_cols=93  Identities=25%  Similarity=0.315  Sum_probs=61.7

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCce
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      ...+++++||-.| +|. |..++.+++. ++ +|++++.+++..+.+++    .+.. .++.   .++.+.   .....+
T Consensus        32 ~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~---~d~~~~---~~~~~f  102 (223)
T PRK14967         32 EGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR---GDWARA---VEFRPF  102 (223)
T ss_pred             cccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---Cchhhh---ccCCCe
Confidence            3347789999998 444 8888888875 66 99999999887776543    4443 2222   222221   123579


Q ss_pred             eEEEECCC----------------------------hHHHHHHHHHhccCCEEEEE
Q 018013          299 DIIYESVG----------------------------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       299 Dvvid~~g----------------------------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      |+|+.+..                            ...++.+.+.|+++|+++.+
T Consensus       103 D~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967        103 DVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             eEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            99997631                            01456778999999999976

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.38  E-value=0.22  Score=46.05  Aligned_cols=92  Identities=20%  Similarity=0.086  Sum_probs=58.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcC----CcEEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELG----VDRVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g----~~~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      ..+++|+|.| +||+|.+++..+...|+ +|+++.++.+|.+.+. +++    ...+...  +++.+.     -..+|+|
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~-----~~~aDiV  196 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAA-----LAAADGL  196 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhh-----hCCCCEE
Confidence            5678999999 79999999999999998 8999999988887764 332    1122221  111111     1358999


Q ss_pred             EECCCh-----HHHHHHHHHhccCCEEEEEc
Q 018013          302 YESVGG-----DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       302 id~~g~-----~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +||+..     +........+++...++++-
T Consensus       197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~Div  227 (284)
T PRK12549        197 VHATPTGMAKHPGLPLPAELLRPGLWVADIV  227 (284)
T ss_pred             EECCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence            999541     11111224466665555553

>PLN03139 formate dehydrogenase; Provisional

Probab=95.36  E-value=0.12  Score=49.84  Aligned_cols=91  Identities=19%  Similarity=0.151  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|.| .|.+|+.+++.++.+|++|++.+++....+..++.|+..+     .++.+.+.     ..|+|+.++.. 
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~-----~sDvV~l~lPlt  266 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLP-----KCDVVVINTPLT  266 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CCHHHHHh-----hCCEEEEeCCCC
Confidence            578999999 8999999999999999999999886543444444554211     23444432     36888887762 


Q ss_pred             -H---HH-HHHHHHhccCCEEEEEcCcc
Q 018013          308 -D---MF-NLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -~---~~-~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +   .+ ...+..|+++..||.++.-.
T Consensus       267 ~~T~~li~~~~l~~mk~ga~lIN~aRG~  294 (386)
T PLN03139        267 EKTRGMFNKERIAKMKKGVLIVNNARGA  294 (386)
T ss_pred             HHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence             1   12 35677888888888877644

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.34  E-value=0.16  Score=46.74  Aligned_cols=89  Identities=20%  Similarity=0.218  Sum_probs=64.7

Q ss_pred             HHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ...+..|..... -.|++|+|.|.+.-+|.-++.++...|++|+++.+..                   .++.+.+    
T Consensus       143 ~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------------~~l~~~~----  199 (286)
T PRK14175        143 LGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------------KDMASYL----  199 (286)
T ss_pred             HHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------hhHHHHH----
Confidence            334445555554 7899999999766699999999999999999887632                   1222222    


Q ss_pred             CCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +..|+||.++|.. .+..  +.++++-.+|.+|...
T Consensus       200 -~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        200 -KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             -hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence             3479999999964 4444  4588888999999865

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.34  E-value=0.064  Score=50.12  Aligned_cols=38  Identities=37%  Similarity=0.380  Sum_probs=33.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK  266 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~  266 (362)
                      .+++|||+||+|.+|..++..+...|.+|++++++..+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            36899999999999999999999999999998876543

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.33  E-value=0.14  Score=38.77  Aligned_cols=85  Identities=22%  Similarity=0.233  Sum_probs=57.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC---CEEEEe-cCCHhHHHHHH-HcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG---NTVVAT-CGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G---~~Vi~~-~~~~~~~~~l~-~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|.|+| +|.+|.+++.-....|   .+|+.+ .+++++.+.+. ++++..+.    .+..+.++     ..|+||-|+-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA----DDNEEAAQ-----EADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES----EEHHHHHH-----HTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc----CChHHhhc-----cCCEEEEEEC
Confidence            577887 8999999999999999   799955 99999988875 56643332    12333333     3799999999


Q ss_pred             hHHHHHHHHH---hccCCEEEEE
Q 018013          307 GDMFNLCLKA---LAVYGRLIVI  326 (362)
Q Consensus       307 ~~~~~~~~~~---l~~~G~~v~~  326 (362)
                      ...+...++.   ..++..+|.+
T Consensus        71 p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   71 PQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHHHHHhhccCCCEEEEe
Confidence            7665555544   4455666654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.32  E-value=0.15  Score=45.08  Aligned_cols=95  Identities=26%  Similarity=0.276  Sum_probs=62.3

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHH----HcCCcE--EEeCCCccHHHHHHHHCCC
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLK----ELGVDR--VINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~----~~g~~~--v~~~~~~~~~~~~~~~~~~  296 (362)
                      +..+++++||=.|  .|.|..++.+++..+.  +|++++.+++-.+.++    ++|.+.  ++..+..+   ..  ....
T Consensus        73 l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~---~~--~~~~  145 (215)
T TIGR00080        73 LELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQ---GW--EPLA  145 (215)
T ss_pred             hCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCccc---CC--cccC
Confidence            3448899999998  4567777788887653  6999999888776664    355532  22211111   10  1124


Q ss_pred             ceeEEEECCC-hHHHHHHHHHhccCCEEEEE
Q 018013          297 GFDIIYESVG-GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       297 g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~  326 (362)
                      .+|+|+-+.. ....+...+.|+++|+++..
T Consensus       146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             CCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            6998875543 45566788999999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.31  E-value=0.052  Score=47.63  Aligned_cols=103  Identities=20%  Similarity=0.237  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHH----HcCCc---EEEeCCCccHHHHHHHHC-CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLK----ELGVD---RVINYKAEDIKTVFKEEF-PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~----~~g~~---~v~~~~~~~~~~~~~~~~-~~g  297 (362)
                      ...++||-+|  +++|..++.+|+.+  +.+|+.+..+++..+.++    +.|..   .++.....++...+.... .+.
T Consensus        44 ~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~~  121 (205)
T PF01596_consen   44 TRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEGQ  121 (205)
T ss_dssp             HT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTTS
T ss_pred             cCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCCc
Confidence            4567899998  67789999999876  479999999998877774    45653   233332222222222111 246


Q ss_pred             eeEEEECCC-h---HHHHHHHHHhccCCEEEEEcCcccc
Q 018013          298 FDIIYESVG-G---DMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       298 ~Dvvid~~g-~---~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      +|.||--.. .   ..+..++++|++||.+|.=......
T Consensus       122 fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~l~~G  160 (205)
T PF01596_consen  122 FDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNVLWRG  160 (205)
T ss_dssp             EEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETTTGGG
T ss_pred             eeEEEEcccccchhhHHHHHhhhccCCeEEEEccccccc
Confidence            998876554 2   5678899999999999987766543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=95.30  E-value=0.25  Score=46.91  Aligned_cols=73  Identities=16%  Similarity=0.053  Sum_probs=45.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH-cCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE-LGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~-~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .+|||+||+|-+|..+++.+... |.+|++++++..+...+.. .+...+ .|..+ +. +.+.... .++|+||++++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~-~~-~~~~~~~-~~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITI-NK-EWIEYHV-KKCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCC-CH-HHHHHHH-cCCCEEEECcc
Confidence            47999999999999999888765 6899999987654433322 122211 12221 11 1122221 35899999865

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.30  E-value=0.19  Score=46.48  Aligned_cols=43  Identities=23%  Similarity=0.186  Sum_probs=37.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK  271 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~  271 (362)
                      ..+++++|.| +||.+.+++..+...|+ +++++.++.+|.+.+.
T Consensus       125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            5578999999 69999998888888997 8999999998887774

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.29  E-value=0.26  Score=44.65  Aligned_cols=92  Identities=24%  Similarity=0.304  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      .++.+||=.|  .|.|..+..+++. |.+|++++.+++..+.+++    .|..   .++.   .++.+. .....+.+|+
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~~l-~~~~~~~fD~  115 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQDI-AQHLETPVDL  115 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHHHH-hhhcCCCCCE
Confidence            5567888887  4667788888875 8899999999988877754    3432   1222   222221 1122456999


Q ss_pred             EEECCC-------hHHHHHHHHHhccCCEEEEE
Q 018013          301 IYESVG-------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       301 vid~~g-------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      |+....       ...+..+.+.|+++|+++.+
T Consensus       116 V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        116 ILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             EEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            986533       14678899999999999765

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.28  E-value=0.16  Score=49.04  Aligned_cols=89  Identities=20%  Similarity=0.225  Sum_probs=57.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC-C-EEEEecCCHhHHHHHHH--cCCc---EEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAG-N-TVVATCGGEHKAQLLKE--LGVD---RVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G-~-~Vi~~~~~~~~~~~l~~--~g~~---~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      |+|.|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+  .+..   ..+|..+  ..+ +.+.. ++.|+|+||+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~-l~~~~-~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND--PES-LAELL-RGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT--HHH-HHHHH-TTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC--HHH-HHHHH-hcCCEEEECC
Confidence            789998 999999999888766 4 89999999999877753  2222   2344433  222 22221 3459999999


Q ss_pred             ChH-HHHHHHHHhccCCEEEEE
Q 018013          306 GGD-MFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       306 g~~-~~~~~~~~l~~~G~~v~~  326 (362)
                      |.. ....+-.|++.+-.+|..
T Consensus        76 gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   76 GPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             SGGGHHHHHHHHHHHT-EEEES
T ss_pred             ccchhHHHHHHHHHhCCCeecc
Confidence            974 444555677777788883

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02572 UDP-sulfoquinovose synthase

Probab=95.27  E-value=0.28  Score=48.36  Aligned_cols=34  Identities=24%  Similarity=0.178  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC  261 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~  261 (362)
                      .++++|||+||+|.+|..+++.+...|++|++++
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d   78 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVD   78 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEe
Confidence            4578999999999999999999998999999976

>PLN00198 anthocyanidin reductase; Provisional

Probab=95.25  E-value=0.11  Score=49.16  Aligned_cols=100  Identities=20%  Similarity=0.295  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH---HHc---CCcEEE--eCCCcc-HHHHHHHHCCCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL---KEL---GVDRVI--NYKAED-IKTVFKEEFPKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l---~~~---g~~~v~--~~~~~~-~~~~~~~~~~~g~  298 (362)
                      ..+++|||+||+|.+|..++..+...|++|++++++......+   ..+   +--.++  |..+.+ +.+.+     .++
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~   81 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPI-----AGC   81 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHH-----hcC
Confidence            3478999999999999999999998999998887765433221   111   111222  333322 22222     258


Q ss_pred             eEEEECCCh------H----H-------HHHHHHHhcc---CCEEEEEcCcccc
Q 018013          299 DIIYESVGG------D----M-------FNLCLKALAV---YGRLIVIGMISQY  332 (362)
Q Consensus       299 Dvvid~~g~------~----~-------~~~~~~~l~~---~G~~v~~G~~~~~  332 (362)
                      |+||++++.      +    .       ....++.+++   .++||.+++.+.+
T Consensus        82 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~  135 (338)
T PLN00198         82 DLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAV  135 (338)
T ss_pred             CEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceee
Confidence            999999862      1    1       1123444433   3599999887654

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.21  E-value=0.34  Score=43.24  Aligned_cols=98  Identities=20%  Similarity=0.281  Sum_probs=62.1

Q ss_pred             HHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCE---EEEecCC----HhH--------HHHHHHcCCcEEEeCC
Q 018013          219 SIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNT---VVATCGG----EHK--------AQLLKELGVDRVINYK  282 (362)
Q Consensus       219 ~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~---Vi~~~~~----~~~--------~~~l~~~g~~~v~~~~  282 (362)
                      ..+++.... -.+++++|.| +|+.|..++..+...|++   +++++++    .++        .++++.++... .   
T Consensus        13 ~~al~~~g~~l~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---   87 (226)
T cd05311          13 LNALKLVGKKIEEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---   87 (226)
T ss_pred             HHHHHHhCCCccCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---
Confidence            345555544 5678999999 699999999888888974   8898887    333        22334433211 1   


Q ss_pred             CccHHHHHHHHCCCceeEEEECCChHHH-HHHHHHhccCCEEEEE
Q 018013          283 AEDIKTVFKEEFPKGFDIIYESVGGDMF-NLCLKALAVYGRLIVI  326 (362)
Q Consensus       283 ~~~~~~~~~~~~~~g~Dvvid~~g~~~~-~~~~~~l~~~G~~v~~  326 (362)
                      +.++.+.+     .++|++|++++...+ ...++.|+++..+..+
T Consensus        88 ~~~l~~~l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~l  127 (226)
T cd05311          88 GGTLKEAL-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFAL  127 (226)
T ss_pred             cCCHHHHH-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEe
Confidence            12333333     248999999974322 4667777776655544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.20  E-value=0.064  Score=47.43  Aligned_cols=100  Identities=17%  Similarity=0.231  Sum_probs=65.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCc-EEEeCCCc-cHHHHHHHHCCCceeEEEECCChH-
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVD-RVINYKAE-DIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~-~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      |||+||+|-+|..++..+...|.+|+.+.++......... .... ...|..+. .+.+.+...   .+|.||++++.. 
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~~~   77 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAFSS   77 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecccc
Confidence            7999999999999999999999998888877665544432 3332 22344442 333343332   689999998731 


Q ss_pred             -----------------HHHHHHHHhcc-C-CEEEEEcCcccccCC
Q 018013          309 -----------------MFNLCLKALAV-Y-GRLIVIGMISQYQGE  335 (362)
Q Consensus       309 -----------------~~~~~~~~l~~-~-G~~v~~G~~~~~~~~  335 (362)
                                       .....++.++. + .+|+.+++...+...
T Consensus        78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~  123 (236)
T PF01370_consen   78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP  123 (236)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc
Confidence                             11233444443 3 499999997766554

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=95.16  E-value=0.21  Score=51.88  Aligned_cols=76  Identities=13%  Similarity=0.061  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHc-CCcEE-EeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKEL-GVDRV-INYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~-g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      +++++|||+||+|-+|..+++.+... |.+|+++++...+...+... +...+ -|..+.  ...++... .++|+||++
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~--~~~l~~~l-~~~D~ViHl  389 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIH--SEWIEYHI-KKCDVVLPL  389 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCc--HHHHHHHh-cCCCEEEEC
Confidence            67889999999999999999888765 68999999866543322111 22221 122221  11122211 369999998


Q ss_pred             CC
Q 018013          305 VG  306 (362)
Q Consensus       305 ~g  306 (362)
                      ++
T Consensus       390 Aa  391 (660)
T PRK08125        390 VA  391 (660)
T ss_pred             cc
Confidence            76

>PLN02427 UDP-apiose/xylose synthase

Probab=95.16  E-value=0.12  Score=49.96  Aligned_cols=76  Identities=13%  Similarity=0.016  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCC------cEEEeCCCccHHHHHHHHCCCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGV------DRVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~------~~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      +..+|||+||+|-+|..+++.+... |.+|++++++.++...+...+.      -.++..+-.+... +.... .++|+|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~-l~~~~-~~~d~V   90 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSR-LEGLI-KMADLT   90 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHH-HHHHh-hcCCEE
Confidence            4467999999999999999888877 5899999987666555543321      1122211112111 11111 258999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      |++++
T Consensus        91 iHlAa   95 (386)
T PLN02427         91 INLAA   95 (386)
T ss_pred             EEccc
Confidence            99986

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.13  E-value=0.32  Score=44.10  Aligned_cols=96  Identities=20%  Similarity=0.268  Sum_probs=66.8

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeE
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +......++++||=.|.  |.|..+..+++.. +++|++++.++.-.+.+++.+++.+.    .+..+.   .....+|+
T Consensus        22 l~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~----~d~~~~---~~~~~fD~   92 (255)
T PRK14103         22 LARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART----GDVRDW---KPKPDTDV   92 (255)
T ss_pred             HHhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE----cChhhC---CCCCCceE
Confidence            44444478899998883  3467777777765 67999999999888888776654332    122111   12346999


Q ss_pred             EEECCC-------hHHHHHHHHHhccCCEEEEE
Q 018013          301 IYESVG-------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       301 vid~~g-------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      |+-+..       ...+..+.+.|++||+++..
T Consensus        93 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         93 VVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             EEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            998654       24677889999999999864

>PRK08317 hypothetical protein; Provisional

Probab=95.13  E-value=0.33  Score=42.93  Aligned_cols=99  Identities=24%  Similarity=0.279  Sum_probs=65.8

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHHc----CCc-EEEeCCCccHHHHHHHHCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKEL----GVD-RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~~----g~~-~v~~~~~~~~~~~~~~~~~  295 (362)
                      .....+++++||-.| +| .|..+..+++..+  .++++++.++...+.+++.    +.. .+...+....     ....
T Consensus        13 ~~~~~~~~~~vLdiG-~G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----~~~~   85 (241)
T PRK08317         13 ELLAVQPGDRVLDVG-CG-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGL-----PFPD   85 (241)
T ss_pred             HHcCCCCCCEEEEeC-CC-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccC-----CCCC
Confidence            333348899999998 44 4888888888763  6999999998888877654    111 1121111110     0123


Q ss_pred             CceeEEEECCC-------hHHHHHHHHHhccCCEEEEEcC
Q 018013          296 KGFDIIYESVG-------GDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       296 ~g~Dvvid~~g-------~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ..+|+|+....       ...++.+.++|+++|.++....
T Consensus        86 ~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         86 GSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             CCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            56898886432       2578899999999999987753

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.10  E-value=0.18  Score=46.77  Aligned_cols=87  Identities=22%  Similarity=0.232  Sum_probs=63.7

Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ..+..|+.... -.|++|.|+|-++-+|.-++.++...|++|+++. ++.                    ++.+..    
T Consensus       144 ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------------------~l~e~~----  199 (296)
T PRK14188        144 GCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------------------DLPAVC----  199 (296)
T ss_pred             HHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC--------------------CHHHHH----
Confidence            33444555544 7899999999999999999999999999999884 432                    122222    


Q ss_pred             CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +..|+|+-++|. ..+...|  +++|..+|.+|...
T Consensus       200 -~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin~  233 (296)
T PRK14188        200 -RRADILVAAVGRPEMVKGDW--IKPGATVIDVGINR  233 (296)
T ss_pred             -hcCCEEEEecCChhhcchhe--ecCCCEEEEcCCcc
Confidence             247999999996 4444444  88999999999865

>PRK01581 speE spermidine synthase; Validated

Probab=95.10  E-value=0.25  Score=47.04  Aligned_cols=96  Identities=18%  Similarity=0.203  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcC--------C--cEEEeCCCccHHHHHHHHCCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELG--------V--DRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g--------~--~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ...++|||.|  ||.|.++..+++..+ .+|++++.+++-.+.++++.        .  +.-+...-.|..+.+.. ..+
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~  225 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS  225 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence            4557999999  456777777787655 48999999988888887521        0  00001111333444433 345


Q ss_pred             ceeEEEECCC------------hHHHHHHHHHhccCCEEEEE
Q 018013          297 GFDIIYESVG------------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       297 g~Dvvid~~g------------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      .+|+||--..            .+.++.+.+.|+++|.|+.-
T Consensus       226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Q  267 (374)
T PRK01581        226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQ  267 (374)
T ss_pred             CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            6999886542            13677899999999998875

>PRK07574 formate dehydrogenase; Provisional

Probab=95.08  E-value=0.16  Score=48.92  Aligned_cols=91  Identities=15%  Similarity=0.104  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|+.+++.++.+|++|++.+++....+..+++|+..     ..++.+.+     ...|+|+.++.. 
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~-----~~~l~ell-----~~aDvV~l~lPlt  259 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY-----HVSFDSLV-----SVCDVVTIHCPLH  259 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee-----cCCHHHHh-----hcCCEEEEcCCCC
Confidence            578999999 899999999999999999999998753333334444321     12233332     236888888762 


Q ss_pred             -H---HH-HHHHHHhccCCEEEEEcCcc
Q 018013          308 -D---MF-NLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -~---~~-~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +   .+ ...+..|+++..||.++.-.
T Consensus       260 ~~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        260 PETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             HHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence             1   22 35677788888888776543

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.06  E-value=0.24  Score=47.42  Aligned_cols=96  Identities=17%  Similarity=0.170  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEec--CCHhHH-HHHHHcCCcEEEeCCCccHH---HH-------------
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLA--GNTVVATC--GGEHKA-QLLKELGVDRVINYKAEDIK---TV-------------  289 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~--~~~~~~-~~l~~~g~~~v~~~~~~~~~---~~-------------  289 (362)
                      ++|.|.|++|++|..++...+..  .++|++.+  ++.++. +++++++...+.-.+.....   +.             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            57999999999999999988765  46888876  334343 33467888766544432111   11             


Q ss_pred             -HHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEE
Q 018013          290 -FKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       290 -~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~  326 (362)
                       +.+. ....+|+|+++.+| ..+...+.+++.|-++.+-
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA  121 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA  121 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence             1111 12358999999876 4566777777777666553

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.02  E-value=0.19  Score=46.65  Aligned_cols=42  Identities=24%  Similarity=0.287  Sum_probs=33.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCH---hHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGE---HKAQLL  270 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~---~~~~~l  270 (362)
                      -.+++++|+|+ ||+|.+++..+...|++ |+++.++.   ++.+.+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l  169 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQT  169 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHH
Confidence            46789999995 89999999888889994 99999985   454443

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.02  E-value=0.093  Score=48.49  Aligned_cols=74  Identities=19%  Similarity=0.127  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcCCc-EEEeCCC-ccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELGVD-RVINYKA-EDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g~~-~v~~~~~-~~~~~~~~~~~~~g~Dvvid  303 (362)
                      -.+++++|.| +||.+.+++..+...|+ +|+++.|+.+|.+.+. +++.. .+..... +++..     .-..+|+||+
T Consensus       123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~-----~~~~~DiVIn  196 (282)
T TIGR01809       123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLA-----IEKAAEVLVS  196 (282)
T ss_pred             cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhh-----cccCCCEEEE
Confidence            3578999999 79999999998999997 8999999988887774 33321 1111110 11111     1145899999


Q ss_pred             CCCh
Q 018013          304 SVGG  307 (362)
Q Consensus       304 ~~g~  307 (362)
                      |+..
T Consensus       197 aTp~  200 (282)
T TIGR01809       197 TVPA  200 (282)
T ss_pred             CCCC
Confidence            9873

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.01  E-value=0.15  Score=47.84  Aligned_cols=90  Identities=12%  Similarity=0.083  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|.| .|.+|+.+++.++.+|++|++..++.++..     +...+.  ...++.+.+     ...|+|+.++..
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l-----~~aDvvv~~lPl  200 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSFA--GREELSAFL-----SQTRVLINLLPN  200 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceeec--ccccHHHHH-----hcCCEEEECCCC
Confidence            3679999999 899999999999999999999987543321     222211  112333333     246888888773


Q ss_pred             --H---H-HHHHHHHhccCCEEEEEcCcc
Q 018013          308 --D---M-FNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 --~---~-~~~~~~~l~~~G~~v~~G~~~  330 (362)
                        +   . -...++.|+++..||.+|.-.
T Consensus       201 t~~T~~li~~~~l~~mk~ga~lIN~aRG~  229 (312)
T PRK15469        201 TPETVGIINQQLLEQLPDGAYLLNLARGV  229 (312)
T ss_pred             CHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence              1   2 235677888888888887644

>PLN02928 oxidoreductase family protein

Probab=95.01  E-value=0.12  Score=49.15  Aligned_cols=95  Identities=20%  Similarity=0.128  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcC-----CcEEEe--CCCccHHHHHHHHCCCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELG-----VDRVIN--YKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g-----~~~v~~--~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      .|+++.|.| .|.+|+.+++.++.+|++|+++.++..+... ..++     .....+  ....++.+.+.     ..|+|
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDiV  230 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADIV  230 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCEE
Confidence            578999999 8999999999999999999999886322111 1110     000010  01123444432     37999


Q ss_pred             EECCCh--H----HHHHHHHHhccCCEEEEEcCcc
Q 018013          302 YESVGG--D----MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       302 id~~g~--~----~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +.++..  +    .-...+..|+++..||.+|.-.
T Consensus       231 vl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~  265 (347)
T PLN02928        231 VLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGG  265 (347)
T ss_pred             EECCCCChHhhcccCHHHHhcCCCCeEEEECCCcc
Confidence            988762  1    1246778899998888887533

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.98  E-value=0.13  Score=50.61  Aligned_cols=44  Identities=32%  Similarity=0.520  Sum_probs=36.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH-HHHHHcCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA-QLLKELGV  275 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~-~~l~~~g~  275 (362)
                      +|.|+||.|.+|.+.+..++..|.+|+++++++++. +.+.++|+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCC
Confidence            689999889999999999999999999999987764 44455665

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.96  E-value=0.21  Score=48.73  Aligned_cols=99  Identities=19%  Similarity=0.182  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      -.+++|+|.| +|++|.+++..+...|+ +++++.++.++.+.+. +++...++.+  +++.+.+     ..+|+||+|+
T Consensus       179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--~~l~~~l-----~~aDiVI~aT  250 (414)
T PRK13940        179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--SELPQLI-----KKADIIIAAV  250 (414)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--HHHHHHh-----ccCCEEEECc
Confidence            5678999999 69999999999999996 8999999988877664 4542122221  1111111     3489999999


Q ss_pred             ChHHHHHHHHHhccCC-EEEEEcCcccccC
Q 018013          306 GGDMFNLCLKALAVYG-RLIVIGMISQYQG  334 (362)
Q Consensus       306 g~~~~~~~~~~l~~~G-~~v~~G~~~~~~~  334 (362)
                      +.+..-...+.++... -|++++.+..-.+
T Consensus       251 ~a~~~vi~~~~~~~~~~~~iDLavPRdidp  280 (414)
T PRK13940        251 NVLEYIVTCKYVGDKPRVFIDISIPQALDP  280 (414)
T ss_pred             CCCCeeECHHHhCCCCeEEEEeCCCCCCCc
Confidence            9632111111222111 4688887765443

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.94  E-value=0.22  Score=46.54  Aligned_cols=98  Identities=10%  Similarity=0.065  Sum_probs=68.1

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEecCCHhHHHHHH-HcC---CcEEEeCCCccHHHHHHHHC
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGN-TVVATCGGEHKAQLLK-ELG---VDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~-~~G~-~Vi~~~~~~~~~~~l~-~~g---~~~v~~~~~~~~~~~~~~~~  294 (362)
                      +...+++...++++|.| +|..|.+.++.+. ..+. +|.+..++.++.+.+. ++.   ....    ..+..+.+    
T Consensus       116 a~~~La~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~----~~~~~~av----  186 (304)
T PRK07340        116 AARTLAPAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE----PLDGEAIP----  186 (304)
T ss_pred             HHHHhCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE----ECCHHHHh----
Confidence            34455556778999999 7999999888876 4675 7999999988876653 342   2211    13333333    


Q ss_pred             CCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcCccc
Q 018013          295 PKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       295 ~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       .+.|+|+.|+.+  ..+.. +  +++|-.+..+|....
T Consensus       187 -~~aDiVitaT~s~~Pl~~~-~--~~~g~hi~~iGs~~p  221 (304)
T PRK07340        187 -EAVDLVVTATTSRTPVYPE-A--ARAGRLVVAVGAFTP  221 (304)
T ss_pred             -hcCCEEEEccCCCCceeCc-c--CCCCCEEEecCCCCC
Confidence             368999999885  34543 3  788889999987554

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.93  E-value=0.34  Score=42.42  Aligned_cols=91  Identities=14%  Similarity=-0.014  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .|++|+|.| +|.+|...+..+...|++|+++..... ....+.+.+. ..+..+....      ..=.++|+||-+++.
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~~------~~l~~adlViaaT~d   80 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWKQKEFEP------SDIVDAFLVIAATND   80 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCCh------hhcCCceEEEEcCCC
Confidence            578999999 599999999888889999998876432 2222222221 1122111110      011468999999998


Q ss_pred             HHHHHHHHHhccCCEEEEEc
Q 018013          308 DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       308 ~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +.++..+...+..+.++.+.
T Consensus        81 ~elN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         81 PRVNEQVKEDLPENALFNVI  100 (202)
T ss_pred             HHHHHHHHHHHHhCCcEEEC
Confidence            76666655554555565553

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.90  E-value=0.12  Score=41.58  Aligned_cols=88  Identities=22%  Similarity=0.334  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .+--+|-|+| +|-+|..+...++..|..|..+. ++.+..+.+.. ++...+.+..+         . -...|++|-++
T Consensus         8 ~~~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~---------~-~~~aDlv~iav   76 (127)
T PF10727_consen    8 AARLKIGIIG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE---------I-LRDADLVFIAV   76 (127)
T ss_dssp             ----EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG---------G-GCC-SEEEE-S
T ss_pred             CCccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc---------c-cccCCEEEEEe
Confidence            3456899999 69999999999999999988875 45555555543 33333333211         1 13589999999


Q ss_pred             ChHHHHHHHHHhccC-----CEEEEE
Q 018013          306 GGDMFNLCLKALAVY-----GRLIVI  326 (362)
Q Consensus       306 g~~~~~~~~~~l~~~-----G~~v~~  326 (362)
                      ..+.+..+++.|+..     |++|.-
T Consensus        77 pDdaI~~va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   77 PDDAIAEVAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             -CCHHHHHHHHHHCC--S-TT-EEEE
T ss_pred             chHHHHHHHHHHHHhccCCCCcEEEE
Confidence            998888888888765     666543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.86  E-value=0.24  Score=45.62  Aligned_cols=90  Identities=19%  Similarity=0.154  Sum_probs=62.2

Q ss_pred             HHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ......|+.... -.|++|+|.|.+.-+|.-++.++...||+|+++-+..                   .++.+..    
T Consensus       142 ~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t-------------------~~l~~~~----  198 (285)
T PRK14191        142 MGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT-------------------KDLSFYT----  198 (285)
T ss_pred             HHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc-------------------HHHHHHH----
Confidence            334444555554 5799999999877999999999999999998764321                   1222222    


Q ss_pred             CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +..|+|+-++|...+ .--+.+++|..++.+|...
T Consensus       199 -~~ADIvV~AvG~p~~-i~~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        199 -QNADIVCVGVGKPDL-IKASMVKKGAVVVDIGINR  232 (285)
T ss_pred             -HhCCEEEEecCCCCc-CCHHHcCCCcEEEEeeccc
Confidence             247899999886332 1134568888999998754

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.85  E-value=0.24  Score=45.67  Aligned_cols=89  Identities=17%  Similarity=0.181  Sum_probs=58.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHH-
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF-  310 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~-  310 (362)
                      +|.|+| .|.+|...+..++..|.+|+++++++++.+.+.+.|....   ...+. +.+     ...|+||.|+..... 
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~---~~~~~-~~~-----~~aDlVilavp~~~~~   71 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDE---ASTDL-SLL-----KDCDLVILALPIGLLL   71 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCccc---ccCCH-hHh-----cCCCEEEEcCCHHHHH
Confidence            588998 7999999888888889999999999988888877764211   11111 111     347888888875433 


Q ss_pred             ---HHHHHHhccCCEEEEEcCcc
Q 018013          311 ---NLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       311 ---~~~~~~l~~~G~~v~~G~~~  330 (362)
                         +.....++++-.+..+|+..
T Consensus        72 ~~~~~l~~~l~~~~ii~d~~Svk   94 (279)
T PRK07417         72 PPSEQLIPALPPEAIVTDVGSVK   94 (279)
T ss_pred             HHHHHHHHhCCCCcEEEeCcchH
Confidence               33334444555555555433

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.82  E-value=0.57  Score=41.12  Aligned_cols=90  Identities=18%  Similarity=0.198  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .|++|+|.| .|.+|..-++.+...|++|++++.... ....+.+.|--..+. ++... ..     -.++|+||-+++.
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~-~d-----l~~~~lVi~at~d   79 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLA-RCFDA-DI-----LEGAFLVIAATDD   79 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCH-HH-----hCCcEEEEECCCC
Confidence            578999999 699999999999999999999876533 333343434211221 21111 11     1468999999997


Q ss_pred             H-HHHHHHHHhccCCEEEEE
Q 018013          308 D-MFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       308 ~-~~~~~~~~l~~~G~~v~~  326 (362)
                      . .-.......+..|.+|.+
T Consensus        80 ~~ln~~i~~~a~~~~ilvn~   99 (205)
T TIGR01470        80 EELNRRVAHAARARGVPVNV   99 (205)
T ss_pred             HHHHHHHHHHHHHcCCEEEE
Confidence            5 444455555566666644

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.82  E-value=0.22  Score=41.73  Aligned_cols=88  Identities=18%  Similarity=0.130  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      =.|++|+|.| .|.+|..-++.+...|++|+++.  ++..+.+++++.-. +..+.  +    +...-.++|+|+-+++.
T Consensus        11 l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~-~~~~~--~----~~~dl~~a~lViaaT~d   80 (157)
T PRK06719         11 LHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYIT-WKQKT--F----SNDDIKDAHLIYAATNQ   80 (157)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcE-EEecc--c----ChhcCCCceEEEECCCC
Confidence            3688999999 69999999988888999998885  33334444444211 11111  1    11112568999999998


Q ss_pred             HHHHHHHHHhccCCEEEE
Q 018013          308 DMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       308 ~~~~~~~~~l~~~G~~v~  325 (362)
                      +..+..+...++.+.++.
T Consensus        81 ~e~N~~i~~~a~~~~~vn   98 (157)
T PRK06719         81 HAVNMMVKQAAHDFQWVN   98 (157)
T ss_pred             HHHHHHHHHHHHHCCcEE
Confidence            766666655544443433

>PLN02650 dihydroflavonol-4-reductase

Probab=94.80  E-value=0.16  Score=48.21  Aligned_cols=98  Identities=21%  Similarity=0.242  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCC--c-EEE--eCCCc-cHHHHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGV--D-RVI--NYKAE-DIKTVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~--~-~v~--~~~~~-~~~~~~~~~~~~g  297 (362)
                      ...++|||+||+|.+|..++..+...|.+|++++++.++.+.+..    .+.  . .++  |..+. .+.+.+     .+
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~   77 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI-----RG   77 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH-----hC
Confidence            346789999999999999999999899999998887655443322    121  1 122  33222 222322     25


Q ss_pred             eeEEEECCCh------H----H-------HHHHHHHhccC---CEEEEEcCcc
Q 018013          298 FDIIYESVGG------D----M-------FNLCLKALAVY---GRLIVIGMIS  330 (362)
Q Consensus       298 ~Dvvid~~g~------~----~-------~~~~~~~l~~~---G~~v~~G~~~  330 (362)
                      +|.||.+++.      +    .       ...+++.+.+.   ++||.+++.+
T Consensus        78 ~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~  130 (351)
T PLN02650         78 CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAG  130 (351)
T ss_pred             CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchh
Confidence            8999998752      1    1       12334455443   4899887664

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.79  E-value=0.26  Score=45.41  Aligned_cols=88  Identities=23%  Similarity=0.255  Sum_probs=64.1

Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .....|+.... -.|++|+|.|.+.-+|.-++.++...|++|+++-+                   +..++.+.+     
T Consensus       144 aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs-------------------~t~~l~~~~-----  199 (285)
T PRK14189        144 GVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS-------------------KTRDLAAHT-----  199 (285)
T ss_pred             HHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC-------------------CCCCHHHHh-----
Confidence            33444555555 78999999998778899999999999999987543                   223333333     


Q ss_pred             CceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          296 KGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       296 ~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +..|+|+-++|.. .+..  +.++++-.+|.+|...
T Consensus       200 ~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~  233 (285)
T PRK14189        200 RQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR  233 (285)
T ss_pred             hhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence            2479999999963 3332  7899999999999765

>PRK07402 precorrin-6B methylase; Provisional

Probab=94.75  E-value=0.78  Score=39.71  Aligned_cols=99  Identities=19%  Similarity=0.231  Sum_probs=59.6

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCCCc
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      +..+++++||=.|  .|.|..++.+++.. +.+|++++.+++..+.+++    ++.+  .++..+   ..+.+.......
T Consensus        36 l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d---~~~~~~~~~~~~  110 (196)
T PRK07402         36 LRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGS---APECLAQLAPAP  110 (196)
T ss_pred             cCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECc---hHHHHhhCCCCC
Confidence            3337888887777  34455566666654 5799999999888777653    5553  223222   222221121222


Q ss_pred             eeEEEECCC--hHHHHHHHHHhccCCEEEEEcC
Q 018013          298 FDIIYESVG--GDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       298 ~Dvvid~~g--~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      -+++++...  ...++.+.+.|+++|+|+..-.
T Consensus       111 d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        111 DRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             CEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence            234444332  2678899999999999988743

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.73  E-value=1.1  Score=35.00  Aligned_cols=93  Identities=24%  Similarity=0.174  Sum_probs=63.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHH--
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF--  310 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~--  310 (362)
                      |+|.| .|.+|..+++.++..+.+|++++.++++.+.+++.|.. ++..+..+. +.+++..-..+|.++-+++.+..  
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~-~~l~~a~i~~a~~vv~~~~~d~~n~   77 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDP-EVLERAGIEKADAVVILTDDDEENL   77 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSH-HHHHHTTGGCESEEEEESSSHHHHH
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhh-hHHhhcCccccCEEEEccCCHHHHH
Confidence            57888 68999999999999667999999999999999988865 443333332 23333333568999988886422  


Q ss_pred             --HHHHHHhccCCEEEEEcC
Q 018013          311 --NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       311 --~~~~~~l~~~G~~v~~G~  328 (362)
                        -...+.+.+..+++..-.
T Consensus        78 ~~~~~~r~~~~~~~ii~~~~   97 (116)
T PF02254_consen   78 LIALLARELNPDIRIIARVN   97 (116)
T ss_dssp             HHHHHHHHHTTTSEEEEEES
T ss_pred             HHHHHHHHHCCCCeEEEEEC
Confidence              233445556677765533

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.72  E-value=0.14  Score=46.54  Aligned_cols=72  Identities=11%  Similarity=0.069  Sum_probs=52.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE-eCCC-ccHHHHHHHHCCCceeEEEECCCh
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI-NYKA-EDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~~-~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      +|||.||+|- |..++..+...|.+|++++.++...+.+...|...+. +..+ .++.+.   ....++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~---l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREF---LKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHH---HHhcCCCEEEEcCCH
Confidence            6999998776 9888877778899999999998877777776655444 3222 222222   335679999999874

This enzyme was found to be a monomer by gel filtration.

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.71  E-value=0.19  Score=47.58  Aligned_cols=89  Identities=21%  Similarity=0.221  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|..+++.++.+|++|++.+++.... .....+..    .  .++.+.+.     ..|+|+.++.. 
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~----~--~~l~ell~-----~aDiV~l~lP~t  215 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAE----Y--RPLEELLR-----ESDFVSLHVPLT  215 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCE----e--cCHHHHHh-----hCCEEEEeCCCC
Confidence            578999999 79999999999999999999999865432 22334431    1  23333332     36888888763 


Q ss_pred             -H---HH-HHHHHHhccCCEEEEEcCcc
Q 018013          308 -D---MF-NLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -~---~~-~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +   .+ ...+..|+++..+|.++.-.
T Consensus       216 ~~T~~~i~~~~~~~mk~ga~lIN~aRg~  243 (333)
T PRK13243        216 KETYHMINEERLKLMKPTAILVNTARGK  243 (333)
T ss_pred             hHHhhccCHHHHhcCCCCeEEEECcCch
Confidence             1   12 35677788888888776544

>PLN02244 tocopherol O-methyltransferase

Probab=94.69  E-value=0.21  Score=47.53  Aligned_cols=94  Identities=18%  Similarity=0.184  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +++++||=.|  .|.|..+..+++..|++|++++.++...+.+++    .|..   .++..+..++     ....+.+|+
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~-----~~~~~~FD~  189 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ-----PFEDGQFDL  189 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC-----CCCCCCccE
Confidence            6788998888  355677788888889999999999887766643    3432   1111111110     012356999


Q ss_pred             EEECCCh-------HHHHHHHHHhccCCEEEEEcC
Q 018013          301 IYESVGG-------DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       301 vid~~g~-------~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      |+.....       ..++++.+.|++||+|+....
T Consensus       190 V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        190 VWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             EEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9875431       467889999999999998653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.69  E-value=0.029  Score=51.50  Aligned_cols=66  Identities=18%  Similarity=0.156  Sum_probs=44.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      |||+||+|-+|..+++.+...|.+|++++++..+...+...+   +.+........    . -.++|+||++++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~----~-~~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLAESE----A-LEGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccchhh----h-cCCCCEEEECCC
Confidence            689999999999999988888999999999876543322111   11111111111    1 146999999987

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.65  E-value=0.29  Score=45.44  Aligned_cols=88  Identities=20%  Similarity=0.207  Sum_probs=63.9

Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .....|+.... -.|++|.|.|.++-+|.-++.++...|++|+++.+...                   +..+..     
T Consensus       145 aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------------~l~e~~-----  200 (301)
T PRK14194        145 GCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------------DAKALC-----  200 (301)
T ss_pred             HHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------------CHHHHH-----
Confidence            33444555555 68999999997779999999999999999998865322                   222222     


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcc
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +..|+|+-++|. ..+...|  +++|..+|.+|...
T Consensus       201 ~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin~  234 (301)
T PRK14194        201 RQADIVVAAVGRPRLIDADW--LKPGAVVIDVGINR  234 (301)
T ss_pred             hcCCEEEEecCChhcccHhh--ccCCcEEEEecccc
Confidence            237999999985 4444444  88999999998654

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.65  E-value=0.41  Score=38.62  Aligned_cols=93  Identities=17%  Similarity=0.208  Sum_probs=59.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHCC--CEEEEecCCH--hH-HHHHHHcCCcEEEeCCCccHH---HHH--------------
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGE--HK-AQLLKELGVDRVINYKAEDIK---TVF--------------  290 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~--~~-~~~l~~~g~~~v~~~~~~~~~---~~~--------------  290 (362)
                      |.|.|++|.+|..++.+.+...  ++|++.....  ++ .++++++.+..+.-.+.+...   +..              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            5799999999999999999888  6877776532  22 234467888776655543221   111              


Q ss_pred             --HH-HCCCceeEEEECCC-hHHHHHHHHHhccCCEEEE
Q 018013          291 --KE-EFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       291 --~~-~~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~  325 (362)
                        .+ .....+|+|+++.. ...+.-.+..++.+=++.+
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence              11 12257899999855 4677888888887766543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=94.64  E-value=0.084  Score=51.21  Aligned_cols=75  Identities=24%  Similarity=0.341  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHH
Q 018013          228 ASGKKVLVTAA----------------AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVF  290 (362)
Q Consensus       228 ~~g~~VlI~ga----------------~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~  290 (362)
                      -.|++|||+||                +|.+|.++++.+...|++|+.+.++.+ .+.  ..+. ..++..+ .++.+.+
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~--~~~~-~~~dv~~~~~~~~~v  261 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT--PAGV-KRIDVESAQEMLDAV  261 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC--CCCc-EEEccCCHHHHHHHH
Confidence            47899999998                566999999999999999999987642 111  1122 3344443 4444554


Q ss_pred             HHHCCCceeEEEECCCh
Q 018013          291 KEEFPKGFDIIYESVGG  307 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g~  307 (362)
                      ....+ .+|++|+++|-
T Consensus       262 ~~~~~-~~DilI~~Aav  277 (399)
T PRK05579        262 LAALP-QADIFIMAAAV  277 (399)
T ss_pred             HHhcC-CCCEEEEcccc
Confidence            44333 58999999883

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.63  E-value=0.14  Score=40.79  Aligned_cols=92  Identities=16%  Similarity=0.173  Sum_probs=54.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHh-HHHHHHH-c----CC-cEEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEH-KAQLLKE-L----GV-DRVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~-~~~~l~~-~----g~-~~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      +|.|.||+|-+|..+++++... .++++.+..+.. .-..+.+ +    +. +..+..  .+....      .++|+||.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~Dvvf~   72 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEEL------SDVDVVFL   72 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHH------TTESEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHh------hcCCEEEe
Confidence            6899999999999999888764 456555544433 2222222 1    12 222221  111111      56999999


Q ss_pred             CCChHHHHHHHHHh-ccCCEEEEEcCccc
Q 018013          304 SVGGDMFNLCLKAL-AVYGRLIVIGMISQ  331 (362)
Q Consensus       304 ~~g~~~~~~~~~~l-~~~G~~v~~G~~~~  331 (362)
                      |++..........+ +++-++|..+..-.
T Consensus        73 a~~~~~~~~~~~~~~~~g~~ViD~s~~~R  101 (121)
T PF01118_consen   73 ALPHGASKELAPKLLKAGIKVIDLSGDFR  101 (121)
T ss_dssp             -SCHHHHHHHHHHHHHTTSEEEESSSTTT
T ss_pred             cCchhHHHHHHHHHhhCCcEEEeCCHHHh
Confidence            99987656555555 56667777765443

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=94.61  E-value=0.11  Score=49.51  Aligned_cols=30  Identities=27%  Similarity=0.318  Sum_probs=26.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEe
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVAT  260 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~  260 (362)
                      ++|||+||+|.+|..+++.+...|.+++++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~   31 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVV   31 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEE
Confidence            479999999999999999999999865544

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.61  E-value=0.11  Score=50.05  Aligned_cols=103  Identities=15%  Similarity=0.158  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ...+|.|.||+|-+|+.+++++... ..++..+.+.....+.+.+... ++......++.+.-.... .++|+||-+++.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~-~l~~~~~~~~~~~~~~~~-~~~DvVf~Alp~  114 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP-HLITQDLPNLVAVKDADF-SDVDAVFCCLPH  114 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc-cccCccccceecCCHHHh-cCCCEEEEcCCH
Confidence            3458999999999999999999877 5688888775443322222111 111111010110000011 469999999998


Q ss_pred             HHHHHHHHHhccCCEEEEEcCccccc
Q 018013          308 DMFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       308 ~~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                      +........++.+-++|+++..-...
T Consensus       115 ~~s~~i~~~~~~g~~VIDlSs~fRl~  140 (381)
T PLN02968        115 GTTQEIIKALPKDLKIVDLSADFRLR  140 (381)
T ss_pred             HHHHHHHHHHhCCCEEEEcCchhccC
Confidence            77777777777777888887655433

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.59  E-value=0.12  Score=51.46  Aligned_cols=74  Identities=22%  Similarity=0.434  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH---------------------hHHHHHHHcCCcEEEeCCC-c-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE---------------------HKAQLLKELGVDRVINYKA-E-  284 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~---------------------~~~~~l~~~g~~~v~~~~~-~-  284 (362)
                      ..+++|+|+| +|..|+.++..++..|.+|++....+                     ...+.++++|++..++..- . 
T Consensus       139 ~~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  217 (467)
T TIGR01318       139 PTGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD  217 (467)
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc
Confidence            4689999999 79999999999999999998887653                     2456677889876655432 1 


Q ss_pred             -cHHHHHHHHCCCceeEEEECCCh
Q 018013          285 -DIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       285 -~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                       .+...    . .++|.||.++|.
T Consensus       218 ~~~~~~----~-~~~D~vilAtGa  236 (467)
T TIGR01318       218 ISLDDL----L-EDYDAVFLGVGT  236 (467)
T ss_pred             cCHHHH----H-hcCCEEEEEeCC
Confidence             12211    1 358999999985

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=94.55  E-value=0.27  Score=44.08  Aligned_cols=99  Identities=25%  Similarity=0.333  Sum_probs=61.4

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCCC
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ...++|++||=.+  .|+|..+..+++..+  .+|++++-+++-++.+++    .+..  ..+..+.+++.     ....
T Consensus        43 ~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~~d~  115 (233)
T PF01209_consen   43 LGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----FPDN  115 (233)
T ss_dssp             HT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S-TT
T ss_pred             cCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----CCCC
Confidence            3448888888886  567888888898876  599999999998877753    3332  22222222221     1235


Q ss_pred             ceeEEEECCCh-------HHHHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGG-------DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~-------~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .+|+|.-+.|-       ..++++.+.|+|||+++.+....
T Consensus       116 sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~  156 (233)
T PF01209_consen  116 SFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK  156 (233)
T ss_dssp             -EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred             ceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence            69999988772       47889999999999988776533

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.55  E-value=0.46  Score=46.62  Aligned_cols=97  Identities=20%  Similarity=0.225  Sum_probs=60.1

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHH----HcCCc-EE--EeCCCccHHHHHHHHCCC
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLK----ELGVD-RV--INYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~~~~~~~~~~~~~~  296 (362)
                      +..++|++||=.|+  |.|..+.++++..+ .+|++++.++++.+.++    .+|.. .+  .+.+.......   ....
T Consensus       234 L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~---~~~~  308 (426)
T TIGR00563       234 LAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQW---AENE  308 (426)
T ss_pred             hCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccccc---cccc
Confidence            34578898887773  33444555555554 69999999999887764    46665 22  22221111100   1124


Q ss_pred             ceeEEEE---CCCh--------------------------HHHHHHHHHhccCCEEEEE
Q 018013          297 GFDIIYE---SVGG--------------------------DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       297 g~Dvvid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~  326 (362)
                      .+|.||-   |+|.                          ..+..+++.|++||++|..
T Consensus       309 ~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys  367 (426)
T TIGR00563       309 QFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA  367 (426)
T ss_pred             ccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            5898874   4441                          2566788999999999864

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK04457 spermidine synthase; Provisional

Probab=94.55  E-value=0.41  Score=43.68  Aligned_cols=92  Identities=18%  Similarity=0.234  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHc-CC----c--EEEeCCCccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKEL-GV----D--RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~-g~----~--~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      .++++||+.|.  |.|..+..+++.. +.+|++++.+++-.+.+++. +.    +  .++.   .+..+.+.. ....+|
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~---~Da~~~l~~-~~~~yD  138 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE---ADGAEYIAV-HRHSTD  138 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE---CCHHHHHHh-CCCCCC
Confidence            45678999993  4477777777766 46999999999988888753 32    1  2222   333344432 235699


Q ss_pred             EEEECC--C---------hHHHHHHHHHhccCCEEEE
Q 018013          300 IIYESV--G---------GDMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       300 vvid~~--g---------~~~~~~~~~~l~~~G~~v~  325 (362)
                      +|+-..  +         .+.++.+.++|+++|.++.
T Consensus       139 ~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        139 VILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             EEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            887321  1         2678899999999999987

>PRK00536 speE spermidine synthase; Provisional

Probab=94.53  E-value=0.49  Score=43.11  Aligned_cols=139  Identities=17%  Similarity=0.034  Sum_probs=80.1

Q ss_pred             CeEEEecCCCeeeEEEeeCCCeeeCCCCCHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE
Q 018013          177 TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT  256 (362)
Q Consensus       177 d~V~~~~~g~~~~~~~v~~~~~~~ip~~~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~  256 (362)
                      +++..+-...|....++|... ..--+.+..--.+.-+      ++  ..+...++|||.|  ||=|.++=.++|+-. +
T Consensus        29 Q~i~i~es~~fGr~LvLD~~~-~te~dEfiYHEmLvHp------pl--~~h~~pk~VLIiG--GGDGg~~REvLkh~~-~   96 (262)
T PRK00536         29 NILEIFKSKDFGEIAMLNKQL-LFKNFLHIESELLAHM------GG--CTKKELKEVLIVD--GFDLELAHQLFKYDT-H   96 (262)
T ss_pred             cEEEEEEccccccEEEEeeee-eecchhhhHHHHHHHH------HH--hhCCCCCeEEEEc--CCchHHHHHHHCcCC-e
Confidence            455666666777777777222 2111122111111111      11  2235679999998  455777888888764 9


Q ss_pred             EEEecCCHhHHHHHHHcCCc--EEEeCCCccHHHHHHHHCCCceeEEEEC-CC-hHHHHHHHHHhccCCEEEEEc
Q 018013          257 VVATCGGEHKAQLLKELGVD--RVINYKAEDIKTVFKEEFPKGFDIIYES-VG-GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       257 Vi~~~~~~~~~~~l~~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid~-~g-~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      |..+.-+++-.+..+++-..  ..++...-.+...+.+...+.+|+||-- +- .+.++.+.++|+++|.+|.=.
T Consensus        97 v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs~~~~~fy~~~~~~L~~~Gi~v~Qs  171 (262)
T PRK00536         97 VDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQEPDIHKIDGLKRMLKEDGVFISVA  171 (262)
T ss_pred             eEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcCCCChHHHHHHHHhcCCCcEEEECC
Confidence            99999988878777762211  0111111011112223333569987643 33 467889999999999998743

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=94.53  E-value=0.073  Score=49.26  Aligned_cols=82  Identities=21%  Similarity=0.217  Sum_probs=48.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChH--
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGD--  308 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~--  308 (362)
                      +|||+|++|-+|.++...++..|.+|+.+.+.+              +|..+ +.+.+.+..   ..+|+||+|++-.  
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~--------------~dl~d~~~~~~~~~~---~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRSD--------------LDLTDPEAVAKLLEA---FKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC--------------S-TTSHHHHHHHHHH---H--SEEEE------H
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh--------------cCCCCHHHHHHHHHH---hCCCeEeccceeecH
Confidence            799999999999999999999999999997651              12222 222333332   2489999998621  


Q ss_pred             ----------------HHHHHHHH-hccCCEEEEEcCcc
Q 018013          309 ----------------MFNLCLKA-LAVYGRLIVIGMIS  330 (362)
Q Consensus       309 ----------------~~~~~~~~-l~~~G~~v~~G~~~  330 (362)
                                      ......+. ...+.++|.+.+-.
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~  103 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDY  103 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGG
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccE
Confidence                            01122233 34567998887753

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=94.49  E-value=0.36  Score=50.29  Aligned_cols=102  Identities=19%  Similarity=0.149  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCH--hHHHHHHHc----CCcEE-EeCCCccHHHHHHHHCCCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGE--HKAQLLKEL----GVDRV-INYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~--~~~~~l~~~----g~~~v-~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      .+++|||+||+|-+|..+++.+...  +.+|+++++..  .+...+...    ++..+ .|..+.+....  .....++|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~--~~~~~~~D   82 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNY--LLITEGID   82 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHH--HHhhcCCC
Confidence            4689999999999999999888766  67899887642  222222211    22211 22222222111  12235799


Q ss_pred             EEEECCChHH------------------HHHHHHHhccC---CEEEEEcCcccc
Q 018013          300 IIYESVGGDM------------------FNLCLKALAVY---GRLIVIGMISQY  332 (362)
Q Consensus       300 vvid~~g~~~------------------~~~~~~~l~~~---G~~v~~G~~~~~  332 (362)
                      +||++++...                  ....++.++..   .+||.+++...|
T Consensus        83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vy  136 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY  136 (668)
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHh
Confidence            9999987310                  12344444443   489999886544

>PLN02583 cinnamoyl-CoA reductase

Probab=94.49  E-value=0.32  Score=45.14  Aligned_cols=36  Identities=33%  Similarity=0.275  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      .++++|+|+||+|.+|..+++.+...|.+|++++++
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~   39 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK   39 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence            467899999999999999999999999999999875

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=94.47  E-value=0.28  Score=42.91  Aligned_cols=34  Identities=32%  Similarity=0.331  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGG  263 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~  263 (362)
                      .+.+|+|.| .|++|..+++.+...|. ++++++.+
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            457899999 89999999999999998 88888865

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02823 spermine synthase

Probab=94.44  E-value=2  Score=40.66  Aligned_cols=96  Identities=14%  Similarity=0.227  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCC-c-EEE-eCC----CccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGV-D-RVI-NYK----AEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~-~-~v~-~~~----~~~~~~~~~~~~~~g~D  299 (362)
                      ...++|||.|+  |-|..+..+++..+. +|+++..+++-.+.++++-. . ..+ |.+    -.|....++ ...+.+|
T Consensus       102 ~~pk~VLiiGg--G~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yD  178 (336)
T PLN02823        102 PNPKTVFIMGG--GEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFD  178 (336)
T ss_pred             CCCCEEEEECC--CchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCcc
Confidence            45678999994  456666677776654 89999999888888876321 1 111 111    123334443 2346799


Q ss_pred             EEEECCC-------------hHHHH-HHHHHhccCCEEEEE
Q 018013          300 IIYESVG-------------GDMFN-LCLKALAVYGRLIVI  326 (362)
Q Consensus       300 vvid~~g-------------~~~~~-~~~~~l~~~G~~v~~  326 (362)
                      +||--+.             .+.++ .+.+.|+++|.++.-
T Consensus       179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q  219 (336)
T PLN02823        179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ  219 (336)
T ss_pred             EEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence            8875421             13566 788999999998754

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.44  E-value=0.029  Score=41.82  Aligned_cols=81  Identities=25%  Similarity=0.288  Sum_probs=54.3

Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc---EEEeCCCccHHHHHHHHCCCceeEEEECCCh-------HH
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD---RVINYKAEDIKTVFKEEFPKGFDIIYESVGG-------DM  309 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~---~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-------~~  309 (362)
                      .|.|..+..+++..+.+|++++.+++..+.+++....   .+...+..++     ....+.+|+|+.+..-       ..
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l-----~~~~~sfD~v~~~~~~~~~~~~~~~   79 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDL-----PFPDNSFDVVFSNSVLHHLEDPEAA   79 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSS-----SS-TT-EEEEEEESHGGGSSHHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhC-----ccccccccccccccceeeccCHHHH
Confidence            3478888888888677999999999988888764332   1222222221     0123569999886542       46


Q ss_pred             HHHHHHHhccCCEEEE
Q 018013          310 FNLCLKALAVYGRLIV  325 (362)
Q Consensus       310 ~~~~~~~l~~~G~~v~  325 (362)
                      ++++.+.|+++|+++.
T Consensus        80 l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   80 LREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHcCcCeEEeC
Confidence            7899999999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PLN00203 glutamyl-tRNA reductase

Probab=94.42  E-value=0.66  Score=46.60  Aligned_cols=97  Identities=20%  Similarity=0.315  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcC-CcE-EEeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELG-VDR-VINYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g-~~~-v~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+.+|+|.| +|.+|.++++.+...|+ +|+++.++.++.+.+. +++ ... +.+.  ++..+.+     ...|+||.|
T Consensus       265 ~~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~--~dl~~al-----~~aDVVIsA  336 (519)
T PLN00203        265 ASARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL--DEMLACA-----AEADVVFTS  336 (519)
T ss_pred             CCCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH--hhHHHHH-----hcCCEEEEc
Confidence            478999999 69999999999999997 7999999998887775 453 221 1111  1222221     358999999


Q ss_pred             CChH---HHHHHHHHhc----cCC---EEEEEcCccccc
Q 018013          305 VGGD---MFNLCLKALA----VYG---RLIVIGMISQYQ  333 (362)
Q Consensus       305 ~g~~---~~~~~~~~l~----~~G---~~v~~G~~~~~~  333 (362)
                      ++..   .....++.+.    ..|   .||+++.+..-.
T Consensus       337 T~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdId  375 (519)
T PLN00203        337 TSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVG  375 (519)
T ss_pred             cCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCc
Confidence            8742   1233333332    223   588888876433

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=94.36  E-value=0.21  Score=41.48  Aligned_cols=76  Identities=17%  Similarity=0.201  Sum_probs=46.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHH-------HHHHHcCCcE-EE--eCCC-ccHHHHHHHHC--CC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKA-------QLLKELGVDR-VI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~-------~~l~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      ++++|+|++|++|..+++.+...|+ .|+.+.+++++.       +.+++.+... .+  |..+ ..+.+.+....  -.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999988888887 677777654332       2333344432 22  2222 22233222221  24


Q ss_pred             ceeEEEECCC
Q 018013          297 GFDIIYESVG  306 (362)
Q Consensus       297 g~Dvvid~~g  306 (362)
                      .+|.++++.|
T Consensus        81 ~id~li~~ag   90 (180)
T smart00822       81 PLRGVIHAAG   90 (180)
T ss_pred             CeeEEEEccc
Confidence            5899999987

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03075 nicotianamine synthase; Provisional

Probab=94.35  E-value=0.36  Score=44.71  Aligned_cols=104  Identities=16%  Similarity=0.147  Sum_probs=67.5

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHc-----CCcEEEeCCCccHHHHHHHH
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKEL-----GVDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~-----g~~~v~~~~~~~~~~~~~~~  293 (362)
                      .|......++++|+-.| +|+.++.++-+++.+  +.+++.++.+++..+.+++.     |...-+.....+..+..  .
T Consensus       115 ~L~~~~~~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~--~  191 (296)
T PLN03075        115 LLSQHVNGVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVT--E  191 (296)
T ss_pred             HHHHhhcCCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcc--c
Confidence            34334445789999999 888888877777543  35899999999888777642     22211111112222211  0


Q ss_pred             CCCceeEEEECC------C--hHHHHHHHHHhccCCEEEEEc
Q 018013          294 FPKGFDIIYESV------G--GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       294 ~~~g~Dvvid~~------g--~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      ..+++|+||-.+      .  ...++...+.|++||.++.-.
T Consensus       192 ~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        192 SLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             ccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            125699998875      1  157889999999999988543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.29  E-value=0.46  Score=43.71  Aligned_cols=91  Identities=19%  Similarity=0.160  Sum_probs=65.3

Q ss_pred             hHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHH
Q 018013          214 SGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE  292 (362)
Q Consensus       214 ~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~  292 (362)
                      .....+..|+.... -.|++++|.|-+.-+|.-++.++...|++|+++-+.                   ..++.+..  
T Consensus       142 Tp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~-------------------T~~l~~~~--  200 (285)
T PRK10792        142 TPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF-------------------TKNLRHHV--  200 (285)
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC-------------------CCCHHHHH--
Confidence            33444555666655 679999999977779999999999999999887543                   12333332  


Q ss_pred             HCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          293 EFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       293 ~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                         +..|+++.++|.. .+.  -+.++++-.+|.+|...
T Consensus       201 ---~~ADIvi~avG~p~~v~--~~~vk~gavVIDvGin~  234 (285)
T PRK10792        201 ---RNADLLVVAVGKPGFIP--GEWIKPGAIVIDVGINR  234 (285)
T ss_pred             ---hhCCEEEEcCCCccccc--HHHcCCCcEEEEccccc
Confidence               3479999999863 333  26789999999999553

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.28  E-value=0.5  Score=44.60  Aligned_cols=92  Identities=21%  Similarity=0.144  Sum_probs=65.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE------Ee---CCCccHHHHHHHHCCCceeEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV------IN---YKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v------~~---~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      -+|.|.| +|.+|.+.+..+...|.+|.+..+++++.+.+.+.+....      +.   ....+..+.+     ...|+|
T Consensus         5 m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V   78 (328)
T PRK14618          5 MRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA   78 (328)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence            4789998 7999999999888889999999999888877765421100      00   0012222221     358999


Q ss_pred             EECCChHHHHHHHHHhccCCEEEEEcC
Q 018013          302 YESVGGDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       302 id~~g~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      +-|+....+...++.++++-.++.+..
T Consensus        79 i~~v~~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         79 VVAVPSKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             EEECchHHHHHHHHhcCcCCEEEEEee
Confidence            999998878888888888777776644

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.26  E-value=0.097  Score=43.21  Aligned_cols=87  Identities=16%  Similarity=0.208  Sum_probs=56.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeC-------CC--ccHHHHHHHHCCCceeEEEE
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY-------KA--EDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~-------~~--~~~~~~~~~~~~~g~Dvvid  303 (362)
                      |+|.| +|++|...+..++..|.+|..+.+++ +.+.+++.|.......       ..  ...     ......+|+||-
T Consensus         1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv   73 (151)
T PF02558_consen    1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV   73 (151)
T ss_dssp             EEEES-TSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred             CEEEC-cCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence            68888 79999888887777999999999987 7777877665321111       00  111     112356999999


Q ss_pred             CCChHHHHHHHH----HhccCCEEEEE
Q 018013          304 SVGGDMFNLCLK----ALAVYGRLIVI  326 (362)
Q Consensus       304 ~~g~~~~~~~~~----~l~~~G~~v~~  326 (362)
                      |+-......+++    .+.++..++.+
T Consensus        74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~  100 (151)
T PF02558_consen   74 AVKAYQLEQALQSLKPYLDPNTTIVSL  100 (151)
T ss_dssp             -SSGGGHHHHHHHHCTGEETTEEEEEE
T ss_pred             EecccchHHHHHHHhhccCCCcEEEEE
Confidence            998644444444    44455566655

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=94.23  E-value=0.5  Score=45.64  Aligned_cols=108  Identities=30%  Similarity=0.350  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-----cCCcEEEeC--CCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-----LGVDRVINY--KAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-----~g~~~v~~~--~~~~~~~~~~~~~~~g~Dv  300 (362)
                      ....+|+|.||+|.+|+..++.++..|..|.+.+++.++.+.+..     .+...+-..  ...+....+......+..+
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~  156 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVI  156 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccccee
Confidence            567899999999999999999999999999999998877655422     233222211  1233333333333445677


Q ss_pred             EEECCCh---H------------HHHHHHHHhccCC--EEEEEcCcccccCC
Q 018013          301 IYESVGG---D------------MFNLCLKALAVYG--RLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~---~------------~~~~~~~~l~~~G--~~v~~G~~~~~~~~  335 (362)
                      ++.|.|+   .            .....+++...-|  +++++|.+......
T Consensus       157 v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~  208 (411)
T KOG1203|consen  157 VIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFN  208 (411)
T ss_pred             EEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccC
Confidence            7877764   1            2335556655555  89999887765543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=94.22  E-value=0.14  Score=43.46  Aligned_cols=98  Identities=26%  Similarity=0.235  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeC-CC----------------ccHHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY-KA----------------EDIKTVFK  291 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~-~~----------------~~~~~~~~  291 (362)
                      +..+|+|+| +|.+|+.++.+++.+|++|++.+...++.+.++..+...+... .+                ......+.
T Consensus        19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            457899999 7999999999999999999999999998888888777544321 00                11111221


Q ss_pred             HHCCCceeEEEECC---Ch----HHHHHHHHHhccCCEEEEEcC
Q 018013          292 EEFPKGFDIIYESV---GG----DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       292 ~~~~~g~Dvvid~~---g~----~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      +.. ..+|+++.+.   +.    -..+..++.|+++..++.+..
T Consensus        98 ~~i-~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~  140 (168)
T PF01262_consen   98 EFI-APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC  140 (168)
T ss_dssp             HHH-HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred             HHH-hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence            111 3478988642   11    134577888999999998855

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	362
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		3e-63
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		4e-62
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		8e-62
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		3e-21
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		4e-20
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		2e-19
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		4e-18
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		1e-17
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-17
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		1e-16
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		3e-16
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		8e-16
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		8e-16
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		1e-15
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		5e-15
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		8e-15
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-14
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		3e-14
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		3e-14
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		4e-14
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		4e-14
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		5e-14
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		6e-14
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		2e-13
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		2e-13
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		2e-13
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		7e-13
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-12
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-12
3pi7_A	349	Crystal Structure Of A Putative Nadph:quinone Reduc		4e-11
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		4e-11
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		1e-10
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		2e-10
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-10
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		2e-10
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		4e-10
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		1e-09
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		1e-09
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		7e-09
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		8e-09
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		2e-08
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		2e-08
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		2e-08
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		7e-08
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-07
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		1e-07
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-07
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		2e-07
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		5e-07
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		7e-07
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		8e-07
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		9e-07
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		1e-06
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		2e-06
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		2e-06
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		5e-06
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		6e-06
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		8e-06
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		1e-05
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		1e-05
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		1e-05
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		1e-05
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		1e-05
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		2e-05
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		2e-05
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		1e-04
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		2e-04
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		3e-04
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		5e-04
3nx4_A	324	Crystal Structure Of The Yhdh Oxidoreductase From S		6e-04

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/278 (49%), Positives = 179/278 (64%), Gaps = 9/278 (3%)
Query: 83  LPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
           +P++ +KLVV  L+ NFR+A T+    P+ LP     +LV+  F GVNASD+N+S+GRY 
Sbjct: 28  IPQAMQKLVVTRLSPNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGRY- 85
Query: 142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILP 200
               D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+    P
Sbjct: 86  ----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATP 141
Query: 201 VARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
           V    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+QL+K A   V+ 
Sbjct: 142 VPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 201
Query: 260 TCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
           TC  + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + ALA 
Sbjct: 202 TCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALAT 261
Query: 320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
            GRLIVIG IS YQ   G  P     L  K+L KS +V
Sbjct: 262 KGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASV 299

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score =  234 bits (598), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/281 (48%), Positives = 177/281 (62%), Gaps = 9/281 (3%)
Query: 80  NVQLPESFEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSG 138
           N+      +KLVV  L+ NFR+A T+    P+ LP     +LV+  F GVNASD+N+S+G
Sbjct: 17  NLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAG 75
Query: 139 RYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKH 197
           RY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+  
Sbjct: 76  RY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASI 130
Query: 198 ILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNT 256
             PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+QL+K A   
Sbjct: 131 ATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 190
Query: 257 VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKA 316
           V+ TC  + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + A
Sbjct: 191 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDA 250
Query: 317 LAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           LA  GRLIVIG IS YQ   G  P     L  K+L KS +V
Sbjct: 251 LATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASV 291

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score =  234 bits (596), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/274 (49%), Positives = 175/274 (63%), Gaps = 9/274 (3%)
Query: 87  FEKLVVHTLNHNFRDA-TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN 145
            +KLVV  L+ NFR+A T+    P+ LP     +LV+  F GVNASD+N+S+GRY     
Sbjct: 3   MQKLVVTRLSPNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGRY----- 56
Query: 146 DIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILPVARP 204
           D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+    PV   
Sbjct: 57  DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSV 116
Query: 205 DPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG 263
            PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+QL+K A   V+ TC  
Sbjct: 117 KPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 176
Query: 264 EHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRL 323
           + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + ALA  GRL
Sbjct: 177 DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRL 236
Query: 324 IVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           IVIG IS YQ   G  P     L  K+L KS +V
Sbjct: 237 IVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASV 270

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 200 PVARPDPEVVAML-TSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTV 257
           P   P P  ++ L  +G+TA  AL   G P +G+ V+++ AAG  G  A Q+A+L G  V
Sbjct: 118 PSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRV 177
Query: 258 VATCGGEHKAQ-LLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKA 316
           V   GG  K + L++ELG D  I+YK ED+    K E PKG D+ +++VGG++ +  L  
Sbjct: 178 VGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTR 237
Query: 317 LAVYGRLIVIGMISQYQGEHGWQ-PSNY 343
           +A   R+++ G ISQY  +   + P+NY
Sbjct: 238 IAFKARIVLCGAISQYNNKEAVRGPANY 265

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E 272
           G+TA     E   P  G+ V V+AA+G  GQ   Q AK+ G  VV + G + K  LLK +
Sbjct: 138 GMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSK 197
Query: 273 LGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ 331
            G D   NYK E D+    K  FP G DI +E+VGG M +  L  + +YGR+ V GMISQ
Sbjct: 198 FGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQ 257
Query: 332 YQGEH 336
           Y  E 
Sbjct: 258 YNLEQ 262

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E 272
           G+TA     E   P  G+ V V+AA+G  GQ   QLAK+ G  VV + G + K  LLK +
Sbjct: 140 GMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK 199
Query: 273 LGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ 331
            G D   NYK E D+    K  FP G DI +E+VGG M +  L  + ++GR+ V GMISQ
Sbjct: 200 FGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQ 259
Query: 332 YQGEH 336
           Y  E+
Sbjct: 260 YNLEN 264

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 103/227 (45%), Gaps = 18/227 (7%)
Query: 112 LPIK-PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDA----GFEAVGLIAAV 166
           LP+     VLV+    GVN  D+    G Y           P DA    G E  G I  V
Sbjct: 50  LPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP---------PKDASPILGLELSGEIVGV 100
Query: 167 GDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPDPEV--VAMLTSGLTASIALE 223
           G  V+   VG     +   G+YAE+ ++P+  ILP  +    V   A+  +  T    L 
Sbjct: 101 GPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLF 160
Query: 224 Q-AGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK 282
           Q AG   G+ VL+     G G  A+QLA+  G  V AT G   K +  + LG  R INY+
Sbjct: 161 QXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYR 220
Query: 283 AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMI 329
           +ED   V K E  +G DII + +G   F   + +LA  G L +I  +
Sbjct: 221 SEDFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFL 267

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 104/225 (46%), Gaps = 15/225 (6%)
Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
           I    +L+K  + GVN  +  F  G Y  +        P+  G EA G + A G  V N 
Sbjct: 33  ISEEELLIKNKYTGVNYIESYFRKGIYPCEK-------PYVLGREASGTVVAKGKGVTNF 85
Query: 174 KVGTPAAIMTFGSYAEFTMVPSK---HILPVARPDPEV---VAMLTSGLTA-SIALEQAG 226
           +VG   A ++  ++A+++ + S+     LP    D E+    A L   LTA S   E   
Sbjct: 86  EVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYH 145
Query: 227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI 286
              G  VL+ AAAGG G    QL K+ G   +A    + K ++ KE G + +IN   EDI
Sbjct: 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDI 205
Query: 287 -KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
            + V K    KG D  ++SVG D F + L AL   G  +  G  S
Sbjct: 206 LRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 98  NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGF 157
           NF    +KV +P      P  V ++    GVN  D    +G        +    P   GF
Sbjct: 15  NFVWEEVKVGSP-----GPGQVRLRNTAIGVNFLDTYHRAGIPHPL---VVGEPPIVVGF 66
Query: 158 EAVGLIAAVGDSVNNVKVG--TPAAIMTFGSYAEFTMVPSKHILPVARP----DPEVVAM 211
           EA  ++  VG  V +  VG      +   G+Y++  + P++ ++ V +     D  +  +
Sbjct: 67  EAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGL 126
Query: 212 LTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL 270
           +  G+TA   L Q      G  VL+ AAAGG G   V  A+  G TV+ T   E KA+  
Sbjct: 127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA 186
Query: 271 KELGVDRVINYKAEDIKTVFKE-EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMI 329
           ++LG    INY  +D   V +E    KG D++Y+S+G D     L  L   G     G  
Sbjct: 187 RKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHA 246
Query: 330 S 330
           S
Sbjct: 247 S 247

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 12/221 (5%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  V+V+    G+N  D  + SG Y +        LP   G E  G++ AVGD V   KV
Sbjct: 28  PQAVVVRNKAIGLNFIDTYYRSGLYPA------PFLPSGLGAEGAGVVEAVGDEVTRFKV 81
Query: 176 GTPAAIMT--FGSYAEFTMVPSKHILPVARPDP--EVVAMLTSGLTASIALEQAGPAS-G 230
           G   A  T   G+Y+E  ++P  +++ +A      +  A++  GLT    L Q      G
Sbjct: 82  GDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPG 141
Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI-KTV 289
           + +L  AAAGG G  A Q AK  G  ++ T     KA   K LG    I+Y  ED+ K V
Sbjct: 142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRV 201
Query: 290 FKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
            +    K   ++Y+ VG D +   L ++A  G ++  G  S
Sbjct: 202 LELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
           + N  L+K+  A +N  D    +G  F     + + LP   G++  G +  +G  VNNV 
Sbjct: 32  RKNQXLIKVHAASLNPIDYKTRNGSGFV-AKKLKNNLPSGLGYDFSGEVIELGSDVNNVN 90
Query: 175 VGTPA-AIMTF----GSYAEFTMVPSKHILPVARPDP--EVVAMLTSGLTASIALEQAGP 227
           +G     I  F      YAE+       I+         +  ++ T+GLTA  AL QA  
Sbjct: 91  IGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEV 150
Query: 228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
             G  VL+ A AGG G  A+QLAK  G TV+ T    + A  LK LG ++ INY  ED  
Sbjct: 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHA-FLKALGAEQCINYHEED-- 207
Query: 288 TVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
             F        D + + VGGD+    +  L   G ++ +  I+
Sbjct: 208 --FLLAISTPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTIT 248

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL 273
           GLTA   L E  G   G+ V+V AAAG  G    Q+AKL G  VV   G + K   L++L
Sbjct: 125 GLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKL 184
Query: 274 GVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY 332
           G D V NYK  E ++   K+  P G+D  +++VGG+  N  +  +  +GR+ + G IS Y
Sbjct: 185 GFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY 244
Query: 333 Q 333
Sbjct: 245 N 245

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL 273
           GLTA   L E  G   G+ V+V AAAG  G    Q+AKL G  VV   G + K   L++L
Sbjct: 146 GLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKL 205
Query: 274 GVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY 332
           G D V NYK  E ++   K+  P G+D  +++VGG+  N  +  +  +GR+ + G IS Y
Sbjct: 206 GFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY 265
Query: 333 Q 333
Sbjct: 266 N 266

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 215 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL 273
           GLTA   L E  G   G+ VLV+AAAG  G    Q+AKL G  VV   G + K   LK++
Sbjct: 130 GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI 189
Query: 274 GVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY 332
           G D   NYK    ++   K+  P G+D  +++VGG+  N  L  +  +G++ + G IS Y
Sbjct: 190 GFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVY 249

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 27/231 (11%)
Query: 100 RDATIKVRAPLRLPI--KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDI---------- 147
           ++  ++    + +PI   PN V+VK+  A VN  DVN  SG Y +   ++          
Sbjct: 32  KNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSG-YGATALNMKRDPLHVKIK 90
Query: 148 GSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP--AAIMTF--GSYAEFTMVPSKHIL--PV 201
           G   P   G +  G++   G  V   K G    AA+  +  G+ +EF +V    +   P 
Sbjct: 91  GEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPK 150
Query: 202 ARPDPEVVAMLTSGLTASIALEQAG-----PASGKKVLVTAAAGGTGQFAVQLAKLAGNT 256
           +    +  ++    LTA  A+ + G       +GK+VL+  A+GG G FA+Q+ K     
Sbjct: 151 SLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAH 210
Query: 257 VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG 307
           V A C  +  ++L+++LG D VI+YK+  ++   K   P  FD I ++VGG
Sbjct: 211 VTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKP--FDFILDNVGG 258

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 22/236 (9%)
Query: 104 IKVRAPLRLPIKPNH-VLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR---LPFDAGFEA 159
           +K+R+ + +PI  +H VL+K+   GVN  +    SG Y        SR   LP+  G + 
Sbjct: 44  LKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY--------SRKPLLPYTPGSDV 95
Query: 160 VGLIAAVGDSVNNVKVG----TPAAIMTFGSYAEFTMVPSKHI--LPVARPDPEVVAMLT 213
            G+I AVGD+ +  K G    T + I   G YAE+ +     +  LP      +  A+  
Sbjct: 96  AGVIEAVGDNASAFKKGDRVFTSSTIS--GGYAEYALAADHTVYKLPEKLDFKQGAAIGI 153
Query: 214 SGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE 272
              TA  AL   A   +G+ VLV  A+GG G  A Q+A+  G  ++ T G E   +++ +
Sbjct: 154 PYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213
Query: 273 LGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
            G   V N++  + I  + K    KG DII E +     +  L  L+  GR+IV+G
Sbjct: 214 NGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 59/275 (21%)
Query: 104 IKVRAPLRL---PI---KPNHVLVKIIFAGVNASDVNFSSGRYFSDGN-----DIGSRLP 152
           +++  PL+L   PI   K + VL+KI  AGV  SDV+   GR+   GN     D+G +LP
Sbjct: 7   VEIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRF---GNLRIVEDLGVKLP 63
Query: 153 FDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF---------------------------- 184
              G E  G I  VGD V     G   A+  +                            
Sbjct: 64  VTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYD 123
Query: 185 GSYAEFTMVPS-KHILPVARPDPEVVAMLT-SGLTASIALEQAGPASGKKVLVTAAAGGT 242
           G+YAE+ +VP  K++  + R      A LT SG+T   A+ +A     K ++V  A GG 
Sbjct: 124 GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGL 183
Query: 243 GQFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDI 300
           G  A+Q+AK ++G T++     E   +  K  G D VIN  ++D +  + +    KG D 
Sbjct: 184 GTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADA 243
Query: 301 IYESVGGDMFNLCLKALAVY-------GRLIVIGM 328
           + +       N   K L++Y       G+ +++G+
Sbjct: 244 VID------LNNSEKTLSIYPYVLAKQGKYVMVGL 272

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 201 VARPDPEVV---------AMLTSGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQ 248
           + + DP++V         A+   GLT+ I +++ G     S K ++V+ AAG  G  A Q
Sbjct: 120 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ 179
Query: 249 LAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG 306
           +    G + VV  CG   K  LL  ELG D  INYK +++    +E  P G D+ +++VG
Sbjct: 180 IGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVG 239
Query: 307 GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGL 346
           G++ +  +  +     +I+ G ISQY  +  + P   P +
Sbjct: 240 GNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAI 279

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 201 VARPDPEVV---------AMLTSGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQ 248
           + + DP++V         A+   GLT+ I +++ G     S K ++V+ AAG  G  A Q
Sbjct: 115 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ 174
Query: 249 LAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG 306
           +    G + VV  CG   K  LL  ELG D  INYK +++    +E  P G D+ +++VG
Sbjct: 175 IGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVG 234
Query: 307 GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGL 346
           G++ +  +  +     +I+ G ISQY  +  + P   P +
Sbjct: 235 GNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAI 274

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 111/277 (40%), Gaps = 42/277 (15%)
Query: 83  LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFS 142
           LP++ +  VVH      R   +KV  P      P  VLVKI  +GV  +D++ + G +  
Sbjct: 3   LPQTMKAAVVHAYGAPLRIEEVKVPLP-----GPGQVLVKIEASGVCHTDLHAAEGDW-- 55
Query: 143 DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------------------ 184
               +   LPF  G E VG +AAVG  V  VK G    I                     
Sbjct: 56  ---PVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC 112
Query: 185 -----------GSYAEFTMVPSKH--ILPVARPDPEVVAMLTSGLTASIALEQAGPASGK 231
                      G YAE+ +    +  ILP      E+  +L +G+T    L+Q     G+
Sbjct: 113 ESQQNTGYSVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQ 172
Query: 232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFK 291
            V ++   GG G  AVQ A+  G  V A    + K +L ++LG    +N + ED     +
Sbjct: 173 WVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQ 231
Query: 292 EEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
            +      ++  +V    F   +      G + ++G+
Sbjct: 232 RDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGL 268

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 14/223 (6%)
Query: 113 PIKP--NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV 170
           P  P  N + V+    G+N  D    SG Y          LP   G EA G+++ VG  V
Sbjct: 23  PADPAENEIQVENKAIGINFIDTYIRSGLYPPPS------LPSGLGTEAAGIVSKVGSGV 76
Query: 171 NNVKVGTPA--AIMTFGSYAEFTMVPSKH--ILPVARPDPEVVAMLTSGLTASIALEQAG 226
            ++K G     A    G+Y+    + +    ILP A    +  A    GLT    L +  
Sbjct: 77  KHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTY 136
Query: 227 PAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAED 285
                ++ L  AAAGG G  A Q AK  G  ++ T G   KAQ   + G  +VINY+ ED
Sbjct: 137 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREED 196
Query: 286 IKTVFKE-EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           +    KE    K   ++Y+SVG D +   L  L   G ++  G
Sbjct: 197 LVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 239

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 185 GSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTA-SIALEQAGPASGKKVLVTAAA 239
           G+YAE+ ++P  ++ P  +P      E  A+  + LTA  + +++ G   G  VLV AA 
Sbjct: 119 GTYAEYVVLPEANLAP--KPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAG 176
Query: 240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI-KTVFKEEFPKGF 298
            G    A+Q+AKL G  V+AT G E K +  K LG D  +NY   D  K V +    KG 
Sbjct: 177 SGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGA 236
Query: 299 DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQG 334
           D + +  G   F   +KA A  GR+ + G  S Y+G
Sbjct: 237 DKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEG 272

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 201 VARPDPEVV---------AMLTSGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQ 248
           + + DP++V         A+   GLT+ I +++ G     S + ++V+ AAG  G  A Q
Sbjct: 116 LEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQ 175
Query: 249 LAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG 306
           +  L G + VV  CG + K   L  ELG D  +NYK  ++    +E  P G D+ +++VG
Sbjct: 176 IGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG 235
Query: 307 GDMFNLCLKALAVYGRLIVIGMISQYQGE 335
           GD+ N  +  +     +I+ G ISQY  +
Sbjct: 236 GDISNAVISQMNENSHIILCGQISQYSND 264

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 201 VARPDPEVV---------AMLTSGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQ 248
           + + DP++V         A+   GLT+ I +++ G     S +  +V+ AAG  G  A Q
Sbjct: 126 LEKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQ 185
Query: 249 LAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG 306
           +  L G + VV  CG + K   L  ELG D  +NYK  ++    +E  P G D+ +++VG
Sbjct: 186 IGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG 245
Query: 307 GDMFNLCLKALAVYGRLIVIGMISQY 332
           GD+ N  +        +I+ G ISQY
Sbjct: 246 GDISNTVISQXNENSHIILCGQISQY 271

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 118 HVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVG 176
            VL+K+  + +N +D+    G+Y  D     S +    G EA G +A +G     + K+G
Sbjct: 51  EVLLKVAASALNRADLMQRQGQY--DPPPGASNI---LGLEASGHVAELGPGCQGHWKIG 105
Query: 177 -TPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGPA-SG 230
            T  A++  G  A++  VP   ++P+  P+     +  A+  + LTA   L   G   +G
Sbjct: 106 DTAMALLPGGGQAQYVTVPEGLLMPI--PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAG 163
Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI-KTV 289
             VL+ A   G G  A+QL ++AG   + T G + K Q+ ++LG     NYK ED  +  
Sbjct: 164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEAT 223
Query: 290 FKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMI 329
            K     G ++I + +GG  +   +  LA+ GR ++ G++
Sbjct: 224 LKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 263

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 118 HVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVG 176
            VL+K+  + +N +D+    G+Y  D     S +    G EA G +A +G     + K+G
Sbjct: 35  EVLLKVAASALNRADLMQRQGQY--DPPPGASNI---LGLEASGHVAELGPGCQGHWKIG 89
Query: 177 -TPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGPA-SG 230
            T  A++  G  A++  VP   ++P+  P+     +  A+  + LTA   L   G   +G
Sbjct: 90  DTAMALLPGGGQAQYVTVPEGLLMPI--PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAG 147
Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI-KTV 289
             VL+ A   G G  A+QL ++AG   + T G + K Q+ ++LG     NYK ED  +  
Sbjct: 148 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEAT 207
Query: 290 FKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMI 329
            K     G ++I + +GG  +   +  LA+ GR ++ G++
Sbjct: 208 LKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLM 247

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 45/281 (16%)
Query: 82  QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYF 141
            +PE+ + ++ +  +       I V  P     K N +L+ + ++GV  +D++   G + 
Sbjct: 1   SIPETQKGVIFYESHGKLEYKDIPVPKP-----KANELLINVKYSGVCHTDLHAWHGDW- 54
Query: 142 SDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIM------------------- 182
                +  +LP   G E  G++  +G++V   K+G  A I                    
Sbjct: 55  ----PLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESN 110
Query: 183 -------------TFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPAS 229
                        +F  YA    V + HI P      +V  +L +G+T   AL+ A   +
Sbjct: 111 CPHADLSGYTHDGSFQQYATADAVQAAHI-PQGTDLAQVAPILCAGITVYKALKSANLMA 169
Query: 230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAED--IK 287
           G  V ++ AAGG G  AVQ AK  G  V+   GGE K +L + +G +  I++  E   + 
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVG 229
Query: 288 TVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
            V K        +I  SV         + +   G  +++GM
Sbjct: 230 AVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 41/258 (15%)
Query: 104 IKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI 163
           +K++   +  I    VLV+I   GV  +D++ + G +      +  +LP   G E VG++
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW-----PVKPKLPLIPGHEGVGIV 67
Query: 164 AAVGDSVNNVKVGTPAAIMTF-----------------------------GSYAEFTMVP 194
             VG  V ++KVG    I                                G YAE+    
Sbjct: 68  EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 195 SKHILPVARPD----PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLA 250
           + +++ +  PD     E   +  +G+T   AL+  G   G+ V +    GG G  AVQ A
Sbjct: 128 ADYVVKI--PDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGI-GGLGHVAVQYA 184
Query: 251 KLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF 310
           K  G  VVA   G+ K +L KELG D V+N   ED     KE+       +  +V    F
Sbjct: 185 KAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAF 244
Query: 311 NLCLKALAVYGRLIVIGM 328
                ++   G  +++G+
Sbjct: 245 QSAYNSIRRGGACVLVGL 262

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 41/258 (15%)
Query: 104 IKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI 163
           +K++   +  I    VLV+I   GV  +D++ + G +      +  +LP   G E VG++
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW-----PVKPKLPLIPGHEGVGIV 67
Query: 164 AAVGDSVNNVKVGTPAAIMTF-----------------------------GSYAEFTMVP 194
             VG  V ++KVG    I                                G YAE+    
Sbjct: 68  EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 195 SKHILPVARPD----PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLA 250
           + +++ +  PD     E   +  +G+T   AL+  G   G+ V +    GG G  AVQ A
Sbjct: 128 ADYVVKI--PDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGI-GGFGHVAVQYA 184
Query: 251 KLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF 310
           K  G  VVA   G+ K +L KELG D V+N   ED     KE+       +  +V    F
Sbjct: 185 KAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAF 244
Query: 311 NLCLKALAVYGRLIVIGM 328
                ++   G  +++G+
Sbjct: 245 QSAYNSIRRGGACVLVGL 262

>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase (Mll3093) From Mesorhizobium Loti At 1.71 A Resolution Length = 349

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGD-----SV 170
           P+ VL+K+  A +N SDV F  G+Y   G       P  AGFE VG I A GD     S+
Sbjct: 49  PSQVLIKVNLASINPSDVAFIKGQY---GQPRVKGRP--AGFEGVGTIVAGGDEPYAKSL 103
Query: 171 NNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPA 228
              +V     +  +GS+AE+ +  +   +P+     D +  A + + LTA    +     
Sbjct: 104 VGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAXIVNPLTAIAXFDIVKQE 163
Query: 229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAED--- 285
             K  + TA A    +  + LAK  G   + T   + +  LLK++G   V+N KA D   
Sbjct: 164 GEKAFVXTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEA 223
Query: 286 -IKTVFKEEFPKGF-DIIYESVGGDMFNLCLK--ALAVYGRL 323
            ++ V K E P+ F D +   +   +FN   K     +YGRL
Sbjct: 224 TLREVXKAEQPRIFLDAVTGPLASAIFNAXPKRARWIIYGRL 265

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           PN V+V +  AGV   D   + G Y      +    PF  G E  G++ +  +  + +K 
Sbjct: 48  PNVVVVDVKAAGVCFPDYLMTKGEY-----QLKMEPPFVPGIETAGVVRSAPEG-SGIKP 101
Query: 176 GTPAAIMTF-GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGK 231
           G       F G YAE   V   +ILP      D E VA++ +  T   A  + G   +G+
Sbjct: 102 GDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGE 161
Query: 232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFK 291
            VLV  AAGG G  A+Q+AK  G  V+A        + +K +G D V+  +    K V +
Sbjct: 162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVRE 221
Query: 292 EEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
                G D++ + +GG  F+  ++ LA  GRL+V+G
Sbjct: 222 ATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVG 257

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 93/232 (40%), Gaps = 28/232 (12%)
Query: 130 ASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG------------- 176
           A  +N+        G  +    PF    +  G++ AVG SV   + G             
Sbjct: 62  AVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDRVISTFAPGWLD 121
Query: 177 --------TPAAIMTFGSY----AEFTMVPSKHIL--PVARPDPEVVAMLTSGLTASIAL 222
                   TPA     G++    +E+ ++P    +  P +    E   +  +GLTA  AL
Sbjct: 122 GLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFAL 181
Query: 223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK 282
            + G       +V    GG   F +Q+AK  G  V+ T     K      LG D  IN  
Sbjct: 182 VEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRL 241
Query: 283 AED-IKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQ 333
            ED ++ V+     +G D I E  GG      LKA+A  GR+ VIG++  ++
Sbjct: 242 EEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFE 293

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 41/249 (16%)
Query: 118 HVLVKIIFAGVNASDVNFSSGRYFSDGN-----DIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            VL+K+  AGV  SDV+   GR+   GN     D+G +LP   G E  G I  VGD V  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRF---GNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 173 VKVGTPAAIMTF----------------------------GSYAEFTMVPS-KHILPVAR 203
              G   A+  +                            G+YAE+ +VP  K++  + R
Sbjct: 84  YSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRR 143
Query: 204 PDPEVVAMLT-SGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATC 261
            +    A LT SG+T   A+ +A     K +LV  A GG G  AVQ+AK ++G T++   
Sbjct: 144 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 203
Query: 262 GGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYE-SVGGDMFNLCLKALAV 319
             E   +  K  G D VIN   +D +  + +    KG D + + +      ++  KALA 
Sbjct: 204 VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAK 263
Query: 320 YGRLIVIGM 328
            G+ +++G+
Sbjct: 264 QGKYVMVGL 272

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 41/249 (16%)
Query: 118 HVLVKIIFAGVNASDVNFSSGRYFSDGN-----DIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            VL+K+  AGV  SDV+   GR+   GN     D+G +LP   G E  G I  VGD V  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRF---GNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 173 VKVGTPAAIMTF----------------------------GSYAEFTMVPS-KHILPVAR 203
              G   A+  +                            G+YAE+ +VP  K++  + R
Sbjct: 84  YSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRR 143
Query: 204 PDPEVVAMLT-SGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATC 261
            +    A LT SG+T   A+ +A     K +LV  A GG G  AVQ+AK ++G T++   
Sbjct: 144 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 203
Query: 262 GGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAV 319
             E   +  K  G D VIN   +D +  + +    KG D + +    +   ++  KALA 
Sbjct: 204 VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 263
Query: 320 YGRLIVIGM 328
            G+ +++G+
Sbjct: 264 QGKYVMVGL 272

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 41/249 (16%)
Query: 118 HVLVKIIFAGVNASDVNFSSGRYFSDGN-----DIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            VL+K+  AGV  SDV+   GR+   GN     D+G +LP   G E  G I  VGD V  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRF---GNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 173 VKVGTPAAIMTF----------------------------GSYAEFTMVPS-KHILPVAR 203
              G   A+                               G+YAE+ +VP  K++  + R
Sbjct: 84  YSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRR 143
Query: 204 PDPEVVAMLT-SGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATC 261
            +    A LT SG+T   A+ +A     K +LV  A GG G  AVQ+AK ++G T++   
Sbjct: 144 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 203
Query: 262 GGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYE-SVGGDMFNLCLKALAV 319
             E   +  K  G D VIN   +D +  + +    KG D + + +      ++  KALA 
Sbjct: 204 VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSVYPKALAK 263
Query: 320 YGRLIVIGM 328
            G+ +++G+
Sbjct: 264 QGKYVMVGL 272

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 10/214 (4%)
Query: 128 VNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPA-AIMTFGS 186
           V A  +NF          D   + P   GFE  G++ A+GDSV   ++G    A + + +
Sbjct: 37  VKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA 96
Query: 187 YAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGG 241
           +AE    P + +  +  PD     E  A   + +TA + L E A    G  VLV +A GG
Sbjct: 97  WAEVVCTPVEFVYKI--PDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGG 154
Query: 242 TGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDII 301
            GQ   QL     N  V       K + +K+  V  + +  A+ ++ V K    +G DI+
Sbjct: 155 VGQAVAQLCSTVPNVTVFGTASTFKHEAIKD-SVTHLFDRNADYVQEV-KRISAEGVDIV 212
Query: 302 YESVGGDMFNLCLKALAVYGRLIVIGMISQYQGE 335
            + + GD     L  L   G  I+ G  +   GE
Sbjct: 213 LDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGE 246

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 39/246 (15%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRL--PFDAGFEAVGLIAAVGDSVNNV 173
           P  VL+K++   +  +D++      ++      SR+  P   G E  G +  +G  V  +
Sbjct: 28  PGEVLIKVLATSICGTDLHIYEWNEWAQ-----SRIKPPQIXGHEVAGEVVEIGPGVEGI 82
Query: 174 KVGTPAAIMTF----------------------------GSYAEFTMVPSKHILPVARPD 205
           +VG   ++ T                             G +AE+ +VP+++I    +  
Sbjct: 83  EVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSI 142
Query: 206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGE 264
           P   A L   L  ++    AGP SGK VL+T  AG  G   + +AK +G   V+ +   +
Sbjct: 143 PPEYATLQEPLGNAVDTVLAGPISGKSVLIT-GAGPLGLLGIAVAKASGAYPVIVSEPSD 201
Query: 265 HKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGR 322
            + +L K++G D VIN   ED +K V       G D+  E  G        L+A+   GR
Sbjct: 202 FRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGR 261
Query: 323 LIVIGM 328
           + ++G+
Sbjct: 262 VSLLGL 267

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 39/246 (15%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRL--PFDAGFEAVGLIAAVGDSVNNV 173
           P  VL+K++   +  +D++      ++      SR+  P   G E  G +  +G  V  +
Sbjct: 29  PGEVLIKVLATSICGTDLHIYEWNEWAQ-----SRIKPPQIXGHEVAGEVVEIGPGVEGI 83
Query: 174 KVGTPAAIMTF----------------------------GSYAEFTMVPSKHILPVARPD 205
           +VG   ++ T                             G +AE+ +VP+++I    +  
Sbjct: 84  EVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSI 143
Query: 206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGE 264
           P   A L   L  ++    AGP SGK VL+T  AG  G   + +AK +G   V+ +   +
Sbjct: 144 PPEYATLQEPLGNAVDTVLAGPISGKSVLIT-GAGPLGLLGIAVAKASGAYPVIVSEPSD 202
Query: 265 HKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGR 322
            + +L K++G D VIN   ED +K V       G D+  E  G        L+A+   GR
Sbjct: 203 FRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGR 262
Query: 323 LIVIGM 328
           + ++G+
Sbjct: 263 VSLLGL 268

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
           K + +LVKI    VN  D   +  R      D+ S+ P   GF+A+G++ +VG+ V    
Sbjct: 31  KVHEILVKIQSISVNPVD---TKQRLM----DV-SKAPRVLGFDAIGVVESVGNEVTMFN 82
Query: 175 VGT----PAAIMTFGSYAEFTMVPSKHIL--PVARPDPEVVAMLTSGLTASIAL------ 222
            G       +    GS AE+ ++  + +   P      + V++  +G+TA   L      
Sbjct: 83  QGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGI 142
Query: 223 -EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY 281
                   GK +L+   AGG G  A Q+AK  G  V+ T       +  K++G D V+N+
Sbjct: 143 SRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNH 202
Query: 282 KAEDIKTVFKEEFPKGFDIIYESVGGDMF 310
           K E +   FK +  +  D ++ +   DM+
Sbjct: 203 K-ESLLNQFKTQGIELVDYVFCTFNTDMY 230

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 45/254 (17%)
Query: 119 VLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP 178
           V+V+I  AGV  +D++   G +      +  +LP+  G E VG I  V + V  ++ G P
Sbjct: 44  VIVRIAGAGVCHTDLHLVQGMWH---ELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDP 100
Query: 179 AAI----------------------MTF------GSYAEFTMVPSKHILPVARPDP---- 206
             +                      + F      G +AEF     + ++ + +       
Sbjct: 101 VILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKL 160
Query: 207 -EVVAMLTSGLTASIALEQAGPA--SGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCG 262
            E+  +  +G+TA  A+++A      G  V +    GG G  AVQL K +   TV+A   
Sbjct: 161 VEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV 219
Query: 263 GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYG 321
            E K +L + LG D V++ + + +K V +    +G ++  + VG     +     L   G
Sbjct: 220 KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMG 279
Query: 322 RLIVIGMISQYQGE 335
           RLI++G    Y GE
Sbjct: 280 RLIIVG----YGGE 289

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 41/249 (16%)
Query: 118 HVLVKIIFAGVNASDVNFSSGRYFSDGN-----DIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            VL+K+  AGV  SDV+   GR+   GN     D+G +LP   G E  G I  VGD V  
Sbjct: 27  QVLIKVEAAGVCHSDVHXRQGRF---GNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 173 VKVGTPAAIMTF----------------------------GSYAEFTMVPS-KHILPVAR 203
              G   A+  +                            G+YAE+ +VP  K+   + R
Sbjct: 84  YSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYXYKLRR 143
Query: 204 PDPEVVAMLT-SGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATC 261
            +    A LT SG+T   A+ +A     K +LV  A GG G  AVQ+AK ++G T++   
Sbjct: 144 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGATIIGVD 203
Query: 262 GGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAV 319
             E   +  K  G D VIN   +D +  + +    KG D + +    +   ++  KALA 
Sbjct: 204 VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 263
Query: 320 YGRLIVIGM 328
            G+ + +G+
Sbjct: 264 QGKYVXVGL 272

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 199 LPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTV 257
           +P    D E      + LTA  +L + G  S G++VL+ +A GG G  AV +AK+ G  +
Sbjct: 7   IPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARI 66
Query: 258 VATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK-----GFDIIYESVGGDMFNL 312
             T G + K ++L  LGV+ V + ++ D    F +E  +     G D++  S+ G+    
Sbjct: 67  YTTAGSDAKREMLSRLGVEYVGDSRSVD----FADEILELTDGYGVDVVLNSLAGEAIQR 122
Query: 313 CLKALAVYGRLIVIGMISQY 332
            ++ LA  GR I +G    Y
Sbjct: 123 GVQILAPGGRFIELGKKDVY 142

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 32/260 (12%)
Query: 86  SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN 145
           +F+  VV+     F  A ++  +   LP     VLV++ ++ VN  D   S      DG 
Sbjct: 3   AFQAFVVNKTETEF-TAGVQTISXDDLP--EGDVLVRVHYSSVNYKDGLAS----IPDGK 55
Query: 146 DIGSRLPFDAGFEAVGLIAAV-------GDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHI 198
            + +  PF  G +  G++ +        GD V  +  G    +  FG Y+E+  +  + +
Sbjct: 56  IVKT-XPFVPGIDLAGVVVSSQHPRFREGDEV--IATGYEIGVTHFGGYSEYARLHGEWL 112
Query: 199 LPVAR--PDPEVVAMLTSGLTASIA---LEQAG--PASGKKVLVTAAAGGTGQFAVQLAK 251
           +P+ +     E  A+ T+G TA+++   LE+ G  P  G  VLVT A GG G  AV    
Sbjct: 113 VPLPKGLTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLAVSXLA 171
Query: 252 LAGNTVVATCGGEHKAQLLKELGVDRVI---NYKAEDIKTVFKEEFPKGFDIIYESVGGD 308
             G TV A+ G   +   L+ LG   V+   +  AE I+ + K+ +    D     VGG 
Sbjct: 172 KRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVXAERIRPLDKQRWAAAVD----PVGGR 227
Query: 309 MFNLCLKALAVYGRLIVIGM 328
                L      G + V G+
Sbjct: 228 TLATVLSRXRYGGAVAVSGL 247

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 16/229 (6%)
Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFD--AGFEAVGLIAAVGDSV 170
           P+K N V V+++   +N SD+   +G Y         R+P     G+E VG++  VG  V
Sbjct: 29  PLKDNEVFVRMLVRPINPSDLIPITGAY-------AHRIPLPNIPGYEGVGIVENVGAFV 81
Query: 171 NNVKVGTPA-AIMTFGSYAEFTMVPSKHILPVARPDPEVVA--MLTSGLTASIALEQAGP 227
           +   +G     +   G++ E+    +  ++P+     +  A  M  + LTA +   +   
Sbjct: 82  SRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLN 141
Query: 228 ASGKKVLVTAAAGGT-GQFAVQLAKLAGNTVVA-TCGGEHKAQLLKELGVDRVINYKAED 285
                VL+  A G   G    QL+++    ++A T   +H  +LL+ LG   VI+     
Sbjct: 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAYVIDTSTAP 200
Query: 286 I-KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQ 333
           + +TV +     G D   +S+GG   N    +L   G  + IG++S  Q
Sbjct: 201 LYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQ 249

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 41/218 (18%)
Query: 95  LNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFD 154
           + HN       V   LR  IKPN  L+ + + GV  +D++ ++G Y   GN  G+ L   
Sbjct: 6   VRHNPDGYADLVEKELR-AIKPNEALLDMEYCGVCHTDLHVAAGDY---GNKAGTVL--- 58
Query: 155 AGFEAVGLIAAVGDSVNNVKVGTPAAIMTF-----------------------------G 185
            G E +G++  +G  V++++VG   ++  F                             G
Sbjct: 59  -GHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDG 117
Query: 186 SYAEFTMVPSKHILPVARP-DP-EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTG 243
             AE  +V + + + V    DP E  ++  +G+T   A++ +G   G   ++   AGG G
Sbjct: 118 GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIF-GAGGLG 176
Query: 244 QFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVIN 280
             A+Q AK + G  V+A    + K  L K++G D +IN
Sbjct: 177 NLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIIN 214

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 39/249 (15%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRL--PFDAGFEAVGLIAAVGDSVNNV 173
           P  VL+K++   +  +D++      ++      SR+  P   G E  G +  VG  V ++
Sbjct: 29  PGEVLIKVLATSICGTDLHIYEWNEWAQ-----SRIKPPQIMGHEVAGEVVEVGPGVEDL 83
Query: 174 KVGTPAAIMTF----------------------------GSYAEFTMVPSKHILPVARPD 205
           +VG   ++ T                             G +A + +VP+K+     +  
Sbjct: 84  QVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGVFAHYAIVPAKNAWKNPKDM 143
Query: 206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGE 264
           P   A L   L  ++    AGP +G+  L+T  AG  G   + +AK +G   V+ +   E
Sbjct: 144 PPEYAALQEPLGNAVDTVLAGPIAGRSTLIT-GAGPLGLLGIAVAKASGAYPVIVSEPSE 202
Query: 265 HKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGR 322
            + +L K++G D V+N   ED +K V       G ++  E  G        LKA+   GR
Sbjct: 203 FRRKLAKKVGADYVVNPFEEDPVKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPGGR 262
Query: 323 LIVIGMISQ 331
           + ++G+  +
Sbjct: 263 VSLLGLFPR 271

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 37/244 (15%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK- 174
           P  V VKI  +GV  +D++ + G +      +   LPF  G E VG ++AVG  V+ VK 
Sbjct: 27  PGQVQVKIEASGVCHTDLHAADGDW-----PVKPTLPFIPGHEGVGYVSAVGSGVSRVKE 81
Query: 175 ---VGTP-------------------------AAIMTFGSYAEFTMVPSKHI--LPVARP 204
              VG P                               G Y E+ +    ++  LP    
Sbjct: 82  GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVG 141
Query: 205 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE 264
             E+  +L +G+T    L+      G+ V+++   GG G  AVQ A+  G  V A    +
Sbjct: 142 FVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDD 200
Query: 265 HKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
            K  L + LG +  +N +  D     ++E      ++  +V    F+  +  +   G + 
Sbjct: 201 AKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIA 260
Query: 325 VIGM 328
           + G+
Sbjct: 261 LNGL 264

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 51/262 (19%)
Query: 116 PNHVLVKIIFAGVNASDV---NFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P  +L+K+  AG+  SD+   +  + +Y          LP   G E VG +A +G+ V  
Sbjct: 25  PGEILLKVTAAGLCHSDIFVMDMPAAQYAYG-------LPLTLGHEGVGTVAELGEGVTG 77
Query: 173 VKVG---------------------------------TPAAIMTFGSYAEFTMVPS-KHI 198
             VG                                 TP  + + GS AE+ +V S +H+
Sbjct: 78  FGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHL 137
Query: 199 LPVARPDPEVVAMLT-SGLTASIALEQAGPASGK-KVLVTAAAGGTGQFAVQLAK-LAGN 255
           +P+   DP   A LT +GLT   A+ +  P  G     V    GG G   +Q+ + ++  
Sbjct: 138 VPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA 197
Query: 256 TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCL 314
            V+A    + +  L +E+G D  +   A     + +    +G   +++ VG     +   
Sbjct: 198 RVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQ 257
Query: 315 KALAVYGRLIVIGMISQYQGEH 336
           + +AV G + V+G+   + G H
Sbjct: 258 QVVAVDGHISVVGI---HAGAH 276

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 117 NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 176
             V++++   G+N +D     G Y +  +      PF  G E VG++   G         
Sbjct: 26  GEVVLRVEAVGLNFADHLMRLGAYLTRLHP-----PFIPGMEVVGVVE--GRRY------ 72
Query: 177 TPAAIMTFGSYAEFTMVPSKHILPVAR---PDPEVVAMLTSGLTASIALEQAGPASGKKV 233
             AA++  G  AE   VP   +LP+     P+ E  A   S LTA +AL++A    G+KV
Sbjct: 73  --AALVPQGGLAERVAVPKGALLPLPEGLSPE-EAAAFPVSFLTAYLALKRAQARPGEKV 129
Query: 234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE 293
           LV AAAG  G  AVQ+A+  G  V+A      K  L   LG +    Y           E
Sbjct: 130 LVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYA----------E 179
Query: 294 FPK------GFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
            P+      G D++ E V G      L  LA  GRL+ IG
Sbjct: 180 VPERAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 41/218 (18%)
Query: 95  LNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFD 154
           + HN       V   LR  IKPN  L+ + + GV  +D++ ++G +   GN  G+ L   
Sbjct: 6   VRHNPDGYADLVEKELR-AIKPNEALLDMEYCGVCHTDLHVAAGDF---GNKAGTVL--- 58
Query: 155 AGFEAVGLIAAVGDSVNNVKVGTPAAIMTF-----------------------------G 185
            G E +G++  +G  V++++VG   ++  F                             G
Sbjct: 59  -GHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDG 117
Query: 186 SYAEFTMVPSKHILPVARP-DP-EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTG 243
             AE  +V + + + V    DP E  ++  +G+T   A++ +G   G   ++   AGG G
Sbjct: 118 GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIF-GAGGLG 176
Query: 244 QFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVIN 280
             A+Q AK + G  V+A    + K  L K++G D  IN
Sbjct: 177 NLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTIN 214

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 15/218 (6%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P  VLV+I  +G N  D    +G    +       LP   G +  G + AVG  V++ +V
Sbjct: 32  PGQVLVQIEASGTNPLDAKIRAG----EAPHAQQPLPAILGXDLAGTVVAVGPEVDSFRV 87
Query: 176 GTPAAIMT------FGSYAEFTMVPSKHIL--PVARPDPEVVAMLTSGLTASIAL-EQAG 226
           G     +T       G++A+F  V ++ +   P A    +   +    +TA   L ++A 
Sbjct: 88  GDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLVDRAQ 147
Query: 227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI 286
              G+ VL+    GG G  A+Q+A   G  V AT  G    + +++LG    I+   E  
Sbjct: 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGS-DLEYVRDLGATP-IDASREPE 205
Query: 287 KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
               +    +GFD++Y+++GG + +    A+  +G ++
Sbjct: 206 DYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVV 243

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 117 NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG 176
             V++++   G+N +D     G Y +  +      PF  G E VG++   G         
Sbjct: 26  GEVVLRVEAVGLNFADHLMRLGAYLTRLHP-----PFIPGMEVVGVVE--GRRY------ 72
Query: 177 TPAAIMTFGSYAEFTMVPSKHILPVAR---PDPEVVAMLTSGLTASIALEQAGPASGKKV 233
             AA++  G  AE   VP   +LP+     P+ E  A   S LTA +AL++A    G+KV
Sbjct: 73  --AALVPQGGLAERVAVPKGALLPLPEGLSPE-EAAAFPVSFLTAYLALKRAQARPGEKV 129
Query: 234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE 293
           LV AAAG  G  AVQ+A+  G  V+A      K  L   LG +    Y           E
Sbjct: 130 LVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYA----------E 179
Query: 294 FPK------GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQ 333
            P+      G D++ E V G      L  LA  GRL+ I  I   +
Sbjct: 180 VPERAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIAPIPPLR 224

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 183 TFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQ------AGPASGKK 232
            FG  AE  +V S  ++P  +PD     E  A    GL  S A  Q      AG   G  
Sbjct: 177 NFGGLAEIALVKSNQLMP--KPDHLSWEEAAA---PGLVNSTAYRQLVSRNGAGMKQGDN 231
Query: 233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE------DI 286
           VL+  A+GG G +A Q A   G   +       KA++ + +G + +I+  AE      D 
Sbjct: 232 VLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDE 291
Query: 287 KTVFKEEFPKGFDIIYESVGGDMFNLCLK 315
            T   +E+ +    I E  GG+  ++  +
Sbjct: 292 NTQDPKEWKRFGKRIRELTGGEDIDIVFE 320

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 90/246 (36%), Gaps = 59/246 (23%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           PN V ++I + GV  SD++     +       G+  P   G E VG + AVGD V     
Sbjct: 47  PNDVKIEIAYCGVCHSDLHQVRSEW------AGTVYPCVPGHEIVGRVVAVGDQVEKYAP 100
Query: 176 GTPAAI-------------------------------------MTFGSYAEFTMVPSKHI 198
           G    +                                      T G Y++  +V  +++
Sbjct: 101 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYV 160
Query: 199 LPVARPDPEVVA---MLTSGLTASIALE--QAGPASGKKVLVTAAAGGTGQFAVQLAKLA 253
           L +  P  ++ A   +L +G+T    L   QAGP     V+     G  G   ++LA   
Sbjct: 161 LRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMG---IKLAHAM 217
Query: 254 GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG----DM 309
           G  VVA    E K +  K LG D V+N +  D          K FD I  +V      D 
Sbjct: 218 GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL----KSFDFILNTVAAPHNLDD 273
Query: 310 FNLCLK 315
           F   LK
Sbjct: 274 FTTLLK 279

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 45/234 (19%)
Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P+    V + +  AGVN  D   + G Y    +          G E  G++   G  V  
Sbjct: 235 PLGDGEVRIAMRAAGVNFRDALIALGMYPGVAS---------LGSEGAGVVVETGPGVTG 285
Query: 173 VKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSG-------------LTAS 219
           +  G               M+P K   P+A  D  +V  + +G             LTA 
Sbjct: 286 LAPGDRV----------MGMIP-KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAY 334
Query: 220 IAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV 278
            AL + AG   G+ +LV +AAGG G  A+QLA+  G  V AT   E K Q + EL  + +
Sbjct: 335 YALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAV-ELSREHL 392
Query: 279 INYKAEDIKTVFKEEF-----PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
            + +  D    F+++F      +G D++  S+ G+  +  L+ L   GR + +G
Sbjct: 393 ASSRTCD----FEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELG 442

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 31/232 (13%)
Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
           ++ + V VK++ A +N SD+N   G Y      +   LP   G E V  + AVG +V  +
Sbjct: 52  VRGSDVRVKMLAAPINPSDINMIQGNY-----GLLPELPAVGGNEGVAQVVAVGSNVTGL 106
Query: 174 KVG-----TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIA------L 222
           K G       A + T+ + A F    S+  L     D  + +  T G+    A       
Sbjct: 107 KPGDWVIPANAGLGTWRTEAVF----SEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDF 162
Query: 223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG----NTVVATCGGEHKAQLLKELGVDRV 278
           EQ  P  G  V+  A+  G GQ  +Q+A   G    N V      +  +  LK LG + V
Sbjct: 163 EQLQP--GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV 220
Query: 279 IN---YKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           I     +  ++K  FK + P+   +    VGG      L+ LA  G ++  G
Sbjct: 221 ITEEELRRPEMKNFFK-DMPQP-RLALNCVGGKSSTELLRQLARGGTMVTYG 270

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 31/232 (13%)
Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
           ++ + V VK++ A +N SD+N   G Y      +   LP   G E V  + AVG +V  +
Sbjct: 39  VRGSDVRVKMLAAPINPSDINMIQGNY-----GLLPELPAVGGNEGVAQVVAVGSNVTGL 93
Query: 174 KVG-----TPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIA------L 222
           K G       A + T+ + A F    S+  L     D  + +  T G+    A       
Sbjct: 94  KPGDWVIPANAGLGTWRTEAVF----SEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDF 149
Query: 223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG----NTVVATCGGEHKAQLLKELGVDRV 278
           EQ  P  G  V+  A+  G GQ  +Q+A   G    N V      +  +  LK LG + V
Sbjct: 150 EQLQP--GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV 207
Query: 279 IN---YKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           I     +  ++K  FK + P+   +    VGG      L+ LA  G ++  G
Sbjct: 208 ITEEELRRPEMKNFFK-DMPQP-RLALNCVGGKSSTELLRQLARGGTMVTYG 257

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 111/287 (38%), Gaps = 72/287 (25%)
Query: 98  NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGF 157
           +F    +K+R P     + + VLVK++  G+  +D+     +Y          LP   G 
Sbjct: 18  DFELQALKIRQP-----QGDEVLVKVVATGMCHTDLIVRDQKY-------PVPLPAVLGH 65
Query: 158 EAVGLIAAVGDSVNNVKVG-------------------TPAAIMTF-------------- 184
           E  G+I A+G +V  ++VG                    PA    F              
Sbjct: 66  EGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNH 125
Query: 185 -----------------GSYAEFTMVPSKHILPVARPDP-EVVAMLTSGLT----ASIAL 222
                             S+A + +    + + V +  P E++  L  G+     A I  
Sbjct: 126 ALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINA 185
Query: 223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINY 281
            +  PAS     VT  AG  G  A+  AK+ G + ++A    E + +L K+LG   VIN 
Sbjct: 186 LKVTPASS---FVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 242
Query: 282 KAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIG 327
           K +D     KE    G +   ES G  ++    + AL + G++ V+G
Sbjct: 243 KTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 156 GFEAVGLIAAVGDSVNNVKVGT----PAAIMTFGSYAEFTMVPSKHI--LPVARPDPEVV 209
           G++A G+++AVG  V   + G       +I+  G+ AEF +V  + +   P      E  
Sbjct: 86  GYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAA 145
Query: 210 AMLTSGLTA------SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCG 262
           A+  + +TA       + + +  P +   +L+   AGG G  AVQ+A+   + TV+AT  
Sbjct: 146 ALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS 205
Query: 263 GEHKAQLLKELGVDRVINY 281
                + +K LG   VI++
Sbjct: 206 RPETQEWVKSLGAHHVIDH 224

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 184 FGSYAEFTMVPSKHILPVARP-----DPEVVAMLTSGLTASIALEQAGPA--SGKKVLVT 236
           FG  AE+ +V +  +LP  +P     +   V+ L +G    + +   G     G  VL+ 
Sbjct: 170 FGGLAEYGVVRASQLLP--KPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIW 227
Query: 237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK--------AEDIKT 288
            A+GG G +A+Q  K  G   VA      K   ++ LG D VIN          A+D + 
Sbjct: 228 GASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRR 287
Query: 289 VFK----------EEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY 332
           V +          E+  +  DI++E  G   F L +      G ++  G  S Y
Sbjct: 288 VVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGY 341

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 97  HNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAG 156
            N  D ++ V+      +  + VL+K+ ++G+N  D     G     G +I    P   G
Sbjct: 12  KNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKD-----GLAGKAGGNIVREYPLILG 66
Query: 157 FEAVGLIA-------AVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVAR--PDPE 207
            +A G +        A GD V  +       +   G  +E+  VP   ++P+ +     E
Sbjct: 67  IDAAGTVVSSNDPRFAEGDEV--IATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKE 124
Query: 208 VVAMLTSGLTASIA---LEQAG--PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
                T+G TA+++   LEQ G  P  G  VLVT A GG G  AV      G  VVA+ G
Sbjct: 125 AXVYGTAGFTAALSVHRLEQNGLSPEKG-SVLVTGATGGVGGIAVSXLNKRGYDVVASTG 183
Query: 263 GEHKAQLLKELGVDRVINYKAEDI-----KTVFKEEFPKGFDIIYESVGGDMFNLCLKAL 317
               A  LK+LG   VI+   ED+     K + K+++    D     VGG      L  +
Sbjct: 184 NREAADYLKQLGASEVISR--EDVYDGTLKALSKQQWQGAVD----PVGGKQLASLLSKI 237
Query: 318 AVYGRLIVIGM 328
              G + V G+
Sbjct: 238 QYGGSVAVSGL 248

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 105/285 (36%), Gaps = 40/285 (14%)
Query: 77  LNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFS 136
           L    Q P S  K +   +   F         P+  P  P  + V I  +GV  +D++ +
Sbjct: 12  LEAQTQGPGSMAKTMKAAVVRAFGKPLTIDEVPIPQP-GPGQIQVAIQASGVCHTDLHAA 70
Query: 137 SGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------------ 184
            G +    N      PF  G E VG ++AVG  V +VK G    I               
Sbjct: 71  EGDWPVKPNP-----PFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLG 125
Query: 185 -----------------GSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIALEQA 225
                            G +AE+ +     +  LP      E+  +L +G+T    L+  
Sbjct: 126 GWETLCEEQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVT 185
Query: 226 GPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK--A 283
               G  V+++   GG G  AVQ A+  G  V A    + K  L + LG    +N K  A
Sbjct: 186 DTKPGDWVVISGI-GGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTVA 244
Query: 284 EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
           +    + KE       ++  +V    F   L  +A  G + + G+
Sbjct: 245 DPAAYIRKETDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGL 289

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 179 AAIMTFGSYAEFTMVPSKHILPVAR---PDPEVVAMLTSGLTASIALEQAGPASGKKVLV 235
           AA++  G  AE   VP   +LP+     P+ E  A   S LTA +AL++A    G+KVLV
Sbjct: 73  AALVPQGGLAERVAVPKGALLPLPEGLSPE-EAAAFPVSFLTAYLALKRAQARPGEKVLV 131
Query: 236 TAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP 295
            AAAG  G  AVQ+A+  G  V+A      K  L   LG +    Y           E P
Sbjct: 132 QAAAGALGTAAVQVARAXGLRVLAAASRPEKLALPLALGAEEAATYA----------EVP 181
Query: 296 K------GFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           +      G D++ E V G      L  LA  GRL+ IG
Sbjct: 182 ERAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 183 TFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQ------AGPASGKKVLVT 236
            FG  AE  +V +  ++P  +      A    GL  S A  Q      A    G  VL+ 
Sbjct: 195 NFGGLAEIALVKTNQLMPKPKHLTWEEAA-APGLVNSTAYRQLVSRNGAAMKQGDNVLIW 253
Query: 237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-- 294
            A+GG G +A Q A   G   +       KA++ + +G + +I+  AE  K  +K+E   
Sbjct: 254 GASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYK-FWKDEHTQ 312
Query: 295 -PKGF----------------DIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEH 336
            PK +                DI++E  G + F   +      G +      S Y  E+
Sbjct: 313 DPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGYMHEY 371

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 47/216 (21%)
Query: 100 RDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA 159
           +D   K     R  + P  VL+ I++AG+  SD++ S+   + +G       P   G E 
Sbjct: 13  KDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIH-SAYSEWKEG-----IYPMIPGHEI 66
Query: 160 VGLIAAVGDSVNNVKVGTPAAIMTF----------------------------------- 184
            G+I  VG  V   K+G    +  F                                   
Sbjct: 67  AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 185 ---GSYAEFTMVPSKHILPVARPDP--EVVAMLTSGLTASIALEQAGPASGKKVLVTAAA 239
              G Y+   +V   +++ V +  P  +V  +L +G+T    L+ +    G KV V A  
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGV-AGF 185
Query: 240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV 275
           GG G  AV+ A   G  V      EHK Q    +GV
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGV 221

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 116/295 (39%), Gaps = 55/295 (18%)
Query: 81  VQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRY 140
           +  PE FE + + + + ++++       P   P   + + +KI   GV  SD++ ++G +
Sbjct: 1   MSYPEKFEGIAIQS-HEDWKNPKKTKYDPK--PFYDHDIDIKIEACGVCGSDIHCAAGHW 57
Query: 141 FSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN-VKVGTPAAI------------------ 181
              GN    ++P   G E VG +  +G   N+ +KVG    +                  
Sbjct: 58  ---GN---MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNE 111
Query: 182 ------------------MTFGSYAEFTMVPSKHILPVARPDPEVVA--MLTSGLTASIA 221
                             ++ G YA +  V    ++P+    P  +A  +L  GLT    
Sbjct: 112 PYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSP 171
Query: 222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY 281
           L + G   GKKV +    G      +    +   T V +     +   +K +G D  I  
Sbjct: 172 LVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIAT 230
Query: 282 KAEDIKTVFKEEFPKGFDIIY---ESVGGDMFNLCLKALAVYGRLIVIGMISQYQ 333
             E     + E++   FD+I     S+    FN+  KA+ V GR++ I +  Q++
Sbjct: 231 LEE---GDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHE 282

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 213 TSGLTASI---ALEQAG--PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA 267
           T+G TA +   ALE AG  P  G+ ++VT A+GG G  AV L    G  VVA  G E   
Sbjct: 147 TAGFTAMLCVMALEDAGVRPQDGE-IVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 205
Query: 268 QLLKELGVDRVI 279
           + LK LG  RV+
Sbjct: 206 EYLKSLGASRVL 217

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 34/258 (13%)
Query: 88   EKLVVHTLNHNFRDATIKVRAPLR--LPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG- 144
            E   V+ L+     +   V +PL   LP      L  + +  +N  DV  ++G+   D  
Sbjct: 1529 EHAFVNVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSI 1588
Query: 145  ------NDIGSRLPFD----AGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVP 194
                   D    + F     +G   +G++ A G       + T   ++   ++     VP
Sbjct: 1589 PGKWLTRDCMLGMEFSGRDASGRRVMGMVPAEG-------LATSVLLLQHATWE----VP 1637
Query: 195  SKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG 254
            S   L  A   P V    T+   + +   +  P  G+ VL+ + +GG GQ A+ +A   G
Sbjct: 1638 STWTLEEAASVPIVY---TTAYYSLVVRGRMQP--GESVLIHSGSGGVGQAAIAIALSRG 1692
Query: 255  NTVVATCGGEHKAQLLKEL--GVDRVINYKAEDI---KTVFKEEFPKGFDIIYESVGGDM 309
              V  T G   K   L+     +D      + D    + V +    KG D++  S+  + 
Sbjct: 1693 CRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEK 1752
Query: 310  FNLCLKALAVYGRLIVIG 327
                ++ LA +GR + IG
Sbjct: 1753 LQASVRCLAQHGRFLEIG 1770

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 94/252 (37%), Gaps = 42/252 (16%)
Query: 116 PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKV 175
           P+ +LVK+   G+  +D +   G + S         P   G E  G++   G +V ++  
Sbjct: 47  PDDLLVKVEACGICGTDRHLLHGEFPSTP-------PVTLGHEFCGIVVEAGSAVRDIAP 99
Query: 176 GT----------------------------PAAIMTFGSYAEFTMVPSKHILPVARPDPE 207
           G                                I   G +AE+ +VP K    +      
Sbjct: 100 GARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDP 159
Query: 208 VVAMLTSGLTASI-ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEH 265
           V       L   +  ++ +G  +G  V +    G  G   VQLA+LAG  TV+ +     
Sbjct: 160 VHGAFCEPLACCLHGVDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQAT 218
Query: 266 KAQLLKELGVDRVINYKAEDIKTVFKEE---FPKGFDIIYESVG-GDMFNLCLKALAVYG 321
           K +L +E+G    ++  A D+           P G D++ E  G  +      +     G
Sbjct: 219 KRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGG 278
Query: 322 RLIVIGMISQYQ 333
            ++++G++ Q +
Sbjct: 279 TVVILGVLPQGE 290

>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 184 FGSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASI---ALEQAG--PASGKKVLVT 236
           +G  AE   V    +  LP          + T+G TA +   ALE AG  P  G+ V+VT
Sbjct: 95  WGGLAERARVKGDWLVALPAGLSSRNAXIIGTAGFTAXLCVXALEDAGIRPQDGE-VVVT 153
Query: 237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN 280
            A+GG G  AV L    G  V A  G E     LK LG +R+++
Sbjct: 154 GASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILS 197

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	362
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-97
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-58
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-57
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	7e-56
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	8e-56
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	8e-56
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	5e-55
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-53
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-53
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	5e-53
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-51
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	6e-51
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	4e-50
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-47
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	4e-47
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	6e-47
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	6e-47
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-46
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	4e-44
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-41
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-40
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-40
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-39
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-39
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	6e-39
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-38
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	6e-37
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	9e-37
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-36
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	2e-36
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	4e-34
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	1e-30
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-29
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	9e-29
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	4e-28
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	8e-28
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-27
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	7e-26
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	4e-25
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-22
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-22
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-21
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-20
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	4e-20
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	4e-20
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-19
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	5e-19
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-18
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-18
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	9e-17
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-16
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	7e-16
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	8e-16
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-15
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-15
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	7e-15
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	2e-14
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	6e-14
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	3e-12
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	4e-12
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	3e-11
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	2e-10
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-09
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	3e-09
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-08
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	8e-06

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  293 bits (751), Expect = 2e-97
 Identities = 136/282 (48%), Positives = 176/282 (62%), Gaps = 9/282 (3%)

Query: 80  NVQLPESFEKLVVHTLNHNFRDATIKVR-APLRLPIKPNHVLVKIIFAGVNASDVNFSSG 138
           N+      +KLVV  L+ NFR+A    R  P+ LP     +LV+  F GVNASD+N+S+G
Sbjct: 17  NLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAG 75

Query: 139 RYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKH 197
           RY     D   + PFD GFE +G + A+G S +    VG   A M  GS+AE+T+VP+  
Sbjct: 76  RY-----DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASI 130

Query: 198 ILPVARPDPEVVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNT 256
             PV    PE + +L SG TA I+L++ G  + GKKVLVTAAAGGTGQFA+QL+K A   
Sbjct: 131 ATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 190

Query: 257 VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKA 316
           V+ TC  + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + A
Sbjct: 191 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDA 250

Query: 317 LAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVV 358
           LA  GRLIVIG IS YQ   G  P     L  K+L KS +V 
Sbjct: 251 LATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQ 292

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  192 bits (490), Expect = 1e-58
 Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 10/223 (4%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P+K N V V+++   +N SD+   +G Y          LP   G+E VG++  VG  V+ 
Sbjct: 29  PLKDNEVFVRMLVRPINPSDLIPITGAY-----AHRIPLPNIPGYEGVGIVENVGAFVSR 83

Query: 173 VKVGTP-AAIMTFGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGP-A 228
             +G     +   G++ E+    +  ++P+  +  D     M  + LTA +   +     
Sbjct: 84  ELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQ 143

Query: 229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT 288
               +LV A     G    QL+++    ++A        + L  LG   VI+     +  
Sbjct: 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYE 203

Query: 289 VFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
              E     G D   +S+GG   N    +L   G  + IG++S
Sbjct: 204 TVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS 246

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  189 bits (482), Expect = 2e-57
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 13/224 (5%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-NV 173
            P+ VL+K+  A +N SDV F  G+Y              AGFE VG I A GD      
Sbjct: 48  GPSQVLIKVNLASINPSDVAFIKGQY-----GQPRVKGRPAGFEGVGTIVAGGDEPYAKS 102

Query: 174 KVGT----PAAIMTFGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGP 227
            VG        +  +GS+AE+ +  +   +P+     D +  AM+ + LTA    +    
Sbjct: 103 LVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQ 162

Query: 228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
              K  ++TA A    +  + LAK  G   + T   + +  LLK++G   V+N KA D +
Sbjct: 163 EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFE 222

Query: 288 TVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
              +E    +   I  ++V G + +    A+    R I+ G + 
Sbjct: 223 ATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLD 266

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  184 bits (470), Expect = 7e-56
 Identities = 65/227 (28%), Positives = 96/227 (42%), Gaps = 15/227 (6%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  V ++    GVN  D    +G             P   GFEA  ++  VG  V + 
Sbjct: 26  PGPGQVRLRNTAIGVNFLDTYHRAGIPHPLV---VGEPPIVVGFEAAAVVEEVGPGVTDF 82

Query: 174 KVGTP--AAIMTFGSYAEFTMVPSKHILPVARPDP------EVVAMLTSGLTASIALEQA 225
            VG      +   G+Y++  + P++ ++ V  P         +  ++  G+TA   L Q 
Sbjct: 83  TVGERVCTCLPPLGAYSQERLYPAEKLIKV--PKDLDLDDVHLAGLMLKGMTAQYLLHQT 140

Query: 226 GPA-SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE 284
                G  VL+ AAAGG G   V  A+  G TV+ T   E KA+  ++LG    INY  +
Sbjct: 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQ 200

Query: 285 DIKTVFKEEFP-KGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           D   V +E    KG D++Y+S+G D     L  L   G     G  S
Sbjct: 201 DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  184 bits (469), Expect = 8e-56
 Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 12/223 (5%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  V+V+    G+N  D  + SG Y +        LP   G E  G++ AVGD V   
Sbjct: 26  PGPQAVVVRNKAIGLNFIDTYYRSGLYPA------PFLPSGLGAEGAGVVEAVGDEVTRF 79

Query: 174 KVGTPAAIMT--FGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGPA- 228
           KVG   A  T   G+Y+E  ++P  +++ +  +    +  A++  GLT    L Q     
Sbjct: 80  KVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVK 139

Query: 229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT 288
            G+ +L  AAAGG G  A Q AK  G  ++ T     KA   K LG    I+Y  ED+  
Sbjct: 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAK 199

Query: 289 VFKEEFP-KGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
              E    K   ++Y+ VG D +   L ++A  G ++  G  S
Sbjct: 200 RVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  184 bits (470), Expect = 8e-56
 Identities = 66/227 (29%), Positives = 98/227 (43%), Gaps = 19/227 (8%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
           I    +L+K  + GVN  +  F  G Y           P+  G EA G + A G  V N 
Sbjct: 33  ISEEELLIKNKYTGVNYIESYFRKGIY-------PCEKPYVLGREASGTVVAKGKGVTNF 85

Query: 174 KVGTPAAIMTFGSYAEFTMV-PSKHILPVARPD-------PEVVAMLTSGLTASIALEQA 225
           +VG   A ++  ++A+++ +     ++ +  P            A L   LTA     +A
Sbjct: 86  EVGDQVAYISNSTFAQYSKISSQGPVMKL--PKGTSDEELKLYAAGLLQVLTALSFTNEA 143

Query: 226 GPA-SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE 284
                G  VL+ AAAGG G    QL K+ G   +A    + K ++ KE G + +IN   E
Sbjct: 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKE 203

Query: 285 DIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           DI     +    KG D  ++SVG D F + L AL   G  +  G  S
Sbjct: 204 DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  182 bits (464), Expect = 5e-55
 Identities = 64/223 (28%), Positives = 93/223 (41%), Gaps = 12/223 (5%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
              N + V+    G+N  D    SG Y          LP   G EA G+++ VG  V ++
Sbjct: 26  PAENEIQVENKAIGINFIDTYIRSGLYPP------PSLPSGLGTEAAGIVSKVGSGVKHI 79

Query: 174 KVGTPAA--IMTFGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQAGP-A 228
           K G          G+Y+    + +     +  A    +  A    GLT    L +     
Sbjct: 80  KAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIK 139

Query: 229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT 288
             ++ L  AAAGG G  A Q AK  G  ++ T G   KAQ   + G  +VINY+ ED+  
Sbjct: 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVE 199

Query: 289 VFKEEFP-KGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
             KE    K   ++Y+SVG D +   L  L   G ++  G  S
Sbjct: 200 RLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  178 bits (455), Expect = 1e-53
 Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 17/226 (7%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
            + N +L+K+  A +N  D    +G  F     + + LP   G++  G +  +G  VNNV
Sbjct: 31  YRKNQMLIKVHAASLNPIDYKTRNGSGFVAKK-LKNNLPSGLGYDFSGEVIELGSDVNNV 89

Query: 174 KVG-----TPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQ 224
            +G               YAE+       I+     +     +  ++ T+GLTA  AL Q
Sbjct: 90  NIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQK--LEKLSFLQAASLPTAGLTALQALNQ 147

Query: 225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE 284
           A    G  VL+ A AGG G  A+QLAK  G TV+ T    + A  LK LG ++ INY  E
Sbjct: 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHA-FLKALGAEQCINYHEE 206

Query: 285 DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           D    F        D + + VGGD+    +  L   G ++ +  I+
Sbjct: 207 D----FLLAISTPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTIT 248

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  178 bits (455), Expect = 2e-53
 Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 15/222 (6%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
           K + VL+K+   GVN  +    SG Y          LP+  G +  G+I AVGD+ +  K
Sbjct: 56  KDHQVLIKVHACGVNPVETYIRSGTY-----SRKPLLPYTPGSDVAGVIEAVGDNASAFK 110

Query: 175 VGT--PAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIALEQAGPA 228
            G     +    G YAE+ +     +  +  P+     +  A+     TA  AL  +   
Sbjct: 111 KGDRVFTSSTISGGYAEYALAADHTVYKL--PEKLDFKQGAAIGIPYFTAYRALIHSACV 168

Query: 229 -SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
            +G+ VLV  A+GG G  A Q+A+  G  ++ T G E   +++ + G   V N++  +  
Sbjct: 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYI 228

Query: 288 TVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
              K+    KG DII E +     +  L  L+  GR+IV+G 
Sbjct: 229 DKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGS 270

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  177 bits (452), Expect = 5e-53
 Identities = 60/257 (23%), Positives = 101/257 (39%), Gaps = 22/257 (8%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
           +   + +++   G+N  D+    G       D   + P   GFE  G++ A+GDSV   +
Sbjct: 29  QDGELKIRVKACGLNFIDLMVRQGNI-----DNPPKTPLVPGFECSGIVEALGDSVKGYE 83

Query: 175 VGTP-AAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGPA 228
           +G    A + + ++AE    P + +  +  PD     E  A   + +TA + L E A   
Sbjct: 84  IGDRVMAFVNYNAWAEVVCTPVEFVYKI--PDDMSFSEAAAFPMNFVTAYVMLFEVANLR 141

Query: 229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT 288
            G  VLV +A GG GQ   QL     N  V       K + +K+      +  +  D   
Sbjct: 142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTH--LFDRNADYVQ 199

Query: 289 VFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCE 348
             K    +G DI+ + + GD     L  L   G  I+ G  +   GE     S      +
Sbjct: 200 EVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQ 259

Query: 349 -------KILAKSQTVV 358
                  K+  +++ + 
Sbjct: 260 VEKVNPIKLYEENKVIA 276

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  173 bits (442), Expect = 1e-51
 Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 21/249 (8%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
            PN V+V +  AGV   D   + G Y      +    PF  G E  G++ +  +  + +K
Sbjct: 47  GPNVVVVDVKAAGVCFPDYLMTKGEY-----QLKMEPPFVPGIETAGVVRSAPE-GSGIK 100

Query: 175 VGTP-AAIMTFGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQ-AGPASG 230
            G    A    G YAE   V   +ILP      D E VA++ +  T   A  +     +G
Sbjct: 101 PGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAG 160

Query: 231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF 290
           + VLV  AAGG G  A+Q+AK  G  V+A        + +K +G D V+  + E      
Sbjct: 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAV 219

Query: 291 KEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEK 349
           +E     G D++ + +GG  F+  ++ LA  GRL+V+G  +   G       N      +
Sbjct: 220 REATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAA---GGIPTIKVN------R 270

Query: 350 ILAKSQTVV 358
           +L ++ +++
Sbjct: 271 LLLRNASLI 279

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  172 bits (439), Expect = 6e-51
 Identities = 52/230 (22%), Positives = 86/230 (37%), Gaps = 19/230 (8%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR--LPFDAGFEAVGLIAAVGDSV 170
            ++ + V VK++ A +N SD+N   G Y       G    LP   G E V  + AVG +V
Sbjct: 51  AVRGSDVRVKMLAAPINPSDINMIQGNY-------GLLPELPAVGGNEGVAQVVAVGSNV 103

Query: 171 NNVKVGTP--AAIMTFGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTASIALEQ-A 225
             +K G     A    G++    +   + ++ V    P      +  +  TA   L    
Sbjct: 104 TGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFE 163

Query: 226 GPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG----EHKAQLLKELGVDRVINY 281
               G  V+  A+  G GQ  +Q+A   G   +         +  +  LK LG + VI  
Sbjct: 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITE 223

Query: 282 KAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           +      +           +    VGG      L+ LA  G ++  G ++
Sbjct: 224 EELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMA 273

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  170 bits (433), Expect = 4e-50
 Identities = 70/229 (30%), Positives = 95/229 (41%), Gaps = 25/229 (10%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
                VLV+    GVN  D+    G Y               G E  G I  VG  V+  
Sbjct: 53  AGEGEVLVRAEAIGVNRPDIAQRQGSY-----PPPKDASPILGLELSGEIVGVGPGVSGY 107

Query: 174 KVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD----------PEVVAMLTSGLTASIAL 222
            VG     +   G+YAE+ ++P+  ILP   P           PE         T    L
Sbjct: 108 AVGDKVCGLANGGAYAEYCLLPAGQILPF--PKGYDAVKAAALPETF------FTVWANL 159

Query: 223 -EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY 281
            + AG   G+ VL+     G G  A+QLA+  G  V AT G   K +  + LG  R INY
Sbjct: 160 FQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINY 219

Query: 282 KAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           ++ED   V K E  +G DII + +G   F   + +LA  G L +I  + 
Sbjct: 220 RSEDFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLG 268

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  163 bits (414), Expect = 2e-47
 Identities = 48/249 (19%), Positives = 88/249 (35%), Gaps = 31/249 (12%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFS----DGNDIGSRLPFDAGFEAVGLIAAVGD 168
            + PN V+VK + + VN SD+N   G Y S          +      G E +  +  VG 
Sbjct: 30  NLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGS 89

Query: 169 SVNNVKVGTP--AAIMTFGSYAEFTMVPSKHILPVARP------------DPEVVAMLT- 213
           +V++++ G     + + FG++    +      + +  P                 A ++ 
Sbjct: 90  NVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISV 149

Query: 214 SGLTASIALEQAGP-ASGKKVLV-TAAAGGTGQFAVQLAKLAGNTVVATCGG----EHKA 267
           + LTA + L        GK   +        G++A Q+ KL     ++        +   
Sbjct: 150 NPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV 209

Query: 268 QLLKELGVDRVINYKAEDIKTVFKE------EFPKGFDIIYESVGGDMFNLCLKALAVYG 321
             LKELG  +VI     + +           +      +    VGG       + L   G
Sbjct: 210 ASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNG 269

Query: 322 RLIVIGMIS 330
            ++  G +S
Sbjct: 270 LMLTYGGMS 278

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  162 bits (413), Expect = 4e-47
 Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 27/236 (11%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-N 172
                VL+K+  + +N +D+    G+Y     D         G EA G +A +G     +
Sbjct: 47  PGEGEVLLKVAASALNRADLMQRQGQY-----DPPPGASNILGLEASGHVAELGPGCQGH 101

Query: 173 VKVGTP-AAIMTFGSYAEFTMVPSKHILPVARPD----------PEVVAMLTSGLTASIA 221
            K+G    A++  G  A++  VP   ++P+  P+          PE        LTA   
Sbjct: 102 WKIGDTAMALLPGGGQAQYVTVPEGLLMPI--PEGLTLTQAAAIPEA------WLTAFQL 153

Query: 222 L-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN 280
           L       +G  VL+ A   G G  A+QL ++AG   + T G + K Q+ ++LG     N
Sbjct: 154 LHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFN 213

Query: 281 YKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGE 335
           YK ED      +     G ++I + +GG  +   +  LA+ GR ++ G++      
Sbjct: 214 YKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDIN 269

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  160 bits (408), Expect = 6e-47
 Identities = 72/259 (27%), Positives = 103/259 (39%), Gaps = 37/259 (14%)

Query: 108 APLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG 161
            PL L        +   V++++   G+N +D     G Y           PF  G E VG
Sbjct: 11  GPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAY-----LTRLHPPFIPGMEVVG 65

Query: 162 LIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPV--ARPDPEVVAMLTSGLTAS 219
           ++   G           AA++  G  AE   VP   +LP+       E  A   S LTA 
Sbjct: 66  VV--EGRRY--------AALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAY 115

Query: 220 IALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI 279
           +AL++A    G+KVLV AAAG  G  AVQ+A+  G  V+A      K  L   LG +   
Sbjct: 116 LALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAA 175

Query: 280 NYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQ 339
            Y         + +   G D++ E V G      L  LA  GRL+ IG         G  
Sbjct: 176 TYAEV----PERAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAE------GEV 224

Query: 340 PSNYPGLCEKILAKSQTVV 358
               P     ++ ++  V+
Sbjct: 225 APIPPLR---LMRRNLAVL 240

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  162 bits (411), Expect = 6e-47
 Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 31/231 (13%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  VLV+I  +G N  D    +G            LP   G +  G + AVG  V++ 
Sbjct: 30  PAPGQVLVQIEASGTNPLDAKIRAGEAP----HAQQPLPAILGMDLAGTVVAVGPEVDSF 85

Query: 174 KVG------TPAAIMTFGSYAEFTMVPSKHILPVARPD----------PEVVAMLTSGLT 217
           +VG      T       G++A+F  V ++ +     P           P V       +T
Sbjct: 86  RVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASK--PAALTMRQASVLPLV------FIT 137

Query: 218 ASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD 276
           A   L ++A    G+ VL+    GG G  A+Q+A   G  V AT  G    + +++LG  
Sbjct: 138 AWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGS-DLEYVRDLGAT 196

Query: 277 RVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
            +   +  +     +    +GFD++Y+++GG + +    A+  +G ++   
Sbjct: 197 PIDASREPE-DYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCL 246

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  161 bits (409), Expect = 2e-46
 Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 23/238 (9%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSG---------RYFSDGNDIGSRLPFDAGFEAVGLI 163
              PN V+VK+  A VN  DVN  SG         R        G   P   G +  G++
Sbjct: 47  IHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVV 106

Query: 164 AAVGDSVNNVKVGTP----AAIMTFGSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLT 217
              G  V   K G            G+ +EF +V    +   P +    +  ++    LT
Sbjct: 107 MECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALT 166

Query: 218 ASIALE-----QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE 272
           A  A+           +GK+VL+  A+GG G FA+Q+ K     V A C  +  ++L+++
Sbjct: 167 AWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQD-ASELVRK 225

Query: 273 LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS 330
           LG D VI+YK+  ++   K    K FD I ++VGG         L  +     + +++
Sbjct: 226 LGADDVIDYKSGSVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVT 281

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  154 bits (391), Expect = 4e-44
 Identities = 73/256 (28%), Positives = 102/256 (39%), Gaps = 41/256 (16%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P  V V++  A +N  DV    G            LP   G +  G++ AVG  V   
Sbjct: 25  PGPKEVRVRLKAAALNHLDVWVRKGVAS-----PKLPLPHVLGADGSGVVDAVGPGVEGF 79

Query: 174 KVG-----TPAAIMTF-----------------------GSYAEFTMVPSKHILPVARPD 205
             G      P                             G+YAE+ ++P  ++ P   P 
Sbjct: 80  APGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPK--PK 137

Query: 206 ----PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT 260
                E  A+  + LTA   + ++ G   G  VLV AA  G    A+Q+AKL G  V+AT
Sbjct: 138 NLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT 197

Query: 261 CGGEHKAQLLKELGVDRVINYKAEDI-KTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
            G E K +  K LG D  +NY   D  K V +    KG D + +  G   F   +KA A 
Sbjct: 198 AGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATAN 257

Query: 320 YGRLIVIGMISQYQGE 335
            GR+ + G  S Y+G 
Sbjct: 258 GGRIAIAGASSGYEGT 273

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  148 bits (374), Expect = 2e-41
 Identities = 48/259 (18%), Positives = 80/259 (30%), Gaps = 27/259 (10%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRY-----------------------FSDGNDIGSRL 151
            P+ VL++I  + +N SD+    G                                    
Sbjct: 31  GPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAGRLDA 90

Query: 152 PFDAGFEAVGLIAAVGDSVNNVKVGTP-AAIMTFGSYAEFTMVPSKHILPV--ARPDPEV 208
               G E  G++   G S     +     A +    Y+++  +P+   L +       + 
Sbjct: 91  SMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVLPEGATPADG 150

Query: 209 VAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ 268
            +   + LTA   +E         ++ TAAA   GQ   Q+    G  +V     + +A 
Sbjct: 151 ASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQAD 210

Query: 269 LLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           LLK  G   V N  +        E     G  I +++ GG      +             
Sbjct: 211 LLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAR 270

Query: 328 MISQYQGEHGWQPSNYPGL 346
             S+Y      Q   Y GL
Sbjct: 271 EYSRYGSTTHKQVYLYGGL 289

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  145 bits (369), Expect = 1e-40
 Identities = 59/254 (23%), Positives = 91/254 (35%), Gaps = 39/254 (15%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
               + ++V+ +   +N  D              +    PF    +  G++ AVG SV  
Sbjct: 50  EAGEHDIIVRTLAVSLNYRDKLVLETGM-----GLDLAFPFVPASDMSGVVEAVGKSVTR 104

Query: 173 VKVGTPAAIMTF-------------------------GSYAEFTMVPSKHILPVARPD-- 205
            + G                                 G  +E+ ++P    +    P   
Sbjct: 105 FRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAA--PKSL 162

Query: 206 --PEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
              E   +  +GLTA  AL E+    +G +V+V    GG   F +Q+AK  G  V+ T  
Sbjct: 163 DAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGT-GGVALFGLQIAKATGAEVIVTSS 221

Query: 263 GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVGGDMFNLCLKALAVYG 321
              K      LG D  IN   ED           +G D I E  GG      LKA+A  G
Sbjct: 222 SREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDG 281

Query: 322 RLIVIGMISQYQGE 335
           R+ VIG++  ++  
Sbjct: 282 RISVIGVLEGFEVS 295

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  146 bits (371), Expect = 2e-40
 Identities = 62/325 (19%), Positives = 102/325 (31%), Gaps = 71/325 (21%)

Query: 82  QLPESFEKLVVHTLNHNFRDATIK--VRAPLRL------PIKPNHVLVKIIFAGVNASDV 133
            +P+++  L +   + +         VR  LRL       + P+ VLV ++ + +N + V
Sbjct: 20  PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTV 79

Query: 134 NFSSGRYFSDGNDIGS------------RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI 181
             +        + +              +     G +  G++   G  V   K G    +
Sbjct: 80  WSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIV 139

Query: 182 M----------------------------TFGSYAEFTMVPSKHILPVAR--PDPEVVAM 211
                                         FG  AE+ +V +  +LP        E    
Sbjct: 140 HPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVS 199

Query: 212 LTSGLTASIALEQAGPAS---GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ 268
                TA   L     A    G  VL+  A+GG G +A+Q  K  G   VA      K  
Sbjct: 200 PLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEA 259

Query: 269 LLKELGVDRVINYKAEDIKTVFKEEFP------------------KGFDIIYESVGGDMF 310
            ++ LG D VIN     I     ++                    +  DI++E  G   F
Sbjct: 260 AVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTF 319

Query: 311 NLCLKALAVYGRLIVIGMISQYQGE 335
            L +      G ++  G  S Y   
Sbjct: 320 GLSVIVARRGGTVVTCGSSSGYLHT 344

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  141 bits (359), Expect = 1e-39
 Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 23/219 (10%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
           +  + +LV+    G+N  D  F      +             G +  G+I  VG  V++ 
Sbjct: 27  LAADDILVQNQAIGINPVDWKFIKANPINW------SNGHVPGVDGAGVIVKVGAKVDSK 80

Query: 174 KVGTP----AAIMTFGSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIALEQAGP 227
            +G       ++   GS+AEFT++ +  +  LP         A+    LTA  A E+   
Sbjct: 81  MLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPL 140

Query: 228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
              ++VL+    G       Q+   AG  V        +A L  + GV  +    ++   
Sbjct: 141 TKQREVLI-VGFGAVNNLLTQMLNNAGYVVDLVSASLSQA-LAAKRGVRHLYREPSQV-- 196

Query: 288 TVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
                   + +  I+++V        + +L   G +I I
Sbjct: 197 -------TQKYFAIFDAVNSQNAAALVPSLKANGHIICI 228

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  141 bits (359), Expect = 2e-39
 Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 25/228 (10%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
            K + +LVKI    VN  D                S+ P   GF+A+G++ +VG+ V   
Sbjct: 30  PKVHEILVKIQSISVNPVDTKQRLMDV--------SKAPRVLGFDAIGVVESVGNEVTMF 81

Query: 174 KVG----TPAAIMTFGSYAEFTMVPSKHI--LPVARPDPEVVAM-LTSGLTASIAL---- 222
             G       +    GS AE+ ++  + +   P      + V++ LT G+TA   L    
Sbjct: 82  NQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLT-GITAYETLFDVF 140

Query: 223 ---EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI 279
                     GK +L+   AGG G  A Q+AK  G  V+ T       +  K++G D V+
Sbjct: 141 GISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVL 200

Query: 280 NYKAEDIKTVFKEEFPKGFDIIYESVGGDM-FNLCLKALAVYGRLIVI 326
           N+K   +    K +  +  D ++ +   DM ++  ++ +   G +  I
Sbjct: 201 NHKESLLNQF-KTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATI 247

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  143 bits (361), Expect = 6e-39
 Identities = 57/285 (20%), Positives = 89/285 (31%), Gaps = 63/285 (22%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFS-----------DGNDIGSRLPFD-AGFEAVG 161
           + P   LV ++ + VN + V+ S     S                   LP+   G +  G
Sbjct: 68  LGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAG 127

Query: 162 LIAAVGDSVNNVKVG----------------TPAAIMT------------FGSYAEFTMV 193
           ++   G  VN  + G                     M             FG  AE  +V
Sbjct: 128 VVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALV 187

Query: 194 PSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPA---SGKKVLVTAAAGGTGQFAVQ 248
            S  ++P        E  A      TA   L     A    G  VL+  A+GG G +A Q
Sbjct: 188 KSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQ 247

Query: 249 LAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP------------- 295
            A   G   +       KA++ + +G + +I+  AE  +    E                
Sbjct: 248 FALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIR 307

Query: 296 -----KGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGE 335
                +  DI++E  G + F   +      G +      S Y  E
Sbjct: 308 ELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHE 352

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  140 bits (354), Expect = 1e-38
 Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 19/226 (8%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
              + +LV++    VN  D                       G++A G+++AVG  V   
Sbjct: 50  PAGHDILVEVKAVSVNPVDYKVRRSTPPDGT------DWKVIGYDAAGIVSAVGPDVTLF 103

Query: 174 KVG----TPAAIMTFGSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIAL----- 222
           + G       +I+  G+ AEF +V  + +   P      E  A+  + +TA  A      
Sbjct: 104 RPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLD 163

Query: 223 -EQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVIN 280
             +  P +   +L+   AGG G  AVQ+A+     TV+AT       + +K LG   VI+
Sbjct: 164 VNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVID 223

Query: 281 YKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
           +       V          +   +            +A  GR  +I
Sbjct: 224 HSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  134 bits (341), Expect = 6e-37
 Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 16/184 (8%)

Query: 161 GLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPE---------VVA 210
             +A V +S N     G+   ++    +    +   K +  +    P+          + 
Sbjct: 70  QQVARVVESKNSAFPAGS--IVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIG 127

Query: 211 MLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQL 269
           M   GLTA   L E  G   G+ VLV+AAAG  G    Q+AKL G  VV   G + K   
Sbjct: 128 M--PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY 185

Query: 270 LKELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
           LK++G D   NYK    ++   K+  P G+D  +++VGG+  N  L  +  +G++ + G 
Sbjct: 186 LKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGA 245

Query: 329 ISQY 332
           IS Y
Sbjct: 246 ISVY 249

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  134 bits (341), Expect = 9e-37
 Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 40/280 (14%)

Query: 98  NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNA------SDVNFSSGRYFSDGNDIGSRL 151
           +F   T  V   LR+P   N VLVK ++   +          + S+              
Sbjct: 22  DFDFTTTTV--ELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQ--------- 70

Query: 152 PFDAGFEAVGL-IAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPE-- 207
            +  G    G  ++ + +S + + K G    +    ++ E++++         +      
Sbjct: 71  AYTPGQPIQGYGVSRIIESGHPDYKKGD--LLWGIVAWEEYSVITPMTHAHF-KIQHTDV 127

Query: 208 -------VVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVA 259
                  ++ M   G+TA     E   P  G+ V V+AA+G  GQ   QLAK+ G  VV 
Sbjct: 128 PLSYYTGLLGM--PGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVG 185

Query: 260 TCGGEHKAQLLK-ELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKAL 317
           + G + K  LLK + G D   NYK E D+    K  FP G DI +E+VGG M +  L  +
Sbjct: 186 SAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNM 245

Query: 318 AVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
            ++GR+ V GMISQY  E+     N       I+ K   +
Sbjct: 246 NMHGRIAVCGMISQYNLENQEGVHNLS----NIIYKRNRI 281

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  134 bits (339), Expect = 2e-36
 Identities = 75/273 (27%), Positives = 112/273 (41%), Gaps = 40/273 (14%)

Query: 91  VVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRY--FSDGNDIG 148
            +  +        I V  P     K   VL+K+  AGV  SDV+   GR+       D+G
Sbjct: 5   RLVEIGKPLSLQEIGVPKP-----KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLG 59

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTF------------------------ 184
            +LP   G E  G I  VGD V     G   A+  +                        
Sbjct: 60  VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119

Query: 185 ----GSYAEFTMVPSKHILPVARP-DPEVVAMLT-SGLTASIALEQAGPASGKKVLVTAA 238
               G+YAE+ +VP    +   R  +    A LT SG+T   A+ +A     K +LV  A
Sbjct: 120 INFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGA 179

Query: 239 AGGTGQFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI-KTVFKEEFPK 296
            GG G  AVQ+AK ++G T++     E   +  K  G D VIN   +D    + +    K
Sbjct: 180 GGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESK 239

Query: 297 GFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
           G D + +        ++  KALA  G+ +++G+
Sbjct: 240 GVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGL 272

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  134 bits (339), Expect = 2e-36
 Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 35/273 (12%)

Query: 106 VRAPLRLPIKPNHVLVKIIFAGVNA------SDVNFSSGRYFSDGNDIGSRLPFDAGFEA 159
               L   I    V V+ ++  V+       ++   +   Y +         P+      
Sbjct: 32  EEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD--YIT---------PWQLSQVV 80

Query: 160 VGL-IAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPE--------VV 209
            G  I  + +S + N+  G       +  +    ++    +  V     +         +
Sbjct: 81  DGGGIGIIEESKHTNLTKGDFVTSFYWP-WQTKVILDGNSLEKVDPQLVDGHLSYFLGAI 139

Query: 210 AMLTSGLTASIAL-EQAGPASGKK--VLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEH 265
            M   GLT+ I + E+    +G    ++V+ AAG  G  A Q+    G + VV  CG   
Sbjct: 140 GM--PGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 197

Query: 266 KAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
           K  LL  ELG D  INYK +++    +E  P G D+ +++VGG++ +  +  +     +I
Sbjct: 198 KCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHII 257

Query: 325 VIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           + G ISQY  +  + P   P +      ++ T 
Sbjct: 258 LCGQISQYNKDVPYPPPLSPAIEAIQKERNITR 290

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  128 bits (323), Expect = 4e-34
 Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 39/240 (16%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            +  + V V++    +N SD +              +      G +  G + AVG  V +
Sbjct: 33  MLPRDQVYVRVEAVAINPSDTSM---------RGQFATPWAFLGTDYAGTVVAVGSDVTH 83

Query: 173 VKVG---------TPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTAS 219
           ++VG                 G+++++T+   +    +  P      +  A+     TA 
Sbjct: 84  IQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKI--PKGLSFEQAAALPAGISTAG 141

Query: 220 IALEQAG-------------PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK 266
           +A++  G              +    VLV   +  T    +Q+ +L+G   +ATC   + 
Sbjct: 142 LAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNF 201

Query: 267 AQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIV 325
             L K  G + V +Y+A ++    +           + +   +    C  A+   G   V
Sbjct: 202 D-LAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYV 260

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  118 bits (298), Expect = 1e-30
 Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 41/253 (16%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
                 V+V+I  AGV  +D++   G +      +  +LP+  G E VG I  V + V  
Sbjct: 38  LEGRFDVIVRIAGAGVCHTDLHLVQGMW---HELLQPKLPYTLGHENVGYIEEVAEGVEG 94

Query: 173 VKVGTPAAI----------------------------MTFGSYAEFTMVPSKHILPVAR- 203
           ++ G P  +                               G +AEF     + ++ + + 
Sbjct: 95  LEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKD 154

Query: 204 ----PDPEVVAMLTSGLTASIALEQAGPA--SGKKVLVTAAAGGTGQFAVQLAKLAGN-T 256
                  E+  +  +G+TA  A+++A      G  V +    GG G  AVQL K+    T
Sbjct: 155 ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPAT 213

Query: 257 VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLK 315
           V+A    E K +L + LG D V++ + + +K V +    +G ++  + VG     +    
Sbjct: 214 VIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPY 273

Query: 316 ALAVYGRLIVIGM 328
            L   GRLI++G 
Sbjct: 274 LLGRMGRLIIVGY 286

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  119 bits (299), Expect = 1e-29
 Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 27/225 (12%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
           P+    V + +  AGVN  D   + G Y               G E  G++   G  V  
Sbjct: 235 PLGDGEVRIAMRAAGVNFRDALIALGMYPGVA---------SLGSEGAGVVVETGPGVTG 285

Query: 173 VKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-EQAGP 227
           +  G     M   ++    +   + +  +  P         ++    LTA  AL + AG 
Sbjct: 286 LAPGDRVMGMIPKAFGPLAVADHRMVTRI--PAGWSFARAASVPIVFLTAYYALVDLAGL 343

Query: 228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
             G+ +LV +AAGG G  A+QLA+  G  V AT   +    +   L  + + + +  D  
Sbjct: 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVE--LSREHLASSRTCD-- 399

Query: 288 TVFKEEFP-----KGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
             F+++F      +G D++  S+ G+  +  L+ L   GR + +G
Sbjct: 400 --FEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELG 442

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  113 bits (284), Expect = 9e-29
 Identities = 60/277 (21%), Positives = 98/277 (35%), Gaps = 49/277 (17%)

Query: 91  VVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR 150
               +        I    P      P  +L+K+  AG+  SD+                 
Sbjct: 5   QYTEIGSEPVVVDIPTPTP-----GPGEILLKVTAAGLCHSDIFVMDM----PAAQYAYG 55

Query: 151 LPFDAGFEAVGLIAAVGDSVNNVKVG---------------------------------T 177
           LP   G E VG +A +G+ V    VG                                 T
Sbjct: 56  LPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGIT 115

Query: 178 PAAIMTFGSYAEFTMVPSKHILPVARP-DPEVVAMLT-SGLTASIALEQAGPA--SGKKV 233
           P  + + GS AE+ +V S   L      DP   A LT +GLT   A+ +  P    G   
Sbjct: 116 PPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTA 175

Query: 234 LVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE 292
           +V    GG G   +Q+ +      V+A    + +  L +E+G D  +   A     + + 
Sbjct: 176 VVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIREL 234

Query: 293 EFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
              +G   +++ VG     +   + +AV G + V+G+
Sbjct: 235 TGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGI 271

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  111 bits (280), Expect = 4e-28
 Identities = 68/272 (25%), Positives = 107/272 (39%), Gaps = 48/272 (17%)

Query: 91  VVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR 150
           VV       +   ++             VLV+I   GV  +D++ + G +      +  +
Sbjct: 5   VVEQFKEPLKIKEVEKPTI-----SYGEVLVRIKACGVCHTDLHAAHGDW-----PVKPK 54

Query: 151 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------------- 181
           LP   G E VG++  VG  V ++KVG    I                             
Sbjct: 55  LPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY 114

Query: 182 MTFGSYAEFTMVPSKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPASGKKVLVTA 237
              G YAE+    + +++ +  P     E  A +  +G+T   AL+  G   G+ V +  
Sbjct: 115 SVDGGYAEYCRAAADYVVKI--PDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAI-Y 171

Query: 238 AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKG 297
             GG G  AVQ AK  G  VVA   G+ K +L KELG D V+N   ED     KE+   G
Sbjct: 172 GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVG-G 230

Query: 298 FD-IIYESVGGDMFNLCLKALAVYGRLIVIGM 328
               +  +V    F     ++   G  +++G+
Sbjct: 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGL 262

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  110 bits (278), Expect = 8e-28
 Identities = 63/274 (22%), Positives = 98/274 (35%), Gaps = 47/274 (17%)

Query: 91  VVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR 150
           ++   +       + +  P     +   VL++I  AGV  +D+    G         G R
Sbjct: 8   LLKKFSEPLSIEDVNIPEP-----QGEEVLIRIGGAGVCRTDLRVWKGVEA----KQGFR 58

Query: 151 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------------M 182
           LP   G E  G I  VG+ +  VK G    +                             
Sbjct: 59  LPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT 117

Query: 183 TFGSYAEFTMVPSKHILPVARP-DPEVVAMLT-SGLTASIALEQAGPASGKK---VLVTA 237
           T G ++E+ +V S   L       P   A L  +G T+  A+ QA P   K    V++  
Sbjct: 118 TNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVN 177

Query: 238 AAGGTGQFAVQLAK--LAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP 295
             GG   + +Q+ K  +   T+V     +       ELG D V   K +    + K    
Sbjct: 178 GIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMK-DAESLINKLTDG 236

Query: 296 KGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
            G  I  + VG  +      K LA  G +I++GM
Sbjct: 237 LGASIAIDLVGTEETTYNLGKLLAQEGAIILVGM 270

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  109 bits (276), Expect = 1e-27
 Identities = 60/272 (22%), Positives = 103/272 (37%), Gaps = 48/272 (17%)

Query: 91  VVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR 150
           VV           + V  P      P  V VKI  +GV  +D++ + G +      +   
Sbjct: 7   VVRAFGAPLTIDEVPVPQP-----GPGQVQVKIEASGVCHTDLHAADGDW-----PVKPT 56

Query: 151 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------------- 181
           LPF  G E VG ++AVG  V+ VK G    +                             
Sbjct: 57  LPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY 116

Query: 182 MTFGSYAEFTMVPSKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPASGKKVLVTA 237
              G Y E+ +    ++  +  P       +A +L +G+T    L+      G+ V++ +
Sbjct: 117 SVNGGYGEYVVADPNYVGLL--PDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVI-S 173

Query: 238 AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKG 297
             GG G  AVQ A+  G  V A    + K  L + LG +  +N +  D     ++E   G
Sbjct: 174 GIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEI-GG 232

Query: 298 FD-IIYESVGGDMFNLCLKALAVYGRLIVIGM 328
              ++  +V    F+  +  +   G + + G+
Sbjct: 233 AHGVLVTAVSPKAFSQAIGMVRRGGTIALNGL 264

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  105 bits (264), Expect = 7e-26
 Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 47/281 (16%)

Query: 83  LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFS 142
           +PE+ + ++ +  +       I V  P     K N +L+ + ++GV  +D++   G +  
Sbjct: 2   IPETQKGVIFYESHGKLEYKDIPVPKP-----KANELLINVKYSGVCHTDLHAWHGDW-- 54

Query: 143 DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI--------------------- 181
               +  +LP   G E  G++  +G++V   K+G  A I                     
Sbjct: 55  ---PLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC 111

Query: 182 --------MTFGSYAEFTMVPSKHILPVARP---DPEVVA-MLTSGLTASIALEQAGPAS 229
                      GS+ ++    +     +  P   D   VA +L +G+T   AL+ A   +
Sbjct: 112 PHADLSGYTHDGSFQQYATADAVQAAHI--PQGTDLAQVAPILCAGITVYKALKSANLMA 169

Query: 230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINY-KAEDIKT 288
           G  V ++ AAGG G  AVQ AK  G  V+   GGE K +L + +G +  I++ K +DI  
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVG 229

Query: 289 VFKEEFPKGFD-IIYESVGGDMFNLCLKALAVYGRLIVIGM 328
              +    G   +I  SV         + +   G  +++GM
Sbjct: 230 AVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  103 bits (259), Expect = 4e-25
 Identities = 53/254 (20%), Positives = 93/254 (36%), Gaps = 52/254 (20%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P+ +LVK+   G+  +D +   G +        S  P   G E  G++   G +V ++
Sbjct: 45  PGPDDLLVKVEACGICGTDRHLLHGEF-------PSTPPVTLGHEFCGIVVEAGSAVRDI 97

Query: 174 KVGTPAAI----------------------MTF------GSYAEFTMVPSKHILPVARPD 205
             G                           +        G +AE+ +VP K    +  P 
Sbjct: 98  APGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEI--PL 155

Query: 206 ---PEVVAM---LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVV 258
              P   A    L   L     ++ +G  +G  V +    G  G   VQLA+LAG  TV+
Sbjct: 156 TLDPVHGAFCEPLACCLHG---VDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVI 211

Query: 259 ATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF---PKGFDIIYESVG-GDMFNLCL 314
            +     K +L +E+G    ++  A D+           P G D++ E  G  +      
Sbjct: 212 LSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQST 271

Query: 315 KALAVYGRLIVIGM 328
           +     G ++++G+
Sbjct: 272 RLAKAGGTVVILGV 285

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 96.5 bits (241), Expect = 1e-22
 Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 52/276 (18%)

Query: 90  LVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS 149
           ++     +      + V  P      P  VL+K++   +  +D++      ++       
Sbjct: 8   IMKTKPGYGAELVEVDVPKP-----GPGEVLIKVLATSICGTDLHIYEWNEWAQSRI--- 59

Query: 150 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------MTF--- 184
           + P   G E  G +  +G  V  ++VG   ++                            
Sbjct: 60  KPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV 119

Query: 185 ---GSYAEFTMVPSKHILPVARPD---PEVVAM---LTSGLTASIALEQAGPASGKKVLV 235
              G +AE+ +VP+++I     P    PE   +   L + +        AGP SGK VL+
Sbjct: 120 DTDGVFAEYAVVPAQNIWKN--PKSIPPEYATLQEPLGNAVDTV----LAGPISGKSVLI 173

Query: 236 TAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF 294
           T A G  G   + +AK +G   V+ +   + + +L K++G D VIN   ED+     +  
Sbjct: 174 TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDIT 232

Query: 295 -PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
              G D+  E  G        L+A+   GR+ ++G+
Sbjct: 233 DGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL 268

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 95.4 bits (238), Expect = 3e-22
 Identities = 58/252 (23%), Positives = 88/252 (34%), Gaps = 52/252 (20%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
             + V VKI  +G+  SD+     R F +G       P   G E  G I AVG  V+++ 
Sbjct: 24  HQDEVRVKIASSGLCGSDL----PRIFKNG---AHYYPITLGHEFSGYIDAVGSGVDDLH 76

Query: 175 VGTPAAI----------------------MTF------GSYAEFTMVPSKHILPVARPD- 205
            G   A                         F      G +AE+ +V  K++  +  P  
Sbjct: 77  PGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFAL--PTD 134

Query: 206 --PEVVAM---LTSGLTASIALEQAGPASGKKVLVTAAAGGT-GQFAVQLAKLAG-NTVV 258
              E  A    +T GL    A   A     K V++  A  GT G  A+Q A   G  +V 
Sbjct: 135 MPIEDGAFIEPITVGLH---AFHLAQGCENKNVIIIGA--GTIGLLAIQCAVALGAKSVT 189

Query: 259 ATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDM-FNLCLKA 316
           A      K  L K  G  +  N        +       +   +I E+ G      L ++ 
Sbjct: 190 AIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEI 249

Query: 317 LAVYGRLIVIGM 328
              + +L ++G 
Sbjct: 250 AGPHAQLALVGT 261

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 54/275 (19%), Positives = 99/275 (36%), Gaps = 51/275 (18%)

Query: 90  LVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS 149
           L               V  P      P  +LV++  A +  +D++      ++ G     
Sbjct: 4   LAKLAPEEGLTLVDRPVPEP-----GPGEILVRVEAASICGTDLHIWKWDAWARGR---I 55

Query: 150 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------MTF--- 184
           R P   G E  G++ AVG  V   +VG   ++                            
Sbjct: 56  RPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV 115

Query: 185 ---GSYAEFTMVPSKHILPVARPD---PEVVAM---LTSGLTASIALEQAGPASGKKVLV 235
              G +AE+ +VP+++      P     EV A+     + +     +      SGK VL+
Sbjct: 116 DRDGGFAEYVVVPAENAWVN--PKDLPFEVAAILEPFGNAVHT---VYAGSGVSGKSVLI 170

Query: 236 TAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF 294
           T A G  G  A  + + +G   ++ +    ++    +    DR++N   ED+  V +   
Sbjct: 171 TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLEEDLLEVVRRVT 228

Query: 295 PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
             G +++ E  G     +  L AL   G   ++G+
Sbjct: 229 GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI 263

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 90.8 bits (226), Expect = 2e-20
 Identities = 58/294 (19%), Positives = 93/294 (31%), Gaps = 77/294 (26%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            +K  A        PL         I    +LV+I+ AGV  SDV      +   G D  
Sbjct: 15  GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDV------HMFRGEDPR 68

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNN-----VKVG--------------------------- 176
             LP   G E  G +  V     +     +K G                           
Sbjct: 69  VPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCP 128

Query: 177 ----------TPAAIMTFGSYAEFTMVPSKHILPVARPD--PEVVAML----TSGLTASI 220
                             G Y+   ++  +  +         +V+AM      +   A  
Sbjct: 129 NRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHA-- 186

Query: 221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVI 279
             E     +GK V++  A G  G F V +A+  G   V+   G  ++ +L +E+G D  +
Sbjct: 187 FDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL 245

Query: 280 N---YKAEDIKTVFKEEF-PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
           N      E+ +    +    +G D I E+ G         + L   G   V G+
Sbjct: 246 NRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGV 299

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 86.1 bits (214), Expect = 4e-20
 Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 216 LTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELG 274
           LTA  +L E    + G++VL+ +A GG G  AV +AK+ G  +  T G + K ++L  LG
Sbjct: 24  LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLG 83

Query: 275 VDRVINYKAEDIKTVFKEEFP-----KGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
           V+ V + ++ D    F +E        G D++  S+ G+     ++ LA  GR I +G
Sbjct: 84  VEYVGDSRSVD----FADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 137

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 89.2 bits (222), Expect = 4e-20
 Identities = 62/259 (23%), Positives = 97/259 (37%), Gaps = 55/259 (21%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS---RLPFDAGFEAVGLIAAVGDS 169
              PN VL+++   G+  SDV      Y+  G  IG+   + P   G EA G +  VG S
Sbjct: 28  EPGPNEVLLRMHSVGICGSDV-----HYWEYG-RIGNFIVKKPMVLGHEASGTVEKVGSS 81

Query: 170 VNNVKVGTPAAI----------------------MTF-------GSYAEFTMVPSKHILP 200
           V ++K G   AI                      + F       G+   F    +     
Sbjct: 82  VKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYK 141

Query: 201 VARPD---PEVVAM---LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG 254
           +  PD    E  A+   L+ G+    A  + G   G KVLV   AG  G   + +AK  G
Sbjct: 142 L--PDNVTFEEGALIEPLSVGIH---ACRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMG 195

Query: 255 -NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV---FKEEFPKGFDIIYESVGGDM- 309
              VV T     +    KE+G D V+    E  + +    + +     ++  E  G +  
Sbjct: 196 AAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEAS 255

Query: 310 FNLCLKALAVYGRLIVIGM 328
               + A    G L+++G+
Sbjct: 256 IQAGIYATRSGGTLVLVGL 274

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 54/259 (20%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN--DIGSRLPFDAGFEAVGLIAAVGDSV 170
             K + VL+++ + G+  SDV      Y+  G   D   + P   G EA G +  VG +V
Sbjct: 25  EPKEDEVLLQMAYVGICGSDV-----HYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV 79

Query: 171 NNVKVGTPAAI----------------------MTF-------GSYAEFTMVPSKHILPV 201
            ++K G   A+                      +TF       G+ A + +  +     +
Sbjct: 80  KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKL 139

Query: 202 ARPD---PEVVAM---LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN 255
             PD    E  A+   L+ G+    A  +AG   G  VLV   AG  G  +V  AK  G 
Sbjct: 140 --PDNVSLEEGALLEPLSVGVH---ACRRAGVQLGTTVLVI-GAGPIGLVSVLAAKAYGA 193

Query: 256 TVVATCGGEHKAQLLKELGVDR--VINYKAEDIKTV---FKEEFPKGFDIIYESVGGDM- 309
            VV T     + ++ K  G D   V++   E+  ++    +       ++  +  G +  
Sbjct: 194 FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKC 253

Query: 310 FNLCLKALAVYGRLIVIGM 328
             + +      G L+++GM
Sbjct: 254 ITIGINITRTGGTLMLVGM 272

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 86.1 bits (214), Expect = 5e-19
 Identities = 62/278 (22%), Positives = 99/278 (35%), Gaps = 53/278 (19%)

Query: 93  HTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS--- 149
           H L  +    +++        +K   V V +   G+  SDV+     ++  G  IG    
Sbjct: 18  HDLWISEASPSLESV-QKGEELKEGEVTVAVRSTGICGSDVH-----FWKHG-CIGPMIV 70

Query: 150 RLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI----------------------MTF--- 184
                 G E+ G + AV  SV ++KVG   AI                      + F   
Sbjct: 71  ECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLST 130

Query: 185 ----GSYAEFTMVPSKHILPVARPDPEVVAM---LTSGLTASIALEQAGPASGKKVLVTA 237
               G    +   P+     +     E  AM   L+  L     L++AG   G  VL+  
Sbjct: 131 PPVPGLLRRYVNHPAVWCHKIGNMSYENGAMLEPLSVALA---GLQRAGVRLGDPVLIC- 186

Query: 238 AAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYK----AEDIKTVFKE 292
            AG  G   +  AK AG   +V T   E + +  KE+  + V +      AE+      E
Sbjct: 187 GAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVE 246

Query: 293 EF-PKGFDIIYESVGGDM-FNLCLKALAVYGRLIVIGM 328
            F      +  E  G +      + A+   G++ VIG+
Sbjct: 247 SFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGV 284

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 86.9 bits (215), Expect = 1e-18
 Identities = 51/229 (22%), Positives = 83/229 (36%), Gaps = 24/229 (10%)

Query: 111  RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDA--GFEAVGLIAAVGD 168
             LP      L  + +  +N  DV  ++G+  S  +  G  L  D   G E  G   A G 
Sbjct: 1554 ALPASCQDRLCSVYYTSLNFRDVMLATGKL-SPDSIPGKWLTRDCMLGMEFSG-RDASGR 1611

Query: 169  SVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD----PEVVAMLTSGLTASIAL-E 223
             V          ++     A   ++       V  P      E  ++     TA  +L  
Sbjct: 1612 RV--------MGMVPAEGLATSVLLLQHATWEV--PSTWTLEEAASVPIVYTTAYYSLVV 1661

Query: 224  QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVDRVI 279
            +     G+ VL+ + +GG GQ A+ +A   G  V  T G   K   L+     L      
Sbjct: 1662 RGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFA 1721

Query: 280  NYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 327
            N +    +         KG D++  S+  +     ++ LA +GR + IG
Sbjct: 1722 NSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG 1770

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 85.1 bits (211), Expect = 1e-18
 Identities = 45/275 (16%), Positives = 89/275 (32%), Gaps = 59/275 (21%)

Query: 115 KPNHVLVKIIFAGVNASDVN-FSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVN-- 171
           KP  +++K+   G+  SDV+   +           +  P   G E  G++   G      
Sbjct: 54  KPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINR 113

Query: 172 ----NVKVGTPAAI----------------------MTF------GSYAEFTMVPSKHIL 199
                 ++G P                         +        G++AE+  V +K+  
Sbjct: 114 RTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAW 173

Query: 200 PVARPDPEVVAMLTSGLTASIA--------------LEQAGPASGKKVLVTAAAGGTGQF 245
            +     E+  +                        +   G   G  V++    G  G  
Sbjct: 174 SL----RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLA 228

Query: 246 AVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYE 303
           AV + K AG + V+ +   E +  L KELG D VI+   E+      +     G  +  E
Sbjct: 229 AVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLE 288

Query: 304 SVG-GDMFNLCLKALAVYGR--LIVIGMISQYQGE 335
           + G   +    ++ +    R     + ++++   +
Sbjct: 289 ATGVPQLVWPQIEEVIWRARGINATVAIVARADAK 323

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 79.3 bits (196), Expect = 9e-17
 Identities = 70/262 (26%), Positives = 104/262 (39%), Gaps = 30/262 (11%)

Query: 83  LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFS 142
           +   F+ L       +     +K  +   LP   + VL+K     V  S +N+  G    
Sbjct: 1   MSTLFQALQAEKNADDVS-VHVKTISTEDLP--KDGVLIK-----VAYSGINYKDGLAGK 52

Query: 143 DGNDIGSRLPFDAGFEAVGLIA-------AVGDSVNNVKVGTPAAIMTFGSYAEFTMVPS 195
            G +I    P   G +A G +        A GD V  +       +   G  +E+  VP 
Sbjct: 53  AGGNIVREYPLILGIDAAGTVVSSNDPRFAEGDEV--IATSYELGVSRDGGLSEYASVPG 110

Query: 196 KHI--LPVARPDPEVVAMLTSGLTASI---ALEQAGPASGKK-VLVTAAAGGTGQFAVQL 249
             +  LP      E +   T+G TA++    LEQ G +  K  VLVT A GG G  AV +
Sbjct: 111 DWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSM 170

Query: 250 AKLAGNTVVATCGGEHKAQLLKELGVDRVIN---YKAEDIKTVFKEEFPKGFDIIYESVG 306
               G  VVA+ G    A  LK+LG   VI+        +K + K+++    D     VG
Sbjct: 171 LNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVD----PVG 226

Query: 307 GDMFNLCLKALAVYGRLIVIGM 328
           G      L  +   G + V G+
Sbjct: 227 GKQLASLLSKIQYGGSVAVSGL 248

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 68/260 (26%), Positives = 106/260 (40%), Gaps = 30/260 (11%)

Query: 85  ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG 144
            +F+  VV+     F  A ++  +   LP     VLV+     V+ S VN+  G      
Sbjct: 2   SAFQAFVVNKTETEFT-AGVQTISMDDLP--EGDVLVR-----VHYSSVNYKDGLASIPD 53

Query: 145 NDIGSRLPFDAGFEAVGLIA-------AVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKH 197
             I    PF  G +  G++          GD V  +  G    +  FG Y+E+  +  + 
Sbjct: 54  GKIVKTYPFVPGIDLAGVVVSSQHPRFREGDEV--IATGYEIGVTHFGGYSEYARLHGEW 111

Query: 198 I--LPVARPDPEVVAMLTSGLTASIAL----EQAGPASGKKVLVTAAAGGTGQFAVQLAK 251
           +  LP      E +A+ T+G TA++++    E         VLVT A GG G  AV +  
Sbjct: 112 LVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLA 171

Query: 252 LAGNTVVATCGGEHKAQLLKELGVDRVIN---YKAEDIKTVFKEEFPKGFDIIYESVGGD 308
             G TV A+ G   +   L+ LG   V+      AE I+ + K+ +    D     VGG 
Sbjct: 172 KRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVD----PVGGR 227

Query: 309 MFNLCLKALAVYGRLIVIGM 328
                L  +   G + V G+
Sbjct: 228 TLATVLSRMRYGGAVAVSGL 247

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 77.1 bits (190), Expect = 7e-16
 Identities = 32/262 (12%), Positives = 71/262 (27%), Gaps = 55/262 (20%)

Query: 115 KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVK 174
               + ++ I+ G+  +D    +G+  +       +     G EA+G++           
Sbjct: 25  SYGKIKIRTIYNGICGADREIVNGK-LTLSTLPKGKDFLVLGHEAIGVVEESYH---GFS 80

Query: 175 VGTPAAI----------------------MTF---------GSYAEFTMVPSKHILPVAR 203
            G                             F         G   E+     K+++ + +
Sbjct: 81  QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPK 140

Query: 204 PDPEVVAML--------------TSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQL 249
              ++  +                      +     G  + +KVLV    G  G     L
Sbjct: 141 SIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLL 199

Query: 250 AKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD 308
            +  G    +A      + +              +     +  ++    FD+I ++ G D
Sbjct: 200 FRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKL--KDSVGKFDVIIDATGAD 257

Query: 309 --MFNLCLKALAVYGRLIVIGM 328
             +    +  L   G L + G 
Sbjct: 258 VNILGNVIPLLGRNGVLGLFGF 279

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 76.9 bits (190), Expect = 8e-16
 Identities = 63/265 (23%), Positives = 94/265 (35%), Gaps = 58/265 (21%)

Query: 111 RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG-SRLPFDAGFEAVGLIAAVGDS 169
           R    PN V ++I + GV  SD++          ++   +  P   G E VG + AVGD 
Sbjct: 42  RREPGPNDVKIEIAYCGVCHSDLHQVR-------SEWAGTVYPCVPGHEIVGRVVAVGDQ 94

Query: 170 VNNVKVGTPAAI-------------------------------------MTFGSYAEFTM 192
           V     G    +                                      T G Y++  +
Sbjct: 95  VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIV 154

Query: 193 VPSKHILPVARPDP----EVVA-MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAV 247
           V  +++L +    P      VA +L +G+T    L       GKKV V    GG G   +
Sbjct: 155 VHERYVLRI--RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGV-VGIGGLGHMGI 211

Query: 248 QLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG 307
           +LA   G  VVA    E K +  K LG D V+N +  D          K FD I  +V  
Sbjct: 212 KLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNAD----EMAAHLKSFDFILNTVAA 267

Query: 308 DM-FNLCLKALAVYGRLIVIGMISQ 331
               +     L   G + ++G  + 
Sbjct: 268 PHNLDDFTTLLKRDGTMTLVGAPAT 292

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 45/292 (15%), Positives = 92/292 (31%), Gaps = 60/292 (20%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
             +    LV+ +  GV  +D    +G +   G           G EAVG++         
Sbjct: 22  EPESGEALVRTLRVGVCGTDHEVIAGGH---GGFPEGEDHLVLGHEAVGVVVDPN--DTE 76

Query: 173 VKVGTPAAI------------------------MTF---------GSYAEFTMVPSKHIL 199
           ++ G                               +         G  +EF   P K+++
Sbjct: 77  LEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLV 136

Query: 200 PVARPDPEVVAML--TS----GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKL- 252
            + R   E+  ++   S     L  + A   A         V    G  G   + + K+ 
Sbjct: 137 RIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVD 195

Query: 253 -AGNTVVATCGG----EHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG- 306
             G   +   G     +    +++EL    V + +   ++ V   +  +  D IYE+ G 
Sbjct: 196 DKGYENLYCLGRRDRPDPTIDIIEELDATYVDS-RQTPVEDV--PDVYEQMDFIYEATGF 252

Query: 307 GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVV 358
                  ++ALA  G   ++G+             +      +++  ++ +V
Sbjct: 253 PKHAIQSVQALAPNGVGALLGV-----PSDWAFEVDAGAFHREMVLHNKALV 299

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 57/261 (21%), Positives = 89/261 (34%), Gaps = 61/261 (23%)

Query: 111 RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSV 170
           R  + P  VL+ I++AG+  SD++ +   +           P   G E  G+I  VG  V
Sbjct: 24  RHAVGPRDVLIDILYAGICHSDIHSAYSEWK------EGIYPMIPGHEIAGIIKEVGKGV 77

Query: 171 NNVKVGTPAAI--------------------------------------MTFGSYAEFTM 192
              K+G    +                                         G Y+   +
Sbjct: 78  KKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIV 137

Query: 193 VPSKHILPVARPD---PEVVA-MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 248
           V   +++ V        E VA +L +G+T    L+ +    G KV V A  GG G  AV+
Sbjct: 138 VDENYVISV--DKNAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGV-AGFGGLGSMAVK 194

Query: 249 LAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD 308
            A   G  V      EHK Q    +GV                ++  +  D I  ++   
Sbjct: 195 YAVAMGAEVSVFARNEHKKQDALSMGVKHFY---------TDPKQCKEELDFIISTIPTH 245

Query: 309 M-FNLCLKALAVYGRLIVIGM 328
                 LK L   G L ++G+
Sbjct: 246 YDLKDYLKLLTYNGDLALVGL 266

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 73.8 bits (182), Expect = 7e-15
 Identities = 57/266 (21%), Positives = 98/266 (36%), Gaps = 60/266 (22%)

Query: 111 RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG-SRLPFDAGFEAVGLIAAVGDS 169
                P  V ++II  G+  +D++ +        ND+G S  P   G E VG +  VG  
Sbjct: 29  LRETGPEDVNIRIICCGICHTDLHQTK-------NDLGMSNYPMVPGHEVVGEVVEVGSD 81

Query: 170 VNNVKVGTPAAI------------------------------------MTFGSYAEFTMV 193
           V+   VG    +                                     T G +A+ T+V
Sbjct: 82  VSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVV 141

Query: 194 PSKHILPVARPD---PEVVA-MLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQ 248
             K ++ +  P+    E  A +L +G+T    L   G    G +  +    GG G   V+
Sbjct: 142 HQKFVVKI--PEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGI-LGLGGVGHMGVK 198

Query: 249 LAKLAGNTVVATCGGEHKAQ-LLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVG 306
           +AK  G+ V        K +  L++LG D  +       +  +         D + ++V 
Sbjct: 199 IAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS-----LDYVIDTVP 253

Query: 307 GDM-FNLCLKALAVYGRLIVIGMISQ 331
                   L  L + G+LI++G+I+ 
Sbjct: 254 VHHALEPYLSLLKLDGKLILMGVINN 279

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 59/255 (23%), Positives = 95/255 (37%), Gaps = 32/255 (12%)

Query: 90  LVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGS 149
           L++   +     A+++     +LP     V V      V+ S +N+      +    I  
Sbjct: 4   LILEQQDGKTL-ASVQHLEESQLP--AGDVTVD-----VHWSSLNYKDALAITGKGKIIR 55

Query: 150 RLPFDAGFEAVGLIA-------AVGDSV--NNVKVGTPAAIMTFGSYAEFTMVPSKHI-- 198
             P   G +  G +          G  V      VG       +G  AE   V    +  
Sbjct: 56  HFPMIPGIDFAGTVHASEDPRFHAGQEVLLTGWGVGE----NHWGGLAERARVKGDWLVA 111

Query: 199 LPVARPDPEVVAMLTSGLTASI---ALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAG 254
           LP        + + T+G TA +   ALE AG      +V+VT A+GG G  AV L    G
Sbjct: 112 LPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLG 171

Query: 255 NTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFNLC 313
             V A  G E     LK LG +R+++     + + + K+ +    D    +VG  +    
Sbjct: 172 YQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAKV 227

Query: 314 LKALAVYGRLIVIGM 328
           L  +   G +   G+
Sbjct: 228 LAQMNYGGCVAACGL 242

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 71.1 bits (175), Expect = 6e-14
 Identities = 58/265 (21%), Positives = 94/265 (35%), Gaps = 58/265 (21%)

Query: 111 RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG-SRLPFDAGFEAVGLIAAVGDS 169
           R       V  K+++ GV  SD++          ND G S  P   G E VG +  VG  
Sbjct: 36  RRATGEEDVRFKVLYCGVCHSDLHSIK-------NDWGFSMYPLVPGHEIVGEVTEVGSK 88

Query: 170 VNNVKVGTPAAI------------------------------------MTFGSYAEFTMV 193
           V  V VG    +                                    +T+G Y+   + 
Sbjct: 89  VKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVA 148

Query: 194 PSKHILPVARPD---PEVVA-MLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQ 248
             ++I+    PD    +  A +L +G+T    L+  G    GK + +    GG G  AV+
Sbjct: 149 NERYIIRF--PDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGI-VGLGGLGHVAVK 205

Query: 249 LAKLAGNTVVATCGGEHKAQ-LLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG 307
            AK  G+ V        K +  LK  G D  +  + ++      +      D I ++V  
Sbjct: 206 FAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQE----QMQAAAGTLDGIIDTVSA 261

Query: 308 DM-FNLCLKALAVYGRLIVIGMISQ 331
                     L  +G+LI++G   +
Sbjct: 262 VHPLLPLFGLLKSHGKLILVGAPEK 286

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 66.0 bits (162), Expect = 3e-12
 Identities = 55/296 (18%), Positives = 95/296 (32%), Gaps = 79/296 (26%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
              + A           L        + + VLVK++  G+  +D+               
Sbjct: 4   LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQ-------KYP 56

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKV--------------------------------- 175
             LP   G E  G+I A+G +V  ++V                                 
Sbjct: 57  VPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNF 116

Query: 176 --------------GTPAAIMTF---GSYAEFTMVPSKHILPVARPD--PEVVAMLTSGL 216
                                 F    S+A + +    + + V   D   E++  L  G+
Sbjct: 117 SGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV-TKDVPIELLGPLGCGI 175

Query: 217 TASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKEL 273
                  +           +   A G  G  A+  AK+ G + ++A    E + +L K+L
Sbjct: 176 QTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234

Query: 274 GVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGM 328
           G   VIN K +D     KE    G +   ES G  ++    + AL + G++ V+G 
Sbjct: 235 GATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGA 290

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 65.6 bits (161), Expect = 4e-12
 Identities = 59/266 (22%), Positives = 99/266 (37%), Gaps = 58/266 (21%)

Query: 111 RLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG-SRLPFDAGFEAVGLIAAVGDS 169
             P   + + +KI   GV  SD++ ++          G  ++P   G E VG +  +G  
Sbjct: 28  PKPFYDHDIDIKIEACGVCGSDIHCAA-------GHWGNMKMPLVVGHEIVGKVVKLGPK 80

Query: 170 VN-NVKVGTPAAI------------------------------------MTFGSYAEFTM 192
            N  +KVG    +                                    ++ G YA +  
Sbjct: 81  SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVR 140

Query: 193 VPSKHILPVARPD---PEVVA-MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQ 248
           V    ++P+  P+     + A +L  GLT    L + G   GKKV +    GG G     
Sbjct: 141 VHEHFVVPI--PENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGI-VGLGGIGSMGTL 197

Query: 249 LAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYE--SVG 306
           ++K  G           K +   ++G D  I     +    + E++   FD+I    S  
Sbjct: 198 ISKAMGAETYVISRSSRKREDAMKMGADHYIATL--EEGD-WGEKYFDTFDLIVVCASSL 254

Query: 307 GDM-FNLCLKALAVYGRLIVIGMISQ 331
            D+ FN+  KA+ V GR++ I +  Q
Sbjct: 255 TDIDFNIMPKAMKVGGRIVSISIPEQ 280

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 63.0 bits (154), Expect = 3e-11
 Identities = 55/256 (21%), Positives = 78/256 (30%), Gaps = 51/256 (19%)

Query: 114 IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNV 173
             P   +V+ +      SD+      +      IG R     G EAVG +  VG  V + 
Sbjct: 22  PGPFDAIVRPLAVAPCTSDI------HTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDF 75

Query: 174 KVG----TPAAI-----------------------MTFGSY----AEFTMVP----SKHI 198
           K G     PA                                    EF  V     +   
Sbjct: 76  KPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH 135

Query: 199 LPVARPDPEVVA---MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG- 254
           LP   P    V    M+T+G   +   E A    G  V V    G  G  +V  A   G 
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGA---ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGA 191

Query: 255 NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVGG-DMFNL 312
             + A    +H   +  E G   +INYK  DI     +    KG D +  + G    F  
Sbjct: 192 GRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQ 251

Query: 313 CLKALAVYGRLIVIGM 328
            +K +     +  +  
Sbjct: 252 AVKMIKPGSDIGNVNY 267

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 61/301 (20%), Positives = 99/301 (32%), Gaps = 86/301 (28%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            IK +A        PL +      P K + V +KII   V  +D       Y   G D  
Sbjct: 4   VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDA------YTLSGADPE 57

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVG-------TPA---------------------- 179
              P   G    G++ +VG+ V  +K G        P                       
Sbjct: 58  GCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117

Query: 180 --------------------AIMTFGSYAEFTMVPSKHILPVARPD--PEVVAMLTSGLT 217
                                 M   +++E+T+V    +  +  P    + V +L  G++
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGIS 176

Query: 218 ASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELG 274
                A+  A    G    V    GG G   +   K+AG + ++     + K    KE G
Sbjct: 177 TGYGAAVNTAKLEPGSVCAV-FGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFG 235

Query: 275 VDRVINYK--AEDIKTVFKEEFPKGFDIIYESVG-----GDMFNLCLKALAVYGRLIVIG 327
               IN +  ++ I+ V  E    G D  +E +G           C K    +G  +V+G
Sbjct: 236 ATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG---WGVSVVVG 292

Query: 328 M 328
           +
Sbjct: 293 V 293

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 61/299 (20%), Positives = 94/299 (31%), Gaps = 84/299 (28%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            I  +A        PL L      P K + V +KI+ +G+  SD +            I 
Sbjct: 7   DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKE-------IIP 59

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVG-------TPA---------------------- 179
           S+ P   G EAVG++ ++G  V  VK G        P                       
Sbjct: 60  SKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 119

Query: 180 --------------------AIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTAS 219
                                +M   ++ E+T+V    +  +    P    ++  G    
Sbjct: 120 KTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATG 179

Query: 220 I--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVD 276
              A+  A    G    V    GG G  A+   K AG + ++     + K     ELG  
Sbjct: 180 YGAAVNTAKVTPGSTCAV-FGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 238

Query: 277 RVINYKAED--IKTVFKEEFPKGFDIIYESVG-----GDMFNLCLKALAVYGRLIVIGM 328
             +N K  D  I  V  E+   G D   E  G      +            G  +V+G+
Sbjct: 239 ECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCG---SGVTVVLGL 294

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 58/301 (19%), Positives = 105/301 (34%), Gaps = 87/301 (28%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            IK +A        P  +      P K + V +K++  G+  SD +  SG        + 
Sbjct: 6   VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSG-------TLV 58

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVG-------TPA---------------------- 179
           + LP  AG EA G++ ++G+ V  V+ G       TP                       
Sbjct: 59  TPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSM 118

Query: 180 --------------------AIMTFGSYAEFTMVPSKHILPVARPD--PEVVAMLTSGLT 217
                                 +   +++++T+V    +  +       E V ++  G +
Sbjct: 119 PRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI-DAASPLEKVCLIGCGFS 177

Query: 218 ASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELG 274
                A++ A    G    V    GG G   +   K AG   ++     + K    KE+G
Sbjct: 178 TGYGSAVKVAKVTQGSTCAV-FGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236

Query: 275 VDRVINYK--AEDIKTVFKEEFPKGFDIIYESVG-----GDMFNLCLKALAVYGRLIVIG 327
               +N +   + I+ V  E    G D  +E +G         + C +A   YG  +++G
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA---YGVSVIVG 293

Query: 328 M 328
           +
Sbjct: 294 V 294

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 54/301 (17%), Positives = 88/301 (29%), Gaps = 86/301 (28%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            IK +A        PL +          N + +KII  GV  +D+      Y        
Sbjct: 6   VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDL------YHLFEGKHK 59

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVG-------TPA---------------------- 179
              P   G E  G++ +VG  V   + G                                
Sbjct: 60  DGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANE 119

Query: 180 --------------------AIMTFGSYAEFTMVPSKHILPVARPD--PEVVAMLTSGLT 217
                                 +   +++++T+V    +  +  P    + V +L  G++
Sbjct: 120 SPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI-DPSAPLDTVCLLGCGVS 178

Query: 218 ASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELG 274
                A+  A    G    V    G  G  AV     AG   ++A      K +  K  G
Sbjct: 179 TGFGAAVNTAKVEPGSTCAV-FGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG 237

Query: 275 VDRVINYKAED--IKTVFKEEFPKGFDIIYESVG-----GDMFNLCLKALAVYGRLIVIG 327
               +N       I  V  +    G D   E VG      +    CLK    +G  +++G
Sbjct: 238 ATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG---WGVSVLVG 294

Query: 328 M 328
            
Sbjct: 295 W 295

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 46.4 bits (111), Expect = 8e-06
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 21/88 (23%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            IK +A        PL +      P K   V +++I   V  +D+N +            
Sbjct: 6   VIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDP-------KKK 58

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVG 176
           +  P   G E  G++ +VG  V N K G
Sbjct: 59  ALFPVVLGHECAGIVESVGPGVTNFKPG 86

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	362
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.84
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.85
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.71
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.67
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.61
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.57
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.53
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.48
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.44
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.43
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.42
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.39
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.37
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.35
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.28
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.26
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.26
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.25
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.23
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.22
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.22
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.21
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.19
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.19
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.19
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.19
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.17
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.17
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.17
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.16
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.16
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.16
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.15
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.15
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.15
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.15
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.14
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.14
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.14
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.14
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.14
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.14
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.14
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.14
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.14
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.13
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.13
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.13
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.13
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.13
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.12
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.11
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.11
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.11
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.11
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.11
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.1
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.1
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.1
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.1
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.09
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.09
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.09
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.09
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.09
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.09
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.09
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.09
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.08
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.08
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.08
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.08
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.08
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.07
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.07
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.07
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.07
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.07
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.06
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.06
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.06
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.05
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.05
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.05
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.05
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.04
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.04
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.03
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.03
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.03
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	98.03
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.02
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.02
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.02
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.02
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.02
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.02
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	98.02
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.01
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.01
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.01
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.01
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.01
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.01
1spx_A	278	Short-chain reductase family member (5L265); paral	98.01
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.99
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.99
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.99
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.99
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.98
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.98
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.98
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.98
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.98
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.97
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.97
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.97
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.96
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.96
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.96
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.95
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.95
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.94
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.94
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.93
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.93
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.93
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.92
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.92
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.92
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.92
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.91
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.91
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.91
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.91
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.9
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.9
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.9
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.9
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.89
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.88
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.88
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.87
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.87
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.87
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.87
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.86
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.86
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.85
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.85
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.85
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.85
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.85
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.85
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.85
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.84
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.84
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.84
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.83
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.83
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.83
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.83
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.82
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.82
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.82
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.82
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.82
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.82
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.8
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.8
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.8
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.8
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.79
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.79
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.79
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.79
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.78
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.78
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.78
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.77
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.77
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.77
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.76
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.76
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.74
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.74
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.72
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.72
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.72
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.72
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.72
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.71
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.71
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.7
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.7
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.69
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.69
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.69
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.67
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.65
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.64
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.63
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.61
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.6
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.58
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.57
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.57
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.55
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.55
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.54
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.54
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.53
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.53
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.52
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.51
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.5
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.47
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.46
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.43
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.43
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.4
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.39
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.39
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.37
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.35
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.35
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.34
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.34
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	97.34
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.32
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.32
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.31
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.31
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.3
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.29
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.27
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.26
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.25
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.24
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.24
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.22
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.22
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.19
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.19
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.19
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	97.19
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.19
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.16
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	97.15
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.14
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.14
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.13
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.12
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.11
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.11
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.1
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.1
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.08
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.07
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.07
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	97.04
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	97.02
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.02
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.02
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.02
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.02
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.02
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.97
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.91
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.91
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.88
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.88
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.84
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.83
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.81
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.79
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.78
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	96.78
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.77
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.76
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.74
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.72
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.72
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.7
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.68
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.67
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	96.67
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	96.64
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.63
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	96.61
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	96.59
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.59
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.57
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.56
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.56
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	96.55
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.55
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	96.54
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	96.53
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	96.53
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.53
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.53
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.5
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.49
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.48
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.48
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.48
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.47
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	96.46
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	96.46
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	96.45
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.45
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.44
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.44
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.41
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.4
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.4
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.39
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.39
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.39
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.38
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	96.38
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.38
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.34
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.34
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.33
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.31
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.3
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.3
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	96.3
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.3
4f6c_A	427	AUSA reductase domain protein; thioester reductase	96.29
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	96.28
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.28
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.28
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	96.28
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.27
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	96.25
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	96.25
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.25
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	96.24
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.23
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.23
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	96.22
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.22
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.21
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.2
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.17
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	96.16
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	96.14
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.12
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	96.12
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.12
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	96.12
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.12
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.12
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.11
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.11
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.11
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.1
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	96.08
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	96.07
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.07
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.06
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.05
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.04
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.02
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.99
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.99
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.98
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.94
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.94
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.91
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	95.9
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	95.9
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.89
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	95.89
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.87
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.86
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.85
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.84
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.83
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.81
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.81
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.79
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.79
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	95.77
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.77
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.77
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.76
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.76
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.75
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.73
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.72
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	95.71
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.71
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.7
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.69
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.67
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.62
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.62
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.6
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	95.59
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.57
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.57
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.57
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.55
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	95.55
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	95.55
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.55
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	95.54
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	95.53
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.53

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.7e-45  Score=346.03  Aligned_cols=262  Identities=28%  Similarity=0.397  Sum_probs=229.8

Q ss_pred             ccCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           80 NVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        80 ~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      +.++|.+||+++++.++..  +.+++++.+.| +++++||+|||.++|||++|+++..|.++       ..+|+++|||+
T Consensus         2 ~~~~p~~mka~~~~~~g~~--~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-------~~~P~i~G~e~   71 (334)
T 3qwb_A            2 KCTIPEQQKVILIDEIGGY--DVIKYEDYPVP-SISEEELLIKNKYTGVNYIESYFRKGIYP-------CEKPYVLGREA   71 (334)
T ss_dssp             ---CCSEEEEEEESSSSSG--GGEEEEEEECC-CCCTTEEEEEEEEEECCTTHHHHHHTSSC-------CCSSEECCSEE
T ss_pred             CCCCchheEEEEEecCCCC--ceeEEEeccCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCC-------CCCCCccccce
Confidence            3467899999999987642  45888999999 88999999999999999999999999764       34789999999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEee-CCCeeeCCCC--CHH---HHHhhhhHHHHHHHHHHhCC-CCCCE
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVP-SKHILPVARP--DPE---VVAMLTSGLTASIALEQAGP-ASGKK  232 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~-~~~~~~ip~~--~~~---~a~l~~~~~tA~~al~~~~~-~~g~~  232 (362)
                      +|+|+++|++|++|++||||+++.+|+|+||+++| ++.++++|++  +.+   +++++..++|||+++.+... ++|++
T Consensus        72 ~G~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~  151 (334)
T 3qwb_A           72 SGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDY  151 (334)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCE
T ss_pred             EEEEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCE
Confidence            99999999999999999999999999999999999 9999999985  455   57788999999999998876 99999


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHH
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFN  311 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~  311 (362)
                      |||+||+|++|++++|+|+..|++|+++++++++.+.++++|+++++++.++++.+.+.+.+ ++++|++|||+|++.++
T Consensus       152 vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~  231 (334)
T 3qwb_A          152 VLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFE  231 (334)
T ss_dssp             EEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHH
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHH
Confidence            99999999999999999999999999999999999999999999999999988887777765 56899999999999999


Q ss_pred             HHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          312 LCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       312 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .++++|+++|+++.+|..+......+     .    ..+..|++++.|+
T Consensus       232 ~~~~~l~~~G~iv~~G~~~~~~~~~~-----~----~~~~~~~~~~~~~  271 (334)
T 3qwb_A          232 ISLAALKRKGVFVSFGNASGLIPPFS-----I----TRLSPKNITLVRP  271 (334)
T ss_dssp             HHHHHEEEEEEEEECCCTTCCCCCBC-----G----GGGTTTTCEEECC
T ss_pred             HHHHHhccCCEEEEEcCCCCCCCCcc-----h----hhhhhCceEEEEE
Confidence            99999999999999998765332211     1    1366788888865

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=2.3e-45  Score=349.12  Aligned_cols=264  Identities=29%  Similarity=0.415  Sum_probs=234.0

Q ss_pred             cCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceE
Q 018013           81 VQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAV  160 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~  160 (362)
                      .++|.+||+++++.++.+  +.+++++.+.| +++++||+|||.++|||++|++.+.|.++.     ...+|.++|||++
T Consensus        23 ~~~p~~MkA~~~~~~g~~--~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~i~G~E~~   94 (353)
T 4dup_A           23 MSLPQEMRFVDLKSFGGP--DVMVIGKRPLP-VAGEGEVLVRAEAIGVNRPDIAQRQGSYPP-----PKDASPILGLELS   94 (353)
T ss_dssp             CCCCSSEEEEEESSSSSG--GGEEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHHTTSSCC-----CTTSCSSSCCEEE
T ss_pred             CCCChheeEEEEccCCCc--cceEEEeccCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCC-----CCCCCCccccccE
Confidence            368999999999987643  45899999999 899999999999999999999999998753     2457889999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEE
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVT  236 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~  236 (362)
                      |+|+++|++|++|++||||+++. .|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+... ++|++|||+
T Consensus        95 G~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~  174 (353)
T 4dup_A           95 GEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIH  174 (353)
T ss_dssp             EEEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEES
T ss_pred             EEEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            99999999999999999999874 699999999999999999985  56677799999999999977666 999999999


Q ss_pred             cCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHH
Q 018013          237 AAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKA  316 (362)
Q Consensus       237 ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  316 (362)
                      ||+|++|++++|+|+..|++|+++++++++.+.++++|+++++++.+.++.+.+.+.+++++|++|||+|++.++.++++
T Consensus       175 Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  254 (353)
T 4dup_A          175 GGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIAS  254 (353)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGGGHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888877776668899999999999999999999


Q ss_pred             hccCCEEEEEcCcccccCC-CCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          317 LAVYGRLIVIGMISQYQGE-HGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       317 l~~~G~~v~~G~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      |+++|+++.+|..+..... .+         ...++.|++++.|++
T Consensus       255 l~~~G~iv~~g~~~~~~~~~~~---------~~~~~~~~~~i~g~~  291 (353)
T 4dup_A          255 LAKDGCLSIIAFLGGAVAEKVN---------LSPIMVKRLTVTGST  291 (353)
T ss_dssp             EEEEEEEEECCCTTCSEEEEEE---------CHHHHHTTCEEEECC
T ss_pred             hccCCEEEEEEecCCCcccCCC---------HHHHHhcCceEEEEe
Confidence            9999999999987654321 11         125788999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.1e-45  Score=347.95  Aligned_cols=267  Identities=27%  Similarity=0.433  Sum_probs=222.7

Q ss_pred             ccccccCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCC
Q 018013           76 PLNLNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDA  155 (362)
Q Consensus        76 ~~~~~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~  155 (362)
                      +......+|.+||+++++..+.+  +.+++++.+.| +++++||+|||.++|||++|++++.|.++.     ...+|.++
T Consensus        11 ~~~~~~~~p~~MkA~~~~~~g~~--~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~v~   82 (342)
T 4eye_A           11 TLEAQTQGPGSMKAIQAQSLSGP--EGLVYTDVETP-GAGPNVVVVDVKAAGVCFPDYLMTKGEYQL-----KMEPPFVP   82 (342)
T ss_dssp             -------CCCEEEEEEECSSSGG--GGEEEEEEECC-CCCTTCEEEEEEEEECCHHHHHHHTTCSSS-----CCCSSBCC
T ss_pred             CCcccccCCcceEEEEEecCCCC--ceeEEEeCCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCC-----CCCCCCcc
Confidence            34344577999999999876643  34889999999 899999999999999999999999997642     34678999


Q ss_pred             CCceEEEEEEeCCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCC
Q 018013          156 GFEAVGLIAAVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGK  231 (362)
Q Consensus       156 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~  231 (362)
                      |||++|+|+++|++|+ |++||||+++. +|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+... ++|+
T Consensus        83 G~E~~G~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  161 (342)
T 4eye_A           83 GIETAGVVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGE  161 (342)
T ss_dssp             CSEEEEEEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTC
T ss_pred             ceeEEEEEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999 99999999986 799999999999999999985  56677899999999999977776 9999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC-CceeEEEECCChHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVGGDMF  310 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~-~g~Dvvid~~g~~~~  310 (362)
                      +|||+|++|++|++++|+|+..|++|+++++++++.+.++++|+++++++. +++.+.+++.++ +++|++|||+|++.+
T Consensus       162 ~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~  240 (342)
T 4eye_A          162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAF  240 (342)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHH
Confidence            999999999999999999999999999999999999999999999999998 778777777654 589999999999999


Q ss_pred             HHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          311 NLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       311 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ..++++++++|+++.+|.........++.         .++.|++++.|++
T Consensus       241 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~---------~~~~~~~~i~g~~  282 (342)
T 4eye_A          241 DDAVRTLASEGRLLVVGFAAGGIPTIKVN---------RLLLRNASLIGVA  282 (342)
T ss_dssp             HHHHHTEEEEEEEEEC----------CCC---------CGGGTTCEEEECC
T ss_pred             HHHHHhhcCCCEEEEEEccCCCCCccCHH---------HHhhcCCEEEEEe
Confidence            99999999999999999876543221111         2678999999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=3.7e-45  Score=348.80  Aligned_cols=274  Identities=48%  Similarity=0.738  Sum_probs=237.9

Q ss_pred             CCCccceEEEEeccCCCccCceEE-EeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIK-VRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAV  160 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~  160 (362)
                      .+|.+||+++++.++.++.+.+++ ++.|.| +++++||+|||.++|||++|++++.|.++.     ...+|+++|||++
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-----~~~~P~i~G~E~~   92 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDP-----SVKPPFDIGFEGI   92 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEEEEECC-CCCTTEEEEEEEEEECCTTHHHHHTTTTCT-----TCCSCEECCSEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEeecCCC-CCCCCeEEEEEEEeccCHHHHHHhcCCCCC-----CCCCCCCCCceeE
Confidence            457789999999877544456888 999999 789999999999999999999999987632     2457899999999


Q ss_pred             EEEEEeCCCCC-CCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCCCHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcC
Q 018013          161 GLIAAVGDSVN-NVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAA  238 (362)
Q Consensus       161 G~V~~vG~~v~-~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga  238 (362)
                      |+|+++|++|+ +|++||||++...|+|+||+++|++.++++|+...++++++.+++|||+++.+... ++|++|||+||
T Consensus        93 G~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~~P~~~~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga  172 (362)
T 2c0c_A           93 GEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAA  172 (362)
T ss_dssp             EEEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGGCEECSSSCHHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTT
T ss_pred             EEEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHHeEECCCCchHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCC
Confidence            99999999999 99999999999899999999999999999998777888999999999999988776 99999999999


Q ss_pred             CchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhc
Q 018013          239 AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALA  318 (362)
Q Consensus       239 ~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~  318 (362)
                      +|++|++++|+|+..|++|+++++++++.+.++++|+++++++.++++.+.+++..++++|++|||+|+..++.++++++
T Consensus       173 ~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~l~  252 (362)
T 2c0c_A          173 AGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA  252 (362)
T ss_dssp             TBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHEE
T ss_pred             CcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999888888777777778999999999999999999999


Q ss_pred             cCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          319 VYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       319 ~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++|+++.+|..........+.+.....+...++.|++++.|++
T Consensus       253 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~  295 (362)
T 2c0c_A          253 TKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFF  295 (362)
T ss_dssp             EEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECC
T ss_pred             cCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEE
Confidence            9999999998775432111111100112246889999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=6e-45  Score=347.48  Aligned_cols=261  Identities=25%  Similarity=0.340  Sum_probs=228.2

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      .+|.+||+++++.++.   +.+++++.|.| +++++||+|||.++|||++|++++.|.++.     ...+|.++|||++|
T Consensus        23 ~m~~~mkA~~~~~~~~---~~l~~~e~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~P~v~GhE~~G   93 (363)
T 3uog_A           23 MMSKWMQEWSTETVAP---HDLKLAERPVP-EAGEHDIIVRTLAVSLNYRDKLVLETGMGL-----DLAFPFVPASDMSG   93 (363)
T ss_dssp             CCCSEEEEEEBSCTTT---TCCEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHHHCTTC-----CCCSSBCCCCEEEE
T ss_pred             cCchhhEEEEEccCCC---CCcEEEeeeCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCC-----CCCCCcCcccceEE
Confidence            5688899999997632   35899999999 899999999999999999999999987642     35679999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEe-------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhh
Q 018013          162 LIAAVGDSVNNVKVGTPAAIM-------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTS  214 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~-------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~  214 (362)
                      +|+++|++|++|++||||++.                         .+|+|+||+++|++.++++|++  +.++|+++.+
T Consensus        94 ~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  173 (363)
T 3uog_A           94 VVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCA  173 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTH
T ss_pred             EEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccH
Confidence            999999999999999999986                         2499999999999999999985  5667778889


Q ss_pred             HHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH
Q 018013          215 GLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       215 ~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~  293 (362)
                      ++|||+++.+... ++|++|||+| +|++|++++|+|+..|++|+++++++++.+.++++|+++++|...+++.+.+++.
T Consensus       174 ~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~  252 (363)
T 3uog_A          174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYAL  252 (363)
T ss_dssp             HHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHH
Confidence            9999999976666 9999999999 8999999999999999999999999999999999999999996657777776665


Q ss_pred             C-CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          294 F-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       294 ~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      + ++++|++|||+|++.++.++++++++|+++.+|.........++         ..++.|++++.|++
T Consensus       253 ~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~---------~~~~~~~~~i~g~~  312 (363)
T 3uog_A          253 TGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPV---------GPLLLKSPVVQGIS  312 (363)
T ss_dssp             HTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBT---------THHHHTCCEEEECC
T ss_pred             hCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCH---------HHHHhCCcEEEEEe
Confidence            4 56899999999999999999999999999999998764322111         14789999999975

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=8.7e-44  Score=340.21  Aligned_cols=260  Identities=22%  Similarity=0.349  Sum_probs=225.1

Q ss_pred             ccCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           80 NVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        80 ~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      ...+|.+||+++++.++     .+++++.|.| +++++||+|||.++|||++|++++.|.++       ..+|.++|||+
T Consensus        17 ~~~~p~~mkA~v~~~~~-----~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-------~~~p~v~G~e~   83 (370)
T 4ej6_A           17 NLYFQSMMKAVRLESVG-----NISVRNVGIP-EPGPDDLLVKVEACGICGTDRHLLHGEFP-------STPPVTLGHEF   83 (370)
T ss_dssp             ----CCEEEEEEEEETT-----EEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHTTSSC-------CCSSEECCCSE
T ss_pred             ccccchheEEEEEecCC-----ceEEEEccCC-CCCCCeEEEEEEEEeecHHHHHHHcCCCC-------CCCCeecCcce
Confidence            34778999999999765     3899999999 89999999999999999999999998752       45788999999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHH
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVA  210 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~  210 (362)
                      +|+|+++|++|++|++||+|++.                            ..|+|+||+++|++.++++|++ +.+.|+
T Consensus        84 ~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa  163 (370)
T 4ej6_A           84 CGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA  163 (370)
T ss_dssp             EEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG
T ss_pred             EEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh
Confidence            99999999999999999999873                            2599999999999999999985 444556


Q ss_pred             hhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHH
Q 018013          211 MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV  289 (362)
Q Consensus       211 l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~  289 (362)
                      ++.++.+||+++.....++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.++++++|+++++|+.+.++.+.
T Consensus       164 l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  242 (370)
T 4ej6_A          164 FCEPLACCLHGVDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEA  242 (370)
T ss_dssp             GHHHHHHHHHHHHHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHH
T ss_pred             hhhHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHH
Confidence            8889999999997666699999999995 9999999999999999 9999999999999999999999999999888888


Q ss_pred             HHH---HCCCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          290 FKE---EFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       290 ~~~---~~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++   .+++++|+||||+| .+.++.++++|+++|+++.+|........ .+   +    ...++.|++++.|++
T Consensus       243 i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~-~~---~----~~~~~~~~~~i~g~~  310 (370)
T 4ej6_A          243 IAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKV-EI---E----PFDILFRELRVLGSF  310 (370)
T ss_dssp             HHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCC-CC---C----HHHHHHTTCEEEECC
T ss_pred             HHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCcc-cc---C----HHHHHhCCcEEEEec
Confidence            776   55569999999999 57899999999999999999987653221 11   1    336889999999975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2.8e-43  Score=331.07  Aligned_cols=237  Identities=30%  Similarity=0.419  Sum_probs=217.2

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.+  +.+++++.+.| +++++||+|||.++|||++|++++.|.++.      ..+|.++|||++|+|+++
T Consensus         2 MkA~~~~~~g~~--~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~------~~~p~v~G~e~~G~V~~v   72 (325)
T 3jyn_A            2 AKRIQFSTVGGP--EVLEYVDFEPE-APGPQAVVVRNKAIGLNFIDTYYRSGLYPA------PFLPSGLGAEGAGVVEAV   72 (325)
T ss_dssp             EEEEEBSSCSSG--GGCEEEEECCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCC------SSSSBCCCCCEEEEEEEE
T ss_pred             cEEEEEecCCCc--ceeEEeecCCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCCC------CCCCCCCCceeEEEEEEE
Confidence            899999987754  45889999999 899999999999999999999999997642      367899999999999999


Q ss_pred             CCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCch
Q 018013          167 GDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGG  241 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~  241 (362)
                      |++|++|++||+|++..  +|+|+||+++|++.++++|++  +.++++++..++|||+++.+... ++|++|||+||+|+
T Consensus        73 G~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~  152 (325)
T 3jyn_A           73 GDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGG  152 (325)
T ss_dssp             CTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSH
T ss_pred             CCCCCCCCCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcH
Confidence            99999999999999876  799999999999999999985  56777889999999999998877 99999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccC
Q 018013          242 TGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVY  320 (362)
Q Consensus       242 vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~  320 (362)
                      +|++++|+|+..|++|+++++++++.+.++++|+++++|+.+.++.+.+.+.+ ++++|++|||+|++.+..++++++++
T Consensus       153 iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~  232 (325)
T 3jyn_A          153 VGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPR  232 (325)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999988887777665 46899999999999999999999999


Q ss_pred             CEEEEEcCcccc
Q 018013          321 GRLIVIGMISQY  332 (362)
Q Consensus       321 G~~v~~G~~~~~  332 (362)
                      |+++.+|..+..
T Consensus       233 G~iv~~g~~~~~  244 (325)
T 3jyn_A          233 GLVVSFGNASGP  244 (325)
T ss_dssp             EEEEECCCTTCC
T ss_pred             CEEEEEecCCCC
Confidence            999999987753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3e-43  Score=334.60  Aligned_cols=266  Identities=23%  Similarity=0.328  Sum_probs=225.8

Q ss_pred             ccCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           80 NVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        80 ~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      ...+|.+||+++++.++..  +.+++++.+.| +++++||+|||.++|||++|+++..|.++.     ...+|.++|||+
T Consensus        16 ~~~~~~~Mka~~~~~~g~~--~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-----~~~~p~v~G~E~   87 (354)
T 2j8z_A           16 ENLYFQSMLAVHFDKPGGP--ENLYVKEVAKP-SPGEGEVLLKVAASALNRADLMQRQGQYDP-----PPGASNILGLEA   87 (354)
T ss_dssp             -----CEEEEEEESSCSSG--GGEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCC-----CTTSCSSSCSEE
T ss_pred             cccchhheeEEEEccCCCc--cceEEeecCCC-CCCCCeEEEEEEEeecCHHHHHHhCCCCCC-----CCCCCcccceee
Confidence            3467889999999876642  35888999998 789999999999999999999999987642     235789999999


Q ss_pred             EEEEEEeCCCC-CCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEE
Q 018013          160 VGLIAAVGDSV-NNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVL  234 (362)
Q Consensus       160 ~G~V~~vG~~v-~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~Vl  234 (362)
                      +|+|+++|++| ++|++||+|+++. .|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+... ++|++||
T Consensus        88 ~G~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vl  167 (354)
T 2j8z_A           88 SGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVL  167 (354)
T ss_dssp             EEEEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEE
T ss_pred             EEEEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEE
Confidence            99999999999 9999999999875 599999999999999999985  45667888999999999976666 9999999


Q ss_pred             EEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHH
Q 018013          235 VTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLC  313 (362)
Q Consensus       235 I~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~  313 (362)
                      |+||+|++|++++|+++..|++|+++++++++.+.++++|++.++|+.+.++.+.+.+.. ++++|++|||+|+..+..+
T Consensus       168 V~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~  247 (354)
T 2j8z_A          168 IHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKN  247 (354)
T ss_dssp             ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHH
T ss_pred             EECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHH
Confidence            999999999999999999999999999999999999999999999998888777766654 4689999999999999999


Q ss_pred             HHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          314 LKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       314 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++|+++|+++.+|..+.....  +   +.   ...++.|++++.|++
T Consensus       248 ~~~l~~~G~iv~~G~~~~~~~~--~---~~---~~~~~~~~~~i~g~~  287 (354)
T 2j8z_A          248 VNCLALDGRWVLYGLMGGGDIN--G---PL---FSKLLFKRGSLITSL  287 (354)
T ss_dssp             HHHEEEEEEEEECCCTTCSCCC--S---CH---HHHHHHTTCEEEECC
T ss_pred             HHhccCCCEEEEEeccCCCccC--C---Ch---hHHHHhCCCEEEEEE
Confidence            9999999999999987643221  1   11   035788999999974

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3.6e-44  Score=340.31  Aligned_cols=264  Identities=25%  Similarity=0.375  Sum_probs=224.7

Q ss_pred             CCCccceEEEEe--ccCCCccCceEEEec---------cCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCC
Q 018013           82 QLPESFEKLVVH--TLNHNFRDATIKVRA---------PLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSR  150 (362)
Q Consensus        82 ~~p~~~~a~~~~--~~~~~~~~~~~~~~~---------~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~  150 (362)
                      ++|.+||+++++  ..+.. .+.+++++.         +.| +++++||+|||.++|||++|++++.|.++.     ...
T Consensus         6 ~~p~~mka~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-----~~~   78 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKT-PSGSALEAMEPYLEQGRIAVP-APGPSQVLIKVNLASINPSDVAFIKGQYGQ-----PRV   78 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSS-CCCSCCCCSTTTEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHTTCSSS-----CBC
T ss_pred             CCchhheEEEEEccccCCC-cccceEEEeecccccccCCCC-CCCCCeEEEEEEEecCCHHHHHHhcccCCC-----CCC
Confidence            578999999999  33111 123556666         999 899999999999999999999999997642     346


Q ss_pred             CCCCCCCceEEEEEEeCCCC-CCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHH
Q 018013          151 LPFDAGFEAVGLIAAVGDSV-NNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALE  223 (362)
Q Consensus       151 ~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~  223 (362)
                      +|.++|||++|+|+++|++| ++|++||||++..    +|+|+||+++|++.++++|++  +.++|+++..++|||.++.
T Consensus        79 ~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~  158 (349)
T 3pi7_A           79 KGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFD  158 (349)
T ss_dssp             TTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHH
T ss_pred             CCCCccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHH
Confidence            79999999999999999999 9999999999884    799999999999999999985  6778888899999997776


Q ss_pred             HhCCCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC-CceeEE
Q 018013          224 QAGPASG-KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP-KGFDII  301 (362)
Q Consensus       224 ~~~~~~g-~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~-~g~Dvv  301 (362)
                      ... ++| ++|+|+||+|++|++++|+|+..|++|+++++++++.+.++++|+++++|++++++.+.+++.++ +++|++
T Consensus       159 ~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~v  237 (349)
T 3pi7_A          159 IVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIF  237 (349)
T ss_dssp             HHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred             HHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence            665 666 79999999999999999999999999999999999999999999999999998888877776554 689999


Q ss_pred             EECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          302 YESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       302 id~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      |||+|++.+..++++|+++|+++.+|........  +..      ...++.|++++.|++
T Consensus       238 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~--~~~------~~~~~~~~~~i~g~~  289 (349)
T 3pi7_A          238 LDAVTGPLASAIFNAMPKRARWIIYGRLDPDATV--IRE------PGQLIFQHKHIEGFW  289 (349)
T ss_dssp             EESSCHHHHHHHHHHSCTTCEEEECCCSCCSCCC--CSC------THHHHHSCCEEEECC
T ss_pred             EECCCChhHHHHHhhhcCCCEEEEEeccCCCCCC--CCc------hhhhhccccEEEEEE
Confidence            9999998889999999999999999987654332  111      125889999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=3.6e-43  Score=332.70  Aligned_cols=254  Identities=22%  Similarity=0.336  Sum_probs=220.9

Q ss_pred             CCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           83 LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      .|.+||+++++.++.+    +++++.|.| +++++||+|||.++|||++|++++.|.++..    ...+|.++|||++|+
T Consensus         4 ~~~~mka~~~~~~~~~----l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~----~~~~P~v~G~E~~G~   74 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGP----FVLRKLARP-QPAPGQVLVQIEASGTNPLDAKIRAGEAPHA----QQPLPAILGMDLAGT   74 (343)
T ss_dssp             --CEEEEEEECSTTCC----EEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHTTCCGGG----CCCSSBCCCCEEEEE
T ss_pred             CchhheEEEEecCCCc----eEEEeccCC-CCCCCEEEEEEEEEEeCHhhHHHhCCCCCCC----CCCCCcccCcceEEE
Confidence            4678999999987754    889999999 8999999999999999999999999875321    256789999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEec------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEE
Q 018013          163 IAAVGDSVNNVKVGTPAAIMT------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKV  233 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~~------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~V  233 (362)
                      |+++|++|++|++||+|+++.      +|+|+||+++|++.++++|++  +.++++++.+++|||++|.+... ++|++|
T Consensus        75 V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V  154 (343)
T 3gaz_A           75 VVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTV  154 (343)
T ss_dssp             EEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             EEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEE
Confidence            999999999999999999984      699999999999999999985  56777788999999999966666 999999


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNL  312 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~  312 (362)
                      ||+||+|++|++++|+|+..|++|+++ .++++.+.++++|++. ++ .+.++.+.+.+. .++++|++|||+|++.++.
T Consensus       155 lV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~  231 (343)
T 3gaz_A          155 LIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDA  231 (343)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHH
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHH
Confidence            999999999999999999999999999 7899999999999998 77 666776666554 4578999999999999999


Q ss_pred             HHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          313 CLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       313 ~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++|+++|+++.+|......         .    ..+..|++++.|++
T Consensus       232 ~~~~l~~~G~iv~~g~~~~~~---------~----~~~~~~~~~~~g~~  267 (343)
T 3gaz_A          232 SFSAVKRFGHVVSCLGWGTHK---------L----APLSFKQATYSGVF  267 (343)
T ss_dssp             HHHHEEEEEEEEESCCCSCCC---------C----HHHHHTTCEEEECC
T ss_pred             HHHHHhcCCeEEEEcccCccc---------c----chhhhcCcEEEEEE
Confidence            999999999999999876211         1    24778999999864

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=4e-43  Score=336.65  Aligned_cols=238  Identities=20%  Similarity=0.274  Sum_probs=214.5

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      .+|.+|||++++.++.+    +++++.+.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||++|
T Consensus         4 ~~~~tmkA~v~~~~~~~----l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~P~v~GhE~~G   72 (378)
T 3uko_A            4 GQVITCKAAVAYEPNKP----LVIEDVQVA-PPQAGEVRIKILYTALCHTDAYTWSGKDP------EGLFPCILGHEAAG   72 (378)
T ss_dssp             TSCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEEECHHHHHHHTTCCT------TCCSSBCCCCEEEE
T ss_pred             ccceeeEEEEEecCCCc----cEEEEecCC-CCCCCeEEEEEEEeecCHHHHHHhcCCCC------CCCCCccCCccceE
Confidence            56888999999987654    789999999 89999999999999999999999998754      35679999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEecC--------------------------------------------------CCeeeEE
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMTF--------------------------------------------------GSYAEFT  191 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~~--------------------------------------------------g~~~~~~  191 (362)
                      +|+++|++|++|++||||++...                                                  |+|+||+
T Consensus        73 ~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~  152 (378)
T 3uko_A           73 IVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYT  152 (378)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEE
T ss_pred             EEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEE
Confidence            99999999999999999987532                                                  6999999


Q ss_pred             EeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHH
Q 018013          192 MVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKA  267 (362)
Q Consensus       192 ~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~  267 (362)
                      ++|++.++++|++  +.+++.++.++.|||+++.+... ++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+
T Consensus       153 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~  231 (378)
T 3uko_A          153 VVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKY  231 (378)
T ss_dssp             EEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHH
T ss_pred             EechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            9999999999985  56677788899999999977776 99999999995 9999999999999999 899999999999


Q ss_pred             HHHHHcCCcEEEeCC--CccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCccc
Q 018013          268 QLLKELGVDRVINYK--AEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQ  331 (362)
Q Consensus       268 ~~l~~~g~~~v~~~~--~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~  331 (362)
                      ++++++|+++++++.  +.++.+.+++.+++++|+||||+|+ +.++.++++++++ |+++.+|....
T Consensus       232 ~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~  299 (378)
T 3uko_A          232 ETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS  299 (378)
T ss_dssp             HHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT
T ss_pred             HHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCC
Confidence            999999999999988  5788888888776699999999997 6899999999996 99999998654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.3e-43  Score=333.43  Aligned_cols=256  Identities=20%  Similarity=0.205  Sum_probs=219.8

Q ss_pred             CccceEEEEeccCC-CccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           84 PESFEKLVVHTLNH-NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        84 p~~~~a~~~~~~~~-~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      .++|||++++.++. .....+++++.|.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||++|+
T Consensus        20 m~~MkA~~~~~~~~~~~~~~l~~~~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~p~v~G~E~~G~   92 (363)
T 4dvj_A           20 FQSMKAVGYNKPAPITDDASLLDIELPKP-APAGHDILVEVKAVSVNPVDYKVRRSTPP------DGTDWKVIGYDAAGI   92 (363)
T ss_dssp             CCEEEEEEBSSCCCTTSTTSSEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHHHCCC--------CCSBCCCCCEEEE
T ss_pred             hheeEEEEEeccCCCCCCceEEEeecCCC-CCCCCEEEEEEEEEEeCHHHHHHHcCCCC------CCCCCCcccceeEEE
Confidence            46799999987632 11245889999999 89999999999999999999999998764      246788999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-C-----CC
Q 018013          163 IAAVGDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-A-----SG  230 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~-----~g  230 (362)
                      |+++|++|++|++||||+++.    +|+|+||+++|++.++++|++  +.++|+++.+++|||++|.+... +     +|
T Consensus        93 V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g  172 (363)
T 4dvj_A           93 VSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAA  172 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSE
T ss_pred             EEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCC
Confidence            999999999999999999874    699999999999999999985  56777888899999999977766 6     89


Q ss_pred             CEEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      ++|||+||+|++|++++|+|+. .|++|++++++++|.++++++|+++++|+.+ ++.+.+++..++++|+||||+|+. 
T Consensus       173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~~~~g~Dvvid~~g~~~  251 (363)
T 4dvj_A          173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAALGLGAPAFVFSTTHTDK  251 (363)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTTCSCCEEEEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHhcCCCceEEEECCCchh
Confidence            9999999999999999999998 5889999999999999999999999999875 677777767778999999999974 


Q ss_pred             HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          309 MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       309 ~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .++.++++|+++|+++.+|....      +.   +    ..+..|++++.|+
T Consensus       252 ~~~~~~~~l~~~G~iv~~g~~~~------~~---~----~~~~~k~~~i~~~  290 (363)
T 4dvj_A          252 HAAEIADLIAPQGRFCLIDDPSA------FD---I----MLFKRKAVSIHHE  290 (363)
T ss_dssp             HHHHHHHHSCTTCEEEECSCCSS------CC---G----GGGTTTTCEEEEC
T ss_pred             hHHHHHHHhcCCCEEEEECCCCc------cc---h----HHHhhccceEEEE
Confidence            88999999999999999975322      11   1    1366788888775

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=3.3e-43  Score=336.40  Aligned_cols=235  Identities=19%  Similarity=0.303  Sum_probs=208.3

Q ss_pred             cCCCccceEEEEeccCCCccCceEEE-eccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           81 VQLPESFEKLVVHTLNHNFRDATIKV-RAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~~~~~~~~~~-~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      +++|.+||+++++.++.     ++++ +.+.| +++++||+|||.++|||++|++++.|.         ...|.++|||+
T Consensus         6 m~~p~~mkA~v~~~~~~-----l~~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~---------~~~p~v~G~e~   70 (371)
T 3gqv_A            6 FIPPPQQTALTVNDHDE-----VTVWNAAPCP-MLPRDQVYVRVEAVAINPSDTSMRGQF---------ATPWAFLGTDY   70 (371)
T ss_dssp             CCCCSCEEEEEECTTSC-----EEEEEEECCC-CCCTTSEEEEEEEEECCGGGGC--------------CCTTSCCCSEE
T ss_pred             CCCchhceeEEEcCCCc-----eEEeccCCCC-CCCCCEEEEEEEEEEcCHHHHHHhhcC---------CCCCccCcccc
Confidence            46889999999997643     8888 99999 889999999999999999999988662         23588999999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEec---------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHh-CC
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIMT---------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQA-GP  227 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~~---------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~-~~  227 (362)
                      +|+|+++|++|++|++||||++..         +|+|+||+++|++.++++|++  +.++++++.++.|||++|.+. ..
T Consensus        71 ~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~  150 (371)
T 3gqv_A           71 AGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLP  150 (371)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCC
T ss_pred             EEEEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccC
Confidence            999999999999999999999875         699999999999999999985  567777888999999999776 33


Q ss_pred             ------------CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          228 ------------ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       228 ------------~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                                  ++|++|||+|++|++|++++|+|+..|++|++++ +++|.++++++|+++++|+++.++.+.+++.++
T Consensus       151 ~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~  229 (371)
T 3gqv_A          151 LPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTK  229 (371)
T ss_dssp             CCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTT
T ss_pred             CCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHcc
Confidence                        8999999999889999999999999999999997 688999999999999999999999888888877


Q ss_pred             CceeEEEECCCh-HHHHHHHHHh-ccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGG-DMFNLCLKAL-AVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l-~~~G~~v~~G~~~~  331 (362)
                      +++|++|||+|+ ..++.++++| +++|+++.+|....
T Consensus       230 g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~  267 (371)
T 3gqv_A          230 NNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPE  267 (371)
T ss_dssp             TCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC
T ss_pred             CCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCcc
Confidence            779999999997 6799999999 59999999997654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=8.4e-43  Score=329.78  Aligned_cols=254  Identities=24%  Similarity=0.326  Sum_probs=222.8

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      +|||++++.++.+    +++++.+.| +++++||+|||.++|||++|++++.|.++.     ...+|.++|||++|+|++
T Consensus         2 ~MkA~~~~~~g~~----l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~P~v~G~E~~G~V~~   71 (340)
T 3s2e_A            2 MMKAAVVRAFGAP----LTIDEVPVP-QPGPGQVQVKIEASGVCHTDLHAADGDWPV-----KPTLPFIPGHEGVGYVSA   71 (340)
T ss_dssp             EEEEEEBCSTTSC----CEEEEEECC-CCCTTCEEEEEEEEEECHHHHHHHHTCSSS-----CCCSSBCCCSEEEEEEEE
T ss_pred             ceEEEEEecCCCC----CEEEEccCC-CCCCCeEEEEEEEeccCHHHHHHHcCCCCC-----CCCCCcccCCcceEEEEE
Confidence            5999999876643    789999999 899999999999999999999999997642     246899999999999999


Q ss_pred             eCCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhh
Q 018013          166 VGDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTS  214 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~  214 (362)
                      +|++|++|++||||+..                             .+|+|+||+++|++.++++|++  +.++|+++.+
T Consensus        72 vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  151 (340)
T 3s2e_A           72 VGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCA  151 (340)
T ss_dssp             ECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTH
T ss_pred             ECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccch
Confidence            99999999999999532                             2599999999999999999985  5677789999


Q ss_pred             HHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          215 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       215 ~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      +.|||+++.....++|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++++|+++++|+++.++.+.+.++.
T Consensus       152 ~~ta~~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~  230 (340)
T 3s2e_A          152 GVTVYKGLKVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEI  230 (340)
T ss_dssp             HHHHHHHHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHH
T ss_pred             hHHHHHHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhC
Confidence            99999999766559999999998 49999999999999999999999999999999999999999999988888777754


Q ss_pred             CCceeEEEECCC-hHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          295 PKGFDIIYESVG-GDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       295 ~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      + ++|++||++| ++.++.++++|+++|+++.+|.......          .....++.|++++.|++
T Consensus       231 g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~----------~~~~~~~~~~~~i~g~~  287 (340)
T 3s2e_A          231 G-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFG----------TPIFDVVLKGITIRGSI  287 (340)
T ss_dssp             S-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEE----------EEHHHHHHTTCEEEECC
T ss_pred             C-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCC----------CCHHHHHhCCeEEEEEe
Confidence            5 8999999998 5789999999999999999998663211          11335788999999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.9e-43  Score=330.92  Aligned_cols=261  Identities=25%  Similarity=0.337  Sum_probs=222.9

Q ss_pred             cCCCccceEEEEeccCCCccCceEE-EeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           81 VQLPESFEKLVVHTLNHNFRDATIK-VRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      ...|.+||+++++..+..  +.+++ ++.+.| +++++||+|||.++|||++|+++..|.++.     ...+|.++|||+
T Consensus        24 ~~~~~~Mka~~~~~~g~~--~~l~~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-----~~~~P~v~G~E~   95 (351)
T 1yb5_A           24 ATGQKLMRAVRVFEFGGP--EVLKLRSDIAVP-IPKDHQVLIKVHACGVNPVETYIRSGTYSR-----KPLLPYTPGSDV   95 (351)
T ss_dssp             ----CEEEEEEESSCSSG--GGEEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSC-----CCCSSBCCCSCE
T ss_pred             ccCcceEEEEEEccCCCc--ceeEEeeecCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCC-----CCCCCCcCCcee
Confidence            345778999999876633  35788 788988 789999999999999999999999987532     245789999999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEE
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVL  234 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~Vl  234 (362)
                      +|+|+++|++|++|++||||++..  .|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+... ++|++||
T Consensus        96 ~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vl  175 (351)
T 1yb5_A           96 AGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVL  175 (351)
T ss_dssp             EEEEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             EEEEEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEE
Confidence            999999999999999999999876  599999999999999999985  45667788999999999986666 9999999


Q ss_pred             EEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHH
Q 018013          235 VTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLC  313 (362)
Q Consensus       235 I~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~  313 (362)
                      |+|++|++|++++|+++..|++|+++++++++.+.++++|+++++|+.+.++.+.+.+. .++++|++|||+|++.+..+
T Consensus       176 V~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~  255 (351)
T 1yb5_A          176 VHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKD  255 (351)
T ss_dssp             EETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred             EECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHH
Confidence            99999999999999999999999999999999999999999999999887777666554 45689999999999889999


Q ss_pred             HHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          314 LKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       314 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +++++++|+++.+|..+..    .+.       ...++.|++++.|+
T Consensus       256 ~~~l~~~G~iv~~g~~~~~----~~~-------~~~~~~~~~~i~g~  291 (351)
T 1yb5_A          256 LSLLSHGGRVIVVGSRGTI----EIN-------PRDTMAKESSIIGV  291 (351)
T ss_dssp             HHHEEEEEEEEECCCCSCE----EEC-------THHHHTTTCEEEEC
T ss_pred             HHhccCCCEEEEEecCCCC----ccC-------HHHHHhCCcEEEEE
Confidence            9999999999999964321    111       12467899999987

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=5.8e-43  Score=330.87  Aligned_cols=241  Identities=22%  Similarity=0.324  Sum_probs=216.8

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEE
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      +++||+++++.++. +.+.+++++.+.| +++++||+|||.++|||++|++++.|.++.     ...+|.++|||++|+|
T Consensus         2 ~~~mka~~~~~~g~-p~~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~i~G~E~~G~V   74 (340)
T 3gms_A            2 SLHGKLIQFHKFGN-PKDVLQVEYKNIE-PLKDNEVFVRMLVRPINPSDLIPITGAYAH-----RIPLPNIPGYEGVGIV   74 (340)
T ss_dssp             CCEEEEEEESSCSC-HHHHEEEEEEECC-CCCTTEEEEEEEEEECCHHHHGGGGTTTTT-----TSCSSBCCCSCCEEEE
T ss_pred             CcccEEEEEecCCC-chheEEEEecCCC-CCCCCEEEEEEEEecCCHHHHHHhcCCCCC-----CCCCCCcCCcceEEEE
Confidence            45799999998774 2245889999999 899999999999999999999999997653     2467899999999999


Q ss_pred             EEeCCCCCCCCCCCeEEEe-cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCC
Q 018013          164 AAVGDSVNNVKVGTPAAIM-TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAA  239 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~-~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~  239 (362)
                      +++|++|++|++||||+++ ..|+|+||+++|++.++++|++  +.++|+++..++|||+++.+... ++|++|||+|++
T Consensus        75 ~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~  154 (340)
T 3gms_A           75 ENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACG  154 (340)
T ss_dssp             EEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             EEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCc
Confidence            9999999999999999987 5799999999999999999985  56666778999999999987777 999999999988


Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhc
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALA  318 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~  318 (362)
                      |++|++++|+|+..|++|+++++++++.+.++++|+++++|+.+.++.+.+.+.+ ++++|++|||+|+......+++|+
T Consensus       155 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~  234 (340)
T 3gms_A          155 SAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLR  234 (340)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEE
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhc
Confidence            8999999999999999999999999999999999999999999888887777665 458999999999988888889999


Q ss_pred             cCCEEEEEcCccc
Q 018013          319 VYGRLIVIGMISQ  331 (362)
Q Consensus       319 ~~G~~v~~G~~~~  331 (362)
                      ++|+++.+|..+.
T Consensus       235 ~~G~iv~~G~~~~  247 (340)
T 3gms_A          235 PNGHFLTIGLLSG  247 (340)
T ss_dssp             EEEEEEECCCTTS
T ss_pred             CCCEEEEEeecCC
Confidence            9999999998765

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-42  Score=331.97  Aligned_cols=258  Identities=22%  Similarity=0.293  Sum_probs=222.0

Q ss_pred             CCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           83 LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      .|.+||+++++.++.+    +++++.+.| +++++||+|||.++|||++|++++.|.++       ..+|.++|||++|+
T Consensus         3 ~~~~mka~~~~~~g~~----l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~P~v~GhE~~G~   70 (371)
T 1f8f_A            3 ELKDIIAAVTPCKGAD----FELQALKIR-QPQGDEVLVKVVATGMCHTDLIVRDQKYP-------VPLPAVLGHEGSGI   70 (371)
T ss_dssp             -CEEEEEEEBCSTTCC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSSC-------CCSSBCCCCEEEEE
T ss_pred             ccccceEEEEcCCCCC----eEEEEecCC-CCCCCEEEEEEEEeecCchhHHHHcCCCC-------CCCCcccCcccceE
Confidence            3567999999876533    788899999 78999999999999999999999998653       34689999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEe--------------------------------------------------cCCCeeeEEE
Q 018013          163 IAAVGDSVNNVKVGTPAAIM--------------------------------------------------TFGSYAEFTM  192 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~--------------------------------------------------~~g~~~~~~~  192 (362)
                      |+++|++|++|++||||++.                                                  ..|+|+||++
T Consensus        71 V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~  150 (371)
T 1f8f_A           71 IEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYAL  150 (371)
T ss_dssp             EEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEE
T ss_pred             EEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEE
Confidence            99999999999999999862                                                  1489999999


Q ss_pred             eeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHH
Q 018013          193 VPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQ  268 (362)
Q Consensus       193 v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~  268 (362)
                      +|++.++++|++  +.++|+++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+
T Consensus       151 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~  229 (371)
T 1f8f_A          151 SRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLE  229 (371)
T ss_dssp             EEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHH
T ss_pred             echhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence            999999999985  56677788899999999976666 9999999999 69999999999999999 7999999999999


Q ss_pred             HHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHH
Q 018013          269 LLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLC  347 (362)
Q Consensus       269 ~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~  347 (362)
                      +++++|+++++++++.++.+.+++.+++++|+|||++|+ +.++.++++|+++|+++.+|....... ..+   +    .
T Consensus       230 ~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~-~~~---~----~  301 (371)
T 1f8f_A          230 LAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTT-AQF---D----V  301 (371)
T ss_dssp             HHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCC-CCC---C----H
T ss_pred             HHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCc-ccc---C----H
Confidence            999999999999998888877777665599999999996 688999999999999999998763211 011   1    2


Q ss_pred             HHHHhcCeEEEEec
Q 018013          348 EKILAKSQTVVCIH  361 (362)
Q Consensus       348 ~~~~~k~~~i~G~~  361 (362)
                      ..++.|++++.|++
T Consensus       302 ~~~~~~~~~i~g~~  315 (371)
T 1f8f_A          302 NDLLLGGKTILGVV  315 (371)
T ss_dssp             HHHHHTTCEEEECS
T ss_pred             HHHHhCCCEEEEeC
Confidence            25778999999974

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=3.4e-43  Score=334.65  Aligned_cols=265  Identities=21%  Similarity=0.253  Sum_probs=217.0

Q ss_pred             ccCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           80 NVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        80 ~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      ...+|.+||+++++.++.+ .+.+++++.+.| +++++||+|||.++|||++|++.+.|.++.     ...+|.++|||+
T Consensus        20 ~~~m~~~mka~~~~~~g~~-~~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-----~~~~P~v~G~E~   92 (357)
T 1zsy_A           20 FQSMPARVRALVYGHHGDP-AKVVELKNLELA-AVRGSDVRVKMLAAPINPSDINMIQGNYGL-----LPELPAVGGNEG   92 (357)
T ss_dssp             CCCCCCCEEEEEESSSSCH-HHHEEEEEECCC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSC-----CCCSSEECCSCC
T ss_pred             hhhCchhhEEEEEecCCCc-cceEEEeeccCC-CCCCCEEEEEEEECCCCHHHhhHhcCCCCC-----CCCCCccccceE
Confidence            3467889999999877632 234788899998 889999999999999999999999987642     235788999999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEE
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVL  234 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~Vl  234 (362)
                      +|+|+++|++|++|++||||++..  .|+|+||+++|++.++++|++  +.++|+++..++|||+++.+... ++|++||
T Consensus        93 ~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  172 (357)
T 1zsy_A           93 VAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVI  172 (357)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEE
T ss_pred             EEEEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEE
Confidence            999999999999999999999875  599999999999999999985  56667777889999999988766 9999999


Q ss_pred             EEcCCchHHHHHHHHHHHCCCEEEEecCCH----hHHHHHHHcCCcEEEeCCCccHHHHHHHHC-C-CceeEEEECCChH
Q 018013          235 VTAAAGGTGQFAVQLAKLAGNTVVATCGGE----HKAQLLKELGVDRVINYKAEDIKTVFKEEF-P-KGFDIIYESVGGD  308 (362)
Q Consensus       235 I~ga~g~vG~~aiqla~~~G~~Vi~~~~~~----~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~-~g~Dvvid~~g~~  308 (362)
                      |+|++|++|++++|+|+.+|+++++++++.    ++.++++++|+++++++.+.+ .+.+.+.. + .++|+||||+|++
T Consensus       173 V~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~~~Dvvid~~g~~  251 (357)
T 1zsy_A          173 QNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR-RPEMKNFFKDMPQPRLALNCVGGK  251 (357)
T ss_dssp             ESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH-SGGGGGTTSSSCCCSEEEESSCHH
T ss_pred             EeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch-HHHHHHHHhCCCCceEEEECCCcH
Confidence            999999999999999999999988887653    356788999999999875321 11222222 2 2699999999998


Q ss_pred             HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          309 MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       309 ~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ....++++++++|+++.+|..+.....  +   +    ...++.|++++.|++
T Consensus       252 ~~~~~~~~l~~~G~iv~~G~~~~~~~~--~---~----~~~~~~~~~~i~g~~  295 (357)
T 1zsy_A          252 SSTELLRQLARGGTMVTYGGMAKQPVV--A---S----VSLLIFKDLKLRGFW  295 (357)
T ss_dssp             HHHHHHTTSCTTCEEEECCCCTTCCBC--C---C----HHHHHHSCCEEEECC
T ss_pred             HHHHHHHhhCCCCEEEEEecCCCCCCC--C---C----HHHHHhcCceEEEEE
Confidence            778899999999999999876532211  1   1    124778999999974

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=3.3e-42  Score=326.47  Aligned_cols=254  Identities=22%  Similarity=0.280  Sum_probs=218.7

Q ss_pred             ccceEEEEeccCC-CccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEE
Q 018013           85 ESFEKLVVHTLNH-NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        85 ~~~~a~~~~~~~~-~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      ++|||++++.++. ...+.+++++.|.| +++++||+|||.++|||++|++.+.|.        ...+|.++|||++|+|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~--------~~~~p~i~G~e~~G~V   71 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIP-EPKVHEILVKIQSISVNPVDTKQRLMD--------VSKAPRVLGFDAIGVV   71 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHTTSC--------CSSSCBCCCCCEEEEE
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCC-CCCCCEEEEEEEEEEcCHHHHHHHhCC--------CCCCCcCcCCccEEEE
Confidence            3699999998651 11246899999999 899999999999999999999998875        2457889999999999


Q ss_pred             EEeCCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-C------CC
Q 018013          164 AAVGDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-A------SG  230 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~------~g  230 (362)
                      +++|++|++|++||+|+++.    +|+|+||+++|++.++++|++  +.++++++.+++|||++|.+... +      +|
T Consensus        72 ~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g  151 (346)
T 3fbg_A           72 ESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEG  151 (346)
T ss_dssp             EEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTT
T ss_pred             EEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCC
Confidence            99999999999999999874    699999999999999999985  56777888999999999987776 6      89


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-H
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-M  309 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~  309 (362)
                      ++|||+||+|++|++++|+|+..|++|+++++++++.+.++++|+++++++++ ++.+.+++..++++|++|||+|+. .
T Consensus       152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~  230 (346)
T 3fbg_A          152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQGIELVDYVFCTFNTDMY  230 (346)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHHTCCCEEEEEESSCHHHH
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHhCCCCccEEEECCCchHH
Confidence            99999998999999999999999999999999999999999999999999875 566767767777999999999974 5


Q ss_pred             HHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          310 FNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       310 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++.++++|+++|+++.+|.....     +   ++    ..+..|++++.|+
T Consensus       231 ~~~~~~~l~~~G~iv~~~~~~~~-----~---~~----~~~~~~~~~~~~~  269 (346)
T 3fbg_A          231 YDDMIQLVKPRGHIATIVAFEND-----Q---DL----NALKPKSLSFSHE  269 (346)
T ss_dssp             HHHHHHHEEEEEEEEESSCCSSC-----B---CG----GGGTTTTCEEEEC
T ss_pred             HHHHHHHhccCCEEEEECCCCCC-----C---cc----ccccccceEEEEE
Confidence            79999999999999998753211     1   11    1356788888875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.8e-42  Score=330.20  Aligned_cols=257  Identities=21%  Similarity=0.216  Sum_probs=219.2

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      ++|.+||+++++.++..    +++++.|.| +++++||+|||.++|||++|++++.|.++       ..+|.++|||++|
T Consensus         5 ~~p~~mka~~~~~~g~~----l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~P~v~GhE~~G   72 (373)
T 1p0f_A            5 GKDITCKAAVAWEPHKP----LSLETITVA-PPKAHEVRIKILASGICGSDSSVLKEIIP-------SKFPVILGHEAVG   72 (373)
T ss_dssp             TSCEEEEEEEBSSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSSC-------CCSSBCCCCCEEE
T ss_pred             CCcceeEEEEEEcCCCC----eeEEEeeCC-CCCCCeEEEEEeEEeecchhHHHhcCCCC-------CCCCcccCcCceE
Confidence            46788999999876533    788899999 88999999999999999999999988653       3568899999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEE
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTM  192 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~  192 (362)
                      +|+++|++|++|++||||++..                                                 .|+|+||++
T Consensus        73 ~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~  152 (373)
T 1p0f_A           73 VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTV  152 (373)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEE
T ss_pred             EEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEE
Confidence            9999999999999999998752                                                 389999999


Q ss_pred             eeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHH
Q 018013          193 VPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQ  268 (362)
Q Consensus       193 v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~  268 (362)
                      +|++.++++|++  +. +|+++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|++++++++|.+
T Consensus       153 v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  230 (373)
T 1p0f_A          153 VADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFP  230 (373)
T ss_dssp             EETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             EchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence            999999999985  45 66777899999999977666 9999999999 59999999999999999 8999999999999


Q ss_pred             HHHHcCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCChh
Q 018013          269 LLKELGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSNYP  344 (362)
Q Consensus       269 ~l~~~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~  344 (362)
                      +++++|+++++|+.+  +++.+.+++.+++++|+|||++|+ +.++.++++++++ |+++.+|....... ..+.     
T Consensus       231 ~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~-~~~~-----  304 (373)
T 1p0f_A          231 KAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNER-LPLD-----  304 (373)
T ss_dssp             HHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCC-EEEC-----
T ss_pred             HHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCc-cccC-----
Confidence            999999999999875  567777777666699999999996 7899999999999 99999998654111 0111     


Q ss_pred             hHHHHHHhcCeEEEEec
Q 018013          345 GLCEKILAKSQTVVCIH  361 (362)
Q Consensus       345 ~~~~~~~~k~~~i~G~~  361 (362)
                        ...++.|+ ++.|++
T Consensus       305 --~~~~~~~~-~i~g~~  318 (373)
T 1p0f_A          305 --PLLLLTGR-SLKGSV  318 (373)
T ss_dssp             --THHHHTTC-EEEECS
T ss_pred             --HHHhccCc-eEEeec
Confidence              12355677 888863

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.1e-43  Score=334.89  Aligned_cols=262  Identities=19%  Similarity=0.214  Sum_probs=217.5

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCCCC--CCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCC---------
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLPIK--PNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLP---------  152 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~--~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p---------  152 (362)
                      |.+||+++++.++.+ .+.+++++.+.| ++.  ++||+|||.++|||++|++++.|.++.     ...+|         
T Consensus         1 ~~~mka~~~~~~g~~-~~~l~~~~~~~P-~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~P~~~~~~~p~   73 (364)
T 1gu7_A            1 MITAQAVLYTQHGEP-KDVLFTQSFEID-DDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS-----KPAKTTGFGTTEPA   73 (364)
T ss_dssp             CEEEEEEEESSCSCH-HHHCEEEEEEEC-TTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC-----CCCCBSTTCCSSCB
T ss_pred             CceEEEEEeccCCCc-hheeEEeeccCC-CCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC-----CCCCCccccccCcc
Confidence            357999999876631 123778888888 555  999999999999999999999987642     12345         


Q ss_pred             CCCCCceEEEEEEeCCCCCCCCCCCeEEEe--cCCCeeeEEEeeCCCeeeCCC-----------C--CHHHHHhhhhHHH
Q 018013          153 FDAGFEAVGLIAAVGDSVNNVKVGTPAAIM--TFGSYAEFTMVPSKHILPVAR-----------P--DPEVVAMLTSGLT  217 (362)
Q Consensus       153 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--~~g~~~~~~~v~~~~~~~ip~-----------~--~~~~a~l~~~~~t  217 (362)
                      .++|||++|+|+++|++|++|++||+|++.  ..|+|+||+++|++.++++|+           +  +.++|+++.+++|
T Consensus        74 ~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~t  153 (364)
T 1gu7_A           74 APCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT  153 (364)
T ss_dssp             EECCSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHH
T ss_pred             cccCceeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHH
Confidence            789999999999999999999999999987  469999999999999999997           4  4566677778999


Q ss_pred             HHHHHHHhCC-CCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH----HHHHHHcCCcEEEeCCC---ccHHH
Q 018013          218 ASIALEQAGP-ASG-KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK----AQLLKELGVDRVINYKA---EDIKT  288 (362)
Q Consensus       218 A~~al~~~~~-~~g-~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~----~~~l~~~g~~~v~~~~~---~~~~~  288 (362)
                      ||+++.+... ++| ++|||+|++|++|++++|+|+.+|++|++++++.++    .+.++++|+++++++++   .++.+
T Consensus       154 a~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~  233 (364)
T 1gu7_A          154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP  233 (364)
T ss_dssp             HHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred             HHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHH
Confidence            9999998765 999 999999999999999999999999999999876554    67788999999999875   56666


Q ss_pred             HHHHHC---CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          289 VFKEEF---PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       289 ~~~~~~---~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+++.+   ++++|+||||+|+.....++++++++|+++.+|..+.....  +   +    ...++.|++++.|++
T Consensus       234 ~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~---~----~~~~~~~~~~~~g~~  300 (364)
T 1gu7_A          234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVT--I---P----TSLYIFKNFTSAGFW  300 (364)
T ss_dssp             HHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEE--E---C----HHHHHHSCCEEEECC
T ss_pred             HHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcc--c---C----HHHHhhcCcEEEEEc
Confidence            666554   67899999999987777899999999999999987642211  1   1    225778999999974

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.5e-42  Score=330.50  Aligned_cols=259  Identities=20%  Similarity=0.218  Sum_probs=220.8

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      .+|++||+++++.++..    +++++.+.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||++|
T Consensus         2 ~~p~~mkA~~~~~~~~~----l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~P~v~GhE~~G   70 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKP----LSIEEIEVA-PPKAHEVRIKIIATAVCHTDAYTLSGADP------EGCFPVILGHLGAG   70 (373)
T ss_dssp             CCCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTCCT------TCCSSBCCCCEEEE
T ss_pred             CCccceEEEEEecCCCC----cEEEEeeCC-CCCCCEEEEEEEEEEEchhhHHHhcCCCC------CCCCCccccccccE
Confidence            46788999999876633    788899998 78999999999999999999999988653      23578999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEE
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTM  192 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~  192 (362)
                      +|+++|++|++|++||||++..                                                 .|+|+||++
T Consensus        71 ~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~  150 (373)
T 2fzw_A           71 IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTV  150 (373)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEE
T ss_pred             EEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEE
Confidence            9999999999999999998752                                                 389999999


Q ss_pred             eeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHH
Q 018013          193 VPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQ  268 (362)
Q Consensus       193 v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~  268 (362)
                      +|++.++++|++  +.++|+++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+
T Consensus       151 v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~  229 (373)
T 2fzw_A          151 VADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFA  229 (373)
T ss_dssp             EEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             EchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            999999999985  46667778899999999977666 9999999999 59999999999999999 8999999999999


Q ss_pred             HHHHcCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCChh
Q 018013          269 LLKELGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSNYP  344 (362)
Q Consensus       269 ~l~~~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~  344 (362)
                      .++++|+++++++.+  +++.+.+++.+++++|+|||++|+ +.++.++++++++ |+++.+|....... ..+.     
T Consensus       230 ~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~-~~~~-----  303 (373)
T 2fzw_A          230 RAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE-IATR-----  303 (373)
T ss_dssp             HHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCC-EEEC-----
T ss_pred             HHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCce-eeeC-----
Confidence            999999999999875  567777777766689999999996 7889999999999 99999998654211 0111     


Q ss_pred             hHHHHHHhcCeEEEEec
Q 018013          345 GLCEKILAKSQTVVCIH  361 (362)
Q Consensus       345 ~~~~~~~~k~~~i~G~~  361 (362)
                        ...++.|+ +++|++
T Consensus       304 --~~~~~~~~-~i~g~~  317 (373)
T 2fzw_A          304 --PFQLVTGR-TWKGTA  317 (373)
T ss_dssp             --THHHHTTC-EEEECS
T ss_pred             --HHHHhcCC-EEEEec
Confidence              12356677 888863

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.7e-42  Score=328.27  Aligned_cols=254  Identities=22%  Similarity=0.382  Sum_probs=219.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++.++..    +++++.+.| +++++||+|||.++|||++|++++.|.++..    ...+|.++|||++|+|+++
T Consensus         1 MkA~~~~~~g~~----l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~----~~~~p~i~G~e~~G~V~~v   71 (345)
T 3jv7_A            1 MKAVQYTEIGSE----PVVVDIPTP-TPGPGEILLKVTAAGLCHSDIFVMDMPAAQY----AYGLPLTLGHEGVGTVAEL   71 (345)
T ss_dssp             CEEEEECSTTSC----CEEEECCCC-CCCTTCEEEEEEEEECCHHHHHHHHSCTTTC----CSCSSEECCSEEEEEEEEE
T ss_pred             CeEEEEcCCCCc----eEEEEecCC-CCCCCeEEEEEEEEeeCHHHHHHHcCCCCcc----CCCCCcccCcccEEEEEEE
Confidence            899999987743    789999999 8999999999999999999999999876421    2567899999999999999


Q ss_pred             CCCCCCCCCCCeEEEe---------------------------------cCCCeeeEEEee-CCCeeeCCC-CCHHHHHh
Q 018013          167 GDSVNNVKVGTPAAIM---------------------------------TFGSYAEFTMVP-SKHILPVAR-PDPEVVAM  211 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~---------------------------------~~g~~~~~~~v~-~~~~~~ip~-~~~~~a~l  211 (362)
                      |++|++|++||||++.                                 .+|+|+||+++| ++.++++|+ ++.++|++
T Consensus        72 G~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~~~~~~aa~l  151 (345)
T 3jv7_A           72 GEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPL  151 (345)
T ss_dssp             CTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTTCCHHHHGGG
T ss_pred             CCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCCCCHHHhhhh
Confidence            9999999999999984                                 269999999999 999999998 45667779


Q ss_pred             hhhHHHHHHHHHHh--CCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHH
Q 018013          212 LTSGLTASIALEQA--GPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT  288 (362)
Q Consensus       212 ~~~~~tA~~al~~~--~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~  288 (362)
                      +.+++|||+++.+.  ..++|++|+|+|+ |++|++++|+|+.+ |++|++++++++|.+.++++|+++++++++ ++.+
T Consensus       152 ~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~  229 (345)
T 3jv7_A          152 TDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAAD  229 (345)
T ss_dssp             GTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHH
T ss_pred             hhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHH
Confidence            99999999999984  3499999999995 99999999999998 679999999999999999999999999876 6666


Q ss_pred             HHHHH-CCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          289 VFKEE-FPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       289 ~~~~~-~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+++. .++++|+||||+|+. .++.++++|+++|+++.+|.........++          .++.|++++.|++
T Consensus       230 ~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~----------~~~~~~~~i~g~~  294 (345)
T 3jv7_A          230 AIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF----------FMIPFGASVVTPY  294 (345)
T ss_dssp             HHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST----------TTSCTTCEEECCC
T ss_pred             HHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH----------HHHhCCCEEEEEe
Confidence            55554 456899999999986 899999999999999999987653222111          3678889988875

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.9e-42  Score=328.52  Aligned_cols=266  Identities=21%  Similarity=0.304  Sum_probs=215.0

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      ++||+++++.++..  +.+++++.+.| +++++||+|||.++|||++|++++.|.++.     ...+|+++|||++|+|+
T Consensus         2 m~mka~~~~~~g~~--~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~v~G~e~~G~V~   73 (349)
T 4a27_A            2 MEMRAVVLAGFGGL--NKLRLFRKAMP-EPQDGELKIRVKACGLNFIDLMVRQGNIDN-----PPKTPLVPGFECSGIVE   73 (349)
T ss_dssp             CCEEEEEECSSSSG--GGEEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSS-----CCCSSBCCCSEEEEEEE
T ss_pred             ceeEEEEEccCCCc--ceeEEEecCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCcCC-----CCCCCccccceeEEEEE
Confidence            57999999987643  34889999999 899999999999999999999999998642     35678999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCc
Q 018013          165 AVGDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAG  240 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g  240 (362)
                      ++|++|++|++||||+++. +|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+... ++|++|||+|++|
T Consensus        74 ~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G  153 (349)
T 4a27_A           74 ALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG  153 (349)
T ss_dssp             EECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTS
T ss_pred             EeCCCCCCCCCCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            9999999999999999876 699999999999999999985  56677788899999999988777 9999999999889


Q ss_pred             hHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhcc
Q 018013          241 GTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV  319 (362)
Q Consensus       241 ~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~  319 (362)
                      ++|++++|+|+.+| ++|++++ ++++.+.++ +|++++++ .+.++.+.+++.+++++|+||||+|++.++.++++|++
T Consensus       154 ~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~  230 (349)
T 4a27_A          154 GVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKP  230 (349)
T ss_dssp             HHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-------CTTEEE
T ss_pred             HHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCchhHHHHHHHhhc
Confidence            99999999999986 5899988 467888888 99999999 77888888888888899999999999888999999999


Q ss_pred             CCEEEEEcCcccccCCCC-CCC------CChhhHHHHHHhcCeEEEEec
Q 018013          320 YGRLIVIGMISQYQGEHG-WQP------SNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       320 ~G~~v~~G~~~~~~~~~~-~~~------~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +|+++.+|..+....... +..      ...+.....++.|++++.|++
T Consensus       231 ~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~  279 (349)
T 4a27_A          231 LGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFS  279 (349)
T ss_dssp             EEEEEEEC-------------------------CHHHHHHHTCEEEEEC
T ss_pred             CCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEe
Confidence            999999998754332110 000      001122346888999999974

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-42  Score=327.11  Aligned_cols=260  Identities=23%  Similarity=0.348  Sum_probs=223.8

Q ss_pred             CCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           83 LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      +|.+||+++++.++.+    +++++.+.| +++++||+|||.++|||++|++++.|.++.     ...+|.++|||++|+
T Consensus         2 ~p~~mka~~~~~~g~~----l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~v~G~E~~G~   71 (347)
T 2hcy_A            2 IPETQKGVIFYESHGK----LEYKDIPVP-KPKANELLINVKYSGVCHTDLHAWHGDWPL-----PVKLPLVGGHEGAGV   71 (347)
T ss_dssp             CCSEEEEEEESSTTCC----CEEEEEECC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSS-----CCCSSEECCCEEEEE
T ss_pred             CCcccEEEEEeCCCCC----CEEEEeeCC-CCCCCEEEEEEEEEEechhHHHHhcCCCCC-----CCCCCcccCccceEE
Confidence            5788999999887632    788899999 789999999999999999999999986542     245789999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHh
Q 018013          163 IAAVGDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAM  211 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l  211 (362)
                      |+++|++|++|++||||++.                             .+|+|+||+++|++.++++|++  +.+++++
T Consensus        72 V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  151 (347)
T 2hcy_A           72 VVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPI  151 (347)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGG
T ss_pred             EEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHH
Confidence            99999999999999999863                             1589999999999999999985  4567788


Q ss_pred             hhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCC-CccHHHHH
Q 018013          212 LTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVF  290 (362)
Q Consensus       212 ~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~-~~~~~~~~  290 (362)
                      +.++.|||+++.+...++|++|||+|++|++|++++|+++..|++|+++++++++.+.++++|+++++|+. .+++.+.+
T Consensus       152 ~~~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~  231 (347)
T 2hcy_A          152 LCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAV  231 (347)
T ss_dssp             GTHHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHH
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHH
Confidence            88999999999887559999999999989999999999999999999999999999999999999999987 56777776


Q ss_pred             HHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          291 KEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++...+++|++||++|. +.++.++++|+++|+++.+|........       +  ....++.|++++.|++
T Consensus       232 ~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~-------~--~~~~~~~~~~~i~g~~  294 (347)
T 2hcy_A          232 LKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCC-------S--DVFNQVVKSISIVGSY  294 (347)
T ss_dssp             HHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEE-------E--EHHHHHHTTCEEEECC
T ss_pred             HHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-------C--CHHHHhhCCcEEEEcc
Confidence            66543489999999996 7899999999999999999987632111       1  1235788999999975

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=5.4e-42  Score=324.65  Aligned_cols=258  Identities=28%  Similarity=0.379  Sum_probs=222.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++..  +.+++++.+.| +++++||+|||.++|||++|++++.|.++.     ...+|.++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~--~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~v~G~E~~G~V~~v   72 (343)
T 2eih_A            1 MRAVVMRARGGP--EVLEVADLPVP-EPGPKEVRVRLKAAALNHLDVWVRKGVASP-----KLPLPHVLGADGSGVVDAV   72 (343)
T ss_dssp             CEEEEECSSSSG--GGEEEEECCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSST-----TCCSSEECCSEEEEEEEEE
T ss_pred             CeEEEEecCCCC--ceEEEEecCCC-CCCCCEEEEEEEEEEeCHHHHHHhcCCCCC-----CCCCCcccccceEEEEEEE
Confidence            789999877642  34888999999 789999999999999999999999987542     2357889999999999999


Q ss_pred             CCCCCCCCCCCeEEE---------------------------e-cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAI---------------------------M-TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~---------------------------~-~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~  216 (362)
                      |++|++|++||||++                           + ..|+|+||+++|++.++++|++  +.++++++.+++
T Consensus        73 G~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  152 (343)
T 2eih_A           73 GPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFL  152 (343)
T ss_dssp             CSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred             CCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHH
Confidence            999999999999993                           2 2599999999999999999985  456666999999


Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-  294 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-  294 (362)
                      |||+++.+... ++|++|||+|++|++|++++|+++..|++|+++++++++.+.++++|+++++|+.+.++.+.+.+.. 
T Consensus       153 ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~  232 (343)
T 2eih_A          153 TAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTG  232 (343)
T ss_dssp             HHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhC
Confidence            99999988655 9999999999999999999999999999999999999999999999999999998878777676655 


Q ss_pred             CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          295 PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       295 ~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++|++||++|++.++.++++|+++|+++.+|..+.....  +.   +    ..++.|++++.|++
T Consensus       233 ~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~---~----~~~~~~~~~~~g~~  290 (343)
T 2eih_A          233 GKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGT--LP---F----AHVFYRQLSILGST  290 (343)
T ss_dssp             TTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCC--CC---T----THHHHTTCEEEECC
T ss_pred             CCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCc--cC---H----HHHHhCCcEEEEec
Confidence            45899999999988899999999999999999987654221  11   1    14778999999974

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-41  Score=323.29  Aligned_cols=257  Identities=23%  Similarity=0.293  Sum_probs=214.6

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhc-CCccCCCCCCCCCCCCCCCCceEEE
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSS-GRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~-g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      +++||+++++.++     .+++++.+.| +++++||+|||.++|||++|++++. |.+..    ....+|.++|||++|+
T Consensus         2 ~~~mka~~~~~~~-----~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~----~~~~~p~v~G~E~~G~   71 (352)
T 1e3j_A            2 ASDNLSAVLYKQN-----DLRLEQRPIP-EPKEDEVLLQMAYVGICGSDVHYYEHGRIAD----FIVKDPMVIGHEASGT   71 (352)
T ss_dssp             --CCEEEEEEETT-----EEEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSBSSS----CBCCSCEECCCEEEEE
T ss_pred             cccCEEEEEEcCC-----cEEEEEecCC-CCCCCeEEEEEEEEEEChhhHHHHcCCCCcc----ccCCCCccccccceEE
Confidence            3569999998754     3888999999 8999999999999999999999887 43321    1235789999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhh
Q 018013          163 IAAVGDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAML  212 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~  212 (362)
                      |+++|++|++|++||||++.                             ..|+|+||+++|++.++++|++ +.+.|++.
T Consensus        72 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  151 (352)
T 1e3j_A           72 VVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL  151 (352)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH
T ss_pred             EEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh
Confidence            99999999999999999874                             2599999999999999999986 55556666


Q ss_pred             hhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHH
Q 018013          213 TSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFK  291 (362)
Q Consensus       213 ~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~  291 (362)
                      .++.|||+++.....++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.++++|+++++++++ .++.+.+.
T Consensus       152 ~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~  230 (352)
T 1e3j_A          152 EPLSVGVHACRRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSII  230 (352)
T ss_dssp             HHHHHHHHHHHHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHH
T ss_pred             chHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHH
Confidence            78999999996665599999999995 99999999999999999999999999999999999999999885 55555554


Q ss_pred             HHC----CCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          292 EEF----PKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       292 ~~~----~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +.+    ++++|++||++|+. .++.++++|+++|+++.+|..... .       .++  ...++.|++++.|++
T Consensus       231 ~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~-------~~~--~~~~~~~~~~i~g~~  295 (352)
T 1e3j_A          231 ERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQM-V-------TVP--LVNACAREIDIKSVF  295 (352)
T ss_dssp             HHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSC-C-------CCC--HHHHHTTTCEEEECC
T ss_pred             HHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-c-------ccc--HHHHHhcCcEEEEec
Confidence            433    57899999999974 789999999999999999974321 1       111  235889999999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=5.7e-42  Score=328.43  Aligned_cols=256  Identities=18%  Similarity=0.206  Sum_probs=218.0

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      +.|.+||+++++.++..    +++++.+.| +++++||+|||.++|||++|++++.|. +      ...+|.++|||++|
T Consensus         4 ~~p~~mka~~~~~~g~~----l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~-~------~~~~P~v~GhE~~G   71 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSP----LCIEEIEVS-PPKACEVRIQVIATCVCPTDINATDPK-K------KALFPVVLGHECAG   71 (376)
T ss_dssp             TSCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHTTCTT-S------CCCSSBCCCCEEEE
T ss_pred             CCChheeEEEEecCCCC----eEEEEeeCC-CCCCCeEEEEEeEEeEchhhHHHhcCC-C------CCCCCcccCccccE
Confidence            45778999999876533    788899998 789999999999999999999998885 2      23578999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEec-----------------------------------------------------CCCee
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMT-----------------------------------------------------FGSYA  188 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~-----------------------------------------------------~g~~~  188 (362)
                      +|+++|++|++|++||||++..                                                     .|+|+
T Consensus        72 ~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~a  151 (376)
T 1e3i_A           72 IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFS  151 (376)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSB
T ss_pred             EEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccce
Confidence            9999999999999999998742                                                     28999


Q ss_pred             eEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCH
Q 018013          189 EFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGE  264 (362)
Q Consensus       189 ~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~  264 (362)
                      ||+++|++.++++|++  +.++|+++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|+++++++
T Consensus       152 ey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~  230 (376)
T 1e3i_A          152 QYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDING  230 (376)
T ss_dssp             SEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             eEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence            9999999999999985  46667777899999999977666 9999999999 59999999999999999 899999999


Q ss_pred             hHHHHHHHcCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCC
Q 018013          265 HKAQLLKELGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       265 ~~~~~l~~~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~  340 (362)
                      +|.+.++++|+++++|+.+  +++.+.+++.+++++|+||||+|+ +.++.++++++++ |+++.+|......       
T Consensus       231 ~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~-------  303 (376)
T 1e3i_A          231 EKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM-------  303 (376)
T ss_dssp             GGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEE-------
T ss_pred             HHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCcc-------
Confidence            9999999999999999875  567777766655589999999996 7889999999999 9999999832111       


Q ss_pred             CChhhHHHHHHhcCeEEEEec
Q 018013          341 SNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       341 ~~~~~~~~~~~~k~~~i~G~~  361 (362)
                       .+  ....++.|+ ++.|++
T Consensus       304 -~~--~~~~~~~~~-~i~g~~  320 (376)
T 1e3i_A          304 -TI--PTVDVILGR-SINGTF  320 (376)
T ss_dssp             -EE--EHHHHHTTC-EEEECS
T ss_pred             -cc--CHHHhhccC-eEEEEe
Confidence             11  122466777 888863

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.1e-42  Score=324.50  Aligned_cols=252  Identities=27%  Similarity=0.408  Sum_probs=215.0

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCC--ccCCCCCCCCCCCCCCCCceEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGR--YFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~--~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      ++||+++++.++.+  +.+++++.+.| +++++||+|||.++|||++|++++.|.  ++..   ....+|.++|||++|+
T Consensus         5 ~~Mka~~~~~~g~~--~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~---~~~~~p~v~G~E~~G~   78 (321)
T 3tqh_A            5 KEMKAIQFDQFGPP--KVLKLVDTPTP-EYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKK---LKNNLPSGLGYDFSGE   78 (321)
T ss_dssp             CEEEEEEESSSCSG--GGEEEEEEECC-CCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHH---HTTSCSBCCCCEEEEE
T ss_pred             ccceEEEEccCCCc--ceeEEEecCCC-CCCCCEEEEEEEEEEcCHHHHHHhcCCcccccc---ccCCCCCcccceeEEE
Confidence            46999999987643  45889999999 899999999999999999999999883  2100   1346789999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEec-----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEE
Q 018013          163 IAAVGDSVNNVKVGTPAAIMT-----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLV  235 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~~-----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI  235 (362)
                      |+++|++|++|++||||++..     .|+|+||+++|++.++++|++  +.++++++.+++|||+++.....++|++|||
T Consensus        79 V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV  158 (321)
T 3tqh_A           79 VIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLI  158 (321)
T ss_dssp             EEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred             EEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEE
Confidence            999999999999999999875     599999999999999999985  5677888889999999995544499999999


Q ss_pred             EcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCcc-HHHHHHHHCCCceeEEEECCChHHHHHHH
Q 018013          236 TAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGGDMFNLCL  314 (362)
Q Consensus       236 ~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~-~~~~~~~~~~~g~Dvvid~~g~~~~~~~~  314 (362)
                      +||+|++|++++|+|+.+|++|+++++ +++.++++++|+++++|+++.+ +.+.+     +++|++|||+|++.+..++
T Consensus       159 ~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~~~~~~~lGa~~~i~~~~~~~~~~~~-----~g~D~v~d~~g~~~~~~~~  232 (321)
T 3tqh_A          159 HAGAGGVGHLAIQLAKQKGTTVITTAS-KRNHAFLKALGAEQCINYHEEDFLLAIS-----TPVDAVIDLVGGDVGIQSI  232 (321)
T ss_dssp             SSTTSHHHHHHHHHHHHTTCEEEEEEC-HHHHHHHHHHTCSEEEETTTSCHHHHCC-----SCEEEEEESSCHHHHHHHG
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEec-cchHHHHHHcCCCEEEeCCCcchhhhhc-----cCCCEEEECCCcHHHHHHH
Confidence            999999999999999999999999985 5678899999999999999877 54432     5799999999998889999


Q ss_pred             HHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          315 KALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       315 ~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++++++|+++.+|.....            .....+..+++++.|+
T Consensus       233 ~~l~~~G~iv~~g~~~~~------------~~~~~~~~~~~~~~~~  266 (321)
T 3tqh_A          233 DCLKETGCIVSVPTITAG------------RVIEVAKQKHRRAFGL  266 (321)
T ss_dssp             GGEEEEEEEEECCSTTHH------------HHHHHHHHTTCEEECC
T ss_pred             HhccCCCEEEEeCCCCch------------hhhhhhhhcceEEEEE
Confidence            999999999999864431            1223467788888874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=9.8e-43  Score=330.35  Aligned_cols=248  Identities=22%  Similarity=0.331  Sum_probs=213.2

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEE
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      +++||+++++.++.    .+++++.+.| +++++||+|||.++|||++|++.+.|.++      ...+|.++|||++|+|
T Consensus         2 ~m~mka~~~~~~~~----~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~p~i~G~E~~G~V   70 (348)
T 3two_A            2 RVQSKGFAIFSKDE----HFKPHDFSRH-AVGPRDVLIDILYAGICHSDIHSAYSEWK------EGIYPMIPGHEIAGII   70 (348)
T ss_dssp             CEEEEEEEBCSTTS----CCEEEEEEEC-CCCTTEEEEEEEEEEECHHHHHHHTTSSS------CCCSSBCCCCCEEEEE
T ss_pred             ceEEEEEEEccCCC----CCeEEEeeCC-CCCCCeEEEEEEEeeecccchhhhcCCCC------CCCCCeecCcceeEEE
Confidence            35799999987654    3889999999 89999999999999999999999998764      2467999999999999


Q ss_pred             EEeCCCCCCCCCCCeEEEecC--------------------------------------CCeeeEEEeeCCCeeeCCCC-
Q 018013          164 AAVGDSVNNVKVGTPAAIMTF--------------------------------------GSYAEFTMVPSKHILPVARP-  204 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~~~--------------------------------------g~~~~~~~v~~~~~~~ip~~-  204 (362)
                      +++|++|++|++||||++...                                      |+|+||+++|++.++++|++ 
T Consensus        71 ~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~  150 (348)
T 3two_A           71 KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNA  150 (348)
T ss_dssp             EEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTS
T ss_pred             EEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCC
Confidence            999999999999999986321                                      99999999999999999985 


Q ss_pred             -CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC
Q 018013          205 -DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA  283 (362)
Q Consensus       205 -~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~  283 (362)
                       +.++|+++.++.|||+++.+...++|++|||+|+ |++|++++|+|+.+|++|+++++++++.++++++|+++++ .+.
T Consensus       151 ~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~  228 (348)
T 3two_A          151 PLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDP  228 (348)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSG
T ss_pred             CHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCH
Confidence             5677789999999999998875599999999995 9999999999999999999999999999999999999988 322


Q ss_pred             ccHHHHHHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc-cccCCCCCCCCChhhHHHHHH-hcCeEEEEe
Q 018013          284 EDIKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS-QYQGEHGWQPSNYPGLCEKIL-AKSQTVVCI  360 (362)
Q Consensus       284 ~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~~~~~~-~k~~~i~G~  360 (362)
                      +.+        ..++|+|||++|+. .++.++++|+++|+++.+|... ....       .++  ...++ .|++++.|+
T Consensus       229 ~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~-------~~~--~~~~~~~~~~~i~g~  291 (348)
T 3two_A          229 KQC--------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAP-------VLS--VFDFIHLGNRKVYGS  291 (348)
T ss_dssp             GGC--------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCC-------EEE--HHHHHHTCSCEEEEC
T ss_pred             HHH--------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcc-------cCC--HHHHHhhCCeEEEEE
Confidence            211        22899999999986 8999999999999999999876 3211       011  12455 999999997


Q ss_pred             c
Q 018013          361 H  361 (362)
Q Consensus       361 ~  361 (362)
                      +
T Consensus       292 ~  292 (348)
T 3two_A          292 L  292 (348)
T ss_dssp             C
T ss_pred             e
Confidence            5

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=9.8e-43  Score=327.10  Aligned_cols=252  Identities=18%  Similarity=0.247  Sum_probs=216.5

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.+  +.+++++.+.| +++++||+|||.++|||++|++.+.|.++.     ...+|.++|||++|+|+++
T Consensus         1 MkA~~~~~~g~~--~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~v~G~E~~G~V~~~   72 (324)
T 3nx4_A            1 MQALILEQQDGK--TLASVQHLEES-QLPAGDVTVDVHWSSLNYKDALAITGKGKI-----IRHFPMIPGIDFAGTVHAS   72 (324)
T ss_dssp             CEEEEEEESSSS--EEEEEEECCGG-GSCCCSEEEEEEEEEECHHHHHHHHTCTTC-----CCSSSBCCCSEEEEEEEEE
T ss_pred             CceEEEecCCCC--ceeeEeecCCC-CCCCCEEEEEEEEEeCCHHHHhhhcCCCCC-----CCCCCccccceeEEEEEEe
Confidence            899999987753  35889999999 899999999999999999999999997642     3567899999999999999


Q ss_pred             CCCCCCCCCCCeEEEe-------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHh--C-CCC--CCE
Q 018013          167 GDSVNNVKVGTPAAIM-------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQA--G-PAS--GKK  232 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~-------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~--~-~~~--g~~  232 (362)
                      |  +++|++||||++.       .+|+|+||+++|++.++++|++  +.++|+++..++|||++|+..  . .++  |+ 
T Consensus        73 G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~-  149 (324)
T 3nx4_A           73 E--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGE-  149 (324)
T ss_dssp             S--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC-
T ss_pred             C--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCe-
Confidence            9  5899999999986       4799999999999999999985  677888899999999988643  2 355  45 


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHH
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNL  312 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~  312 (362)
                      |||+|++|++|++++|+|+.+|++|++++++++|.++++++|+++++|+++.+.   ++...++++|++|||+|++.++.
T Consensus       150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~~~~d~v~d~~g~~~~~~  226 (324)
T 3nx4_A          150 VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE---SRPLEKQLWAGAIDTVGDKVLAK  226 (324)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC---CCSSCCCCEEEEEESSCHHHHHH
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH---HHhhcCCCccEEEECCCcHHHHH
Confidence            999999999999999999999999999999999999999999999999876543   34455678999999999999999


Q ss_pred             HHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          313 CLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       313 ~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++++++|+++.+|..+......         ....++.|++++.|++
T Consensus       227 ~~~~l~~~G~iv~~G~~~~~~~~~---------~~~~~~~~~~~~~g~~  266 (324)
T 3nx4_A          227 VLAQMNYGGCVAACGLAGGFALPT---------TVMPFILRNVRLQGVD  266 (324)
T ss_dssp             HHHTEEEEEEEEECCCTTCSEEEE---------ESHHHHHHCCEEEECC
T ss_pred             HHHHHhcCCEEEEEecCCCCCCCC---------CHHHHhhcCeEEEEEe
Confidence            999999999999999876532211         1124788999999974

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.1e-42  Score=328.21  Aligned_cols=255  Identities=24%  Similarity=0.374  Sum_probs=214.6

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCC-CCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLP-IKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~-~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      |.+||+++++.++.    .+++++.|.| + ++++||+|||.++|||++|++++.|.++...   ...+|.++|||++|+
T Consensus        13 ~~~mka~~~~~~g~----~l~~~~~p~P-~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~---~~~~p~v~G~E~~G~   84 (359)
T 1h2b_A           13 VERLKAARLHEYNK----PLRIEDVDYP-RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELL---QPKLPYTLGHENVGY   84 (359)
T ss_dssp             ----CEEEESSTTS----CCEEECCCCC-CCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHH---CCCSSEECCCCEEEE
T ss_pred             hhhceEEEEecCCC----CcEEEEccCC-CCCCCCEEEEEEEEEEecccchHHHhCCCcccc---CCCCCeecCcCceEE
Confidence            56799999988763    2788999998 6 8999999999999999999999998653100   135788999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHH---
Q 018013          163 IAAVGDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVV---  209 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a---  209 (362)
                      |+++|++|++|++||||++.                            ..|+|+||+++|++.++++|++  +.++|   
T Consensus        85 V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~  164 (359)
T 1h2b_A           85 IEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMA  164 (359)
T ss_dssp             EEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTG
T ss_pred             EEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhcc
Confidence            99999999999999999875                            2599999999999999999985  45555   


Q ss_pred             HhhhhHHHHHHHHHHh-CC-CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccH
Q 018013          210 AMLTSGLTASIALEQA-GP-ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDI  286 (362)
Q Consensus       210 ~l~~~~~tA~~al~~~-~~-~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~  286 (362)
                      +++.+++|||+++.+. .. ++|++|||+|+ |++|++++|+|+.+ |++|++++++++|.++++++|+++++|++++ +
T Consensus       165 ~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~  242 (359)
T 1h2b_A          165 PLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-P  242 (359)
T ss_dssp             GGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-H
T ss_pred             chhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-H
Confidence            5778899999999984 44 99999999997 99999999999999 9999999999999999999999999999877 7


Q ss_pred             HHHHHHHCC-CceeEEEECCChH---HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          287 KTVFKEEFP-KGFDIIYESVGGD---MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       287 ~~~~~~~~~-~g~Dvvid~~g~~---~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+.+++.++ +++|++||++|+.   .++.++++  ++|+++.+|.....  .  +   +    ...++.|++++.|++
T Consensus       243 ~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~--~--~---~----~~~~~~~~~~i~g~~  308 (359)
T 1h2b_A          243 VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL--R--F---P----TIRVISSEVSFEGSL  308 (359)
T ss_dssp             HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC--C--C---C----HHHHHHTTCEEEECC
T ss_pred             HHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC--C--C---C----HHHHHhCCcEEEEec
Confidence            777766654 4899999999986   78888887  99999999986542  1  1   1    225788999999975

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-41  Score=319.81  Aligned_cols=256  Identities=27%  Similarity=0.329  Sum_probs=219.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.+  +.+++++.+.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||++|+|+++
T Consensus         2 Mka~~~~~~g~~--~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~p~v~G~E~~G~V~~v   72 (327)
T 1qor_A            2 ATRIEFHKHGGP--EVLQAVEFTPA-DPAENEIQVENKAIGINFIDTYIRSGLYP------PPSLPSGLGTEAAGIVSKV   72 (327)
T ss_dssp             CEEEEBSSCCSG--GGCEEEECCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSC------CSSSSBCCCSCEEEEEEEE
T ss_pred             cEEEEEcCCCCh--hheEEeccCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCC------CCCCCCCCCceeEEEEEEE
Confidence            899998876532  35888999999 78999999999999999999999998753      2357889999999999999


Q ss_pred             CCCCCCCCCCCeEEEe--cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCch
Q 018013          167 GDSVNNVKVGTPAAIM--TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGG  241 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~--~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~  241 (362)
                      |++|++|++||||...  .+|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+... ++|++|||+||+|+
T Consensus        73 G~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~gg  152 (327)
T 1qor_A           73 GSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGG  152 (327)
T ss_dssp             CTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBH
T ss_pred             CCCCCCCCCCCEEEECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCH
Confidence            9999999999999543  3599999999999999999985  46667899999999999986666 99999999999999


Q ss_pred             HHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccC
Q 018013          242 TGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVY  320 (362)
Q Consensus       242 vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~  320 (362)
                      +|++++|+++..|++|+++++++++.+.++++|+++++|+.+.++.+.+.+.. ++++|++|||+|++.++.++++++++
T Consensus       153 iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~  232 (327)
T 1qor_A          153 VGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRR  232 (327)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999998888777666554 46899999999999999999999999


Q ss_pred             CEEEEEcCcccccCCCCCCCCChhhHHHHHHhc-CeEEEEe
Q 018013          321 GRLIVIGMISQYQGEHGWQPSNYPGLCEKILAK-SQTVVCI  360 (362)
Q Consensus       321 G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k-~~~i~G~  360 (362)
                      |+++.+|..+.....  +.   .    ..++.| ++++.|+
T Consensus       233 G~iv~~g~~~~~~~~--~~---~----~~~~~~~~~~~~~~  264 (327)
T 1qor_A          233 GLMVSFGNSSGAVTG--VN---L----GILNQKGSLYVTRP  264 (327)
T ss_dssp             EEEEECCCTTCCCCC--BC---T----HHHHHTTSCEEECC
T ss_pred             CEEEEEecCCCCCCc--cC---H----HHHhhccceEEEcc
Confidence            999999987653221  11   1    135666 7777753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=6.3e-42  Score=322.86  Aligned_cols=260  Identities=26%  Similarity=0.379  Sum_probs=219.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++..  +.+++++.+.| +++++||+|||.++|||++|++++.|.+...   ....+|.++|||++|+|+++
T Consensus         2 Mka~~~~~~g~~--~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~---~~~~~p~i~G~e~~G~V~~v   75 (333)
T 1wly_A            2 VMAAVIHKKGGP--DNFVWEEVKVG-SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPL---VVGEPPIVVGFEAAAVVEEV   75 (333)
T ss_dssp             CEEEEESSCSSG--GGEEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHC-------------CCEECCCEEEEEEEEE
T ss_pred             cEEEEEcccCCc--ceeEEEeccCC-CCCCCeEEEEEEEEecCHHHHHHhCCCcCCC---CCCCCCccccceeEEEEEEE
Confidence            899999876632  35888999999 7899999999999999999999998865100   01347889999999999999


Q ss_pred             CCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCC--CHH--HHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCC
Q 018013          167 GDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARP--DPE--VVAMLTSGLTASIALEQAGP-ASGKKVLVTAAA  239 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~--~~~--~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~  239 (362)
                      |++|++|++||||+...  .|+|+||+++|++.++++|++  +.+  +|+++.+++|||+++.+... ++|++|+|+|++
T Consensus        76 G~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~  155 (333)
T 1wly_A           76 GPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAA  155 (333)
T ss_dssp             CTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTT
T ss_pred             CCCCCCCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCc
Confidence            99999999999998875  799999999999999999985  566  78999999999999987666 999999999999


Q ss_pred             chHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhc
Q 018013          240 GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALA  318 (362)
Q Consensus       240 g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~  318 (362)
                      |++|++++|+++..|++|+++++++++.+.++++|+++++|+.+.++.+.+.+. .++++|++|||+|++.++.++++++
T Consensus       156 ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~  235 (333)
T 1wly_A          156 GGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLR  235 (333)
T ss_dssp             STTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEE
T ss_pred             cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999887777666554 4568999999999999999999999


Q ss_pred             cCCEEEEEcCcccccCCCCCCCCChhhHHH-HHHhcC--eEEEEec
Q 018013          319 VYGRLIVIGMISQYQGEHGWQPSNYPGLCE-KILAKS--QTVVCIH  361 (362)
Q Consensus       319 ~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~-~~~~k~--~~i~G~~  361 (362)
                      ++|+++.+|..++....  +   +    .. .++.|+  +++.|++
T Consensus       236 ~~G~iv~~g~~~~~~~~--~---~----~~~~~~~~~~~~~i~g~~  272 (333)
T 1wly_A          236 PRGMCAAYGHASGVADP--I---R----VVEDLGVRGSLFITRPAL  272 (333)
T ss_dssp             EEEEEEECCCTTCCCCC--C---C----HHHHTTTTTSCEEECCCG
T ss_pred             cCCEEEEEecCCCCcCC--C---C----hhHhhhhcCCcEEEEEee
Confidence            99999999987642211  1   1    12 466788  8888864

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.1e-41  Score=326.33  Aligned_cols=258  Identities=20%  Similarity=0.253  Sum_probs=219.6

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      ..|.+||+++++.++..    +++++.+.| +++++||+|||.++|||++|++++.|.++       ..+|.++|||++|
T Consensus         4 ~~~~~mkA~~~~~~g~~----l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~P~v~GhE~~G   71 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKP----FSIEEVEVA-PPKAHEVRIKMVATGICRSDDHVVSGTLV-------TPLPVIAGHEAAG   71 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTSSC-------CCSSBCCCCSEEE
T ss_pred             CCceeEEEEEEecCCCc----eEEEEccCC-CCCCCeEEEEEeEEeechhhHHHHcCCCC-------CCCCcccCcCceE
Confidence            34678999999876633    788899998 78999999999999999999999988653       1278999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEE
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTM  192 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~  192 (362)
                      +|+++|++|++|++||||++..                                                 .|+|+||++
T Consensus        72 ~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~  151 (374)
T 2jhf_A           72 IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTV  151 (374)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEE
T ss_pred             EEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEE
Confidence            9999999999999999998752                                                 389999999


Q ss_pred             eeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHH
Q 018013          193 VPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQ  268 (362)
Q Consensus       193 v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~  268 (362)
                      +|++.++++|++  +.++|+++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+
T Consensus       152 v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~  230 (374)
T 2jhf_A          152 VDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFA  230 (374)
T ss_dssp             EEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             EchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            999999999985  46667778899999999977666 9999999999 69999999999999999 8999999999999


Q ss_pred             HHHHcCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCChh
Q 018013          269 LLKELGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSNYP  344 (362)
Q Consensus       269 ~l~~~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~  344 (362)
                      .++++|+++++|+.+  +++.+.+++.+++++|+|||++|+ +.++.++++++++ |+++.+|....... ..+.     
T Consensus       231 ~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~-~~~~-----  304 (374)
T 2jhf_A          231 KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN-LSMN-----  304 (374)
T ss_dssp             HHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCC-EEEC-----
T ss_pred             HHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCc-cccC-----
Confidence            999999999999875  567777777666689999999996 7889999999999 99999998654211 0111     


Q ss_pred             hHHHHHHhcCeEEEEec
Q 018013          345 GLCEKILAKSQTVVCIH  361 (362)
Q Consensus       345 ~~~~~~~~k~~~i~G~~  361 (362)
                        ...++.|+ ++.|++
T Consensus       305 --~~~~~~~~-~i~g~~  318 (374)
T 2jhf_A          305 --PMLLLSGR-TWKGAI  318 (374)
T ss_dssp             --THHHHTTC-EEEECS
T ss_pred             --HHHHhcCC-eEEEec
Confidence              12366677 888864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.1e-42  Score=340.75  Aligned_cols=269  Identities=23%  Similarity=0.306  Sum_probs=221.9

Q ss_pred             cCCCccceEEEEeccCC---------CccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCC------------
Q 018013           81 VQLPESFEKLVVHTLNH---------NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGR------------  139 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~---------~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~------------  139 (362)
                      .++|.+||+++++.++.         .+.+.+++++.|.| +++++||+|||.++|||++|++...+.            
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P-~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMP-ELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEEeccCC-CCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            46899999999999872         22236899999999 899999999999999999998643211            


Q ss_pred             -ccCCCCCCCCCCC-CCCCCceEEEEEEeCCCCCCCCCCCeEEEec----------------------------CCCeee
Q 018013          140 -YFSDGNDIGSRLP-FDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----------------------------FGSYAE  189 (362)
Q Consensus       140 -~~~~~~~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~g~~~~  189 (362)
                       ...+.  ....+| .++|||++|+|+++|++|++|++||||++.+                            +|+|+|
T Consensus        98 ~~g~~~--~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~ae  175 (447)
T 4a0s_A           98 RQGGWA--TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAE  175 (447)
T ss_dssp             TTCGGG--GGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBS
T ss_pred             ccCccc--cccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceee
Confidence             10000  123466 5899999999999999999999999999854                            599999


Q ss_pred             EEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHh--CC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          190 FTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQA--GP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       190 ~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~--~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      |+++|++.++++|++  +.++|+++.+++|||++|...  .. ++|++|||+|++|++|++++|+|+..|++|+++++++
T Consensus       176 y~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~  255 (447)
T 4a0s_A          176 YGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA  255 (447)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             eeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            999999999999985  566677888999999999643  44 9999999999989999999999999999999999999


Q ss_pred             hHHHHHHHcCCcEEEeCCCcc------------------HHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEE
Q 018013          265 HKAQLLKELGVDRVINYKAED------------------IKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       265 ~~~~~l~~~g~~~v~~~~~~~------------------~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~  326 (362)
                      ++.+.++++|+++++++.+.+                  +.+.+.+.+++++|++|||+|++.++.++++++++|+++.+
T Consensus       256 ~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~  335 (447)
T 4a0s_A          256 QKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTC  335 (447)
T ss_dssp             HHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEES
T ss_pred             HHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEE
Confidence            999999999999999875433                  14445554577899999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          327 GMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       327 G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      |.........         ....++.|++++.|++
T Consensus       336 G~~~~~~~~~---------~~~~~~~~~~~i~g~~  361 (447)
T 4a0s_A          336 GSSSGYLHTF---------DNRYLWMKLKKIVGSH  361 (447)
T ss_dssp             CCTTCSEEEE---------EHHHHHHTTCEEEECC
T ss_pred             ecCCCccccc---------CHHHHHhCCCEEEecC
Confidence            9876533211         1235788999999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.5e-41  Score=321.11  Aligned_cols=253  Identities=26%  Similarity=0.359  Sum_probs=219.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++..    +++++.|.| +++++||+|||.++|||++|++.+.|.++.     ...+|.++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~----l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~v~GhE~~G~V~~v   70 (339)
T 1rjw_A            1 MKAAVVEQFKEP----LKIKEVEKP-TISYGEVLVRIKACGVCHTDLHAAHGDWPV-----KPKLPLIPGHEGVGIVEEV   70 (339)
T ss_dssp             CEEEEBSSTTSC----CEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSS-----CCCSSBCCCSCEEEEEEEE
T ss_pred             CeEEEEcCCCCC----cEEEEeeCC-CCCCCEEEEEEEEEeEchhhHHHhcCCCCc-----CCCCCeeccccceEEEEEE
Confidence            789998876632    788999999 789999999999999999999999886542     2457899999999999999


Q ss_pred             CCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |++|++|++||||++.                             ..|+|+||+++|++.++++|++  +.++|+++.++
T Consensus        71 G~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~  150 (339)
T 1rjw_A           71 GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAG  150 (339)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHH
T ss_pred             CCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhH
Confidence            9999999999999863                             2589999999999999999985  55677888999


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .|||+++.+...++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.++++|+++++|+.+.++.+.+.+.+ 
T Consensus       151 ~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~-  228 (339)
T 1rjw_A          151 VTTYKALKVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV-  228 (339)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH-
T ss_pred             HHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh-
Confidence            99999999885599999999997 8899999999999999999999999999999999999999998878777666555 


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++|++||++|+ ..++.++++++++|+++.+|..+....        +  ....++.|++++.|++
T Consensus       229 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--------~--~~~~~~~~~~~i~g~~  285 (339)
T 1rjw_A          229 GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMP--------I--PIFDTVLNGIKIIGSI  285 (339)
T ss_dssp             SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEE--------E--EHHHHHHTTCEEEECC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCc--------c--CHHHHHhCCcEEEEec
Confidence            589999999996 789999999999999999998764211        1  1235778999999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.3e-41  Score=323.65  Aligned_cols=257  Identities=23%  Similarity=0.261  Sum_probs=215.2

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      ++||+++++.++     .+++++.+.| +++++||+|||.++|||++|++++.|.....   ....+|.++|||++|+|+
T Consensus         6 ~~mka~~~~~~~-----~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~p~v~G~E~~G~V~   76 (356)
T 1pl8_A            6 PNNLSLVVHGPG-----DLRLENYPIP-EPGPNEVLLRMHSVGICGSDVHYWEYGRIGN---FIVKKPMVLGHEASGTVE   76 (356)
T ss_dssp             CCCEEEEEEETT-----EEEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSEETT---EECSSCEECCCEEEEEEE
T ss_pred             cCceEEEEecCC-----cEEEEEccCC-CCCCCeEEEEEEEeeeCHHHHHHHcCCCCCC---ccCCCCcccccceEEEEE
Confidence            469999998754     3888999999 8999999999999999999999887432110   013568899999999999


Q ss_pred             EeCCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhh
Q 018013          165 AVGDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTS  214 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~  214 (362)
                      ++|++|++|++||||++.                             ..|+|+||+++|++.++++|++ +.+.|++..+
T Consensus        77 ~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~  156 (356)
T 1pl8_A           77 KVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEP  156 (356)
T ss_dssp             EECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHH
T ss_pred             EECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhch
Confidence            999999999999999974                             2599999999999999999986 4555566678


Q ss_pred             HHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC---CccHHHHH
Q 018013          215 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK---AEDIKTVF  290 (362)
Q Consensus       215 ~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~---~~~~~~~~  290 (362)
                      +.|||+++.....++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.++++++|++++++++   +.++.+.+
T Consensus       157 ~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i  235 (356)
T 1pl8_A          157 LSVGIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKV  235 (356)
T ss_dssp             HHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHH
Confidence            99999999766669999999999 59999999999999999 999999999999999999999999988   35555555


Q ss_pred             HHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          291 KEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+.+++++|+|||++|+ ..++.++++|+++|+++.+|..... .  .+   +    ...++.|++++.|++
T Consensus       236 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~---~----~~~~~~~~~~i~g~~  297 (356)
T 1pl8_A          236 EGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEM-T--TV---P----LLHAAIREVDIKGVF  297 (356)
T ss_dssp             HHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSC-C--CC---C----HHHHHHTTCEEEECC
T ss_pred             HHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCC-C--cc---C----HHHHHhcceEEEEec
Confidence            55545789999999997 4789999999999999999974321 1  11   1    235789999999975

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-41  Score=326.25  Aligned_cols=257  Identities=19%  Similarity=0.201  Sum_probs=218.8

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhh-hhcCCccCCCCCCCCCCCCCCCCceE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVN-FSSGRYFSDGNDIGSRLPFDAGFEAV  160 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~-~~~g~~~~~~~~~~~~~p~~~G~e~~  160 (362)
                      ..|.+||+++++.++..    +++++.|.| +++++||+|||.++|||++|++ ++.|.++       ..+|.++|||++
T Consensus         4 ~~~~~mka~~~~~~~~~----l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-------~~~P~v~GhE~~   71 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANKP----LVIEEIEVD-VPHANEIRIKIIATGVCHTDLYHLFEGKHK-------DGFPVVLGHEGA   71 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTTCCT-------TSCSEECCCCEE
T ss_pred             CCcceeEEEEEecCCCC----eEEEEeeCC-CCCCCEEEEEEeEEeechhhHHHHhCCCCC-------CCCCcccCccce
Confidence            45678999999876533    788899999 8899999999999999999999 8888653       357889999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEE
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFT  191 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~  191 (362)
                      |+|+++|++|++|++||||++..                                                 .|+|+||+
T Consensus        72 G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~  151 (374)
T 1cdo_A           72 GIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYT  151 (374)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEE
T ss_pred             EEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEE
Confidence            99999999999999999998752                                                 38999999


Q ss_pred             EeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHH
Q 018013          192 MVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKA  267 (362)
Q Consensus       192 ~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~  267 (362)
                      ++|++.++++|++  +.++|+++.++.|||+++.+... ++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.
T Consensus       152 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~  230 (374)
T 1cdo_A          152 VVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKF  230 (374)
T ss_dssp             EEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             EEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            9999999999985  46667778899999999977666 9999999999 59999999999999999 899999999999


Q ss_pred             HHHHHcCCcEEEeCCC--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCCh
Q 018013          268 QLLKELGVDRVINYKA--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSNY  343 (362)
Q Consensus       268 ~~l~~~g~~~v~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~  343 (362)
                      +.++++|+++++|+.+  +++.+.+++.+++++|++||++|+ +.++.++++++++ |+++.+|.......  .+.    
T Consensus       231 ~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~--~~~----  304 (374)
T 1cdo_A          231 EKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV--ATR----  304 (374)
T ss_dssp             HHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCE--EEC----
T ss_pred             HHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCc--ccC----
Confidence            9999999999999874  567777766655589999999996 7889999999999 99999998764111  011    


Q ss_pred             hhHHHHHHhcCeEEEEec
Q 018013          344 PGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       344 ~~~~~~~~~k~~~i~G~~  361 (362)
                         ...++.|+ ++.|++
T Consensus       305 ---~~~~~~~~-~i~g~~  318 (374)
T 1cdo_A          305 ---PIQLIAGR-TWKGSM  318 (374)
T ss_dssp             ---HHHHHTTC-EEEECS
T ss_pred             ---HHHHhcCC-eEEEEe
Confidence               12466677 888863

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=4.1e-41  Score=318.83  Aligned_cols=255  Identities=23%  Similarity=0.227  Sum_probs=215.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++.++.     +++++.|.|+.++||||+|||.++|||++|++.+.|..       ...+|+++|||++|+|+++
T Consensus         1 MkAvv~~~~g~-----l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~-------~~~~P~i~G~E~~G~V~~v   68 (346)
T 4a2c_A            1 MKSVVNDTDGI-----VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG-------AHYYPITLGHEFSGYIDAV   68 (346)
T ss_dssp             CEEEEECSSSC-----EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC-------SSSSSBCCCCEEEEEEEEE
T ss_pred             CCEEEEecCCC-----EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC-------CCCCCccccEEEEEEEEEE
Confidence            89999998763     89999999944679999999999999999999988865       3467999999999999999


Q ss_pred             CCCCCCCCCCCeEEEec----------------------------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHH
Q 018013          167 GDSVNNVKVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLT  217 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~----------------------------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~t  217 (362)
                      |++|++|++||+|++..                            +|+|+||+++|++.++++|++ +.+.|++..++.+
T Consensus        69 G~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~  148 (346)
T 4a2c_A           69 GSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITV  148 (346)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHH
T ss_pred             CCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhchHHHH
Confidence            99999999999998742                            489999999999999999996 4444455556666


Q ss_pred             HHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-C
Q 018013          218 ASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-P  295 (362)
Q Consensus       218 A~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~  295 (362)
                      +++++.....++|++|+|+| +|++|++++|+|+++|++ +++++++++|.++++++|+++++|+++.+..+..+..+ +
T Consensus       149 ~~~~~~~~~~~~g~~VlV~G-aG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~  227 (346)
T 4a2c_A          149 GLHAFHLAQGCENKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLREL  227 (346)
T ss_dssp             HHHHHHHTTCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGG
T ss_pred             HHHHHHHhccCCCCEEEEEC-CCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhccc
Confidence            66666666559999999998 599999999999999994 57788899999999999999999999988887776654 5


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++|++||++|. ..++.++++++++|+++.+|........       .+.....++.|+++|+|++
T Consensus       228 ~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-------~~~~~~~~~~k~~~i~G~~  287 (346)
T 4a2c_A          228 RFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHL-------TSATFGKILRKELTVIGSW  287 (346)
T ss_dssp             CSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEE-------CHHHHHHHHHHTCEEEECC
T ss_pred             CCcccccccccccchhhhhhheecCCeEEEEEeccCCCccc-------cccCHHHHhhceeEEEEEe
Confidence            789999999995 6889999999999999999987653321       1123346889999999974

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.4e-41  Score=324.26  Aligned_cols=261  Identities=23%  Similarity=0.222  Sum_probs=214.2

Q ss_pred             cCCCccceEEEEeccCCCccCceEEEeccCCC-------CCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCC
Q 018013           81 VQLPESFEKLVVHTLNHNFRDATIKVRAPLRL-------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPF  153 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~  153 (362)
                      .++|.+||+++++.++     .+++++.|.|.       +++++||+|||.++|||++|++++.+.....   ...++|.
T Consensus         3 ~~~~~~mka~~~~~~~-----~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~---~~~~~p~   74 (363)
T 3m6i_A            3 SSASKTNIGVFTNPQH-----DLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGP---MIVECDH   74 (363)
T ss_dssp             --CCSCCEEEEECTTC-----CEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSS---CBCCSCE
T ss_pred             CCCcccceeEEEeCCC-----cEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCC---ccCCCCc
Confidence            3577889999998654     38899998872       4789999999999999999999887432111   1346789


Q ss_pred             CCCCceEEEEEEeCCCCCCCCCCCeEEEe-----------------------------cCCCeeeEEEeeCCCeeeCCCC
Q 018013          154 DAGFEAVGLIAAVGDSVNNVKVGTPAAIM-----------------------------TFGSYAEFTMVPSKHILPVARP  204 (362)
Q Consensus       154 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~ip~~  204 (362)
                      ++|||++|+|+++|++|++|++||||++.                             .+|+|+||+++|++.++++|+-
T Consensus        75 v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~  154 (363)
T 3m6i_A           75 VLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGNM  154 (363)
T ss_dssp             ECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTTC
T ss_pred             ccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCCC
Confidence            99999999999999999999999999974                             4699999999999999999983


Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCC-
Q 018013          205 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYK-  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~-  282 (362)
                      +.+.|++..++.|||+++.....++|++|||+|+ |++|++++|+|+.+|++ |++++++++|.++++++ +++++++. 
T Consensus       155 s~~~aa~~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~  232 (363)
T 3m6i_A          155 SYENGAMLEPLSVALAGLQRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKV  232 (363)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEEC
T ss_pred             CHHHHHhhhHHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccc
Confidence            3444555578999999997666699999999996 99999999999999996 99999999999999999 65555443 


Q ss_pred             ----CccHHHHHHHHC-CCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeE
Q 018013          283 ----AEDIKTVFKEEF-PKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQT  356 (362)
Q Consensus       283 ----~~~~~~~~~~~~-~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  356 (362)
                          .+++.+.+++.+ ++++|+||||+|++ .++.++++|+++|+++.+|.......   +   +    ...++.|+++
T Consensus       233 ~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~---~---~----~~~~~~~~~~  302 (363)
T 3m6i_A          233 ERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQ---I---P----FMRASVREVD  302 (363)
T ss_dssp             CSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCC---C---C----HHHHHHHTCE
T ss_pred             cccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCcc---c---c----HHHHHhcCcE
Confidence                245666666655 57999999999986 78999999999999999998654221   1   1    2358899999


Q ss_pred             EEEec
Q 018013          357 VVCIH  361 (362)
Q Consensus       357 i~G~~  361 (362)
                      +.|++
T Consensus       303 i~g~~  307 (363)
T 3m6i_A          303 LQFQY  307 (363)
T ss_dssp             EEECC
T ss_pred             EEEcc
Confidence            99875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.2e-41  Score=322.92  Aligned_cols=256  Identities=23%  Similarity=0.346  Sum_probs=219.4

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcC-CccCCCCCCCCCCCCCCCCceEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSG-RYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g-~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      ++||+++++.++.    .+++++.|.| +++++||+|||.++|||++|++++.| .++..    ...+|.++|||++|+|
T Consensus         3 ~~mka~~~~~~g~----~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~----~~~~p~v~G~E~~G~V   73 (348)
T 2d8a_A            3 EKMVAIMKTKPGY----GAELVEVDVP-KPGPGEVLIKVLATSICGTDLHIYEWNEWAQS----RIKPPQIMGHEVAGEV   73 (348)
T ss_dssp             CEEEEEEECSSSS----SCEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHHTCTTHHH----HCCSSEECCCEEEEEE
T ss_pred             CcceEEEEECCCC----CEEEEECCCC-CCCcCEEEEEEeEEEecHHHHHHHcCCCCCcc----cCCCCCccCccceEEE
Confidence            4699999988763    4788999999 78999999999999999999999988 43200    1357889999999999


Q ss_pred             EEeCCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhh
Q 018013          164 AAVGDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTS  214 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~  214 (362)
                      +++|++|++|++||||++.                            ..|+|+||+++|++.++++|++ +.+.|++..+
T Consensus        74 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~  153 (348)
T 2d8a_A           74 VEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEP  153 (348)
T ss_dssp             EEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHH
T ss_pred             EEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhhH
Confidence            9999999999999999985                            2599999999999999999986 4455555568


Q ss_pred             HHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHH
Q 018013          215 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       215 ~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~  293 (362)
                      +.|||+++..... +|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++++++++++++.+.+.+.
T Consensus       154 ~~ta~~~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~  231 (348)
T 2d8a_A          154 LGNAVDTVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDI  231 (348)
T ss_dssp             HHHHHHHHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHH
T ss_pred             HHHHHHHHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHH
Confidence            9999999976666 9999999997 9999999999999999 99999999999999999999999999888888777766


Q ss_pred             C-CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHH-HHHHhcCeEEEEec
Q 018013          294 F-PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLC-EKILAKSQTVVCIH  361 (362)
Q Consensus       294 ~-~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~i~G~~  361 (362)
                      + +.++|+|||++|+ +.++.++++++++|+++.+|..... ..  +   +    . ..++.|++++.|++
T Consensus       232 ~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~--~---~----~~~~~~~~~~~i~g~~  292 (348)
T 2d8a_A          232 TDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK-VT--I---D----FNNLIIFKALTIYGIT  292 (348)
T ss_dssp             TTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-CC--C---C----HHHHTTTTTCEEEECC
T ss_pred             cCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-cc--c---C----chHHHHhCCcEEEEec
Confidence            5 4589999999997 7889999999999999999986542 11  1   1    1 34778999999974

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3.2e-42  Score=338.15  Aligned_cols=271  Identities=24%  Similarity=0.324  Sum_probs=222.9

Q ss_pred             cCCCccceEEEEeccCC-----------CccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCC------
Q 018013           81 VQLPESFEKLVVHTLNH-----------NFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSD------  143 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~-----------~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~------  143 (362)
                      .++|.+|||++++.++.           .+...+++++.|.| +++++||+|||.++|||++|++...+.....      
T Consensus        25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P-~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~  103 (456)
T 3krt_A           25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVP-ELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER  103 (456)
T ss_dssp             SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred             CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCC-CCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence            37899999999998631           22346899999999 8999999999999999999997654321100      


Q ss_pred             ----C-CCCCCCCC-CCCCCceEEEEEEeCCCCCCCCCCCeEEEec----------------------------CCCeee
Q 018013          144 ----G-NDIGSRLP-FDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----------------------------FGSYAE  189 (362)
Q Consensus       144 ----~-~~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~g~~~~  189 (362)
                          . ......+| .++|||++|+|+++|++|++|++||+|++..                            +|+|+|
T Consensus       104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~ae  183 (456)
T 3krt_A          104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAE  183 (456)
T ss_dssp             HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBS
T ss_pred             ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccc
Confidence                0 00013567 5899999999999999999999999999842                            499999


Q ss_pred             EEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHh--CC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          190 FTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQA--GP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       190 ~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~--~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      |+++|++.++++|++  +.++|+++.++.|||+++...  .. ++|++|||+|++|++|++++|+|+..|++|+++++++
T Consensus       184 y~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~  263 (456)
T 3krt_A          184 IALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP  263 (456)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             eEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH
Confidence            999999999999985  456666778999999999764  44 9999999999889999999999999999999999999


Q ss_pred             hHHHHHHHcCCcEEEeCCCccH-----------------HHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEE
Q 018013          265 HKAQLLKELGVDRVINYKAEDI-----------------KTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       265 ~~~~~l~~~g~~~v~~~~~~~~-----------------~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~  326 (362)
                      +|.++++++|+++++++.+.++                 .+.+++. .+.++|+||||+|++.+..++++++++|+++.+
T Consensus       264 ~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~  343 (456)
T 3krt_A          264 QKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTC  343 (456)
T ss_dssp             HHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEES
T ss_pred             HHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEE
Confidence            9999999999999999887543                 2444444 457999999999999999999999999999999


Q ss_pred             cCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          327 GMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       327 G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      |..+......         ....++.|+++|.|++
T Consensus       344 G~~~~~~~~~---------~~~~~~~~~~~i~g~~  369 (456)
T 3krt_A          344 ASTSGYMHEY---------DNRYLWMSLKRIIGSH  369 (456)
T ss_dssp             CCTTCSEEEE---------EHHHHHHTTCEEEECC
T ss_pred             ecCCCccccc---------CHHHHHhcCeEEEEec
Confidence            9876543221         1235788899999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.4e-42  Score=326.35  Aligned_cols=255  Identities=19%  Similarity=0.200  Sum_probs=216.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhh-hhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVN-FSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~-~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      |||++++.++.     +++++.|.| +++++||+|||.++|||++|++ +..|.++       ..+|.++|||++|+|++
T Consensus         1 MkA~~~~~~~~-----~~~~e~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-------~~~p~v~G~E~~G~V~~   67 (352)
T 3fpc_A            1 MKGFAMLSIGK-----VGWIEKEKP-APGPFDAIVRPLAVAPCTSDIHTVFEGAIG-------ERHNMILGHEAVGEVVE   67 (352)
T ss_dssp             CEEEEEEETTE-----EEEEECCCC-CCCTTCEEEEEEEEECCHHHHHHHHSCTTC-------CCSSEECCCEEEEEEEE
T ss_pred             CeEEEEccCCC-----ceEEeCCCC-CCCCCeEEEEeCEEeEcccchHHHhCCCCC-------CCCCcccCCcceEEEEE
Confidence            89999998764     788899999 7999999999999999999999 5677653       45689999999999999


Q ss_pred             eCCCCCCCCCCCeEEEe-------------------------------cCCCeeeEEEeeCC--CeeeCCCC--CHHHHH
Q 018013          166 VGDSVNNVKVGTPAAIM-------------------------------TFGSYAEFTMVPSK--HILPVARP--DPEVVA  210 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~-------------------------------~~g~~~~~~~v~~~--~~~~ip~~--~~~~a~  210 (362)
                      +|++|++|++||||++.                               .+|+|+||+++|+.  .++++|++  +.+++.
T Consensus        68 vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~  147 (352)
T 3fpc_A           68 VGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVM  147 (352)
T ss_dssp             ECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTT
T ss_pred             ECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhh
Confidence            99999999999999963                               35999999999986  89999985  455666


Q ss_pred             hhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHH
Q 018013          211 MLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV  289 (362)
Q Consensus       211 l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~  289 (362)
                      ++.++.|||++++....++|++|||+| +|++|++++|+|+++|+ +|++++++++|.+.++++|+++++++++.++.+.
T Consensus       148 ~~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~  226 (352)
T 3fpc_A          148 IPDMMTTGFHGAELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQ  226 (352)
T ss_dssp             TTTHHHHHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHH
T ss_pred             ccchhHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHH
Confidence            778999999999665559999999998 69999999999999999 8999999999999999999999999998888887


Q ss_pred             HHHHC-CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          290 FKEEF-PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       290 ~~~~~-~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++.+ ++++|+|||++|+ +.++.++++|+++|+++.+|....... .++....     ..+..+++++.|++
T Consensus       227 v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~-~~~~~~~-----~~~~~~~~~i~g~~  294 (352)
T 3fpc_A          227 ILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDN-IDIPRSE-----WGVGMGHKHIHGGL  294 (352)
T ss_dssp             HHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSE-EEEETTT-----TGGGTBCEEEEEBC
T ss_pred             HHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCc-eecchhH-----hhhhccccEEEEee
Confidence            77765 4589999999998 789999999999999999998764222 1111111     11345788888764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.1e-42  Score=329.53  Aligned_cols=254  Identities=24%  Similarity=0.372  Sum_probs=217.0

Q ss_pred             CCCccceEEEEeccCCCccCceEEEe--ccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVR--APLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~--~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      ++|.+||+++++.++..    +++++  .|.| +++++||+|||.++|||++|++.+.|.++      ...+|.++|||+
T Consensus         2 ~~p~~mka~~~~~~~~~----l~~~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~p~v~GhE~   70 (360)
T 1piw_A            2 SYPEKFEGIAIQSHEDW----KNPKKTKYDPK-PFYDHDIDIKIEACGVCGSDIHCAAGHWG------NMKMPLVVGHEI   70 (360)
T ss_dssp             CTTTCEEEEEECCSSST----TSCEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHHTTTTS------CCCSSEECCCCE
T ss_pred             CCChheEEEEEecCCCC----eeEEeccccCC-CCCCCeEEEEEEEeccchhhHHHhcCCCC------CCCCCcccCcCc
Confidence            46788999999886633    66777  8888 78999999999999999999999988653      235789999999


Q ss_pred             EEEEEEeCCCCC-CCCCCCeEEEe------------------------------------cCCCeeeEEEeeCCCeeeCC
Q 018013          160 VGLIAAVGDSVN-NVKVGTPAAIM------------------------------------TFGSYAEFTMVPSKHILPVA  202 (362)
Q Consensus       160 ~G~V~~vG~~v~-~~~~Gd~V~~~------------------------------------~~g~~~~~~~v~~~~~~~ip  202 (362)
                      +|+|+++|++|+ +|++||||++.                                    ..|+|+||+++|++.++++|
T Consensus        71 ~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP  150 (360)
T 1piw_A           71 VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIP  150 (360)
T ss_dssp             EEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECC
T ss_pred             eEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECC
Confidence            999999999999 99999999531                                    25899999999999999999


Q ss_pred             CC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEe
Q 018013          203 RP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN  280 (362)
Q Consensus       203 ~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~  280 (362)
                      ++  +.++|+++.++.|||+++.+...++|++|||+|+ |++|++++|+|+.+|++|+++++++++.++++++|++++++
T Consensus       151 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~  229 (360)
T 1piw_A          151 ENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIA  229 (360)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEc
Confidence            85  4567788999999999998855599999999997 99999999999999999999999999999999999999999


Q ss_pred             CCCc-cHHHHHHHHCCCceeEEEECCCh---HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeE
Q 018013          281 YKAE-DIKTVFKEEFPKGFDIIYESVGG---DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQT  356 (362)
Q Consensus       281 ~~~~-~~~~~~~~~~~~g~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  356 (362)
                      +.+. ++.+.+.    +++|+|||++|+   ..++.++++|+++|+++.+|.... ...  +..       ..++.|+++
T Consensus       230 ~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~--~~~-------~~~~~~~~~  295 (360)
T 1piw_A          230 TLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEM--LSL-------KPYGLKAVS  295 (360)
T ss_dssp             GGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCC--EEE-------CGGGCBSCE
T ss_pred             CcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccc--cCH-------HHHHhCCeE
Confidence            8876 6654432    589999999997   688899999999999999998764 211  111       136789999


Q ss_pred             EEEec
Q 018013          357 VVCIH  361 (362)
Q Consensus       357 i~G~~  361 (362)
                      +.|++
T Consensus       296 i~g~~  300 (360)
T 1piw_A          296 ISYSA  300 (360)
T ss_dssp             EEECC
T ss_pred             EEEEe
Confidence            99875

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.4e-41  Score=318.26  Aligned_cols=253  Identities=22%  Similarity=0.304  Sum_probs=219.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+.   ..+++++.|.| +|+||||+|||.++|||++|++++.|.++       .++|.++|||++|+|+++
T Consensus         1 MKA~v~~~~~~---~~~~l~e~~~P-~~~p~eVLVkv~a~gic~~D~~~~~G~~~-------~~~p~i~GhE~aG~V~~v   69 (348)
T 4eez_A            1 MKAAVVRHNPD---GYADLVEKELR-AIKPNEALLDMEYCGVCHTDLHVAAGDFG-------NKAGTVLGHEGIGIVKEI   69 (348)
T ss_dssp             CEEEEECSSCC---SSEEEEECCCC-CCCTTEEEEEEEEEECCHHHHHHHTTTTC-------CCTTCBCCSEEEEEEEEE
T ss_pred             CeEEEEEcCCC---CcEEEEEeECC-CCCCCEEEEEEEEEEECHHHHHHhcCCCC-------CCCCcccceeEEEEEEEE
Confidence            89999865332   34889999999 89999999999999999999999999763       467899999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |++|++|++||||++..                             .|+|+||+++|++.++++|++  +.++++++.++
T Consensus        70 G~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~  149 (348)
T 4eez_A           70 GADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAG  149 (348)
T ss_dssp             CTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHH
T ss_pred             CceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccce
Confidence            99999999999998642                             389999999999999999985  57788899999


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      +|||++++....++|++|||+| +|++|.+++|+|+.+ |++|++++++++|.+.++++|+++++|+++.++.+.+++.+
T Consensus       150 ~ta~~~l~~~~~~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t  228 (348)
T 4eez_A          150 VTTYKAIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKIT  228 (348)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHT
T ss_pred             eeEEeeecccCCCCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhc
Confidence            9999999888779999999998 599999999999866 67999999999999999999999999999988887777665


Q ss_pred             -CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          295 -PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       295 -~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                       +.++|++++++++ ..+..++++++++|+++.+|........      +    ...++.|+++|.|++
T Consensus       229 ~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~------~----~~~~~~~~~~i~gs~  287 (348)
T 4eez_A          229 GGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTL------S----VPTVVFDGVEVAGSL  287 (348)
T ss_dssp             TSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEE------C----HHHHHHSCCEEEECC
T ss_pred             CCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCcc------C----HHHHHhCCeEEEEEe
Confidence             5689999999885 6789999999999999999976553321      1    235889999999975

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3.8e-42  Score=321.96  Aligned_cols=223  Identities=20%  Similarity=0.281  Sum_probs=192.1

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      ++||+++++. +   .+.+++++.+.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||++|+|+
T Consensus         3 ~tMka~~~~~-~---~~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~p~i~G~e~~G~V~   71 (315)
T 3goh_A            3 EQHQVWAYQT-K---THSVTLNSVDIP-ALAADDILVQNQAIGINPVDWKFIKANPI------NWSNGHVPGVDGAGVIV   71 (315)
T ss_dssp             CEEEEEEEET-T---TTEEEEEEEECC-CCCTTEEEEEEEEEEECHHHHHHHHHCTT------CCCTTCCCCSEEEEEEE
T ss_pred             cceEEEEEeC-C---CCeeEEEecCCC-CCCCCEEEEEEEEEecCHHHHHHHcCCCC------cCCCCCEeeeeeEEEEE
Confidence            3699999995 1   234899999999 89999999999999999999999998764      24678999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEc
Q 018013          165 AVGDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTA  237 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~g  237 (362)
                      ++|++|++|++||||++..    +|+|+||+++|++.++++|++  +.++|+++.+++|||+++ +... ++|++|||+|
T Consensus        72 ~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G  150 (315)
T 3goh_A           72 KVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVG  150 (315)
T ss_dssp             EECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEEC
T ss_pred             EeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEEC
Confidence            9999999999999999986    799999999999999999985  456667999999999999 5555 9999999999


Q ss_pred             CCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHh
Q 018013          238 AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKAL  317 (362)
Q Consensus       238 a~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l  317 (362)
                      + |++|++++|+|+.+|++|++++ +++|.++++++|++++++    + .+   +. ++++|++|||+|++.+..++++|
T Consensus       151 a-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~----d-~~---~v-~~g~Dvv~d~~g~~~~~~~~~~l  219 (315)
T 3goh_A          151 F-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYR----E-PS---QV-TQKYFAIFDAVNSQNAAALVPSL  219 (315)
T ss_dssp             C-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEES----S-GG---GC-CSCEEEEECC-------TTGGGE
T ss_pred             C-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEc----C-HH---Hh-CCCccEEEECCCchhHHHHHHHh
Confidence            8 9999999999999999999999 899999999999999984    2 11   12 77899999999998888999999


Q ss_pred             ccCCEEEEEcCcc
Q 018013          318 AVYGRLIVIGMIS  330 (362)
Q Consensus       318 ~~~G~~v~~G~~~  330 (362)
                      +++|+++.+|...
T Consensus       220 ~~~G~~v~~g~~~  232 (315)
T 3goh_A          220 KANGHIICIQDRI  232 (315)
T ss_dssp             EEEEEEEEECCC-
T ss_pred             cCCCEEEEEeCCC
Confidence            9999999998654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.1e-41  Score=324.85  Aligned_cols=255  Identities=25%  Similarity=0.344  Sum_probs=219.4

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      -+||+++++.++    +.+++++.+.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||++|+|+
T Consensus        16 ~~mka~~~~~~g----~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~------~~~~P~v~GhE~~G~V~   84 (380)
T 1vj0_A           16 LKAHAMVLEKFN----QPLVYKEFEIS-DIPRGSILVEILSAGVCGSDVHMFRGEDP------RVPLPIILGHEGAGRVV   84 (380)
T ss_dssp             EEEEEEEBCSTT----SCCEEEEEEEC-CCCTTCEEEEEEEEEECHHHHHHHTTCCT------TCCSSBCCCCEEEEEEE
T ss_pred             hheEEEEEecCC----CCeEEEEccCC-CCCCCEEEEEEeEEeecccchHHhcCCCC------CCCCCcccCcCcEEEEE
Confidence            469999998876    24888999999 78999999999999999999999998653      23578899999999999


Q ss_pred             EeCCCCC------CCCCCCeEEEe-------------------------------------cCCCeeeEEEe-eCCCeee
Q 018013          165 AVGDSVN------NVKVGTPAAIM-------------------------------------TFGSYAEFTMV-PSKHILP  200 (362)
Q Consensus       165 ~vG~~v~------~~~~Gd~V~~~-------------------------------------~~g~~~~~~~v-~~~~~~~  200 (362)
                      ++| +|+      +|++||||++.                                     ..|+|+||+++ |++.+++
T Consensus        85 ~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~  163 (380)
T 1vj0_A           85 EVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK  163 (380)
T ss_dssp             EES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEE
T ss_pred             EeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEE
Confidence            999 999      99999999973                                     15999999999 9999999


Q ss_pred             CCCC-CHH-HHHhhhhHHHHHHHHHHhC-CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcCCc
Q 018013          201 VARP-DPE-VVAMLTSGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVD  276 (362)
Q Consensus       201 ip~~-~~~-~a~l~~~~~tA~~al~~~~-~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g~~  276 (362)
                      +|++ +.+ .|++..+++|||+++.... .++|++|||+| +|++|++++|+|+.+| ++|+++++++++.+.++++|++
T Consensus       164 iP~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~  242 (380)
T 1vj0_A          164 VSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD  242 (380)
T ss_dssp             ECTTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS
T ss_pred             CCCCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc
Confidence            9986 444 6777779999999998777 68999999999 8999999999999999 5999999999999999999999


Q ss_pred             EEEeCC---CccHHHHHHHHCC-CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcc-cccCCCCCCCCChhhHHHH-
Q 018013          277 RVINYK---AEDIKTVFKEEFP-KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMIS-QYQGEHGWQPSNYPGLCEK-  349 (362)
Q Consensus       277 ~v~~~~---~~~~~~~~~~~~~-~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~~~~-  349 (362)
                      ++++++   ++++.+.+++.++ .++|+||||+|+ +.++.++++|+++|+++.+|..+ .....       ++  ... 
T Consensus       243 ~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~-------~~--~~~~  313 (380)
T 1vj0_A          243 LTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVP-------FK--VYEW  313 (380)
T ss_dssp             EEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEE-------EC--HHHH
T ss_pred             EEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCee-------Ec--hHHH
Confidence            999988   6677776766654 589999999996 68999999999999999999876 31111       11  224 


Q ss_pred             HHhcCeEEEEec
Q 018013          350 ILAKSQTVVCIH  361 (362)
Q Consensus       350 ~~~k~~~i~G~~  361 (362)
                      ++.|++++.|++
T Consensus       314 ~~~~~~~i~g~~  325 (380)
T 1vj0_A          314 LVLKNATFKGIW  325 (380)
T ss_dssp             TTTTTCEEEECC
T ss_pred             HHhCCeEEEEee
Confidence            778999999975

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.2e-40  Score=322.20  Aligned_cols=248  Identities=19%  Similarity=0.243  Sum_probs=212.0

Q ss_pred             ceEEEeccCCCC-CCCCeEEEEEeEEeeChhhhhhhcCCccCCC-CCCCCCCCCCCCCceEEEEEEeCCCC------CCC
Q 018013          102 ATIKVRAPLRLP-IKPNHVLVKIIFAGVNASDVNFSSGRYFSDG-NDIGSRLPFDAGFEAVGLIAAVGDSV------NNV  173 (362)
Q Consensus       102 ~~~~~~~~~p~~-~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~-~~~~~~~p~~~G~e~~G~V~~vG~~v------~~~  173 (362)
                      .+++++.+.| + ++++||+|||.++|||++|++++.|...... -.....+|.++|||++|+|+++|++|      ++|
T Consensus        41 ~l~~~~~~~P-~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~  119 (404)
T 3ip1_A           41 EVRVEEVPEP-RIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRF  119 (404)
T ss_dssp             EEEEEEECCC-CCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEEC
T ss_pred             ceEEEEcCCC-CCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCC
Confidence            3889999999 6 9999999999999999999999886432110 00124678999999999999999999      899


Q ss_pred             CCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC--------CHHHHHhhhhHHH
Q 018013          174 KVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP--------DPEVVAMLTSGLT  217 (362)
Q Consensus       174 ~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~--------~~~~a~l~~~~~t  217 (362)
                      ++||||++.                            ..|+|+||+++|++.++++|+.        +.++|+++.+++|
T Consensus       120 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~t  199 (404)
T 3ip1_A          120 EIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSV  199 (404)
T ss_dssp             CTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHH
T ss_pred             CCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccccchhHHhhhhHHHH
Confidence            999999984                            3699999999999999999973        2458889999999


Q ss_pred             HHHHHHHhC-C-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          218 ASIALEQAG-P-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       218 A~~al~~~~-~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ||+++.... . ++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|.++++++|+++++++++.++.+.+++.+
T Consensus       200 a~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t  278 (404)
T 3ip1_A          200 AYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYT  278 (404)
T ss_dssp             HHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT
T ss_pred             HHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHh
Confidence            999997543 4 99999999996 9999999999999999 999999999999999999999999999888888777765


Q ss_pred             C-CceeEEEECCChH--HHHHHHHHh----ccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          295 P-KGFDIIYESVGGD--MFNLCLKAL----AVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       295 ~-~g~Dvvid~~g~~--~~~~~~~~l----~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      + +++|+||||+|+.  .+..++++|    +++|+++.+|.......   +       ....++.|++++.|++
T Consensus       279 ~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~---~-------~~~~~~~~~~~i~g~~  342 (404)
T 3ip1_A          279 NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIP---L-------TGEVFQVRRAQIVGSQ  342 (404)
T ss_dssp             TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEE---E-------CHHHHHHTTCEEEECC
T ss_pred             CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCc---c-------cHHHHhccceEEEEec
Confidence            4 5899999999986  777788888    99999999998765321   1       1345889999999976

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.1e-40  Score=314.83  Aligned_cols=261  Identities=26%  Similarity=0.384  Sum_probs=220.6

Q ss_pred             ccceEEEEecc--CCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCc----
Q 018013           85 ESFEKLVVHTL--NHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFE----  158 (362)
Q Consensus        85 ~~~~a~~~~~~--~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e----  158 (362)
                      .+||+|+++..  +.+..+.+++++.|.| +++++||+|||.++|||++|++.+.+...       ...|.++|||    
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-------~~~p~~~G~e~g~~   77 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLG-EPAEGQILVKNEYLSLDPAMRGWMNDARS-------YIPPVGIGEVMRAL   77 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECC-CCCTTCEEEEEEEEECCTHHHHHHSCSCC-------SSCCCCTTSBCCCE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCC-CCCCCEEEEEEEEEEeCHHHHhhhhcccc-------cCCCCCCCcccCCc
Confidence            56999999863  2222456999999999 89999999999999999999988876432       2346667777    


Q ss_pred             eEEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCC--CHHH--HHhhhhHHHHHHHHHHhCC-CCCCEE
Q 018013          159 AVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARP--DPEV--VAMLTSGLTASIALEQAGP-ASGKKV  233 (362)
Q Consensus       159 ~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~--~~~~--a~l~~~~~tA~~al~~~~~-~~g~~V  233 (362)
                      ++|+|++.  +|++|++||||++.  |+|+||+++|++.++++|++  +.++  ++++.+++|||++|.+... ++|++|
T Consensus        78 ~~G~V~~~--~v~~~~vGdrV~~~--G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~v  153 (336)
T 4b7c_A           78 GVGKVLVS--KHPGFQAGDYVNGA--LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETV  153 (336)
T ss_dssp             EEEEEEEE--CSTTCCTTCEEEEE--CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEE
T ss_pred             eEEEEEec--CCCCCCCCCEEecc--CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEE
Confidence            89999994  58899999999865  89999999999999999985  4454  6789999999999977766 999999


Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNL  312 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~  312 (362)
                      ||+|++|++|++++|+|+..|++|+++++++++.+.+ +++|+++++|+.+.++.+.+.+.+++++|++|||+|++.++.
T Consensus       154 lI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~  233 (336)
T 4b7c_A          154 VISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDT  233 (336)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCcchHHH
Confidence            9999999999999999999999999999999999999 899999999999989888888877789999999999999999


Q ss_pred             HHHHhccCCEEEEEcCcccccCCC-CCCCCChhhHHHHHHhcCeEEEEec
Q 018013          313 CLKALAVYGRLIVIGMISQYQGEH-GWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       313 ~~~~l~~~G~~v~~G~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++++++|+++.+|..+.+.... ...+.+    ...++.|++++.|++
T Consensus       234 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~----~~~~~~~~~~i~g~~  279 (336)
T 4b7c_A          234 VLTRIAFKARIVLCGAISQYNNKEAVRGPAN----YLSLLVNRARMEGMV  279 (336)
T ss_dssp             HHTTEEEEEEEEECCCGGGGC------CCTT----TTHHHHTTCEEEECC
T ss_pred             HHHHHhhCCEEEEEeecccccCCcccccchh----HHHHHhCCcEEEEEE
Confidence            999999999999999987543211 011111    125789999999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=4.7e-41  Score=318.18  Aligned_cols=254  Identities=23%  Similarity=0.335  Sum_probs=217.2

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.+    +++++.|.| +++++||+|||.++|||++|++++.|.++...   ...+|.++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~----l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~---~~~~p~v~G~E~~G~V~~v   72 (343)
T 2dq4_A            1 MRALAKLAPEEG----LTLVDRPVP-EPGPGEILVRVEAASICGTDLHIWKWDAWARG---RIRPPLVTGHEFSGVVEAV   72 (343)
T ss_dssp             CEEEEECSSSSS----CEEEECCCC-CCCTTEEEEEEEEEECCHHHHHHHTTCHHHHH---HCCSSEECCCEEEEEEEEE
T ss_pred             CeEEEEeCCCCc----EEEEeccCC-CCCCCEEEEEEEEEeechhhHHHHcCCCCccc---cCCCCCcCCccceEEEEEE
Confidence            789999877642    788999999 78999999999999999999999988653100   1356889999999999999


Q ss_pred             CCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHH
Q 018013          167 GDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLT  217 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~t  217 (362)
                      |++|++|++||||++.                            ..|+|+||+++|++.++++|++ +.+.|++..++.|
T Consensus        73 G~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~t  152 (343)
T 2dq4_A           73 GPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGN  152 (343)
T ss_dssp             CTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHH
T ss_pred             CCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHH
Confidence            9999999999999984                            3599999999999999999986 4555555578889


Q ss_pred             HHHHHH-HhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          218 ASIALE-QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       218 A~~al~-~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      ||+++. .... +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++ +++++++.++++.+.+++.++
T Consensus       153 a~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~  229 (343)
T 2dq4_A          153 AVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTG  229 (343)
T ss_dssp             HHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHS
T ss_pred             HHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcC
Confidence            999998 6666 9999999998 9999999999999999 999999999999999999 999999998888777766557


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHH-HHHHhcCeEEEEec
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLC-EKILAKSQTVVCIH  361 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~i~G~~  361 (362)
                      +++|+|||++|+ +.++.++++|+++|+++.+|..... .       .++  . ..++.|++++.|++
T Consensus       230 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~-------~~~--~~~~~~~~~~~i~g~~  287 (343)
T 2dq4_A          230 SGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDP-I-------RFD--LAGELVMRGITAFGIA  287 (343)
T ss_dssp             SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-E-------EEC--HHHHTGGGTCEEEECC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-c-------eeC--cHHHHHhCceEEEEee
Confidence            789999999997 7899999999999999999985421 1       111  2 35788999999975

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.7e-41  Score=320.50  Aligned_cols=258  Identities=25%  Similarity=0.373  Sum_probs=211.1

Q ss_pred             cccCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCc
Q 018013           79 LNVQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFE  158 (362)
Q Consensus        79 ~~~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e  158 (362)
                      +......+|+++....++    +.+++++.|.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||
T Consensus        15 ~~~~~~~~~~a~~~~~~~----~~l~~~~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~P~v~GhE   83 (369)
T 1uuf_A           15 LYKKAGLKIKAVGAYSAK----QPLEPMDITRR-EPGPNDVKIEIAYCGVCHSDLHQVRSEWA------GTVYPCVPGHE   83 (369)
T ss_dssp             --------CEEEEBSSTT----SCCEEEECCCC-CCCTTEEEEEEEEEECCHHHHHHHHCTTS------CCCSSBCCCCC
T ss_pred             hhHhcCceEEEEEEcCCC----CCcEEEEecCC-CCCCCeEEEEEEEEeecHHHHHHhcCCCC------CCCCCeecccC
Confidence            333445678998876443    35889999999 88999999999999999999999988653      23578999999


Q ss_pred             eEEEEEEeCCCCCCCCCCCeEEEe-------------------------------------cCCCeeeEEEeeCCCeeeC
Q 018013          159 AVGLIAAVGDSVNNVKVGTPAAIM-------------------------------------TFGSYAEFTMVPSKHILPV  201 (362)
Q Consensus       159 ~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------------~~g~~~~~~~v~~~~~~~i  201 (362)
                      ++|+|+++|++|++|++||||++.                                     ..|+|+||+++|++.++++
T Consensus        84 ~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~  163 (369)
T 1uuf_A           84 IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRI  163 (369)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEEC
T ss_pred             ceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEEC
Confidence            999999999999999999999852                                     2489999999999999999


Q ss_pred             CCC-C--HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE
Q 018013          202 ARP-D--PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV  278 (362)
Q Consensus       202 p~~-~--~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v  278 (362)
                      |++ .  .++|+++.+++|||+++.+...++|++|||+|+ |++|++++|+|+.+|++|+++++++++.++++++|++++
T Consensus       164 P~~~ls~~~aa~l~~~~~tA~~al~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~v  242 (369)
T 1uuf_A          164 RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV  242 (369)
T ss_dssp             CSCGGGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE
Confidence            987 3  456778899999999999875599999999995 999999999999999999999999999999999999999


Q ss_pred             EeCCCccHHHHHHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEE
Q 018013          279 INYKAEDIKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV  357 (362)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i  357 (362)
                      +++.+.++.+.   .. +++|+|||++|+. .++.++++|+++|+++.+|.......       .++  ...++.|++++
T Consensus       243 i~~~~~~~~~~---~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~-------~~~--~~~~~~~~~~i  309 (369)
T 1uuf_A          243 VNSRNADEMAA---HL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHK-------SPE--VFNLIMKRRAI  309 (369)
T ss_dssp             EETTCHHHHHT---TT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC--------------C--HHHHHTTTCEE
T ss_pred             eccccHHHHHH---hh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCcc-------ccC--HHHHHhCCcEE
Confidence            99887553322   22 5899999999974 78999999999999999998654210       111  23578899999


Q ss_pred             EEec
Q 018013          358 VCIH  361 (362)
Q Consensus       358 ~G~~  361 (362)
                      .|++
T Consensus       310 ~g~~  313 (369)
T 1uuf_A          310 AGSM  313 (369)
T ss_dssp             EECC
T ss_pred             EEee
Confidence            9975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.3e-41  Score=315.87  Aligned_cols=256  Identities=21%  Similarity=0.315  Sum_probs=210.8

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .+||+++++.++.+  ..+++++.+.| +++++||+|||.++|||++|++++.|.++.     ...+|.++|||++|+|+
T Consensus         2 ~~mka~~~~~~g~~--~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~v~G~E~~G~V~   73 (328)
T 1xa0_A            2 SAFQAFVVNKTETE--FTAGVQTISMD-DLPEGDVLVRVHYSSVNYKDGLASIPDGKI-----VKTYPFVPGIDLAGVVV   73 (328)
T ss_dssp             CEEEEEEEEEETTE--EEEEEEEEEGG-GSCSCSEEEEEEEEECCHHHHHHTSGGGSS-----CCSSSBCCCSEEEEEEE
T ss_pred             CcceEEEEecCCCc--ceeEEEeccCC-CCCCCeEEEEEEEEecCHHHHHhhcCCCCC-----CCCCCcccCcceEEEEE
Confidence            36999999987632  24788899998 789999999999999999999999886532     23578999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEe-------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHh--CC-CCCC-
Q 018013          165 AVGDSVNNVKVGTPAAIM-------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQA--GP-ASGK-  231 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~-------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~--~~-~~g~-  231 (362)
                      ++  ++++|++||||++.       ..|+|+||+++|++.++++|++  +.++++++.++.|||.+|...  .. ++|+ 
T Consensus        74 ~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~  151 (328)
T 1xa0_A           74 SS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERG  151 (328)
T ss_dssp             EC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             ec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCc
Confidence            96  56899999999976       3699999999999999999985  567778888899999887532  33 8886 


Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFN  311 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~  311 (362)
                      +|||+|++|++|++++|+|+..|++|+++++++++.++++++|+++++|+.+.+ .+.++...++++|++|||+|++.++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~~~~~~~d~vid~~g~~~~~  230 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRPLDKQRWAAAVDPVGGRTLA  230 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------CCSCCEEEEEECSTTTTHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-HHHHHHhcCCcccEEEECCcHHHHH
Confidence            999999999999999999999999999999999999999999999999987644 3344445566899999999998999


Q ss_pred             HHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          312 LCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       312 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .++++++++|+++.+|..++....  +   ++    ..++.|++++.|+
T Consensus       231 ~~~~~l~~~G~~v~~G~~~~~~~~--~---~~----~~~~~~~~~i~g~  270 (328)
T 1xa0_A          231 TVLSRMRYGGAVAVSGLTGGAEVP--T---TV----HPFILRGVSLLGI  270 (328)
T ss_dssp             HHHHTEEEEEEEEECSCCSSSCCC--C---CS----HHHHHTTCEEEEC
T ss_pred             HHHHhhccCCEEEEEeecCCCCCC--C---ch----hhhhhcCceEEEE
Confidence            999999999999999987642221  1   11    2467899999997

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=2.3e-40  Score=315.14  Aligned_cols=273  Identities=21%  Similarity=0.294  Sum_probs=224.3

Q ss_pred             CCCccceEEEE-ecc---CCCccCceEEEeccCCCCC-CCCeEEEEEeEEeeChhhhhhhcCCc--cCCCCCCCCCCCCC
Q 018013           82 QLPESFEKLVV-HTL---NHNFRDATIKVRAPLRLPI-KPNHVLVKIIFAGVNASDVNFSSGRY--FSDGNDIGSRLPFD  154 (362)
Q Consensus        82 ~~p~~~~a~~~-~~~---~~~~~~~~~~~~~~~p~~~-~~~eV~V~v~~~~i~~~D~~~~~g~~--~~~~~~~~~~~p~~  154 (362)
                      .+|.+||++++ +.+   +.+..+.+++++.+.| ++ +++||+|||.++|||++|++.+.|..  ...   ....+|.+
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P-~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~---~~~~~p~v   79 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLP-DNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYI---TPWQLSQV   79 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECC-SCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSS---CCCCBTSB
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCC-CCCCCCeEEEEEEEEecCHHHHhhcccccccccc---CCCCCCcc
Confidence            56788999999 444   2211245899999999 66 99999999999999999998776521  000   02356889


Q ss_pred             CCCceEEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCCC------HHHHHhhhhHHHHHHHHHHhCC-
Q 018013          155 AGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPD------PEVVAMLTSGLTASIALEQAGP-  227 (362)
Q Consensus       155 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~~------~~~a~l~~~~~tA~~al~~~~~-  227 (362)
                      +|||++|+|++  ++|++|++||||++.. |+|+||+++|++.++++|++.      .++++++.+++|||+++.+... 
T Consensus        80 ~G~E~~G~V~~--~~v~~~~vGdrV~~~~-G~~aey~~v~~~~~~~iP~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~  156 (357)
T 2zb4_A           80 VDGGGIGIIEE--SKHTNLTKGDFVTSFY-WPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHI  156 (357)
T ss_dssp             CEEEEEEEEEE--ECSTTCCTTCEEEEEE-EESBSEEEEEGGGCEECCGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCC
T ss_pred             ccccEEEEEEe--cCCCCCCCCCEEEecC-CCcEEEEEEchHHceecCcccccCchhHHHHhcccHHHHHHHHHHHhcCC
Confidence            99999999999  8999999999999875 899999999999999999753      3467888999999999966666 


Q ss_pred             CCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASG--KKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g--~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      ++|  ++|||+|++|++|++++|+++..|+ +|+++++++++.+.+++ +|+++++|+.+.++.+.+.+..++++|++||
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~  236 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFD  236 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCEEEE
Confidence            999  9999999999999999999999999 99999999999999986 9999999998888877777766558999999


Q ss_pred             CCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          304 SVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       304 ~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      |+|+..++.++++++++|+++.+|..+.+....++.+...+.....++.|++++.|++
T Consensus       237 ~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~  294 (357)
T 2zb4_A          237 NVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFL  294 (357)
T ss_dssp             SCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECC
T ss_pred             CCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEee
Confidence            9999999999999999999999999876433222222222223346889999999974

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2e-40  Score=315.51  Aligned_cols=254  Identities=21%  Similarity=0.303  Sum_probs=214.0

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      .+|++|++++.+...    +.+++++.+.| +++++||+|||.++|||++|++.+.|.++      ...+|.++|||++|
T Consensus         5 ~~~m~~~a~~~~~~~----~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~P~v~GhE~~G   73 (357)
T 2cf5_A            5 EAERKTTGWAARDPS----GILSPYTYTLR-ETGPEDVNIRIICCGICHTDLHQTKNDLG------MSNYPMVPGHEVVG   73 (357)
T ss_dssp             -CCCEEEEEEECSTT----CCEEEEEEECC-CCCTTEEEEEEEEEEECHHHHHHHTCTTT------CCCSSBCCCCEEEE
T ss_pred             cCcceeEEEEEccCC----CCcEEEEecCC-CCCCCEEEEEEEEEeecchhhhhhcCCCC------CCCCCeecCcceeE
Confidence            456678888776543    34888999999 88999999999999999999999988653      13578999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEe------------------------------------cCCCeeeEEEeeCCCeeeCCCC-
Q 018013          162 LIAAVGDSVNNVKVGTPAAIM------------------------------------TFGSYAEFTMVPSKHILPVARP-  204 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~------------------------------------~~g~~~~~~~v~~~~~~~ip~~-  204 (362)
                      +|+++|++|++|++||||++.                                    ..|+|+||+++|++.++++|++ 
T Consensus        74 ~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l  153 (357)
T 2cf5_A           74 EVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGM  153 (357)
T ss_dssp             EEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSC
T ss_pred             EEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCC
Confidence            999999999999999999752                                    3599999999999999999985 


Q ss_pred             -CHHHHHhhhhHHHHHHHHHHhCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeC
Q 018013          205 -DPEVVAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINY  281 (362)
Q Consensus       205 -~~~~a~l~~~~~tA~~al~~~~~~-~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~  281 (362)
                       +.++|+++.++.|||+++.+...+ +|++|||+| +|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++
T Consensus       154 s~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~  232 (357)
T 2cf5_A          154 AVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIG  232 (357)
T ss_dssp             CHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEET
T ss_pred             CHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeecc
Confidence             566778899999999999887666 999999999 599999999999999999999999999999988 9999999998


Q ss_pred             CCccHHHHHHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          282 KAEDIKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       282 ~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .+.   +.+++.. +++|+|||++|+. .++.++++++++|+++.+|.......       .++  .. ++.|++++.|+
T Consensus       233 ~~~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~-------~~~--~~-~~~~~~~i~g~  298 (357)
T 2cf5_A          233 SDQ---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQ-------FLT--PL-LMLGRKVITGS  298 (357)
T ss_dssp             TCH---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCC-------CCH--HH-HHHHTCEEEEC
T ss_pred             ccH---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCcc-------ccC--HH-HHhCccEEEEE
Confidence            763   2333333 4799999999974 78999999999999999998653211       122  22 78899999997


Q ss_pred             c
Q 018013          361 H  361 (362)
Q Consensus       361 ~  361 (362)
                      +
T Consensus       299 ~  299 (357)
T 2cf5_A          299 F  299 (357)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=8.4e-41  Score=318.13  Aligned_cols=252  Identities=18%  Similarity=0.235  Sum_probs=213.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCC---CCCCCCceEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRL---PFDAGFEAVGLI  163 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~---p~~~G~e~~G~V  163 (362)
                      ||+++++.++.    .+++++.|.| +++++||+|||.++|||++|++++.|.++.      ..+   |.++|||++| |
T Consensus         1 MkA~~~~~~~~----~l~~~~~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~------~~~~~~p~v~G~E~~G-V   68 (357)
T 2b5w_A            1 MKAIAVKRGED----RPVVIEKPRP-EPESGEALVRTLRVGVCGTDHEVIAGGHGG------FPEGEDHLVLGHEAVG-V   68 (357)
T ss_dssp             CEEEEEETTCS----SCEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHSCSTT------SCTTCSEEECCSEEEE-E
T ss_pred             CeEEEEeCCCC----ceEEEECCCC-CCCcCEEEEEEeEEeechhcHHHHcCCCCC------CCCCCCCcccCceeEE-E
Confidence            78999987664    3788999999 789999999999999999999999987542      345   8899999999 9


Q ss_pred             EEeCCCCCCCCCCCeEEEe-----------------------------c----CCCeeeEEEeeCCCeeeCCCC-CHHHH
Q 018013          164 AAVGDSVNNVKVGTPAAIM-----------------------------T----FGSYAEFTMVPSKHILPVARP-DPEVV  209 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~-----------------------------~----~g~~~~~~~v~~~~~~~ip~~-~~~~a  209 (362)
                      +++|++ ++|++||||++.                             .    .|+|+||+++|++.++++|++ + ++|
T Consensus        69 ~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~a  146 (357)
T 2b5w_A           69 VVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELG  146 (357)
T ss_dssp             EEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTG
T ss_pred             EEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhh
Confidence            999999 999999999975                             1    499999999999999999985 5 778


Q ss_pred             HhhhhHHHHHHHHHHhCCCCC------CEEEEEcCCchHHHHH-HHHH-HHCCCE-EEEecCCHh---HHHHHHHcCCcE
Q 018013          210 AMLTSGLTASIALEQAGPASG------KKVLVTAAAGGTGQFA-VQLA-KLAGNT-VVATCGGEH---KAQLLKELGVDR  277 (362)
Q Consensus       210 ~l~~~~~tA~~al~~~~~~~g------~~VlI~ga~g~vG~~a-iqla-~~~G~~-Vi~~~~~~~---~~~~l~~~g~~~  277 (362)
                      +++.+++|||+++.....++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   |.++++++|+++
T Consensus       147 al~~~~~ta~~al~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~  225 (357)
T 2b5w_A          147 FLIEPISITEKALEHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATY  225 (357)
T ss_dssp             GGHHHHHHHHHHHHHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEE
T ss_pred             hhhchHHHHHHHHHhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcc
Confidence            899999999999965444899      99999997 9999999 9999 999996 999999998   999999999999


Q ss_pred             EEeCCCccHHHHHHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeE
Q 018013          278 VINYKAEDIKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQT  356 (362)
Q Consensus       278 v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  356 (362)
                      + |++++++.+ +++. ++++|+|||++|+. .++.++++++++|+++.+|..+....  .   .+...++..++.|+++
T Consensus       226 v-~~~~~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~--~---~~~~~~~~~~~~~~~~  297 (357)
T 2b5w_A          226 V-DSRQTPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAF--E---VDAGAFHREMVLHNKA  297 (357)
T ss_dssp             E-ETTTSCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCC--C---CCHHHHHHHHHHTTCE
T ss_pred             c-CCCccCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCc--e---ecHHHHhHHHHhCCeE
Confidence            9 998877766 6555 44899999999975 88999999999999999998763111  1   1221111122899999


Q ss_pred             EEEec
Q 018013          357 VVCIH  361 (362)
Q Consensus       357 i~G~~  361 (362)
                      +.|++
T Consensus       298 i~g~~  302 (357)
T 2b5w_A          298 LVGSV  302 (357)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            99975

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2.4e-40  Score=313.80  Aligned_cols=259  Identities=28%  Similarity=0.383  Sum_probs=219.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCC--CCCCCCCCCCCCCCceEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSD--GNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~--~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      ||+++++.++.+    +++++.|.| +++++||+|||.++|||++|++++.|.++..  .......+|.++|||++|+|+
T Consensus         1 Mka~~~~~~g~~----l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~   75 (347)
T 1jvb_A            1 MRAVRLVEIGKP----LSLQEIGVP-KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIE   75 (347)
T ss_dssp             CEEEEECSTTSC----CEEEECCCC-CCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEE
T ss_pred             CeEEEEecCCCC----eEEEEeeCC-CCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEE
Confidence            789999876532    788999999 7899999999999999999999998865310  000023578999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEeeC-CCeeeCCCC--CHHHHHhhh
Q 018013          165 AVGDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVPS-KHILPVARP--DPEVVAMLT  213 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~~-~~~~~ip~~--~~~~a~l~~  213 (362)
                      ++|++|++|++||||++.                            ..|+|+||+++|+ +.++++ ++  +.++++++.
T Consensus        76 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~  154 (347)
T 1jvb_A           76 EVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTC  154 (347)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGT
T ss_pred             EECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchh
Confidence            999999999999999764                            2589999999999 999999 74  556778899


Q ss_pred             hHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHH
Q 018013          214 SGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE  292 (362)
Q Consensus       214 ~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~  292 (362)
                      ++.|||+++.+...++|++|||+|++|++|++++|+++.. |++|+++++++++.+.++++|+++++++.+.++.+.+.+
T Consensus       155 ~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  234 (347)
T 1jvb_A          155 SGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRR  234 (347)
T ss_dssp             HHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHH
Confidence            9999999998754599999999998889999999999999 999999999999999999999999999988887766666


Q ss_pred             HCC-CceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          293 EFP-KGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       293 ~~~-~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ... +++|++||++|+. .++.++++|+++|+++.+|...... .  +   +    ...++.|++++.|++
T Consensus       235 ~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~--~---~----~~~~~~~~~~i~g~~  295 (347)
T 1jvb_A          235 ITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-H--Y---H----APLITLSEIQFVGSL  295 (347)
T ss_dssp             HTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-C--C---C----HHHHHHHTCEEEECC
T ss_pred             HhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-C--C---C----HHHHHhCceEEEEEe
Confidence            654 5899999999975 8899999999999999999866211 1  1   1    225788999999975

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.3e-41  Score=320.32  Aligned_cols=258  Identities=21%  Similarity=0.301  Sum_probs=213.2

Q ss_pred             CCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           83 LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      ||.+||+++++.++..  ..+++++.|.| +++++||+|||.++|||++|++.+.|.++.     ...+|.++|||++|+
T Consensus         1 m~~~mka~~~~~~g~~--~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~i~G~E~~G~   72 (330)
T 1tt7_A            1 MSTLFQALQAEKNADD--VSVHVKTISTE-DLPKDGVLIKVAYSGINYKDGLAGKAGGNI-----VREYPLILGIDAAGT   72 (330)
T ss_dssp             -CCEEEEEEECCGGGS--CCCEEEEEESS-SSCSSSEEEEECCEEECHHHHHHTSTTCTT-----CSSCSEECCSEEEEE
T ss_pred             CCCcceEEEEecCCCC--cceeEeecCCC-CCCCCEEEEEEEEEecCHHHHhhhcCCCCC-----cCCCCccccceEEEE
Confidence            3567999999886632  34788999999 789999999999999999999999886532     235788999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEe-------cCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHh--CC-CCC
Q 018013          163 IAAVGDSVNNVKVGTPAAIM-------TFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQA--GP-ASG  230 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~-------~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~--~~-~~g  230 (362)
                      |+++  ++++|++||||++.       ..|+|+||+++|++.++++|++  +.++++++..+.|||.++...  .. ++|
T Consensus        73 V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g  150 (330)
T 1tt7_A           73 VVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPE  150 (330)
T ss_dssp             EEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred             EEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCC
Confidence            9996  46899999999976       3699999999999999999985  567778888899999887532  33 888


Q ss_pred             C-EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          231 K-KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       231 ~-~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      + +|||+|++|++|++++|+|+..|++|+++++++++++.++++|+++++|+++.+ .+.++...++++|++|||+|++.
T Consensus       151 ~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~~~~~~~d~vid~~g~~~  229 (330)
T 1tt7_A          151 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKALSKQQWQGAVDPVGGKQ  229 (330)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCSSCCCCEEEEEESCCTHH
T ss_pred             CceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHHhhcCCccEEEECCcHHH
Confidence            6 999999999999999999999999999999999999999999999999865322 11122234568999999999999


Q ss_pred             HHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          310 FNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       310 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++.++++++++|+++.+|..+.....  +   +    ...++.|++++.|+
T Consensus       230 ~~~~~~~l~~~G~iv~~G~~~~~~~~--~---~----~~~~~~~~~~i~g~  271 (330)
T 1tt7_A          230 LASLLSKIQYGGSVAVSGLTGGGEVP--A---T----VYPFILRGVSLLGI  271 (330)
T ss_dssp             HHHHHTTEEEEEEEEECCCSSCSCEE--E---C----SHHHHTSCCEEEEC
T ss_pred             HHHHHHhhcCCCEEEEEecCCCCccC--c---c----hHHHHhcCeEEEEE
Confidence            99999999999999999987642211  1   1    12477899999997

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.7e-40  Score=314.39  Aligned_cols=252  Identities=23%  Similarity=0.288  Sum_probs=210.0

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .+||+++++.++.    .+++++.+.| +++++||+|||.++|||++|++++.|.++.    ....+|.++|||++|+|+
T Consensus         2 ~~mka~~~~~~g~----~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~----~~~~~p~i~G~E~~G~V~   72 (344)
T 2h6e_A            2 VKSKAALLKKFSE----PLSIEDVNIP-EPQGEEVLIRIGGAGVCRTDLRVWKGVEAK----QGFRLPIILGHENAGTIV   72 (344)
T ss_dssp             EEEEBCEECSCCC---------EEEEC-CCCTTCEEEEEEEEECCHHHHHHHTTSCCC----TTCCSSEECCCCEEEEEE
T ss_pred             ceeEEEEEecCCC----CCeEEEeeCC-CCCCCEEEEEEEEEEechhhHHHHcCCCcc----cCCCCCccccccceEEEE
Confidence            3699999987753    2778888888 789999999999999999999999886531    023578999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEe----------------------------cCCCeeeEEEee-CCCeeeCCCC--CHHHHHhhh
Q 018013          165 AVGDSVNNVKVGTPAAIM----------------------------TFGSYAEFTMVP-SKHILPVARP--DPEVVAMLT  213 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~----------------------------~~g~~~~~~~v~-~~~~~~ip~~--~~~~a~l~~  213 (362)
                      ++|++ ++|++||||++.                            ..|+|+||+++| ++.++++ ++  +.++|+++.
T Consensus        73 ~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~  150 (344)
T 2h6e_A           73 EVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLAD  150 (344)
T ss_dssp             EECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGT
T ss_pred             EECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhh
Confidence            99999 999999999875                            259999999999 9999999 74  566778899


Q ss_pred             hHHHHHHHHHHh-----CCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHcCCcEEEeCCC-cc
Q 018013          214 SGLTASIALEQA-----GPASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKELGVDRVINYKA-ED  285 (362)
Q Consensus       214 ~~~tA~~al~~~-----~~~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~  285 (362)
                      ++.|||+++...     .. +|++|||+|+ |++|++++|+|+.+  |++|+++++++++.++++++|+++++++++ ++
T Consensus       151 ~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~  228 (344)
T 2h6e_A          151 AGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAES  228 (344)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHH
T ss_pred             hhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchH
Confidence            999999999887     77 9999999997 99999999999999  999999999999999999999999998765 44


Q ss_pred             HHHHHHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          286 IKTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       286 ~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +.+.+  ..++++|+|||++|+. .++.++++++++|+++.+|......   .+   +    ...++.|++++.|++
T Consensus       229 ~~~~~--~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~---~~---~----~~~~~~~~~~i~g~~  293 (344)
T 2h6e_A          229 LINKL--TDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRV---SL---E----AFDTAVWNKKLLGSN  293 (344)
T ss_dssp             HHHHH--HTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCC---CC---C----HHHHHHTTCEEEECC
T ss_pred             HHHHh--hcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCc---cc---C----HHHHhhCCcEEEEEe
Confidence            32222  2355899999999986 8999999999999999999865321   11   1    225788999999975

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=5.1e-40  Score=317.14  Aligned_cols=261  Identities=18%  Similarity=0.226  Sum_probs=213.0

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCC-CC-----CeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPI-KP-----NHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~-~~-----~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      +||+++++.++     .+++++.+.| ++ ++     +||+|||.++|||++|++++.|.+       ...+|.++|||+
T Consensus         2 ~MkA~~~~~~~-----~l~~~~~p~P-~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~-------~~~~p~v~GhE~   68 (398)
T 2dph_A            2 GNKSVVYHGTR-----DLRVETVPYP-KLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF-------IVPKGHVLGHEI   68 (398)
T ss_dssp             CEEEEEEEETT-----EEEEEEECCC-CSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS-------CCCTTCBCCCCE
T ss_pred             ccEEEEEEcCC-----CEEEEEccCC-CCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC-------CCCCCcccCCce
Confidence            59999998754     3788999988 55 67     999999999999999999998864       235788999999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEe---------------------------------------cCCCeeeEEEeeCC--Ce
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIM---------------------------------------TFGSYAEFTMVPSK--HI  198 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------~~g~~~~~~~v~~~--~~  198 (362)
                      +|+|+++|++|++|++||||++.                                       ..|+|+||+++|++  .+
T Consensus        69 ~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~  148 (398)
T 2dph_A           69 TGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYML  148 (398)
T ss_dssp             EEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHC
T ss_pred             EEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeE
Confidence            99999999999999999999863                                       24899999999987  89


Q ss_pred             eeCCCC--CHH----HHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH
Q 018013          199 LPVARP--DPE----VVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK  271 (362)
Q Consensus       199 ~~ip~~--~~~----~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~  271 (362)
                      +++|++  +.+    +++++.++.|||+++.....++|++|||+| +|++|++++|+|+.+|+ +|++++++++++++++
T Consensus       149 ~~iP~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  227 (398)
T 2dph_A          149 LKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS  227 (398)
T ss_dssp             EECSSHHHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred             EECCCCCChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            999985  344    677888999999999655449999999999 59999999999999999 9999999999999999


Q ss_pred             HcCCcEEEeCCCccH-HHHHHHHC-CCceeEEEECCChH---------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          272 ELGVDRVINYKAEDI-KTVFKEEF-PKGFDIIYESVGGD---------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       272 ~~g~~~v~~~~~~~~-~~~~~~~~-~~g~Dvvid~~g~~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      ++|++ ++++.+.++ .+.+++.+ +.++|+|||++|+.               .++.++++|+++|+++.+|.......
T Consensus       228 ~lGa~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~  306 (398)
T 2dph_A          228 DAGFE-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDP  306 (398)
T ss_dssp             TTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCS
T ss_pred             HcCCc-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccc
Confidence            99996 889887764 66665554 45899999999974               68999999999999999998632111


Q ss_pred             CCCCC---CCChhhHHHHHHhcCeEEEEec
Q 018013          335 EHGWQ---PSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       335 ~~~~~---~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ...+.   ....+.....++.|++++.|++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~  336 (398)
T 2dph_A          307 DPVNKDAGSGRLHLDFGKMWTKSIRIMTGM  336 (398)
T ss_dssp             SCSSHHHHTTEEEEEHHHHHHTTCEEECSS
T ss_pred             ccccccccCCcccccHHHHhhcCCEEEEec
Confidence            00000   0011112335788999998864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=8.3e-40  Score=313.28  Aligned_cols=245  Identities=26%  Similarity=0.375  Sum_probs=206.4

Q ss_pred             CCCccceEEEEeccCCCccCceEE-EeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCC---------CCCCCCCC
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIK-VRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSD---------GNDIGSRL  151 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~---------~~~~~~~~  151 (362)
                      .++.+|++++++.++..  +.+++ ++.+.|.+++++||+|||.++|||++|++++.|.++..         .......+
T Consensus        17 ~~~~~mka~~~~~~g~~--~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~   94 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKN--EVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEF   94 (375)
T ss_dssp             -CCCCEEEEEBSSCCSG--GGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTC
T ss_pred             ccCccceeEEeccCCCc--cceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccC
Confidence            45678999999887632  34778 88888833599999999999999999999998864210         00011347


Q ss_pred             CCCCCCceEEEEEEeCCCCCCCCCCCeEEEec----CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHH-
Q 018013          152 PFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT----FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQ-  224 (362)
Q Consensus       152 p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~-  224 (362)
                      |.++|||++|+|+++|++|++|++||+|++..    .|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+ 
T Consensus        95 P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~  174 (375)
T 2vn8_A           95 PLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKV  174 (375)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTT
T ss_pred             CcccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999875    699999999999999999985  56677788889999999964 


Q ss_pred             hC----CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeE
Q 018013          225 AG----PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       225 ~~----~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      ..    .++|++|||+||+|++|++++|+|+..|++|++++ ++++.+.++++|+++++|+.+.++.+.+.+.  .++|+
T Consensus       175 ~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~--~g~D~  251 (375)
T 2vn8_A          175 GGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSL--KPFDF  251 (375)
T ss_dssp             TCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTS--CCBSE
T ss_pred             cccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhc--CCCCE
Confidence            44    58999999999999999999999999999999998 5788999999999999999888877665542  57999


Q ss_pred             EEECCChH--HHHHHHHHhccCCEEEEEcCccc
Q 018013          301 IYESVGGD--MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       301 vid~~g~~--~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|||+|+.  .++.++++++++|+++.+|....
T Consensus       252 vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~  284 (375)
T 2vn8_A          252 ILDNVGGSTETWAPDFLKKWSGATYVTLVTPFL  284 (375)
T ss_dssp             EEESSCTTHHHHGGGGBCSSSCCEEEESCCSHH
T ss_pred             EEECCCChhhhhHHHHHhhcCCcEEEEeCCCcc
Confidence            99999986  45888999999999999997653

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=4.2e-39  Score=307.36  Aligned_cols=251  Identities=21%  Similarity=0.294  Sum_probs=210.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |+++.+...+.  ...+++++.+.| +++++||+|||.++|||++|++++.|.++      ...+|.++|||++|+|+++
T Consensus        15 mk~~~~~~~~~--~~~l~~~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~------~~~~P~v~GhE~~G~V~~v   85 (366)
T 1yqd_A           15 VKAFGWAARDQ--SGHLSPFNFSRR-ATGEEDVRFKVLYCGVCHSDLHSIKNDWG------FSMYPLVPGHEIVGEVTEV   85 (366)
T ss_dssp             EEEEEEEECST--TCCEEEEEEEEC-CCCTTEEEEEEEEEEECHHHHHHHHTSSS------CCCSSBCCCCCEEEEEEEE
T ss_pred             eeEEEEEEcCC--CCCcEEEEccCC-CCCCCeEEEEEEEEeechhhHHHHcCCCC------CCCCCEecccceEEEEEEE
Confidence            55555554432  235888999999 89999999999999999999999988653      2457899999999999999


Q ss_pred             CCCCCCCCCCCeEEEe------------------------------------cCCCeeeEEEeeCCCeeeCCCC--CHHH
Q 018013          167 GDSVNNVKVGTPAAIM------------------------------------TFGSYAEFTMVPSKHILPVARP--DPEV  208 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~------------------------------------~~g~~~~~~~v~~~~~~~ip~~--~~~~  208 (362)
                      |++|++|++||||++.                                    ..|+|+||+++|++.++++|++  +.++
T Consensus        86 G~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~a  165 (366)
T 1yqd_A           86 GSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGG  165 (366)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTT
T ss_pred             CCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHh
Confidence            9999999999999852                                    3589999999999999999985  5677


Q ss_pred             HHhhhhHHHHHHHHHHhCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeCCCccH
Q 018013          209 VAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAEDI  286 (362)
Q Consensus       209 a~l~~~~~tA~~al~~~~~~-~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~~~  286 (362)
                      |+++.++.|||+++.+...+ +|++|||+| +|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+.+.+ 
T Consensus       166 a~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~-  243 (366)
T 1yqd_A          166 APLLCAGITVYSPLKYFGLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQE-  243 (366)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHH-
T ss_pred             hhhhhhHHHHHHHHHhcCcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHH-
Confidence            88899999999999887666 999999999 599999999999999999999999999998887 89999999987642 


Q ss_pred             HHHHHHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          287 KTVFKEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       287 ~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                        .+++.. +++|+|||++|+. .++.++++|+++|+++.+|.......        ++  ...++.|++++.|++
T Consensus       244 --~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~--------~~--~~~~~~~~~~i~g~~  306 (366)
T 1yqd_A          244 --QMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLE--------LP--AFSLIAGRKIVAGSG  306 (366)
T ss_dssp             --HHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEE--------EC--HHHHHTTTCEEEECC
T ss_pred             --HHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCC--------cC--HHHHHhCCcEEEEec
Confidence              333344 4799999999974 68999999999999999998653211        11  235788999999975

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-39  Score=312.71  Aligned_cols=260  Identities=19%  Similarity=0.223  Sum_probs=211.0

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCC-CCe------EEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCc
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIK-PNH------VLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFE  158 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~-~~e------V~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e  158 (362)
                      +||+++++.++     .+++++.|.| +++ ++|      |+|||.++|||++|++++.|.++       ..+|.++|||
T Consensus         2 ~Mka~~~~~~~-----~l~~~~~p~P-~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-------~~~p~v~GhE   68 (398)
T 1kol_A            2 GNRGVVYLGSG-----KVEVQKIDYP-KMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-------AQVGLVLGHE   68 (398)
T ss_dssp             CEEEEEEEETT-----EEEEEEECCC-CSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-------CCTTCBCCCC
T ss_pred             ccEEEEEecCC-----ceEEEEecCC-CCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-------CCCCcccCcc
Confidence            69999998754     3788999998 676 888      99999999999999999988642       3468899999


Q ss_pred             eEEEEEEeCCCCCCCCCCCeEEEe--------------------------------------cCCCeeeEEEeeCC--Ce
Q 018013          159 AVGLIAAVGDSVNNVKVGTPAAIM--------------------------------------TFGSYAEFTMVPSK--HI  198 (362)
Q Consensus       159 ~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~g~~~~~~~v~~~--~~  198 (362)
                      ++|+|+++|++|++|++||||++.                                      ..|+|+||+++|+.  .+
T Consensus        69 ~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~  148 (398)
T 1kol_A           69 ITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL  148 (398)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHC
T ss_pred             cEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeE
Confidence            999999999999999999999842                                      24899999999987  89


Q ss_pred             eeCCCC--CHH----HHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH
Q 018013          199 LPVARP--DPE----VVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK  271 (362)
Q Consensus       199 ~~ip~~--~~~----~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~  271 (362)
                      +++|++  +.+    +++++.++.|||+++.....++|++|||+| +|++|++++|+|+.+|+ +|++++++++|+++++
T Consensus       149 ~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~  227 (398)
T 1kol_A          149 LKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK  227 (398)
T ss_dssp             EECSCHHHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             EECCCCcchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH
Confidence            999985  344    578888999999999865459999999999 69999999999999999 7999999999999999


Q ss_pred             HcCCcEEEeCCCcc-HHHHHHHH-CCCceeEEEECCChH----------------HHHHHHHHhccCCEEEEEcCcc-cc
Q 018013          272 ELGVDRVINYKAED-IKTVFKEE-FPKGFDIIYESVGGD----------------MFNLCLKALAVYGRLIVIGMIS-QY  332 (362)
Q Consensus       272 ~~g~~~v~~~~~~~-~~~~~~~~-~~~g~Dvvid~~g~~----------------~~~~~~~~l~~~G~~v~~G~~~-~~  332 (362)
                      ++|++ ++++.+.+ +.+.+++. .++++|+|||++|++                .++.++++++++|+++.+|... ..
T Consensus       228 ~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~  306 (398)
T 1kol_A          228 AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTED  306 (398)
T ss_dssp             HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCC
T ss_pred             HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCc
Confidence            99997 78887644 66666654 456899999999974                7899999999999999999862 21


Q ss_pred             cCCCCC--CCCChhhHHHHHHhcCeEEEEe
Q 018013          333 QGEHGW--QPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       333 ~~~~~~--~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ......  ....++.....++.|++++.|+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  336 (398)
T 1kol_A          307 PGAVDAAAKIGSLSIRFGLGWAKSHSFHTG  336 (398)
T ss_dssp             TTCSSHHHHTTCCCCCHHHHHHTTCEEEES
T ss_pred             ccccccccccccccccHHHHhhcccEEEec
Confidence            110000  0000111123577899999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=3e-40  Score=342.54  Aligned_cols=221  Identities=24%  Similarity=0.333  Sum_probs=198.8

Q ss_pred             cCceEEEeccCC-CCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCCCCCCCCCCCe
Q 018013          100 RDATIKVRAPLR-LPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTP  178 (362)
Q Consensus       100 ~~~~~~~~~~~p-~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~  178 (362)
                      .+.+++++.+.| .+++++||+|||.++|||++|+++..|.++         .|.++|||++|+|+++|++|++|++|||
T Consensus       221 ~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---------~~~~lG~E~aG~V~~vG~~V~~~~vGDr  291 (795)
T 3slk_A          221 LDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---------GVASLGSEGAGVVVETGPGVTGLAPGDR  291 (795)
T ss_dssp             STTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---------SCCCSCCCEEEEEEEECSSCCSSCTTCE
T ss_pred             ccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---------CCccccceeEEEEEEeCCCCCcCCCCCE
Confidence            356788777643 278999999999999999999999998764         2447999999999999999999999999


Q ss_pred             EEEecCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 018013          179 AAIMTFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN  255 (362)
Q Consensus       179 V~~~~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~  255 (362)
                      |+++.+|+|+||+++|++.++++|++  +.++|+++..++|||++|.+... ++|++|||+|++|++|++++|+||.+|+
T Consensus       292 V~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga  371 (795)
T 3slk_A          292 VMGMIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA  371 (795)
T ss_dssp             EEECCSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC
T ss_pred             EEEEecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999985  67888899999999999988777 9999999999999999999999999999


Q ss_pred             EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCccc
Q 018013          256 TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       256 ~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|+++++++ |.+.++ +|+++++++++.++.+.+++.+ ++|+|+||||+|++.++.++++|+++|+||.+|..+.
T Consensus       372 ~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr~v~iG~~~~  446 (795)
T 3slk_A          372 EVYATASED-KWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDV  446 (795)
T ss_dssp             CEEEECCGG-GGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEEEEECCSTTC
T ss_pred             EEEEEeChH-Hhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCEEEEeccccc
Confidence            999999765 666666 9999999999999888777765 5799999999999999999999999999999998654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.6e-40  Score=318.65  Aligned_cols=261  Identities=18%  Similarity=0.206  Sum_probs=215.0

Q ss_pred             CccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccC-------C---------CC--
Q 018013           84 PESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFS-------D---------GN--  145 (362)
Q Consensus        84 p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~-------~---------~~--  145 (362)
                      +.+||+++.....    ..+++++.+.| +++++||+|||.+++||++|++++.|.++.       .         ..  
T Consensus         5 ~~~mka~v~~~~~----~~l~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~   79 (379)
T 3iup_A            5 ALQLRSRIKSSGE----LELSLDSIDTP-HPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG   79 (379)
T ss_dssp             EEEEEEEECTTSE----EEEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHH
T ss_pred             hhhHHHHHhcCCC----CceEEEeccCC-CCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccc
Confidence            4568988875432    24889999999 899999999999999999999999886320       0         00  


Q ss_pred             -----CCCCCCCCCCCCceEEEEEEeCCCC-CCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHH
Q 018013          146 -----DIGSRLPFDAGFEAVGLIAAVGDSV-NNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLT  217 (362)
Q Consensus       146 -----~~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~t  217 (362)
                           .....+|+++|||++|+|+++|++| ++|++||+|++...|+|+||+++|++.++++|++  +.++++++..++|
T Consensus        80 ~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  159 (379)
T 3iup_A           80 AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLT  159 (379)
T ss_dssp             HHHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHH
T ss_pred             cccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence                 0023578899999999999999999 8999999999999999999999999999999985  5677778899999


Q ss_pred             HHHHHHHhCCCCCCEEEEEc-CCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC-C
Q 018013          218 ASIALEQAGPASGKKVLVTA-AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF-P  295 (362)
Q Consensus       218 A~~al~~~~~~~g~~VlI~g-a~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~-~  295 (362)
                      ||++++... ++|++|||+| |+|++|++++|+|+.+|++|++++++++|.++++++|+++++|++++++.+.+++.+ +
T Consensus       160 a~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t~~  238 (379)
T 3iup_A          160 ALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVS  238 (379)
T ss_dssp             HHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHHHH
T ss_pred             HHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHhcC
Confidence            998887766 8999999996 799999999999999999999999999999999999999999999988887777654 4


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhc-----cC-----------CEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEE
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALA-----VY-----------GRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVV  358 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~-----~~-----------G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~  358 (362)
                      +++|++|||+|+ ..++.++++++     ++           |+++.+|..+.....  +.         .++.|++++.
T Consensus       239 ~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~~~~--~~---------~~~~~~~~i~  307 (379)
T 3iup_A          239 TGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTE--FN---------RNFGMAWGMG  307 (379)
T ss_dssp             HCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEEEEE--EC---------CCSCSCEEEE
T ss_pred             CCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCCccc--cc---------cccccceEEE
Confidence            589999999997 46688888885     44           666666665532211  11         2456888888


Q ss_pred             Eec
Q 018013          359 CIH  361 (362)
Q Consensus       359 G~~  361 (362)
                      |++
T Consensus       308 g~~  310 (379)
T 3iup_A          308 GWL  310 (379)
T ss_dssp             ECC
T ss_pred             EEE
Confidence            863

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=3.5e-38  Score=293.30  Aligned_cols=239  Identities=29%  Similarity=0.398  Sum_probs=199.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++..    ..+++.|.| +++++||+|||.++|||++|++++.|.++.     ...+|.++|||++|+|+  
T Consensus         1 Mka~~~~~~g~~----~~l~~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-----~~~~p~i~G~e~~G~V~--   68 (302)
T 1iz0_A            1 MKAWVLKRLGGP----LELVDLPEP-EAEEGEVVLRVEAVGLNFADHLMRLGAYLT-----RLHPPFIPGMEVVGVVE--   68 (302)
T ss_dssp             CEEEEECSTTSC----EEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSS-----CCCSSBCCCCEEEEEET--
T ss_pred             CeEEEEcCCCCc----hheEECCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCC-----CCCCCCcccceEEEEEE--
Confidence            789999876643    345588888 789999999999999999999999986542     13578999999999997  


Q ss_pred             CCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHH
Q 018013          167 GDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTG  243 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG  243 (362)
                               ||||++.. +|+|+||+++|++.++++|++  +.++|+++.+++|||+++.+...++|++|||+|++|++|
T Consensus        69 ---------GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~G~vG  139 (302)
T 1iz0_A           69 ---------GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALG  139 (302)
T ss_dssp             ---------TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHH
T ss_pred             ---------CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCEEEEECCCcHHH
Confidence                     99999885 499999999999999999985  456778999999999999754478999999999999999


Q ss_pred             HHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCE
Q 018013          244 QFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGR  322 (362)
Q Consensus       244 ~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~  322 (362)
                      ++++|+|+..|++|+++++++++.+.++++|+++++|+++ .++.+.+     +++|++|| +|++.++.++++++++|+
T Consensus       140 ~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~-----~~~d~vid-~g~~~~~~~~~~l~~~G~  213 (302)
T 1iz0_A          140 TAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHGGR  213 (302)
T ss_dssp             HHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT-----TSEEEEEE-CSCTTHHHHHTTEEEEEE
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh-----cCceEEEE-CCHHHHHHHHHhhccCCE
Confidence            9999999999999999999999999999999999999876 5554433     67999999 999899999999999999


Q ss_pred             EEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          323 LIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       323 ~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++.+|........  +.   +    ..++.|++++.|++
T Consensus       214 ~v~~g~~~~~~~~--~~---~----~~~~~~~~~~~g~~  243 (302)
T 1iz0_A          214 LVYIGAAEGEVAP--IP---P----LRLMRRNLAVLGFW  243 (302)
T ss_dssp             EEEC-------CC--CC---T----THHHHTTCEEEECC
T ss_pred             EEEEeCCCCCCCC--cC---H----HHHHhCCCeEEEEe
Confidence            9999987653221  11   1    14778999999974

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=4.4e-37  Score=289.73  Aligned_cols=260  Identities=22%  Similarity=0.298  Sum_probs=212.3

Q ss_pred             CCccceEEEEecc--CCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceE
Q 018013           83 LPESFEKLVVHTL--NHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAV  160 (362)
Q Consensus        83 ~p~~~~a~~~~~~--~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~  160 (362)
                      .+.+||+++++..  +.+..+.+++++.+.| +++++||+|||.++|||+.|..+ .+         ...+|.++|||++
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P-~~~~~eVlVkv~a~gi~~~~~~~-~~---------~~~~p~~~g~e~~   72 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELP-PLKNGEVLLEALFLSVDPYMRIA-SK---------RLKEGAVMMGQQV   72 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEEEECC-CCCTTCEEEEEEEEECCTHHHHH-TT---------TCCTTSBCCCCEE
T ss_pred             ccccccEEEEeecCCCCCCccceEEEeCCCC-CCCCCEEEEEEEEeccCHHHccc-cC---------cCCCCcccccceE
Confidence            3567999999875  3221356889999999 78999999999999999998732 11         2346778999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCC------CHH-HHHhhhhHHHHHHHHHHhCC-CCCCE
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARP------DPE-VVAMLTSGLTASIALEQAGP-ASGKK  232 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~------~~~-~a~l~~~~~tA~~al~~~~~-~~g~~  232 (362)
                      |+|++.  +|++|++||||++.  |+|+||+++|++.++++|++      +.+ +++++.+++|||+++.+... ++|++
T Consensus        73 G~Vv~~--~v~~~~vGdrV~~~--g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~  148 (333)
T 1v3u_A           73 ARVVES--KNSAFPAGSIVLAQ--SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGET  148 (333)
T ss_dssp             EEEEEE--SCTTSCTTCEEEEC--CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCE
T ss_pred             EEEEec--CCCCCCCCCEEEec--CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCE
Confidence            999995  57899999999875  89999999999999999984      234 47889999999999977666 99999


Q ss_pred             EEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChHHHH
Q 018013          233 VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFN  311 (362)
Q Consensus       233 VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~  311 (362)
                      |||+|++|++|++++|+++..|++|+++++++++.+.++++|+++++|+.+ +++.+.+.+..++++|++|||+|+..++
T Consensus       149 vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~  228 (333)
T 1v3u_A          149 VLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLN  228 (333)
T ss_dssp             EEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHHHHH
T ss_pred             EEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChHHHH
Confidence            999999999999999999999999999999999999999999999999987 7888777776666899999999998899


Q ss_pred             HHHHHhccCCEEEEEcCcccccCCC-CCCCCChhhHHHHHHhcCeEEEEec
Q 018013          312 LCLKALAVYGRLIVIGMISQYQGEH-GWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       312 ~~~~~l~~~G~~v~~G~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++++++++|+++.+|..+.+.... +....+    ...++.|++++.|++
T Consensus       229 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~i~g~~  275 (333)
T 1v3u_A          229 TVLSQMKDFGKIAICGAISVYNRMDQLPPGPS----PESIIYKQLRIEGFI  275 (333)
T ss_dssp             HHHTTEEEEEEEEECCCCC-------CCBCCC----HHHHHHTTCEEEECC
T ss_pred             HHHHHHhcCCEEEEEeccccccCCCCCCCCcC----HHHHhhcCceEEEEe
Confidence            9999999999999999876533100 000012    235889999999974

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=3.7e-37  Score=291.54  Aligned_cols=270  Identities=26%  Similarity=0.377  Sum_probs=214.0

Q ss_pred             CCccceEEEEeccCC-CccC-ceEEE--eccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCc
Q 018013           83 LPESFEKLVVHTLNH-NFRD-ATIKV--RAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFE  158 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~-~~~~-~~~~~--~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e  158 (362)
                      ||.+||++++...-. .+.. .++++  +.+.|.+++++||+|||.++|+|+.|. ...|.+....  ....+|+++|||
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~--~~~~~p~v~G~e   77 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPST--AALAQAYTPGQP   77 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC-----------CCCCTTSB
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCc--cccCCCcCCCCe
Confidence            356799999877521 2222 47787  778884489999999999999999885 4445431100  012468899999


Q ss_pred             eEEEEEE--eCCCCCCCCCCCeEEEecCCCeeeEEEeeCCC--eeeCCC---C-CHHHHHhhhhHHHHHHHHHHhCC-CC
Q 018013          159 AVGLIAA--VGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKH--ILPVAR---P-DPEVVAMLTSGLTASIALEQAGP-AS  229 (362)
Q Consensus       159 ~~G~V~~--vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~--~~~ip~---~-~~~~a~l~~~~~tA~~al~~~~~-~~  229 (362)
                      ++|++.+  ||++|++|++||||++.  |+|+||++++++.  ++++|+   + ..++|+++.+++|||+++.+... ++
T Consensus        78 ~~G~~~~GvV~~~v~~~~vGdrV~~~--g~~aey~~v~~~~~~~~~ip~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~  155 (345)
T 2j3h_A           78 IQGYGVSRIIESGHPDYKKGDLLWGI--VAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKE  155 (345)
T ss_dssp             CEEEEEEEEEEECSTTCCTTCEEEEE--EESBSEEEECCCTTTCEEECCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCT
T ss_pred             eecceEEEEEecCCCCCCCCCEEEee--cCceeEEEecccccceeecCCCCCCHHHHHHhccccHHHHHHHHHHHhCCCC
Confidence            9999999  99999999999999875  6899999999876  999985   2 33577888999999999977666 99


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCCh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      |++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+.+ .++.+.++...++++|++|||+|+
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~  235 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGG  235 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCH
Confidence            999999999999999999999999999999999999999998 799999999876 467777776666789999999999


Q ss_pred             HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          308 DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       308 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +.++.++++++++|+++.+|..+.......-...+.    ..++.|++++.|++
T Consensus       236 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~----~~~~~~~~~i~g~~  285 (345)
T 2j3h_A          236 KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNL----SNIIYKRNRIQGFV  285 (345)
T ss_dssp             HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCT----THHHHHTCEEEECC
T ss_pred             HHHHHHHHHHhcCCEEEEEccccccccCCccccccH----HHHhhhceeeceee
Confidence            999999999999999999998775321100000111    14778999999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.4e-38  Score=302.21  Aligned_cols=246  Identities=16%  Similarity=0.220  Sum_probs=204.3

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCC-CeEEEEEeEEeeChhhhhhhcC--CccCCCCCCCCCC---CCCCCCceE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKP-NHVLVKIIFAGVNASDVNFSSG--RYFSDGNDIGSRL---PFDAGFEAV  160 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~-~eV~V~v~~~~i~~~D~~~~~g--~~~~~~~~~~~~~---p~~~G~e~~  160 (362)
                      |||++++.++.    .+++++.+.| ++++ +||+|||.++|||++|++++.|  .++      ...+   |.++|||++
T Consensus         1 MkA~~~~~~g~----~l~~~~~~~P-~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~------~~~~~~~p~v~G~E~~   69 (366)
T 2cdc_A            1 MKAIIVKPPNA----GVQVKDVDEK-KLDSYGKIKIRTIYNGICGADREIVNGKLTLS------TLPKGKDFLVLGHEAI   69 (366)
T ss_dssp             CEEEEECTTSC----CCEEEECCGG-GSCCCSSEEEEEEEEEECHHHHHHHTTCC-------------CCSCEECCSEEE
T ss_pred             CeEEEEeCCCC----ceEEEECcCC-CCCCCCEEEEEEEEEeeccccHHHHcCCCCCC------CCCcCCCCCcCCcceE
Confidence            78999988764    2788999999 7889 9999999999999999999988  543      1245   889999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEEe-------------------------------cCCCeeeEEEeeCCCeeeCCCC-CHHH
Q 018013          161 GLIAAVGDSVNNVKVGTPAAIM-------------------------------TFGSYAEFTMVPSKHILPVARP-DPEV  208 (362)
Q Consensus       161 G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~g~~~~~~~v~~~~~~~ip~~-~~~~  208 (362)
                      |+|++  ++ ++|++||||++.                               ..|+|+||+++|++.++++|++ + +.
T Consensus        70 G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~  145 (366)
T 2cdc_A           70 GVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DI  145 (366)
T ss_dssp             EEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TT
T ss_pred             EEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hh
Confidence            99999  77 899999999963                               3599999999999999999985 4 66


Q ss_pred             HHhhhhHHHHHHHHH-----HhCCC--C-------CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH---hHHHHHH
Q 018013          209 VAMLTSGLTASIALE-----QAGPA--S-------GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE---HKAQLLK  271 (362)
Q Consensus       209 a~l~~~~~tA~~al~-----~~~~~--~-------g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~---~~~~~l~  271 (362)
                      |+++.++.|||+++.     ....+  +       |++|||+|+ |++|++++|+|+..|++|+++++++   ++.+.++
T Consensus       146 Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~  224 (366)
T 2cdc_A          146 GILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE  224 (366)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH
T ss_pred             hhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH
Confidence            788899999999998     33337  8       999999998 9999999999999999999999998   8999999


Q ss_pred             HcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-HHH-HHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHH
Q 018013          272 ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMF-NLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEK  349 (362)
Q Consensus       272 ~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~-~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~  349 (362)
                      ++|++++ | .+ ++.+.+.++ ++++|++||++|+ ..+ +.++++|+++|+++.+|........       ++  ...
T Consensus       225 ~~ga~~v-~-~~-~~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~-------~~--~~~  291 (366)
T 2cdc_A          225 ETKTNYY-N-SS-NGYDKLKDS-VGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVP-------LD--YKT  291 (366)
T ss_dssp             HHTCEEE-E-CT-TCSHHHHHH-HCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEE-------EE--HHH
T ss_pred             HhCCcee-c-hH-HHHHHHHHh-CCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccc-------cC--hhh
Confidence            9999988 8 65 555555443 3789999999997 477 9999999999999999987642111       11  123


Q ss_pred             ---HHhcCeEEEEec
Q 018013          350 ---ILAKSQTVVCIH  361 (362)
Q Consensus       350 ---~~~k~~~i~G~~  361 (362)
                         ++.|++++.|++
T Consensus       292 ~~~~~~~~~~i~g~~  306 (366)
T 2cdc_A          292 LQEIVHTNKTIIGLV  306 (366)
T ss_dssp             HHHHHHTTCEEEECC
T ss_pred             hHHHHhcCcEEEEec
Confidence               789999999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=5.2e-29  Score=283.05  Aligned_cols=242  Identities=21%  Similarity=0.244  Sum_probs=197.0

Q ss_pred             cCceEEEeccCCCCCC--CCeEEEEEeEEeeChhhhhhhcCCccCCC-CCCCCCCCCCCCCceEEEEEEeCCCCCCCCCC
Q 018013          100 RDATIKVRAPLRLPIK--PNHVLVKIIFAGVNASDVNFSSGRYFSDG-NDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVG  176 (362)
Q Consensus       100 ~~~~~~~~~~~p~~~~--~~eV~V~v~~~~i~~~D~~~~~g~~~~~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G  176 (362)
                      .+.+.+.+.+....+.  ++||+|+|.++|+|++|+++..|.++... .......|.++|+|++|+|          ++|
T Consensus      1541 l~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vG 1610 (2512)
T 2vz8_A         1541 LSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASG 1610 (2512)
T ss_dssp             TTSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTS
T ss_pred             cCceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccC
Confidence            3456676665431133  79999999999999999999999765321 0011234678999999987          379


Q ss_pred             CeEEEecC-CCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHH
Q 018013          177 TPAAIMTF-GSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKL  252 (362)
Q Consensus       177 d~V~~~~~-g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~  252 (362)
                      |+|+++.. |+|++|+++|++.++++|++  +.++|+++.+++|||+++.+... ++|++||||||+|++|++++|+|+.
T Consensus      1611 drV~g~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~ 1690 (2512)
T 2vz8_A         1611 RRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALS 1690 (2512)
T ss_dssp             CCEEEECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHH
T ss_pred             CEEEEeecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHH
Confidence            99999864 99999999999999999985  56777888899999999988777 9999999999999999999999999


Q ss_pred             CCCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccCCEEEEEc
Q 018013          253 AGNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       253 ~G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .|++|++++++++|.+++++    +|+++++++++.++.+.+...+ ++|+|+||||++++.++.++++++++|+||.+|
T Consensus      1691 ~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG 1770 (2512)
T 2vz8_A         1691 RGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG 1770 (2512)
T ss_dssp             TTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECC
T ss_pred             cCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEee
Confidence            99999999999999999986    6889999999888877776654 578999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          328 MISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .........      .   ...++.|++++.|+
T Consensus      1771 ~~~~~~~~~------~---~~~~~~~~~~~~g~ 1794 (2512)
T 2vz8_A         1771 KFDLSNNHA------L---GMAVFLKNVTFHGI 1794 (2512)
T ss_dssp             CHHHHTTCE------E---EGGGGGGCCEEEEC
T ss_pred             cccccccCc------c---cccccccCCcEEEe
Confidence            765432210      0   01245677777765

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.84  E-value=3.4e-20  Score=161.13  Aligned_cols=136  Identities=29%  Similarity=0.459  Sum_probs=112.9

Q ss_pred             CCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH
Q 018013          196 KHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE  272 (362)
Q Consensus       196 ~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~  272 (362)
                      +.++++|++  +.++++++.++.|||+++.+... ++|++|+|+|++|++|++++|+++..|++|+++++++++.+.+++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            457889985  56777888999999999987666 999999999999999999999999999999999999999989999


Q ss_pred             cCCcEEEeCCCccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCccc
Q 018013          273 LGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       273 ~g~~~v~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|+++++|+.+.++.+.+.+.. ++++|++|||+|++.++.++++|+++|+++.+|..+.
T Consensus        82 ~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~  141 (198)
T 1pqw_A           82 LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDV  141 (198)
T ss_dssp             TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGG
T ss_pred             cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCC
Confidence            9999999988877766665554 4579999999999999999999999999999998764

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.85  E-value=4.3e-09  Score=99.45  Aligned_cols=97  Identities=15%  Similarity=0.096  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcE--EEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDR--VINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~--v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++++|+|+|+ |++|++++++++.+|++|+++++++++.+.+++++.+.  ++++...++.+.+.     ++|+||||++
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~DvVI~~~~  239 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-----EADLLIGAVL  239 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-----TCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHc-----CCCEEEECCC
Confidence            3489999995 99999999999999999999999999999998776543  44444344443332     6899999998


Q ss_pred             hHH-------HHHHHHHhccCCEEEEEcCccc
Q 018013          307 GDM-------FNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       307 ~~~-------~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ...       .+..++.++++|+++.++...+
T Consensus       240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~g  271 (361)
T 1pjc_A          240 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQG  271 (361)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             cCCCCCCeecCHHHHhhCCCCCEEEEEecCCC
Confidence            532       5678899999999999998654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.71  E-value=1.1e-10  Score=112.00  Aligned_cols=168  Identities=17%  Similarity=0.234  Sum_probs=121.0

Q ss_pred             CCCCceEEEEEEeCCCCCCCCCCCeEEE----------ecCCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHHHH
Q 018013          154 DAGFEAVGLIAAVGDSVNNVKVGTPAAI----------MTFGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIAL  222 (362)
Q Consensus       154 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----------~~~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~al  222 (362)
                      ..|+|.++.|.++|++++++.+|+.++.          ..+|++++|+..+...++++|+. ..+.+....+..++|.++
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~~~~s~a~~av  155 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRISEGAVSIGSAAV  155 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTTCSCCSHHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhcCCCccHHHHHH
Confidence            3789999999999999999999998732          12477888887777777777764 222233334556777776


Q ss_pred             HHhC----CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHH-HHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          223 EQAG----PASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKA-QLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       223 ~~~~----~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~-~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ....    ..+|++|+|+| +|++|.++++.++..|+ +|+++.++.++. +.++++|++ ++++  .++.+.+     .
T Consensus       156 ~~a~~~~~~l~g~~VlIiG-aG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~l~~~l-----~  226 (404)
T 1gpj_A          156 ELAERELGSLHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHL-----A  226 (404)
T ss_dssp             HHHHHHHSCCTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHH-----H
T ss_pred             HHHHHHhccccCCEEEEEC-hHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecH--HhHHHHh-----c
Confidence            5432    36899999999 59999999999999999 999999999886 566788875 3333  2343333     3


Q ss_pred             ceeEEEECCChH-HH--HHHHHH--h--ccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGGD-MF--NLCLKA--L--AVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~~-~~--~~~~~~--l--~~~G~~v~~G~~~  330 (362)
                      ++|+|++|++.. .+  ...++.  +  +++|.++.++...
T Consensus       227 ~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          227 RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            689999999852 11  134554  4  5677777777754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.67  E-value=7.9e-08  Score=91.03  Aligned_cols=97  Identities=15%  Similarity=0.122  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCC-CccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~-~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++++|+|+|+ |++|+.+++.++..|++|+++++++++.+.+++ +|.+...+.. ..++.+.+     .++|+|++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~-----~~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSV-----QHADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHH-----HHCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHH-----hCCCEEEECCC
Confidence            4699999996 999999999999999999999999998888865 7776433332 23344433     26899999998


Q ss_pred             hHH-------HHHHHHHhccCCEEEEEcCccc
Q 018013          307 GDM-------FNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       307 ~~~-------~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ...       .+..++.|+++|++|.++...+
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~g  270 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQG  270 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC----
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCC
Confidence            542       5788899999999999997654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.61  E-value=8e-08  Score=86.93  Aligned_cols=108  Identities=18%  Similarity=0.259  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcE-E--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDR-V--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .|+++||+||++|+|.++++.+...|++|+++++++++.+.+ +++|... .  .|..+ +++.+.+....  -+++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999999999887766 4676542 2  34333 23333333321  1469999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccccCCC
Q 018013          302 YESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++|.           +               ..+.+++.|+++|++|.+++.....+..
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~  168 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP  168 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC
Confidence            999983           1               2345667788999999999988766643

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.57  E-value=1.3e-07  Score=89.97  Aligned_cols=124  Identities=18%  Similarity=0.155  Sum_probs=84.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCC---------------cc----HHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKA---------------ED----IKT  288 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~---------------~~----~~~  288 (362)
                      ++++|+|+| +|.+|++++++++.+|++|+++++++++.+.++++|++.+ ++..+               ++    ..+
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            689999999 6999999999999999999999999999888888998754 23211               00    111


Q ss_pred             HHHHHCCCceeEEEECC---ChH---H-HHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          289 VFKEEFPKGFDIIYESV---GGD---M-FNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~---g~~---~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .+.+.. .++|+||+|+   |..   . ....++.|++++.+|.++...+......... .      .+..+++++.|+.
T Consensus       250 ~l~~~~-~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~-~------~~~~~~v~i~g~~  321 (384)
T 1l7d_A          250 AVLKEL-VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPG-K------IVVKHGVKIVGHT  321 (384)
T ss_dssp             HHHHHH-TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTT-C------EEEETTEEEECCS
T ss_pred             HHHHHh-CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCC-c------EEEECCEEEEEeC
Confidence            122222 3689999999   532   2 3778899999999999997543221110011 1      1456777777753

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.53  E-value=2.5e-07  Score=87.84  Aligned_cols=96  Identities=20%  Similarity=0.094  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcE-EEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDR-VINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~-v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|++|+|+|+ |++|+++++.++.+|++|+++++++++.+.+++ +|.+. +......++.+.+     .++|+|++|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l-----~~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAV-----KRADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHH-----HHCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHH-----cCCCEEEECCC
Confidence            5899999995 999999999999999999999999999888876 77763 3222223343333     25899999987


Q ss_pred             hHH-------HHHHHHHhccCCEEEEEcCcc
Q 018013          307 GDM-------FNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       307 ~~~-------~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ...       .+..++.|+++|++|.+|...
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence            432       578889999999999999643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.48  E-value=7.2e-07  Score=86.99  Aligned_cols=158  Identities=18%  Similarity=0.145  Sum_probs=108.2

Q ss_pred             CCCCCCCceEEEEEEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCCCHHHHHhhhhHHHHHHHHHHhC--CC
Q 018013          151 LPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAG--PA  228 (362)
Q Consensus       151 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~~~~~a~l~~~~~tA~~al~~~~--~~  228 (362)
                      +|..+ .++.|+|++.|.+|.++.     .....|.+...+....+.+.+   ...+  .++....++|+++.+..  ..
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~-----a~~~~Gilv~~~~~vn~sVae---~~~r--~l~~~~~s~~~g~~r~~~~~l  272 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLY-----QFAAAGDLAFPAINVNDSVTK---SKFD--NKYGTRHSLIDGINRGTDALI  272 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHH-----HHHHTTCCCSCEEECTTSHHH---HTTH--HHHHHHHHHHHHHHHHHCCCC
T ss_pred             chhhh-cCeEEEEEEeCCChhHHH-----HHHHcCCEEEecCCccHHHHH---HHHh--hhhhhhhhhhHHHHhccCCCC
Confidence            44445 799999999999887761     001123232222111111111   0001  22334556677765544  37


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      +|++|+|+| .|.+|+.+++.++.+|++|+++++++.+.+.++++|++ +.     ++.+.+     .+.|+|+++++. 
T Consensus       273 ~GktV~IiG-~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~-----~l~e~l-----~~aDvVi~atgt~  340 (494)
T 3ce6_A          273 GGKKVLICG-YGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VV-----TVEEAI-----GDADIVVTATGNK  340 (494)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHG-----GGCSEEEECSSSS
T ss_pred             CcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Ee-----cHHHHH-----hCCCEEEECCCCH
Confidence            899999999 69999999999999999999999999998888889986 22     233322     468999999985 


Q ss_pred             HHHH-HHHHHhccCCEEEEEcCccc
Q 018013          308 DMFN-LCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       308 ~~~~-~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ..+. ..++.|+++|+++.+|....
T Consensus       341 ~~i~~~~l~~mk~ggilvnvG~~~~  365 (494)
T 3ce6_A          341 DIIMLEHIKAMKDHAILGNIGHFDN  365 (494)
T ss_dssp             CSBCHHHHHHSCTTCEEEECSSSGG
T ss_pred             HHHHHHHHHhcCCCcEEEEeCCCCC
Confidence            3344 78899999999999998653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.44  E-value=1e-06  Score=78.55  Aligned_cols=107  Identities=19%  Similarity=0.218  Sum_probs=75.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE---EeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV---INYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      +++|||+||++|+|.+.++.+...|++|+++++++++.+.+.+.+....   .|..+ +++.+.+....  -+++|+++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999999999999999999999999999999988887765554422   23333 23333333221  146999999


Q ss_pred             CCCh-----------H---------------HHHHHHHHh-ccCCEEEEEcCcccccCCC
Q 018013          304 SVGG-----------D---------------MFNLCLKAL-AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       304 ~~g~-----------~---------------~~~~~~~~l-~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|.           +               ..+.+++.| +.+|++|.+++.....+..
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~  141 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP  141 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC
Confidence            9972           1               122344455 4579999999988766543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.43  E-value=1e-06  Score=78.90  Aligned_cols=108  Identities=21%  Similarity=0.191  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEEE---eCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRVI---NYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v~---~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .|++++|+||++|+|.+.++.+...|++|+++++++++.+.+    ++.|.+...   |..+ +++.+.+.+.  .-+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            689999999999999999999999999999999998876554    345654332   3333 2333333332  12469


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHhc---cCCEEEEEcCcccccCCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKALA---VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l~---~~G~~v~~G~~~~~~~~~  336 (362)
                      |+++|++|.           +               ..+.+++.|.   .+|+||.+++.....+..
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~  154 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP  154 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC
Confidence            999999982           1               2235566662   468999999988766543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.42  E-value=1.1e-06  Score=78.51  Aligned_cols=108  Identities=19%  Similarity=0.274  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEE---EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRV---INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +|++++|+||++|+|.+.++.+...|++|+++++++++.+.+    ++.|....   .|..+ +++.+.+++..  -+++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999998877655    34565432   23333 33333333321  1469


Q ss_pred             eEEEECCCh--H-------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          299 DIIYESVGG--D-------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       299 Dvvid~~g~--~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      |+++|++|-  .                         ..+.+++.|.  .+|+||.+++..+..+..
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~  152 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF  152 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC
Confidence            999999872  1                         2235566663  468999999988766543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.39  E-value=9.2e-07  Score=84.51  Aligned_cols=99  Identities=19%  Similarity=0.267  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE-eCC-------------CccH----HHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI-NYK-------------AEDI----KTVF  290 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~-------------~~~~----~~~~  290 (362)
                      ++++|+|+| +|.+|+.++++|+.+|++|++++++.++.+.++++|++.+. +..             +.++    .+.+
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            479999999 69999999999999999999999999999989889986542 211             0111    0012


Q ss_pred             HHHCCCceeEEEECC---Ch---HH-HHHHHHHhccCCEEEEEcCc
Q 018013          291 KEEFPKGFDIIYESV---GG---DM-FNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~---g~---~~-~~~~~~~l~~~G~~v~~G~~  329 (362)
                      .+.. .++|+||+++   |.   .. ....++.|++++.+|.++..
T Consensus       250 ~e~~-~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          250 AAQA-KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHH-HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHh-CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            2211 3689999995   21   22 36789999999999999975

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.37  E-value=8.3e-07  Score=79.46  Aligned_cols=110  Identities=17%  Similarity=0.228  Sum_probs=76.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EEE--eCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RVI--NYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.|++++|+||++++|.++++.+...|++|+++++++++.+.+. +++.. ..+  |..+ +++.+.+....  -+++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            36899999999999999999999999999999999988877664 45543 222  3333 22333322221  146999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccccCCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~  337 (362)
                      +++++|.           +               ..+.+++.++++|+||.+++.....+...
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  148 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG  148 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC
Confidence            9999872           1               12334455667899999999887665433

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.35  E-value=4.7e-07  Score=80.28  Aligned_cols=106  Identities=19%  Similarity=0.252  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCCc-cHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKAE-DIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .|+++||+||++|+|.+.++.+...|++|+++++++++.+....-.+. ...|..++ ++.+.++ .. +++|+++|++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-~~-g~iDiLVNNAG   87 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFE-AL-PRLDVLVNNAG   87 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHH-HC-SCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHH-hc-CCCCEEEECCC
Confidence            699999999999999999999999999999999987765432211111 22344443 3333433 33 46999999998


Q ss_pred             h---------H---------------HHHHHHHHhc-cCCEEEEEcCcccccCCC
Q 018013          307 G---------D---------------MFNLCLKALA-VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       307 ~---------~---------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~  336 (362)
                      -         +               ..+.+++.|+ .+|+||.+++.....+..
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~  142 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA  142 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC
Confidence            2         1               1234556664 579999999988766543

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.26  E-value=4.5e-06  Score=74.08  Aligned_cols=107  Identities=26%  Similarity=0.390  Sum_probs=72.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEE---eCCC-ccHHHHHHHHCCCceeEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVI---NYKA-EDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~---~~~~-~~~~~~~~~~~~~g~Dvvi  302 (362)
                      .++++|||+||+|++|.++++.+...|++|++++++.++.+.+. ++.....+   |..+ +.+.+.+++.  +++|++|
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li   89 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDILV   89 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            68899999999999999999999999999999999988877764 44433222   2222 2222333222  4699999


Q ss_pred             ECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          303 ESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       303 d~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +++|..                          ..+.+++.+  +..|+||.+++...+.+..
T Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  151 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP  151 (249)
T ss_dssp             ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC
Confidence            999821                          112334444  4568999999988766543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.26  E-value=2.2e-06  Score=76.13  Aligned_cols=104  Identities=27%  Similarity=0.331  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH--hHHHHHHHcCCcEE---EeCCCcc-HHHHHHHHCCCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE--HKAQLLKELGVDRV---INYKAED-IKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l~~~g~~~v---~~~~~~~-~~~~~~~~~~~g~Dvvi  302 (362)
                      .|++++|+||++|+|.+.++.+...|++|++++++.  +..+.+++.|....   .|..++. ..+.   ...+++|+++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~---~~~g~iDiLV   84 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDS---FTDAGFDILV   84 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTS---STTTCCCEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHH---HHhCCCCEEE
Confidence            589999999999999999999999999999999874  34555667776532   2333322 1111   1235799999


Q ss_pred             ECCCh-----------H---------------HHHHHHHHh-c--cCCEEEEEcCcccccCC
Q 018013          303 ESVGG-----------D---------------MFNLCLKAL-A--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       303 d~~g~-----------~---------------~~~~~~~~l-~--~~G~~v~~G~~~~~~~~  335 (362)
                      |++|.           +               ..+.+++.| +  .+|+||.+++.....+.
T Consensus        85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~  146 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG  146 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred             ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC
Confidence            99982           1               223455555 2  36999999998876654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.25  E-value=4.7e-06  Score=75.47  Aligned_cols=109  Identities=16%  Similarity=0.199  Sum_probs=75.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE-E--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR-V--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.++++||+||+|++|.++++.+...|++|+++++++++.+.+. +++... .  .|..+ +++.+.+....  -+++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999999988776664 455432 2  23333 22333333221  136999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      +++++|.           +               ..+.+++.+++  +|+||.+++...+.+..
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  168 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA  168 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC
Confidence            9999882           1               12345555654  57999999988766643

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.23  E-value=3.8e-06  Score=74.72  Aligned_cols=108  Identities=24%  Similarity=0.314  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEE---eCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVI---NYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~---~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .|+++||+||++++|.++++.+...|++|++++++.++.+.+. +++....+   |..+ +++.+.+....  -+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5789999999999999999999999999999999988876653 56654322   3333 22333333221  1369999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCCC
Q 018013          302 YESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~  336 (362)
                      ++++|.           +               ..+.+++.|+.   .|+||.+++.....+..
T Consensus        85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  148 (247)
T 3rwb_A           85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP  148 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC
Confidence            999982           1               12234444543   68999999887665543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.22  E-value=3.3e-06  Score=75.61  Aligned_cols=107  Identities=17%  Similarity=0.200  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC-c-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV-D-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~-~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      .|++++|+||+|  |+|.+.++.+...|++|+++.+++++.+.+.    +.+. . +.  .|..+ +++.+.++...  -
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            589999999876  9999999999999999999999887766553    3343 2 22  34333 23333333221  1


Q ss_pred             CceeEEEECCCh----H-----------HH---------------HHHHHHhccCCEEEEEcCcccccCC
Q 018013          296 KGFDIIYESVGG----D-----------MF---------------NLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       296 ~g~Dvvid~~g~----~-----------~~---------------~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +++|++++++|.    .           .+               +.....++++|+||.+++.......
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~  154 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV  154 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc
Confidence            469999999872    0           11               1233456788999999998876554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.22  E-value=5.4e-06  Score=74.18  Aligned_cols=109  Identities=19%  Similarity=0.292  Sum_probs=74.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.++++||+||+|++|.++++.+...|++|++++++.++.+.+. +++.. ..  .|..+ +++.+.+....  -+++|+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35789999999999999999999899999999999988776653 45543 22  23333 22333333221  246999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~  336 (362)
                      +++++|.           +               ..+.+++.+.+   +|+||.+++...+.+..
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  150 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA  150 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC
Confidence            9999882           1               12233444433   68999999988766543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.21  E-value=4.9e-06  Score=74.87  Aligned_cols=108  Identities=18%  Similarity=0.280  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEE---EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRV---INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .++++||+||+||+|.++++.+...|++|++++++.++.+.+.    +.+....   .|..+ +++.+.+....  -+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988766553    3354322   24433 22333333221  1469


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      |++++|+|.           +               ..+.+++.|  +.+|+||.+++........
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~  148 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP  148 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC
Confidence            999999872           1               112344444  3468999999988766543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.19  E-value=6.5e-06  Score=74.69  Aligned_cols=106  Identities=29%  Similarity=0.400  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HH----HHHHcCCcE-EE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQ----LLKELGVDR-VI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~----~l~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|++++++.++ .+    .+++.|... .+  |..+ +++.+.+....  -++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887543 22    234445442 22  3333 22333332221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +|++++++|.           +               ..+.+++.|+.+|+||.+++......
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  170 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK  170 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC
Confidence            9999999872           1               22455666667899999998776544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.19  E-value=7.5e-06  Score=72.98  Aligned_cols=109  Identities=21%  Similarity=0.219  Sum_probs=73.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----c-C--Cc-EEEeC--CC-ccHHHHHHHH--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----L-G--VD-RVINY--KA-EDIKTVFKEE--F  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~-g--~~-~v~~~--~~-~~~~~~~~~~--~  294 (362)
                      -.+++++|+||++++|.++++.+...|++|+++++++++.+.+.+    . +  +. ...|.  .+ +++.+.+...  .
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            357899999999999999999998999999999999887665532    1 2  22 22344  22 2233333322  1


Q ss_pred             CCceeEEEECCCh--H-------------------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          295 PKGFDIIYESVGG--D-------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       295 ~~g~Dvvid~~g~--~-------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      .+++|++++++|.  .                         ..+.+++.|  +.+|+||.+++.....+..
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  160 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA  160 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC
Confidence            2469999999872  0                         123445555  3468999999988766543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.19  E-value=5e-06  Score=75.35  Aligned_cols=109  Identities=16%  Similarity=0.176  Sum_probs=75.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCCc-cHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKAE-DIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~~-~~~~~~~~~~--~~g~Dv  300 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+. +++.. ..  .|..+. ++.+.+....  -+++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36789999999999999999999899999999999988776654 45543 22  244442 2333333221  146999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +++++|.           +               ..+.+++.+  +.+|+||.+++.....+..
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~  170 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG  170 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC
Confidence            9999883           1               123444545  4568999999988766543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.19  E-value=7.3e-06  Score=73.11  Aligned_cols=107  Identities=15%  Similarity=0.152  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC-CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF-PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~-~~g~D  299 (362)
                      .++++||+||++++|.++++.+...|++|++++++.++.+.+.    +.|.. ..  .|..+ +++.+.+.... .+++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            5789999999999999999999999999999999888765543    33543 22  23333 22333222211 15799


Q ss_pred             EEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          300 IIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++++++|.           +               ..+.+++.|+  .+|+||.+++.....+.
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  149 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG  149 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC
Confidence            99999982           0               1233444453  35899999988776554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.17  E-value=4.2e-06  Score=75.11  Aligned_cols=108  Identities=16%  Similarity=0.198  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH-HHHHHcCCcEE-EeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA-QLLKELGVDRV-INYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~-~~l~~~g~~~v-~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++. +.+++.++..+ .|..+ +++.+.+....  -+++|++++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            578999999999999999999989999999999987653 44455665422 34444 22333333221  246999999


Q ss_pred             CCCh----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          304 SVGG----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       304 ~~g~----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      ++|.          +               ..+.+++.|+.  .|+||.+++.....+..
T Consensus       106 nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  165 (260)
T 3gem_A          106 NASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS  165 (260)
T ss_dssp             CCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS
T ss_pred             CCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC
Confidence            9882          1               12234444543  48999999987766543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.17  E-value=5.2e-06  Score=75.00  Aligned_cols=109  Identities=20%  Similarity=0.272  Sum_probs=74.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EEE--eCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RVI--NYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      ..++++||+||++++|.++++.+...|++|++++++.++.+.+. +++.. ..+  |..+ +++.+.+....  -+++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46789999999999999999999999999999999988876664 45432 222  4333 22333333221  146999


Q ss_pred             EEECCChH---------------------------HHHHHHHHhcc----CCEEEEEcCcccccCCC
Q 018013          301 IYESVGGD---------------------------MFNLCLKALAV----YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~~---------------------------~~~~~~~~l~~----~G~~v~~G~~~~~~~~~  336 (362)
                      +++++|..                           ..+.+++.+.+    +|+||.+++.....+..
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~  172 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP  172 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC
Confidence            99998720                           12345555543    58999999988766543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.17  E-value=8e-06  Score=73.31  Aligned_cols=109  Identities=10%  Similarity=0.149  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.++++||+||++++|.++++.+...|++|++++++.++.+.+.    +.+.. ..  .|..+ +++.+.+....  -++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999999999999988766553    33443 22  24443 22333333221  246


Q ss_pred             eeEEEECCCh------------H---------------HHHHHHHHhc-cCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG------------D---------------MFNLCLKALA-VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~------------~---------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|.            +               ..+.+++.+. .+|+||.+++........
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  155 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA  155 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC
Confidence            9999999863            1               1122333333 479999999988766543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.16  E-value=3.9e-06  Score=75.57  Aligned_cols=109  Identities=16%  Similarity=0.136  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      -.++++||+||+|++|.++++.+...|++|++++++.++.+.+...... ...|..+ +++.+.+....  -+++|++++
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            3578999999999999999999999999999999988766544322221 1234433 23333333221  146999999


Q ss_pred             CCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          304 SVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       304 ~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|.           +               ..+.+++.++  ..|+||.+++...+....
T Consensus        94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~  154 (266)
T 3p19_A           94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP  154 (266)
T ss_dssp             CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC
Confidence            9882           1               1123444443  469999999988766543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.16  E-value=6.6e-06  Score=73.96  Aligned_cols=109  Identities=19%  Similarity=0.264  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----H-cCCcE-E--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----E-LGVDR-V--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~-~g~~~-v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+.    + .+... .  .|..+ +++.+.++...  -+
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999988766542    2 35432 2  34444 33333333321  14


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++++++|.           +               ..+.+++.+..   +|+||.+++...+.+..
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP  166 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC
Confidence            69999999872           1               12234444443   68999999988766543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.16  E-value=3.8e-06  Score=75.34  Aligned_cols=107  Identities=17%  Similarity=0.213  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH---HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL---KELGVD-RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l---~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++.+.+   .+.+.. ..  .|..+ +++.+.+.+..  -+++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999876654433   344543 22  34443 23333333321  14699


Q ss_pred             EEEECCCh----------H---------------HHHHHHHHhc-cCCEEEEEcCcccccCC
Q 018013          300 IIYESVGG----------D---------------MFNLCLKALA-VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~----------~---------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~  335 (362)
                      +++|++|-          +               ..+.+++.|+ .+|+||.+++.....+.
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~  147 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ  147 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC
Confidence            99999982          1               2234555664 47999999998876554

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.15  E-value=3.7e-06  Score=76.40  Aligned_cols=109  Identities=21%  Similarity=0.266  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc----CCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL----GVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~----g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|+++||+||+|++|.++++.+...|++|+++++++++.+.+. ++    +.. ..  .|..+ +++.+.+....  -+
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999899999999999988766553 22    222 22  34444 22333333221  14


Q ss_pred             ceeEEEECCCh--H-------------------------HHHHHHHHhcc----CCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGG--D-------------------------MFNLCLKALAV----YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~--~-------------------------~~~~~~~~l~~----~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++++|+|.  .                         ..+.+++.+.+    +|+||.+++.....+..
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~  181 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP  181 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC
Confidence            69999999872  0                         12344555543    58999999988766543

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.15  E-value=8.6e-06  Score=73.36  Aligned_cols=103  Identities=23%  Similarity=0.332  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++ .++.+.+    ++.+... .+  |..+ +++.+.++...  -+
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999997654 4443333    3455542 22  3333 22333333221  13


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ++|++++++|.           +               ..+.+++.++++|+||.+++..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            69999999882           0               2345667788899999999876

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.15  E-value=3.3e-06  Score=75.12  Aligned_cols=109  Identities=29%  Similarity=0.413  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc---EEEeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD---RVINYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~---~v~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.|+++||+||++++|.++++.+...|++|+++++++++.+.+. +++..   ...|..+ +++.+.++...  -+++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36899999999999999999999999999999999988877664 33332   2234444 23333333221  146999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +++++|.           +               ..+.+++.+  +..|+||.+++.....+..
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  150 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA  150 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC
Confidence            9999882           1               122344444  3468999999877655543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.15  E-value=5.5e-06  Score=74.56  Aligned_cols=108  Identities=29%  Similarity=0.398  Sum_probs=71.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcE-EE--eCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDR-VI--NYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.|+++||+||+|++|.++++.+...|++|++++++.++.+.+ ++++... .+  |..+ +++.+.+....  -+++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999999999999999999998887665 3566542 22  3333 22333333221  146999


Q ss_pred             EEECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          301 IYESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      +++++|..                          ..+.+++.+  +..|+||.+++.....+.
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~  167 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN  167 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC
Confidence            99999821                          123344444  346899999987765553

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.14  E-value=2e-05  Score=69.48  Aligned_cols=107  Identities=19%  Similarity=0.185  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeCCCccHHHHHHHHCC-CceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFP-KGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~~~~~~~~~~~~-~g~Dvvid~~g  306 (362)
                      ++++++|+||+|++|.++++.+...|++|++++++.++.+.+. ++....++..+-.+..+..+.... +++|++|+++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5789999999999999999999999999999999988776654 332223332222222222111212 46999999987


Q ss_pred             h-----------HH---------------HHHHHHHhc--c-CCEEEEEcCcccccCC
Q 018013          307 G-----------DM---------------FNLCLKALA--V-YGRLIVIGMISQYQGE  335 (362)
Q Consensus       307 ~-----------~~---------------~~~~~~~l~--~-~G~~v~~G~~~~~~~~  335 (362)
                      .           +.               .+.+++.+.  . .|+||.+++...+...
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  143 (244)
T 3d3w_A           86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV  143 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred             cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC
Confidence            2           11               223344443  2 5899999988776553

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.14  E-value=8.7e-06  Score=71.87  Aligned_cols=103  Identities=18%  Similarity=0.339  Sum_probs=71.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcE-EEeCCCccHHHHHHHHC--CCceeEEEECCC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDR-VINYKAEDIKTVFKEEF--PKGFDIIYESVG  306 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~-v~~~~~~~~~~~~~~~~--~~g~Dvvid~~g  306 (362)
                      +++++|+||+|++|.++++.+...|++|+++++++++  ..+++++.. ..|..++++.+.+....  -+++|++++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag   79 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAA   79 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            5789999999999999999999999999999998766  334456432 23444445544443321  146999999987


Q ss_pred             h-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          307 G-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       307 ~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      .           +               ..+.+++.|+  ..|+||.+++...+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  135 (239)
T 2ekp_A           80 VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTA  135 (239)
T ss_dssp             CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccC
Confidence            2           0               1234444443  3589999998877654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.14  E-value=5.3e-06  Score=75.69  Aligned_cols=107  Identities=21%  Similarity=0.301  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .|+++||+||+|++|.++++.+...|++|++++++.++ .+.+    ++.+... .+  |..+ +++.+.+.+..  -++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999987553 2222    3345442 22  3333 22333333221  146


Q ss_pred             eeEEEECCCh----H-----------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG----D-----------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~----~-----------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|.    .                       ..+.+++.++++|+||.+++...+...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  190 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN  190 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC
Confidence            9999999762    0                       223455566778999999988776554

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.14  E-value=6.6e-06  Score=74.22  Aligned_cols=109  Identities=17%  Similarity=0.197  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-E--EEeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-R--VINYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~--v~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.+++++|+||++++|.++++.+...|++|+++++++++.+.+. +++.. .  ..|..+ +++.+.+....  -+++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35789999999999999999999999999999999888766653 45543 2  234443 22333333221  136999


Q ss_pred             EEECCChH----------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          301 IYESVGGD----------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~~----------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      +++++|..                            ..+.+++.|.  .+|+||.+++...+....
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  154 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD  154 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC
Confidence            99998721                            1223444443  468999999988766543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.14  E-value=1.2e-05  Score=71.96  Aligned_cols=108  Identities=19%  Similarity=0.211  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .++++||+||++++|.++++.+...|++|+++++++++.+.+. +   .+.. ..  .|..+ +++.+.+....  -+++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999988877664 2   2332 22  23333 23333333221  1469


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHh-c--cCCEEEEEcCcccccCCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKAL-A--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l-~--~~G~~v~~G~~~~~~~~~  336 (362)
                      |++++|+|.           +               ..+.+++.+ +  ..|+||.+++........
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  151 (257)
T 3imf_A           85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP  151 (257)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC
Confidence            999999982           1               122334444 2  369999999887766543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.14  E-value=9.5e-06  Score=74.36  Aligned_cols=109  Identities=17%  Similarity=0.238  Sum_probs=74.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.|+++||+||+|++|.++++.+...|++|++++++.++.+.+.    +.+.. ..  .|..+ +++.+.+....  -++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999988776553    23443 22  34333 22333333221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~  336 (362)
                      +|++|+++|.           +               ..+.+++.+..   +|+||.+++...+.+..
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  176 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA  176 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC
Confidence            9999999882           1               12234444433   68999999988766543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.14  E-value=8.5e-06  Score=72.95  Aligned_cols=108  Identities=20%  Similarity=0.232  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHHH----HcCCcE-EE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLLK----ELGVDR-VI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l~----~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|+++ .++.++.+.+.    +.+... .+  |..+ +++.+.++...  -++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 78777665543    335432 22  3333 22333333221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|.           +               ..+.+++.|++  +|+||.+++........
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~  149 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE  149 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC
Confidence            9999999972           1               12344555544  57999999988766543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.14  E-value=1.1e-05  Score=73.10  Aligned_cols=108  Identities=19%  Similarity=0.233  Sum_probs=74.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE-E--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR-V--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .|+++||+||++++|.++++.+...|++|++++++.++.+.+. +++... .  .|..+ +++.+.+....  -+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5789999999999999999999999999999999988877764 454432 2  23333 22333333221  1469999


Q ss_pred             EECCCh------------H-------------------HHHHHHHHh-ccCCEEEEEcCcccccCCC
Q 018013          302 YESVGG------------D-------------------MFNLCLKAL-AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~------------~-------------------~~~~~~~~l-~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++++|.            +                   ..+.+++.+ +.+|++|.+++.....+..
T Consensus        84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  150 (281)
T 3zv4_A           84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG  150 (281)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS
T ss_pred             EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC
Confidence            999872            0                   122334444 4579999999988766543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.14  E-value=1.1e-05  Score=73.55  Aligned_cols=108  Identities=21%  Similarity=0.248  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH--hHHHHH----HHcCCcEEE---eCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE--HKAQLL----KELGVDRVI---NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l----~~~g~~~v~---~~~~-~~~~~~~~~~~--~~  296 (362)
                      .|+++||+||++++|.++++.+...|++|++++++.  ++.+.+    ++.|....+   |..+ +++.+.+....  -+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999998862  233332    345554332   3333 22333332221  14


Q ss_pred             ceeEEEECCCh----H-----------------------HHHHHHHHhccCCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGG----D-----------------------MFNLCLKALAVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~----~-----------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++++++|.    .                       ..+.+++.++++|+||.+++...+....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~  194 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP  194 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC
Confidence            69999999872    0                       1234455677789999999988876643

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.13  E-value=1.7e-05  Score=70.10  Aligned_cols=103  Identities=15%  Similarity=0.102  Sum_probs=74.4

Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCC-c--EEEeCCCccHHHH
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGV-D--RVINYKAEDIKTV  289 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~-~--~v~~~~~~~~~~~  289 (362)
                      .+.+.+.....+++++||..| +| .|..+..+++. +.+|++++.+++..+.+++    .+. +  .++..+-.+   .
T Consensus        79 ~~~~~~~~~~~~~~~~vldiG-~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~  152 (248)
T 2yvl_A           79 DSFYIALKLNLNKEKRVLEFG-TG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD---A  152 (248)
T ss_dssp             HHHHHHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT---S
T ss_pred             hHHHHHHhcCCCCCCEEEEeC-CC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh---c
Confidence            333555555558999999999 45 68888899988 8899999999998887764    343 1  222211111   0


Q ss_pred             HHHH-CCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcC
Q 018013          290 FKEE-FPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       290 ~~~~-~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~  328 (362)
                         . .+.++|+|+.+.+.  ..++.+.+.|+++|+++..-.
T Consensus       153 ---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          153 ---EVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             ---CCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             ---ccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence               1 23579999998773  688999999999999998755

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.13  E-value=8.3e-06  Score=72.89  Aligned_cols=109  Identities=19%  Similarity=0.221  Sum_probs=73.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+.    +.+.. ..+  |..+ +++.+.+....  -++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999888888999999999988766543    34543 222  3333 22333333221  146


Q ss_pred             eeEEEECCCh----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|.          +               ..+.+++.|++  +|+||.+++...+.+..
T Consensus        90 id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  155 (256)
T 3gaf_A           90 ITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV  155 (256)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC
Confidence            9999999872          1               12334444533  68999999988766643

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.13  E-value=1.9e-05  Score=70.77  Aligned_cols=109  Identities=19%  Similarity=0.232  Sum_probs=73.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.++++||+||+|++|.++++.+...|++|++++++.++.+.+.    +.+.. .+  .|..+ +++.+.+....  -+.
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999988889999999999988766553    33443 22  23333 22333332221  136


Q ss_pred             eeEEEECCCh------------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG------------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~------------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++|+++|.            +               ..+.++..+  +..|+||.+++...+.+..
T Consensus       107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  174 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA  174 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC
Confidence            9999999873            0               122334444  3569999999988766543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.13  E-value=7.9e-06  Score=72.07  Aligned_cols=107  Identities=17%  Similarity=0.145  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .++++||+||++++|.++++.+...|++|++++++.++.+.+. +++.. ..  .|..+ +++.+.+....  .+++|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            3679999999999999999998899999999999988877664 33322 12  33333 23333333221  1469999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHhc-cCCEEEEEcCcccccCC
Q 018013          302 YESVGG-----------D---------------MFNLCLKALA-VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~  335 (362)
                      ++++|.           +               ..+.+++.++ .+|+||.+++.....+.
T Consensus        82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~  142 (235)
T 3l6e_A           82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK  142 (235)
T ss_dssp             EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC
T ss_pred             EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC
Confidence            999883           0               1234455554 45699999987776554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.13  E-value=1.5e-05  Score=70.70  Aligned_cols=107  Identities=21%  Similarity=0.310  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+.    +.|.. ..  .|..+ +++.+.+....  -+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999987766543    23543 22  23333 22333333221  1469


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHh-ccCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKAL-AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l-~~~G~~v~~G~~~~~~~~  335 (362)
                      |++++++|.           +               ..+.+++.+ +.+|+||.+++.....+.
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  149 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNV  149 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCC
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCC
Confidence            999999872           0               122344444 345999999998776543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.12  E-value=1.1e-05  Score=71.59  Aligned_cols=108  Identities=19%  Similarity=0.068  Sum_probs=71.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-c--CCHhHHHHHH-Hc-CCcEEEeCCC-ccHHHHHHHHCCCceeEEEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-C--GGEHKAQLLK-EL-GVDRVINYKA-EDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~--~~~~~~~~l~-~~-g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid  303 (362)
                      +++++|+||+|++|.++++.+...|++|+++ +  +++++.+.+. ++ +.+ +.+..+ ..+.+.+.+.. +++|++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            4789999999999999999999999999999 6  8888776654 44 332 333322 22333332222 46999999


Q ss_pred             CCCh--------------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCCCCC
Q 018013          304 SVGG--------------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEHGWQ  339 (362)
Q Consensus       304 ~~g~--------------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~~~~  339 (362)
                      ++|.              +               ..+.+++.|.+  .|+||.+++.....+...+.
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  145 (244)
T 1zmo_A           79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNP  145 (244)
T ss_dssp             CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCT
T ss_pred             CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCch
Confidence            9872              1               11234444533  58999999987766544333

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.11  E-value=1.4e-05  Score=71.15  Aligned_cols=107  Identities=23%  Similarity=0.255  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE-EE--eCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR-VI--NYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. +++... .+  |..+ +++.+.++...  -+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999889999999999988776653 455432 22  3333 22333333221  1469999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHhcc-CCEEEEEcCcccccCC
Q 018013          302 YESVGG-----------D---------------MFNLCLKALAV-YGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l~~-~G~~v~~G~~~~~~~~  335 (362)
                      ++++|.           +               ..+.+++.++. +|+||.+++...+.+.
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  145 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI  145 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCC
Confidence            999872           1               12244455543 4899999998876553

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.11  E-value=1.2e-05  Score=72.57  Aligned_cols=109  Identities=18%  Similarity=0.275  Sum_probs=73.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEEE---eCCC-ccHHHHHHHH--CCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRVI---NYKA-EDIKTVFKEE--FPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v~---~~~~-~~~~~~~~~~--~~~g  297 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+.    +.|....+   |..+ +++.+.+...  ..++
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            46899999999999999999999999999999999988765542    34544322   3333 2233333322  1246


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|.           +               ..+.+++.+.  ..|+||.+++.....+..
T Consensus       104 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~  170 (271)
T 4ibo_A          104 VDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA  170 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT
T ss_pred             CCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC
Confidence            9999999882           1               1223444453  358999999987765543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.11  E-value=1.2e-05  Score=72.78  Aligned_cols=111  Identities=15%  Similarity=0.195  Sum_probs=74.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCC---c-EE--EeCCC-ccHHHHHHHHC--
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGV---D-RV--INYKA-EDIKTVFKEEF--  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~---~-~v--~~~~~-~~~~~~~~~~~--  294 (362)
                      -.++++||+||+|++|.++++.+...|++|+++++++++.+.+    ++.+.   . ..  .|..+ +++.+.+....  
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999998776554    23343   2 12  23333 22333333221  


Q ss_pred             CCceeEEEECCCh------------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCC
Q 018013          295 PKGFDIIYESVGG------------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       295 ~~g~Dvvid~~g~------------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~  338 (362)
                      -+++|++++++|.            +               ..+.+++.+.  .+|+||.+++...+......
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  161 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF  161 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC
Confidence            1469999999883            0               1233445553  45799999998876654333

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.11  E-value=6.9e-06  Score=73.28  Aligned_cols=103  Identities=14%  Similarity=0.069  Sum_probs=69.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH---HcCCc-EEEeCCCccHHHHHHHHC--CCceeEEEEC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK---ELGVD-RVINYKAEDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~---~~g~~-~v~~~~~~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      +++||+||+|++|.++++.+...|++|+++++++++.+.+.   +.+.+ ..+  +.+++.+.+....  -+++|+++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            47999999999999999999999999999999877655543   33543 223  3344444333321  1469999999


Q ss_pred             CChH---------------------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          305 VGGD---------------------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       305 ~g~~---------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|..                           ..+.+++.++  ..|+||.+++...+...
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  139 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW  139 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC
Confidence            8721                           1223444443  35899999998776553

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.11  E-value=1.2e-05  Score=71.80  Aligned_cols=107  Identities=25%  Similarity=0.261  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+. +++.. ..  .|..+ +++.+.++...  -+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999988776654 44433 22  24333 23333333221  1369999


Q ss_pred             EECCCh-----------HH---------------HHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          302 YESVGG-----------DM---------------FNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      |+++|.           +.               .+.+++.+++  .|+||.+++...+.+.
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  145 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL  145 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC
Confidence            999872           11               1244555543  5899999998776543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.10  E-value=1.1e-05  Score=74.66  Aligned_cols=108  Identities=16%  Similarity=0.145  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC--c-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV--D-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~--~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .+++|||+||+|++|.++++.+...|++|++++++.++.+.+.    ..+.  . .+  .|..+ +++.+.+....  -+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999899999999999988776553    2333  2 22  34443 23333333321  24


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--------cCCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--------VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--------~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++|+++|.           +               .++.+++.+.        .+|+||.+++.....+..
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence            69999999982           1               1233444443        379999999988766643

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.10  E-value=1.5e-05  Score=72.12  Aligned_cols=109  Identities=17%  Similarity=0.240  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC------------HhHHHH----HHHcCCcE-E--EeCCC-ccHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG------------EHKAQL----LKELGVDR-V--INYKA-EDIK  287 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~------------~~~~~~----l~~~g~~~-v--~~~~~-~~~~  287 (362)
                      -.++++||+||++++|.++++.+...|++|++++++            .++.+.    +++.+... .  .|..+ +++.
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            367999999999999999999999999999999986            333333    23445442 2  23333 2233


Q ss_pred             HHHHHHC--CCceeEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          288 TVFKEEF--PKGFDIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       288 ~~~~~~~--~~g~Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +.++...  -+++|++++++|.           +               ..+.+++.|  +..|+||.+++...+....
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF  166 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence            3333221  1369999999882           1               122334434  3468999999988766543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.10  E-value=1.1e-05  Score=71.82  Aligned_cols=107  Identities=17%  Similarity=0.235  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHH-HHHHcCCcE-E--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQ-LLKELGVDR-V--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~-~l~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++ ++.+ .+++.+... .  .|..+ +++.+.++...  -+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999987 5544 345555432 2  23333 22333333221  146999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      +|+++|.           +               ..+.+++.+++  .|+||.+++...+.+.
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  148 (249)
T 2ew8_A           86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI  148 (249)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC
Confidence            9999872           1               12334444533  5899999998776553

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.10  E-value=2.4e-05  Score=70.52  Aligned_cols=108  Identities=18%  Similarity=0.254  Sum_probs=72.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHH---HHCCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFK---EEFPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~---~~~~~  296 (362)
                      -.+++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+... .  .|..+ +++.+.+.   +..++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999987765442    235432 2  23333 22333332   22325


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++++++|.           +               ..+.+++.|+  ..|+||.+++...+...
T Consensus        99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  165 (273)
T 1ae1_A           99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL  165 (273)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC
Confidence            79999999872           1               1223334443  35899999998876553

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.09  E-value=3.1e-06  Score=73.93  Aligned_cols=92  Identities=11%  Similarity=0.088  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .++++||+||++++|.++++.+...|++|++++++.+             .|..+ +++.+.+++.  +++|++++++|.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~--g~id~lv~nAg~   69 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------LDISDEKSVYHYFETI--GAFDHLIVTAGS   69 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------CCTTCHHHHHHHHHHH--CSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------cCCCCHHHHHHHHHHh--CCCCEEEECCCC
Confidence            5789999999999999999999889999999998654             23333 2334444433  469999999882


Q ss_pred             H---------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          308 D---------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       308 ~---------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      .                           ..+.+++.++++|+||.+++...+...
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  124 (223)
T 3uce_A           70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV  124 (223)
T ss_dssp             CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC
T ss_pred             CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC
Confidence            1                           122344556678999999988776654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.09  E-value=6.5e-06  Score=74.26  Aligned_cols=108  Identities=20%  Similarity=0.326  Sum_probs=73.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-E--EEeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-R--VINYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~--v~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.++++||+||++++|.++++.+...|++|+++++++++.+.+.    +.+.. .  ..|..+ +++.+.+.+..  -++
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999899999999999988766542    33432 2  234444 22333333221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|.           +               ..+.+++.+  +.+|+||.+++.....+.
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN  171 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC
Confidence            9999999872           1               122344444  357899999997766554

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.09  E-value=2.8e-05  Score=70.32  Aligned_cols=78  Identities=21%  Similarity=0.241  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC-CCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF-PKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~-~~g~Dvv  301 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+. +++.. .+  .|..+ +++.+.++... -+++|++
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            36789999999999999999998889999999999988877664 55543 22  23333 33444444442 2479999


Q ss_pred             EECC
Q 018013          302 YESV  305 (362)
Q Consensus       302 id~~  305 (362)
                      +++.
T Consensus       108 v~~a  111 (281)
T 3ppi_A          108 VVAH  111 (281)
T ss_dssp             EECC
T ss_pred             EEcc
Confidence            9983

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.09  E-value=1e-05  Score=72.66  Aligned_cols=107  Identities=20%  Similarity=0.241  Sum_probs=72.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcC--Cc-EEE--eCCCcc-HHHHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELG--VD-RVI--NYKAED-IKTVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g--~~-~v~--~~~~~~-~~~~~~~~~~~g  297 (362)
                      -.++++||+||++++|.++++.+...|++|+++++++++.+.+.    +.+  .. ..+  |..+.+ +.+.++ .. ++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~-g~   85 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE-KY-PK   85 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH-HC-CC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH-hc-CC
Confidence            35789999999999999999999899999999999987765442    222  22 122  333322 233332 22 46


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|.           +.               .+.+++.+  +..|+||.+++...+.+..
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  152 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ  152 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC
Confidence            9999999882           11               23345555  3458999999988766543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.09  E-value=1.8e-05  Score=70.79  Aligned_cols=107  Identities=20%  Similarity=0.218  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc----CCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL----GVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~----g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+. ++    +.. ..  .|..+ +++.+.+....  -++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999989999999999887765542 22    543 22  24333 22333333221  136


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|.           +               ..+.+++.+.  ..|+||.+++...+.+.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  151 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL  151 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC
Confidence            9999999872           1               1223444443  35899999998876553

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.09  E-value=1.4e-05  Score=72.52  Aligned_cols=105  Identities=22%  Similarity=0.278  Sum_probs=70.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc---CCcEE-E--eCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL---GVDRV-I--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~---g~~~v-~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+. ++   +.... +  |..+ +++.+.+....  -++
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988776654 22   33322 2  3333 22333332221  136


Q ss_pred             eeEEEECCCh------------H---------------HHHHHHHHhcc--CCEEEEEcCcccc
Q 018013          298 FDIIYESVGG------------D---------------MFNLCLKALAV--YGRLIVIGMISQY  332 (362)
Q Consensus       298 ~Dvvid~~g~------------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~  332 (362)
                      +|++++++|.            +               ..+.+++.+.+  +|+||.+++...+
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  149 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH  149 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTT
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhC
Confidence            9999999872            1               12234444543  6899999987765

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.09  E-value=1.8e-05  Score=71.38  Aligned_cols=105  Identities=27%  Similarity=0.353  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++ .++.+.+    ++.|... .+  |..+ +++.+.+.+..  -+
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999998554 3444433    3345542 22  3333 22333333221  13


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      ++|++++++|.           +               ..+.+++.++++|+||.+++....
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~  170 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE  170 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGT
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhc
Confidence            69999999872           0               234556677789999999886543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.09  E-value=2.1e-05  Score=70.78  Aligned_cols=107  Identities=21%  Similarity=0.241  Sum_probs=71.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-----HcCCcE-E--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-----ELGVDR-V--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-----~~g~~~-v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.++++||+||+|++|.++++.+...|++|++++++.++.+.+.     +.+... .  .|..+ +++.+.+....  -+
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999887765442     235432 2  24333 22333333221  14


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcc-cccC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMIS-QYQG  334 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~-~~~~  334 (362)
                      ++|++|+++|.           +               ..+.+++.|+.  .|+||.+++.. ...+
T Consensus        99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  165 (267)
T 1vl8_A           99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT  165 (267)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC
Confidence            69999999872           1               11233445543  58999999877 5433

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.08  E-value=3e-05  Score=68.99  Aligned_cols=107  Identities=14%  Similarity=0.173  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----c--C-C-cEE--EeCCC-ccHHHHHHHHC--
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----L--G-V-DRV--INYKA-EDIKTVFKEEF--  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~--g-~-~~v--~~~~~-~~~~~~~~~~~--  294 (362)
                      ..++++||+||++++|.++++.+...|++|++++++.++.+.+.+    .  + . ..+  .|..+ +++.+.+....  
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            457899999999999999998888889999999999887766532    1  2 2 222  34433 22333333221  


Q ss_pred             CCceeEEEECCCh----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccC
Q 018013          295 PKGFDIIYESVGG----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       295 ~~g~Dvvid~~g~----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~  334 (362)
                      -+++|++++++|.          +               ..+.+++.|  +..|+||.+++.....+
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  151 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG  151 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC
Confidence            1469999999983          1               122344444  34689999999877654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.08  E-value=1.9e-05  Score=70.82  Aligned_cols=107  Identities=12%  Similarity=0.143  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---c--CCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---L--GVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~--g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. +   .  +.. ..  .|..+ +++.+.+....  -+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999998889999999999887765543 2   2  443 22  24333 23333333221  14


Q ss_pred             ceeEEEECCCh------------HH---------------HHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG------------DM---------------FNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~------------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|+++|.            +.               .+.+++.++  ..|+||.+++.......
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI  159 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC
Confidence            69999999872            11               123445553  35999999998776543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.08  E-value=1.4e-05  Score=71.48  Aligned_cols=107  Identities=17%  Similarity=0.193  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .++++||+||++++|.++++.+...|++|+++++++++.+.+. +++.. ..  .|..+ +++.+.+....  -+++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5789999999999999999999999999999999998877764 45543 22  23333 22333333221  1369999


Q ss_pred             EECCCh------------H---------------HHHHHHHHhcc------CCEEEEEcCcccccCC
Q 018013          302 YESVGG------------D---------------MFNLCLKALAV------YGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~------------~---------------~~~~~~~~l~~------~G~~v~~G~~~~~~~~  335 (362)
                      ++++|.            +               ..+.+++.+.+      .|+||.+++.....+.
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  154 (261)
T 3n74_A           88 VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR  154 (261)
T ss_dssp             EECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC
T ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC
Confidence            999872            1               12234444543      5789999998776654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.08  E-value=6.5e-06  Score=73.88  Aligned_cols=107  Identities=16%  Similarity=0.203  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH---hHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHHC--
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE---HKAQLL----KELGVDR-V--INYKA-EDIKTVFKEEF--  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~---~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~~--  294 (362)
                      -.++++||+||++++|.++++.+...|++|++++++.   ++.+.+    ++.|... .  .|..+ +++.+.+....  
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999986543   333333    2234432 2  23333 22333333221  


Q ss_pred             CCceeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          295 PKGFDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       295 ~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      -+++|++++|+|.           +               ..+.+++.|+++|++|.+++......
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~  154 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY  154 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC
Confidence            1469999999982           1               12234445667899999998765444

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.08  E-value=1.5e-05  Score=72.10  Aligned_cols=109  Identities=13%  Similarity=0.244  Sum_probs=72.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-------------CHhHHHHHH----HcCCcEE---EeCCC-ccH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-------------GEHKAQLLK----ELGVDRV---INYKA-EDI  286 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-------------~~~~~~~l~----~~g~~~v---~~~~~-~~~  286 (362)
                      -.|++++|+||++++|.++++.+...|++|+++++             +.++.+.+.    +.|....   .|..+ +++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            46899999999999999999999999999999987             555555442    3444322   24443 223


Q ss_pred             HHHHHHHC--CCceeEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCC
Q 018013          287 KTVFKEEF--PKGFDIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGE  335 (362)
Q Consensus       287 ~~~~~~~~--~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~  335 (362)
                      .+.+....  -+++|++++++|.           +               ..+.+++.|.+   +|+||.+++...+.+.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  172 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT  172 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence            33333221  1469999999882           1               12334444532   6899999998876654


Q ss_pred             C
Q 018013          336 H  336 (362)
Q Consensus       336 ~  336 (362)
                      .
T Consensus       173 ~  173 (280)
T 3pgx_A          173 P  173 (280)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.07  E-value=1e-05  Score=72.51  Aligned_cols=107  Identities=14%  Similarity=0.142  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC-c-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV-D-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~-~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      .+++++|+||+|  |+|.++++.+...|++|++++++++..+.++    +.+. . .+  .|..+ +++.+.+....  -
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            578999999994  5999999998889999999998765444443    2332 1 22  34444 33333333321  1


Q ss_pred             CceeEEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          296 KGFDIIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       296 ~g~Dvvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +++|++++++|..                              ..+.++..++++|+||.+++.....+.
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  155 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM  155 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC
Confidence            4699999998720                              123444556678999999998876654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.07  E-value=9.4e-06  Score=72.89  Aligned_cols=109  Identities=15%  Similarity=0.123  Sum_probs=73.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----H-cCCc--EE--EeCCC-ccHHHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----E-LGVD--RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~-~g~~--~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      -.++++||+||++++|.++++.+...|++|++++++.++.+.+.    + .+..  ..  .|..+ +++.+.+....  -
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999988766543    2 3322  22  24333 22333333221  1


Q ss_pred             CceeEEEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          296 KGFDIIYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       296 ~g~Dvvid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      +++|++++++|.           +               ..+.+++.+.+  +|+||.+++.....+..
T Consensus        86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  154 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP  154 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC
Confidence            469999999982           1               12344555543  68999999887766543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.07  E-value=3e-05  Score=69.23  Aligned_cols=106  Identities=17%  Similarity=0.224  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHH---HCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKE---EFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~---~~~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.. ..  .|..+ +++.+.+..   ..+++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999887765442    23443 22  23333 223333322   23256


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++++++|.           +               ..+.+++.|+  ..|+||.+++...+.+
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  152 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA  152 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC
Confidence            9999999872           1               1223344443  3589999999876554

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.07  E-value=1.7e-05  Score=69.70  Aligned_cols=101  Identities=24%  Similarity=0.324  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC-cEE-EeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV-DRV-INYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~-~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      -.+++|||+||+|++|..+++.+...|++|+++++++++.+.+...++ ..+ .|.. +.+    .+.. +++|+||+++
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~----~~~~-~~~D~vi~~a   92 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDF----SHAF-ASIDAVVFAA   92 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCC----GGGG-TTCSEEEECC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHH----HHHH-cCCCEEEECC
Confidence            357899999999999999999999999999999999998888877777 433 2333 222    1122 3799999999


Q ss_pred             ChH--------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          306 GGD--------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       306 g~~--------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      |..              .....++.++  ..++||.+++......
T Consensus        93 g~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~  137 (236)
T 3e8x_A           93 GSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP  137 (236)
T ss_dssp             CCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG
T ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC
Confidence            831              1123333333  2479999999776554

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.07  E-value=2e-05  Score=72.11  Aligned_cols=109  Identities=15%  Similarity=0.241  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC------------HhHHHHH----HHcCCcEE---EeCCC-ccHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG------------EHKAQLL----KELGVDRV---INYKA-EDIK  287 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~------------~~~~~~l----~~~g~~~v---~~~~~-~~~~  287 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++            .++.+.+    ++.+....   .|..+ +++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            468999999999999999999999999999999876            4444333    34554422   23333 2233


Q ss_pred             HHHHHHC--CCceeEEEECCCh----H-----------------------HHHHHHHHhc---cCCEEEEEcCcccccCC
Q 018013          288 TVFKEEF--PKGFDIIYESVGG----D-----------------------MFNLCLKALA---VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       288 ~~~~~~~--~~g~Dvvid~~g~----~-----------------------~~~~~~~~l~---~~G~~v~~G~~~~~~~~  335 (362)
                      +.+....  -+++|++++|+|.    .                       ..+.++..|.   .+|+||.+++.....+.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  185 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA  185 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence            3333221  1469999999872    1                       1223344442   36899999998876654


Q ss_pred             C
Q 018013          336 H  336 (362)
Q Consensus       336 ~  336 (362)
                      .
T Consensus       186 ~  186 (299)
T 3t7c_A          186 E  186 (299)
T ss_dssp             T
T ss_pred             C
Confidence            3

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.06  E-value=1.4e-05  Score=72.24  Aligned_cols=107  Identities=19%  Similarity=0.228  Sum_probs=72.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCCc-cHHHHHHHHC-CCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKAE-DIKTVFKEEF-PKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~~-~~~~~~~~~~-~~g~  298 (362)
                      -.|++++|+||++++|.++++.+...|++|+++++++++.+.+.    +.+... .  .|..+. ++.+.+.... .+++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            36799999999999999999999999999999999877655442    334432 2  233332 2333322211 1569


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~  334 (362)
                      |++++++|.           +               ..+.+++.|  +..|+||.+++.....+
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~  174 (275)
T 4imr_A          111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP  174 (275)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC
Confidence            999999982           1               123344444  34689999999877654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.06  E-value=2.3e-05  Score=70.13  Aligned_cols=106  Identities=19%  Similarity=0.257  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcC--Cc-EEEeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELG--VD-RVINYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g--~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+. ++.  +. ...|..+ +++.+.+....  -+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999988776654 332  22 1234443 22333333221  1369999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHhc--c-CCEEEEEcCcccccC
Q 018013          302 YESVGG-----------D---------------MFNLCLKALA--V-YGRLIVIGMISQYQG  334 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l~--~-~G~~v~~G~~~~~~~  334 (362)
                      |+++|.           +               ..+.+++.+.  . .|+||.+++.....+
T Consensus        91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  152 (263)
T 3ak4_A           91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG  152 (263)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC
Confidence            999872           0               1122333342  2 589999998776554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.06  E-value=3.2e-05  Score=70.53  Aligned_cols=109  Identities=18%  Similarity=0.162  Sum_probs=73.6

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGG--TGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~--vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|+++||+||+|+  +|.++++.+...|++|++++++++..+.++    +.+....+  |..+ +++.+.+....  -+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46899999999855  999999999999999999999865444332    33432333  3333 23333333221  24


Q ss_pred             ceeEEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++|+++|..                              ..+.+++.++++|+||.+++........
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~  178 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP  178 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC
Confidence            699999998720                              2234566677899999999988766543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.05  E-value=2e-05  Score=71.61  Aligned_cols=106  Identities=18%  Similarity=0.203  Sum_probs=71.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -+++++||+||++++|.++++.+...|++|++++++.++.+.+. +   .+.. ..  .|..+ +++.+.+....  -++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999999988776654 2   2333 22  23333 22333333221  146


Q ss_pred             eeEEEECCCh--H-------------------------HHHHHHHHhc--cCCEEEEEcCccccc
Q 018013          298 FDIIYESVGG--D-------------------------MFNLCLKALA--VYGRLIVIGMISQYQ  333 (362)
Q Consensus       298 ~Dvvid~~g~--~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~  333 (362)
                      +|++++++|.  .                         ..+.+++.|+  .+|+||.+++.....
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~  170 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTR  170 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhcc
Confidence            9999999872  0                         1234444453  368999999877654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.05  E-value=2.3e-05  Score=68.68  Aligned_cols=104  Identities=16%  Similarity=0.205  Sum_probs=70.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc---EEEeCCCc-cHHHHHHHHCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD---RVINYKAE-DIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~---~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      +++||+||+|++|.++++.+...|++|+++++++++.+.+. +++..   ...|..+. ++.+.+... ...+|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-~~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL-DSIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSC-SSCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHH-hhcCCEEEEeC
Confidence            46999999999999999999999999999999998887765 34332   22344432 233333332 23359999998


Q ss_pred             Ch-----------H---------------HHHHHHHHhcc-CCEEEEEcCcccccCC
Q 018013          306 GG-----------D---------------MFNLCLKALAV-YGRLIVIGMISQYQGE  335 (362)
Q Consensus       306 g~-----------~---------------~~~~~~~~l~~-~G~~v~~G~~~~~~~~  335 (362)
                      |.           +               ..+.+++.+.+ +++||.+++.....+.
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~  137 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK  137 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC
Confidence            72           1               12334555544 5699999988776654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.05  E-value=1.6e-05  Score=70.72  Aligned_cols=102  Identities=25%  Similarity=0.335  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      -.++++||+||+|++|.++++.+...|++|++++++++..   ++++...+ .|. .+++.+.+....  ++|++|+++|
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~D~-~~~~~~~~~~~~--~iD~lv~~Ag   90 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KRSGHRYVVCDL-RKDLDLLFEKVK--EVDILVLNAG   90 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHTCSEEEECCT-TTCHHHHHHHSC--CCSEEEECCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH---HhhCCeEEEeeH-HHHHHHHHHHhc--CCCEEEECCC
Confidence            5689999999999999999999988999999999987443   34443222 233 345555554443  7999999987


Q ss_pred             h-----------HH---------------HHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          307 G-----------DM---------------FNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       307 ~-----------~~---------------~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      .           +.               .+.+++.++.  .|+||.+++...+...
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  147 (249)
T 1o5i_A           91 GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI  147 (249)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC
Confidence            2           11               2234444533  4899999998876653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.05  E-value=9.5e-06  Score=73.04  Aligned_cols=108  Identities=20%  Similarity=0.230  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL----KELGVDR-V--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      ..++++||+||++++|.++++.+...|++|+++ .++.++.+.+    ++.+... .  .|..+ +++.+.+....  -+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999998888889999987 4444444433    3345432 2  24333 22333333221  14


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++++++|.           +               ..+.+++.++++|+||.+++.......
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  169 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH  169 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC
Confidence            69999999972           1               233556667788999999987665443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.04  E-value=2.1e-05  Score=71.04  Aligned_cols=109  Identities=16%  Similarity=0.203  Sum_probs=71.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-------------CHhHHHHH----HHcCCcEE---EeCCC-ccH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-------------GEHKAQLL----KELGVDRV---INYKA-EDI  286 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-------------~~~~~~~l----~~~g~~~v---~~~~~-~~~  286 (362)
                      -.|+++||+||++++|.++++.+...|++|+++++             +.++.+.+    ...+....   .|..+ +++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            46799999999999999999999999999999987             45554433    23344322   23333 223


Q ss_pred             HHHHHHHC--CCceeEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccCC
Q 018013          287 KTVFKEEF--PKGFDIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQGE  335 (362)
Q Consensus       287 ~~~~~~~~--~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~  335 (362)
                      .+.+....  -+++|++++++|.           +               ..+.++..+.+   +|+||.+++.......
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  168 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ  168 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence            33333221  1469999999872           1               12334444433   6899999998876654


Q ss_pred             C
Q 018013          336 H  336 (362)
Q Consensus       336 ~  336 (362)
                      .
T Consensus       169 ~  169 (277)
T 3tsc_A          169 P  169 (277)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.04  E-value=5.2e-05  Score=65.76  Aligned_cols=102  Identities=12%  Similarity=0.007  Sum_probs=69.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HCCCEEEEecCCHh-HHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          231 KKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCGGEH-KAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~-~~G~~Vi~~~~~~~-~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ++|+|+||+|++|.++++.+. ..|++|++++++++ +.+.+...+.. .++..+-.+..+.....  .++|++|+++|.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~vv~~ag~   83 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAV--TNAEVVFVGAME   83 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHH--TTCSEEEESCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHH--cCCCEEEEcCCC
Confidence            569999999999999998887 89999999999988 76665422322 23322222222222212  368999999985


Q ss_pred             HH--HHHHHHHhccC--CEEEEEcCcccccC
Q 018013          308 DM--FNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       308 ~~--~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      ..  .+.+++.++..  |+||.+++...+..
T Consensus        84 ~n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~  114 (221)
T 3r6d_A           84 SGSDMASIVKALSRXNIRRVIGVSMAGLSGE  114 (221)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEEETTTTSC
T ss_pred             CChhHHHHHHHHHhcCCCeEEEEeeceecCC
Confidence            21  45566666543  69999988876654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.04  E-value=2.1e-05  Score=71.56  Aligned_cols=107  Identities=22%  Similarity=0.318  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEecCCHhHHHHHHH-c-----CCc-EE--EeCCC-ccHHHHHHHHCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGN---TVVATCGGEHKAQLLKE-L-----GVD-RV--INYKA-EDIKTVFKEEFP  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~---~Vi~~~~~~~~~~~l~~-~-----g~~-~v--~~~~~-~~~~~~~~~~~~  295 (362)
                      .++++||+||++++|.++++.+...|+   +|++++++.++.+.+.+ +     +.. ..  .|..+ +++.+.++....
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999998887776676   99999999888766532 1     333 22  34444 445555544322


Q ss_pred             --CceeEEEECCCh------------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          296 --KGFDIIYESVGG------------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       296 --~g~Dvvid~~g~------------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                        +++|++++++|.            +               ..+.+++.|  +..|+||.+++.......
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~  182 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY  182 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC
Confidence              469999999882            0               122344444  346999999998876654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.03  E-value=2.7e-05  Score=71.11  Aligned_cols=109  Identities=16%  Similarity=0.140  Sum_probs=73.1

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.++++||+||+|  ++|.++++.+...|++|++++++++..+.++    +.+....+  |..+ +++.+.+....  -+
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3589999999987  9999999999899999999999875444432    34443333  4333 23333333321  14


Q ss_pred             ceeEEEECCChH------------------------------HHHHHHHHhccCCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGGD------------------------------MFNLCLKALAVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~~------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++++|+|..                              ..+.+++.++++|+||.+++........
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~  177 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP  177 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC
Confidence            699999998720                              1223444566789999999988766543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.03  E-value=4.4e-05  Score=68.47  Aligned_cols=104  Identities=24%  Similarity=0.281  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. +++.. ..  .|..+ +++.+.+....  -+++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            5789999999999999999999999999999999988776654 34322 22  24333 22333332221  1469999


Q ss_pred             EECCChH--------------------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          302 YESVGGD--------------------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      ++++|..                          ..+.+++.++..|+||.+++...+
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  141 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL  141 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc
Confidence            9998721                          122344445347999999998775

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.03  E-value=1.5e-06  Score=70.62  Aligned_cols=109  Identities=14%  Similarity=0.123  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcEEEeCCCccHHHHHHHH
Q 018013          215 GLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       215 ~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~v~~~~~~~~~~~~~~~  293 (362)
                      +.+++.++.......+++|+|+| +|.+|.++++.++..|++|+++++++++.+.+ ++++.+. ...  .++.+.+   
T Consensus         6 ~sv~~~a~~~~~~~~~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~--~~~~~~~---   78 (144)
T 3oj0_A            6 VSIPSIVYDIVRKNGGNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLI--NDIDSLI---   78 (144)
T ss_dssp             CSHHHHHHHHHHHHCCCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EEC--SCHHHHH---
T ss_pred             ccHHHHHHHHHHhccCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-Eee--cCHHHHh---
Confidence            45667777666665699999999 69999999999988999999999999887664 5677543 222  2333333   


Q ss_pred             CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccc
Q 018013          294 FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       294 ~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                        .++|+|++|++..........+++++.++.++.+...
T Consensus        79 --~~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p~~~  115 (144)
T 3oj0_A           79 --KNNDVIITATSSKTPIVEERSLMPGKLFIDLGNPPNI  115 (144)
T ss_dssp             --HTCSEEEECSCCSSCSBCGGGCCTTCEEEECCSSCSB
T ss_pred             --cCCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCCccC
Confidence              2489999999853211122678899999999986543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=98.03  E-value=2.1e-05  Score=72.59  Aligned_cols=109  Identities=20%  Similarity=0.252  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC------------HhHHHHH----HHcCCcEE---EeCCC-ccHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG------------EHKAQLL----KELGVDRV---INYKA-EDIK  287 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~------------~~~~~~l----~~~g~~~v---~~~~~-~~~~  287 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++            .++.+.+    ++.+....   .|..+ +++.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            468999999999999999999999999999998765            4444332    33454422   23333 2333


Q ss_pred             HHHHHHC--CCceeEEEECCCh-----------H---------------HHHHHHHHhc---cCCEEEEEcCcccccCCC
Q 018013          288 TVFKEEF--PKGFDIIYESVGG-----------D---------------MFNLCLKALA---VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       288 ~~~~~~~--~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~---~~G~~v~~G~~~~~~~~~  336 (362)
                      +.+....  -+++|++|+++|.           +               ..+.+++.|.   .+|+||.+++...+.+..
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~  203 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP  203 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence            3333221  1469999999882           1               1223444452   268999999988766543

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.02  E-value=2.2e-05  Score=71.17  Aligned_cols=108  Identities=16%  Similarity=0.189  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHHH----Hc-CCcE-EE--eCCC-ccHHHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLLK----EL-GVDR-VI--NYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l~----~~-g~~~-v~--~~~~-~~~~~~~~~~~--~  295 (362)
                      -.++++||+||++++|.++++.+...|++|+++++ +.++.+.+.    +. +... .+  |..+ +++.+.+....  -
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            35789999999999999999999999999999998 555544432    22 3332 22  3333 22333333221  2


Q ss_pred             CceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          296 KGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       296 ~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +++|++++++|.           +               ..+.+++.|.  ..|+||.+++.....+.
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  170 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS  170 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC
Confidence            469999999883           1               1223444443  34899999998876654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.02  E-value=8e-06  Score=72.74  Aligned_cols=103  Identities=19%  Similarity=0.190  Sum_probs=71.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHC--CCceeEEEEC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      +-++++||+||+|++|.++++.+...|++|++++++.++.+.     ....++..+ +++.+.+....  .+++|+++++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            557899999999999999999999999999999998764321     112233333 33444444332  2479999999


Q ss_pred             CCh------------H---------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          305 VGG------------D---------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       305 ~g~------------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +|.            +               ..+.+++.++++|+||.+++.....+.
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  152 (251)
T 3orf_A           95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT  152 (251)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC
T ss_pred             CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC
Confidence            882            0               123455667778999999998876654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.02  E-value=2.6e-05  Score=69.50  Aligned_cols=105  Identities=19%  Similarity=0.224  Sum_probs=70.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      +++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.. ..  .|..+ +++.+.+....  -+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999999887765542    23433 22  24333 22333333221  24699


Q ss_pred             EEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccC
Q 018013          300 IIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQG  334 (362)
Q Consensus       300 vvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~  334 (362)
                      ++|+++|.           +               ..+.+++.+..   .|+||.+++.....+
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  145 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG  145 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC
Confidence            99999872           1               12344555543   589999998776554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.02  E-value=1.4e-05  Score=71.64  Aligned_cols=109  Identities=17%  Similarity=0.219  Sum_probs=72.6

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEE--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .++++|||+||+  +++|.++++.+...|++|++++++++..+.++    +.+...+  .|..+ +++.+.+....  -+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            678999999998  99999999999899999999988754443332    3343222  34444 22333333221  24


Q ss_pred             ceeEEEECCCh----------------H---------------HHHHHHHHhccCCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGG----------------D---------------MFNLCLKALAVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~----------------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++|+|+|.                +               ..+.+++.++++|+||.+++.....+..
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~  162 (271)
T 3ek2_A           92 SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP  162 (271)
T ss_dssp             CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT
T ss_pred             CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC
Confidence            69999999872                0               1223344556689999999988766543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.02  E-value=3.3e-05  Score=68.89  Aligned_cols=106  Identities=17%  Similarity=0.206  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE--eCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI--NYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~--~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+..+++.. ..+  |..+ +++.+.++...  -+++|++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999999999999999998777333344432 333  3333 22333333221  146999999


Q ss_pred             CCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          304 SVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       304 ~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      ++|.           +               ..+.+++.|+.  .|+||.+++.....+.
T Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  143 (256)
T 2d1y_A           84 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE  143 (256)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC
Confidence            9872           1               12234444433  5899999998765543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.02  E-value=1.9e-05  Score=70.56  Aligned_cols=107  Identities=21%  Similarity=0.317  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc-----CCc-EE--EeCCC-ccHHHHHHHHC-CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL-----GVD-RV--INYKA-EDIKTVFKEEF-PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~-----g~~-~v--~~~~~-~~~~~~~~~~~-~~g  297 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. ++     +.. ..  .|..+ +++.+.+.... ..+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999998889999999999887765543 22     322 22  24433 22333333221 113


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+++|.           +.               .+.+++.+.  ..|+||.+++...+.+.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  151 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW  151 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC
Confidence            9999999882           11               134455553  34899999998776553

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=98.02  E-value=1.8e-05  Score=74.14  Aligned_cols=107  Identities=17%  Similarity=0.291  Sum_probs=72.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-----------HHHHHHcCCcEE---EeCCC-ccHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-----------AQLLKELGVDRV---INYKA-EDIKTVFKE  292 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-----------~~~l~~~g~~~v---~~~~~-~~~~~~~~~  292 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++           .+.+++.|....   .|..+ +++.+.+..
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            368999999999999999999999999999999987653           233344554322   34444 223333333


Q ss_pred             HC--CCceeEEEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          293 EF--PKGFDIIYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       293 ~~--~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      ..  -+++|++|+|+|.           +               ..+.++..|+.  .|+||.+++......
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~  194 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP  194 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC
Confidence            21  1369999999982           1               22345555544  489999998776544

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.01  E-value=2.1e-05  Score=71.14  Aligned_cols=109  Identities=17%  Similarity=0.228  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ..++++||+||++++|.++++.+...|++|++++++.++.+.+.    +.+... .  .|..+ +++.+.+....  -++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999988889999999999988766543    334432 2  23333 22333333221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHH--Hh--ccCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLK--AL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~--~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|.           +               ..+.+++  .+  +..|+||.+++.....+..
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~  170 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM  170 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC
Confidence            9999999872           1               1122333  12  2358999999988766543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.01  E-value=1.6e-05  Score=71.88  Aligned_cols=108  Identities=21%  Similarity=0.220  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+.+. +++.. ..  .|..+ +++.+.+....  .+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4689999999999999999999999999999999988776664 44433 22  23333 22333333221  1469999


Q ss_pred             EECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          302 YESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      |+++|.           +               ..+.+++.++  ..|+||.+++.....+..
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  146 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFA  146 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCC
Confidence            999882           1               1334455553  358999999988766543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.01  E-value=2.4e-05  Score=70.98  Aligned_cols=109  Identities=16%  Similarity=0.180  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC----------------HhHHHHHH----HcCCcE-E--EeCCC-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG----------------EHKAQLLK----ELGVDR-V--INYKA-  283 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~----------------~~~~~~l~----~~g~~~-v--~~~~~-  283 (362)
                      -.|++++|+||++++|.++++.+...|++|++++++                .++.+.+.    +.+... .  .|..+ 
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            468999999999999999999999999999999776                55544432    234432 2  24333 


Q ss_pred             ccHHHHHHHHC--CCceeEEEECCCh------------H---------------HHHHHHHHhcc---CCEEEEEcCccc
Q 018013          284 EDIKTVFKEEF--PKGFDIIYESVGG------------D---------------MFNLCLKALAV---YGRLIVIGMISQ  331 (362)
Q Consensus       284 ~~~~~~~~~~~--~~g~Dvvid~~g~------------~---------------~~~~~~~~l~~---~G~~v~~G~~~~  331 (362)
                      +++.+.+....  -+++|++++++|.            +               ..+.+++.|..   +|+||.+++...
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            23333333221  1369999999882            1               12234444533   689999999887


Q ss_pred             ccCCC
Q 018013          332 YQGEH  336 (362)
Q Consensus       332 ~~~~~  336 (362)
                      .....
T Consensus       169 ~~~~~  173 (286)
T 3uve_A          169 LKAYP  173 (286)
T ss_dssp             TSCCT
T ss_pred             ccCCC
Confidence            66543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.01  E-value=1.6e-05  Score=71.22  Aligned_cols=106  Identities=18%  Similarity=0.282  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+.    +.|... .  .|..+ +++.+.+....  -+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999887765543    234432 2  23333 22333332221  1369


Q ss_pred             eEEEECCChH---------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          299 DIIYESVGGD---------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~---------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      |++++++|..                           ..+.+++.+.  ..|+||.+++.....+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  150 (262)
T 1zem_A           86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG  150 (262)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC
Confidence            9999998621                           1223444443  3589999998776544

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.01  E-value=5.4e-05  Score=66.63  Aligned_cols=105  Identities=17%  Similarity=0.207  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-c-CCcEE-EeCCCc-cHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-L-GVDRV-INYKAE-DIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~-g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~  304 (362)
                      ++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+ . +...+ .|..+. ++.+.+.  .-+++|++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG--GIGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            57899999999999999999999999999999998887765543 2 33322 233332 2222222  12468999999


Q ss_pred             CCh-----------HH---------------HHHHHHHhc--c-CCEEEEEcCcccccCC
Q 018013          305 VGG-----------DM---------------FNLCLKALA--V-YGRLIVIGMISQYQGE  335 (362)
Q Consensus       305 ~g~-----------~~---------------~~~~~~~l~--~-~G~~v~~G~~~~~~~~  335 (362)
                      +|.           +.               .+.+.+.+.  . .|+||.+++...+...
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  143 (244)
T 1cyd_A           84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF  143 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred             CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC
Confidence            881           11               223344443  2 5899999998776553

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.01  E-value=1.8e-05  Score=70.70  Aligned_cols=107  Identities=20%  Similarity=0.269  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-HHHHH-Hc----CCcE-EE--eCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-AQLLK-EL----GVDR-VI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~l~-~~----g~~~-v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++ .+.+. ++    +... .+  |..+ +++.+.+....  -+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999998766 54432 22    5432 22  3333 22333333221  14


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|+++|.           +               ..+.+++.|+  ..|+||.+++...+.+.
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  149 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS  149 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC
Confidence            69999999872           1               1233444443  35899999998775543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.01  E-value=1.8e-05  Score=71.44  Aligned_cols=106  Identities=15%  Similarity=0.283  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc---C---Cc-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL---G---VD-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~---g---~~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+. ++   .   .. ..  .|..+ +++.+.+....  -
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999988889999999999988766553 23   2   12 22  23333 22333332221  1


Q ss_pred             CceeEEEECCChH------------------------------HHHHHHHHhc-cCCEEEEEcCccc-ccC
Q 018013          296 KGFDIIYESVGGD------------------------------MFNLCLKALA-VYGRLIVIGMISQ-YQG  334 (362)
Q Consensus       296 ~g~Dvvid~~g~~------------------------------~~~~~~~~l~-~~G~~v~~G~~~~-~~~  334 (362)
                      +++|++|+++|..                              ..+.+++.|+ .+|+||.+++... +.+
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  155 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA  155 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC
Confidence            3699999998731                              0123344442 2699999998876 544

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.00  E-value=3.2e-05  Score=69.08  Aligned_cols=108  Identities=18%  Similarity=0.232  Sum_probs=71.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDR-V--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+++++|+||+|++|.++++.+...|++|++++++.++.+.+    ++.+... .  .|..+ +++.+.+....  -++
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999988766543    2334432 2  23333 22333332221  146


Q ss_pred             eeEEEECCCh------------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG------------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~------------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+++|.            +               ..+.+++.|+  ..|+||.+++...+.+.
T Consensus        92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  158 (260)
T 2zat_A           92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF  158 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC
Confidence            9999999872            0               1133444443  35899999998876553

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.00  E-value=2.7e-05  Score=68.84  Aligned_cols=107  Identities=31%  Similarity=0.443  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.. ..  .|..+ +++.+.+...  ..+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999998889999999999988766553    33543 22  23333 2333333332  23469


Q ss_pred             eEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      |++++++|.           +               ..+.+++.+  +..|+||.+++.....+.
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  148 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN  148 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC
Confidence            999999872           1               122334444  345899999987765553

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.00  E-value=2.2e-05  Score=71.75  Aligned_cols=106  Identities=21%  Similarity=0.297  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC---c-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV---D-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~---~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.   . .+  .|..+ +++.+.+....  -
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999889999999999987765542    2333   2 22  23333 22333333221  1


Q ss_pred             CceeEEEECCCh----H------------------------HHHHHHHHhc-cCCEEEEEcCcccccC
Q 018013          296 KGFDIIYESVGG----D------------------------MFNLCLKALA-VYGRLIVIGMISQYQG  334 (362)
Q Consensus       296 ~g~Dvvid~~g~----~------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~  334 (362)
                      +++|++|+++|.    .                        ..+.+++.+. .+|+||.+++......
T Consensus       105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~  172 (297)
T 1xhl_A          105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ  172 (297)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS
T ss_pred             CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccC
Confidence            369999999872    1                        1234445553 4599999998876554

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.99  E-value=6.3e-05  Score=66.58  Aligned_cols=102  Identities=21%  Similarity=0.248  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEE-EeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRV-INYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v-~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. ++|+..+ .|..+ +++.+.+....  -+++|++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999999999999999999999999999999988776654 4564322 34443 22333332221  146999999


Q ss_pred             CCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcc
Q 018013          304 SVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMIS  330 (362)
Q Consensus       304 ~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~  330 (362)
                      ++|.           +               ..+.+++.|++  .|+||.+++..
T Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  138 (245)
T 1uls_A           84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV  138 (245)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch
Confidence            9882           1               12334455543  58999999877

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.99  E-value=1e-05  Score=72.45  Aligned_cols=105  Identities=16%  Similarity=0.198  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|+++||+||++++|.++++.+...|++|+++ .++.++.+.+    ++.+.. ..+  |..+ +++.+.+++..  -+
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999998 5554443333    334543 222  3333 22333333221  14


Q ss_pred             ceeEEEECCChH---------------------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          297 GFDIIYESVGGD---------------------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       297 g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      ++|++++++|..                           ..+.+++.++++|+||.+++....
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~  148 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGR  148 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhc
Confidence            699999998721                           122344456668999999987765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.99  E-value=8.7e-06  Score=72.69  Aligned_cols=109  Identities=18%  Similarity=0.241  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.++++||+||++++|.++++.+...|++|+++++++++.+.+. +++.. ..  .|..+ +++.+.++...  -+++|+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35789999999999999999999999999999999887765543 44432 22  23333 22333333221  136999


Q ss_pred             EEECCCh---------------H---------------HHHHHHHHhc--------cCCEEEEEcCcccccCCC
Q 018013          301 IYESVGG---------------D---------------MFNLCLKALA--------VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~---------------~---------------~~~~~~~~l~--------~~G~~v~~G~~~~~~~~~  336 (362)
                      +++++|.               +               ..+.+++.|.        .+|+||.+++...+.+..
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence            9999872               1               1223445554        368999999987765543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.99  E-value=1.7e-05  Score=71.74  Aligned_cols=107  Identities=13%  Similarity=0.185  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H----cCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E----LGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~----~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .|+++||+||++++|.++++.+...|++|++++++.++.+.+. +    .+.. ..  .|..+ +++.+.+....  -++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999999887655442 2    3443 22  24433 22333333221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|.           +               ..+.+++.+  +.+|+||.+++.....+.
T Consensus       106 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (277)
T 4fc7_A          106 IDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ  171 (277)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC
T ss_pred             CCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC
Confidence            9999999982           1               112334433  347999999988765553

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.98  E-value=4.5e-05  Score=68.31  Aligned_cols=105  Identities=20%  Similarity=0.294  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcC-Cc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELG-VD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g-~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+.    +.+ .. ..+  |..+ +++.+.+....  -+
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            35799999999999999999999999999999999988766543    233 22 222  3333 22333332221  14


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccc
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQY  332 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~  332 (362)
                      ++|++++++|.           +               ..+.+++.|.  ..|+||.+++....
T Consensus        88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  151 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGP  151 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence            69999999882           1               1223444443  46899999987764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.98  E-value=3.5e-05  Score=69.80  Aligned_cols=108  Identities=15%  Similarity=0.107  Sum_probs=68.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL----KELGVDR-V--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.++++||+||++++|.++++.+...|++|+++++ +.++.+.+    ++.|... .  .|..+ +++.+.+....  -+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999985 55554443    3345432 2  24444 33444433321  13


Q ss_pred             ceeEEEECCCh--H--------------------------HHHHHHHHhcc-----CCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG--D--------------------------MFNLCLKALAV-----YGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~--~--------------------------~~~~~~~~l~~-----~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|+++|.  .                          ..+.+++.+.+     +|+||.+++.....+.
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  178 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS  178 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC
Confidence            69999999874  0                          12344555543     6899999998776553

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.98  E-value=4e-05  Score=67.75  Aligned_cols=107  Identities=14%  Similarity=0.163  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcC---CcEEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELG---VDRVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g---~~~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+. ++.   --.++  |..+ +++.+.+....  -+++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999889999999999887766553 332   11222  3333 22333332211  13699


Q ss_pred             EEEECCCh-----------H---------------HHHHHHHHhccC---CEEEEEcCcccccCC
Q 018013          300 IIYESVGG-----------D---------------MFNLCLKALAVY---GRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~-----------~---------------~~~~~~~~l~~~---G~~v~~G~~~~~~~~  335 (362)
                      ++|+++|.           +               ..+.+++.+...   |+||.+++...+.+.
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  149 (251)
T 1zk4_A           85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD  149 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC
Confidence            99999872           0               123345555432   799999988776543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.98  E-value=2.9e-05  Score=70.11  Aligned_cols=109  Identities=20%  Similarity=0.243  Sum_probs=69.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH---cCCc-EE--EeCCCc-cHHHHHHHH-CCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE---LGVD-RV--INYKAE-DIKTVFKEE-FPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~---~g~~-~v--~~~~~~-~~~~~~~~~-~~~g~D  299 (362)
                      -.|+++||+||++++|.++++.+...|++|+++++++...+..++   .+.. ..  .|..+. ++.+..+.. ..+++|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            468999999999999999999999999999999976543333333   3433 22  233332 222221111 114699


Q ss_pred             EEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          300 IIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       300 vvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++++++|.           +               ..+.+++.+  +..|+||.+++...+.+..
T Consensus       109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~  173 (273)
T 3uf0_A          109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR  173 (273)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS
T ss_pred             EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC
Confidence            99999872           1               122333444  2458999999988776643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.98  E-value=6.2e-05  Score=65.99  Aligned_cols=106  Identities=15%  Similarity=0.169  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-----HcCCcE-EE--eCCCc-cHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-----ELGVDR-VI--NYKAE-DIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-----~~g~~~-v~--~~~~~-~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+.+.     +.+... ++  |..+. ++.+.+....  -++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999999988766542     334442 22  33332 2222221111  136


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHh-ccCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKAL-AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l-~~~G~~v~~G~~~~~~~  334 (362)
                      +|++++++|.           +               ..+.+++.| +.+|++|.+++......
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~  144 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL  144 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc
Confidence            9999999872           1               123344444 34788888887666544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.97  E-value=1.5e-05  Score=70.44  Aligned_cols=103  Identities=22%  Similarity=0.225  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE--eCCC-ccHHHHHHH---HCC-CceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI--NYKA-EDIKTVFKE---EFP-KGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~--~~~~-~~~~~~~~~---~~~-~g~Dv  300 (362)
                      ..+++++|+||+|++|.++++.+...|++|+++++++++.+     +....+  |..+ +++.+.++.   ..+ +++|+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            46789999999999999999999999999999998765432     111121  2222 222222222   222 47999


Q ss_pred             EEECCCh--------H-------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          301 IYESVGG--------D-------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~--------~-------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +++++|.        +                   ..+.+++.++++|+||.+++...+...
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  141 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT  141 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC
Confidence            9999872        1                   122345556667999999998776553

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.97  E-value=2.8e-05  Score=69.04  Aligned_cols=105  Identities=26%  Similarity=0.313  Sum_probs=71.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHCC--CceeEEEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEFP--KGFDIIYE  303 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~~--~g~Dvvid  303 (362)
                      ++++|+||+|++|.++++.+...|++|++++++.++.+.+. +++.. ..  .|..+ +++.+.+.....  +++|++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            47999999999999999999889999999999988776654 44433 22  23333 233344433322  46999999


Q ss_pred             CCCh------------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          304 SVGG------------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       304 ~~g~------------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|.            +               ..+.+++.|.  ..|+||.+++.....+.
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  141 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY  141 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC
Confidence            9872            0               1223444442  36999999998776553

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.97  E-value=1.2e-05  Score=70.67  Aligned_cols=102  Identities=20%  Similarity=0.251  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE--eCCC-ccHHHHHHH---HCC-CceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI--NYKA-EDIKTVFKE---EFP-KGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~--~~~~-~~~~~~~~~---~~~-~g~Dvv  301 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+     +....+  |..+ +++.+.++.   ..+ +++|++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            3678999999999999999999999999999998866432     111122  1111 122222222   222 479999


Q ss_pred             EECCCh--------H-------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          302 YESVGG--------D-------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~--------~-------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      ++++|.        +                   ..+.+++.++++|+||.+++...+.+.
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  137 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT  137 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC
Confidence            999881        1                   123455566678999999998776553

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.97  E-value=6.6e-05  Score=65.72  Aligned_cols=107  Identities=19%  Similarity=0.188  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEE--eCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVI--NYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~--~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+. +++-...+  |..+ +++.+.+....  -+++|++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999999999999999999999999999999988776654 34322222  3333 22333332221  13699999


Q ss_pred             ECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          303 ESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       303 d~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      +++|.           +               ..+.+++.++.  .|+||.+++...+.+.
T Consensus        84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  144 (234)
T 2ehd_A           84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF  144 (234)
T ss_dssp             ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC
Confidence            99872           0               11344555543  5899999998776543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.96  E-value=5.3e-05  Score=66.89  Aligned_cols=109  Identities=18%  Similarity=0.162  Sum_probs=72.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC--cEEE--eC--CC-ccHHHHHHHHC--
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV--DRVI--NY--KA-EDIKTVFKEEF--  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~--~~v~--~~--~~-~~~~~~~~~~~--  294 (362)
                      -.+++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.  ..++  +.  .+ +++.+.+....  
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            35889999999999999999999999999999999988776553    2332  2222  33  22 22222222221  


Q ss_pred             CCceeEEEECCCh------------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          295 PKGFDIIYESVGG------------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       295 ~~g~Dvvid~~g~------------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      -+++|++++++|.            +               ..+.+++.|+.  .|+||.+++.....+..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  162 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA  162 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC
Confidence            1369999999872            1               12344555543  58999999887766543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.96  E-value=6.3e-05  Score=67.38  Aligned_cols=107  Identities=21%  Similarity=0.201  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc-----CCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL-----GVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~-----g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+. ++     +.. ..  .|..+ +++.+.+....  -+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999887765432 22     211 22  23333 22333333221  13


Q ss_pred             ceeEEEECCCh---H---------------HHHHHHHHhcc-----CCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG---D---------------MFNLCLKALAV-----YGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~---~---------------~~~~~~~~l~~-----~G~~v~~G~~~~~~~~  335 (362)
                      ++|++++++|.   +               ..+.+++.+++     .|+||.+++...+.+.
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  147 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV  147 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC
Confidence            69999999982   1               12345555643     5899999998776553

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.96  E-value=0.00012  Score=56.42  Aligned_cols=93  Identities=19%  Similarity=0.201  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .+++|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+...+...+ .|..+  ... +.+.. .++|+||+|++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~-~~~~~-~~~d~vi~~~~   78 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKD--EAG-LAKAL-GGFDAVISAAP   78 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTC--HHH-HHHHT-TTCSEEEECSC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCC--HHH-HHHHH-cCCCEEEECCC
Confidence            4678999997 999999999999999 799999999999888876666533 33333  222 22222 36999999998


Q ss_pred             hHHHHHHHHH-hccCCEEEEE
Q 018013          307 GDMFNLCLKA-LAVYGRLIVI  326 (362)
Q Consensus       307 ~~~~~~~~~~-l~~~G~~v~~  326 (362)
                      .......... .+.+-.++.+
T Consensus        79 ~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           79 FFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             GGGHHHHHHHHHHTTCEEECC
T ss_pred             chhhHHHHHHHHHhCCCEEEe
Confidence            6544444444 4455555544

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.96  E-value=2.8e-05  Score=69.21  Aligned_cols=107  Identities=26%  Similarity=0.365  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH--HHHHHHcCCcEE-E--eCCC-ccHHHHHHHHC--CCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK--AQLLKELGVDRV-I--NYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~--~~~l~~~g~~~v-~--~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++  .+.+++.+.... +  |..+ +++.+.+....  -+++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999998899999999987651  223333354322 2  3333 22333333221  136999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      +|+++|.           +               ..+.+++.+++  .|+||.+++...+...
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  145 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS  145 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC
Confidence            9999872           1               22344455533  4899999998776543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.96  E-value=2.7e-05  Score=69.01  Aligned_cols=105  Identities=25%  Similarity=0.308  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE--EeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV--INYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v--~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+.++.-...  .|..+.+-.+.+.+.. +++|++++++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh-CCCCEEEECCc
Confidence            47899999999999999999999999999999998877655443321122  2333322222222222 46999999987


Q ss_pred             h-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          307 G-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       307 ~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      .           +               ..+.+++.|.  ..|+||.+++......
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  139 (246)
T 2ag5_A           84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK  139 (246)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB
T ss_pred             cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcC
Confidence            2           1               1223333342  3689999998776544

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.95  E-value=2.2e-05  Score=70.63  Aligned_cols=108  Identities=19%  Similarity=0.273  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.++++||+||++++|.++++.+...|++|+++++ +.++.+.+    ++.+... .+  |..+ +++.+.+....  -+
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999887 55544443    3344432 22  3333 22333333221  14


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++++++|.           +               ..+.+++.+  +..|+||.+++.....+.
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  172 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN  172 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC
Confidence            69999999872           1               122344444  346899999987765543

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.95  E-value=3.6e-05  Score=68.84  Aligned_cols=106  Identities=19%  Similarity=0.224  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHH---HCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKE---EFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~---~~~~g  297 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.. ..  .|..+ +++.+.+..   ..+++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999887665442    23443 22  23333 223333322   22256


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|..                          ..+.+++.++  ..|+||.+++...+..
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  157 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS  157 (266)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC
Confidence            99999998721                          1223333333  3589999999876554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.94  E-value=2.4e-05  Score=69.68  Aligned_cols=108  Identities=18%  Similarity=0.202  Sum_probs=70.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHH-HcCCcE-E--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLK-ELGVDR-V--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~-~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      |++++|+||++++|.++++.+...  |++|+.+.+++++.+.+. +++... .  .|..+ +++.+.+....  -+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            678999999999999988766555  579999999988877764 445432 2  23333 22333333221  146999


Q ss_pred             EEECCCh------------H---------------HHHHHHHHhc-cCCEEEEEcCcccccCCCC
Q 018013          301 IYESVGG------------D---------------MFNLCLKALA-VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       301 vid~~g~------------~---------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~~  337 (362)
                      +++++|.            +               ..+.+++.|+ .+|+||.+++.........
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~  146 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSS  146 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCC
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCC
Confidence            9999873            0               1223444443 4699999999887665433

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.94  E-value=5.6e-05  Score=68.29  Aligned_cols=107  Identities=21%  Similarity=0.255  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc---CCcEEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL---GVDRVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~---g~~~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. ++   +-...+  |..+ +++.+.+....  -+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999999999999987766543 32   311222  3333 22333333221  24699


Q ss_pred             EEEECCCh-----------H---------------HHHHHHHHhc--cC----CEEEEEcCcccccCC
Q 018013          300 IIYESVGG-----------D---------------MFNLCLKALA--VY----GRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~-----------~---------------~~~~~~~~l~--~~----G~~v~~G~~~~~~~~  335 (362)
                      ++|+++|.           +               ..+.+++.++  ..    |+||.+++...+...
T Consensus       108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~  175 (276)
T 2b4q_A          108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM  175 (276)
T ss_dssp             EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC
Confidence            99999872           1               1133444443  22    899999998776553

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.94  E-value=9.2e-06  Score=73.20  Aligned_cols=106  Identities=21%  Similarity=0.265  Sum_probs=69.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      ..+++|||+||++++|.++++.+...|++|+++++++++..   . ... ...|..+ +++.+.+....  -+++|++++
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~   87 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVN   87 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            67899999999999999999999899999999998765431   1 121 1234444 22333333221  146999999


Q ss_pred             CCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCCC
Q 018013          304 SVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       304 ~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~  337 (362)
                      ++|.           +               ..+.+++.|.  ..|+||.+++...+.....
T Consensus        88 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  149 (269)
T 3vtz_A           88 NAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN  149 (269)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC
Confidence            9872           1               1123444443  4689999999888766433

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.93  E-value=2.1e-05  Score=70.37  Aligned_cols=107  Identities=21%  Similarity=0.276  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+. ++... ..  .|..+ +++.+.+....  -+++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999998889999999999988776553 33322 22  24333 22333333221  1369999


Q ss_pred             EECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          302 YESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      |+++|.           +.               .+.+++.++  ..|+||.+++...+.+.
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  147 (260)
T 1nff_A           86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT  147 (260)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC
Confidence            999872           11               134455553  36899999998776553

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.93  E-value=3.2e-05  Score=70.22  Aligned_cols=78  Identities=18%  Similarity=0.167  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHHHHH-----HcCCc-EE--EeCCC-----ccHHHHHHHHC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQLLK-----ELGVD-RV--INYKA-----EDIKTVFKEEF  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~~l~-----~~g~~-~v--~~~~~-----~~~~~~~~~~~  294 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++. ++.+.+.     +.+.. ..  .|..+     +++.+.+....
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            578999999999999999998888899999999987 6554432     23433 22  23333     12222222221


Q ss_pred             --CCceeEEEECCC
Q 018013          295 --PKGFDIIYESVG  306 (362)
Q Consensus       295 --~~g~Dvvid~~g  306 (362)
                        -+++|++|+++|
T Consensus       102 ~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          102 RAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence              146999999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.93  E-value=7.3e-05  Score=67.40  Aligned_cols=107  Identities=18%  Similarity=0.298  Sum_probs=70.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC------------HhHHHHH----HHcCCcE-E--EeCCC-ccHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG------------EHKAQLL----KELGVDR-V--INYKA-EDIK  287 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~------------~~~~~~l----~~~g~~~-v--~~~~~-~~~~  287 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++            .++.+.+    ++.+... .  .|..+ +++.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            468999999999999999999999999999999876            4444433    3345442 2  23333 2233


Q ss_pred             HHHHHHC--CCceeEEEECCCh-------H---------------HHHHHHHHhcc---CCEEEEEcCcccccC
Q 018013          288 TVFKEEF--PKGFDIIYESVGG-------D---------------MFNLCLKALAV---YGRLIVIGMISQYQG  334 (362)
Q Consensus       288 ~~~~~~~--~~g~Dvvid~~g~-------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~  334 (362)
                      +.+....  -+++|++++++|.       +               ..+.+++.|.+   +|+||.+++......
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG  164 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC
Confidence            3333221  1469999999882       1               22344454533   689999998876544

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.93  E-value=3.8e-05  Score=70.06  Aligned_cols=105  Identities=21%  Similarity=0.301  Sum_probs=69.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cCC-c-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LGV-D-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g~-~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.++++||+||+|++|.++++.+...|++|++++++.++.+.+. +   .+. . ..  .|..+ +++.+.+....  -+
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999987765543 2   331 2 22  23333 22333332221  14


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccc
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQY  332 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~  332 (362)
                      ++|++|+++|.           +               ..+.+++.|+  ..|+||.+++....
T Consensus       119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~  182 (293)
T 3rih_A          119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGP  182 (293)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhc
Confidence            69999999872           1               1122333333  35899999987764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.93  E-value=2.1e-05  Score=69.68  Aligned_cols=106  Identities=26%  Similarity=0.355  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL----KELGVDR-V--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++ ++++.+.+    ++.+... .  .|..+ +++.+.++...  -++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999988 76665543    2335432 2  23333 22333333221  146


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|.           +.               .+.+++.|+  ..|+||.+++.....+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  147 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG  147 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC
Confidence            9999999872           01               234444453  3589999998766444

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.92  E-value=5.4e-05  Score=68.91  Aligned_cols=78  Identities=14%  Similarity=0.089  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHHH-----HcCCc-EE--EeCCC-c--------------
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLLK-----ELGVD-RV--INYKA-E--------------  284 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l~-----~~g~~-~v--~~~~~-~--------------  284 (362)
                      .+++++|+||++++|.++++.+...|++|++++ ++.++.+.+.     +.+.. ..  .|..+ +              
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   87 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence            578999999999999999999999999999999 8887665442     23433 22  24333 3              


Q ss_pred             ---cHHHHHHHHC--CCceeEEEECCC
Q 018013          285 ---DIKTVFKEEF--PKGFDIIYESVG  306 (362)
Q Consensus       285 ---~~~~~~~~~~--~~g~Dvvid~~g  306 (362)
                         ++.+.+....  -+++|++|+|+|
T Consensus        88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg  114 (291)
T 1e7w_A           88 LFTRCAELVAACYTHWGRCDVLVNNAS  114 (291)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence               3444333321  146999999987

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.92  E-value=3.5e-05  Score=69.66  Aligned_cols=106  Identities=18%  Similarity=0.259  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cCC---c-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LGV---D-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g~---~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+. +   .+.   . .+  .|..+ +++.+.+....  -
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999889999999999987766543 2   232   2 22  24333 22333333221  1


Q ss_pred             CceeEEEECCCh----H--------------------------HHHHHHHHh-ccCCEEEEEcCcccccC
Q 018013          296 KGFDIIYESVGG----D--------------------------MFNLCLKAL-AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       296 ~g~Dvvid~~g~----~--------------------------~~~~~~~~l-~~~G~~v~~G~~~~~~~  334 (362)
                      +++|++|+++|.    .                          ..+.+++.+ +.+|+||.+++...+..
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  154 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ  154 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCC
Confidence            369999999872    0                          112333334 23599999998876554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.92  E-value=2e-05  Score=71.50  Aligned_cols=106  Identities=13%  Similarity=0.245  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-----------HHHHHHcCCcE-EE--eCCC-ccHHHHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-----------AQLLKELGVDR-VI--NYKA-EDIKTVFKEE  293 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-----------~~~l~~~g~~~-v~--~~~~-~~~~~~~~~~  293 (362)
                      .++++||+||++++|.++++.+...|++|++++++.++           .+.+++.+... .+  |..+ +++.+.+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            57899999999999999999998999999999987652           23334455532 22  4333 2233333322


Q ss_pred             C--CCceeEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          294 F--PKGFDIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       294 ~--~~g~Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      .  -+++|++++|+|.           +.               .+.+++.|+  ..|+||.+++......
T Consensus        88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  158 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP  158 (285)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC
Confidence            1  1369999999882           11               122333443  3589999998766544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.92  E-value=4.2e-05  Score=68.14  Aligned_cols=106  Identities=17%  Similarity=0.234  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|+++++ +.++.+.+    ++.+.. .++  |..+ +++.+.+....  -++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999988889999999998 76655443    223443 222  3333 22333333221  136


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|.           +               ..+.+++.+..   .|+||.+++.....+
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~  151 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP  151 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC
Confidence            9999999872           1               12234444543   689999999876554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.92  E-value=4.3e-05  Score=68.98  Aligned_cols=104  Identities=23%  Similarity=0.249  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC-c--EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV-D--RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~-~--~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+.+.    +.+. .  .+  .|..+ +++.+.+....  -+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999889999999999887765543    3342 1  22  23333 22333332221  14


Q ss_pred             ceeEEEECCCh-----------HH---------------HHHHHHHhcc----CCEEEEEcCcccc
Q 018013          297 GFDIIYESVGG-----------DM---------------FNLCLKALAV----YGRLIVIGMISQY  332 (362)
Q Consensus       297 g~Dvvid~~g~-----------~~---------------~~~~~~~l~~----~G~~v~~G~~~~~  332 (362)
                      ++|++|+++|.           +.               .+.+++.++.    +|+||.+++...+
T Consensus       111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~  176 (279)
T 1xg5_A          111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH  176 (279)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhc
Confidence            69999999872           00               3445555543    3899999998765

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.91  E-value=4.1e-05  Score=68.60  Aligned_cols=107  Identities=24%  Similarity=0.253  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCH---hHHHHHHH-cCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGE---HKAQLLKE-LGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~---~~~~~l~~-~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+  |++|.++++.+...|++|+++++++   +..+.+.+ .+...+  .|..+ +++.+.+....  -++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999998  9999999999988999999999876   33333432 333223  34444 23334443332  246


Q ss_pred             eeEEEECCChH-------------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGGD-------------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~~-------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+++|..                               ..+.+++.+.++|+||.+++...+.+.
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  156 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI  156 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC
Confidence            99999998720                               011233344457999999987766553

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.91  E-value=3.4e-05  Score=68.84  Aligned_cols=106  Identities=17%  Similarity=0.201  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH--HHHHH-H---cCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK--AQLLK-E---LGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~--~~~l~-~---~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +++++|+||+|++|.++++.+...|++|++++++.++  .+.+. +   .+.. ..  .|..+ +++.+.+....  -++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6799999999999999998888889999999998776  44332 2   2433 22  24333 22333333221  136


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc--cC-CEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA--VY-GRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~-G~~v~~G~~~~~~~~  335 (362)
                      +|++|+++|.           +               ..+.+++.|.  .. |+||.+++.....+.
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  148 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF  148 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC
Confidence            9999999872           1               1233444443  23 899999998775543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.91  E-value=6.9e-05  Score=67.74  Aligned_cols=105  Identities=15%  Similarity=0.190  Sum_probs=70.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC------------HhHHHHH----HHcCCcE-E--EeCCC-ccHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG------------EHKAQLL----KELGVDR-V--INYKA-EDIK  287 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~------------~~~~~~l----~~~g~~~-v--~~~~~-~~~~  287 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++            .++.+.+    +..+... .  .|..+ +++.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            357899999999999999999999999999999876            4444433    3344432 2  23333 2233


Q ss_pred             HHHHHHC--CCceeEEEECCCh---------H---------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          288 TVFKEEF--PKGFDIIYESVGG---------D---------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       288 ~~~~~~~--~~g~Dvvid~~g~---------~---------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      +.+....  -+++|++++|+|.         +               ..+.+++.+..+|+||.+++....
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  158 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGL  158 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhc
Confidence            3333221  1469999999882         1               123344556678999999987654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.91  E-value=3.6e-05  Score=69.34  Aligned_cols=78  Identities=18%  Similarity=0.140  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHHH-Hc----CCc-EE--EeCCCc-----cHHHHHHHHC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLLK-EL----GVD-RV--INYKAE-----DIKTVFKEEF  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l~-~~----g~~-~v--~~~~~~-----~~~~~~~~~~  294 (362)
                      .++++||+||+|++|.++++.+...|++|+++++ ++++.+.+. ++    +.. ..  .|..+.     ++.+.+....
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4789999999999999999999899999999999 877665543 22    543 22  244333     2333332221


Q ss_pred             --CCceeEEEECCC
Q 018013          295 --PKGFDIIYESVG  306 (362)
Q Consensus       295 --~~g~Dvvid~~g  306 (362)
                        -+++|++|+++|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence              136999999988

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.90  E-value=4.5e-05  Score=67.80  Aligned_cols=107  Identities=21%  Similarity=0.189  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCH--hHHHHHHHc--CCc-EE--EeCCCc--cHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGE--HKAQLLKEL--GVD-RV--INYKAE--DIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~--~~~~~l~~~--g~~-~v--~~~~~~--~~~~~~~~~~--~~  296 (362)
                      .+++++|+||+|++|.++++.+...|++ |++++++.  +..+.+.+.  +.. .+  .|..+.  ++.+.+....  -+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999996 99888875  334444433  222 22  344433  3333333221  14


Q ss_pred             ceeEEEECCCh---H---------------HHHHHHHHhcc-----CCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG---D---------------MFNLCLKALAV-----YGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~---~---------------~~~~~~~~l~~-----~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|+++|.   +               ..+.+++.+.+     +|+||.+++...+.+.
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  145 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI  145 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC
Confidence            69999999982   1               23344555533     5899999998876554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.90  E-value=3.6e-05  Score=69.31  Aligned_cols=106  Identities=27%  Similarity=0.324  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEE--eCCC-ccHHHHHHHHC--CCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVI--NYKA-EDIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~--~~~~-~~~~~~~~~~~--~~g~Dvvi  302 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+. ++.....+  |..+ +++.+.++...  -+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999999999999999988776664 33222222  3333 22333333221  14699999


Q ss_pred             ECCChH---------------------------HHHHHHHHhc-cCCEEEEEcCcccccC
Q 018013          303 ESVGGD---------------------------MFNLCLKALA-VYGRLIVIGMISQYQG  334 (362)
Q Consensus       303 d~~g~~---------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~  334 (362)
                      +++|..                           ..+.+++.++ ..|+||.+++.....+
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~  147 (270)
T 1yde_A           88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG  147 (270)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC
Confidence            998720                           1223344443 4799999998765433

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.90  E-value=6.1e-05  Score=68.06  Aligned_cols=107  Identities=20%  Similarity=0.229  Sum_probs=71.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.+.    +.+.. ..  .|..+ +++.+.+....  -++
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999887765543    33432 22  24433 22333333221  136


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~  334 (362)
                      +|++++++|.           +               ..+.+++.+.+   +|+||.+++......
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~  175 (276)
T 3r1i_A          110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII  175 (276)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc
Confidence            9999999872           1               12234444433   489999998776543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.90  E-value=2.4e-05  Score=72.34  Aligned_cols=79  Identities=25%  Similarity=0.371  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC----------HhHHHH----HHHcCCcEEE---eCCC-ccHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG----------EHKAQL----LKELGVDRVI---NYKA-EDIKTV  289 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~----------~~~~~~----l~~~g~~~v~---~~~~-~~~~~~  289 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++          .++.+.    +++.+....+   |..+ +++.+.
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            457899999999999999999988899999999876          344333    3344544332   2222 223333


Q ss_pred             HHHHC--CCceeEEEECCC
Q 018013          290 FKEEF--PKGFDIIYESVG  306 (362)
Q Consensus       290 ~~~~~--~~g~Dvvid~~g  306 (362)
                      +....  -+++|++|+++|
T Consensus       105 ~~~~~~~~g~iD~lv~nAg  123 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            32221  136999999998

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.89  E-value=3.8e-05  Score=68.83  Aligned_cols=105  Identities=24%  Similarity=0.340  Sum_probs=69.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH----HHcCCcE-E--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL----KELGVDR-V--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.++++||+||+|++|.++++.+...|++|+++++ +.++.+.+    ++.+... +  .|..+ +++.+.+....  -+
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999998 66655443    3345442 2  23333 22333333221  13


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      ++|++|+++|.           +               ..+.+++.++++|+||.+++...+
T Consensus        99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~  160 (274)
T 1ja9_A           99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV  160 (274)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhc
Confidence            69999999872           1               112234455556999999998776

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.88  E-value=5.9e-05  Score=66.80  Aligned_cols=107  Identities=17%  Similarity=0.123  Sum_probs=71.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE--E--EeCCCc-cHHHHHHHHC-CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR--V--INYKAE-DIKTVFKEEF-PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~--v--~~~~~~-~~~~~~~~~~-~~g~Dv  300 (362)
                      -.+++++|+||+|++|.++++.+...|++|++++++.++.+.+. +++...  .  .|..+. ++.+.+.... -+++|+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            35789999999999999999999989999999999988766553 444332  2  233332 2333222211 246999


Q ss_pred             EEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          301 IYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       301 vid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|+++|.           +.               .+.+++.++  ..|+||.+++...+..
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  150 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIV  150 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccC
Confidence            9999872           11               223344443  3689999998876554

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.88  E-value=5.8e-05  Score=67.84  Aligned_cols=107  Identities=20%  Similarity=0.340  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC--c-EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV--D-RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~--~-~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+.+. +++.  . .+  .|..+ +++.+.+....  -+++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999998889999999999877665443 3432  1 22  23333 22333332221  14699


Q ss_pred             EEEECCCh-------------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          300 IIYESVGG-------------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~-------------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|+++|.             +               ..+.+++.+.  ..|+||.+++...+...
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  160 (278)
T 2bgk_A           95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG  160 (278)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC
T ss_pred             EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC
Confidence            99999872             1               1223444443  36899999998776553

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.88  E-value=2.7e-05  Score=69.14  Aligned_cols=103  Identities=17%  Similarity=0.234  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcE-EEeCCC-ccHHHHHHHHC--CCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDR-VINYKA-EDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~-v~~~~~-~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.+.    ++.++.. ..|..+ +++.+.++...  -+++|++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~   81 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNA   81 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999999999999999999987652    2234321 234444 23333333221  2469999999


Q ss_pred             CCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          305 VGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|.           +               ..+.+++.|+  ..|+||.+++...+.+.
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  140 (250)
T 2fwm_X           82 AGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR  140 (250)
T ss_dssp             CCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC
Confidence            872           1               1223444443  36999999998776553

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.87  E-value=3.2e-05  Score=68.51  Aligned_cols=107  Identities=23%  Similarity=0.323  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|+++++ +.++.+.+    ++.+... .+  |..+ +++.+.+.+..  -++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999988876 44544433    3345542 22  3333 22333333221  146


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|.           +               ..+.+++.+  +..|+||.+++.....+.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  148 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN  148 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC
Confidence            9999999872           1               122344444  356899999987765554

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.87  E-value=6.6e-05  Score=69.61  Aligned_cols=78  Identities=14%  Similarity=0.089  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHHH-----HcCCc-EE--EeCCC-c--------------
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLLK-----ELGVD-RV--INYKA-E--------------  284 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l~-----~~g~~-~v--~~~~~-~--------------  284 (362)
                      .++++||+||+|++|.++++.+...|++|++++ ++.++.+.+.     +.+.. .+  .|..+ +              
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~  124 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT  124 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence            578999999999999999999999999999999 8887765543     23432 22  34333 2              


Q ss_pred             ---cHHHHHHHHC--CCceeEEEECCC
Q 018013          285 ---DIKTVFKEEF--PKGFDIIYESVG  306 (362)
Q Consensus       285 ---~~~~~~~~~~--~~g~Dvvid~~g  306 (362)
                         ++.+.+....  -+++|++|+++|
T Consensus       125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG  151 (328)
T 2qhx_A          125 LFTRCAELVAACYTHWGRCDVLVNNAS  151 (328)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence               3433333221  146999999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.87  E-value=0.00011  Score=65.15  Aligned_cols=107  Identities=17%  Similarity=0.162  Sum_probs=68.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.++++||+||++++|.++++.+...|++|++++++.++.+.+.    +.+.. ..+  |..+ +++.+.+....  -++
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999988776653    23433 222  3333 22333332221  136


Q ss_pred             eeEEEECCCh--------------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG--------------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~--------------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|-              +               ..+.+++.+.  .+|+||.+++...+..
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  154 (253)
T 3qiv_A           87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY  154 (253)
T ss_dssp             CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------
T ss_pred             CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC
Confidence            9999999873              0               1223444443  4689999999887644

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.87  E-value=3.1e-05  Score=69.87  Aligned_cols=106  Identities=19%  Similarity=0.178  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHh---HHHHHHH-cCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEH---KAQLLKE-LGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~---~~~~l~~-~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+  |++|.++++.+...|++|++++++++   ..+.+.+ .+...+  .|..+ +++.+.+....  -++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999998  99999999999989999999998765   3344432 342222  34444 22333333221  246


Q ss_pred             eeEEEECCCh-----------H-------------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D-------------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~-------------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +|++++++|.           +                   ..+.+++.|+++|+||.+++.....+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  151 (275)
T 2pd4_A           85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY  151 (275)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC
Confidence            9999999872           0                   11233344555799999998776554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.86  E-value=7.9e-05  Score=67.26  Aligned_cols=78  Identities=21%  Similarity=0.267  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.. ..  .|..+ +++.+.+....  -+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999887765442    23543 22  23333 22333333221  2469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++|+++|
T Consensus       101 D~lv~~Ag  108 (277)
T 2rhc_B          101 DVLVNNAG  108 (277)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.86  E-value=0.00041  Score=63.16  Aligned_cols=93  Identities=13%  Similarity=0.147  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|+|.| .|.+|..+++.++..|++|++++++.++.+.++++|+.. ++.  .++.+.+     .+.|+|++++..
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~--~~l~~~l-----~~aDvVi~~~p~  223 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHI--SKAAQEL-----RDVDVCINTIPA  223 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEG--GGHHHHT-----TTCSEEEECCSS
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cCh--hhHHHHh-----cCCCEEEECCCh
Confidence            5789999999 799999999999999999999999988877777788753 222  2333322     458999999875


Q ss_pred             HH-HHHHHHHhccCCEEEEEcCc
Q 018013          308 DM-FNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 ~~-~~~~~~~l~~~G~~v~~G~~  329 (362)
                      .. -...++.+++++.+|.++..
T Consensus       224 ~~i~~~~l~~mk~~~~lin~ar~  246 (293)
T 3d4o_A          224 LVVTANVLAEMPSHTFVIDLASK  246 (293)
T ss_dssp             CCBCHHHHHHSCTTCEEEECSST
T ss_pred             HHhCHHHHHhcCCCCEEEEecCC
Confidence            32 23567889999999999863

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.85  E-value=9.8e-05  Score=63.66  Aligned_cols=93  Identities=17%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh---
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG---  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~---  307 (362)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+. .++..+ .|..+.+. +.   .  .++|+||+++|.   
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~~---~--~~~d~vi~~ag~~~~   74 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-SD---L--SDQNVVVDAYGISPD   74 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-HH---H--TTCSEEEECCCSSTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-hh---h--cCCCEEEECCcCCcc
Confidence            6999999999999999999999999999999988776554 344322 23333333 22   2  468999999984   


Q ss_pred             ------HHHHHHHHHhccC--CEEEEEcCccc
Q 018013          308 ------DMFNLCLKALAVY--GRLIVIGMISQ  331 (362)
Q Consensus       308 ------~~~~~~~~~l~~~--G~~v~~G~~~~  331 (362)
                            ......++.++..  ++||.+++...
T Consensus        75 ~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~  106 (221)
T 3ew7_A           75 EAEKHVTSLDHLISVLNGTVSPRLLVVGGAAS  106 (221)
T ss_dssp             TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-
T ss_pred             ccchHHHHHHHHHHHHHhcCCceEEEEecceE
Confidence                  2345666777654  79999988765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.85  E-value=8.4e-05  Score=66.46  Aligned_cols=109  Identities=24%  Similarity=0.342  Sum_probs=71.9

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H---cC-Cc-EE--EeCCC-ccHHHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAG-GTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E---LG-VD-RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g-~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~---~g-~~-~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      -.++++||+||+| |+|.++++.+...|++|++++++.++.+.+. +   .+ .. ++  .|..+ +++.+.+....  -
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            3578999999975 8999999998889999999999988766543 2   22 22 22  23333 22333333221  1


Q ss_pred             CceeEEEECCCh-----------H---------------HHHHHHHHhc---cCCEEEEEcCcccccCCC
Q 018013          296 KGFDIIYESVGG-----------D---------------MFNLCLKALA---VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       296 ~g~Dvvid~~g~-----------~---------------~~~~~~~~l~---~~G~~v~~G~~~~~~~~~  336 (362)
                      +++|++|+++|-           +               ..+.+++.+.   .+|+||.+++...+....
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  169 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH  169 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC
Confidence            369999999882           1               1223444453   568999999887765543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.85  E-value=1.9e-05  Score=74.31  Aligned_cols=101  Identities=16%  Similarity=0.170  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE-e--------CCC---cc-H---HHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI-N--------YKA---ED-I---KTVFKE  292 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~-~--------~~~---~~-~---~~~~~~  292 (362)
                      ++.+|+|+| .|.+|+.+++.++.+|++|++++++.++.+.++++|++.+. +        +..   +. .   .+.+.+
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            689999999 69999999999999999999999999999999999986431 1        000   00 0   011111


Q ss_pred             HCCCceeEEEECCC--h----H-HHHHHHHHhccCCEEEEEcCccc
Q 018013          293 EFPKGFDIIYESVG--G----D-MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       293 ~~~~g~Dvvid~~g--~----~-~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      . -.+.|+||.++.  +    . ..+..++.|++++.+|.++.-.+
T Consensus       262 ~-l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~G  306 (381)
T 3p2y_A          262 A-ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETG  306 (381)
T ss_dssp             H-HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGT
T ss_pred             H-HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCC
Confidence            1 156999999863  1    1 34788999999999999987544

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.85  E-value=4.7e-05  Score=68.08  Aligned_cols=106  Identities=22%  Similarity=0.243  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHh---HHHHHHH-cCCcEEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEH---KAQLLKE-LGVDRVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~---~~~~l~~-~g~~~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+  |++|.++++.+...|++|++++++++   ..+.+.+ .+....+  |..+ +++.+.++...  -++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999998  99999999888888999999998765   3333432 3432333  4333 22333333221  146


Q ss_pred             eeEEEECCChH---------------HH---------------HHHHHHhccCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD---------------MF---------------NLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +|++++++|..               .+               +.+++.++++|+||.+++......
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  153 (261)
T 2wyu_A           87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV  153 (261)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC
Confidence            99999998720               11               122333444699999998776554

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.85  E-value=4.3e-05  Score=67.68  Aligned_cols=107  Identities=19%  Similarity=0.253  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .++++||+||+|++|..+++.+...|++|++++++.++.+.+.    +.+.. ..  .|..+ +++.+.+....  .+++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999889999999999887665442    23433 22  23333 22333332211  1369


Q ss_pred             eEEEECCChH-------------------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGGD-------------------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      |++|+++|..                         ..+.+++.++  ..|+||.+++...+.+.
T Consensus        90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~  153 (255)
T 1fmc_A           90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN  153 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC
Confidence            9999998720                         1233344443  35899999988776553

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.85  E-value=0.0001  Score=67.13  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC-c-EE--EeCCCc-c-HHHHHHHHC--C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV-D-RV--INYKAE-D-IKTVFKEEF--P  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~-~-~v--~~~~~~-~-~~~~~~~~~--~  295 (362)
                      ..++++||+||++++|.++++.+...|++|++++++.++.+.+.    +.+. . .+  .|..+. + +........  .
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            45789999999999999999998889999999999988765442    2232 2 22  344443 2 222222221  1


Q ss_pred             CceeEEEECCC
Q 018013          296 KGFDIIYESVG  306 (362)
Q Consensus       296 ~g~Dvvid~~g  306 (362)
                      +++|++|+++|
T Consensus        90 g~iD~lv~nAg  100 (311)
T 3o26_A           90 GKLDILVNNAG  100 (311)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            46999999998

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.85  E-value=0.00013  Score=65.81  Aligned_cols=106  Identities=16%  Similarity=0.254  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH-------H----HHHHHcCCcE-E--EeCCC-ccHHHHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK-------A----QLLKELGVDR-V--INYKA-EDIKTVFKEE  293 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~-------~----~~l~~~g~~~-v--~~~~~-~~~~~~~~~~  293 (362)
                      .|++++|+||++++|.++++.+...|++|++++++.++       .    +.+++.+... .  .|..+ +++.+.+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            57899999999999999999998999999999987542       2    2223345432 2  24333 2233333322


Q ss_pred             C--CCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          294 F--PKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       294 ~--~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      .  -+++|++++|+|.           +               ..+.+++.|.  .+|+||.+++......
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  155 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNP  155 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCH
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCC
Confidence            1  1469999999982           1               2234455553  4689999988766443

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.84  E-value=1e-05  Score=71.82  Aligned_cols=103  Identities=21%  Similarity=0.315  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-cHHHHHHHHC--CCceeEEEEC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE-DIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      -.+++++|+||+|++|.++++.+...|++|++++++.++.+.+.  +  ...|..+. ++.+.+....  -+++|+++++
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            35789999999999999999999899999999998765433221  1  23344442 2333333221  1469999999


Q ss_pred             CCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          305 VGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|.           +               ..+.+++.|+  ..|+||.+++.....+
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  146 (247)
T 1uzm_A           89 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG  146 (247)
T ss_dssp             CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC
Confidence            872           0               1233444443  3489999998876544

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.84  E-value=2.9e-05  Score=69.88  Aligned_cols=108  Identities=22%  Similarity=0.310  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      -.+++++|+||+|++|.++++.+...|++|++++++ +++.+.+    ++.+.. .++  |..+ +++.+.+++..  .+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999988999999999984 4443333    344543 233  3333 22333333221  24


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|+++|.           +               ..+.+++.++  ..|+||.+++.....+.
T Consensus       107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  173 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN  173 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC
Confidence            69999999882           1               1223444443  34899999987765553

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.84  E-value=0.00011  Score=63.53  Aligned_cols=94  Identities=18%  Similarity=0.088  Sum_probs=67.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh---
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG---  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~---  307 (362)
                      +|||+||+|.+|..+++.+...|.+|+++++++++...+...++..+ .|..+.+. +.   .  .++|+||+++|.   
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~---~--~~~d~vi~~ag~~~~   75 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-AD---L--DSVDAVVDALSVPWG   75 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HH---H--TTCSEEEECCCCCTT
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-hh---c--ccCCEEEECCccCCC
Confidence            69999999999999999999899999999999888776644455432 24333333 21   2  468999999974   


Q ss_pred             --------HHHHHHHHHhcc-CCEEEEEcCccc
Q 018013          308 --------DMFNLCLKALAV-YGRLIVIGMISQ  331 (362)
Q Consensus       308 --------~~~~~~~~~l~~-~G~~v~~G~~~~  331 (362)
                              ......++.++. +++||.+++.+.
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  108 (224)
T 3h2s_A           76 SGRGYLHLDFATHLVSLLRNSDTLAVFILGSAS  108 (224)
T ss_dssp             SSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGG
T ss_pred             cchhhHHHHHHHHHHHHHHHcCCcEEEEeccee
Confidence                    123445555543 479999987654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.83  E-value=3.6e-05  Score=72.98  Aligned_cols=99  Identities=19%  Similarity=0.201  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEe-------------CCC---ccH----HH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN-------------YKA---EDI----KT  288 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~-------------~~~---~~~----~~  288 (362)
                      ++.+|+|+| +|.+|+.++++++.+|++|+++++++++.+.++++|++.+..             +..   +++    ..
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            678999999 699999999999999999999999999999999998863321             110   000    01


Q ss_pred             HHHHHCCCceeEEEECCC--h-----HHHHHHHHHhccCCEEEEEcCc
Q 018013          289 VFKEEFPKGFDIIYESVG--G-----DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~g--~-----~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      .+.+. -.+.|+||.|+.  +     -..+..++.|+++..+|.++.-
T Consensus       268 ~l~e~-l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          268 LVAEH-IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             HHHHH-HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHH-hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence            11111 146899999963  1     1346889999999999999863

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.83  E-value=4.1e-05  Score=68.67  Aligned_cols=102  Identities=15%  Similarity=0.143  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHC--CCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      .++++||+||+|++|.++++.+...|++|+++++++++     ...+. ...|..+ +++.+.+....  -+++|++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~   81 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNN   81 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            47899999999999999999999999999999987654     11121 1234443 22333333221  1369999999


Q ss_pred             CCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          305 VGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      +|.           +               ..+.+++.+.+  .|+||.+++...+...
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  140 (264)
T 2dtx_A           82 AGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT  140 (264)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC
Confidence            872           0               13344555543  5899999998776553

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.83  E-value=3e-05  Score=68.96  Aligned_cols=110  Identities=25%  Similarity=0.369  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHH----HHHHHcCCc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKA----QLLKELGVD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~----~~l~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      .++++|||+||+|++|.++++.+...|++|++++ ++.++.    +.+++.+.. ..+  |..+ +++.+.+....  -+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            6789999999999999999999889999999887 433332    233444543 222  3333 22333333221  24


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~  337 (362)
                      ++|++++++|.           +               ..+.+++.+.  ..|+||.+++.....+...
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG  159 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC
Confidence            69999999872           1               1233444443  3489999999887666443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.83  E-value=6.6e-05  Score=69.52  Aligned_cols=105  Identities=21%  Similarity=0.307  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-----HhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-----EHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF-  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-----~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~-  294 (362)
                      .++++||+||+|++|.++++.+...|++|++++++     .++.+.+.    +.+.. ..  .|..+ +++.+.++... 
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999987764     34444432    34443 22  23333 23333333321 


Q ss_pred             -CCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCccccc
Q 018013          295 -PKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQ  333 (362)
Q Consensus       295 -~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~  333 (362)
                       -+++|++++++|.           +               ..+.++..|+  ..|+||.+++.....
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~  151 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG  151 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhcc
Confidence             1469999999982           1               1234445554  468999999987753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.82  E-value=5.3e-05  Score=67.59  Aligned_cols=79  Identities=18%  Similarity=0.190  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      -.+++++|+||+|++|.++++.+...|++|++++++.++.+.+ ++++.. .+  .|..+ +++.+.+....  -+++|+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            3578999999999999999999999999999999987766554 345543 22  23333 22333333221  136999


Q ss_pred             EEECCC
Q 018013          301 IYESVG  306 (362)
Q Consensus       301 vid~~g  306 (362)
                      +|+++|
T Consensus        90 li~~Ag   95 (265)
T 2o23_A           90 AVNCAG   95 (265)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.82  E-value=9.4e-05  Score=65.88  Aligned_cols=106  Identities=22%  Similarity=0.185  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-c---C-------C-cEEE--eCCC-ccHHHHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-L---G-------V-DRVI--NYKA-EDIKTVFKEE  293 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~---g-------~-~~v~--~~~~-~~~~~~~~~~  293 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+.+ +   +       . -.++  |..+ +++.+.++..
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999988899999999999887665532 2   2       1 1222  3333 2233333222


Q ss_pred             C--CCce-eEEEECCCh-----------H---------------HHHHHHHHhcc---CCEEEEEcCcccccC
Q 018013          294 F--PKGF-DIIYESVGG-----------D---------------MFNLCLKALAV---YGRLIVIGMISQYQG  334 (362)
Q Consensus       294 ~--~~g~-Dvvid~~g~-----------~---------------~~~~~~~~l~~---~G~~v~~G~~~~~~~  334 (362)
                      .  -+++ |++|+++|.           +               ..+.+.+.+.+   .|+||.+++.....+
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence            1  1346 999999872           1               12233444433   579999998765443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.82  E-value=0.00014  Score=65.39  Aligned_cols=107  Identities=19%  Similarity=0.207  Sum_probs=70.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+.. .+  .|..+ +++.+.+....  -++
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            46789999999999999999999999999999999887765542    33443 22  23333 22333333221  246


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|.           +.               .+.+++.+.  ..|+||.+++...+.+
T Consensus       109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  173 (272)
T 1yb1_A          109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS  173 (272)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC
T ss_pred             CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC
Confidence            9999999872           11               223444443  3589999998876544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.82  E-value=3.1e-05  Score=68.51  Aligned_cols=103  Identities=21%  Similarity=0.116  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHH-----H-HC-CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFK-----E-EF-PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~-----~-~~-~~g~Dvv  301 (362)
                      .++++||+||+|++|.++++.+.. |++|+++++++++.+.+.+..-...+..   ++.+...     . .. -+++|++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~---D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIES---DIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEEC---CHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceec---ccchHHHHHHHHHHHHhcCCCCEE
Confidence            478999999999999998887755 9999999999888877766322222222   2211110     0 11 1469999


Q ss_pred             EECCChH--------------------------HHHHHHHHhc-cCCEEEEEcCcccccCC
Q 018013          302 YESVGGD--------------------------MFNLCLKALA-VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~  335 (362)
                      ++++|..                          ..+.++..++ .+|+||.+++...+.+.
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  140 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPH  140 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCC
Confidence            9999831                          1223444443 46999999998776654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.82  E-value=3.2e-06  Score=76.16  Aligned_cols=105  Identities=19%  Similarity=0.159  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-cHHHHHHHHC--CCceeEEEEC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE-DIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      -.|+++||+||++++|.++++.+...|++|++++++.++.+.....    ..|..+. ++.+.+....  -+++|+++++
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            4689999999999999999999989999999999876543211000    1122221 2222222211  1469999999


Q ss_pred             CCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          305 VGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      +|.           +               ..+.+++.|+.  .|+||.+++...+.+..
T Consensus       102 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  161 (266)
T 3uxy_A          102 AGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGP  161 (266)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCT
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC
Confidence            882           1               12234444443  78999999988766543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.82  E-value=9.5e-05  Score=66.96  Aligned_cols=107  Identities=22%  Similarity=0.273  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc--EEE--eCCCc-cHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD--RVI--NYKAE-DIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~--~v~--~~~~~-~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+..  .++  |..+. ++.+.+....  -++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999998889999999999988766543    33432  222  33332 2333332221  146


Q ss_pred             eeEEEEC-CCh----------H---------------HHHHHHHHhc-cCCEEEEEcCcccccCC
Q 018013          298 FDIIYES-VGG----------D---------------MFNLCLKALA-VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~-~g~----------~---------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|++ .|.          +               ..+.+++.++ .+|+||.+++.....+.
T Consensus       107 iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (286)
T 1xu9_A          107 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY  171 (286)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC
T ss_pred             CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC
Confidence            9999999 441          1               1223344443 46999999998776553

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.80  E-value=0.0001  Score=66.44  Aligned_cols=105  Identities=19%  Similarity=0.208  Sum_probs=70.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC--c-EE--EeCCCc-cHHHHHHHHC--CCceeEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV--D-RV--INYKAE-DIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~--~-~v--~~~~~~-~~~~~~~~~~--~~g~Dvv  301 (362)
                      +++||+||+|++|.++++.+...|++|+++++++++.+.+. ++..  . ..  .|..+. ++.+.+....  -+++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            78999999999999999999999999999999988776654 3321  1 22  233332 2333333321  1468999


Q ss_pred             EECCCh------------H---------------HHHHHHHHhcc--CC-EEEEEcCcccccCC
Q 018013          302 YESVGG------------D---------------MFNLCLKALAV--YG-RLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~------------~---------------~~~~~~~~l~~--~G-~~v~~G~~~~~~~~  335 (362)
                      |+++|.            +               ..+.+++.|..  .| +||.+++...+.+.
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~  165 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY  165 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC
Confidence            999872            0               12234444432  47 99999998776543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.80  E-value=6.3e-05  Score=69.50  Aligned_cols=107  Identities=25%  Similarity=0.326  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec---------CCHhHHHHH----HHcCCcEEEeCCCc-cHHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC---------GGEHKAQLL----KELGVDRVINYKAE-DIKTVFKEE  293 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~---------~~~~~~~~l----~~~g~~~v~~~~~~-~~~~~~~~~  293 (362)
                      -.|++++|+||+|++|.++++.+...|++|++++         ++.++.+.+    +..+...+.|..+. ++.+.+...
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            3578999999999999999999988999999964         344444333    33455555666653 333333322


Q ss_pred             --CCCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          294 --FPKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       294 --~~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                        .-+++|++|+++|.           +               ..+.+++.|+  ..|+||.+++.....+
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~  157 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG  157 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC
Confidence              12469999999872           1               1233444443  3589999998765433

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.80  E-value=0.00014  Score=65.81  Aligned_cols=107  Identities=20%  Similarity=0.180  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHh---HHHHHHH-cCCcEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEH---KAQLLKE-LGVDRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~---~~~~l~~-~g~~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .++++||+||+  |++|.++++.+...|++|++++++.+   ..+.+.+ .+....  .|..+ +++.+.+....  -++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  89999999998889999999998764   3333332 342222  34444 22333333221  246


Q ss_pred             eeEEEECCCh---------------HH---------------HHHHHHHhc-cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG---------------DM---------------FNLCLKALA-VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~---------------~~---------------~~~~~~~l~-~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+++|.               +.               .+.+++.+. .+|+||.+++.....+.
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  168 (285)
T 2p91_A          100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV  168 (285)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC
Confidence            9999999872               01               112333343 46999999987765543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.80  E-value=3.6e-05  Score=65.78  Aligned_cols=90  Identities=17%  Similarity=0.210  Sum_probs=60.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCCh---
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGG---  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~---  307 (362)
                      +++|+||+|++|..+++.+. .|++|++++++.+          ....|..+ +++.+.+...  +++|++|+++|.   
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag~~~~   71 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATGSATF   71 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCCCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCCCCCC
Confidence            79999999999999998888 8999999998754          12334444 2333444433  469999999871   


Q ss_pred             --------HHHH-----------HHHH----HhccCCEEEEEcCcccccC
Q 018013          308 --------DMFN-----------LCLK----ALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       308 --------~~~~-----------~~~~----~l~~~G~~v~~G~~~~~~~  334 (362)
                              +.+.           ...+    .++++|+||.+++...+.+
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~  121 (202)
T 3d7l_A           72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP  121 (202)
T ss_dssp             CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC
T ss_pred             CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC
Confidence                    1111           1222    2333689999988766554

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.79  E-value=8.3e-05  Score=67.75  Aligned_cols=106  Identities=16%  Similarity=0.183  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc----CCc-EE--EeCCC-ccHHHHHHHH--CCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL----GVD-RV--INYKA-EDIKTVFKEE--FPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~----g~~-~v--~~~~~-~~~~~~~~~~--~~~g  297 (362)
                      .+++++|+||+|++|.+++..+...|++|++++++.++.+.+. ++    +.. .+  .|..+ +++.+.+...  .-+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999887765442 22    543 22  23333 2233333222  1246


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc---cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA---VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~---~~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|.           +               ..+.+++.+.   ..|+||.+++...+.+
T Consensus       105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~  170 (302)
T 1w6u_A          105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG  170 (302)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC
Confidence            9999999872           1               1123344443   3589999988766544

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.79  E-value=7.4e-05  Score=67.51  Aligned_cols=108  Identities=18%  Similarity=0.199  Sum_probs=71.8

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCH--hHHHHHHH-cCCcEEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGE--HKAQLLKE-LGVDRVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l~~-~g~~~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.+++++|+||+  +|+|.++++.+...|++|++++++.  ++.+.+.+ .+-...+  |..+ +++.+.+....  -++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            467999999988  6699999999989999999999876  55555543 3332333  3333 23333333221  246


Q ss_pred             eeEEEECCChH-------------------------------HHHHHHHHhc-cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGGD-------------------------------MFNLCLKALA-VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~~-------------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+|+|..                               ..+.++..+. .+|+||.+++.....+.
T Consensus       104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  173 (280)
T 3nrc_A          104 LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM  173 (280)
T ss_dssp             CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC
T ss_pred             CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC
Confidence            99999998720                               1223344444 57999999998776654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.79  E-value=9.8e-05  Score=65.79  Aligned_cols=107  Identities=15%  Similarity=0.217  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEecCCHhHHHHHH-Hc-----CCc-EE--EeCCC-ccHHHHHHHH--
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKL---AGNTVVATCGGEHKAQLLK-EL-----GVD-RV--INYKA-EDIKTVFKEE--  293 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~---~G~~Vi~~~~~~~~~~~l~-~~-----g~~-~v--~~~~~-~~~~~~~~~~--  293 (362)
                      .+++++|+||+|++|.++++.+..   .|++|+++++++++.+.+. ++     +.. ..  .|..+ +++.+.+...  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            478999999999999998888777   8999999999987766553 22     432 22  24333 2333444333  


Q ss_pred             --CCCcee--EEEECCCh--------------HH---------------HHHHHHHhcc----CCEEEEEcCcccccCC
Q 018013          294 --FPKGFD--IIYESVGG--------------DM---------------FNLCLKALAV----YGRLIVIGMISQYQGE  335 (362)
Q Consensus       294 --~~~g~D--vvid~~g~--------------~~---------------~~~~~~~l~~----~G~~v~~G~~~~~~~~  335 (362)
                        ..+++|  ++++++|.              +.               .+.+++.|.+    .|+||.+++...+.+.
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence              223577  99999762              10               1233444543    3899999998876553

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.79  E-value=0.00024  Score=63.26  Aligned_cols=78  Identities=19%  Similarity=0.238  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC---CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF---PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~---~~g  297 (362)
                      .++++||+||+|++|.++++.+...|++|++++++.++.+.+.    +.+.. ..  .|..+ +++.+.+....   .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999999887765542    23433 22  23333 23333333321   346


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++++++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999994

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.78  E-value=2.7e-05  Score=69.94  Aligned_cols=103  Identities=17%  Similarity=0.215  Sum_probs=68.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCCHhH-HHHHH-HcCCc---EEEeCCCc-cHHHHHHH---HCC--
Q 018013          229 SGKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGGEHK-AQLLK-ELGVD---RVINYKAE-DIKTVFKE---EFP--  295 (362)
Q Consensus       229 ~g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~~~~-~~~l~-~~g~~---~v~~~~~~-~~~~~~~~---~~~--  295 (362)
                      .+++++|+|+  +|++|.++++.+...|++|++++++.++ .+.+. +++..   ...|..+. ++.+.+..   ..+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999998  8999999999999999999999988765 34443 34432   22344442 23333332   222  


Q ss_pred             CceeEEEECCCh----------------H---------------HHHHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGG----------------D---------------MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~----------------~---------------~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +++|++|+|+|.                +               ..+.+++.+.++|+||.+++...
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~  152 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS  152 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc
Confidence            279999999872                0               11233444556799999987654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.78  E-value=6.9e-05  Score=61.46  Aligned_cols=96  Identities=19%  Similarity=0.189  Sum_probs=66.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .++++|+|.| +|.+|..+++.++..|.+|+++++++++.+.++ +.|...+ ..+..+. +.+......++|+||.+++
T Consensus        17 ~~~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~-~~d~~~~-~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           17 QKSKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTV-VGDAAEF-ETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEE-ESCTTSH-HHHHTTTGGGCSEEEECSS
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEE-EecCCCH-HHHHHcCcccCCEEEEEeC
Confidence            6789999999 699999999999999999999999998887776 6676533 3322222 2233222357999999999


Q ss_pred             hH-HHHHHHHHhcc-CC--EEEEE
Q 018013          307 GD-MFNLCLKALAV-YG--RLIVI  326 (362)
Q Consensus       307 ~~-~~~~~~~~l~~-~G--~~v~~  326 (362)
                      .+ ....+...++. +|  +++..
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~iv~~  117 (155)
T 2g1u_A           94 DDSTNFFISMNARYMFNVENVIAR  117 (155)
T ss_dssp             CHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred             CcHHHHHHHHHHHHHCCCCeEEEE
Confidence            64 33344444444 44  44443

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.78  E-value=9.6e-05  Score=70.29  Aligned_cols=103  Identities=18%  Similarity=0.153  Sum_probs=78.2

Q ss_pred             HHHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          217 TASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       217 tA~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ..+.++.+...  -.|++|+|.| .|.+|..+++.++.+|++|+++++++.+...+...|...      .++.+.+    
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v------~~Leeal----  273 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL------VKLNEVI----  273 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE------CCHHHHT----
T ss_pred             HHHHHHHHhhCceecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe------ccHHHHH----
Confidence            34455554433  6899999999 799999999999999999999999887766666667532      1233332    


Q ss_pred             CCceeEEEECCCh-HHHH-HHHHHhccCCEEEEEcCccc
Q 018013          295 PKGFDIIYESVGG-DMFN-LCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~-~~~~~l~~~G~~v~~G~~~~  331 (362)
                       .+.|+|+.|.|. ..+. ..++.|++++.++.+|....
T Consensus       274 -~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          274 -RQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             -TTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             -hcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence             358999999874 3443 78899999999999988654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.77  E-value=2.4e-05  Score=68.85  Aligned_cols=101  Identities=17%  Similarity=0.170  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .++|||+||+|++|.++++.+...| ++|+++++++++.+.+...++..+ .|..+  ..+.....  .++|+||++++.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~--~~~D~vv~~a~~   98 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLN--HAALKQAM--QGQDIVYANLTG   98 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTC--HHHHHHHH--TTCSEEEEECCS
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCC--HHHHHHHh--cCCCEEEEcCCC
Confidence            4689999999999999999999999 899999998876543322222221 23333  22221112  268999999885


Q ss_pred             H----HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          308 D----MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       308 ~----~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      .    ..+.+++.++..  ++||.+++...+..
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~  131 (236)
T 3qvo_A           99 EDLDIQANSVIAAMKACDVKRLIFVLSLGIYDE  131 (236)
T ss_dssp             TTHHHHHHHHHHHHHHTTCCEEEEECCCCC---
T ss_pred             CchhHHHHHHHHHHHHcCCCEEEEEecceecCC
Confidence            2    334556666543  69999999776554

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.77  E-value=9.9e-05  Score=65.57  Aligned_cols=106  Identities=19%  Similarity=0.190  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+    ++.+.. .+  .|..+ +++.+.++...  .+++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999988999999999987765443    233443 22  23333 22333333221  1469


Q ss_pred             eEEEECCChH---------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          299 DIIYESVGGD---------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~---------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      |++|+++|..                           ..+.+.+.+.  ..|+||.+++......
T Consensus        92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~  156 (260)
T 3awd_A           92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV  156 (260)
T ss_dssp             CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc
Confidence            9999998720                           1123333332  3689999998776544

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.77  E-value=8.2e-05  Score=65.48  Aligned_cols=106  Identities=14%  Similarity=0.178  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEecCCHhHHHHHH-H---cCCc-EEE--eCCC-ccHHHHHHHHC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN-------TVVATCGGEHKAQLLK-E---LGVD-RVI--NYKA-EDIKTVFKEEF  294 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~-------~Vi~~~~~~~~~~~l~-~---~g~~-~v~--~~~~-~~~~~~~~~~~  294 (362)
                      +++++|+||+|++|.++++.+...|+       +|++++++.++.+.+. +   .+.. .++  |..+ +++.+.+....
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            67899999999999999988888899       9999999887766553 2   2432 222  3333 22333333221


Q ss_pred             --CCceeEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          295 --PKGFDIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       295 --~~g~Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                        -+++|++|+++|.           +               ..+.+++.|  ...|+||.+++...+.+.
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF  152 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC
Confidence              2469999999872           1               112334444  246899999998776553

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.76  E-value=4e-05  Score=68.04  Aligned_cols=108  Identities=21%  Similarity=0.274  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHH---C--
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEE---F--  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~---~--  294 (362)
                      .+++++|+||++++|.++++.+...|++|+++ .++.++.+.+    ++.+.. ..+  |..+ +++...+...   .  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            57899999999999999999999999999886 5555444333    233433 222  3332 1222222211   1  


Q ss_pred             ---CCceeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccccCCC
Q 018013          295 ---PKGFDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       295 ---~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~  336 (362)
                         ...+|++++++|.           +               ..+.+++.++++|+||.+++.....+..
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~  156 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP  156 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC
Confidence               1359999999872           1               1123334456789999999988766543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.76  E-value=3.3e-05  Score=77.90  Aligned_cols=108  Identities=23%  Similarity=0.322  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC---------CHhHHHH----HHHcCCcEEEeCCC-ccHHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---------GEHKAQL----LKELGVDRVINYKA-EDIKTVFKEE  293 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---------~~~~~~~----l~~~g~~~v~~~~~-~~~~~~~~~~  293 (362)
                      -.|++++|+||++|+|.++++.+...|++|+++++         +.++.+.    +++.+...+.|..+ ++..+.++..
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            46899999999999999999998889999999876         4443333    34456666666665 3444444433


Q ss_pred             CC--CceeEEEECCCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          294 FP--KGFDIIYESVGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       294 ~~--~g~Dvvid~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      ..  +++|++|+|+|.           +               ..+.++..|+.  +|+||.+++.....+.
T Consensus        97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~  168 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN  168 (613)
T ss_dssp             --------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC
T ss_pred             HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence            22  469999999882           0               22345555644  4899999997765543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.74  E-value=4.4e-05  Score=68.02  Aligned_cols=76  Identities=18%  Similarity=0.197  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EE--EeCCC-ccHHHHHHHHC-CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RV--INYKA-EDIKTVFKEEF-PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v--~~~~~-~~~~~~~~~~~-~~g~Dvvid  303 (362)
                      .++++||+||++++|.++++.+...|++|++++++.++  ..++++.. ..  .|..+ +++.+.++... -+++|++++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            57899999999999999999888889999999985543  33445543 22  23333 22322222111 246999999


Q ss_pred             CCC
Q 018013          304 SVG  306 (362)
Q Consensus       304 ~~g  306 (362)
                      |+|
T Consensus        86 nAg   88 (257)
T 3tl3_A           86 CAG   88 (257)
T ss_dssp             CGG
T ss_pred             CCC
Confidence            998

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.74  E-value=8e-05  Score=66.51  Aligned_cols=104  Identities=19%  Similarity=0.184  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      ++++++|+||+|++|..+++.+.. .|++|++++++.++.+.+.    +.+.. .+  .|..+ +++.+.+....  -++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999888877 9999999999877655442    23432 22  33333 22333332221  136


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      +|++|+++|.           +               .++.+++.+++.|+||.+++...+
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~  143 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV  143 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence            9999999872           1               112233445557899999986554

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.72  E-value=7.6e-05  Score=65.77  Aligned_cols=105  Identities=22%  Similarity=0.281  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|..+++.+...|++|+++ .+++++.+.+    ++.+.. ..+  |..+ +++.+.+....  -++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999998 5555544433    333543 222  3333 22333332221  136


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCccccc
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQ  333 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~  333 (362)
                      +|++|+++|..                          ..+.+++.+.  ..|+||.+++.....
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  147 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII  147 (247)
T ss_dssp             CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc
Confidence            99999998731                          0223344442  358999999875533

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.72  E-value=7.7e-05  Score=75.00  Aligned_cols=106  Identities=21%  Similarity=0.270  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH---------hHHHH----HHHcCCcEEEeCCC-ccHHHHHHHHC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE---------HKAQL----LKELGVDRVINYKA-EDIKTVFKEEF  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~---------~~~~~----l~~~g~~~v~~~~~-~~~~~~~~~~~  294 (362)
                      .|++++|+||++|+|.+.++.+...|++|++++++.         ++.+.    +++.|...+.|..+ .+..+.+....
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999987653         33332    33445555566654 33333333221


Q ss_pred             --CCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          295 --PKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       295 --~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                        -+++|+++||+|-           +               ..+.+++.|+  .+|+||.+++..+..+
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~  156 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYG  156 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence              1469999999982           1               2335566664  3589999998776544

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.72  E-value=4.4e-05  Score=67.20  Aligned_cols=105  Identities=19%  Similarity=0.252  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHHH----HcCCc-EE-E--eCCC-ccHHHHHHHHC--CCc
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLLK----ELGVD-RV-I--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l~----~~g~~-~v-~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +++++|+||+|++|..+++.+...|++|+++ .++.++.+.+.    +.+.. .. +  |..+ +++.+.+....  -++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999998899999998 78777665442    23433 22 2  3333 22333322221  146


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|.           +.               .+.+++.++  ..|+||.+++.....+
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  145 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG  145 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC
Confidence            9999999872           11               233444443  3489999998765433

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.72  E-value=0.00017  Score=64.95  Aligned_cols=101  Identities=22%  Similarity=0.276  Sum_probs=70.9

Q ss_pred             HHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCC-c--EEEeCCCccHHHHH
Q 018013          220 IALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGV-D--RVINYKAEDIKTVF  290 (362)
Q Consensus       220 ~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~-~--~v~~~~~~~~~~~~  290 (362)
                      ..+.....+++++||-.| +|. |..+..+++..  +.+|++++.+++..+.+++    .+. +  .++..   ++.+. 
T Consensus       103 ~i~~~~~~~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~-  176 (277)
T 1o54_A          103 FIAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR---DISEG-  176 (277)
T ss_dssp             HHHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC---CGGGC-
T ss_pred             HHHHHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC---CHHHc-
Confidence            334444458899999998 444 88888888885  4699999999988877754    354 2  22221   11111 


Q ss_pred             HHHCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcC
Q 018013          291 KEEFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~  328 (362)
                        .....+|+|+.....  ..+..+.+.|+++|+++....
T Consensus       177 --~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          177 --FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             --CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             --ccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence              223569999987663  678999999999999998754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.72  E-value=0.00012  Score=66.39  Aligned_cols=103  Identities=19%  Similarity=0.376  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHCCCceeEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~~~g~Dvvi  302 (362)
                      -.|++++|+||+|++|.++++.+...|++|++++++.++.+.+. +++.. ..  .|..+ +++.+.++..  +++|+++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv   91 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI   91 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            46899999999999999999999999999999999998877765 44433 22  23333 2233333333  5799999


Q ss_pred             ECCCh---------H---------------HHHHHHHHhccCCEEEEEcCcccccC
Q 018013          303 ESVGG---------D---------------MFNLCLKALAVYGRLIVIGMISQYQG  334 (362)
Q Consensus       303 d~~g~---------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~  334 (362)
                      +++|.         +               ..+.+++.+.  .+||.+++...+..
T Consensus        92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~riv~isS~~~~~~  145 (291)
T 3rd5_A           92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT--DRVVTVSSMAHWPG  145 (291)
T ss_dssp             ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE--EEEEEECCGGGTTC
T ss_pred             ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hheeEeechhhccC
Confidence            99882         0               1223333343  38999999876544

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.71  E-value=6.6e-05  Score=68.00  Aligned_cols=106  Identities=23%  Similarity=0.294  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .+++++|+||+|++|.++++.+...|++|+++.+++++.+.+.    +.+... .  .|..+ +++.+.+...  .-+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999998889999999988877665442    235432 2  23333 2233333222  12469


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      |++|+++|..                          ..+.+++.+.  ..|+||.+++.....+
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  186 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG  186 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC
Confidence            9999998720                          1334444443  3489999998766544

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.71  E-value=6e-05  Score=66.35  Aligned_cols=105  Identities=20%  Similarity=0.247  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHHHC--CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      |++++|+||+|++|..+++.+...|++|+++ .+++++.+.+.    +.+... .  .|..+ +++.+.+....  -+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999995 78776655442    234432 2  23333 22333333221  2469


Q ss_pred             eEEEECCCh-----------HH---------------HHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          299 DIIYESVGG-----------DM---------------FNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~-----------~~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      |++|+++|.           +.               .+.+++.+.  ..|+||.+++.....+
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  144 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG  144 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC
Confidence            999999872           11               223444442  4689999998765443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.70  E-value=1.4e-05  Score=70.75  Aligned_cols=103  Identities=20%  Similarity=0.174  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHh-HHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEH-KAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~-~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .++++||+||++++|.++++.+.. .|++|+.++++++ +.+.+    .....|..+ +++.+.++.....++|++++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~----~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA   78 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----KFIKADLTKQQDITNVLDIIKNVSFDGIFLNA   78 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE----EEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc----eEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence            578999999999999998877665 7889999887654 11110    001223333 3344444333345799999998


Q ss_pred             Ch-----------H---------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          306 GG-----------D---------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       306 g~-----------~---------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      |.           +               ..+.+++.++++|+||.+++...+...
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  134 (244)
T 4e4y_A           79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK  134 (244)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC
Confidence            83           1               122233445667999999988776554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.70  E-value=0.00012  Score=65.85  Aligned_cols=107  Identities=20%  Similarity=0.233  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHHH----HcCCc-EEE--eCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLLK----ELGVD-RVI--NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l~----~~g~~-~v~--~~~~-~~~~~~~~~~~--~~  296 (362)
                      ..++++||+||+|++|.++++.+...|++|+++ .++.++.+.+.    +.+.. .++  |..+ +++.+.+....  -+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999877 66666655442    33443 222  3333 22333333221  14


Q ss_pred             ceeEEEECCCh----H-----------------------HHHHHHHHhcc-----CCEEEEEcCcccccC
Q 018013          297 GFDIIYESVGG----D-----------------------MFNLCLKALAV-----YGRLIVIGMISQYQG  334 (362)
Q Consensus       297 g~Dvvid~~g~----~-----------------------~~~~~~~~l~~-----~G~~v~~G~~~~~~~  334 (362)
                      ++|++|+++|.    .                       ..+.+++.+.+     +|+||.+++......
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  173 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG  173 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC
Confidence            69999999872    0                       11233444543     789999998776543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.69  E-value=6.1e-05  Score=67.62  Aligned_cols=108  Identities=17%  Similarity=0.307  Sum_probs=68.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHHHHHHC--CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLL----KELGVD-RV--INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~~~~~~--~~  296 (362)
                      ..+++++|+||++++|.++++.+...|++|++++ ++.++.+.+    ++.+.. .+  .|..+ +++.+.+....  -+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999998 444444332    223432 22  34333 22333333221  13


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      ++|++|+++|.           +               ..+.++..+  +..|+||.+++.......
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  169 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA  169 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC
Confidence            69999999872           1               122333434  346899999997765554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.69  E-value=0.00013  Score=64.46  Aligned_cols=105  Identities=14%  Similarity=0.165  Sum_probs=69.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc----CCc-EE--EeCCC-ccHHHHHHHHC--CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL----GVD-RV--INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~----g~~-~v--~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +++++|+||+|++|.+++..+...|++|++++++.++.+.+. ++    +.. .+  .|..+ +++.+.+....  -+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999998889999999999887766553 22    322 22  23333 22333333221  1369


Q ss_pred             eEEEECCCh--------------HHH---------------HHHHHHhc--cCCEEEEEcCcccccC
Q 018013          299 DIIYESVGG--------------DMF---------------NLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~--------------~~~---------------~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      |++|+++|.              +.+               +.+++.+.  ..|+||.+++...+.+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  148 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA  148 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC
Confidence            999999872              111               23344443  3589999998876554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.69  E-value=0.00015  Score=65.05  Aligned_cols=101  Identities=23%  Similarity=0.297  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EEEeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RVINYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.     ....  ...|..+ +++...++...  -+++|+++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn   84 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVH   84 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            689999999999999999999999999999999875421     1111  2234443 22333333221  246999999


Q ss_pred             CCCh-------------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          304 SVGG-------------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       304 ~~g~-------------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      ++|.             +               ..+.+++.|.  .+|+||.+++.....+
T Consensus        85 nAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~  145 (261)
T 4h15_A           85 MLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP  145 (261)
T ss_dssp             CCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             CCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC
Confidence            9872             0               1234555553  4689999999876554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.67  E-value=7.1e-05  Score=65.87  Aligned_cols=78  Identities=24%  Similarity=0.307  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHHc-CCc-EE--EeCCC-ccHHHHHHHH---CC-Cc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKEL-GVD-RV--INYKA-EDIKTVFKEE---FP-KG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~~-g~~-~v--~~~~~-~~~~~~~~~~---~~-~g  297 (362)
                      .+++++|+||+|++|.++++.+...|  ++|++++++.++.+.+++. +.. .+  .|..+ +++.+.+...   .+ .+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999999899  9999999998887777655 322 22  23333 2233333222   22 26


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|+++|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999986

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.65  E-value=0.00023  Score=64.65  Aligned_cols=94  Identities=19%  Similarity=0.183  Sum_probs=71.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      +++++||..| +|..+..++.+|+..|++|++++.+++..+.+++    .|.+  .++..+..+       .....+|+|
T Consensus       121 ~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-------l~d~~FDvV  192 (298)
T 3fpf_A          121 RRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-------IDGLEFDVL  192 (298)
T ss_dssp             CTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-------GGGCCCSEE
T ss_pred             CCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-------CCCCCcCEE
Confidence            8999999999 6776777777888889999999999998888764    3553  222222222       124679999


Q ss_pred             EECCCh----HHHHHHHHHhccCCEEEEEcCc
Q 018013          302 YESVGG----DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       302 id~~g~----~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +.+...    ..++.+.+.|++||+++.....
T Consensus       193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          193 MVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             EECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             EECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            976542    5789999999999999987643

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.64  E-value=2.1e-05  Score=69.92  Aligned_cols=95  Identities=19%  Similarity=0.231  Sum_probs=62.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChH-
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      ++++|+||+|++|.++++.+...|++|+++++++++.+.      ....|..+ +++.+.++. ..+++|++|+++|.. 
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~~~~Dl~~~~~v~~~~~~-~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------DLSTAEGRKQAIADVLAK-CSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHHHHHHHHHHTT-CTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------ccccCCCCHHHHHHHHHH-hCCCCCEEEECCCCCC
Confidence            479999999999999999998899999999987654211      00001111 112222221 124689999998731 


Q ss_pred             ------------------HHHHHHHHhccC--CEEEEEcCcccc
Q 018013          309 ------------------MFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       309 ------------------~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                                        ..+.+++.|.+.  |+||.+++...+
T Consensus        75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence                              134455555443  899999998776

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.63  E-value=0.00015  Score=62.78  Aligned_cols=98  Identities=14%  Similarity=0.225  Sum_probs=65.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCcc-HHHHHHHHCCCceeEEEECCChH--
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGGD--  308 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~-~~~~~~~~~~~g~Dvvid~~g~~--  308 (362)
                      +|||+||+|.+|..+++.+...|++|+++++++++.+.+  .++ .++..+-.+ ..+ +.... .++|+||+++|..  
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~-~~~~~D~~d~~~~-~~~~~-~~~d~vi~~ag~~~~   76 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNV-KAVHFDVDWTPEE-MAKQL-HGMDAIINVSGSGGK   76 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTE-EEEECCTTSCHHH-HHTTT-TTCSEEEECCCCTTS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCc-eEEEecccCCHHH-HHHHH-cCCCEEEECCcCCCC
Confidence            699999999999999999999999999999988764432  122 233322223 222 22222 3699999999832  


Q ss_pred             --------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          309 --------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       309 --------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                              .....++.++..  ++||.+++...+..
T Consensus        77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~  112 (219)
T 3dqp_A           77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP  112 (219)
T ss_dssp             SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG
T ss_pred             CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC
Confidence                    133444444443  59999999776554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.61  E-value=0.00014  Score=65.45  Aligned_cols=107  Identities=21%  Similarity=0.196  Sum_probs=69.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      -.++++||+||+|++|.+++..+...|++|++++++.++.+.+    ++.+.. ..+  |..+ +++.+.+....  -+.
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999988888899999999876654433    233543 222  3333 22333332211  135


Q ss_pred             eeEEEECCCh--H-----------H---------------HHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          298 FDIIYESVGG--D-----------M---------------FNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~--~-----------~---------------~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|++|+++|.  .           .               .+.+++.++  ..|+||.+++......
T Consensus       112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  178 (279)
T 3ctm_A          112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV  178 (279)
T ss_dssp             CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC
T ss_pred             CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC
Confidence            9999999872  1           0               234445553  3689999998776543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.60  E-value=0.00035  Score=66.60  Aligned_cols=102  Identities=17%  Similarity=0.122  Sum_probs=77.4

Q ss_pred             HHHHHHHh-CC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          218 ASIALEQA-GP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       218 A~~al~~~-~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .+.++.+. .. -.|++|+|.| .|.+|+.+++.++.+|++|+++..++.+.......|... .     ++.+.+     
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v-----~LeElL-----  300 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-V-----TLDDAA-----  300 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-C-----CHHHHG-----
T ss_pred             HHHHHHHhcCCcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-c-----cHHHHH-----
Confidence            34455443 33 7899999999 799999999999999999999998887665555666642 1     233333     


Q ss_pred             CceeEEEECCChH-HH-HHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGGD-MF-NLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~~-~~-~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ...|+|+.+.+.. .+ ...+..|++++.++.+|..+.
T Consensus       301 ~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdv  338 (464)
T 3n58_A          301 STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDN  338 (464)
T ss_dssp             GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred             hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence            2589999998853 33 678899999999999988653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.58  E-value=0.00026  Score=61.42  Aligned_cols=98  Identities=17%  Similarity=0.229  Sum_probs=64.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH--
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD--  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~--  308 (362)
                      .+|||+||+|.+|..+++.+...|.+|+++++++++.+.+. .++ .++..+-.+..+.....  .++|+||+++|..  
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~-~~~~~Dl~d~~~~~~~~--~~~d~vi~~a~~~~~   80 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHL-KVKKADVSSLDEVCEVC--KGADAVISAFNPGWN   80 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTE-EEECCCTTCHHHHHHHH--TTCSEEEECCCC---
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-Cce-EEEEecCCCHHHHHHHh--cCCCEEEEeCcCCCC
Confidence            68999999999999999999999999999999877643221 112 22222222222222222  2599999998842  


Q ss_pred             ----------HHHHHHHHhccC--CEEEEEcCcccc
Q 018013          309 ----------MFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       309 ----------~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                                .....++.++..  ++||.+++.+.+
T Consensus        81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~  116 (227)
T 3dhn_A           81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSL  116 (227)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhc
Confidence                      223445555544  499999987643

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.57  E-value=0.00017  Score=65.02  Aligned_cols=96  Identities=18%  Similarity=0.143  Sum_probs=66.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh--
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG--  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~--  307 (362)
                      +|||+||+|.+|..+++.+... |.+|+++++++++...+...++..+ .|..+.  .. +.... .++|+||++++.  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~--~~-l~~~~-~~~d~vi~~a~~~~   77 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQ--ES-MVEAF-KGMDTVVFIPSIIH   77 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCH--HH-HHHHT-TTCSEEEECCCCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCH--HH-HHHHH-hCCCEEEEeCCCCc
Confidence            5999999999999999888877 8999999999887655544455432 344332  22 22222 379999999883  


Q ss_pred             ------HHHHHHHHHhccC--CEEEEEcCccc
Q 018013          308 ------DMFNLCLKALAVY--GRLIVIGMISQ  331 (362)
Q Consensus       308 ------~~~~~~~~~l~~~--G~~v~~G~~~~  331 (362)
                            ......++.++..  ++||.+++.+.
T Consensus        78 ~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~  109 (289)
T 3e48_A           78 PSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD  109 (289)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred             cchhhHHHHHHHHHHHHHcCCCEEEEEcccCC
Confidence                  2334555655554  48999988654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.57  E-value=0.0011  Score=61.40  Aligned_cols=104  Identities=20%  Similarity=0.113  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH----hHHHHHHHc------CCcEEEeCCCccHHHHHHHHCCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE----HKAQLLKEL------GVDRVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~----~~~~~l~~~------g~~~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      .+++|||+||+|.+|..+++.+...|.+|++++++.    +..+.+...      .--.++..+-.+... +.... .++
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~-~~~  101 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT-CEQVM-KGV  101 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH-HHHHT-TTC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHH-HHHHh-cCC
Confidence            468999999999999999999999999999999843    333334332      111233222223222 22222 279


Q ss_pred             eEEEECCChH------------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          299 DIIYESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       299 Dvvid~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      |+||++++..                  .....++.++..  ++||.+++.+.+..
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~  157 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGD  157 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTT
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCC
Confidence            9999999830                  012344555444  49999988776543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.55  E-value=0.00024  Score=64.97  Aligned_cols=93  Identities=16%  Similarity=0.228  Sum_probs=72.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|+|.| .|.+|..+++.++..|++|++.+++.++.+.+.++|.. +++.  .++.+.+     .+.|+|+.++..
T Consensus       155 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~~l~~~l-----~~aDvVi~~~p~  225 (300)
T 2rir_A          155 IHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHT--DELKEHV-----KDIDICINTIPS  225 (300)
T ss_dssp             STTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEG--GGHHHHS-----TTCSEEEECCSS
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEch--hhHHHHh-----hCCCEEEECCCh
Confidence            5789999999 69999999999999999999999998887777777764 3322  2333322     458999999885


Q ss_pred             HHH-HHHHHHhccCCEEEEEcCc
Q 018013          308 DMF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 ~~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                      ..+ ...++.+++++.+|.++..
T Consensus       226 ~~i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          226 MILNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             CCBCHHHHTTSCTTCEEEECSST
T ss_pred             hhhCHHHHHhCCCCCEEEEEeCC
Confidence            332 3467889999999999863

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.55  E-value=0.00027  Score=70.97  Aligned_cols=107  Identities=22%  Similarity=0.259  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH--hHHHHHHHcCCcEEEeCCCc--cHHHHHHHHC--CCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE--HKAQLLKELGVDRVINYKAE--DIKTVFKEEF--PKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l~~~g~~~v~~~~~~--~~~~~~~~~~--~~g~Dvvi  302 (362)
                      .|++++|+||++|+|.+.++.+...|++|+++++..  +-.+.+++.|...+....+-  +..+.+....  -+++|+++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            478999999999999999999999999999987532  22344455565444333322  2222222211  14699999


Q ss_pred             ECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          303 ESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       303 d~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ||+|-           +               ..+.+++.|+  .+|+||.+++..+..+.
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~  461 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN  461 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC
Confidence            99882           1               2235566664  45899999998765443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.54  E-value=0.00056  Score=60.74  Aligned_cols=78  Identities=17%  Similarity=0.206  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHH-HH----HcCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQL-LK----ELGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~-l~----~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++... ++    +.+.. ..  .|..+ +++.+.++...  -+.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999988899999999986443322 22    23443 22  24333 22333333321  246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|+++|
T Consensus        93 id~li~~Ag  101 (265)
T 1h5q_A           93 ISGLIANAG  101 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.54  E-value=0.00032  Score=62.65  Aligned_cols=107  Identities=20%  Similarity=0.230  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHhH-----HHHHH-HcCCcEE---EeCCC-ccHHHHHHHHC-
Q 018013          228 ASGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEHK-----AQLLK-ELGVDRV---INYKA-EDIKTVFKEEF-  294 (362)
Q Consensus       228 ~~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~~-----~~~l~-~~g~~~v---~~~~~-~~~~~~~~~~~-  294 (362)
                      -.+++++|+||+  +++|.++++.+...|++|++++++.++     .+.+. ..+....   .|..+ +++.+.+.... 
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            367899999998  899999999988999999999876433     22232 3454322   23333 22333333221 


Q ss_pred             -CCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          295 -PKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       295 -~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                       -+++|++|+++|.           +               ..+.+++.+.  ..|+||.+++......
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  166 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIA  166 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccccc
Confidence             2469999999872           1               1123334443  4689999998776544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.53  E-value=0.00036  Score=62.02  Aligned_cols=101  Identities=19%  Similarity=0.243  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHH--CCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEE--FPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~--~~~g~Dvvid~  304 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.     +. ...|..+ +++.+.+...  .-+++|+++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            47899999999999999999999999999999987654321     21 1234443 2233333222  12469999999


Q ss_pred             CChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          305 VGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       305 ~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      +|..                          ..+.+++.+.  ..|+||.+++.....+
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  152 (253)
T 2nm0_A           95 AGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG  152 (253)
T ss_dssp             CSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC
Confidence            8720                          1223344443  4689999998766443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.53  E-value=0.00028  Score=68.37  Aligned_cols=107  Identities=21%  Similarity=0.276  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH--HH-HHHHcCCcEE-EeCCC-ccHHHHHH---HHCCCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK--AQ-LLKELGVDRV-INYKA-EDIKTVFK---EEFPKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~--~~-~l~~~g~~~v-~~~~~-~~~~~~~~---~~~~~g~Dv  300 (362)
                      +++++||+||+|++|.++++.+...|++|+++.++...  .+ ...+.+...+ .|..+ +++.+.+.   +..++.+|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            67899999999999999998888889999999885432  22 2345565422 34444 33333333   234445999


Q ss_pred             EEECCCh-----------HHHH---------------HHHHHhc--cCCEEEEEcCcccccCC
Q 018013          301 IYESVGG-----------DMFN---------------LCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       301 vid~~g~-----------~~~~---------------~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|+|+|-           +.++               .+...+.  +.|+||.+++.....+.
T Consensus       292 lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~  354 (454)
T 3u0b_A          292 LVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN  354 (454)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC
T ss_pred             EEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC
Confidence            9999882           1111               1222222  67999999998765553

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.52  E-value=0.00029  Score=62.77  Aligned_cols=79  Identities=15%  Similarity=0.329  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEecCCHhHHHHHHH---cCCc-EE--EeCCC-ccHHHHHHHH---C
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG---NTVVATCGGEHKAQLLKE---LGVD-RV--INYKA-EDIKTVFKEE---F  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G---~~Vi~~~~~~~~~~~l~~---~g~~-~v--~~~~~-~~~~~~~~~~---~  294 (362)
                      -.++++||+||+|++|.++++.+...|   ++|++++++.++.+.+++   .+.. .+  .|..+ +++.+.+...   .
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            467899999999999999999998899   999999998765444432   2332 22  34333 3344443332   2


Q ss_pred             CC-ceeEEEECCC
Q 018013          295 PK-GFDIIYESVG  306 (362)
Q Consensus       295 ~~-g~Dvvid~~g  306 (362)
                      +. ++|++|+++|
T Consensus        99 g~~~id~li~~Ag  111 (267)
T 1sny_A           99 KDQGLNVLFNNAG  111 (267)
T ss_dssp             GGGCCSEEEECCC
T ss_pred             CCCCccEEEECCC
Confidence            22 6999999987

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.51  E-value=0.00038  Score=59.10  Aligned_cols=102  Identities=17%  Similarity=0.078  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      +++|+|+||+|.+|..+++.+...|.+|+++++++++.+.+...++ .++..+-.+..+..+..  +++|+||++++.. 
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~--~~~d~vi~~a~~~~   79 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVDKTV--AGQDAVIVLLGTRN   79 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTSHHHHHHHH--TTCSEEEECCCCTT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCce-EEEEecCCCHHHHHHHH--cCCCEEEECccCCC
Confidence            3689999999999999999998899999999998765432211222 23322222222222222  3589999998831 


Q ss_pred             ----------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          309 ----------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       309 ----------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                                .....++.+++  -++||.+++...+..
T Consensus        80 ~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~  117 (206)
T 1hdo_A           80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWD  117 (206)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred             CCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccC
Confidence                      13344444433  369999998876554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.50  E-value=6.7e-05  Score=69.57  Aligned_cols=106  Identities=15%  Similarity=0.209  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH----HHHHHc------CCc-EE--EeCCC-ccHHHHHHHHC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA----QLLKEL------GVD-RV--INYKA-EDIKTVFKEEF  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~----~~l~~~------g~~-~v--~~~~~-~~~~~~~~~~~  294 (362)
                      .+++++|+|++|++|.+++..+...|++|+.+.++.++.    +.++..      +.. .+  .|..+ +++.+.+....
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            367899999999999999999999999888776543221    222222      222 22  23333 33444444433


Q ss_pred             CCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          295 PKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       295 ~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      .+++|++|+++|.           +               ..+.++..|+  ..|+||.+++......
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~  148 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG  148 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC
Confidence            3569999999872           1               1123334443  4689999998877654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.47  E-value=0.0003  Score=68.07  Aligned_cols=90  Identities=22%  Similarity=0.225  Sum_probs=70.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++++|+| .|++|.++++.++..|++|+++++++.+...+...|++. .+.  +        ..-..+|+++++.|.
T Consensus       263 L~GKtVvVtG-aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-~~l--e--------e~~~~aDvVi~atG~  330 (488)
T 3ond_A          263 IAGKVAVVAG-YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-LTL--E--------DVVSEADIFVTTTGN  330 (488)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCG--G--------GTTTTCSEEEECSSC
T ss_pred             ccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-CCH--H--------HHHHhcCEEEeCCCC
Confidence            5799999999 579999999999999999999999988877777777532 111  1        112468999999985


Q ss_pred             -HHH-HHHHHHhccCCEEEEEcCc
Q 018013          308 -DMF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 -~~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                       +.+ ...++.+++++.++.+|..
T Consensus       331 ~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          331 KDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             SCSBCHHHHTTSCTTEEEEESSST
T ss_pred             hhhhhHHHHHhcCCCeEEEEcCCC
Confidence             333 4478899999999999875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.46  E-value=0.00035  Score=62.48  Aligned_cols=107  Identities=21%  Similarity=0.298  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe-cCCHhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT-CGGEHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|.++++.+...|++|+++ .++.++.+.+    ++.+.. .++  |..+ +++.+.+....  .++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999665 4555544333    233433 232  3333 22333333221  146


Q ss_pred             eeEEEECCCh-----------HH---------------HHHHHHHh---ccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG-----------DM---------------FNLCLKAL---AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~-----------~~---------------~~~~~~~l---~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++|+++|.           +.               .+.++..+   +..|+||.+++.....+.
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (267)
T 4iiu_A          105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN  171 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC
T ss_pred             ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC
Confidence            9999999872           11               11122222   456899999987765553

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.43  E-value=0.00041  Score=61.81  Aligned_cols=78  Identities=19%  Similarity=0.303  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHHHHHH----cCCc-EE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQLLKE----LGVD-RV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~~l~~----~g~~-~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++. +..+.+++    .+.. .+  .|..+ +++.+.+....  -++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999986653 33444432    2322 22  33333 22333333221  136


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|+++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.43  E-value=0.00042  Score=60.94  Aligned_cols=78  Identities=32%  Similarity=0.494  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-----cCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-----LGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-----~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++.++.+.+.+     .+.. ..+  |..+ +++.+.+....  -++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999988899999999998877665432     3543 222  3333 22333332221  246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|+++|
T Consensus        86 ~d~vi~~Ag   94 (248)
T 2pnf_A           86 IDILVNNAG   94 (248)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.40  E-value=0.00094  Score=61.57  Aligned_cols=102  Identities=15%  Similarity=0.151  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHH----HHHH-cCCc-EEE--eCCCc-cHHHHHHHHCCCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ----LLKE-LGVD-RVI--NYKAE-DIKTVFKEEFPKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~----~l~~-~g~~-~v~--~~~~~-~~~~~~~~~~~~g~D  299 (362)
                      .+++|||+||+|++|..+++.+...|++|++++++.++..    .+.+ .+.. .++  |..+. ++.+.+..   .++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            4679999999999999999999999999999988654322    2221 2322 222  33332 23333322   4799


Q ss_pred             EEEECCChH------------------HHHHHHHHhccC--CEEEEEcCccccc
Q 018013          300 IIYESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       300 vvid~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                      +||++++..                  ....+++.++..  ++||.+++...+.
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g  134 (341)
T 3enk_A           81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG  134 (341)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred             EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence            999998721                  111334444433  6999998876653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.39  E-value=0.00013  Score=64.04  Aligned_cols=101  Identities=14%  Similarity=0.191  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCcEE-EeCCC-ccHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVDRV-INYKA-EDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~-~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+++|+|+||+|++|..+++.+...|+  +|+++++++++.+.+...++..+ .|..+ +++.+.    . .++|++|+|
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~----~-~~~d~vi~~   91 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASA----F-QGHDVGFCC   91 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGG----G-SSCSEEEEC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHH----h-cCCCEEEEC
Confidence            367999999999999999998888899  99999987654332221122221 22222 122111    1 369999999


Q ss_pred             CChH---------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          305 VGGD---------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       305 ~g~~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      +|..               .....++.+++  .++||.+++...+..
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~  138 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS  138 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC
Confidence            9831               11233444433  369999999877653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.39  E-value=0.00041  Score=63.75  Aligned_cols=35  Identities=20%  Similarity=0.188  Sum_probs=31.6

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCC
Q 018013          229 SGKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       229 ~g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      .|++++|+||  ++|+|.++++.+...|++|++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            5789999998  7999999999998899999999865

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.37  E-value=0.00085  Score=53.43  Aligned_cols=76  Identities=17%  Similarity=0.170  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ++++|+|+|+ |.+|..+++.+...|.+|+++++++++.+.+++.+... +..+..+. +.+.+..-.++|+++.+++.
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~d~~~~-~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHA-VIANATEE-NELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEE-EECCTTCH-HHHHTTTGGGCSEEEECCCS
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEE-EEeCCCCH-HHHHhcCCCCCCEEEECCCC
Confidence            3567999995 99999999999999999999999888877776666543 32222222 22222223579999999995

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.35  E-value=0.00012  Score=64.52  Aligned_cols=97  Identities=20%  Similarity=0.212  Sum_probs=62.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChH-
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      ++|||+||+|++|..++..+...|++|++++++.++.+.      ....|..+ +++.+.+... .+++|++|+++|.. 
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------DLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVGV   74 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCCT
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------cccCCcccHHHHHHHHHHc-CCCccEEEECCCCCC
Confidence            479999999999999999888899999999987653210      00001111 1222223222 24799999998721 


Q ss_pred             ------------------HHHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          309 ------------------MFNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       309 ------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                                        .++.+.+.++.  .++||.+++...+..
T Consensus        75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  120 (255)
T 2dkn_A           75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP  120 (255)
T ss_dssp             TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGST
T ss_pred             cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccc
Confidence                              12344444543  389999998877644

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.35  E-value=0.0023  Score=53.59  Aligned_cols=94  Identities=14%  Similarity=0.110  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEE-eCCCccHHHHHHHH-CCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVI-NYKAEDIKTVFKEE-FPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~~~~~~~~~~~~-~~~g~Dvvid~~  305 (362)
                      .+++|+|.| .|.+|..+++.++.. |.+|+++++++++.+.+++.|...+. |..+.   +.+... .-.++|+|+.++
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~---~~l~~~~~~~~ad~vi~~~  113 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDP---DFWERILDTGHVKLVLLAM  113 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCH---HHHHTBCSCCCCCEEEECC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCH---HHHHhccCCCCCCEEEEeC
Confidence            367899998 799999999999998 99999999999999999888887544 33322   223333 235799999999


Q ss_pred             ChH-HHHHH---HHHhccCCEEEEE
Q 018013          306 GGD-MFNLC---LKALAVYGRLIVI  326 (362)
Q Consensus       306 g~~-~~~~~---~~~l~~~G~~v~~  326 (362)
                      ++. ....+   .+.+.+..+++..
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          114 PHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCEEEEE
Confidence            853 22233   3444445577654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.34  E-value=0.00029  Score=64.11  Aligned_cols=35  Identities=20%  Similarity=0.272  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCC
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      .++++||+||+  +++|.++++.+...|++|++++++
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            57899999998  999999999888899999998754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.34  E-value=0.00047  Score=61.55  Aligned_cols=103  Identities=17%  Similarity=0.143  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      -.++++||+||+|++|.++++.+...|++|++++++.++.+..   .+. ...|..+ +++.+.+....  -+++|++++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            3578999999999999999999999999999999876542211   111 1123333 22333333221  146999999


Q ss_pred             CCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCccccc
Q 018013          304 SVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQ  333 (362)
Q Consensus       304 ~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~  333 (362)
                      ++|.           +               ..+.++..+.  ..|+||.+++.....
T Consensus       103 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  160 (260)
T 3un1_A          103 NAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQ  160 (260)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTS
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcc
Confidence            9872           1               1223344443  358999998876644

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=97.34  E-value=0.00038  Score=64.00  Aligned_cols=35  Identities=26%  Similarity=0.342  Sum_probs=31.4

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCC
Q 018013          229 SGKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       229 ~g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      .++++||+||  ++++|.++++.+...|++|++++++
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            5789999998  8999999999988899999999764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.32  E-value=0.0029  Score=50.66  Aligned_cols=95  Identities=14%  Similarity=0.117  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE-eCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI-NYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.++|+|.| .|.+|..+++.++..|.+|+++++++++.+.+++.|...+. |..+.+   .++...-.++|+++.+++.
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~---~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEE---IMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHH---HHHHTTGGGCSEEEECCSC
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHH---HHHhcCcccCCEEEEECCC
Confidence            457899999 69999999999999999999999999999999888886543 222222   2333333579999999996


Q ss_pred             HH----HHHHHHHhccCCEEEEEc
Q 018013          308 DM----FNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       308 ~~----~~~~~~~l~~~G~~v~~G  327 (362)
                      +.    +-...+.+.+..+++..-
T Consensus        82 ~~~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           82 GYEAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred             hHHHHHHHHHHHHHCCCCeEEEEE
Confidence            42    223445566777776543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.32  E-value=0.0007  Score=64.69  Aligned_cols=80  Identities=18%  Similarity=0.055  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEecCCHh---------------HH-HHHHHcCCcE-E--EeCCC-cc
Q 018013          228 ASGKKVLVTAAAGGTGQF--AVQLAKLAGNTVVATCGGEH---------------KA-QLLKELGVDR-V--INYKA-ED  285 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~--aiqla~~~G~~Vi~~~~~~~---------------~~-~~l~~~g~~~-v--~~~~~-~~  285 (362)
                      ..|+++||+||++|+|.+  .+..+...|++|+++.++..               .. +.+++.|... .  .|..+ ++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            779999999999999998  55555556999999887432               22 2334566542 2  23333 23


Q ss_pred             HHHHHHHH--CCCceeEEEECCCh
Q 018013          286 IKTVFKEE--FPKGFDIIYESVGG  307 (362)
Q Consensus       286 ~~~~~~~~--~~~g~Dvvid~~g~  307 (362)
                      +.+.+...  .-+++|++++|+|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcc
Confidence            33333332  12469999999773

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.31  E-value=0.0014  Score=60.34  Aligned_cols=100  Identities=20%  Similarity=0.115  Sum_probs=66.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc-----C--CcEE--EeCCCc-cHHHHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL-----G--VDRV--INYKAE-DIKTVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~-----g--~~~v--~~~~~~-~~~~~~~~~~~~g  297 (362)
                      -++++|||+||+|.+|..++..+...|.+|++++++.++.+.+.+.     +  +..+  .|..+. .+.+.    . .+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~----~-~~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV----I-KG   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT----T-TT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHH----H-cC
Confidence            4678999999999999999998888999999999988776554321     2  2222  233332 22111    1 36


Q ss_pred             eeEEEECCChH---------------HHHHHHHHhc--c-CCEEEEEcCcccc
Q 018013          298 FDIIYESVGGD---------------MFNLCLKALA--V-YGRLIVIGMISQY  332 (362)
Q Consensus       298 ~Dvvid~~g~~---------------~~~~~~~~l~--~-~G~~v~~G~~~~~  332 (362)
                      +|+||++++..               .....++.+.  . .++||.+++...+
T Consensus        84 ~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~  136 (342)
T 1y1p_A           84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSA  136 (342)
T ss_dssp             CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGT
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHh
Confidence            99999998721               1123444443  2 3799999987664

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.31  E-value=0.0024  Score=59.32  Aligned_cols=102  Identities=14%  Similarity=0.204  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEecCCHhHHHHHH-HcCC-c-EEE--eCCCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GN-TVVATCGGEHKAQLLK-ELGV-D-RVI--NYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~-~Vi~~~~~~~~~~~l~-~~g~-~-~v~--~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      -.+++|||+||+|.+|..+++.+... |. +|+++++++.+.+.+. ++.. . .++  |..+  ... +.... .++|+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~-l~~~~-~~~D~   94 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD--LER-LNYAL-EGVDI   94 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC--HHH-HHHHT-TTCSE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC--HHH-HHHHH-hcCCE
Confidence            45789999999999999999888777 98 9999999988776654 2321 1 222  3333  222 22222 36999


Q ss_pred             EEECCChH-----------H-------HHHHHHHhccC--CEEEEEcCccccc
Q 018013          301 IYESVGGD-----------M-------FNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       301 vid~~g~~-----------~-------~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                      ||++++..           .       ....++...+.  ++||.+++...+.
T Consensus        95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~  147 (344)
T 2gn4_A           95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN  147 (344)
T ss_dssp             EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS
T ss_pred             EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC
Confidence            99998721           0       11333444333  5999998765543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.30  E-value=0.00064  Score=64.73  Aligned_cols=80  Identities=21%  Similarity=0.212  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHhH----------------HHHHHHcCCcE-EE--eCCCc-cH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEHK----------------AQLLKELGVDR-VI--NYKAE-DI  286 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~~----------------~~~l~~~g~~~-v~--~~~~~-~~  286 (362)
                      +.++++||+||++|+|.+++..+.. .|++|+++.++.+.                .+.+++.|... .+  |..+. ..
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            5789999999999999998887777 99999998775432                13445667542 23  33332 22


Q ss_pred             HH---HHHHHCCCceeEEEECCCh
Q 018013          287 KT---VFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       287 ~~---~~~~~~~~g~Dvvid~~g~  307 (362)
                      .+   .+.+..++++|+++|++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCcc
Confidence            22   3333443569999999874

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.29  E-value=0.0002  Score=66.26  Aligned_cols=36  Identities=6%  Similarity=-0.034  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCH
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      .+++++|+|+++  |+|.++++.+...|++|+++++++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            368999999765  999999999889999999887654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.27  E-value=0.00075  Score=61.37  Aligned_cols=78  Identities=19%  Similarity=0.243  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-H--------cCCc-EE--EeCCC-ccHHHHHHHHC-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-E--------LGVD-RV--INYKA-EDIKTVFKEEF-  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~--------~g~~-~v--~~~~~-~~~~~~~~~~~-  294 (362)
                      .+++++|+||+|++|.++++.+...|++|++++++.++.+.+. +        .+.. ..  .|..+ +++.+.+.... 
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999899999999999887765442 2        2332 22  23333 22333332221 


Q ss_pred             -CCceeEEEECCC
Q 018013          295 -PKGFDIIYESVG  306 (362)
Q Consensus       295 -~~g~Dvvid~~g  306 (362)
                       -+++|++|+++|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence             136999999988

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.26  E-value=0.0013  Score=62.58  Aligned_cols=90  Identities=19%  Similarity=0.164  Sum_probs=70.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|+|.| .|.+|..+++.++.+|++|+++++++.+...+...|....      ++.+.+     ...|+|+.+.+.
T Consensus       209 L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------sL~eal-----~~ADVVilt~gt  276 (436)
T 3h9u_A          209 IAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------LVEDVV-----EEAHIFVTTTGN  276 (436)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------CHHHHT-----TTCSEEEECSSC
T ss_pred             ccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------CHHHHH-----hhCCEEEECCCC
Confidence            5799999999 8999999999999999999999998877776777776421      344333     348999998875


Q ss_pred             -HHH-HHHHHHhccCCEEEEEcCc
Q 018013          308 -DMF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 -~~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                       ..+ ...++.|+++..++.+|..
T Consensus       277 ~~iI~~e~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          277 DDIITSEHFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             SCSBCTTTGGGCCTTEEEEECSSS
T ss_pred             cCccCHHHHhhcCCCcEEEEeCCC
Confidence             233 2567889999999998853

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.25  E-value=0.0014  Score=60.30  Aligned_cols=75  Identities=27%  Similarity=0.387  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH--HHHHHcCC--c-EEE--eCCC-ccHHHHHHHHCCCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA--QLLKELGV--D-RVI--NYKA-EDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~--~~l~~~g~--~-~v~--~~~~-~~~~~~~~~~~~~g~Dv  300 (362)
                      .+++|||+||+|.+|..+++.+...|++|++++++.++.  +.++.++.  . .++  |..+ +.+.+.++..   ++|+
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            367899999999999999998888899999999876542  23444321  1 222  3222 2233333322   5899


Q ss_pred             EEECCC
Q 018013          301 IYESVG  306 (362)
Q Consensus       301 vid~~g  306 (362)
                      ||++++
T Consensus        79 vih~A~   84 (345)
T 2z1m_A           79 VYNLAA   84 (345)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.24  E-value=0.0019  Score=58.72  Aligned_cols=97  Identities=16%  Similarity=0.148  Sum_probs=63.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      +++|||+||+|.+|..+++.+...|.+|+++++++.+.+ ++  ++..+ .. +-. .+.+.+... ++|+||++++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~-~~-Dl~-~~~~~~~~~-~~d~Vih~a~~~~   74 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEYR-VS-DYT-LEDLINQLN-DVDAVVHLAATRG   74 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEE-EC-CCC-HHHHHHHTT-TCSEEEECCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEEE-Ec-ccc-HHHHHHhhc-CCCEEEEccccCC
Confidence            368999999999999999999999999999999855444 43  44322 22 222 333333333 799999998731 


Q ss_pred             -------------HHHHHHHHhccC--CEEEEEcCccccc
Q 018013          309 -------------MFNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       309 -------------~~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                                   .....++.++..  .+||.+++...+.
T Consensus        75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg  114 (311)
T 3m2p_A           75 SQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS  114 (311)
T ss_dssp             SSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence                         123445555444  4899998866554

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.24  E-value=0.00093  Score=58.35  Aligned_cols=71  Identities=20%  Similarity=0.183  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCC-ccHHHHHHHH-CCCceeEEEECCC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKA-EDIKTVFKEE-FPKGFDIIYESVG  306 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~-~~~~~~~~~~-~~~g~Dvvid~~g  306 (362)
                      ++++||+||+|++|..+++.+...|++|++++++.+ .   .+  .. ...|..+ +++.+.++.. .-+++|++++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---ED--LIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---SS--SEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---cc--eEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            578999999999999999888888999999998764 1   11  11 1233333 2333333322 1136999999987

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.22  E-value=0.00044  Score=61.81  Aligned_cols=97  Identities=16%  Similarity=0.090  Sum_probs=61.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh--
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG--  307 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~--  307 (362)
                      +++|||+||+|++|..+++.+...|++|+++++++.+..   ..++ .++..+-.+..+.....  .++|+||++.|.  
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~-~~~~~Dl~d~~~~~~~~--~~~D~vi~~Ag~~~   76 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNE-ECVQCDLADANAVNAMV--AGCDGIVHLGGISV   76 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTE-EEEECCTTCHHHHHHHH--TTCSEEEECCSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCC-EEEEcCCCCHHHHHHHH--cCCCEEEECCCCcC
Confidence            578999999999999999998888999999998865432   1111 22222222222222112  269999999873  


Q ss_pred             -H----HHH-------HHHHHhcc--CCEEEEEcCcccc
Q 018013          308 -D----MFN-------LCLKALAV--YGRLIVIGMISQY  332 (362)
Q Consensus       308 -~----~~~-------~~~~~l~~--~G~~v~~G~~~~~  332 (362)
                       +    .++       .+++.+++  .++||.+++...+
T Consensus        77 ~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~  115 (267)
T 3rft_A           77 EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTI  115 (267)
T ss_dssp             CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHh
Confidence             1    111       22333332  3699999987665

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.22  E-value=0.00091  Score=59.94  Aligned_cols=97  Identities=14%  Similarity=0.212  Sum_probs=64.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      +|||+||+|.+|..+++.+...  |.+|+++++++++.+.+...++..+ .|..+  ... +.... .++|+||++++. 
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d--~~~-~~~~~-~~~d~vi~~a~~~   76 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGD--EAA-LTSAL-QGVEKLLLISSSE   76 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTC--HHH-HHHHT-TTCSEEEECC---
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCC--HHH-HHHHH-hCCCEEEEeCCCC
Confidence            4899999999999999888877  8999999998777665555555432 23333  222 22222 358999999874 


Q ss_pred             -----HHHHHHHHHhccC--CEEEEEcCcccc
Q 018013          308 -----DMFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       308 -----~~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                           ......++.++..  ++||.+++...+
T Consensus        77 ~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~  108 (286)
T 2zcu_A           77 VGQRAPQHRNVINAAKAAGVKFIAYTSLLHAD  108 (286)
T ss_dssp             -----CHHHHHHHHHHHHTCCEEEEEEETTTT
T ss_pred             chHHHHHHHHHHHHHHHcCCCEEEEECCCCCC
Confidence                 1234445544432  599999887665

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.19  E-value=0.00083  Score=61.78  Aligned_cols=103  Identities=15%  Similarity=0.160  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH--HHHHHc----CCcEE-EeCCC-ccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA--QLLKEL----GVDRV-INYKA-EDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~--~~l~~~----g~~~v-~~~~~-~~~~~~~~~~~~~g~D  299 (362)
                      +++.+|||+||+|.+|..+++.+...|.+|++++++..+.  ..+..+    ++..+ .|..+ +++.+.+...   ++|
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d   88 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA---QPQ   88 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH---CCS
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc---CCC
Confidence            7899999999999999999999888999999999875431  223222    22211 23333 2233333322   589


Q ss_pred             EEEECCChH-----------H-------HHHHHHHhcc---CCEEEEEcCccccc
Q 018013          300 IIYESVGGD-----------M-------FNLCLKALAV---YGRLIVIGMISQYQ  333 (362)
Q Consensus       300 vvid~~g~~-----------~-------~~~~~~~l~~---~G~~v~~G~~~~~~  333 (362)
                      +||++++..           .       ....++.+.+   .++||.+++.+.+.
T Consensus        89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g  143 (335)
T 1rpn_A           89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG  143 (335)
T ss_dssp             EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred             EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhC
Confidence            999998721           0       1123333333   37999998876554

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.19  E-value=0.0014  Score=58.70  Aligned_cols=98  Identities=19%  Similarity=0.213  Sum_probs=66.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ++|||+||+|.+|..+++.+...  |.+|++++++.++.+.+...++..+ .|..+.  .. +.... .++|+||++++.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~--~~-l~~~~-~~~d~vi~~a~~   76 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQP--ES-LQKAF-AGVSKLLFISGP   76 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCH--HH-HHHHT-TTCSEEEECCCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCH--HH-HHHHH-hcCCEEEEcCCC
Confidence            36999999999999999888877  8999999998777666655555433 233332  22 22222 358999999873


Q ss_pred             --------HHHHHHHHHhccC--CEEEEEcCcccc
Q 018013          308 --------DMFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       308 --------~~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                              ......++.++..  ++||.+++...+
T Consensus        77 ~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~  111 (287)
T 2jl1_A           77 HYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAE  111 (287)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGG
T ss_pred             CcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCC
Confidence                    1223444544443  499999887654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.19  E-value=0.0018  Score=60.13  Aligned_cols=102  Identities=18%  Similarity=0.174  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc----CCcEE-EeCCCc-cHHHHHHHHCCCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL----GVDRV-INYKAE-DIKTVFKEEFPKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~----g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvv  301 (362)
                      .+++|||+||+|.+|..+++.+...|.+|++++++..+...+. .+    ++..+ .|..+. .+.+.+...   ++|+|
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~v   84 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIV   84 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEE
Confidence            3678999999999999999998889999999998765433222 11    22222 233332 233333322   58999


Q ss_pred             EECCCh---H--------H-------HHHHHHHhc---cCCEEEEEcCccccc
Q 018013          302 YESVGG---D--------M-------FNLCLKALA---VYGRLIVIGMISQYQ  333 (362)
Q Consensus       302 id~~g~---~--------~-------~~~~~~~l~---~~G~~v~~G~~~~~~  333 (362)
                      |++++.   .        .       ....++.+.   ..++||.+++...|.
T Consensus        85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg  137 (357)
T 1rkx_A           85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYD  137 (357)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBC
T ss_pred             EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhC
Confidence            999882   0        0       012223222   246999999876543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=97.19  E-value=0.0016  Score=60.19  Aligned_cols=96  Identities=18%  Similarity=0.142  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCcc-HHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAED-IKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~-~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .++++|||+||+|.+|..+++.+...|++|++++++..+      .++..+ .|..+.+ +.+.+     .++|+||+++
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~-----~~~d~vih~A   85 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAI-----MGVSAVLHLG   85 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHH-----TTCSEEEECC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHH-----hCCCEEEECC
Confidence            567899999999999999999999999999999987654      234332 3333322 22222     2799999998


Q ss_pred             Ch-----H-----------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          306 GG-----D-----------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       306 g~-----~-----------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      +.     .           .....++.++..  ++||.+++.+.|..
T Consensus        86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~  132 (347)
T 4id9_A           86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPE  132 (347)
T ss_dssp             CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTT
T ss_pred             cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCC
Confidence            72     1           112344444433  59999998665543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.19  E-value=0.0021  Score=59.84  Aligned_cols=105  Identities=16%  Similarity=0.110  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH--CCCEEEEecCCHhHH-------------HHHHHcCCcEEEeCCCccHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKL--AGNTVVATCGGEHKA-------------QLLKELGVDRVINYKAEDIKTVFKE  292 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~--~G~~Vi~~~~~~~~~-------------~~l~~~g~~~v~~~~~~~~~~~~~~  292 (362)
                      -.+++|||+||+|.+|..+++.+..  .|++|++++++....             ..+...++ .++..+-.+.. .+..
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~-~~~~   85 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG-EVIAADINNPL-DLRR   85 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCS-EEEECCTTCHH-HHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCc-eEEECCCCCHH-HHHH
Confidence            3578999999999999999988888  899999999855311             11111122 22222222222 2222


Q ss_pred             HCCCceeEEEECCCh-H---------------HHHHHHHHh-ccCCEEEEEcCcccccC
Q 018013          293 EFPKGFDIIYESVGG-D---------------MFNLCLKAL-AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       293 ~~~~g~Dvvid~~g~-~---------------~~~~~~~~l-~~~G~~v~~G~~~~~~~  334 (362)
                      ....++|+||++++. .               ....+++.+ +.+++||.+++.+.+..
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGN  144 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCS
T ss_pred             hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCC
Confidence            334579999999882 1               111233333 34678999988665543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.16  E-value=0.0014  Score=59.88  Aligned_cols=99  Identities=19%  Similarity=0.281  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-cHHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAE-DIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      ++..+|||+||+|.+|..+++.+...|.+|++++++..+ +.   +++..+ .|..+. .+.+.+..   .++|+||+++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A   82 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVISD---IKPDYIFHLA   82 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHHH---HCCSEEEECC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHHh---cCCCEEEEcC
Confidence            677899999999999999999988899999999987654 21   233222 233332 23333322   3589999998


Q ss_pred             ChH-----------H-------HHHHHHHh---ccCCEEEEEcCccccc
Q 018013          306 GGD-----------M-------FNLCLKAL---AVYGRLIVIGMISQYQ  333 (362)
Q Consensus       306 g~~-----------~-------~~~~~~~l---~~~G~~v~~G~~~~~~  333 (362)
                      +..           .       ....++.+   +..++||.+++...+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g  131 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYG  131 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTB
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcC
Confidence            731           0       11222322   2368999999876554

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=97.15  E-value=0.0015  Score=60.19  Aligned_cols=100  Identities=20%  Similarity=0.148  Sum_probs=63.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      .+|||+||+|.+|..+++.+...|.+|++++++..+.+.+...++..+ .|..+  ... +.... .++|+||++++...
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~-~~~~~-~~~d~vih~a~~~~   89 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLD--HAG-LERAL-RGLDGVIFSAGYYP   89 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTC--HHH-HHHHT-TTCSEEEEC-----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCC--HHH-HHHHH-cCCCEEEECCccCc
Confidence            489999999999999999998899999999998765544433344332 23333  222 22222 35999999987310


Q ss_pred             ----------------HHHHHHHhcc-C-CEEEEEcCcccccC
Q 018013          310 ----------------FNLCLKALAV-Y-GRLIVIGMISQYQG  334 (362)
Q Consensus       310 ----------------~~~~~~~l~~-~-G~~v~~G~~~~~~~  334 (362)
                                      ....++.+.+ + ++||.+++...+..
T Consensus        90 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~  132 (342)
T 2x4g_A           90 SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPR  132 (342)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCc
Confidence                            1233343333 3 69999998776543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.14  E-value=0.00073  Score=59.67  Aligned_cols=78  Identities=23%  Similarity=0.312  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH----HHcCCc-EEE--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL----KELGVD-RVI--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l----~~~g~~-~v~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .+++++|+||+|++|..+++.+...|++|++++++ .++.+.+    ++.+.. .++  |..+ +++.+.+....  -++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999988899999999987 6655443    223433 222  3333 22333333221  136


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++|+++|
T Consensus        86 id~vi~~Ag   94 (258)
T 3afn_B           86 IDVLINNAG   94 (258)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.14  E-value=0.0016  Score=60.92  Aligned_cols=101  Identities=15%  Similarity=0.064  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH-cCCcEE-EeCC-Ccc-HHHHHHHHCCCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE-LGVDRV-INYK-AED-IKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~-~g~~~v-~~~~-~~~-~~~~~~~~~~~g~Dvvid  303 (362)
                      .+++|||+||+|.+|..+++.+... |.+|++++++.++...+.. .++..+ .|.. +.+ +.+.++     ++|+||+
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih   97 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILP   97 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEE
Confidence            3579999999999999999888776 8999999998766554433 233322 2333 222 222222     6999999


Q ss_pred             CCChH---H--------H-------HHHHHHhc-cCCEEEEEcCcccccC
Q 018013          304 SVGGD---M--------F-------NLCLKALA-VYGRLIVIGMISQYQG  334 (362)
Q Consensus       304 ~~g~~---~--------~-------~~~~~~l~-~~G~~v~~G~~~~~~~  334 (362)
                      +++..   .        +       ...++.++ .+.+||.+++.+.|..
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~  147 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGM  147 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBS
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCC
Confidence            88721   0        0       12333332 3379999998765543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.13  E-value=0.0022  Score=57.46  Aligned_cols=94  Identities=11%  Similarity=0.128  Sum_probs=68.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh--
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG--  307 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~--  307 (362)
                      .+|||+|+ |.+|..++..+...|.+|+++++++.+.+.+...++..+ .|..+.+         -.++|+||++++.  
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~---------~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS---------LDGVTHLLISTAPDS   75 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC---------CTTCCEEEECCCCBT
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc---------cCCCCEEEECCCccc
Confidence            58999997 999999999998889999999999988887777666433 2333211         3579999999873  


Q ss_pred             ---HHHHHHHHHhcc----CCEEEEEcCcccccC
Q 018013          308 ---DMFNLCLKALAV----YGRLIVIGMISQYQG  334 (362)
Q Consensus       308 ---~~~~~~~~~l~~----~G~~v~~G~~~~~~~  334 (362)
                         ......++.++.    -.+||.+++.+.+..
T Consensus        76 ~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~  109 (286)
T 3ius_A           76 GGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGD  109 (286)
T ss_dssp             TBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCC
T ss_pred             cccHHHHHHHHHHHhhcCCceEEEEeecceecCC
Confidence               233445555443    369999988765543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.12  E-value=0.0037  Score=49.85  Aligned_cols=76  Identities=22%  Similarity=0.288  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~  308 (362)
                      .++|+|.| .|.+|..+++.+...|.+|+++++++++.+.+++.|...+. .+..+ .+.++...-.++|+++.+++.+
T Consensus         6 ~~~v~I~G-~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~-gd~~~-~~~l~~~~~~~~d~vi~~~~~~   81 (141)
T 3llv_A            6 RYEYIVIG-SEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVI-ADPTD-ESFYRSLDLEGVSAVLITGSDD   81 (141)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-CCTTC-HHHHHHSCCTTCSEEEECCSCH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEE-CCCCC-HHHHHhCCcccCCEEEEecCCH
Confidence            46799999 59999999999999999999999999999988887765332 22222 1223333335799999999953

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.11  E-value=0.0015  Score=60.44  Aligned_cols=93  Identities=26%  Similarity=0.318  Sum_probs=62.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH----hHHHHH---HHcCCcEE-EeCCC-ccHHHHHHHHCCCceeE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE----HKAQLL---KELGVDRV-INYKA-EDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~----~~~~~l---~~~g~~~v-~~~~~-~~~~~~~~~~~~~g~Dv  300 (362)
                      ..+|||+||+|.+|..+++.+...|.+|++++++.    ++.+.+   ...++..+ .|..+ +++.+.++.   .++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCE
Confidence            46899999999999999999988999999999865    455433   33455433 33333 223333322   37999


Q ss_pred             EEECCCh---HHHHHHHHHhccCC---EEEE
Q 018013          301 IYESVGG---DMFNLCLKALAVYG---RLIV  325 (362)
Q Consensus       301 vid~~g~---~~~~~~~~~l~~~G---~~v~  325 (362)
                      ||.+++.   ......++.++..|   +|+.
T Consensus        87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           87 VVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            9999985   23345555555545   7764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.11  E-value=0.0045  Score=55.95  Aligned_cols=75  Identities=24%  Similarity=0.260  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc----CCc-EEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL----GVD-RVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~----g~~-~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      -+|++++|+|++|++|.+++..+...|++|+++.++.++.+.+. ++    ++. ...|..+.+   .+.... ..+|++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~---~~~~~~-~~~Dvl  192 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA---SRAEAV-KGAHFV  192 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHH---HHHHHT-TTCSEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHH---HHHHHH-HhCCEE
Confidence            57899999999999999999999999999999999988766553 22    332 334544322   111121 248999


Q ss_pred             EECCC
Q 018013          302 YESVG  306 (362)
Q Consensus       302 id~~g  306 (362)
                      ++|+|
T Consensus       193 Vn~ag  197 (287)
T 1lu9_A          193 FTAGA  197 (287)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99997

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.10  E-value=0.0038  Score=61.54  Aligned_cols=108  Identities=16%  Similarity=0.147  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEe-cCCH-------------h----HHHHHHHcCCcEE-E--eCCC-c
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVAT-CGGE-------------H----KAQLLKELGVDRV-I--NYKA-E  284 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~-~~~~-------------~----~~~~l~~~g~~~v-~--~~~~-~  284 (362)
                      ++++++||+||+|++|..+++.+...|++ ++.+ .++.             +    ..+.+++.|.... +  |..+ +
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            78999999999999999999888888986 6666 6662             2    2233455676532 2  3333 2


Q ss_pred             cHHHHHHHHC-CCceeEEEECCCh-----------HHHH---------------HHHHHhcc---CCEEEEEcCcccccC
Q 018013          285 DIKTVFKEEF-PKGFDIIYESVGG-----------DMFN---------------LCLKALAV---YGRLIVIGMISQYQG  334 (362)
Q Consensus       285 ~~~~~~~~~~-~~g~Dvvid~~g~-----------~~~~---------------~~~~~l~~---~G~~v~~G~~~~~~~  334 (362)
                      .+.+.+.... .+.+|+||+|+|-           +.++               .+...++.   .|+||.+++.....+
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            3334443332 2469999999882           1111               22223322   689999999887655


Q ss_pred             C
Q 018013          335 E  335 (362)
Q Consensus       335 ~  335 (362)
                      .
T Consensus       409 ~  409 (525)
T 3qp9_A          409 G  409 (525)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.10  E-value=0.0074  Score=55.84  Aligned_cols=103  Identities=16%  Similarity=0.071  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh----HHHHHHH-------cCCcEEEeCCCccHHHHHHHHCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH----KAQLLKE-------LGVDRVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~----~~~~l~~-------~g~~~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++..    +.+.+.+       .++ .++..+-.+.....+..  .+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~--~~  102 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF-KFIQGDIRNLDDCNNAC--AG  102 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTE-EEEECCTTSHHHHHHHH--TT
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCce-EEEECCCCCHHHHHHHh--cC
Confidence            4578999999999999999998888999999988542    3333321       122 22322222222221112  27


Q ss_pred             eeEEEECCChH------------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      +|+||++++..                  .....++.+.+.  ++||.+++...+..
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~  159 (352)
T 1sb8_A          103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGD  159 (352)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTT
T ss_pred             CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCC
Confidence            99999998821                  012233444332  69999988776544

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.08  E-value=0.006  Score=56.21  Aligned_cols=101  Identities=22%  Similarity=0.209  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH----------hHHHHHHH-cC--CcEE-EeCCCc-cHHHHHHHHC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE----------HKAQLLKE-LG--VDRV-INYKAE-DIKTVFKEEF  294 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~----------~~~~~l~~-~g--~~~v-~~~~~~-~~~~~~~~~~  294 (362)
                      +++|||+||+|.+|..+++.+...|.+|++++++.          +..+.+++ .+  +..+ .|..+. .+.+.+..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence            46899999999999999998888899999997632          23333433 23  2222 233332 23333322  


Q ss_pred             CCceeEEEECCChH------------------HHHHHHHHhccC--CEEEEEcCccccc
Q 018013          295 PKGFDIIYESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       295 ~~g~Dvvid~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                       .++|+||++++..                  ....+++.++..  ++||.+++...+.
T Consensus        80 -~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g  137 (348)
T 1ek6_A           80 -YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG  137 (348)
T ss_dssp             -CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred             -cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence             2799999998731                  011233444332  6999998876654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.07  E-value=0.0082  Score=55.88  Aligned_cols=98  Identities=15%  Similarity=0.134  Sum_probs=62.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH--HHHHHc-CCcEEEeCC-CccHHHHHHHHCCCceeEEEECC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA--QLLKEL-GVDRVINYK-AEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~--~~l~~~-g~~~v~~~~-~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      +++|+|+||+|.+|..+++.+...|.+|++++++.++.  +.+... ++. ++..+ -.+........  .++|+||.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~-~v~~D~l~d~~~l~~~~--~~~d~Vi~~a   81 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLF--EGAHLAFINT   81 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHH--TTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcE-EEECCccCCHHHHHHHH--hcCCEEEEcC
Confidence            57899999999999999988888899999999876654  334332 332 22222 12222221112  3589999877


Q ss_pred             ChH------HHHHHHHHhccC---CEEEEEcCcc
Q 018013          306 GGD------MFNLCLKALAVY---GRLIVIGMIS  330 (362)
Q Consensus       306 g~~------~~~~~~~~l~~~---G~~v~~G~~~  330 (362)
                      +..      .....++.++..   ++||.+++..
T Consensus        82 ~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           82 TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             CSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            531      224445544433   5999998875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.07  E-value=0.0022  Score=58.43  Aligned_cols=95  Identities=18%  Similarity=0.112  Sum_probs=54.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGD  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~  308 (362)
                      +++|||+||+|.+|..+++.+...|.+|++++++..+.      + ....|..+ +.+.+.+...   ++|+||++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~-~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~~   71 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP------K-FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAER   71 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------CHHHHHHH---CCSEEEECC---
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC------C-eEEecCCCHHHHHHHHHhh---CCCEEEECCccc
Confidence            57899999999999999999988999999999765431      1 11123222 2233333322   589999998731


Q ss_pred             H------------------HHHHHHHh-ccCCEEEEEcCcccccC
Q 018013          309 M------------------FNLCLKAL-AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       309 ~------------------~~~~~~~l-~~~G~~v~~G~~~~~~~  334 (362)
                      .                  ....++.+ +.+++||.+++...+..
T Consensus        72 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~  116 (315)
T 2ydy_A           72 RPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG  116 (315)
T ss_dssp             ----------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS
T ss_pred             ChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC
Confidence            1                  11233332 34679999988776543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=97.04  E-value=0.0013  Score=60.66  Aligned_cols=102  Identities=18%  Similarity=0.150  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH-HHHHHc-CCcEE-EeCCCc-cHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA-QLLKEL-GVDRV-INYKAE-DIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~-~~l~~~-g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.... +.+.++ ++..+ .|..+. .+.+.++.   ..+|+||++
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih~   96 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD---LQPDAVVHT   96 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEEC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc---cCCcEEEEC
Confidence            467999999999999999998888999999999864321 112111 22211 233332 22233321   249999999


Q ss_pred             CChH---------------HHHHHHHHhcc--CCEEEEEcCccccc
Q 018013          305 VGGD---------------MFNLCLKALAV--YGRLIVIGMISQYQ  333 (362)
Q Consensus       305 ~g~~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~  333 (362)
                      ++..               .....++.+.+  -++||.+++...+.
T Consensus        97 A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g  142 (333)
T 2q1w_A           97 AASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYG  142 (333)
T ss_dssp             CCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGC
T ss_pred             ceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence            8731               01233343333  36999999877654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=97.02  E-value=0.0057  Score=56.26  Aligned_cols=100  Identities=18%  Similarity=0.147  Sum_probs=60.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH--h---HHHHHHHcC-CcEE-EeCCCc-cHHHHHHHHCCCceeEEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE--H---KAQLLKELG-VDRV-INYKAE-DIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~--~---~~~~l~~~g-~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvi  302 (362)
                      ++|||+||+|.+|..+++.+...|.+|++++++.  .   ..+.+...+ +..+ .|..+. .+.+.+..   .++|+||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vi   78 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK---YMPDSCF   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc---cCCCEEE
Confidence            4799999999999999998888999999997632  1   122333333 2222 233332 23333332   2499999


Q ss_pred             ECCChH-----------H-------HHHHHHHhcc---CCEEEEEcCccccc
Q 018013          303 ESVGGD-----------M-------FNLCLKALAV---YGRLIVIGMISQYQ  333 (362)
Q Consensus       303 d~~g~~-----------~-------~~~~~~~l~~---~G~~v~~G~~~~~~  333 (362)
                      ++++..           .       ...+++.+.+   .|+||.+++...+.
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g  130 (347)
T 1orr_A           79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG  130 (347)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred             ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence            998831           0       1122232222   26999999876543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.02  E-value=0.0033  Score=54.96  Aligned_cols=72  Identities=21%  Similarity=0.193  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-cHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKELGVDRV-INYKAE-DIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+++|||+||+|++|..+++.+...  |++|+++++++++.+.+ ..++..+ .|..+. ++.+.+     .++|+||++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~-----~~~d~vi~~   76 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAF-----QGIDALVIL   76 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHH-----TTCSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHH-----cCCCEEEEe
Confidence            4689999999999999999988888  89999999987765543 1223322 333332 222222     258999999


Q ss_pred             CC
Q 018013          305 VG  306 (362)
Q Consensus       305 ~g  306 (362)
                      +|
T Consensus        77 a~   78 (253)
T 1xq6_A           77 TS   78 (253)
T ss_dssp             CC
T ss_pred             cc
Confidence            87

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.02  E-value=0.012  Score=52.50  Aligned_cols=102  Identities=19%  Similarity=0.230  Sum_probs=70.4

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHc-----C--Cc--EEEeCCCccHHHH
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKEL-----G--VD--RVINYKAEDIKTV  289 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~-----g--~~--~v~~~~~~~~~~~  289 (362)
                      .+.....+++++||-.| +| .|..+..+++..  +.+|++++.+++..+.+++.     |  .+  .++..+..+   .
T Consensus        91 i~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~---~  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD---S  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG---C
T ss_pred             HHHHcCCCCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh---c
Confidence            34444458999999998 44 788888888865  56999999999888777542     4  22  222221111   0


Q ss_pred             HHHHCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcCc
Q 018013          290 FKEEFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       290 ~~~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                        ......+|+|+.....  ..+..+.+.|+++|+++.+...
T Consensus       166 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  205 (280)
T 1i9g_A          166 --ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVAT  205 (280)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred             --CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence              0123569999986653  6889999999999999987543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.02  E-value=0.0041  Score=56.24  Aligned_cols=91  Identities=24%  Similarity=0.296  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-------hHHHHHH---HcCCcEE-EeCCCccHHHHHHHHCCCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-------HKAQLLK---ELGVDRV-INYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-------~~~~~l~---~~g~~~v-~~~~~~~~~~~~~~~~~~g~  298 (362)
                      +++|+|+||+|.+|..+++.+...|.+|++++++.       ++.+.++   ..++..+ .|..+.  .......  .++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~--~~l~~~~--~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH--ETLVKAI--KQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH--HHHHHHH--TTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH--HHHHHHH--hCC
Confidence            46799999999999999988888899999999876       5554443   3465433 344332  2222222  369


Q ss_pred             eEEEECCCh---HHHHHHHHHhccC---CEEE
Q 018013          299 DIIYESVGG---DMFNLCLKALAVY---GRLI  324 (362)
Q Consensus       299 Dvvid~~g~---~~~~~~~~~l~~~---G~~v  324 (362)
                      |+||++++.   ......++.++..   .+||
T Consensus        78 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           78 DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             SEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            999999884   2334445554433   4777

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.02  E-value=0.0062  Score=54.95  Aligned_cols=97  Identities=14%  Similarity=0.026  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHH--HHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKA--QLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~--~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .++|+|+||+|.+|..+++.+...| .+|+++++++++.  +.+...++..+ .|..+  ........  .++|+||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d--~~~l~~~~--~~~d~vi~~a   80 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDD--QVIMELAL--NGAYATFIVT   80 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTC--HHHHHHHH--TTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCC--HHHHHHHH--hcCCEEEEeC
Confidence            4789999999999999998888778 8999999986653  33444566433 23333  22222222  3599999998


Q ss_pred             ChH----------HHHHHHHHhccC--CEEEEEcCcc
Q 018013          306 GGD----------MFNLCLKALAVY--GRLIVIGMIS  330 (362)
Q Consensus       306 g~~----------~~~~~~~~l~~~--G~~v~~G~~~  330 (362)
                      +..          .....++.++..  ++||..+...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~  117 (299)
T 2wm3_A           81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLEN  117 (299)
T ss_dssp             CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred             CCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCcc
Confidence            831          223444444432  5888865544

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.02  E-value=0.0055  Score=52.35  Aligned_cols=100  Identities=15%  Similarity=0.245  Sum_probs=70.5

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~  294 (362)
                      +.....+++++||-.| +|. |..++.+++. +++|++++.+++..+.+++    .|..   .++..+..+   .+  ..
T Consensus        48 l~~l~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~--~~  119 (204)
T 3njr_A           48 LAALAPRRGELLWDIG-GGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA---AL--AD  119 (204)
T ss_dssp             HHHHCCCTTCEEEEET-CTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG---GG--TT
T ss_pred             HHhcCCCCCCEEEEec-CCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh---hc--cc
Confidence            4445558899999998 443 8888888888 8899999999998887754    4543   233332222   11  11


Q ss_pred             CCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcCc
Q 018013          295 PKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       295 ~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ...+|+|+...+.  +.++.+.+.|+++|+++.....
T Consensus       120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  156 (204)
T 3njr_A          120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT  156 (204)
T ss_dssp             SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence            2469999977552  3788999999999999987653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.00  E-value=0.0017  Score=61.35  Aligned_cols=79  Identities=19%  Similarity=0.189  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHhH----------------HHHHHHcCCcE-EE--eCCC-ccH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEHK----------------AQLLKELGVDR-VI--NYKA-EDI  286 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~~----------------~~~l~~~g~~~-v~--~~~~-~~~  286 (362)
                      ..++++||+||++|+|.+.++.+.. .|++|+++.++.++                .+.+++.|... .+  |..+ +++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            6789999999999999998887777 89999988764332                12345566542 22  3333 223


Q ss_pred             HHHHH---HHCCCceeEEEECCCh
Q 018013          287 KTVFK---EEFPKGFDIIYESVGG  307 (362)
Q Consensus       287 ~~~~~---~~~~~g~Dvvid~~g~  307 (362)
                      .+.+.   +.. +++|+++|++|.
T Consensus       125 ~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          125 QLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEEcCcc
Confidence            33332   233 469999999874

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.97  E-value=0.0082  Score=56.45  Aligned_cols=36  Identities=25%  Similarity=0.146  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-HCCCEEEEecCCHh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCGGEH  265 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~-~~G~~Vi~~~~~~~  265 (362)
                      +.+|||+||+|.+|..+++.+. ..|++|++++++..
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            4589999999999999998887 89999999987643

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.95  E-value=0.0017  Score=57.90  Aligned_cols=94  Identities=11%  Similarity=-0.018  Sum_probs=70.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .++.+||..| +|. |..+..+++.. |++|++++.+++..+.+++.+.. .++..+..++.     ...+.+|+|+...
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~~~~  156 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP-----FSDTSMDAIIRIY  156 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-----BCTTCEEEEEEES
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-----CCCCceeEEEEeC
Confidence            6788999998 566 88888999876 78999999999999988876543 33322222110     1235699999766


Q ss_pred             ChHHHHHHHHHhccCCEEEEEcC
Q 018013          306 GGDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       306 g~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ....+..+.+.|+++|+++....
T Consensus       157 ~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          157 APCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             CCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             ChhhHHHHHHhcCCCcEEEEEEc
Confidence            66778999999999999988753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.91  E-value=0.0076  Score=54.60  Aligned_cols=91  Identities=19%  Similarity=0.270  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-----HhHHHHHH---HcCCcEE-EeCCCccHHHHHHHHCCCceeE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-----EHKAQLLK---ELGVDRV-INYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-----~~~~~~l~---~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++     +++.+.++   ..++..+ .|..+  ........  .++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~l~~~~--~~~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD--HQRLVDAL--KQVDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC--HHHHHHHH--TTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCC--HHHHHHHH--hCCCE
Confidence            4679999999999999999988889999999997     44544443   2344322 23333  22222222  36999


Q ss_pred             EEECCChH-------HHHHHHHHhccCC---EEE
Q 018013          301 IYESVGGD-------MFNLCLKALAVYG---RLI  324 (362)
Q Consensus       301 vid~~g~~-------~~~~~~~~l~~~G---~~v  324 (362)
                      ||++++..       .....++.++..|   +||
T Consensus        80 vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           80 VISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             EEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             EEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            99998731       2344555555444   887

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.91  E-value=0.0075  Score=52.31  Aligned_cols=101  Identities=9%  Similarity=0.141  Sum_probs=70.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +++.+||=.|  .|.|..++.+++..  +++|++++.+++..+.+++    .|.. .-+.....+..+.+.....+.+|+
T Consensus        55 ~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~  132 (221)
T 3dr5_A           55 NGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQL  132 (221)
T ss_dssp             TTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred             CCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCe
Confidence            5566999887  46788889999976  5799999999988777753    4543 112222233334333332467999


Q ss_pred             EEECCCh----HHHHHHHHHhccCCEEEEEcCcc
Q 018013          301 IYESVGG----DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       301 vid~~g~----~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ||-....    ..++.+.+.|++||.++.-....
T Consensus       133 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~  166 (221)
T 3dr5_A          133 VFGQVSPMDLKALVDAAWPLLRRGGALVLADALL  166 (221)
T ss_dssp             EEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred             EEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence            9876542    47889999999999999865544

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.91  E-value=0.0011  Score=61.37  Aligned_cols=105  Identities=17%  Similarity=0.173  Sum_probs=67.6

Q ss_pred             HHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cC------------Cc-EEE
Q 018013          219 SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LG------------VD-RVI  279 (362)
Q Consensus       219 ~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g------------~~-~v~  279 (362)
                      ...+..+..++|++||-.| +|. |..++.+++..|  .+|++++.+++..+.+++    +|            .. .++
T Consensus        95 ~~~l~~l~~~~g~~VLDiG-~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~  172 (336)
T 2b25_A           95 NMILSMMDINPGDTVLEAG-SGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  172 (336)
T ss_dssp             HHHHHHHTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HHHHHhcCCCCCCEEEEeC-CCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence            3344555558999999998 444 778888888766  699999999988777754    11            11 222


Q ss_pred             eCCCccHHHHHHHHCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcC
Q 018013          280 NYKAEDIKTVFKEEFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       280 ~~~~~~~~~~~~~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ..+..+..   .....+.+|+|+-....  ..+..+.++|+++|+++.+..
T Consensus       173 ~~d~~~~~---~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          173 HKDISGAT---EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             ESCTTCCC----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ECChHHcc---cccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            22211110   01112359999876553  468899999999999997654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.88  E-value=0.002  Score=59.26  Aligned_cols=104  Identities=15%  Similarity=0.102  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHH-HHHHc-CCcE-EEeCCCc-cHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ-LLKEL-GVDR-VINYKAE-DIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~-~l~~~-g~~~-v~~~~~~-~~~~~~~~~~~~g~Dvvid  303 (362)
                      -.+.+|||+||+|.+|..+++.+...|++|++++++..+.. .++.+ ++.. ..|..+. ++.+.+...   ++|+||+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih   94 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH   94 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence            35689999999999999999988888999999998543221 11112 1211 1233332 233333322   6999999


Q ss_pred             CCChH------H---------HHHHHHHhc-c-CCEEEEEcCcccccC
Q 018013          304 SVGGD------M---------FNLCLKALA-V-YGRLIVIGMISQYQG  334 (362)
Q Consensus       304 ~~g~~------~---------~~~~~~~l~-~-~G~~v~~G~~~~~~~  334 (362)
                      ++|..      .         ....++.+. . .++||.+++...+..
T Consensus        95 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~  142 (330)
T 2pzm_A           95 SAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGR  142 (330)
T ss_dssp             CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCS
T ss_pred             CCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCC
Confidence            98721      0         112233332 2 369999998776644

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.88  E-value=0.0053  Score=56.14  Aligned_cols=90  Identities=20%  Similarity=0.173  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|+| .|.+|..+++.++.+|++|++.+++.++ +.+.+.|+...      ++.+.+.     ..|+|+.++..
T Consensus       140 l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~------~l~ell~-----~aDvV~l~~p~  206 (307)
T 1wwk_A          140 LEGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV------DLETLLK-----ESDVVTIHVPL  206 (307)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC------CHHHHHH-----HCSEEEECCCC
T ss_pred             cCCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc------CHHHHHh-----hCCEEEEecCC
Confidence            3578999999 7999999999999999999999998776 55667776421      3444432     47999999773


Q ss_pred             -----HHH-HHHHHHhccCCEEEEEcCcc
Q 018013          308 -----DMF-NLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -----~~~-~~~~~~l~~~G~~v~~G~~~  330 (362)
                           ..+ ...+..|+++..+|.++.-+
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lin~arg~  235 (307)
T 1wwk_A          207 VESTYHLINEERLKLMKKTAILINTSRGP  235 (307)
T ss_dssp             STTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred             ChHHhhhcCHHHHhcCCCCeEEEECCCCc
Confidence                 122 45778899999999998743

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.84  E-value=0.015  Score=56.60  Aligned_cols=107  Identities=13%  Similarity=0.189  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhH-------HHHHHHcCCcE-EE--eCCC-ccHHHHHHHHC-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHK-------AQLLKELGVDR-VI--NYKA-EDIKTVFKEEF-  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~-------~~~l~~~g~~~-v~--~~~~-~~~~~~~~~~~-  294 (362)
                      ++++++||+||+|++|..+++.+...|+ +|+.+.++...       .+.+++.|... ++  |..+ +.+.+.+.... 
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            7889999999999999999888877898 59999887531       23345566642 22  3333 23334443331 


Q ss_pred             CCceeEEEECCCh-----------HHHH-----------HHHHHhcc--CCEEEEEcCcccccC
Q 018013          295 PKGFDIIYESVGG-----------DMFN-----------LCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       295 ~~g~Dvvid~~g~-----------~~~~-----------~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                      .+.+|+||++.|.           +.+.           ...+.+.+  .++||.+++.....+
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g  367 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG  367 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCC
Confidence            2468999999882           1111           22333433  489999998765444

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.83  E-value=0.0059  Score=56.85  Aligned_cols=37  Identities=19%  Similarity=0.253  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK  266 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~  266 (362)
                      +++|||+||+|.+|..+++.+...|++|++++++..+
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            3689999999999999999888889999999987653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.81  E-value=0.0034  Score=56.38  Aligned_cols=90  Identities=17%  Similarity=0.166  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++.++|||+||+|.+|..+++.+...|.+|++++++.              .|..+ +.+.+.++..   ++|+||++++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------------~Dl~d~~~~~~~~~~~---~~d~vih~A~   72 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------LDITNVLAVNKFFNEK---KPNVVINCAA   72 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------CCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc--------------CCCCCHHHHHHHHHhc---CCCEEEECCc
Confidence            6789999999999999999999988899999998851              12332 2233333222   6899999987


Q ss_pred             hHH------------------HHHHHHHhc-cCCEEEEEcCcccccC
Q 018013          307 GDM------------------FNLCLKALA-VYGRLIVIGMISQYQG  334 (362)
Q Consensus       307 ~~~------------------~~~~~~~l~-~~G~~v~~G~~~~~~~  334 (362)
                      ...                  ....++.+. .+.+||.+++...+..
T Consensus        73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~  119 (292)
T 1vl0_A           73 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDG  119 (292)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCS
T ss_pred             cCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECC
Confidence            210                  122333333 3459999988765543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.79  E-value=0.0036  Score=57.59  Aligned_cols=98  Identities=14%  Similarity=0.042  Sum_probs=62.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH-cCCcEE-EeCCC-cc-HHHHHHHHCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE-LGVDRV-INYKA-ED-IKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~-~g~~~v-~~~~~-~~-~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .+|||+||+|.+|..+++.+... |.+|++++++.++.+.+.. .++..+ .|..+ .+ +.+.+.     ++|+||+++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A   75 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLV   75 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECB
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEcc
Confidence            37999999999999999988887 8999999998765443321 122222 23333 22 333322     689999997


Q ss_pred             Ch--H----------------HHHHHHHHh-ccCCEEEEEcCccccc
Q 018013          306 GG--D----------------MFNLCLKAL-AVYGRLIVIGMISQYQ  333 (362)
Q Consensus       306 g~--~----------------~~~~~~~~l-~~~G~~v~~G~~~~~~  333 (362)
                      +.  .                .....++.+ +.+++||.+++.+.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g  122 (345)
T 2bll_A           76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG  122 (345)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred             cccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcC
Confidence            62  0                011233333 2348999999876554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.78  E-value=0.0083  Score=54.68  Aligned_cols=91  Identities=15%  Similarity=0.178  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH------hHHHHH---HHcCCcEE-EeCCCccHHHHHHHHCCCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE------HKAQLL---KELGVDRV-INYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~------~~~~~l---~~~g~~~v-~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.      ++.+.+   ...++..+ .|..+  ........  .++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d--~~~l~~a~--~~~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE--HEKMVSVL--KQVD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTC--HHHHHHHH--TTCS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCC--HHHHHHHH--cCCC
Confidence            46799999999999999999888899999999875      344433   23455433 34433  22222222  3599


Q ss_pred             EEEECCCh---HHHHHHHHHhccC---CEEE
Q 018013          300 IIYESVGG---DMFNLCLKALAVY---GRLI  324 (362)
Q Consensus       300 vvid~~g~---~~~~~~~~~l~~~---G~~v  324 (362)
                      +||++++.   ......++.++..   ++||
T Consensus        80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           80 IVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            99999984   2334455555443   4787

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=96.78  E-value=0.0022  Score=58.21  Aligned_cols=100  Identities=14%  Similarity=0.080  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-cHHHHHHHHCCCceeEEEECC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKELGVDRV-INYKAE-DIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      +++|||+||+|.+|..+++.+...  |.+|++++++..+.+...  ++..+ .|..+. .+.+.++.   .++|+||+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~---~~~d~vih~a   76 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDFNQIEHLVEV---HKITDIYLMA   76 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCHHHHHHHHHH---TTCCEEEECC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCHHHHHHHHhh---cCCCEEEECC
Confidence            467999999999999999887776  789999988765533222  33322 333332 23333322   2699999998


Q ss_pred             ChH-----------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          306 GGD-----------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       306 g~~-----------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      +..                 .....++.+++.  ++||.+++...+..
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~  124 (312)
T 2yy7_A           77 ALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGP  124 (312)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCT
T ss_pred             ccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCC
Confidence            731                 011334444443  48999888765543

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.76  E-value=0.002  Score=56.06  Aligned_cols=95  Identities=16%  Similarity=0.214  Sum_probs=66.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHC-CCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEF-PKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~-~~g~  298 (362)
                      .++++||-.| +| .|..+..+++.. +.+|++++.+++..+.+++    .|..   .++..+..+   .+.... .+.+
T Consensus        53 ~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~~~~f  127 (233)
T 2gpy_A           53 AAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQ---LGEKLELYPLF  127 (233)
T ss_dssp             HCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGG---SHHHHTTSCCE
T ss_pred             cCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH---HHHhcccCCCc
Confidence            5788999998 44 788888899887 5799999999988887764    3542   222222121   111121 3569


Q ss_pred             eEEEECCC----hHHHHHHHHHhccCCEEEEEc
Q 018013          299 DIIYESVG----GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       299 Dvvid~~g----~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      |+|+.+..    ...++.+.+.|+++|+++...
T Consensus       128 D~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          128 DVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             EEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             cEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            99998765    256788889999999998863

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.74  E-value=0.014  Score=49.51  Aligned_cols=102  Identities=9%  Similarity=0.121  Sum_probs=71.2

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHH
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEE  293 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~  293 (362)
                      .+.....+++++||-.| +| .|..++.+++..+ .+|++++.+++..+.+++    .|.+  .++..+..+.   .  .
T Consensus        32 ~l~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~--~  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIG-AG-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG---L--D  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT---C--T
T ss_pred             HHHHcCCCCCCEEEEEC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh---h--h
Confidence            34445558899999998 44 4888888888853 699999999998887754    3543  2332222110   0  0


Q ss_pred             CCCceeEEEECCC----hHHHHHHHHHhccCCEEEEEcCc
Q 018013          294 FPKGFDIIYESVG----GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       294 ~~~g~Dvvid~~g----~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ....+|+|+.+..    ...++.+.+.|+++|+++.....
T Consensus       105 ~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  144 (204)
T 3e05_A          105 DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT  144 (204)
T ss_dssp             TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred             cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence            1145999998765    36788999999999999987543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.72  E-value=0.0046  Score=58.05  Aligned_cols=101  Identities=14%  Similarity=0.163  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++..+.......++..+ .|..+  ........  .++|+||++++.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~--~~~d~Vih~A~~  103 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRV--MENCLKVT--EGVDHVFNLAAD  103 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTS--HHHHHHHH--TTCSEEEECCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCC--HHHHHHHh--CCCCEEEECcee
Confidence            45799999999999999999888889999999987654322222233322 23333  22221112  369999999872


Q ss_pred             H------------H-------HHHHHHHhccC--CEEEEEcCccccc
Q 018013          308 D------------M-------FNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       308 ~------------~-------~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                      .            .       ....++.++..  ++||.+++...+.
T Consensus       104 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~  150 (379)
T 2c5a_A          104 MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP  150 (379)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSC
T ss_pred             cCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeC
Confidence            0            0       11334444433  5999998876544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.72  E-value=0.0079  Score=54.37  Aligned_cols=90  Identities=21%  Similarity=0.267  Sum_probs=58.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC------HhHHHHHH---HcCCcEE-EeCCCc-cHHHHHHHHCCCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG------EHKAQLLK---ELGVDRV-INYKAE-DIKTVFKEEFPKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~------~~~~~~l~---~~g~~~v-~~~~~~-~~~~~~~~~~~~g~  298 (362)
                      .++|+|+||+|.+|..+++.+...|.+|++++++      +++.+.++   ..|+..+ .|..+. ++.+.+     .++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~-----~~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV-----KNV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH-----HTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHH-----cCC
Confidence            4679999999999999999998899999999986      34444333   3455432 233332 222222     259


Q ss_pred             eEEEECCChH---HHHHHHHHhccC---CEEE
Q 018013          299 DIIYESVGGD---MFNLCLKALAVY---GRLI  324 (362)
Q Consensus       299 Dvvid~~g~~---~~~~~~~~l~~~---G~~v  324 (362)
                      |+||++++..   .....++.++..   ++||
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9999999842   233444444332   4787

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.70  E-value=0.0076  Score=49.62  Aligned_cols=101  Identities=24%  Similarity=0.382  Sum_probs=70.1

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH----cCCc-E-EEeCCCccHHHHHHHHC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE----LGVD-R-VINYKAEDIKTVFKEEF  294 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~----~g~~-~-v~~~~~~~~~~~~~~~~  294 (362)
                      +.....+++++||-.| +| .|..+..+++.. +++|++++.+++..+.+++    .+.. . .+..+..+   .+. ..
T Consensus        18 ~~~~~~~~~~~vldiG-~G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~-~~   91 (178)
T 3hm2_A           18 ISALAPKPHETLWDIG-GG-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR---AFD-DV   91 (178)
T ss_dssp             HHHHCCCTTEEEEEES-TT-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG---GGG-GC
T ss_pred             HHHhcccCCCeEEEeC-CC-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh---hhh-cc
Confidence            4445558899999998 44 488888888876 5699999999988887764    4543 2 22222111   111 11


Q ss_pred             CCceeEEEECCCh---HHHHHHHHHhccCCEEEEEcC
Q 018013          295 PKGFDIIYESVGG---DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       295 ~~g~Dvvid~~g~---~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ...+|+|+.+...   ..++.+.+.|+++|+++....
T Consensus        92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             CSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            2569999977653   478999999999999997654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.68  E-value=0.0074  Score=59.23  Aligned_cols=104  Identities=15%  Similarity=0.238  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhH-------HHHHHHcCCcE-EE--eCCC-ccHHHHHHHHCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHK-------AQLLKELGVDR-VI--NYKA-EDIKTVFKEEFP  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~-------~~~l~~~g~~~-v~--~~~~-~~~~~~~~~~~~  295 (362)
                      ++++++||+||+|++|..++..+...|+ +|+.+.++..+       .+.+++.|... ++  |..+ +.+.+.+..   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            6889999999999999999988888999 68888887531       23344456542 22  3333 223333333   


Q ss_pred             CceeEEEECCCh-----------HHHH-----------HHHHHhc---cCCEEEEEcCcccccC
Q 018013          296 KGFDIIYESVGG-----------DMFN-----------LCLKALA---VYGRLIVIGMISQYQG  334 (362)
Q Consensus       296 ~g~Dvvid~~g~-----------~~~~-----------~~~~~l~---~~G~~v~~G~~~~~~~  334 (362)
                      ..+|+||++.|.           +.++           ...+.+.   ..++||.+++.....+
T Consensus       334 ~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g  397 (511)
T 2z5l_A          334 YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWG  397 (511)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTC
T ss_pred             CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCC
Confidence            569999999872           1111           1223333   4589999988765443

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.67  E-value=0.0045  Score=54.53  Aligned_cols=99  Identities=23%  Similarity=0.231  Sum_probs=70.1

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcE--EEeCCCccHHHHHHHHC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDR--VINYKAEDIKTVFKEEF  294 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~--v~~~~~~~~~~~~~~~~  294 (362)
                      .....+++++||-.| +| .|..+..+++..  +.+|++++.+++..+.+++    .|...  .+..  .++.+.   ..
T Consensus        87 ~~~~~~~~~~vldiG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~---~~  159 (255)
T 3mb5_A           87 AYAGISPGDFIVEAG-VG-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL--KDIYEG---IE  159 (255)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC--SCGGGC---CC
T ss_pred             HhhCCCCCCEEEEec-CC-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE--Cchhhc---cC
Confidence            334448999999998 44 388888888885  5699999999888877754    35431  1211  121111   22


Q ss_pred             CCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcC
Q 018013          295 PKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       295 ~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ...+|+|+.....  ..++.+.+.|+++|+++....
T Consensus       160 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  195 (255)
T 3mb5_A          160 EENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP  195 (255)
T ss_dssp             CCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence            3569999988774  589999999999999998754

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=96.67  E-value=0.011  Score=54.01  Aligned_cols=98  Identities=15%  Similarity=0.230  Sum_probs=61.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc--CCcEE-EeCCCc-cHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL--GVDRV-INYKAE-DIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~--g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .+|||+||+|.+|..+++.+...|.+|++++++..+..  +.+  ++..+ .|..+. .+.+.++.   .++|+||++++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~d~vih~a~   76 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNGDLRDKAFLRDVFTQ---ENIEAVMHFAA   76 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEECCTTCHHHHHHHHHH---SCEEEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEECCCCCHHHHHHHHhh---cCCCEEEECCc
Confidence            47999999999999999999889999999987543211  111  23222 233332 23333322   37999999987


Q ss_pred             hH------------------HHHHHHHHhccC--CEEEEEcCccccc
Q 018013          307 GD------------------MFNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       307 ~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                      ..                  .....++.++..  ++||.+++...+.
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~  123 (330)
T 2c20_A           77 DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYG  123 (330)
T ss_dssp             CCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGC
T ss_pred             ccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeC
Confidence            21                  011233334333  6999999876654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=96.64  E-value=0.0024  Score=57.96  Aligned_cols=98  Identities=14%  Similarity=0.120  Sum_probs=60.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      .+|||+||+|.+|..+++.+...|.+|++++++.++.......+...+ .|..+.+    +..... + |+||++++.. 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~----~~~~~~-~-d~vih~A~~~~   74 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS----WGAGIK-G-DVVFHFAANPE   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT----TTTTCC-C-SEEEECCSSCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH----HHhhcC-C-CEEEECCCCCC
Confidence            379999999999999999999999999999986554332222223222 2333322    222222 3 9999998720 


Q ss_pred             ----------H-------HHHHHHHhcc--CCEEEEEcCcccccC
Q 018013          309 ----------M-------FNLCLKALAV--YGRLIVIGMISQYQG  334 (362)
Q Consensus       309 ----------~-------~~~~~~~l~~--~G~~v~~G~~~~~~~  334 (362)
                                .       ....++.++.  .++||.+++...+..
T Consensus        75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~  119 (312)
T 3ko8_A           75 VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGD  119 (312)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCS
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCC
Confidence                      1       1123333332  359999998776543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.63  E-value=0.0099  Score=54.11  Aligned_cols=90  Identities=20%  Similarity=0.187  Sum_probs=59.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHHHH---HHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQLL---KELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~~l---~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      ++|+|+||+|.+|..+++.+...|.+|++++++.. +.+.+   ...++..+ .|..+  ........  .++|+||+++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d--~~~l~~a~--~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDE--HEKLVELM--KKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTC--HHHHHHHH--TTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCC--HHHHHHHH--cCCCEEEECC
Confidence            47999999999999999999889999999998764 33333   34565433 34333  22222222  3599999999


Q ss_pred             Ch---HHHHHHHHHhccC---CEEE
Q 018013          306 GG---DMFNLCLKALAVY---GRLI  324 (362)
Q Consensus       306 g~---~~~~~~~~~l~~~---G~~v  324 (362)
                      +.   ......++.++..   ++||
T Consensus        88 ~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           88 AFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             CGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             chhhhHHHHHHHHHHHhcCCCCEEE
Confidence            84   2234455554433   4776

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=96.61  E-value=0.0086  Score=54.87  Aligned_cols=98  Identities=15%  Similarity=0.111  Sum_probs=58.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCH--hHHHHHHHc--CCc-EEE--eCCCc-cHHHHHHHHCCCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGE--HKAQLLKEL--GVD-RVI--NYKAE-DIKTVFKEEFPKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~--~~~~~l~~~--g~~-~v~--~~~~~-~~~~~~~~~~~~g~D  299 (362)
                      +.+|||+||+|.+|..+++.+...|  .+|++++++.  .+.+.+.++  +.. .++  |..+. .+.+.+     .++|
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~d   77 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV-----RKVD   77 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH-----HTCS
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh-----hCCC
Confidence            4579999999999999988777776  8999998753  112222222  111 222  33332 122222     4699


Q ss_pred             EEEECCChH-----------H-------HHHHHHHhc---cCCEEEEEcCcccc
Q 018013          300 IIYESVGGD-----------M-------FNLCLKALA---VYGRLIVIGMISQY  332 (362)
Q Consensus       300 vvid~~g~~-----------~-------~~~~~~~l~---~~G~~v~~G~~~~~  332 (362)
                      +||++++..           .       ....++.+.   ..++||.+++...+
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vy  131 (336)
T 2hun_A           78 GVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVY  131 (336)
T ss_dssp             EEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGG
T ss_pred             EEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHH
Confidence            999998731           0       112223222   23799999986543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.59  E-value=0.0051  Score=57.50  Aligned_cols=35  Identities=17%  Similarity=0.260  Sum_probs=31.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      ++|||+||+|.+|..+++.+...|++|++++++..
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence            68999999999999999998889999999998654

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.59  E-value=0.0016  Score=57.07  Aligned_cols=101  Identities=17%  Similarity=0.082  Sum_probs=68.7

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC----c-EEEeCCCccHHHHHHHHCCCc
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV----D-RVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~----~-~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      .+....+|.+||-+| + |.|..+..+++..+.+|++++.+++-.+.+++...    . .++.   .+............
T Consensus        54 a~~~~~~G~rVLdiG-~-G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~---~~a~~~~~~~~~~~  128 (236)
T 3orh_A           54 AAAASSKGGRVLEVG-F-GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPTLPDGH  128 (236)
T ss_dssp             HHHHTTTCEEEEEEC-C-TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGGSCTTC
T ss_pred             HHhhccCCCeEEEEC-C-CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEe---ehHHhhcccccccC
Confidence            333347899999999 3 45788888888777899999999998888875332    2 2222   23333333334456


Q ss_pred             eeEE-EECCCh-----------HHHHHHHHHhccCCEEEEEcC
Q 018013          298 FDII-YESVGG-----------DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       298 ~Dvv-id~~g~-----------~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      +|.| +|....           ..++++.++|+|||+|+.+..
T Consensus       129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~  171 (236)
T 3orh_A          129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL  171 (236)
T ss_dssp             EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred             CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEec
Confidence            8887 454321           356788999999999998753

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.57  E-value=0.013  Score=52.46  Aligned_cols=86  Identities=16%  Similarity=0.179  Sum_probs=63.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      +++++|.| +|++|.+++..+...|.+|+++.|+.+|.+.+.++++. .....+.           ..+|+||||+... 
T Consensus       118 ~k~vlvlG-aGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~~l-----------~~~DiVInaTp~Gm  184 (269)
T 3phh_A          118 YQNALILG-AGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEPPK-----------SAFDLIINATSASL  184 (269)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSCCS-----------SCCSEEEECCTTCC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHHHh-----------ccCCEEEEcccCCC
Confidence            89999999 69999999999999999999999999988776677753 3333221           1689999997631 


Q ss_pred             ----HHH--HHHHHhccCCEEEEEcC
Q 018013          309 ----MFN--LCLKALAVYGRLIVIGM  328 (362)
Q Consensus       309 ----~~~--~~~~~l~~~G~~v~~G~  328 (362)
                          .+.  .....++++..++++-.
T Consensus       185 ~~~~~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          185 HNELPLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             CCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCCCCCChHHHHhhCCCCCEEEEeCC
Confidence                121  22236778888887754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.56  E-value=0.01  Score=57.96  Aligned_cols=106  Identities=20%  Similarity=0.218  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHh-------HHHHHHHcCCcEEE---eCCC-ccHHHHHHHHCC-C
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEH-------KAQLLKELGVDRVI---NYKA-EDIKTVFKEEFP-K  296 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~-------~~~~l~~~g~~~v~---~~~~-~~~~~~~~~~~~-~  296 (362)
                      ++++||+||+|++|..+++.+...|+ +|+.+.++..       ..+.+++.|....+   |..+ +.+.+.+..... .
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            39999999999999999988888999 7888887532       22334556765332   3333 234444443322 4


Q ss_pred             ceeEEEECCChH------------HHH-----------HHHHHhc--cCCEEEEEcCcccccCC
Q 018013          297 GFDIIYESVGGD------------MFN-----------LCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       297 g~Dvvid~~g~~------------~~~-----------~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ++|+||++.|..            .++           .+.+.+.  ..++||.+++.....+.
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~  382 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS  382 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC
Confidence            699999998721            111           2233333  34799999987765443

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.56  E-value=0.012  Score=54.78  Aligned_cols=56  Identities=23%  Similarity=0.290  Sum_probs=44.9

Q ss_pred             HHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcE
Q 018013          221 ALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDR  277 (362)
Q Consensus       221 al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~  277 (362)
                      ++...+.  -.|++|.|.| .|.+|+.+++.++.+|++|++++.+..+.++.+++|+..
T Consensus       164 ~~~~~G~~~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          164 TVAHRGLGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             HHHHTTCCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE
T ss_pred             HHHhcCCCCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEE
Confidence            4455553  5799999998 799999999999999999999988877655566677643

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=96.55  E-value=0.021  Score=52.34  Aligned_cols=98  Identities=16%  Similarity=0.243  Sum_probs=60.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCC----HhHHHHHHHc-CCc-EEE--eCCCc-cHHHHHHHHCCCceeEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG----EHKAQLLKEL-GVD-RVI--NYKAE-DIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~----~~~~~~l~~~-g~~-~v~--~~~~~-~~~~~~~~~~~~g~Dvvi  302 (362)
                      +|||+||+|.+|..+++.+...|++|+++++.    .+..+.+.+. +.. .++  |..+. .+.+.++.   .++|+||
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~D~vi   78 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD---HAIDTVI   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc---cCCCEEE
Confidence            69999999999999999888899999998642    2233333332 321 222  33332 23333322   2699999


Q ss_pred             ECCCh----HH--------------HHHHHHHhcc--CCEEEEEcCcccc
Q 018013          303 ESVGG----DM--------------FNLCLKALAV--YGRLIVIGMISQY  332 (362)
Q Consensus       303 d~~g~----~~--------------~~~~~~~l~~--~G~~v~~G~~~~~  332 (362)
                      +++|.    ..              ...+++.++.  .++||.+++...+
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~  128 (338)
T 1udb_A           79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVY  128 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG
T ss_pred             ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHh
Confidence            99872    10              1123333332  3699999887654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.55  E-value=0.008  Score=50.92  Aligned_cols=100  Identities=22%  Similarity=0.336  Sum_probs=64.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEE--eCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVI--NYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~--~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++++|+||+|++|..+++.+...  +|+++++++++.+.+. +++. ..+  |..+ +++.+.+..  .+++|++|+++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag   75 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAVG   75 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCC
Confidence            47999999999999988777655  9999999988776664 3433 333  2222 223333332  247999999987


Q ss_pred             hH-----------HHH-----------HHHHHhc--cCCEEEEEcCcccccCC
Q 018013          307 GD-----------MFN-----------LCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       307 ~~-----------~~~-----------~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      ..           .++           .+.+.+.  ..|+||.+++...+.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~  128 (207)
T 2yut_A           76 KAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV  128 (207)
T ss_dssp             CCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS
T ss_pred             cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC
Confidence            21           111           1223332  34899999998776553

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.54  E-value=0.0061  Score=51.93  Aligned_cols=95  Identities=14%  Similarity=0.142  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHH--HHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTV--FKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~--~~~~~~~g~Dvvid~  304 (362)
                      .+++|+|+||+|.+|..+++.+...|.  +|+++++++++    .  ... + .....|+.+.  +.+.  - +|+||++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~--~~~-~-~~~~~D~~~~~~~~~~--~-~d~vi~~   72 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----E--HPR-L-DNPVGPLAELLPQLDG--S-IDTAFCC   72 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----C--CTT-E-ECCBSCHHHHGGGCCS--C-CSEEEEC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----c--CCC-c-eEEeccccCHHHHHHh--h-hcEEEEC
Confidence            357899999999999999999999998  99999987664    1  111 1 1111233221  1111  1 8999999


Q ss_pred             CChH----------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          305 VGGD----------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       305 ~g~~----------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      +|..                .....++.+.+.  ++||.+++...+..
T Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~  120 (215)
T 2a35_A           73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK  120 (215)
T ss_dssp             CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT
T ss_pred             eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC
Confidence            8731                112333444333  58999998877653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=96.53  E-value=0.00075  Score=61.47  Aligned_cols=96  Identities=11%  Similarity=0.079  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh----HHHHHHHcCCcEEEeCCCcc-HHHHHHHHCCCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH----KAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~----~~~~l~~~g~~~v~~~~~~~-~~~~~~~~~~~g~Dvvid  303 (362)
                      .+++|||+||+|.+|..+++.+...|.+|++++++..    +.+.     ........... +...   .  .++|+||+
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~~~D---l--~~~d~vi~   75 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEG-----TGKFLEKPVLELEERD---L--SDVRLVYH   75 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTT-----SSEEECSCGGGCCHHH---H--TTEEEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhh-----hhhhccCCCeeEEeCc---c--ccCCEEEE
Confidence            3679999999999999999999989999999998754    1111     11222111111 1111   1  17999999


Q ss_pred             CCChH-----------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          304 SVGGD-----------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       304 ~~g~~-----------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      +++..                 .....++.++..  .+||.+++...+..
T Consensus        76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~  125 (321)
T 3vps_A           76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQ  125 (321)
T ss_dssp             CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCS
T ss_pred             CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCC
Confidence            98731                 112344444433  59999988765543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=96.53  E-value=0.016  Score=56.33  Aligned_cols=40  Identities=20%  Similarity=0.226  Sum_probs=34.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEecCCHhHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA---GNTVVATCGGEHKA  267 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~---G~~Vi~~~~~~~~~  267 (362)
                      ..+++|||+||+|.+|..+++.+...   |.+|+++++++.+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            67899999999999999988777666   89999999976543

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.53  E-value=0.0027  Score=55.45  Aligned_cols=100  Identities=22%  Similarity=0.246  Sum_probs=67.5

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCcE--EEeCCCccHHHHHHHHCC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVDR--VINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~~--v~~~~~~~~~~~~~~~~~  295 (362)
                      +.....+++++||-.| +| .|..+..+++..+.+|++++.+++..+.+++    .|...  +...+   .....  ...
T Consensus        84 ~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~--~~~  156 (235)
T 1jg1_A           84 LEIANLKPGMNILEVG-TG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD---GSKGF--PPK  156 (235)
T ss_dssp             HHHHTCCTTCCEEEEC-CT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC---GGGCC--GGG
T ss_pred             HHhcCCCCCCEEEEEe-CC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC---cccCC--CCC
Confidence            3334448899999998 44 7888889998877899999999888777754    45432  22211   10000  112


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcC
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ..+|+|+.+..- ...+.+.+.|+++|+++..-.
T Consensus       157 ~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          157 APYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            359999987663 445678899999999876533

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.53  E-value=0.008  Score=56.30  Aligned_cols=101  Identities=14%  Similarity=0.084  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHH-HHH-HcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQ-LLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~-~l~-~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .+.+|||+||+|.+|..+++.+...| .+|++++++..+.. .+. ..++ .++..+-.+.. .+.... .++|+||+++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v-~~~~~Dl~d~~-~l~~~~-~~~d~Vih~A  107 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAV-RFSETSITDDA-LLASLQ-DEYDYVFHLA  107 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTE-EEECSCTTCHH-HHHHCC-SCCSEEEECC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCce-EEEECCCCCHH-HHHHHh-hCCCEEEECC
Confidence            46789999999999999999998899 99999998754321 111 0111 22222212222 222222 3799999998


Q ss_pred             ChH------------------HHHHHHHHhccC---CEEEEEcCcccc
Q 018013          306 GGD------------------MFNLCLKALAVY---GRLIVIGMISQY  332 (362)
Q Consensus       306 g~~------------------~~~~~~~~l~~~---G~~v~~G~~~~~  332 (362)
                      +..                  .....++.++..   ++||.+++...+
T Consensus       108 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vy  155 (377)
T 2q1s_A          108 TYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSI  155 (377)
T ss_dssp             CCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC---
T ss_pred             CccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHc
Confidence            731                  122344555544   599999887644

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.50  E-value=0.0052  Score=54.09  Aligned_cols=101  Identities=18%  Similarity=0.110  Sum_probs=70.8

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHc-----CCcE--EEeCCCccHHHHHH
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKEL-----GVDR--VINYKAEDIKTVFK  291 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~-----g~~~--v~~~~~~~~~~~~~  291 (362)
                      .+.....+++++||-.| +| .|..+..+++..  +.+|++++.+++..+.+++.     |.+.  +...+..+   .  
T Consensus        88 ~~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~--  160 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAG-TG-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE---A--  160 (258)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG---C--
T ss_pred             HHHHcCCCCCCEEEEEC-CC-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh---c--
Confidence            33444448999999998 44 488888888885  56999999999888887643     6332  22221111   0  


Q ss_pred             HHCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcC
Q 018013          292 EEFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       292 ~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ....+.+|+|+.....  ..+..+.+.|+++|+++.+..
T Consensus       161 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  199 (258)
T 2pwy_A          161 ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP  199 (258)
T ss_dssp             CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            0123469999987663  688999999999999998754

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.49  E-value=0.015  Score=52.10  Aligned_cols=97  Identities=14%  Similarity=0.102  Sum_probs=63.9

Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC--c-EEEeCCCccHHHHHHHHCCC
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV--D-RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~--~-~v~~~~~~~~~~~~~~~~~~  296 (362)
                      |..... -++++++|+|+ |++|.++++.+...|++|+++.++.++.+.+. +++.  . .+.+.  ++    +.  . +
T Consensus       110 L~~~~~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~--~~----~~--~-~  179 (271)
T 1nyt_A          110 LERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM--DE----LE--G-H  179 (271)
T ss_dssp             HHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS--GG----GT--T-C
T ss_pred             HHhcCcCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH--HH----hc--c-C
Confidence            444333 46889999995 89999999999999999999999988876654 4443  1 11111  11    11  1 5


Q ss_pred             ceeEEEECCChHHHHH----HHHHhccCCEEEEEcC
Q 018013          297 GFDIIYESVGGDMFNL----CLKALAVYGRLIVIGM  328 (362)
Q Consensus       297 g~Dvvid~~g~~~~~~----~~~~l~~~G~~v~~G~  328 (362)
                      ++|++++|++......    -...++++..++++..
T Consensus       180 ~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          180 EFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             CCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            7999999998533210    1233566667777654

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.48  E-value=0.0031  Score=54.00  Aligned_cols=99  Identities=26%  Similarity=0.252  Sum_probs=67.7

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~  294 (362)
                      .....+++++||..| +| .|..+..+++..|  .+|++++.+++..+.+++    .+..  .+...+   .....  ..
T Consensus        71 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~--~~  143 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIG-TG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD---GTLGY--EP  143 (215)
T ss_dssp             HHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC---GGGCC--GG
T ss_pred             HhhCCCCCCEEEEEC-CC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC---cccCC--CC
Confidence            334448899999998 44 5888889998876  799999999888777754    3443  222221   11100  11


Q ss_pred             CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcC
Q 018013          295 PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ...+|+|+.+..- ...+.+.+.|+++|+++..-.
T Consensus       144 ~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          144 LAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            3469999988663 344688899999999887643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.48  E-value=0.032  Score=50.32  Aligned_cols=99  Identities=19%  Similarity=0.147  Sum_probs=63.3

Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcC-----CcEEEeCCCccHHHHHHHH
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELG-----VDRVINYKAEDIKTVFKEE  293 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g-----~~~v~~~~~~~~~~~~~~~  293 (362)
                      |..... -.+++++|+| +|++|.+++..+...|+ +|+++.++.++.+.+. +++     .. +.....+++.+.+.  
T Consensus       118 l~~~~~~l~~k~vlVlG-aGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~-i~~~~~~~l~~~l~--  193 (283)
T 3jyo_A          118 MEEGLPNAKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREA-VVGVDARGIEDVIA--  193 (283)
T ss_dssp             HHHHCTTCCCSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCC-EEEECSTTHHHHHH--
T ss_pred             HHHhCcCcCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCce-EEEcCHHHHHHHHh--
Confidence            444443 5789999999 59999999999888999 7999999998877653 322     22 21112234444332  


Q ss_pred             CCCceeEEEECCChHHH-----HHHHHHhccCCEEEEEc
Q 018013          294 FPKGFDIIYESVGGDMF-----NLCLKALAVYGRLIVIG  327 (362)
Q Consensus       294 ~~~g~Dvvid~~g~~~~-----~~~~~~l~~~G~~v~~G  327 (362)
                         .+|+|+||+.-.+.     ......++++..++++-
T Consensus       194 ---~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv  229 (283)
T 3jyo_A          194 ---AADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV  229 (283)
T ss_dssp             ---HSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred             ---cCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence               48999999863111     11234566666555553

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.48  E-value=0.016  Score=52.79  Aligned_cols=93  Identities=18%  Similarity=0.251  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc----CCc---EEEeCCCccHHHHHHHHCCCcee
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL----GVD---RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~----g~~---~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      .+++++||-.| +|. |..+..+++..|++|++++.+++..+.+++.    |..   .++..+-.+       . .+.+|
T Consensus        88 ~~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~-~~~fD  157 (318)
T 2fk8_A           88 LKPGMTLLDIG-CGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED-------F-AEPVD  157 (318)
T ss_dssp             CCTTCEEEEES-CTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG-------C-CCCCS
T ss_pred             CCCcCEEEEEc-ccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH-------C-CCCcC
Confidence            38899999998 443 8888888887799999999999988887642    432   222221111       1 25699


Q ss_pred             EEEEC-----CC----hHHHHHHHHHhccCCEEEEEcCc
Q 018013          300 IIYES-----VG----GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       300 vvid~-----~g----~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +|+.+     .+    ...++.+.+.|+++|+++.....
T Consensus       158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            99976     33    24678889999999999876543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.47  E-value=0.026  Score=53.06  Aligned_cols=38  Identities=16%  Similarity=0.076  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      ..+.+|||+||+|.+|..++..+...|.+|+++++...
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            67899999999999999999888888999999987543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=96.46  E-value=0.0055  Score=56.48  Aligned_cols=104  Identities=15%  Similarity=0.112  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCH--hHHHHHHHc----CCcEE-EeCCCc-cHHHHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGE--HKAQLLKEL----GVDRV-INYKAE-DIKTVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~--~~~~~l~~~----g~~~v-~~~~~~-~~~~~~~~~~~~g  297 (362)
                      ..+.+|||+||+|.+|..+++.+...|  .+|++.++..  ...+.+..+    ++..+ .|..+. .+.+.+.   +.+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~~   98 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIK---ERD   98 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH---HHT
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHh---hcC
Confidence            456899999999999999999888888  6888877643  122222222    22221 233332 2233332   235


Q ss_pred             eeEEEECCChH------------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      +|+||++++..                  .....++.++..  ++||.+++.+.+..
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~  155 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGS  155 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCC
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCC
Confidence            99999998721                  112344444444  48999988665443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=96.46  E-value=0.019  Score=52.64  Aligned_cols=99  Identities=19%  Similarity=0.219  Sum_probs=58.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC---C---CEEEEecCCHh--HHHHHHHc--CCc-EEEeCCCccHHHHHHHHCCCceeE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA---G---NTVVATCGGEH--KAQLLKEL--GVD-RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~---G---~~Vi~~~~~~~--~~~~l~~~--g~~-~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +|||+||+|.+|..+++.+...   |   .+|++++++..  +.+.++.+  +.. .++..+-.+.. .+.... .++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~-~~~d~   79 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAG-LLAREL-RGVDA   79 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHH-HHHHHT-TTCCE
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHH-HHHHHh-cCCCE
Confidence            6999999999999999888775   7   89999987531  11222222  111 22222222222 222222 57999


Q ss_pred             EEECCChH------------------HHHHHHHHhccC--CEEEEEcCcccc
Q 018013          301 IYESVGGD------------------MFNLCLKALAVY--GRLIVIGMISQY  332 (362)
Q Consensus       301 vid~~g~~------------------~~~~~~~~l~~~--G~~v~~G~~~~~  332 (362)
                      ||++++..                  .....++.+.+.  ++||.+++.+.+
T Consensus        80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vy  131 (337)
T 1r6d_A           80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVY  131 (337)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGG
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHh
Confidence            99998721                  111333444333  599999886544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=96.45  E-value=0.0076  Score=53.39  Aligned_cols=92  Identities=14%  Similarity=0.182  Sum_probs=59.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-cHHHHHHHHCCCceeEEEECCChH--
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGD--  308 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~--  308 (362)
                      +|||+||+|++|..+++.+. .|.+|++++++++..     .+  ...|..+. ++.+.++..   ++|+||+++|..  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG--YKLDLTDFPRLEDFIIKK---RPDVIINAAAMTDV   70 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC--EECCTTSHHHHHHHHHHH---CCSEEEECCCCCCH
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC--ceeccCCHHHHHHHHHhc---CCCEEEECCcccCh
Confidence            58999999999999998877 489999999876421     12  33444442 233333322   589999998731  


Q ss_pred             ----------------HHHHHHHHh-ccCCEEEEEcCcccccC
Q 018013          309 ----------------MFNLCLKAL-AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       309 ----------------~~~~~~~~l-~~~G~~v~~G~~~~~~~  334 (362)
                                      .....++.+ +.+++||.+++...+..
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~  113 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDG  113 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCS
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcC
Confidence                            011233333 34679999998776543

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.45  E-value=0.026  Score=49.87  Aligned_cols=97  Identities=19%  Similarity=0.225  Sum_probs=66.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      .+++++||-.| +|. |..++.+++ .|++|++++.++...+.+++    .+..  +.....++.+.   .....+|+|+
T Consensus       118 ~~~~~~VLDiG-cG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~---~~~~~fD~Vv  189 (254)
T 2nxc_A          118 LRPGDKVLDLG-TGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA---LPFGPFDLLV  189 (254)
T ss_dssp             CCTTCEEEEET-CTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH---GGGCCEEEEE
T ss_pred             cCCCCEEEEec-CCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc---CcCCCCCEEE
Confidence            36789999998 443 666776666 57799999999888777754    3443  11112233332   2235699999


Q ss_pred             ECCCh----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          303 ESVGG----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       303 d~~g~----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .+.-.    ..+..+.++|+++|+++..+....
T Consensus       190 ~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~~  222 (254)
T 2nxc_A          190 ANLYAELHAALAPRYREALVPGGRALLTGILKD  222 (254)
T ss_dssp             EECCHHHHHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred             ECCcHHHHHHHHHHHHHHcCCCCEEEEEeeccC
Confidence            76542    467788899999999999876543

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.44  E-value=0.0074  Score=52.73  Aligned_cols=99  Identities=16%  Similarity=0.186  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHH-C------
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEE-F------  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~-~------  294 (362)
                      .++++||-.| +| .|..+..+++..  +.+|++++.+++..+.+++    .|....+.....+..+.+... .      
T Consensus        59 ~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~  136 (239)
T 2hnk_A           59 SGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS  136 (239)
T ss_dssp             HTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred             hCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence            5788999998 33 688888999987  5799999999988777754    354311111112333322221 1      


Q ss_pred             -------C-CceeEEEECCCh----HHHHHHHHHhccCCEEEEEcC
Q 018013          295 -------P-KGFDIIYESVGG----DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       295 -------~-~g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~  328 (362)
                             + +.+|+|+.....    ..++.+.+.|+++|+++....
T Consensus       137 ~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  182 (239)
T 2hnk_A          137 WASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNV  182 (239)
T ss_dssp             GGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             ccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence                   2 569999987663    567888999999999997643

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.44  E-value=0.007  Score=54.88  Aligned_cols=97  Identities=14%  Similarity=0.077  Sum_probs=69.5

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~~  295 (362)
                      .....+++++||-.| +| .|..+..+++..|++|++++.+++..+.+++    .|..   .++..+-.+       . .
T Consensus        66 ~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------~-~  135 (302)
T 3hem_A           66 DKLNLEPGMTLLDIG-CG-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-------F-D  135 (302)
T ss_dssp             HTTCCCTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-------C-C
T ss_pred             HHcCCCCcCEEEEee-cc-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH-------c-C
Confidence            334448999999999 44 5888899999888999999999988877754    3432   222222111       1 4


Q ss_pred             CceeEEEECCC----------------hHHHHHHHHHhccCCEEEEEcCc
Q 018013          296 KGFDIIYESVG----------------GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       296 ~g~Dvvid~~g----------------~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +.+|+|+.+..                ...++.+.+.|+++|+++.....
T Consensus       136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            67999987532                25678889999999999986654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.41  E-value=0.053  Score=42.48  Aligned_cols=93  Identities=14%  Similarity=0.175  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~  308 (362)
                      +.+|+|+| +|.+|..+++.+...|.+|+++++++++.+.+++ ++...+ ..+..+.. .+....-.++|+|+.+++.+
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~-~~d~~~~~-~l~~~~~~~~d~vi~~~~~~   80 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVI-NGDCTKIK-TLEDAGIEDADMYIAVTGKE   80 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEE-ESCTTSHH-HHHHTTTTTCSEEEECCSCH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEE-EcCCCCHH-HHHHcCcccCCEEEEeeCCc
Confidence            46899998 5999999999998899999999999888877764 566433 22222222 22222235699999999864


Q ss_pred             HH----HHHHHHhccCCEEEEE
Q 018013          309 MF----NLCLKALAVYGRLIVI  326 (362)
Q Consensus       309 ~~----~~~~~~l~~~G~~v~~  326 (362)
                      ..    ....+.+.+ ++++..
T Consensus        81 ~~~~~~~~~~~~~~~-~~ii~~  101 (140)
T 1lss_A           81 EVNLMSSLLAKSYGI-NKTIAR  101 (140)
T ss_dssp             HHHHHHHHHHHHTTC-CCEEEE
T ss_pred             hHHHHHHHHHHHcCC-CEEEEE
Confidence            32    223334444 366543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.40  E-value=0.035  Score=50.82  Aligned_cols=101  Identities=20%  Similarity=0.175  Sum_probs=64.3

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCC---HhHHHHHH-H----cCCc-EEEeCCC-ccHHH
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGG---EHKAQLLK-E----LGVD-RVINYKA-EDIKT  288 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~---~~~~~~l~-~----~g~~-~v~~~~~-~~~~~  288 (362)
                      +|..... -.+++++|+| +|++|.+++..+...|+ +|+++.++   .++.+.+. +    .+.. .+++..+ +++.+
T Consensus       144 ~L~~~~~~l~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~  222 (315)
T 3tnl_A          144 ALKEAGHDIIGKKMTICG-AGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK  222 (315)
T ss_dssp             HHHHTTCCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHcCCCccCCEEEEEC-CChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh
Confidence            4444444 5789999999 59999999999999999 89999999   77766553 2    2332 3344443 22332


Q ss_pred             HHHHHCCCceeEEEECCChHHHH------H-HHHHhccCCEEEEEc
Q 018013          289 VFKEEFPKGFDIIYESVGGDMFN------L-CLKALAVYGRLIVIG  327 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~g~~~~~------~-~~~~l~~~G~~v~~G  327 (362)
                      .+     ..+|+||+++.-.+..      . ....++++..++++-
T Consensus       223 ~l-----~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv  263 (315)
T 3tnl_A          223 EI-----AESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVV  263 (315)
T ss_dssp             HH-----HTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred             hh-----cCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence            22     2489999998632110      1 234456665555553

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.40  E-value=0.014  Score=53.48  Aligned_cols=89  Identities=13%  Similarity=0.103  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|+| .|.+|..+++.++..|++|++.+++.++. .+++.|+..      .++.+.+.     ..|+|+.++..
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~------~~l~ell~-----~aDvVvl~~P~  206 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA------VSLEELLK-----NSDVISLHVTV  206 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE------CCHHHHHH-----HCSEEEECCCC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee------cCHHHHHh-----hCCEEEEeccC
Confidence            4688999999 89999999999999999999999987764 456777642      13444433     47999998873


Q ss_pred             H-----HH-HHHHHHhccCCEEEEEcCc
Q 018013          308 D-----MF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 ~-----~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                      .     .+ ...+..|++++.+|.++.-
T Consensus       207 ~~~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          207 SKDAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             CTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             ChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence            1     22 4667889999999988773

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.39  E-value=0.004  Score=53.08  Aligned_cols=99  Identities=16%  Similarity=0.087  Sum_probs=67.0

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~  295 (362)
                      +.....+++++||-.| +| .|..+..+++. +.+|++++.+++..+.+++    .|..  .++..+...   ..  ...
T Consensus        70 ~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~--~~~  141 (210)
T 3lbf_A           70 TELLELTPQSRVLEIG-TG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ---GW--QAR  141 (210)
T ss_dssp             HHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---CC--GGG
T ss_pred             HHhcCCCCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCccc---CC--ccC
Confidence            3344448899999998 44 57788888887 8899999999988877754    3543  222222111   00  113


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEEcC
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ..+|+|+.+..- ...+.+.+.|+++|+++..-.
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             CCccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence            569999987653 344578899999999887533

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.39  E-value=0.0081  Score=55.59  Aligned_cols=89  Identities=11%  Similarity=0.048  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|.| .|.+|..+++.++.+|++|++.+++..+ +.+.+.|+..      .++.+.+     ...|+|+.++..
T Consensus       163 l~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~------~~l~ell-----~~aDvV~l~~P~  229 (335)
T 2g76_A          163 LNGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ------LPLEEIW-----PLCDFITVHTPL  229 (335)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE------CCHHHHG-----GGCSEEEECCCC
T ss_pred             CCcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee------CCHHHHH-----hcCCEEEEecCC
Confidence            3578999999 8999999999999999999999987665 4566777642      1343332     247999998773


Q ss_pred             H-----HH-HHHHHHhccCCEEEEEcCc
Q 018013          308 D-----MF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 ~-----~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                      .     .+ ...++.|++++.+|.+|.-
T Consensus       230 t~~t~~li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          230 LPSTTGLLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             CTTTTTSBCHHHHTTSCTTEEEEECSCT
T ss_pred             CHHHHHhhCHHHHhhCCCCcEEEECCCc
Confidence            1     22 4678889999999998873

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.39  E-value=0.031  Score=50.02  Aligned_cols=88  Identities=16%  Similarity=0.074  Sum_probs=63.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCC-ceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPK-GFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~-g~Dvvid~~g  306 (362)
                      .+|.|+| .|.+|.+.++.++..|.  +|+++++++++.+.+++.|.. ...+    +..+.+     . +.|+||.|+.
T Consensus         2 ~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~----~~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT----SIAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES----CGGGGG-----GTCCSEEEECSC
T ss_pred             cEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC----CHHHHh-----cCCCCEEEEcCC
Confidence            3689999 89999999999998898  999999999998888888864 2221    111111     3 5899999998


Q ss_pred             hHHH----HHHHHHhccCCEEEEEcC
Q 018013          307 GDMF----NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       307 ~~~~----~~~~~~l~~~G~~v~~G~  328 (362)
                      ....    ......++++..++.++.
T Consensus        72 ~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            6433    334445667777776654

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.38  E-value=0.011  Score=50.94  Aligned_cols=98  Identities=20%  Similarity=0.189  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHC--C-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEF--P-  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~--~-  295 (362)
                      .++++||-.| + |.|..++.+++..  +.+|++++.+++..+.+++    .|..   .++.   .+..+.+....  + 
T Consensus        68 ~~~~~vLdiG-~-G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~~~~~~~~~~  142 (229)
T 2avd_A           68 IQAKKALDLG-T-FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDELLAAGE  142 (229)
T ss_dssp             TTCCEEEEEC-C-TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHTTC
T ss_pred             cCCCEEEEEc-C-CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE---cCHHHHHHHHHhcCC
Confidence            5778999998 3 3788888898876  5699999999888777754    3542   2222   23333322221  1 


Q ss_pred             -CceeEEEECCCh----HHHHHHHHHhccCCEEEEEcCcc
Q 018013          296 -KGFDIIYESVGG----DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       296 -~g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +.+|+|+-....    ..++.+.++|+++|.++......
T Consensus       143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~  182 (229)
T 2avd_A          143 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLW  182 (229)
T ss_dssp             TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence             569998876442    57889999999999999876543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=96.38  E-value=0.0046  Score=57.94  Aligned_cols=36  Identities=19%  Similarity=0.246  Sum_probs=32.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK  266 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~  266 (362)
                      ++|||+||+|.+|..+++.+...|.+|++++++..+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~   64 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN   64 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence            689999999999999999988899999999987543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.38  E-value=0.032  Score=52.17  Aligned_cols=93  Identities=16%  Similarity=0.149  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      ..+|+|.|+ |.+|..+++.+.. ..+|.+.+++.++.+.+++......+|..+  ..+.....  .+.|+|++|++.. 
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d--~~~l~~~~--~~~DvVi~~~p~~~   89 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASN--FDKLVEVM--KEFELVIGALPGFL   89 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTC--HHHHHHHH--TTCSEEEECCCGGG
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCC--HHHHHHHH--hCCCEEEEecCCcc
Confidence            357999995 9999998887753 468999999998888876643333344443  22222222  3589999999964 


Q ss_pred             HHHHHHHHhccCCEEEEEcC
Q 018013          309 MFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       309 ~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ....+-.|+..+=.++++..
T Consensus        90 ~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             cchHHHHHHhcCcceEeeec
Confidence            34556677888889998753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.34  E-value=0.018  Score=66.72  Aligned_cols=107  Identities=16%  Similarity=0.203  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhH-------HHHHHHcCCcEEE---eCCC-ccHHHHHHHHC-C
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHK-------AQLLKELGVDRVI---NYKA-EDIKTVFKEEF-P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~-------~~~l~~~g~~~v~---~~~~-~~~~~~~~~~~-~  295 (362)
                      ++++++|+||+||+|.++++.+...|++ |+.+.++..+       .+.+++.|....+   |..+ +++.+.+.... -
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999996 7777776432       1223345664332   2222 22333333221 2


Q ss_pred             CceeEEEECCChH---H-----------------------HHHHHHHhccCCEEEEEcCcccccCC
Q 018013          296 KGFDIIYESVGGD---M-----------------------FNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       296 ~g~Dvvid~~g~~---~-----------------------~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +.+|++|+++|-.   .                       .+.+...+.+.|+||.+++..+..+.
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~ 2028 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN 2028 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC
Confidence            4699999999821   0                       01233455667999999998765543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.34  E-value=0.033  Score=51.80  Aligned_cols=90  Identities=12%  Similarity=0.130  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|..+++.++.+|++|++.+++. +.+.+.+.|+..+     .++.+.+.     ..|+|+.++.. 
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~-----~~l~ell~-----~aDiV~l~~Plt  226 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVA-----ESKDALFE-----QSDVLSVHLRLN  226 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEEC-----SSHHHHHH-----HCSEEEECCCCS
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEe-----CCHHHHHh-----hCCEEEEeccCc
Confidence            478999999 89999999999999999999999875 4455666776421     24444443     37999998762 


Q ss_pred             -H----HHHHHHHHhccCCEEEEEcCcc
Q 018013          308 -D----MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -~----~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +    .-...+..|+++..||.++.-+
T Consensus       227 ~~t~~li~~~~l~~mk~gailIN~aRg~  254 (352)
T 3gg9_A          227 DETRSIITVADLTRMKPTALFVNTSRAE  254 (352)
T ss_dssp             TTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             HHHHHhhCHHHHhhCCCCcEEEECCCch
Confidence             1    2246778899999999998643

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.33  E-value=0.009  Score=52.06  Aligned_cols=101  Identities=17%  Similarity=0.234  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHC--C--Cc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEF--P--KG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~--~--~g  297 (362)
                      .++++||-.| + |.|..++.+++..  +.+|++++.+++..+.+++    .|...-+.....+..+.+....  +  +.
T Consensus        71 ~~~~~vLdiG-~-G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~  148 (232)
T 3cbg_A           71 TGAKQVLEIG-V-FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE  148 (232)
T ss_dssp             HTCCEEEEEC-C-TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred             cCCCEEEEec-C-CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence            4677999998 3 4788888999876  5699999999988777753    3543111111223333333321  2  56


Q ss_pred             eeEEEECCCh----HHHHHHHHHhccCCEEEEEcCcc
Q 018013          298 FDIIYESVGG----DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       298 ~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +|+||-....    ..++.+.+.|+++|.++.-....
T Consensus       149 fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~  185 (232)
T 3cbg_A          149 FDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLW  185 (232)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred             cCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence            9999955442    56888999999999999865543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.31  E-value=0.025  Score=54.83  Aligned_cols=93  Identities=17%  Similarity=0.224  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH-cCCcE-EEeCCCc-cHHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE-LGVDR-VINYKAE-DIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~-~g~~~-v~~~~~~-~~~~~~~~~~~~g~Dvvid~  304 (362)
                      .+++|+|+|+ |++|.+++..+... |.+|++++++.++.+.+.+ .+... .+|..+. ++.+.+     .++|+|++|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l-----~~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVL-----ADNDVVISL   95 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHH-----HTSSEEEEC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHH-----cCCCEEEEC
Confidence            4678999995 99999999888877 6799999999888777654 34432 2333332 222222     258999999


Q ss_pred             CChHH-HHHHHHHhccCCEEEEEc
Q 018013          305 VGGDM-FNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       305 ~g~~~-~~~~~~~l~~~G~~v~~G  327 (362)
                      ++... ......+++.+-.++...
T Consensus        96 tp~~~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEEECS
T ss_pred             CchhhhHHHHHHHHhcCCEEEEee
Confidence            99542 223445666766776653

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.30  E-value=0.024  Score=51.90  Aligned_cols=91  Identities=13%  Similarity=-0.001  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ..+|.|+| .|.+|...++.++..|.  +|++.++++++.+.+++.|+. ...+...+.   .     -.+.|+||.|+.
T Consensus        33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~---~-----~~~aDvVilavp  103 (314)
T 3ggo_A           33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV---E-----DFSPDFVMLSSP  103 (314)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGG---G-----GGCCSEEEECSC
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHH---h-----hccCCEEEEeCC
Confidence            37899999 89999999999999998  999999999999988888863 332211110   1     135789999988


Q ss_pred             hH----HHHHHHHHhccCCEEEEEcCc
Q 018013          307 GD----MFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       307 ~~----~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ..    .+......++++..++.++..
T Consensus       104 ~~~~~~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHHHHHHhhccCCCcEEEECCCC
Confidence            53    344455566777777776654

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.30  E-value=0.013  Score=49.36  Aligned_cols=97  Identities=16%  Similarity=0.196  Sum_probs=66.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCC-c--EEEeCCCccHHHHHHHHCCCc
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGV-D--RVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~-~--~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      .+++++||-.| +| .|..+..+++..+  .+|++++.+++..+.+++    .|. +  .++..+..++.    ....+.
T Consensus        20 ~~~~~~vLDlG-cG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~   93 (197)
T 3eey_A           20 VKEGDTVVDAT-CG-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD----KYIDCP   93 (197)
T ss_dssp             CCTTCEEEESC-CT-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG----GTCCSC
T ss_pred             CCCCCEEEEcC-CC-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh----hhccCC
Confidence            37889999988 33 3778888888754  699999999988877754    344 1  22322212211    122357


Q ss_pred             eeEEEECCCh----------------HHHHHHHHHhccCCEEEEEcCc
Q 018013          298 FDIIYESVGG----------------DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       298 ~Dvvid~~g~----------------~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +|+|+-+.+-                ..++.+.+.|+++|+++.+...
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~  141 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY  141 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence            9999866521                4788999999999999987543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=96.30  E-value=0.0037  Score=58.02  Aligned_cols=105  Identities=15%  Similarity=0.157  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHc-CCcEEEeCCCcc-HHHHHHHHCCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKEL-GVDRVINYKAED-IKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~-g~~~v~~~~~~~-~~~~~~~~~~~g~Dvvid~~  305 (362)
                      ++.+|||+||+|.+|..+++.+...| .+|++++++..+.. +..+ +.....|..+.+ +...++....+++|+||+++
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A  123 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG  123 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECC
Confidence            45789999999999999999988889 89999988654321 1111 111111222111 11221110112699999998


Q ss_pred             ChH----------------HHHHHHHHhcc-CCEEEEEcCcccccC
Q 018013          306 GGD----------------MFNLCLKALAV-YGRLIVIGMISQYQG  334 (362)
Q Consensus       306 g~~----------------~~~~~~~~l~~-~G~~v~~G~~~~~~~  334 (362)
                      +..                .....++.+.+ +.+||.+++...+..
T Consensus       124 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~  169 (357)
T 2x6t_A          124 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGG  169 (357)
T ss_dssp             SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCS
T ss_pred             cccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCC
Confidence            721                11233443333 339999988765543

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.30  E-value=0.02  Score=50.32  Aligned_cols=96  Identities=19%  Similarity=0.157  Sum_probs=68.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc----EEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD----RVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~----~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      .+++.+||-.| + |.|..+..+++..|++|++++.+++..+.+++....    .++..+..++     ....+.+|+|+
T Consensus        53 ~~~~~~vLdiG-~-G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~  125 (266)
T 3ujc_A           53 LNENSKVLDIG-S-GLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK-----EFPENNFDLIY  125 (266)
T ss_dssp             CCTTCEEEEET-C-TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC-----CCCTTCEEEEE
T ss_pred             CCCCCEEEEEC-C-CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC-----CCCCCcEEEEe
Confidence            37899999998 3 378888888887799999999999999888765421    2222221111     01235799999


Q ss_pred             ECCCh---------HHHHHHHHHhccCCEEEEEcCc
Q 018013          303 ESVGG---------DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       303 d~~g~---------~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      .+..-         ..++.+.+.|+++|+++.....
T Consensus       126 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  161 (266)
T 3ujc_A          126 SRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC  161 (266)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence            86431         3578889999999999987653

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=96.29  E-value=0.0082  Score=57.27  Aligned_cols=98  Identities=15%  Similarity=0.219  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHH---HHH----H-----------cCCcEE-EeCCC-ccHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ---LLK----E-----------LGVDRV-INYKA-EDIK  287 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~---~l~----~-----------~g~~~v-~~~~~-~~~~  287 (362)
                      .++++|||+||+|.+|..++..+...|++|+++++++.+.+   .+.    +           -++..+ .|..+ +.+.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            56789999999999999999888888999999998866221   111    1           122211 23333 2222


Q ss_pred             HHHHHHCCCceeEEEECCChH---------------HHHHHHHHhc-cCCEEEEEcCccc
Q 018013          288 TVFKEEFPKGFDIIYESVGGD---------------MFNLCLKALA-VYGRLIVIGMISQ  331 (362)
Q Consensus       288 ~~~~~~~~~g~Dvvid~~g~~---------------~~~~~~~~l~-~~G~~v~~G~~~~  331 (362)
                            ...++|+||+|++..               ....+++.+. ...+||.+++...
T Consensus       147 ------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~  200 (427)
T 4f6c_A          147 ------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV  200 (427)
T ss_dssp             ------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred             ------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh
Confidence                  336799999998731               1112333322 4679999987665

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=96.28  E-value=0.0042  Score=57.17  Aligned_cols=100  Identities=14%  Similarity=0.132  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEecCCHhHHHHHHHcCCc-EE--EeCCCcc-HHHHHHHHCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAG-------NTVVATCGGEHKAQLLKELGVD-RV--INYKAED-IKTVFKEEFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G-------~~Vi~~~~~~~~~~~l~~~g~~-~v--~~~~~~~-~~~~~~~~~~~g  297 (362)
                      .+.+|||+||+|.+|..+++.+...|       .+|++++++..+...  ..+.. .+  .|..+.+ +.+.+.    .+
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~----~~   86 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAADLSAPGEAEKLVE----AR   86 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEECCTTSTTHHHHHHH----TC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEEcCCCCHHHHHHHHh----cC
Confidence            46789999999999999998888889       799999886542211  11111 12  2333332 333332    47


Q ss_pred             eeEEEECCChH------H-----------HHHHHHHhcc-------CCEEEEEcCcccccC
Q 018013          298 FDIIYESVGGD------M-----------FNLCLKALAV-------YGRLIVIGMISQYQG  334 (362)
Q Consensus       298 ~Dvvid~~g~~------~-----------~~~~~~~l~~-------~G~~v~~G~~~~~~~  334 (362)
                      +|+||++++..      .           ....++.+.+       .++||.+++...+..
T Consensus        87 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~  147 (342)
T 2hrz_A           87 PDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGA  147 (342)
T ss_dssp             CSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCS
T ss_pred             CCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCC
Confidence            99999998821      0           1122333322       479999998776544

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.28  E-value=0.012  Score=57.17  Aligned_cols=92  Identities=21%  Similarity=0.144  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|.| .|.+|..+++.++.+|++|++++++..+.......|...      .++.+.+     ...|+|+.+++.
T Consensus       275 L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~------~~l~ell-----~~aDiVi~~~~t  342 (494)
T 3d64_A          275 IAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV------VTMEYAA-----DKADIFVTATGN  342 (494)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE------CCHHHHT-----TTCSEEEECSSS
T ss_pred             cCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe------CCHHHHH-----hcCCEEEECCCc
Confidence            6789999999 799999999999999999999999887654444556532      1333332     348999999864


Q ss_pred             -HHH-HHHHHHhccCCEEEEEcCccc
Q 018013          308 -DMF-NLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       308 -~~~-~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       ..+ ...++.|+++..+|.+|..+.
T Consensus       343 ~~lI~~~~l~~MK~gAilINvgrg~v  368 (494)
T 3d64_A          343 YHVINHDHMKAMRHNAIVCNIGHFDS  368 (494)
T ss_dssp             SCSBCHHHHHHCCTTEEEEECSSSSC
T ss_pred             ccccCHHHHhhCCCCcEEEEcCCCcc
Confidence             222 467889999999999988543

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.28  E-value=0.014  Score=49.47  Aligned_cols=143  Identities=17%  Similarity=0.210  Sum_probs=80.8

Q ss_pred             CCCCCeEEEecCCCeeeEEE-eeCCCeeeCCCCC-HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHH
Q 018013          173 VKVGTPAAIMTFGSYAEFTM-VPSKHILPVARPD-PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLA  250 (362)
Q Consensus       173 ~~~Gd~V~~~~~g~~~~~~~-v~~~~~~~ip~~~-~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla  250 (362)
                      ++.|+.+...+  .|.+|.. .+....+.++... ......+ ........+... .+++++||-.| +|. |..+..++
T Consensus         6 ~~~~~~~~~~p--~w~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~~~~l~~~-~~~~~~vLDiG-~G~-G~~~~~l~   79 (205)
T 3grz_A            6 INLSRHLAIVP--EWEDYQPVFKDQEIIRLDPGLAFGTGNHQ-TTQLAMLGIERA-MVKPLTVADVG-TGS-GILAIAAH   79 (205)
T ss_dssp             EEEETTEEEEE--TTCCCCCSSTTCEEEEESCC-----CCHH-HHHHHHHHHHHH-CSSCCEEEEET-CTT-SHHHHHHH
T ss_pred             EEECCcEEEec--cccccccCCCCceeEEecCCcccCCCCCc-cHHHHHHHHHHh-ccCCCEEEEEC-CCC-CHHHHHHH
Confidence            44566555443  4556555 5555555655431 1111100 001111122222 26788999998 343 66666777


Q ss_pred             HHCCC-EEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCCCceeEEEECCChH----HHHHHHHHhcc
Q 018013          251 KLAGN-TVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFPKGFDIIYESVGGD----MFNLCLKALAV  319 (362)
Q Consensus       251 ~~~G~-~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~----~~~~~~~~l~~  319 (362)
                      +. +. +|++++.+++..+.+++    .+..  .++..+..+       ...+.+|+|+.+..-.    .++.+.+.|++
T Consensus        80 ~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~  151 (205)
T 3grz_A           80 KL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNE  151 (205)
T ss_dssp             HT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEE
T ss_pred             HC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCC
Confidence            64 55 99999999988877754    3442  233222211       1235799999876643    35566678999


Q ss_pred             CCEEEEEcCc
Q 018013          320 YGRLIVIGMI  329 (362)
Q Consensus       320 ~G~~v~~G~~  329 (362)
                      +|+++..+..
T Consensus       152 gG~l~~~~~~  161 (205)
T 3grz_A          152 DGQVIFSGID  161 (205)
T ss_dssp             EEEEEEEEEE
T ss_pred             CCEEEEEecC
Confidence            9999986443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=96.28  E-value=0.0055  Score=55.15  Aligned_cols=89  Identities=10%  Similarity=0.072  Sum_probs=57.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-cHHHHHHHHCCCceeEEEECCChH--
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGD--  308 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~--  308 (362)
                      +|||+||+|.+|..+++.+. .|.+|++++++..          ....|..+. .+.+.+..   .++|+||++++..  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------~~~~D~~d~~~~~~~~~~---~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------EFCGDFSNPKGVAETVRK---LRPDVIVNAAAHTAV   67 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------SSCCCTTCHHHHHHHHHH---HCCSEEEECCCCCCH
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------cccccCCCHHHHHHHHHh---cCCCEEEECcccCCH
Confidence            69999999999999998888 7999999998652          011233332 23333322   2589999998721  


Q ss_pred             ----------------HHHHHHHHhcc-CCEEEEEcCcccccC
Q 018013          309 ----------------MFNLCLKALAV-YGRLIVIGMISQYQG  334 (362)
Q Consensus       309 ----------------~~~~~~~~l~~-~G~~v~~G~~~~~~~  334 (362)
                                      .....++.+++ +.+||.+++.+.+..
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~  110 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPG  110 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCC
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeC
Confidence                            12344444444 459999988765543

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.27  E-value=0.036  Score=46.30  Aligned_cols=97  Identities=14%  Similarity=0.118  Sum_probs=62.3

Q ss_pred             HhCC-CCCCEEEEEcCCchHHHHHHHHHHHCC----------CEEEEecCCHhHHHHHHHcCCcEEE-eCC--CccHHHH
Q 018013          224 QAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAG----------NTVVATCGGEHKAQLLKELGVDRVI-NYK--AEDIKTV  289 (362)
Q Consensus       224 ~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G----------~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~--~~~~~~~  289 (362)
                      .... +++++||-.| +|. |..+..+++..|          .+|++++.++...  +  -++ ..+ ..+  .......
T Consensus        16 ~~~~~~~~~~vLDlG-cG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~--~--~~~-~~~~~~d~~~~~~~~~   88 (196)
T 2nyu_A           16 RHQILRPGLRVLDCG-AAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP--L--EGA-TFLCPADVTDPRTSQR   88 (196)
T ss_dssp             HHCCCCTTCEEEEET-CCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC--C--TTC-EEECSCCTTSHHHHHH
T ss_pred             hcCCCCCCCEEEEeC-CCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc--C--CCC-eEEEeccCCCHHHHHH
Confidence            3344 7899999999 565 888899999876          7899999886420  0  112 233 222  1222222


Q ss_pred             HHHHC-CCceeEEEE-----CCCh-------------HHHHHHHHHhccCCEEEEEc
Q 018013          290 FKEEF-PKGFDIIYE-----SVGG-------------DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       290 ~~~~~-~~g~Dvvid-----~~g~-------------~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +.... +..+|+|+.     +++.             ..+..+.+.|+++|+|+..-
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            22222 347999995     3331             34667889999999998763

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=96.25  E-value=0.019  Score=52.13  Aligned_cols=88  Identities=14%  Similarity=0.241  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGD  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~  308 (362)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++.+             .|..+ +.+.+.++.   .++|+||++++..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~-------------~D~~d~~~~~~~~~~---~~~d~vih~a~~~   66 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------LNLLDSRAVHDFFAS---ERIDQVYLAAAKV   66 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------CCTTCHHHHHHHHHH---HCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc-------------CCccCHHHHHHHHHh---cCCCEEEEcCeec
Confidence            468999999999999999998888999998876521             12222 223333322   1689999987621


Q ss_pred             -------------------HHHHHHHHhccC--CEEEEEcCccccc
Q 018013          309 -------------------MFNLCLKALAVY--GRLIVIGMISQYQ  333 (362)
Q Consensus       309 -------------------~~~~~~~~l~~~--G~~v~~G~~~~~~  333 (362)
                                         .....++.+.+.  ++||.+++...+.
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg  112 (321)
T 1e6u_A           67 GGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP  112 (321)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSC
T ss_pred             CCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcC
Confidence                               111333444333  5999999877654

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=96.25  E-value=0.024  Score=57.72  Aligned_cols=101  Identities=20%  Similarity=0.211  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH----HHHHH---HcCCcEE-EeCCCc-cHHHHHHHHCCCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK----AQLLK---ELGVDRV-INYKAE-DIKTVFKEEFPKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~----~~~l~---~~g~~~v-~~~~~~-~~~~~~~~~~~~g~D  299 (362)
                      .+++|||+||+|.+|..+++.+...|.+|++++++..+    .+.++   ..++..+ .|..+. .+.+.++.   .++|
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~---~~~D   86 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE---YKID   86 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH---SCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHh---CCCC
Confidence            46899999999999999999888899999999875432    22222   2233322 343332 23333332   2699


Q ss_pred             EEEECCChHH------------------HHHHHHHhcc--CCEEEEEcCcccc
Q 018013          300 IIYESVGGDM------------------FNLCLKALAV--YGRLIVIGMISQY  332 (362)
Q Consensus       300 vvid~~g~~~------------------~~~~~~~l~~--~G~~v~~G~~~~~  332 (362)
                      +||++++...                  ...+++.++.  .++||.+++...+
T Consensus        87 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vy  139 (699)
T 1z45_A           87 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVY  139 (699)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGG
T ss_pred             EEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHh
Confidence            9999987310                  1123344433  3699999887654

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.25  E-value=0.019  Score=53.46  Aligned_cols=92  Identities=21%  Similarity=0.160  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|+| .|.+|..+++.++.+|++|++.+++..+.+.+++.|+..+     .++.+.+     ...|+|+.++..
T Consensus       162 l~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell-----~~aDvV~l~~Pl  230 (351)
T 3jtm_A          162 LEGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----EDLNEML-----PKCDVIVINMPL  230 (351)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SCHHHHG-----GGCSEEEECSCC
T ss_pred             ccCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CCHHHHH-----hcCCEEEECCCC
Confidence            3588999999 8999999999999999999999988666666777776432     2344443     247999998773


Q ss_pred             --H---H-HHHHHHHhccCCEEEEEcCcc
Q 018013          308 --D---M-FNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 --~---~-~~~~~~~l~~~G~~v~~G~~~  330 (362)
                        +   . -...+..|+++..||.++.-+
T Consensus       231 t~~t~~li~~~~l~~mk~gailIN~aRG~  259 (351)
T 3jtm_A          231 TEKTRGMFNKELIGKLKKGVLIVNNARGA  259 (351)
T ss_dssp             CTTTTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             CHHHHHhhcHHHHhcCCCCCEEEECcCch
Confidence              1   2 256788899999999887644

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=96.24  E-value=0.0061  Score=54.55  Aligned_cols=86  Identities=17%  Similarity=0.138  Sum_probs=57.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCChHH-
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDM-  309 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~-  309 (362)
                      +|||+||+|.+|..+++.+...|.+|+++++..              .|..+ +.+.+.+...   ++|+||++++... 
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------------~D~~d~~~~~~~~~~~---~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL--------------LDITNISQVQQVVQEI---RPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT--------------SCTTCHHHHHHHHHHH---CCSEEEECCCCCCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc--------------cCCCCHHHHHHHHHhc---CCCEEEECCcccCh
Confidence            799999999999999999988899999999832              12222 2233333322   6899999887210 


Q ss_pred             -----------------HHHHHHHh-ccCCEEEEEcCcccccC
Q 018013          310 -----------------FNLCLKAL-AVYGRLIVIGMISQYQG  334 (362)
Q Consensus       310 -----------------~~~~~~~l-~~~G~~v~~G~~~~~~~  334 (362)
                                       ....++.+ +.+.+||.+++...+..
T Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~  112 (287)
T 3sc6_A           70 DQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQG  112 (287)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCC
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCC
Confidence                             12233333 33569999988765543

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.23  E-value=0.0038  Score=54.34  Aligned_cols=73  Identities=14%  Similarity=0.163  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHH
Q 018013          229 SGKKVLVTAA----------------AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFK  291 (362)
Q Consensus       229 ~g~~VlI~ga----------------~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~  291 (362)
                      .|++|||+||                +|++|.++++.+...|++|+.+.+... .+.  ..|. .+++..+ .++.+.+.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~--~~g~-~~~dv~~~~~~~~~v~   82 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT--PPFV-KRVDVMTALEMEAAVN   82 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC--CTTE-EEEECCSHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc--CCCC-eEEccCcHHHHHHHHH
Confidence            5899999998                589999999999999999999876431 110  1122 3445444 22333333


Q ss_pred             HHCCCceeEEEECCC
Q 018013          292 EEFPKGFDIIYESVG  306 (362)
Q Consensus       292 ~~~~~g~Dvvid~~g  306 (362)
                      +.. +++|++++|+|
T Consensus        83 ~~~-~~~Dili~~Aa   96 (226)
T 1u7z_A           83 ASV-QQQNIFIGCAA   96 (226)
T ss_dssp             HHG-GGCSEEEECCB
T ss_pred             Hhc-CCCCEEEECCc
Confidence            333 35899999988

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=96.22  E-value=0.0064  Score=56.34  Aligned_cols=72  Identities=19%  Similarity=0.202  Sum_probs=45.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCH--hHHHHHHHc--CCc-EEE--eCCCc-cHHHHHHHHCCCceeEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGE--HKAQLLKEL--GVD-RVI--NYKAE-DIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~--~~~~~l~~~--g~~-~v~--~~~~~-~~~~~~~~~~~~g~Dvvi  302 (362)
                      +|||+||+|.+|..+++.+... |.+|++++++.  .+.+.+.++  +.. .++  |..+. .+.+.+..   .++|+||
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vi   78 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ---YQPDAVM   78 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhh---cCCCEEE
Confidence            6999999999999988777666 78999998753  122222222  111 222  33332 23333322   3699999


Q ss_pred             ECCC
Q 018013          303 ESVG  306 (362)
Q Consensus       303 d~~g  306 (362)
                      ++++
T Consensus        79 h~A~   82 (361)
T 1kew_A           79 HLAA   82 (361)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9987

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.22  E-value=0.016  Score=56.12  Aligned_cols=92  Identities=21%  Similarity=0.142  Sum_probs=70.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|+|.| .|.+|..+++.++.+|++|++++++..+.......|+. +     .++.+.+     ...|+|+.+.+.
T Consensus       255 l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~-----~~l~ell-----~~aDiVi~~~~t  322 (479)
T 1v8b_A          255 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-V-----VTLDEIV-----DKGDFFITCTGN  322 (479)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHT-----TTCSEEEECCSS
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-e-----cCHHHHH-----hcCCEEEECCCh
Confidence            6799999999 79999999999999999999999988765445556653 2     1333332     358999999764


Q ss_pred             -HHH-HHHHHHhccCCEEEEEcCccc
Q 018013          308 -DMF-NLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       308 -~~~-~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       ..+ ...++.|+++..++.+|..+.
T Consensus       323 ~~lI~~~~l~~MK~gailiNvgrg~~  348 (479)
T 1v8b_A          323 VDVIKLEHLLKMKNNAVVGNIGHFDD  348 (479)
T ss_dssp             SSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             hhhcCHHHHhhcCCCcEEEEeCCCCc
Confidence             222 367788999999999987543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.21  E-value=0.05  Score=48.86  Aligned_cols=87  Identities=15%  Similarity=0.108  Sum_probs=62.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC-hHH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDM  309 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g-~~~  309 (362)
                      .+|.|+| .|.+|...++.+...|.+|++.++++++.+.+.+.|+...     .+..+.+.     ..|+||.|+. ...
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~-----~aDvvi~~vp~~~~   70 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-----ATPCEVVE-----SCPVTFAMLADPAA   70 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHH-----HCSEEEECCSSHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHh-----cCCEEEEEcCCHHH
Confidence            5789999 7999999999999999999999999999988887775321     23333332     3688888888 334


Q ss_pred             HHHHH-------HHhccCCEEEEEcC
Q 018013          310 FNLCL-------KALAVYGRLIVIGM  328 (362)
Q Consensus       310 ~~~~~-------~~l~~~G~~v~~G~  328 (362)
                      +...+       ..++++..+|.++.
T Consensus        71 ~~~v~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           71 AEEVCFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHcCcchHhhcCCCCCEEEeCCC
Confidence            44333       55666666666643

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.20  E-value=0.021  Score=47.28  Aligned_cols=98  Identities=18%  Similarity=0.211  Sum_probs=67.5

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCC-c--EEEeCCCccHHHHHHHHCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGV-D--RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~-~--~v~~~~~~~~~~~~~~~~~  295 (362)
                      ......++++||-.| +|. |..+..+++.. .+|++++.+++..+.+++    .+. +  .++.   .++.+.+.  ..
T Consensus        27 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~--~~   98 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVG-CGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEALC--KI   98 (192)
T ss_dssp             HHHCCCTTCEEEEES-CTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHHT--TS
T ss_pred             HhcCCCCCCEEEEEC-CCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cCHHHhcc--cC
Confidence            334458889999998 444 77777777765 899999999988877754    444 1  2222   23333221  11


Q ss_pred             CceeEEEECCC----hHHHHHHHHHhccCCEEEEEcC
Q 018013          296 KGFDIIYESVG----GDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       296 ~g~Dvvid~~g----~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ..+|+|+.+..    ...++.+.+.|+++|+++....
T Consensus        99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~  135 (192)
T 1l3i_A           99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (192)
T ss_dssp             CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence            46999997755    3678888999999999987644

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.17  E-value=0.023  Score=51.14  Aligned_cols=96  Identities=14%  Similarity=0.098  Sum_probs=62.2

Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcCC---cEEEeCCCccHHHHHHHHCC
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELGV---DRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g~---~~v~~~~~~~~~~~~~~~~~  295 (362)
                      |..... -.+++++|+| +|++|.+++..+...|+ +|+++.++.++.+.+. +++.   ..+.+..+         . .
T Consensus       117 L~~~~~~l~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---------l-~  185 (281)
T 3o8q_A          117 LLAQQVLLKGATILLIG-AGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---------L-K  185 (281)
T ss_dssp             HHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---------C-C
T ss_pred             HHHhCCCccCCEEEEEC-chHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---------h-c
Confidence            444444 5789999999 59999999998888997 9999999998876664 3432   12332221         1 1


Q ss_pred             CceeEEEECCChHHHHH----HHHHhccCCEEEEEcC
Q 018013          296 KGFDIIYESVGGDMFNL----CLKALAVYGRLIVIGM  328 (362)
Q Consensus       296 ~g~Dvvid~~g~~~~~~----~~~~l~~~G~~v~~G~  328 (362)
                      .++|+||++++..+...    -...++++..++++-.
T Consensus       186 ~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY  222 (281)
T 3o8q_A          186 QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMY  222 (281)
T ss_dssp             SCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCC
T ss_pred             CCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecC
Confidence            56999999987422111    1234555555555543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=96.16  E-value=0.023  Score=52.20  Aligned_cols=100  Identities=18%  Similarity=0.041  Sum_probs=58.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHh--HHHHHHHcC-Cc-EEEeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEH--KAQLLKELG-VD-RVINYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~--~~~~l~~~g-~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      ++|||+||+|.+|..+++.+...  |.+|++++++..  ..+.+.++. .. .++..+-.+........  .++|+||++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vih~   82 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLA--AKADAIVHY   82 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH--TTCSEEEEC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHh--hcCCEEEEC
Confidence            58999999999999998877776  889999987532  112222221 11 22222212222211112  347999999


Q ss_pred             CChH-----------H-------HHHHHHHh-ccCCEEEEEcCcccc
Q 018013          305 VGGD-----------M-------FNLCLKAL-AVYGRLIVIGMISQY  332 (362)
Q Consensus       305 ~g~~-----------~-------~~~~~~~l-~~~G~~v~~G~~~~~  332 (362)
                      ++..           .       ....++.+ +.+++||.+++...+
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vy  129 (348)
T 1oc2_A           83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVY  129 (348)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGG
T ss_pred             CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEeccccee
Confidence            8731           0       11223333 335699999876543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=96.14  E-value=0.004  Score=56.58  Aligned_cols=97  Identities=20%  Similarity=0.248  Sum_probs=57.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      ++|||+||+|.+|..+++.+...|..|++..++..+.+.+ ..++..+ .|..++++.+.+     .++|+||++++.. 
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~-----~~~d~vih~a~~~~   75 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-NEAARLVKADLAADDIKDYL-----KGAEEVWHIAANPD   75 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-CTTEEEECCCTTTSCCHHHH-----TTCSEEEECCCCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-CCCcEEEECcCChHHHHHHh-----cCCCEEEECCCCCC
Confidence            3799999999999999999988895444444433322221 1112211 233333444433     2699999998721 


Q ss_pred             -----------------HHHHHHHHhcc--CCEEEEEcCccccc
Q 018013          309 -----------------MFNLCLKALAV--YGRLIVIGMISQYQ  333 (362)
Q Consensus       309 -----------------~~~~~~~~l~~--~G~~v~~G~~~~~~  333 (362)
                                       ....+++.++.  .++||.+++...+.
T Consensus        76 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg  119 (313)
T 3ehe_A           76 VRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYG  119 (313)
T ss_dssp             CC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGC
T ss_pred             hhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhC
Confidence                             11123333432  36999999977664

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.12  E-value=0.024  Score=49.94  Aligned_cols=101  Identities=16%  Similarity=0.125  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHH-----CCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEE-----FPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~-----~~~  296 (362)
                      .++++||-.|  .|.|..++.+++.+  +.+|++++.+++..+.+++    .|...-+.....+..+.+...     ..+
T Consensus        78 ~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~  155 (247)
T 1sui_A           78 INAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG  155 (247)
T ss_dssp             TTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred             hCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence            5678999998  46688888888876  5799999999888777753    455211111112232322222     135


Q ss_pred             ceeEEEECCC----hHHHHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVG----GDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g----~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .+|+||-...    ...++.+.++|++||.++.-....
T Consensus       156 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~  193 (247)
T 1sui_A          156 SYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLW  193 (247)
T ss_dssp             CBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred             CEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence            6999986543    257888999999999998755443

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=96.12  E-value=0.013  Score=59.37  Aligned_cols=100  Identities=14%  Similarity=0.044  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH-cCCcEE-EeCCCc-c-HHHHHHHHCCCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE-LGVDRV-INYKAE-D-IKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~-~g~~~v-~~~~~~-~-~~~~~~~~~~~g~Dvvid  303 (362)
                      .+++|||+||+|.+|..+++.+... |.+|++++++..+.+.+.. .++..+ .|..+. + +.+.+     .++|+||+
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~-----~~~D~Vih  388 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV-----KKCDVVLP  388 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHH-----HHCSEEEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhh-----cCCCEEEE
Confidence            5678999999999999999888777 8899999987665432211 122222 233332 2 22222     26899999


Q ss_pred             CCChH------------------HHHHHHHHh-ccCCEEEEEcCccccc
Q 018013          304 SVGGD------------------MFNLCLKAL-AVYGRLIVIGMISQYQ  333 (362)
Q Consensus       304 ~~g~~------------------~~~~~~~~l-~~~G~~v~~G~~~~~~  333 (362)
                      +++..                  .....++.+ +.+++||.+++.+.+.
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg  437 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYG  437 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGB
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcC
Confidence            87620                  011233333 2348999999876653

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.12  E-value=0.018  Score=50.31  Aligned_cols=100  Identities=15%  Similarity=0.095  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHH-----CCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEE-----FPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~-----~~~  296 (362)
                      .++++||-.|  .|.|..++.+++.+  +.+|+.++.+++..+.+++    .|...-+.....+..+.+...     ..+
T Consensus        69 ~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~  146 (237)
T 3c3y_A           69 VNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG  146 (237)
T ss_dssp             TTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred             hCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence            5678999998  35677788888876  5799999999888777753    455311111112233332222     135


Q ss_pred             ceeEEEECCCh----HHHHHHHHHhccCCEEEEEcCc
Q 018013          297 GFDIIYESVGG----DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       297 g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      .+|+||-....    ..++.+.++|++||.++.-...
T Consensus       147 ~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~  183 (237)
T 3c3y_A          147 SYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTL  183 (237)
T ss_dssp             CEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred             CcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence            69999866542    5678899999999999876543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=96.12  E-value=0.0056  Score=54.90  Aligned_cols=96  Identities=16%  Similarity=0.189  Sum_probs=64.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCCcc-HHHHHHHHCCCceeEEEECCCh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKAED-IKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~-~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      +.+|||+| +|.+|..+++.+...|.+|++++++.++.    ..++..+ .|..+.+ +.+.    ..+.+|+||++++.
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~----~~~~~d~vih~a~~   73 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASI----VHLRPEILVYCVAA   73 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTG----GGGCCSEEEECHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHh----hcCCCCEEEEeCCC
Confidence            46899999 69999999999999999999999986652    1233332 2433322 2111    11249999999873


Q ss_pred             H-------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          308 D-------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       308 ~-------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      .             .....++.++..  ++||.+++.+.|..
T Consensus        74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~  115 (286)
T 3gpi_A           74 SEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQ  115 (286)
T ss_dssp             HHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcC
Confidence            1             234555666544  59999988776543

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.12  E-value=0.017  Score=50.92  Aligned_cols=102  Identities=16%  Similarity=0.202  Sum_probs=68.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHC-CCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEF-PKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~-~~g~Dv  300 (362)
                      .++++||-.|.  |.|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+..+.+.... .+.+|+
T Consensus        62 ~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~  139 (248)
T 3tfw_A           62 TQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL  139 (248)
T ss_dssp             HTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred             cCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence            57889999983  4588888888876  5699999999988877754    3543111111233333333222 247999


Q ss_pred             EEECCCh----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          301 IYESVGG----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       301 vid~~g~----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ||-....    ..++.+.+.|++||.++.-.....
T Consensus       140 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~  174 (248)
T 3tfw_A          140 IFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRD  174 (248)
T ss_dssp             EEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred             EEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence            9854442    468889999999999988666543

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.12  E-value=0.028  Score=48.37  Aligned_cols=97  Identities=19%  Similarity=0.169  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC------CEEEEecCCHhHHHHHHH----cC-----Cc--EEEeCCCc-cHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG------NTVVATCGGEHKAQLLKE----LG-----VD--RVINYKAE-DIKTV  289 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G------~~Vi~~~~~~~~~~~l~~----~g-----~~--~v~~~~~~-~~~~~  289 (362)
                      +++++||-.| +|. |..+..+++..+      .+|++++.+++..+.+++    .+     .+  .++..+.. .+...
T Consensus        79 ~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~  156 (227)
T 2pbf_A           79 KPGSRAIDVG-SGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE  156 (227)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence            7899999998 443 888888898876      599999999988777754    34     21  22222211 11110


Q ss_pred             HHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcC
Q 018013          290 FKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       290 ~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ..  ....+|+|+.+..- ..++.+.+.|+++|+++..-.
T Consensus       157 ~~--~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          157 KK--ELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HH--HHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             Cc--cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            01  12469999887663 566888999999999887644

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.11  E-value=0.0079  Score=56.35  Aligned_cols=91  Identities=15%  Similarity=0.102  Sum_probs=68.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~-Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      -.|++|.|+| .|.+|..+++.++.+|++ |++.+++..+.+.+.++|+..+     .++.+.+.     ..|+|+.++.
T Consensus       162 l~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~-----~aDvV~l~~P  230 (364)
T 2j6i_A          162 IEGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----ENIEELVA-----QADIVTVNAP  230 (364)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SSHHHHHH-----TCSEEEECCC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CCHHHHHh-----cCCEEEECCC
Confidence            4689999999 899999999999999997 9999987766666667775321     23444432     4799999887


Q ss_pred             h-----HHH-HHHHHHhccCCEEEEEcCc
Q 018013          307 G-----DMF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       307 ~-----~~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                      .     ..+ ...+..|+++..||.++.-
T Consensus       231 ~t~~t~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence            4     122 3567889999999888764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.11  E-value=0.013  Score=53.75  Aligned_cols=97  Identities=22%  Similarity=0.212  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH---HHHHHHcC-----CcEE-EeCCC-ccHHHHHHHHCCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK---AQLLKELG-----VDRV-INYKA-EDIKTVFKEEFPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~---~~~l~~~g-----~~~v-~~~~~-~~~~~~~~~~~~~g~  298 (362)
                      .+++|||+||+|.+|..++..+...|.+|++++++.++   ...+.++.     +..+ .|..+ +.+.+.+     .++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~   78 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI-----KGC   78 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH-----TTC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH-----cCC
Confidence            46899999999999999999888899999998887653   22222221     1111 23333 3333333     358


Q ss_pred             eEEEECCCh------H----HH-------HHHHHHhcc---CCEEEEEcCcc
Q 018013          299 DIIYESVGG------D----MF-------NLCLKALAV---YGRLIVIGMIS  330 (362)
Q Consensus       299 Dvvid~~g~------~----~~-------~~~~~~l~~---~G~~v~~G~~~  330 (362)
                      |+||++++.      +    .+       ..+++.+.+   .++||.+++..
T Consensus        79 d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~  130 (337)
T 2c29_D           79 TGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAG  130 (337)
T ss_dssp             SEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGG
T ss_pred             CEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHh
Confidence            999998752      0    11       123333322   47999998876

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.11  E-value=0.017  Score=51.83  Aligned_cols=90  Identities=22%  Similarity=0.191  Sum_probs=63.7

Q ss_pred             HHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ..+...|+.... -.|++++|.|.++-+|..+++++...|++|+++.+.                   ..++.+.+    
T Consensus       146 ~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-------------------t~~L~~~~----  202 (285)
T 3l07_A          146 KGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF-------------------TTDLKSHT----  202 (285)
T ss_dssp             HHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------------CSSHHHHH----
T ss_pred             HHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC-------------------chhHHHhc----
Confidence            344556666665 689999999966668999999999999999887542                   12333332    


Q ss_pred             CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +..|+||.++|...+ .--+.++++-.+|.+|...
T Consensus       203 -~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          203 -TKADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             -TTCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             -ccCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence             347999999885321 1124578888889888764

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.10  E-value=0.046  Score=46.32  Aligned_cols=97  Identities=20%  Similarity=0.199  Sum_probs=68.0

Q ss_pred             HHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EEEeCCCccHHHHHHHHCCCcee
Q 018013          223 EQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       223 ~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      ..... .++.+||-.|+  |.|..+..+++. |++|++++.+++..+.+++.+..  .++..+..++      ...+.+|
T Consensus        39 ~~l~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~------~~~~~~D  109 (218)
T 3ou2_A           39 ERLRAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW------TPDRQWD  109 (218)
T ss_dssp             HHHTTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC------CCSSCEE
T ss_pred             HHHhcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC------CCCCcee
Confidence            33443 77889999983  347777777777 88999999999988888876632  2222222221      2346799


Q ss_pred             EEEECCC---------hHHHHHHHHHhccCCEEEEEcC
Q 018013          300 IIYESVG---------GDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       300 vvid~~g---------~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      +|+.+..         ...++.+.+.|+++|+++....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            9997643         2357788899999999988754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=96.08  E-value=0.007  Score=54.66  Aligned_cols=97  Identities=13%  Similarity=0.077  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhH--HHHHHHcCCcEEEeCCCccHHHHHHHHCCC----ceeEEEEC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHK--AQLLKELGVDRVINYKAEDIKTVFKEEFPK----GFDIIYES  304 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~--~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~----g~Dvvid~  304 (362)
                      +|||+||+|.+|..+++.+...| .+|++++++..+  ...+...  ....|..+.   +.+.....+    ++|+||++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~d~~~~---~~~~~~~~~~~~~~~d~vi~~   75 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKE---DFLIQIMAGEEFGDVEAIFHE   75 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS--CCSEEEEHH---HHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcc--eeccccccH---HHHHHHHhccccCCCcEEEEC
Confidence            48999999999999999988889 899999886543  2222222  111122221   222222222    69999999


Q ss_pred             CChH----------------HHHHHHHHhcc-CCEEEEEcCccccc
Q 018013          305 VGGD----------------MFNLCLKALAV-YGRLIVIGMISQYQ  333 (362)
Q Consensus       305 ~g~~----------------~~~~~~~~l~~-~G~~v~~G~~~~~~  333 (362)
                      ++..                .....++.+.+ +.+||.+++...+.
T Consensus        76 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g  121 (310)
T 1eq2_A           76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG  121 (310)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGT
T ss_pred             cccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhC
Confidence            8721                01233443333 23999998876543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=96.07  E-value=0.0076  Score=54.72  Aligned_cols=95  Identities=17%  Similarity=0.203  Sum_probs=59.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHHcCCcEE-EeCCCc-cHHHHHHHHCCCceeEEEECCCh
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKELGVDRV-INYKAE-DIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      +|||+||+|.+|..+++.+...  |.+|++++++..+.+     +...+ .|..+. .+.+.+..   .++|+||++++.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~---~~~d~vih~a~~   72 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEK---YSIDAIFHLAGI   72 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHH---TTCCEEEECCCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhh---cCCcEEEECCcc
Confidence            4899999999999998877766  789999987654321     33322 233332 23333322   369999999872


Q ss_pred             H-----------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          308 D-----------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       308 ~-----------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      .                 .....++.+++.  ++||.+++...+..
T Consensus        73 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~  118 (317)
T 3ajr_A           73 LSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGP  118 (317)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCT
T ss_pred             cCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCC
Confidence            1                 012334444433  59999988766543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.07  E-value=0.04  Score=53.09  Aligned_cols=94  Identities=15%  Similarity=0.141  Sum_probs=58.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~  308 (362)
                      +++|+|+| +|++|.++++.+...|++|++++++.++.+.+.+ ++....+..+-.+..+.....  .++|+|++|++..
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l--~~~DvVIn~a~~~   79 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV--AKHDLVISLIPYT   79 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHH--TTSSEEEECCC--
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHH--cCCcEEEECCccc
Confidence            57899998 8999999998888899999999999887766542 332122222222222211112  2699999999852


Q ss_pred             -HHHHHHHHhccCCEEEEE
Q 018013          309 -MFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       309 -~~~~~~~~l~~~G~~v~~  326 (362)
                       .......++.++-.++..
T Consensus        80 ~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           80 FHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             CHHHHHHHHHHHTCEEEES
T ss_pred             cchHHHHHHHhCCCeEEEe
Confidence             222334455555555544

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.06  E-value=0.02  Score=52.68  Aligned_cols=89  Identities=9%  Similarity=0.003  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      -.|++|.|+| .|.+|..+++.++..|++|++.++ +.++ +.+.++|+.. .    .++.+.+.     ..|+|+.++.
T Consensus       144 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~-~----~~l~ell~-----~aDvVil~~p  211 (320)
T 1gdh_A          144 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATF-H----DSLDSLLS-----VSQFFSLNAP  211 (320)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEE-C----SSHHHHHH-----HCSEEEECCC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEE-c----CCHHHHHh-----hCCEEEEecc
Confidence            3678999999 899999999999999999999998 7665 3555677632 1    23444432     4799999877


Q ss_pred             hH-----HH-HHHHHHhccCCEEEEEcC
Q 018013          307 GD-----MF-NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       307 ~~-----~~-~~~~~~l~~~G~~v~~G~  328 (362)
                      ..     .+ ...++.|+++..+|.++.
T Consensus       212 ~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          212 STPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            31     22 346678899888888877

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.05  E-value=0.022  Score=51.12  Aligned_cols=89  Identities=18%  Similarity=0.145  Sum_probs=65.2

Q ss_pred             HHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ......|+.... -.|++++|.|.++-+|..+++++...|++|+++.+..                   .++.+.++   
T Consensus       146 ~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------------~~L~~~~~---  203 (286)
T 4a5o_A          146 KGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------------RDLADHVS---  203 (286)
T ss_dssp             HHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------------SCHHHHHH---
T ss_pred             HHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------------cCHHHHhc---
Confidence            344556666666 6899999999767799999999999999998876421                   23333332   


Q ss_pred             CCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                        ..|+||.++|.. .+.  -+.++++-.+|.+|...
T Consensus       204 --~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          204 --RADLVVVAAGKPGLVK--GEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             --TCSEEEECCCCTTCBC--GGGSCTTCEEEECCSCS
T ss_pred             --cCCEEEECCCCCCCCC--HHHcCCCeEEEEecccc
Confidence              379999999853 222  24578999999999865

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.04  E-value=0.073  Score=47.93  Aligned_cols=86  Identities=16%  Similarity=0.084  Sum_probs=63.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC-hHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMF  310 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g-~~~~  310 (362)
                      +|.|+| +|.+|...+..+...|.+|+++++++++.+.+.+.|+..     ..+..+.+.     ++|+||.|+. ...+
T Consensus         7 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~-----~~D~vi~~v~~~~~~   75 (299)
T 1vpd_A            7 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-----ASTAKAIAE-----QCDVIITMLPNSPHV   75 (299)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-----CSSHHHHHH-----HCSEEEECCSSHHHH
T ss_pred             eEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee-----cCCHHHHHh-----CCCEEEEECCCHHHH
Confidence            799999 799999999888888999999999999888887776532     123333332     4799999998 4444


Q ss_pred             HHHH-------HHhccCCEEEEEcC
Q 018013          311 NLCL-------KALAVYGRLIVIGM  328 (362)
Q Consensus       311 ~~~~-------~~l~~~G~~v~~G~  328 (362)
                      +..+       ..++++..++.++.
T Consensus        76 ~~~~~~~~~l~~~l~~~~~vv~~s~  100 (299)
T 1vpd_A           76 KEVALGENGIIEGAKPGTVLIDMSS  100 (299)
T ss_dssp             HHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHhCcchHhhcCCCCCEEEECCC
Confidence            4444       56777777777644

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.02  E-value=0.024  Score=51.52  Aligned_cols=101  Identities=18%  Similarity=0.190  Sum_probs=69.8

Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHH
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEE  293 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~  293 (362)
                      +..+.. +++++||-.| + |.|..+..+++..|++|++++.+++..+.+++    .|..   .++..+..++.     .
T Consensus       109 ~~~l~~~~~~~~vLDiG-c-G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~  181 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAG-C-GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-----F  181 (312)
T ss_dssp             HTTSCCCCTTCEEEEES-C-TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----C
T ss_pred             HHHhccCCCCCEEEEec-C-CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-----C
Confidence            344443 7899999998 3 45788888888778999999999988877754    4432   22222211110     1


Q ss_pred             CCCceeEEEECCC------hHHHHHHHHHhccCCEEEEEcCc
Q 018013          294 FPKGFDIIYESVG------GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       294 ~~~g~Dvvid~~g------~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ..+.+|+|+.+..      ...++.+.+.|+++|+++.+...
T Consensus       182 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~  223 (312)
T 3vc1_A          182 DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGC  223 (312)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            2357999987543      36788999999999999987643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.99  E-value=0.04  Score=49.30  Aligned_cols=91  Identities=24%  Similarity=0.264  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcCC--cEEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELGV--DRVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g~--~~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      -.+++++|+| +|++|.+++..+...|+ +|+++.++.++.+.+. +++.  ..+....+  +       ....+|+||+
T Consensus       118 l~~k~~lvlG-aGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~--l-------~~~~~DivIn  187 (272)
T 3pwz_A          118 LRNRRVLLLG-AGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA--L-------EGQSFDIVVN  187 (272)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG--G-------TTCCCSEEEE
T ss_pred             ccCCEEEEEC-ccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH--h-------cccCCCEEEE
Confidence            4689999999 59999999998888996 9999999999877664 4443  12232221  1       1156999999


Q ss_pred             CCChHHHH----HHHHHhccCCEEEEEcC
Q 018013          304 SVGGDMFN----LCLKALAVYGRLIVIGM  328 (362)
Q Consensus       304 ~~g~~~~~----~~~~~l~~~G~~v~~G~  328 (362)
                      ++...+..    .-...++++..++++-.
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence            98742211    11245667776666644

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.99  E-value=0.029  Score=50.90  Aligned_cols=93  Identities=20%  Similarity=0.133  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcCCc--EEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELGVD--RVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      -.+++++|+| +|++|.+++..+...|+ +|+++.++.++.+.+. +++..  .+++     +.+ +.+. -.++|+||+
T Consensus       139 l~~~~vlVlG-aGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-----~~~-~~~~-~~~aDivIn  210 (297)
T 2egg_A          139 LDGKRILVIG-AGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-----LAE-AETR-LAEYDIIIN  210 (297)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-----HHH-HHHT-GGGCSEEEE
T ss_pred             CCCCEEEEEC-cHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-----HHH-HHhh-hccCCEEEE
Confidence            4688999999 59999999999999998 9999999998876664 55542  2221     211 1111 146899999


Q ss_pred             CCChHHH------HHHHHHhccCCEEEEEcC
Q 018013          304 SVGGDMF------NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       304 ~~g~~~~------~~~~~~l~~~G~~v~~G~  328 (362)
                      |++....      ......++++..++++..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            9985321      011245667777777765

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.98  E-value=0.062  Score=48.72  Aligned_cols=89  Identities=15%  Similarity=-0.008  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-H
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-D  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~  308 (362)
                      ..+|.|+| .|.+|...+..+...|.+|++.++++++.+.+.+.|.....+...+.         -...|+||.|+.. .
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~---------~~~aDvvi~~vp~~~   76 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREF---------AGVVDALVILVVNAA   76 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTT---------TTTCSEEEECCSSHH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHH---------HhcCCEEEEECCCHH
Confidence            35799998 89999999999889999999999999999999888875422211111         1246777777775 2


Q ss_pred             HHHHHH-------HHhccCCEEEEEcC
Q 018013          309 MFNLCL-------KALAVYGRLIVIGM  328 (362)
Q Consensus       309 ~~~~~~-------~~l~~~G~~v~~G~  328 (362)
                      ..+..+       ..++++..+|.++.
T Consensus        77 ~~~~v~~~~~~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           77 QVRQVLFGEDGVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             HHHHHHC--CCCGGGSCTTCEEEECSC
T ss_pred             HHHHHHhChhhHHhhCCCCCEEEecCC
Confidence            344433       34455555555543

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.94  E-value=0.045  Score=50.55  Aligned_cols=89  Identities=18%  Similarity=0.173  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|+| .|.+|..+++.++..|.+|++.+++.++ +.+.++|+..      .++.+.+.     ..|+|+.++..
T Consensus       148 l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~------~~l~~~l~-----~aDvVil~vp~  214 (334)
T 2dbq_A          148 VYGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF------KPLEDLLR-----ESDFVVLAVPL  214 (334)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE------CCHHHHHH-----HCSEEEECCCC
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc------CCHHHHHh-----hCCEEEECCCC
Confidence            4578999999 7999999999999999999999998776 5566667531      13444332     37999998873


Q ss_pred             H-----HH-HHHHHHhccCCEEEEEcCc
Q 018013          308 D-----MF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 ~-----~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                      .     .+ ...+..|+++..||.++.-
T Consensus       215 ~~~t~~~i~~~~~~~mk~~ailIn~srg  242 (334)
T 2dbq_A          215 TRETYHLINEERLKLMKKTAILINIARG  242 (334)
T ss_dssp             CTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             ChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence            2     22 3567788998888887743

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.94  E-value=0.019  Score=49.33  Aligned_cols=101  Identities=23%  Similarity=0.245  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCC----Cc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFP----KG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~----~g  297 (362)
                      .++++||=.|  .|.|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+..+.+.....    +.
T Consensus        63 ~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~  140 (225)
T 3tr6_A           63 MQAKKVIDIG--TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQ  140 (225)
T ss_dssp             HTCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred             hCCCEEEEeC--CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCC
Confidence            5678999998  34578888888876  5799999999988877754    35431011111233333322221    57


Q ss_pred             eeEEEECCCh----HHHHHHHHHhccCCEEEEEcCcc
Q 018013          298 FDIIYESVGG----DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       298 ~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +|+||-....    ..++.+.+.|+++|.++.-....
T Consensus       141 fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~  177 (225)
T 3tr6_A          141 YDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLR  177 (225)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred             ccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence            9999965542    46788899999999999865543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.91  E-value=0.014  Score=52.92  Aligned_cols=96  Identities=19%  Similarity=0.196  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhH---HHHHHHcCC---c-EEE--eCCC-ccHHHHHHHHCCCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHK---AQLLKELGV---D-RVI--NYKA-EDIKTVFKEEFPKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~---~~~l~~~g~---~-~v~--~~~~-~~~~~~~~~~~~~g~  298 (362)
                      |++|||+||+|.+|..+++.+...|.+|+++++ +.++   ...+.++..   . .++  |..+ +.+.+.+     .++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~   75 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI-----EGC   75 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH-----TTC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH-----cCC
Confidence            578999999999999999988889999999887 5422   222222211   1 122  3333 2333332     258


Q ss_pred             eEEEECCCh------H----HH-------HHHHHHhcc---CCEEEEEcCcc
Q 018013          299 DIIYESVGG------D----MF-------NLCLKALAV---YGRLIVIGMIS  330 (362)
Q Consensus       299 Dvvid~~g~------~----~~-------~~~~~~l~~---~G~~v~~G~~~  330 (362)
                      |+||++++.      +    .+       ..+++.+.+   .++||.+++..
T Consensus        76 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~  127 (322)
T 2p4h_X           76 VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGS  127 (322)
T ss_dssp             SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGG
T ss_pred             CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence            999998752      0    11       123333333   36999998876

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=95.90  E-value=0.0087  Score=53.06  Aligned_cols=97  Identities=20%  Similarity=0.086  Sum_probs=60.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh---
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG---  307 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~---  307 (362)
                      ++|||+||+|.+|..+++.+...|++|++++++..+..   ..+. .++..+-.+........  .++|+||++++.   
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~-~~~~~Dl~d~~~~~~~~--~~~d~vi~~a~~~~~   76 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHE-EIVACDLADAQAVHDLV--KDCDGIIHLGGVSVE   76 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTE-EECCCCTTCHHHHHHHH--TTCSEEEECCSCCSC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCc-cEEEccCCCHHHHHHHH--cCCCEEEECCcCCCC
Confidence            57999999999999999888888999999998765311   1122 22222212222221112  259999999873   


Q ss_pred             H-----------HHHHHHHHhcc--CCEEEEEcCccccc
Q 018013          308 D-----------MFNLCLKALAV--YGRLIVIGMISQYQ  333 (362)
Q Consensus       308 ~-----------~~~~~~~~l~~--~G~~v~~G~~~~~~  333 (362)
                      +           .....++.+.+  .++||.+++...+.
T Consensus        77 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~  115 (267)
T 3ay3_A           77 RPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIG  115 (267)
T ss_dssp             CCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGST
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhC
Confidence            1           11233444433  36999998876543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.90  E-value=0.066  Score=50.95  Aligned_cols=96  Identities=14%  Similarity=0.173  Sum_probs=70.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      +.+|+|.| .|-+|+.+++.++..|.+|++++.++++.+.+++.|...++ .+..+ .+.++...-..+|+|+-+++.+.
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~-GDat~-~~~L~~agi~~A~~viv~~~~~~   80 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFY-GDATR-MDLLESAGAAKAEVLINAIDDPQ   80 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEE-SCTTC-HHHHHHTTTTTCSEEEECCSSHH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEE-cCCCC-HHHHHhcCCCccCEEEECCCChH
Confidence            45799999 69999999999999999999999999999999998876443 22222 22344444467999999999632


Q ss_pred             ----HHHHHHHhccCCEEEEEcC
Q 018013          310 ----FNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       310 ----~~~~~~~l~~~G~~v~~G~  328 (362)
                          +-...+.+.+.-+++.-..
T Consensus        81 ~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           81 TNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHHhCCCCeEEEEEC
Confidence                2344455667767766544

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=95.90  E-value=0.025  Score=53.03  Aligned_cols=79  Identities=23%  Similarity=0.168  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCchHHHHHH-HHHHHCCCEEEEecCCHh----------------HHHHHHHcCCc-EEEeCC--C-ccH
Q 018013          228 ASGKKVLVTAAAGGTGQFAV-QLAKLAGNTVVATCGGEH----------------KAQLLKELGVD-RVINYK--A-EDI  286 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~ai-qla~~~G~~Vi~~~~~~~----------------~~~~l~~~g~~-~v~~~~--~-~~~  286 (362)
                      ..++++||+|+++|+|++.. .+|...|+.++++....+                -.+.+++.|.. ..++-+  + +..
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            56899999999999999854 556577998888765322                12345667765 334333  2 223


Q ss_pred             HHHHHHH--CCCceeEEEECCC
Q 018013          287 KTVFKEE--FPKGFDIIYESVG  306 (362)
Q Consensus       287 ~~~~~~~--~~~g~Dvvid~~g  306 (362)
                      .+.+...  ..+++|+++++++
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A  149 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLA  149 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCC
T ss_pred             HHHHHHHHHhcCCCCEEEEecc
Confidence            3333332  2367999999987

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.89  E-value=0.032  Score=51.89  Aligned_cols=91  Identities=18%  Similarity=0.139  Sum_probs=65.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~-~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      -.|++|.|+| .|.+|..+++.++ ..|.+|++.+++.++.+...++|+..+     .++.+.+.     ..|+|+.++.
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~-----~aDvVil~vp  229 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-----DSLEELAR-----RSDCVSVSVP  229 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHHH-----HCSEEEECCC
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-----CCHHHHhc-----cCCEEEEeCC
Confidence            5688999999 7999999999999 999999999988766666666675421     23444332     3688888876


Q ss_pred             h-----HHH-HHHHHHhccCCEEEEEcCc
Q 018013          307 G-----DMF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       307 ~-----~~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                      .     ..+ ...+..|+++..||.++.-
T Consensus       230 ~~~~t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          230 YMKLTHHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             CSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             CChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            3     122 3566778888777776654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=95.89  E-value=0.0052  Score=53.62  Aligned_cols=75  Identities=16%  Similarity=0.247  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHH
Q 018013          229 SGKKVLVTAA----------------AGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFK  291 (362)
Q Consensus       229 ~g~~VlI~ga----------------~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~  291 (362)
                      .|++|||+||                +|.+|.+.++.+...|++|+.+.+...... ....+. .+++... .++.+.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~~~~~-~~~~v~s~~em~~~v~   79 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-EPHPNL-SIREITNTKDLLIEMQ   79 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CCCTTE-EEEECCSHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-cCCCCe-EEEEHhHHHHHHHHHH
Confidence            5899999998                788999999999999999999988543110 000122 3444443 33334444


Q ss_pred             HHCCCceeEEEECCC
Q 018013          292 EEFPKGFDIIYESVG  306 (362)
Q Consensus       292 ~~~~~g~Dvvid~~g  306 (362)
                      ... +++|++|.+++
T Consensus        80 ~~~-~~~Dili~aAA   93 (232)
T 2gk4_A           80 ERV-QDYQVLIHSMA   93 (232)
T ss_dssp             HHG-GGCSEEEECSB
T ss_pred             Hhc-CCCCEEEEcCc
Confidence            333 46999999988

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.87  E-value=0.076  Score=48.49  Aligned_cols=81  Identities=17%  Similarity=0.197  Sum_probs=54.3

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCC---HhHHHHHH-H----cCCc-EEEeCCCcc-HHH
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGG---EHKAQLLK-E----LGVD-RVINYKAED-IKT  288 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~---~~~~~~l~-~----~g~~-~v~~~~~~~-~~~  288 (362)
                      +|..... -.+++++|.| +|+.|.+++..+...|+ +|+++.|+   .+|.+.+. +    .+.. .+++..+.+ +.+
T Consensus       138 ~L~~~~~~l~gk~~lVlG-AGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~  216 (312)
T 3t4e_A          138 AIKESGFDMRGKTMVLLG-AGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE  216 (312)
T ss_dssp             HHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHhcCCCcCCCEEEEEC-cCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence            3444444 5689999999 59999999999999998 89999999   66666553 2    2332 233333311 122


Q ss_pred             HHHHHCCCceeEEEECCCh
Q 018013          289 VFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~g~  307 (362)
                      .+     ..+|+||||++-
T Consensus       217 ~l-----~~~DiIINaTp~  230 (312)
T 3t4e_A          217 AL-----ASADILTNGTKV  230 (312)
T ss_dssp             HH-----HHCSEEEECSST
T ss_pred             hc-----cCceEEEECCcC
Confidence            22     248999999873

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.86  E-value=0.022  Score=48.91  Aligned_cols=99  Identities=17%  Similarity=0.175  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHH---CC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEE---FP  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~---~~  295 (362)
                      .++++||=.|  .|.|..+..+++..  +++|++++.+++..+.+++    .|..   .++.   .+..+.+...   ..
T Consensus        57 ~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~~  131 (223)
T 3duw_A           57 QGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT---GLALDSLQQIENEKY  131 (223)
T ss_dssp             HTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHTTC
T ss_pred             hCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhcCC
Confidence            5778999998  34678888888876  5799999999988777653    4543   2222   2222222221   12


Q ss_pred             CceeEEEECCCh----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGG----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ..+|+||-....    ..++.+.+.|+++|.++.-.....
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~  171 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVRE  171 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence            459999865542    468888999999999987665543

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.85  E-value=0.016  Score=54.72  Aligned_cols=91  Identities=14%  Similarity=0.032  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      =.|++|.|+| .|.+|..+++.++.+|++|++.+++..+.+..+++|+..+     .++.+.+     ...|+|+.++..
T Consensus       189 l~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l~ell-----~~aDvV~l~~Pl  257 (393)
T 2nac_A          189 LEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATREDMY-----PVCDVVTLNCPL  257 (393)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHG-----GGCSEEEECSCC
T ss_pred             CCCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-----CCHHHHH-----hcCCEEEEecCC
Confidence            3688999999 8999999999999999999999987665566666776421     2333332     247888888762


Q ss_pred             -----HHH-HHHHHHhccCCEEEEEcCc
Q 018013          308 -----DMF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 -----~~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                           ..+ ...+..|+++..||.++.-
T Consensus       258 t~~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          258 HPETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             CTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             chHHHHHhhHHHHhhCCCCCEEEECCCc
Confidence                 123 4567788888888888753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.84  E-value=0.064  Score=47.80  Aligned_cols=86  Identities=13%  Similarity=0.061  Sum_probs=60.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCceeEEEECCChHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF  310 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~  310 (362)
                      +|.|+| +|.+|.+.+..+...|.+|+++++++++.+.+.+.|.. .+.+    +.    .+.  .+.|+||.|+.....
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~----~~----~~~--~~~D~vi~av~~~~~   70 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ----DL----SLL--QTAKIIFLCTPIQLI   70 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES----CG----GGG--TTCSEEEECSCHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccC----CH----HHh--CCCCEEEEECCHHHH
Confidence            688999 79999999998888899999999999988888877763 2221    11    112  357899998886554


Q ss_pred             HHHHHH----hccCCEEEEEcC
Q 018013          311 NLCLKA----LAVYGRLIVIGM  328 (362)
Q Consensus       311 ~~~~~~----l~~~G~~v~~G~  328 (362)
                      ...++.    ++++..++.++.
T Consensus        71 ~~~~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           71 LPTLEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HHHHHHHGGGSCTTCEEEECCS
T ss_pred             HHHHHHHHhhCCCCCEEEECCC
Confidence            444443    445556666544

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.83  E-value=0.07  Score=45.39  Aligned_cols=88  Identities=13%  Similarity=0.035  Sum_probs=59.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cC-----CcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LG-----VDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g-----~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      +|+|+|++|.+|...+..+...|.+|+++++++++.+.+.+ ++     .+..    ..++.+.+     .++|+||.|+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~~D~Vi~~~   72 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT----GMKNEDAA-----EACDIAVLTI   72 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE----EEEHHHHH-----HHCSEEEECS
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC----hhhHHHHH-----hcCCEEEEeC
Confidence            68999989999999998888889999999999888776643 33     2211    12343333     2489999999


Q ss_pred             ChHHHHHHHHHhc---cCCEEEEEcC
Q 018013          306 GGDMFNLCLKALA---VYGRLIVIGM  328 (362)
Q Consensus       306 g~~~~~~~~~~l~---~~G~~v~~G~  328 (362)
                      ........++.+.   ++-.++.+..
T Consensus        73 ~~~~~~~~~~~l~~~~~~~~vi~~~~   98 (212)
T 1jay_A           73 PWEHAIDTARDLKNILREKIVVSPLV   98 (212)
T ss_dssp             CHHHHHHHHHHTHHHHTTSEEEECCC
T ss_pred             ChhhHHHHHHHHHHHcCCCEEEEcCC
Confidence            9755554443332   3555665553

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.81  E-value=0.027  Score=52.00  Aligned_cols=89  Identities=15%  Similarity=0.081  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|..+++.++..|.+|++.+++.++.+.+.+.|+...      ++.+.+.     ..|+|+.++.. 
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~-----~aDvVi~~vp~~  221 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------STPELAA-----QSDFIVVACSLT  221 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHH-----HCSEEEECCCCC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------CHHHHHh-----hCCEEEEeCCCC
Confidence            478999999 7999999999999999999999987766665666665321      3333332     36888888763 


Q ss_pred             ----HHH-HHHHHHhccCCEEEEEcCc
Q 018013          308 ----DMF-NLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 ----~~~-~~~~~~l~~~G~~v~~G~~  329 (362)
                          ..+ ...++.|+++..+|.++.-
T Consensus       222 ~~t~~~i~~~~~~~mk~gailIn~srg  248 (330)
T 2gcg_A          222 PATEGLCNKDFFQKMKETAVFINISRG  248 (330)
T ss_dssp             TTTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred             hHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence                122 3566778888877776654

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.81  E-value=0.063  Score=50.94  Aligned_cols=94  Identities=15%  Similarity=0.158  Sum_probs=63.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC---CEEEEecCCHhHHHHHH-HcC------CcE-EEeCCC-ccHHHHHHHHCCCce
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAG---NTVVATCGGEHKAQLLK-ELG------VDR-VINYKA-EDIKTVFKEEFPKGF  298 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G---~~Vi~~~~~~~~~~~l~-~~g------~~~-v~~~~~-~~~~~~~~~~~~~g~  298 (362)
                      .+|+|+|+ |++|..+++.+...|   .+|++++++.++.+.+. +++      +.. .+|..+ +++.+.+...   ++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~   77 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KP   77 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CC
Confidence            47999996 999999999888887   49999999998877664 332      221 234333 3344444432   58


Q ss_pred             eEEEECCChH-HHHHHHHHhccCCEEEEEcC
Q 018013          299 DIIYESVGGD-MFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       299 Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~  328 (362)
                      |+|++|++.. .......+++.+-.++.+..
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             CEEEECCCcccChHHHHHHHHhCCCEEEecC
Confidence            9999999953 34445566777777776533

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.79  E-value=0.075  Score=46.75  Aligned_cols=76  Identities=21%  Similarity=0.234  Sum_probs=53.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCcEEEeCCCcc-HHHHHHHHCCCceeEEEECCCh
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~-~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      +|+|.|++|.+|+..++.+... +.++++.....+..+.+...++|.++|....+ ..+.+......|+++|+.++|-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            6899998899999999988765 78887665443333434334688888887643 4444444445678999998883

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.79  E-value=0.036  Score=48.13  Aligned_cols=92  Identities=16%  Similarity=0.176  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g-  306 (362)
                      +++++||=.|.  |.|..+..+++. |++|++++.+++..+.+++. . .++   ..+..+.......+.+|+|+.+.. 
T Consensus        40 ~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~-~-~~~---~~d~~~~~~~~~~~~fD~i~~~~~l  111 (240)
T 3dli_A           40 KGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCEGK-F-NVV---KSDAIEYLKSLPDKYLDGVMISHFV  111 (240)
T ss_dssp             TTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT-S-EEE---CSCHHHHHHTSCTTCBSEEEEESCG
T ss_pred             cCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh-c-cee---eccHHHHhhhcCCCCeeEEEECCch
Confidence            67899999983  345566666665 88999999999988888765 2 222   233333332234467999987532 


Q ss_pred             --------hHHHHHHHHHhccCCEEEEEc
Q 018013          307 --------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       307 --------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                              ...++.+.+.|+++|+++..-
T Consensus       112 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A          112 EHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             GGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             hhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence                    246788899999999988754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=95.77  E-value=0.018  Score=56.52  Aligned_cols=91  Identities=15%  Similarity=0.160  Sum_probs=60.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+.+.       ...|..+. +.+     .-.++|+||++++.. 
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~-------v~~d~~~~-~~~-----~l~~~D~Vih~A~~~~  213 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK-------RFWDPLNP-ASD-----LLDGADVLVHLAGEPI  213 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC-------EECCTTSC-CTT-----TTTTCSEEEECCCC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc-------eeecccch-hHH-----hcCCCCEEEECCCCcc
Confidence            7899999999999999999999999999999998664211       12222221 111     114799999998731 


Q ss_pred             ------------------HHHHHHHH-hcc--CCEEEEEcCccccc
Q 018013          309 ------------------MFNLCLKA-LAV--YGRLIVIGMISQYQ  333 (362)
Q Consensus       309 ------------------~~~~~~~~-l~~--~G~~v~~G~~~~~~  333 (362)
                                        .....++. .+.  -++||.+++.+.|.
T Consensus       214 ~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg  259 (516)
T 3oh8_A          214 FGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG  259 (516)
T ss_dssp             ---CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence                              02233444 222  25899998876554

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.77  E-value=0.11  Score=47.56  Aligned_cols=89  Identities=16%  Similarity=0.140  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      ...+|.|+| .|.+|...++.+...|.+|++.++++++.+.+.+.|+...     .+..+.+     ...|+||.|+.. 
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~e~~-----~~aDvVi~~vp~~   98 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-----EQARAAA-----RDADIVVSMLENG   98 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-----SSHHHHH-----TTCSEEEECCSSH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-----CCHHHHH-----hcCCEEEEECCCH
Confidence            456899998 7999999999999999999999999999988887775322     2233332     246888888874 


Q ss_pred             HHHHHHH------HHhccCCEEEEEcC
Q 018013          308 DMFNLCL------KALAVYGRLIVIGM  328 (362)
Q Consensus       308 ~~~~~~~------~~l~~~G~~v~~G~  328 (362)
                      ..+...+      ..++++..+|.++.
T Consensus        99 ~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           99 AVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            3333333      34566666666654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.77  E-value=0.034  Score=57.51  Aligned_cols=108  Identities=16%  Similarity=0.188  Sum_probs=68.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEecCCHh---H----HHHHHHcCCcEEE---eCCC-ccHHHHHHHHC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAK-LAGN-TVVATCGGEH---K----AQLLKELGVDRVI---NYKA-EDIKTVFKEEF  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~-~~G~-~Vi~~~~~~~---~----~~~l~~~g~~~v~---~~~~-~~~~~~~~~~~  294 (362)
                      +++++++|+|++||+|.++++.+. ..|+ +|+.+.++..   +    .+.+++.|....+   |..+ +++.+.+....
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            478999999999999999988776 7999 5888888722   2    2334556775332   3333 33444444432


Q ss_pred             C-CceeEEEECCCh-----------HHHH-----------HHHHHhccCCEEEEEcCcccccCC
Q 018013          295 P-KGFDIIYESVGG-----------DMFN-----------LCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       295 ~-~g~Dvvid~~g~-----------~~~~-----------~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      . ..+|++|+++|-           +.++           ...+.+.+.-+||.+++..+..+.
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l~iV~~SS~ag~~g~  671 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVSGVLGS  671 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTSEEEEEEETHHHHTC
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEccHHhcCCC
Confidence            1 379999999882           1122           122333333489999887765543

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.76  E-value=0.014  Score=53.91  Aligned_cols=90  Identities=17%  Similarity=0.050  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|..+++.++.+|++|++.+++..+.+...++|+..      .++.+.+.     ..|+|+.++.. 
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~------~~l~ell~-----~aDvV~l~~P~t  211 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ------VACSELFA-----SSDFILLALPLN  211 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE------CCHHHHHH-----HCSEEEECCCCS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee------CCHHHHHh-----hCCEEEEcCCCC
Confidence            578999999 899999999999999999999998865555566666521      13444433     36888888762 


Q ss_pred             -H---H-HHHHHHHhccCCEEEEEcCcc
Q 018013          308 -D---M-FNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -~---~-~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +   . -...+..|+++..||.++.-+
T Consensus       212 ~~t~~li~~~~l~~mk~gailIN~arg~  239 (330)
T 4e5n_A          212 ADTLHLVNAELLALVRPGALLVNPCRGS  239 (330)
T ss_dssp             TTTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred             HHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence             1   2 246778888888888887643

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.76  E-value=0.019  Score=51.46  Aligned_cols=88  Identities=16%  Similarity=0.127  Sum_probs=63.7

Q ss_pred             HHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          217 TASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       217 tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .+...|+.... -.|++++|.|.++-+|..+++++...|++|+++.+..                   .++.+.+     
T Consensus       146 gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-------------------~~L~~~~-----  201 (285)
T 3p2o_A          146 GVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------------KDLSLYT-----  201 (285)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SCHHHHH-----
T ss_pred             HHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-------------------hhHHHHh-----
Confidence            34555666665 6899999999767799999999999999998876532                   2333332     


Q ss_pred             CceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          296 KGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       296 ~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +..|+||.++|.. .+.  -+.++++-.+|.+|...
T Consensus       202 ~~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          202 RQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             TTCSEEEECSSCTTCBC--GGGSCTTEEEEECCCEE
T ss_pred             hcCCEEEECCCCCCcCC--HHHcCCCeEEEEeccCc
Confidence            3479999998853 222  24568888888888764

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.75  E-value=0.044  Score=51.20  Aligned_cols=88  Identities=13%  Similarity=0.144  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|..+++.++.+|++|++.+++. +.+.+.+.|+..      .++.+.+.     ..|+|+.++.. 
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~------~~l~ell~-----~aDvV~l~~Plt  241 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENGVEP------ASLEDVLT-----KSDFIFVVAAVT  241 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTTCEE------CCHHHHHH-----SCSEEEECSCSS
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcCeee------CCHHHHHh-----cCCEEEEcCcCC
Confidence            378999999 89999999999999999999999874 344555667631      23444432     37999988662 


Q ss_pred             -H---H-HHHHHHHhccCCEEEEEcCc
Q 018013          308 -D---M-FNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 -~---~-~~~~~~~l~~~G~~v~~G~~  329 (362)
                       +   . -...+..|+++..||.++.-
T Consensus       242 ~~T~~li~~~~l~~mk~gailIN~aRG  268 (365)
T 4hy3_A          242 SENKRFLGAEAFSSMRRGAAFILLSRA  268 (365)
T ss_dssp             CC---CCCHHHHHTSCTTCEEEECSCG
T ss_pred             HHHHhhcCHHHHhcCCCCcEEEECcCC
Confidence             1   1 24677889999999998753

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.73  E-value=0.029  Score=50.68  Aligned_cols=88  Identities=14%  Similarity=0.098  Sum_probs=63.9

Q ss_pred             HHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          218 ASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       218 A~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ....|+.... -.|++++|.|++.-+|.-+++++...|++|+++.+.                   ..++.+.+     +
T Consensus       152 i~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-------------------t~~L~~~~-----~  207 (301)
T 1a4i_A          152 CLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK-------------------TAHLDEEV-----N  207 (301)
T ss_dssp             HHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------------CSSHHHHH-----T
T ss_pred             HHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC-------------------cccHHHHh-----c
Confidence            4445555555 689999999976678999999999999999987542                   23444443     3


Q ss_pred             ceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ..|+||.++|...+ .--+.++++-.+|.+|...
T Consensus       208 ~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          208 KGDILVVATGQPEM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCBC
T ss_pred             cCCEEEECCCCccc-CCHHHcCCCcEEEEccCCC
Confidence            48999999996422 1123478999999999864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=95.71  E-value=0.028  Score=52.25  Aligned_cols=31  Identities=13%  Similarity=0.133  Sum_probs=28.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC-EEEEecC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGN-TVVATCG  262 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~  262 (362)
                      +|||+||+|.+|..++..+...|. +|+..++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            699999999999999998888898 9999887

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.71  E-value=0.031  Score=50.16  Aligned_cols=88  Identities=19%  Similarity=0.147  Sum_probs=63.9

Q ss_pred             HHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          218 ASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       218 A~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ....|+.... -.|++++|.|++.-+|.-+++++...|++|+++.+..                   .++.+.++     
T Consensus       146 i~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~L~~~~~-----  201 (288)
T 1b0a_A          146 IVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------------KNLRHHVE-----  201 (288)
T ss_dssp             HHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------------SCHHHHHH-----
T ss_pred             HHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------hhHHHHhc-----
Confidence            4455666665 7899999999766789999999999999999886432                   34444443     


Q ss_pred             ceeEEEECCChHHHHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGGDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ..|+||.++|...+ .--+.++++-.+|.+|...
T Consensus       202 ~ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          202 NADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HCSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             cCCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence            37999999985421 1123368889999999864

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.70  E-value=0.037  Score=51.09  Aligned_cols=88  Identities=16%  Similarity=0.117  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD  308 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~  308 (362)
                      .|++|.|+| .|.+|..+++.++.+|++|++.+++.++.  +++. +..    . .++.+.+.     ..|+|+.++...
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~~-~~~----~-~~l~ell~-----~aDvV~l~~p~~  210 (333)
T 1j4a_A          145 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEKK-GYY----V-DSLDDLYK-----QADVISLHVPDV  210 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHT-TCB----C-SCHHHHHH-----HCSEEEECSCCC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchh--HHhh-Cee----c-CCHHHHHh-----hCCEEEEcCCCc
Confidence            478999999 79999999999999999999999877654  2332 221    1 23444432     479999998731


Q ss_pred             -----HH-HHHHHHhccCCEEEEEcCcc
Q 018013          309 -----MF-NLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       309 -----~~-~~~~~~l~~~G~~v~~G~~~  330 (362)
                           .+ ...+..|++++.+|.++.-+
T Consensus       211 ~~t~~li~~~~l~~mk~ga~lIn~arg~  238 (333)
T 1j4a_A          211 PANVHMINDESIAKMKQDVVIVNVSRGP  238 (333)
T ss_dssp             GGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             HHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence                 12 45678899999999887743

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.69  E-value=0.032  Score=50.42  Aligned_cols=91  Identities=15%  Similarity=0.207  Sum_probs=63.6

Q ss_pred             HHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          216 LTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       216 ~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      ..+...|+.... -.|++++|.|.++-+|..+++++...|++|+++.+.....+                 +.+.+    
T Consensus       150 ~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-----------------l~~~~----  208 (300)
T 4a26_A          150 KGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-----------------MIDYL----  208 (300)
T ss_dssp             HHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-----------------HHHHH----
T ss_pred             HHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-----------------hhhhh----
Confidence            334556666666 78999999997666999999999999999998876322111                 00222    


Q ss_pred             CCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          295 PKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       295 ~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +..|+||.++|.. .+..  +.++++-.+|.+|...
T Consensus       209 -~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~  242 (300)
T 4a26_A          209 -RTADIVIAAMGQPGYVKG--EWIKEGAAVVDVGTTP  242 (300)
T ss_dssp             -HTCSEEEECSCCTTCBCG--GGSCTTCEEEECCCEE
T ss_pred             -ccCCEEEECCCCCCCCcH--HhcCCCcEEEEEeccC
Confidence             2378999998853 2222  3478888999998764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.67  E-value=0.039  Score=49.18  Aligned_cols=87  Identities=15%  Similarity=0.136  Sum_probs=62.7

Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCC
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      .....|+... -.|++++|.|.++-+|..+++++...|++|+++.+.                   ..++.+.++     
T Consensus       138 gv~~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~-------------------t~~L~~~~~-----  192 (276)
T 3ngx_A          138 AVIDIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK-------------------TKDIGSMTR-----  192 (276)
T ss_dssp             HHHHHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------------CSCHHHHHH-----
T ss_pred             HHHHHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC-------------------cccHHHhhc-----
Confidence            3444555555 689999999976679999999999999999988652                   234444433     


Q ss_pred             ceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          297 GFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       297 g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ..|+||.++|.. .+..  +.++++-.+|.+|...
T Consensus       193 ~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          193 SSKIVVVAVGRPGFLNR--EMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HSSEEEECSSCTTCBCG--GGCCTTCEEEECCCEE
T ss_pred             cCCEEEECCCCCccccH--hhccCCcEEEEeccCc
Confidence            379999998853 2222  3468888999998765

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.62  E-value=0.16  Score=47.33  Aligned_cols=92  Identities=17%  Similarity=0.132  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      ..+|.|+| .|.+|...++.+...|.+|++.++++++.+.+.+.|+..     ..+..+.+...  ..+|+||-|+....
T Consensus        22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-----~~s~~e~~~~a--~~~DvVi~~vp~~~   93 (358)
T 4e21_A           22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG-----ARSIEEFCAKL--VKPRVVWLMVPAAV   93 (358)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC-----CSSHHHHHHHS--CSSCEEEECSCGGG
T ss_pred             CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE-----eCCHHHHHhcC--CCCCEEEEeCCHHH
Confidence            46899999 899999999999999999999999999999888776531     23444444321  23599999988644


Q ss_pred             HHHHH----HHhccCCEEEEEcCc
Q 018013          310 FNLCL----KALAVYGRLIVIGMI  329 (362)
Q Consensus       310 ~~~~~----~~l~~~G~~v~~G~~  329 (362)
                      ....+    ..++++-.+|.++..
T Consensus        94 v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           94 VDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHHHhhCCCCCEEEeCCCC
Confidence            44333    345556666665543

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.62  E-value=0.096  Score=44.33  Aligned_cols=94  Identities=16%  Similarity=0.121  Sum_probs=60.9

Q ss_pred             HhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc-CC----------------c-EEE--eCCC
Q 018013          224 QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL-GV----------------D-RVI--NYKA  283 (362)
Q Consensus       224 ~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~-g~----------------~-~v~--~~~~  283 (362)
                      .....++.+||-.| + |.|..+..+++. |++|++++.+++-.+.+++. ..                . .++  |..+
T Consensus        17 ~l~~~~~~~vLD~G-C-G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~   93 (203)
T 1pjz_A           17 SLNVVPGARVLVPL-C-GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   93 (203)
T ss_dssp             HHCCCTTCEEEETT-T-CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             hcccCCCCEEEEeC-C-CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence            34446889999998 3 346667777776 89999999999988888642 21                1 121  2222


Q ss_pred             ccHHHHHHHHCCCceeEEEECCC-----h----HHHHHHHHHhccCCEEEEE
Q 018013          284 EDIKTVFKEEFPKGFDIIYESVG-----G----DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       284 ~~~~~~~~~~~~~g~Dvvid~~g-----~----~~~~~~~~~l~~~G~~v~~  326 (362)
                      .....      .+.+|+|++...     .    ..++.+.+.|++||+++.+
T Consensus        94 l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           94 LTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             STHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             CCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            22211      035999997432     1    2567888999999994333

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.60  E-value=0.036  Score=51.18  Aligned_cols=87  Identities=22%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|++|.|+| .|.+|..+++.++..|.+|++.+++.++ +...++|+..      .++.+.+.     ..|+|+.++..
T Consensus       144 l~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~------~~l~e~l~-----~aDiVil~vp~  210 (333)
T 2d0i_A          144 LYGKKVGILG-MGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARY------MDIDELLE-----KSDIVILALPL  210 (333)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEE------CCHHHHHH-----HCSEEEECCCC
T ss_pred             CCcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee------cCHHHHHh-----hCCEEEEcCCC
Confidence            4578999999 7999999999999999999999998776 5555666421      13333332     37888888774


Q ss_pred             H-----HH-HHHHHHhccCCEEEEEcC
Q 018013          308 D-----MF-NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       308 ~-----~~-~~~~~~l~~~G~~v~~G~  328 (362)
                      .     .+ ...+..|+++ .++.++.
T Consensus       211 ~~~t~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          211 TRDTYHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             CTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred             ChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence            2     22 2456778888 7777663

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=95.59  E-value=0.057  Score=48.19  Aligned_cols=92  Identities=20%  Similarity=0.207  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc----CCc---EEEeCCCccHHHHHHHHCCCcee
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL----GVD---RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~----g~~---~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      .+++.+||-.| + |.|..+..+++..|++|++++.+++..+.+++.    |..   .++..+-.+       . .+.+|
T Consensus        62 ~~~~~~vLDiG-c-G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~-~~~fD  131 (287)
T 1kpg_A           62 LQPGMTLLDVG-C-GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-------F-DEPVD  131 (287)
T ss_dssp             CCTTCEEEEET-C-TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-------C-CCCCS
T ss_pred             CCCcCEEEEEC-C-cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh-------C-CCCee
Confidence            38899999998 3 347788888877799999999999888877642    321   222221111       1 25699


Q ss_pred             EEEEC-----CC----hHHHHHHHHHhccCCEEEEEcC
Q 018013          300 IIYES-----VG----GDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       300 vvid~-----~g----~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      +|+..     .+    ...++.+.+.|+++|+++....
T Consensus       132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            99875     22    2568889999999999987654

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.57  E-value=0.025  Score=46.94  Aligned_cols=97  Identities=21%  Similarity=0.193  Sum_probs=64.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCCCceeE
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      .+++++||=.| + |.|..+..+++. +.+|++++.+++..+.+++    .|.+  .++.....++    .....+.+|+
T Consensus        20 ~~~~~~vLDiG-c-G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l----~~~~~~~fD~   92 (185)
T 3mti_A           20 LDDESIVVDAT-M-GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL----DHYVREPIRA   92 (185)
T ss_dssp             CCTTCEEEESC-C-TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG----GGTCCSCEEE
T ss_pred             CCCCCEEEEEc-C-CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH----HhhccCCcCE
Confidence            37899999888 3 347778888877 8899999999988877753    4543  2333211211    1122456999


Q ss_pred             EEECCCh----------------HHHHHHHHHhccCCEEEEEcCcc
Q 018013          301 IYESVGG----------------DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       301 vid~~g~----------------~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      |+-+.+-                ..++.+.+.|+++|+++.+....
T Consensus        93 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~  138 (185)
T 3mti_A           93 AIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG  138 (185)
T ss_dssp             EEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred             EEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence            9866321                24578889999999999876543

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.57  E-value=0.085  Score=48.82  Aligned_cols=93  Identities=15%  Similarity=0.110  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      -.+|.|+| .|.+|...+..++..|.+|++.++++++.+.++++|+...     .+..+.+... ..+.|+||-|+....
T Consensus         8 ~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~-----~~~~e~~~~a-~~~aDlVilavP~~~   80 (341)
T 3ktd_A            8 SRPVCILG-LGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVS-----ADLEATLQRA-AAEDALIVLAVPMTA   80 (341)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEE-----SCHHHHHHHH-HHTTCEEEECSCHHH
T ss_pred             CCEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeee-----CCHHHHHHhc-ccCCCEEEEeCCHHH
Confidence            46799999 7999999999999999999999999999998888887432     2233333211 123688888887543


Q ss_pred             HHHHHHH---hccCCEEEEEcCc
Q 018013          310 FNLCLKA---LAVYGRLIVIGMI  329 (362)
Q Consensus       310 ~~~~~~~---l~~~G~~v~~G~~  329 (362)
                      +...++.   ++++..++.+++.
T Consensus        81 ~~~vl~~l~~~~~~~iv~Dv~Sv  103 (341)
T 3ktd_A           81 IDSLLDAVHTHAPNNGFTDVVSV  103 (341)
T ss_dssp             HHHHHHHHHHHCTTCCEEECCSC
T ss_pred             HHHHHHHHHccCCCCEEEEcCCC
Confidence            3333322   3455556566554

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.55  E-value=0.012  Score=51.70  Aligned_cols=97  Identities=18%  Similarity=0.130  Sum_probs=66.8

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~~  295 (362)
                      .....+++.+||-.| +| .|..+..+++..|++|++++.+++..+.+++    .|..   .+...+..++      ...
T Consensus        30 ~~~~~~~~~~VLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~  101 (256)
T 1nkv_A           30 RVLRMKPGTRILDLG-SG-SGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY------VAN  101 (256)
T ss_dssp             HHTCCCTTCEEEEET-CT-TCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC------CCS
T ss_pred             HhcCCCCCCEEEEEC-CC-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC------CcC
Confidence            334448899999998 33 4788889998889999999999888777753    3432   2222221111      113


Q ss_pred             CceeEEEECCC-------hHHHHHHHHHhccCCEEEEEc
Q 018013          296 KGFDIIYESVG-------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       296 ~g~Dvvid~~g-------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +.+|+|+....       ...++.+.++|+++|+++...
T Consensus       102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          102 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            56999986322       246888889999999998864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=95.55  E-value=0.054  Score=49.67  Aligned_cols=99  Identities=19%  Similarity=0.186  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHH-HHHHHc-C-Cc-EEEeCCCccHHHHHHHHCCCceeEEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKA-QLLKEL-G-VD-RVINYKAEDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~-~~l~~~-g-~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid  303 (362)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++..+. +.+..+ + .. .++..+-.+       ..-.++|+||+
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-------~~~~~~d~vih   97 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-------PLYIEVDQIYH   97 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-------CCCCCCSEEEE
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCC-------hhhcCCCEEEE
Confidence            3568999999999999999998888899999998753211 111111 1 11 222221111       01246999999


Q ss_pred             CCChH-----------H-------HHHHHHHhc-cCCEEEEEcCccccc
Q 018013          304 SVGGD-----------M-------FNLCLKALA-VYGRLIVIGMISQYQ  333 (362)
Q Consensus       304 ~~g~~-----------~-------~~~~~~~l~-~~G~~v~~G~~~~~~  333 (362)
                      +++..           .       ....++.+. .+.+||.+++...+.
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g  146 (343)
T 2b69_A           98 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG  146 (343)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred             CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhC
Confidence            98721           0       112233332 346999998876543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=95.55  E-value=0.071  Score=59.42  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHHCCCEEEEe-cCCHhHHHHH-----HHc---CCc-EEE--eCCC-ccHHHHHHHH
Q 018013          228 ASGKKVLVTAAAGG-TGQFAVQLAKLAGNTVVAT-CGGEHKAQLL-----KEL---GVD-RVI--NYKA-EDIKTVFKEE  293 (362)
Q Consensus       228 ~~g~~VlI~ga~g~-vG~~aiqla~~~G~~Vi~~-~~~~~~~~~l-----~~~---g~~-~v~--~~~~-~~~~~~~~~~  293 (362)
                      -.|+++||+||++| +|.++++.+...|++|+++ .++.++.+.+     +++   |.. .++  |..+ +++.+.+...
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            56899999999998 9999999988899999998 5655554332     222   433 222  3333 3344444432


Q ss_pred             CC-------C-ceeEEEECCC
Q 018013          294 FP-------K-GFDIIYESVG  306 (362)
Q Consensus       294 ~~-------~-g~Dvvid~~g  306 (362)
                      ..       + .+|++|+|+|
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCC
T ss_pred             HHhccccccCCCCeEEEECCC
Confidence            11       2 5999999987

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.55  E-value=0.027  Score=50.66  Aligned_cols=91  Identities=22%  Similarity=0.317  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHc-----CC---------c--EEEeCCCccHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKEL-----GV---------D--RVINYKAEDIKTVF  290 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~-----g~---------~--~v~~~~~~~~~~~~  290 (362)
                      ..+++||+.|+  |.|..+..+++. +. +|++++.+++-.+.+++.     +.         .  .++.   .+..+.+
T Consensus        74 ~~~~~VLdiG~--G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~---~D~~~~l  147 (281)
T 1mjf_A           74 PKPKRVLVIGG--GDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GDGFEFI  147 (281)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SCHHHHH
T ss_pred             CCCCeEEEEcC--CcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE---CchHHHh
Confidence            45689999993  446677777777 64 999999999888887753     21         1  2222   3333434


Q ss_pred             HHHCCCceeEEEECCC-----------hHHHHHHHHHhccCCEEEEE
Q 018013          291 KEEFPKGFDIIYESVG-----------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g-----------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      ..  .+.+|+|+-...           .+.++.+.+.|+++|.++..
T Consensus       148 ~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          148 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             cc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            33  467999885442           34688899999999999875

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=95.54  E-value=0.062  Score=49.11  Aligned_cols=90  Identities=13%  Similarity=0.048  Sum_probs=60.5

Q ss_pred             CEEEEEcCCchHHHHHHHHH-H-HCCCEEEEe-cCCHhH--HHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQFAVQLA-K-LAGNTVVAT-CGGEHK--AQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla-~-~~G~~Vi~~-~~~~~~--~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      -+|.|+| +|.+|...+..+ + ..+.+++++ ++++++  .+..+++|....    ..++.+.+....+.++|+||+|+
T Consensus         5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~----~~~~e~ll~~~~~~~iDvV~~at   79 (312)
T 1nvm_B            5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT----YAGVEGLIKLPEFADIDFVFDAT   79 (312)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE----SSHHHHHHHSGGGGGEEEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc----cCCHHHHHhccCCCCCcEEEECC
Confidence            5799999 799999888877 4 456666554 445454  455567886532    13344444333346799999999


Q ss_pred             Ch-HHHHHHHHHhcc--CCEEEE
Q 018013          306 GG-DMFNLCLKALAV--YGRLIV  325 (362)
Q Consensus       306 g~-~~~~~~~~~l~~--~G~~v~  325 (362)
                      +. ...+.+..+++.  |..+++
T Consensus        80 p~~~h~~~a~~al~a~~Gk~Vi~  102 (312)
T 1nvm_B           80 SASAHVQNEALLRQAKPGIRLID  102 (312)
T ss_dssp             CHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             ChHHHHHHHHHHHHhCCCCEEEE
Confidence            96 456677778887  777776

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=95.53  E-value=0.081  Score=58.85  Aligned_cols=79  Identities=20%  Similarity=0.272  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHHCCCEEEEec-CCHhHHHH----H-HHc---CCcE-EE--eCCC-ccHHHHHHHH
Q 018013          228 ASGKKVLVTAAAGG-TGQFAVQLAKLAGNTVVATC-GGEHKAQL----L-KEL---GVDR-VI--NYKA-EDIKTVFKEE  293 (362)
Q Consensus       228 ~~g~~VlI~ga~g~-vG~~aiqla~~~G~~Vi~~~-~~~~~~~~----l-~~~---g~~~-v~--~~~~-~~~~~~~~~~  293 (362)
                      -.|+++||+||++| +|.++++.+...|++|++++ ++.++.+.    + +++   |... ++  |..+ +++.+.+...
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            46899999999998 99999999888999999984 54444322    2 233   4432 22  3333 3344444443


Q ss_pred             CC-----C-ceeEEEECCC
Q 018013          294 FP-----K-GFDIIYESVG  306 (362)
Q Consensus       294 ~~-----~-g~Dvvid~~g  306 (362)
                      ..     + .+|++|+|+|
T Consensus       730 ~~~~~~~G~~IDiLVnNAG  748 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAA  748 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCC
T ss_pred             HHhhcccCCCCcEEEeCcc
Confidence            22     2 5999999987

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.53  E-value=0.087  Score=47.24  Aligned_cols=84  Identities=11%  Similarity=0.096  Sum_probs=59.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF  310 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~  310 (362)
                      .+|.|+|++|.+|...+..+...|.+|+++++++++.+.+.+.|+..    .+  ..+.     -...|+||.|+....+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~----~~--~~~~-----~~~aDvVi~av~~~~~   80 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL----TD--GDGW-----IDEADVVVLALPDNII   80 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC----CC--SSGG-----GGTCSEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc----CC--HHHH-----hcCCCEEEEcCCchHH
Confidence            47999995599999999998889999999999999888887777432    11  1111     1357999999987655


Q ss_pred             HHHHHHh----ccCCEEEE
Q 018013          311 NLCLKAL----AVYGRLIV  325 (362)
Q Consensus       311 ~~~~~~l----~~~G~~v~  325 (362)
                      ...++.+    +++..++.
T Consensus        81 ~~v~~~l~~~l~~~~ivv~   99 (286)
T 3c24_A           81 EKVAEDIVPRVRPGTIVLI   99 (286)
T ss_dssp             HHHHHHHGGGSCTTCEEEE
T ss_pred             HHHHHHHHHhCCCCCEEEE
Confidence            6555544    34444444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	362
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	9e-15
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	1e-14
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	2e-13
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	7e-13
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-11
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	5e-11
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	3e-10
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	1e-09
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	1e-09
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-09
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	1e-09
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	2e-09
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-09
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	8e-09
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-08
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	1e-08
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	3e-08
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-08
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-08
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	4e-08
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	5e-08
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-07
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	4e-07
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	5e-07
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	1e-06
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	2e-06
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-06
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	3e-06
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	6e-06
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	8e-06
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	9e-06
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-05
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	4e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	5e-05
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	1e-04
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-04
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-04
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	2e-04
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	8e-04
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	8e-04
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.003
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	0.003
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	0.003
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.004

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 69.2 bits (168), Expect = 9e-15
 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 14/153 (9%)

Query: 213 TSGLTASIAL----EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ 268
           T+G TA++++    +         VLVT A GG G  AV +    G  VVA+ G    A 
Sbjct: 3   TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD 62

Query: 269 LLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM 328
            LK+LG   VI+ + +      K    + +    + VGG      L  +   G + V G+
Sbjct: 63  YLKQLGASEVISRE-DVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGL 121

Query: 329 ISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH 361
               +      P          + +  +++ I 
Sbjct: 122 TGGGEVPATVYP---------FILRGVSLLGID 145

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.3 bits (168), Expect = 1e-14
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 210 AMLTSGLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGE 264
           A+   GLT+ I +++ G     S + ++V+ AAG  G  A Q+  L G    V      E
Sbjct: 8   AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE 67

Query: 265 HKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
               L  ELG D  +NYK  ++    +E  P G D+ +++VGGD+ N  +  +     +I
Sbjct: 68  KCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHII 127

Query: 325 VIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV 357
           + G ISQY  +  + P   P +      ++ T 
Sbjct: 128 LCGQISQYNKDVPYPPPLPPAVEAIRKERNITR 160

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 65.7 bits (159), Expect = 2e-13
 Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 5/138 (3%)

Query: 207 EVVAMLTSGLTASIAL----EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           E +A+ T+G TA++++    E         VLVT A GG G  AV +    G TV A+ G
Sbjct: 5   EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG 64

Query: 263 GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGR 322
              +   L+ LG   V+  +    + +   +    +    + VGG      L  +   G 
Sbjct: 65  KAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQ-RWAAAVDPVGGRTLATVLSRMRYGGA 123

Query: 323 LIVIGMISQYQGEHGWQP 340
           + V G+    +      P
Sbjct: 124 VAVSGLTGGAEVPTTVHP 141

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 64.3 bits (155), Expect = 7e-13
 Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 12/152 (7%)

Query: 207 EVVAMLTSGLTASIAL-EQAGPASGKKVLV-TAAAGGTGQFAVQLAKLAGNTVVATCGGE 264
           +   +  + LTA + L        GK   +        G++A Q+ KL     ++     
Sbjct: 5   QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 64

Query: 265 HKAQLLK----ELGVDRVINYKAEDIKTVFKE------EFPKGFDIIYESVGGDMFNLCL 314
                +     ELG  +VI     + +           +      +    VGG       
Sbjct: 65  PNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIA 124

Query: 315 KALAVYGRLIVIGMISQYQGEHGWQPSNYPGL 346
           + L   G ++  G +S            +   
Sbjct: 125 RKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNF 156

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 58.8 bits (141), Expect = 5e-11
 Identities = 24/138 (17%), Positives = 38/138 (27%), Gaps = 3/138 (2%)

Query: 204 PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           P  +V  +     T   A    A    G    V    G      +       + ++    
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 263 GEHKAQLLKELGVDRVINYKAE--DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVY 320
            + K    KE G    IN +     I+ V  E    G D  +E +G              
Sbjct: 62  NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 121

Query: 321 GRLIVIGMISQYQGEHGW 338
           G  + + +     GE   
Sbjct: 122 GWGVSVVVGVAASGEEIA 139

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 58.4 bits (140), Expect = 5e-11
 Identities = 34/135 (25%), Positives = 47/135 (34%), Gaps = 6/135 (4%)

Query: 207 EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK 266
            V  +L +G+T    L       GKKV V    G      ++LA   G  VVA    E K
Sbjct: 8   AVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLG-HMGIKLAHAMGAHVVAFTTSEAK 66

Query: 267 AQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNL-CLKALAVYGRLIV 325
            +  K LG D V+N +  D          K FD I  +V            L   G + +
Sbjct: 67  REAAKALGADEVVNSRNAD----EMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTL 122

Query: 326 IGMISQYQGEHGWQP 340
           +G  +          
Sbjct: 123 VGAPATPHKSPEVFN 137

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 56.4 bits (135), Expect = 3e-10
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 207 EVVAMLTSGLTA---SIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           + + + T+G TA    +ALE AG      +++VT A+GG G  AV L    G  VVA  G
Sbjct: 5   KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG 64

Query: 263 GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGR 322
            E   + LK LG  RV+           +++    +    ++VG  +    L  +   G 
Sbjct: 65  RESTHEYLKSLGASRVLPRDEFAESRPLEKQ---VWAGAIDTVGDKVLAKVLAQMNYGGC 121

Query: 323 LIVIGMISQYQGEHGWQP 340
           +   G+   +       P
Sbjct: 122 VAACGLAGGFTLPTTVMP 139

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.6 bits (130), Expect = 1e-09
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 1/125 (0%)

Query: 204 PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG 263
           P      +L  GLT    L + G   GKKV +    GG G     ++K  G         
Sbjct: 2   PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIV-GLGGIGSMGTLISKAMGAETYVISRS 60

Query: 264 EHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRL 323
             K +   ++G D  I    E        +      +   S+    FN+  KA+ V GR+
Sbjct: 61  SRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRI 120

Query: 324 IVIGM 328
           + I +
Sbjct: 121 VSISI 125

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 54.9 bits (131), Expect = 1e-09
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 2/129 (1%)

Query: 204 PDPEVVAMLTSGLTA-SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           P   +  +     T     +           +   A        +       + ++A   
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 263 GEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYG 321
            E + +L K+LG   VIN K +D     KE    G +   ES G  ++    + AL + G
Sbjct: 62  VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 322 RLIVIGMIS 330
           ++ V+G   
Sbjct: 122 KIAVVGAPQ 130

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 54.6 bits (130), Expect = 1e-09
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 207 EVVAMLTSGLTASIALEQAGPA-SGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGE 264
           E+  +  +G+TA  A+++A         +     GG G  AVQL K+    TV+A    E
Sbjct: 8   EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKE 67

Query: 265 HKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRL 323
            K +L + LG D V++ + + +K V +    +G ++  + VG     +     L   GRL
Sbjct: 68  EKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRL 127

Query: 324 IVIGMISQYQ 333
           I++G   + +
Sbjct: 128 IIVGYGGELR 137

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 2/131 (1%)

Query: 207 EVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH 265
           E      + LTA  +L E    + G++VL+ +A GG G  AV +AK+ G  +  T G + 
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 266 KAQLLKELGVDRVINYKAEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
           K ++L  LGV+ V + ++ D      E     G D++  S+ G+     ++ LA  GR I
Sbjct: 62  KREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFI 121

Query: 325 VIGMISQYQGE 335
            +G    Y   
Sbjct: 122 ELGKKDVYADA 132

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 207 EVVAMLTSGLTASIALEQAGPA----SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           + + + T+G TA + +     A       +++VT A+GG G  AV L    G  VVA  G
Sbjct: 5   KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG 64

Query: 263 GEHKAQLLKELG 274
            E   + LK LG
Sbjct: 65  RESTHEYLKSLG 76

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 53.5 bits (127), Expect = 3e-09
 Identities = 24/162 (14%), Positives = 34/162 (20%), Gaps = 11/162 (6%)

Query: 204 PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           P   V  +     T   A    A    G    V           +         ++A   
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 263 GEHKAQLLKELGVDRVINYKAED--IKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVY 320
              K +  K  G    +N       I  V  +    G D   E VG            + 
Sbjct: 62  NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK 121

Query: 321 GRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG 362
           G               GW   +        L   +T      
Sbjct: 122 GW--------GVSVLVGWTDLHDVATRPIQLIAGRTWKGSMF 155

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 52.2 bits (124), Expect = 8e-09
 Identities = 27/129 (20%), Positives = 39/129 (30%), Gaps = 6/129 (4%)

Query: 206 PEVVAMLT-SGLTA-SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG 263
           P    ++     T    A+  A    G    V    G      V       + ++     
Sbjct: 2   PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 264 EHKAQLLKELGVDRVINYKAED--IKTVFKEEFPKGFDIIYESVGG--DMFNLCLKALAV 319
           + K     ELG    +N K  D  I  V  E+   G D   E  G    M N        
Sbjct: 62  KDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCG 121

Query: 320 YGRLIVIGM 328
            G  +V+G+
Sbjct: 122 SGVTVVLGL 130

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 20/141 (14%)

Query: 209 VAMLTSGL-TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHK 266
           +  L+  L T       AG   G  V V   AG  G  A   A+L G   V+       +
Sbjct: 4   LTCLSDILPTGYHGAVTAGVGPGSTVYVA-GAGPVGLAAAASARLLGAAVVIVGDLNPAR 62

Query: 267 AQLLKELGVDRVINYKAEDI-KTVFKEEFPKGFDIIYESVGGDM---------------- 309
               K  G +         + + +         D   ++VG +                 
Sbjct: 63  LAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATV 122

Query: 310 FNLCLKALAVYGRLIVIGMIS 330
            N  ++   V G++ + G+  
Sbjct: 123 LNSLMQVTRVAGKIGIPGLYV 143

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 5/139 (3%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            +  + VL+K+ ++G+N  D                      AG           +    
Sbjct: 27  DLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSNDPRFAEGDEV 86

Query: 173 VKVGTPAAIMTFGSYAEFTMVPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASG 230
           +       +   G  +E+  VP   ++P+ +     E +      +       +  P + 
Sbjct: 87  IATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGAL 146

Query: 231 KKVLVTAAAGGTGQFAVQL 249
           K +L     G      V+L
Sbjct: 147 KDILQNRIQGRV---IVKL 162

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 50.3 bits (119), Expect = 3e-08
 Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 8/155 (5%)

Query: 86  SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNF-SSGRYFSDG 144
           +F+  VV+     F      +       +    VLV++ ++ VN  D             
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMD---DLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKT 59

Query: 145 NDIGSRLPFDAGFEAVGLIA-AVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPV-A 202
                 +       +        GD V  +  G    +  FG Y+E+  +  + ++P+  
Sbjct: 60  YPFVPGIDLAGVVVSSQHPRFREGDEV--IATGYEIGVTHFGGYSEYARLHGEWLVPLPK 117

Query: 203 RPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA 237
             +     +  + L  ++     G   G+ V+  A
Sbjct: 118 GLERIAQEISLAELPQALKRILRGELRGRTVVRLA 152

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 50.7 bits (120), Expect = 3e-08
 Identities = 44/185 (23%), Positives = 65/185 (35%), Gaps = 44/185 (23%)

Query: 83  LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFS 142
           LP++ +  VVH      R   +KV  P      P  VLVKI  +GV  +D++ + G +  
Sbjct: 2   LPQTMKAAVVHAYGAPLRIEEVKVPLP-----GPGQVLVKIEASGVCHTDLHAAEGDWPV 56

Query: 143 DGNDIGSRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAI--------------------- 181
                    PF  G E VG +AAVG  V  VK G    I                     
Sbjct: 57  KPPL-----PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC 111

Query: 182 --------MTFGSYAEFTMVPSKHILPVARPD---PEVVAMLTSGLTASIALEQAGPASG 230
                      G YAE+ +    ++  +  P      +       +   +   +AG   G
Sbjct: 112 ESQQNTGYSVNGGYAEYVLADPNYVGIL--PKNVKATIHPGKLDDINQILDQMRAGQIEG 169

Query: 231 KKVLV 235
           + VL 
Sbjct: 170 RIVLE 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 50.4 bits (119), Expect = 3e-08
 Identities = 28/163 (17%), Positives = 50/163 (30%), Gaps = 12/163 (7%)

Query: 204 PDPEVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATC 261
           P  +V  +     T   +  + A    G    V    GG G   +   K AG   ++   
Sbjct: 2   PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV-FGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 262 GGEHKAQLLKELGVDRVINYK--AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
             + K    KE+G    +N +   + I+ V  E    G D  +E +G     +   +   
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 320 YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG 362
                  G+          Q  +   +   +L   +T      
Sbjct: 121 EAY----GVSVIVGVPPDSQNLSMNPM---LLLSGRTWKGAIF 156

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 50.1 bits (118), Expect = 4e-08
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)

Query: 207 EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK 266
           E+  +L +G+T    L+Q     G+ V ++   G  G  AVQ A+  G  V A    + K
Sbjct: 5   EIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGL-GHVAVQYARAMGLHVAAIDIDDAK 63

Query: 267 AQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
            +L ++LG    +N + ED     + +      ++  +V    F   +      G + ++
Sbjct: 64  LELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALV 123

Query: 327 GMISQY 332
           G+    
Sbjct: 124 GLPPGD 129

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 50.3 bits (119), Expect = 5e-08
 Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 41/185 (22%)

Query: 105 KVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGN--------DIGSRLPFDAG 156
           K++ P       + V++K++   +  SD +   GR  +                   D  
Sbjct: 22  KMQDPRGKK-IEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVE 80

Query: 157 FEAVGLIAAVGDSVNNVK-----------------------VGTPAAIMTFGSYAEFTMV 193
              +G + +V  +V   +                        G        G  AE+ +V
Sbjct: 81  NLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLV 140

Query: 194 PSK----HILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQL 249
           P        LP      E + +        I+L+ A    G        AG   +F +  
Sbjct: 141 PYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGYG-----EFDAGVPKKFVIDP 195

Query: 250 AKLAG 254
            K   
Sbjct: 196 HKTFS 200

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 48.4 bits (114), Expect = 2e-07
 Identities = 23/127 (18%), Positives = 36/127 (28%), Gaps = 2/127 (1%)

Query: 204 PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG 263
           P    V +     T     E A    G  V+V                     ++     
Sbjct: 2   PLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSR 61

Query: 264 EHKAQLLKELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDM-FNLCLKALAVYG 321
               +  K  G   ++NYK       V K    KG D +  + GG    +  +K +   G
Sbjct: 62  PICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGG 121

Query: 322 RLIVIGM 328
            +  I  
Sbjct: 122 IISNINY 128

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.5 bits (112), Expect = 4e-07
 Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 52/194 (26%)

Query: 83  LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFS 142
            PE FE + + +   ++++       P   P   + + +KI   GV  SD++ ++G +  
Sbjct: 3   YPEKFEGIAIQSHE-DWKNPKKTKYDPK--PFYDHDIDIKIEACGVCGSDIHCAAGHWG- 58

Query: 143 DGNDIGSRLPFDAGFEAVGLIAAVGDS-VNNVKVGTPAAIM------------------- 182
                  ++P   G E VG +  +G    + +KVG    +                    
Sbjct: 59  -----NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPY 113

Query: 183 -----------------TFGSYAEFTMVPSKHILPVARPD---PEVVAMLTSGLTASI-A 221
                            + G YA +  V    ++P+  P+    E + +  +G+  +   
Sbjct: 114 CTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPI--PENIWVETLPVGEAGVHEAFER 171

Query: 222 LEQAGPASGKKVLV 235
           +E+        ++ 
Sbjct: 172 MEKGDVRYRFTLVG 185

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 47.2 bits (111), Expect = 5e-07
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 205 DPEVVA-MLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           D +V+A  + SG TA  A  E     +GK V++  A        V    L    V+   G
Sbjct: 2   DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 61

Query: 263 GEHKAQLLKELGVDRVINYKAEDIKTVFKEEF----PKGFDIIYESVGG-DMFNLCLKAL 317
             ++ +L +E+G D  +N +   ++   K        +G D I E+ G         + L
Sbjct: 62  SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121

Query: 318 AVYGRLIVIGMIS 330
              G   V G+  
Sbjct: 122 RRGGFYSVAGVAV 134

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 45.5 bits (106), Expect = 1e-06
 Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 1/133 (0%)

Query: 207 EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK 266
           E   +  +G+T   AL+  G   G+ V +    G         AK  G  VVA   G+ K
Sbjct: 5   EAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQY-AKAMGLNVVAVDIGDEK 63

Query: 267 AQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
            +L KELG D V+N   ED     KE+       +  +V    F     ++   G  +++
Sbjct: 64  LELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLV 123

Query: 327 GMISQYQGEHGWQ 339
           G+  +      + 
Sbjct: 124 GLPPEEMPIPIFD 136

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 2/129 (1%)

Query: 207 EVVAMLTSGLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH 265
           +  A+     TA  AL   A   +G+ VLV  A+GG G  A Q+A+  G  ++ T G E 
Sbjct: 5   QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE 64

Query: 266 KAQLLKELGVDRVINYKAED-IKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLI 324
             +++ + G   V N++  + I  + K    KG DII E +     +  L  L+  GR+I
Sbjct: 65  GQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVI 124

Query: 325 VIGMISQYQ 333
           V+G     +
Sbjct: 125 VVGSRGTIE 133

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 3e-06
 Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 5/126 (3%)

Query: 207 EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EH 265
           E  A++        A  + G   G KVLV   AG  G   + +AK  G   V        
Sbjct: 4   EEGALIEPLSVGIHACRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTDLSAT 62

Query: 266 KAQLLKELGVDR---VINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGR 322
           +    KE+G D    +     ++I    + +     ++  E  G +            G 
Sbjct: 63  RLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGG 122

Query: 323 LIVIGM 328
            +V+  
Sbjct: 123 TLVLVG 128

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.7 bits (104), Expect = 3e-06
 Identities = 42/156 (26%), Positives = 60/156 (38%), Gaps = 14/156 (8%)

Query: 207 EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK 266
           E  A   S LTA +AL++A    G+KVLV AAAG  G  AVQ+A+  G  V+A      K
Sbjct: 5   EAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK 64

Query: 267 AQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 326
             L   LG +    Y     +           ++      G      L  LA  GRL+ I
Sbjct: 65  LALPLALGAEEAATYAEVPERAKAWGGLDLVLEVR-----GKEVEESLGLLAHGGRLVYI 119

Query: 327 GMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIHG 362
           G                P    +++ ++  V+    
Sbjct: 120 GAAEGE---------VAPIPPLRLMRRNLAVLGFWL 146

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 43.8 bits (102), Expect = 6e-06
 Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 7/131 (5%)

Query: 207 EVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK 266
           E  A+L        A  +AG   G  VLV   AG  G  +V  AK  G  VV T     +
Sbjct: 4   EEGALLEPLSVGVHACRRAGVQLGTTVLVI-GAGPIGLVSVLAAKAYGAFVVCTARSPRR 62

Query: 267 AQLLKELGVDRVINYKAEDIKTVFK-----EEFPKGFDIIYESVGGD-MFNLCLKALAVY 320
            ++ K  G D  +       +                ++  +  G +    + +      
Sbjct: 63  LEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG 122

Query: 321 GRLIVIGMISQ 331
           G L+++GM SQ
Sbjct: 123 GTLMLVGMGSQ 133

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 43.4 bits (101), Expect = 8e-06
 Identities = 42/165 (25%), Positives = 57/165 (34%), Gaps = 38/165 (23%)

Query: 109 PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRY--FSDGNDIGSRLPFDAGFEAV 160
           PL L        K   VL+K+  AGV  SDV+   GR+       D+G +LP   G E  
Sbjct: 12  PLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71

Query: 161 GLIAAVGDSVNNVKVG----------------------------TPAAIMTFGSYAEFTM 192
           G I  VGD V     G                                I   G+YAE+ +
Sbjct: 72  GKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVI 131

Query: 193 VPSKHILPVAR--PDPEVVAMLTSGLTASIALEQAGPASGKKVLV 235
           VP    +   R         M       +I   +   A G++VL+
Sbjct: 132 VPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQVLI 176

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 43.2 bits (100), Expect = 9e-06
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 3/126 (2%)

Query: 207 EVVAMLTSGLTASIALEQAGPASGKKVLVTAA-AGGTGQFAVQLAKLAGNTVVATCGGEH 265
           E   +  SG+T   A+ +A     K +LV  A  G           ++G T++     E 
Sbjct: 5   EAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 64

Query: 266 KAQLLKELGVDRVINYKAEDIKTVFKEEFPKG--FDIIYESVGGDMFNLCLKALAVYGRL 323
             +  K  G D VIN   +D     +          +I  +      ++  KALA  G+ 
Sbjct: 65  AVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKY 124

Query: 324 IVIGMI 329
           +++G+ 
Sbjct: 125 VMVGLF 130

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 27/157 (17%), Positives = 46/157 (29%), Gaps = 34/157 (21%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
             K + VL+++ + G+  SDV++          D   + P   G EA G +  VG +V +
Sbjct: 22  EPKEDEVLLQMAYVGICGSDVHYYEHGRI---ADFIVKDPMVIGHEASGTVVKVGKNVKH 78

Query: 173 VKVGTPAAIMTFGSYAEFTMVPS-------------------------------KHILPV 201
           +K G   A+                                              H LP 
Sbjct: 79  LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPD 138

Query: 202 ARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAA 238
                ++V           A E A   +   + V  +
Sbjct: 139 NCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 41.9 bits (97), Expect = 4e-05
 Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 39/199 (19%)

Query: 89  KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
             V      +F    +K+R P     + + VLVK++  G+  +D+     +Y        
Sbjct: 6   AAVTPCKGADFELQALKIRQP-----QGDEVLVKVVATGMCHTDLIVRDQKYPV------ 54

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMT------------------------- 183
             LP   G E  G+I A+G +V  ++VG    +                           
Sbjct: 55  -PLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNF 113

Query: 184 --FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGG 241
               S     +      +       +      +    +  ++        +++   A   
Sbjct: 114 SGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDE 173

Query: 242 TGQFAVQLAKLAGNTVVAT 260
             Q A+   K      +  
Sbjct: 174 INQAAIDSRKGITLKPIIK 192

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 41.3 bits (95), Expect = 5e-05
 Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 9/145 (6%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG----- 167
            + PN V+VK + + VN SD+N   G Y S           +                  
Sbjct: 30  NLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGS 89

Query: 168 -DSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIAL--EQ 224
             S          + + FG++    +      + +  P         +GLT + ++    
Sbjct: 90  NVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTDAKSIETLY 149

Query: 225 AGPASGKKVLVTAAA-GGTGQFAVQ 248
            G     ++     A    G+  + 
Sbjct: 150 DGTKPLHELYQDGVANSKDGKQLIT 174

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 6/129 (4%)

Query: 205 DPEVVAMLTSGLTASI--ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG 262
           + E V ++  G ++    A+  A    G    V    G  G  A+   K+AG + +    
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAID 60

Query: 263 GEH-KAQLLKELGVDRVINYKAED--IKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAV 319
               K    K LG    +N +  D  ++ V  E    G D   +  G            V
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 320 YGRLIVIGM 328
            G      +
Sbjct: 121 LGWGSCTVV 129

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 29/158 (18%), Positives = 48/158 (30%), Gaps = 32/158 (20%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
              PN VL+++   G+  SDV++     +    +   + P   G EA G +  VG SV +
Sbjct: 28  EPGPNEVLLRMHSVGICGSDVHY---WEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84

Query: 173 VKVGTPAAI-----------------------------MTFGSYAEFTMVPSKHILPVAR 203
           +K G   AI                                G+   F    +     +  
Sbjct: 85  LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPD 144

Query: 204 PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGG 241
               +V        A  A E      G K+++      
Sbjct: 145 NVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDPSD 182

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 8/130 (6%)

Query: 206 PEVVAMLT-SGLTA-SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNT-VVATCG 262
           PE V ++     T    A++      G   +V    GG G   +   K AG + ++    
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV-FGLGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 263 GEHKAQLLKELGVDRVINYKAED--IKTVFKEEFPKGFDIIYESVGGD--MFNLCLKALA 318
            + K +    +G    I+ K     I  V  E         +E +G    M +       
Sbjct: 63  NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122

Query: 319 VYGRLIVIGM 328
            YG  +V+G+
Sbjct: 123 NYGTSVVVGV 132

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 17/127 (13%), Positives = 31/127 (24%), Gaps = 8/127 (6%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
               N + V+    G+N  D    SG Y       G           VG           
Sbjct: 24  DPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSG----VKHIK 79

Query: 173 VKVGTPAAIMTFGSYAEFTMVPSKHILPVARPDP----EVVAMLTSGLTASIALEQAGPA 228
                  A    G+Y+    + +     +         E           +  + ++   
Sbjct: 80  AGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRAT 139

Query: 229 SGKKVLV 235
            G  +L+
Sbjct: 140 QGSSLLI 146

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 8e-04
 Identities = 24/109 (22%), Positives = 36/109 (33%), Gaps = 20/109 (18%)

Query: 103 TIKVRA--------PLRL------PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIG 148
            IK +A        PL +      P K + V +KII   V  +D    SG          
Sbjct: 4   VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF--- 60

Query: 149 SRLPFDAGFEAVGLIAAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKH 197
              P   G    G++ +VG+ V  +K G     +      E     +  
Sbjct: 61  ---PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPK 106

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 37.2 bits (85), Expect = 8e-04
 Identities = 17/114 (14%), Positives = 31/114 (27%), Gaps = 2/114 (1%)

Query: 113 PIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGDSVNN 172
            +    V V + ++ +N  D    +G+     N         AG                
Sbjct: 24  RLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEV 83

Query: 173 VKVGTPAAIMTFGSYAEFTMVPSKHI--LPVARPDPEVVAMLTSGLTASIALEQ 224
           +  G       +G  AE   V    +  +P  +   E+          +I   Q
Sbjct: 84  LLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIINNQ 137

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 13/97 (13%)

Query: 227 PASGKKVLVTAAAGGTGQ-FAVQLAKLAGNTVVATCGGEHK-----AQLLKELGVDRVIN 280
           P +GK  L T A  G G+  A++L +  G +VV   G   K        LK+LG   V  
Sbjct: 3   PLAGKVALTTGAGRGIGRGIAIELGR-RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

Query: 281 Y----KAEDIKTVFKE--EFPKGFDIIYESVGGDMFN 311
                K  ++  +F +      G D +  + G +++ 
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWC 98

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 229 SGKKVLVTAAAGGTGQ-FAVQLAKL-AGNTVVATCGGEHKAQLLKELGVDRVINYKA 283
           S   V+VT A  G G     QL K      ++AT     KA  LK +   RV     
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL 58

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.003
 Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 229 SGKKV-LVTAAAGGTGQ-FAVQLAKLAGNTVVATCGGEHKAQLLKE 272
           SG  V LVT    G G      L +L    VV T     + Q   +
Sbjct: 1   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQ 46

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 11/127 (8%)

Query: 229 SGKKVLVTAAAGGTGQ-FAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK 287
             K VLV AA+ G G+  A  L++  G  V          +LLK  G   V+    +D+ 
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQ-EGAEVTICA---RNEELLKRSGHRYVVCDLRKDLD 58

Query: 288 TVFKEEFPKGFDII----YESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNY 343
            +F++   K  DI+         G    L  +        + + MI   +          
Sbjct: 59  LLFEKV--KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG 116

Query: 344 PGLCEKI 350
            G    I
Sbjct: 117 WGRIVAI 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	362
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.93
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.92
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.92
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.92
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.92
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.91
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.91
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.91
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.91
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.9
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.89
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.89
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.89
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.88
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.88
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.88
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.88
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.88
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.87
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.87
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.86
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.86
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.86
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.86
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.86
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.85
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.85
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.84
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.84
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.83
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.83
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.83
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.83
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.82
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.67
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.52
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.5
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.59
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.51
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.5
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.46
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.44
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.44
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.42
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.41
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.4
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.39
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.37
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.35
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.35
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.34
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.33
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.32
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.32
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.3
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.3
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.29
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.29
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.27
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.27
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.25
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.23
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.22
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.22
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.2
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.19
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.18
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.18
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.18
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.16
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.15
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.14
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.14
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.13
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.13
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.12
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.12
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.1
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.09
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.04
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.02
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.02
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.01
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.99
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.99
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.97
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.82
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.74
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.73
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.72
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.7
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.69
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.67
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.65
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.65
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.63
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.63
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.57
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.52
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.3
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.27
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.24
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.17
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.16
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.15
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.04
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.9
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.85
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.84
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.7
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.69
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.65
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.6
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.59
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.58
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.57
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.55
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.54
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.53
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.5
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.44
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.43
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.36
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.36
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.35
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.31
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.3
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.3
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.25
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.25
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.2
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.19
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.16
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.09
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.06
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.03
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.01
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.99
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.92
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.91
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.86
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	95.84
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.81
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.8
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.74
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.64
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.61
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.58
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.47
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.45
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.44
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.42
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.36
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.33
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.32
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.31
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.31
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.31
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.27
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.26
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.21
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.19
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.09
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.07
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.06
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.04
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	94.98
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.97
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.9
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	94.76
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.72
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.71
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.65
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.65
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.56
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.55
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.34
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.22
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.21
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	94.19
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.18
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	94.17
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.17
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.16
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.12
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.12
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.08
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.05
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	93.96
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.94
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.93
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.71
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.7
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.66
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	93.64
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.62
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.5
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.35
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.29
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.19
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.16
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	93.14
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.06
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	92.98
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	92.92
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.73
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.67
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	92.66
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.6
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.52
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.27
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	92.13
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	92.09
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.04
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	91.94
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.92
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	91.82
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	91.81
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.79
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.6
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.24
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.22
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.16
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	91.13
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.01
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	90.97
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	90.93
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	90.92
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	90.86
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	90.68
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	90.51
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.39
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.39
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	90.33
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	90.06
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.05
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	90.02
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.01
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.99
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	89.8
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.69
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	89.6
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	89.4
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	89.37
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	89.35
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	89.3
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	89.09
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.05
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	88.84
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	88.79
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.35
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.32
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	88.21
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.21
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	88.09
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.05
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	88.0
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	87.98
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	87.51
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	87.46
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	87.35
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.28
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.25
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.17
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	87.14
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	87.13
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	87.13
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	86.94
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.88
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	86.81
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.62
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	86.59
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	86.48
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	86.45
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	86.41
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	86.21
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	86.12
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	86.01
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	86.01
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	85.93
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	85.79
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.26
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	85.13
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	84.96
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	84.81
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	84.67
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	84.58
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	84.5
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	84.46
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.43
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	84.36
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	83.89
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.89
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.81
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.64
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	83.25
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.15
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	82.92
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.75
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	82.16
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	82.03
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	81.64
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.32
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.22
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	81.03
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.02
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	80.8
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	80.6
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	80.55
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.21
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	80.17
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	80.07
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	80.04

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=5.7e-27  Score=197.55  Aligned_cols=147  Identities=23%  Similarity=0.334  Sum_probs=124.3

Q ss_pred             CCHHHHHhhhhHHHHHHHHH---HhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE
Q 018013          204 PDPEVVAMLTSGLTASIALE---QAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI  279 (362)
Q Consensus       204 ~~~~~a~l~~~~~tA~~al~---~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~  279 (362)
                      ++.++|+++++++|||++++   +.+. ++|++|||+||+|++|.+++|+|+..|++|++++++++|.+.++++|+++++
T Consensus         2 S~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi   81 (176)
T d1xa0a2           2 TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL   81 (176)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE
T ss_pred             CHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee
Confidence            35789999999999997755   4566 8899999999999999999999999999999999999999999999999999


Q ss_pred             eCCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEE
Q 018013          280 NYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVC  359 (362)
Q Consensus       280 ~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G  359 (362)
                      |+++. +.+..+.+.++++|+|||++|++.++.++++|+++||++.+|..++.....++         ..++.|+++|.|
T Consensus        82 ~~~~~-~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~---------~~~~~k~~~i~G  151 (176)
T d1xa0a2          82 AREDV-MAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTV---------HPFILRGVSLLG  151 (176)
T ss_dssp             ECC----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCS---------HHHHHTTCEEEE
T ss_pred             ecchh-HHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCH---------HHHHHCCcEEEE
Confidence            98653 45555666788999999999999999999999999999999998876654322         258899999999


Q ss_pred             e
Q 018013          360 I  360 (362)
Q Consensus       360 ~  360 (362)
                      +
T Consensus       152 v  152 (176)
T d1xa0a2         152 I  152 (176)
T ss_dssp             C
T ss_pred             E
Confidence            6

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.5e-26  Score=195.68  Aligned_cols=144  Identities=28%  Similarity=0.362  Sum_probs=124.3

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      ++|.+|||++++.++.+    +++++++.| .++++||+|||.++|||++|++.+.|.++.     ...+|+++|||++|
T Consensus         1 ~~P~tMkA~v~~~~g~p----l~l~evp~P-~~~~~evlVkv~a~gic~~D~~~~~G~~~~-----~~~~P~i~GhE~~G   70 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP----LRIEEVKVP-LPGPGQVLVKIEASGVCHTDLHAAEGDWPV-----KPPLPFIPGHEGVG   70 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC----CEEEEEECC-CCCTTCEEEEEEEEECCHHHHHHHHTCSSS-----CCCSSBCCCSCEEE
T ss_pred             CcchhcEEEEEEeCCCC----CEEEEeECC-CCCCCEEEEEEEEecCcccchhhhccCccc-----cccCCcCCCCcceE
Confidence            47899999999987654    789999999 899999999999999999999999998753     35679999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHH
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVA  210 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~  210 (362)
                      +|+++|++|++|++||||+...                             +|+|+||++++++.++++|++  +..+++
T Consensus        71 ~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~  150 (175)
T d1llua1          71 YVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPG  150 (175)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEE
T ss_pred             EEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHH
Confidence            9999999999999999998631                             378999999999999999985  344566


Q ss_pred             hhhhHHHHHHHHHHhCCCCCCEEEEE
Q 018013          211 MLTSGLTASIALEQAGPASGKKVLVT  236 (362)
Q Consensus       211 l~~~~~tA~~al~~~~~~~g~~VlI~  236 (362)
                      +..++.|++++++ .+..+|++|||.
T Consensus       151 ~~~~~~t~~~~~~-~g~~~G~~VLVl  175 (175)
T d1llua1         151 KLDDINQILDQMR-AGQIEGRIVLEM  175 (175)
T ss_dssp             CGGGHHHHHHHHH-TTCCSSEEEEEC
T ss_pred             HHhHHHHHHHHHH-hCCCCCCEEEeC
Confidence            7788888888875 344679999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=4.4e-27  Score=199.50  Aligned_cols=143  Identities=20%  Similarity=0.249  Sum_probs=121.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |+|+ ++.++     .+++++++.| +++++||+||+.++|||++|++++.+......   ..+.|+++|||++|+|+++
T Consensus         3 maAV-l~g~~-----~l~~~e~~~P-~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~---~~~~p~i~GhE~~G~Vv~v   72 (178)
T d1e3ja1           3 LSAV-LYKQN-----DLRLEQRPIP-EPKEDEVLLQMAYVGICGSDVHYYEHGRIADF---IVKDPMVIGHEASGTVVKV   72 (178)
T ss_dssp             EEEE-EEETT-----EEEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSBSSSC---BCCSCEECCCEEEEEEEEE
T ss_pred             eEEE-EEcCC-----cEEEEEeECC-CCCCCEEEEEEEEEcccCchhhhhccCccccc---cccCCeeeccccceEEEec
Confidence            4555 55544     3899999999 89999999999999999999998887654322   4567889999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhH
Q 018013          167 GDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSG  215 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~  215 (362)
                      |++|++|++||||+...                             +|+|+||+++|++.++++|++  +.++++++.++
T Consensus        73 G~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~  152 (178)
T d1e3ja1          73 GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKL  152 (178)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEG
T ss_pred             CcccCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHH
Confidence            99999999999998642                             389999999999999999985  56677778899


Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCC
Q 018013          216 LTASIALEQAGPASGKKVLVTAAA  239 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~  239 (362)
                      .|||++++....++|++|+|+||+
T Consensus       153 ~ta~~a~~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         153 EQTVDAFEAARKKADNTIKVMISC  176 (178)
T ss_dssp             GGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             HHHHHHHHHhCCCCCCEEEEEccc
Confidence            999999987666999999999975

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.6e-26  Score=189.03  Aligned_cols=143  Identities=22%  Similarity=0.312  Sum_probs=125.7

Q ss_pred             cceEEEEeccCCCccCceEEE-eccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKV-RAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~-~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .|||++++..+.+  +.++++ +.+.| .+++|||+|||.++|||++|++.+.|.++.     ...+|.++|||++|+|+
T Consensus         2 ~MkAv~~~~~G~p--~~l~~~~~~~~P-~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-----~~~~p~i~G~e~~G~V~   73 (150)
T d1yb5a1           2 LMRAVRVFEFGGP--EVLKLRSDIAVP-IPKDHQVLIKVHACGVNPVETYIRSGTYSR-----KPLLPYTPGSDVAGVIE   73 (150)
T ss_dssp             EEEEEEESSCSSG--GGEEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSC-----CCCSSBCCCSCEEEEEE
T ss_pred             ceeEEEEEccCCc--ceEEEEeecCCC-CCCCCeEEEEEEEecCcccchhhhcCCcCc-----cccccccCccceeeeeE
Confidence            5999999987744  457764 57888 789999999999999999999999998753     34678899999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEE
Q 018013          165 AVGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVT  236 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~  236 (362)
                      ++|+++++|++||||++..  +|+|+||+++|++.++++|++  +.++++++...+|||+++...+. +.|+++||.
T Consensus        74 ~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          74 AVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             EECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eecceeeccccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999998874  589999999999999999985  66778889999999999988888 999999873

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.94  E-value=5.1e-26  Score=193.64  Aligned_cols=150  Identities=32%  Similarity=0.502  Sum_probs=131.5

Q ss_pred             HHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHH
Q 018013          209 VAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK  287 (362)
Q Consensus       209 a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~  287 (362)
                      +++.++++|||++|.+..+ ++|++|||+||+|++|++++|+|+..|++||+++++++|.++++++|++++++++++++.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~   87 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSL   87 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCH
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHH
Confidence            5677899999999999988 999999999999999999999999999999999999999999999999999999887765


Q ss_pred             HH-HHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          288 TV-FKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       288 ~~-~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +. .+.+.++|+|+||||+|++.++.++++++++|+++.+|..+.+....+..+   ......++.|++|+.||+
T Consensus        88 ~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~---~~~~~~l~~k~~ti~g~~  159 (182)
T d1v3va2          88 EEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPP---GPSPESIIYKQLRIEGFI  159 (182)
T ss_dssp             HHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCB---CCCHHHHHHTTCEEEECC
T ss_pred             HHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCC---CcchHHHhhcCcEEEEEE
Confidence            54 455678899999999999999999999999999999999887665433222   223457899999999974

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.6e-26  Score=191.50  Aligned_cols=146  Identities=27%  Similarity=0.320  Sum_probs=129.9

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA  283 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~  283 (362)
                      ++++|+++++++|||++|.+..+ ++|++|||+|++|++|++++|+|+.+|++|++++++++|.+.++++|+++++|+++
T Consensus         3 ~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~   82 (174)
T d1yb5a2           3 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHRE   82 (174)
T ss_dssp             HHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccccc
Confidence            56788999999999999988877 99999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHH-CCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          284 EDIKTVFKEE-FPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       284 ~~~~~~~~~~-~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      .++.+.+++. .++++|++|||+|++.++.++++++++|+++.+|..+..+    +.       ...++.|++++.|++
T Consensus        83 ~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~----~~-------~~~~~~k~~~i~g~~  150 (174)
T d1yb5a2          83 VNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIE----IN-------PRDTMAKESSIIGVT  150 (174)
T ss_dssp             TTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSCEE----EC-------THHHHTTTCEEEECC
T ss_pred             ccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCCCC----CC-------HHHHHHCCCEEEEEE
Confidence            9988877654 5678999999999999999999999999999999754321    11       125789999999974

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=1.1e-25  Score=193.97  Aligned_cols=144  Identities=16%  Similarity=0.180  Sum_probs=127.1

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      .-+.++||++++..+.+    +++++++.| +|+++||+|||.++|||++|++.+.|..+      ...+|.++|||++|
T Consensus         4 ~~~~~~kAav~~~~~~p----l~i~ev~~P-~p~~~eVlIkv~a~giCgsD~~~~~g~~~------~~~~p~i~GhE~~G   72 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKP----LVIEEIEVD-VPHANEIRIKIIATGVCHTDLYHLFEGKH------KDGFPVVLGHEGAG   72 (199)
T ss_dssp             TSCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTTCC------TTSCSEECCCCEEE
T ss_pred             CCceEEEEEEEecCCCC----cEEEEEECC-CCCCCEEEEEEEEEEEecchhhhhhhccc------ccccccccccccce
Confidence            34556779999877654    899999999 89999999999999999999999998654      35678999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEE
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTM  192 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~  192 (362)
                      +|+++|+++++|++||||++..                                                 .|+|+||++
T Consensus        73 ~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~  152 (199)
T d1cdoa1          73 IVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTV  152 (199)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEE
T ss_pred             EEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEE
Confidence            9999999999999999998742                                                 289999999


Q ss_pred             eeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEE
Q 018013          193 VPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVT  236 (362)
Q Consensus       193 v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~  236 (362)
                      ++++.++++|++  +.+++++..++.|++.++...+. +.|++|||.
T Consensus       153 v~~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         153 VNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EEGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             EchHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999995  56778889999999999999888 899999984

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=3.2e-25  Score=189.40  Aligned_cols=153  Identities=31%  Similarity=0.537  Sum_probs=124.6

Q ss_pred             HHhhhhHHHHHHHHHHhCC-CCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHH-HHcCCcEEEeCCC
Q 018013          209 VAMLTSGLTASIALEQAGP-ASG--KKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLL-KELGVDRVINYKA  283 (362)
Q Consensus       209 a~l~~~~~tA~~al~~~~~-~~g--~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l-~~~g~~~v~~~~~  283 (362)
                      .+++++++|||++|.+... ++|  ++|||+||+|++|++++|+||..|+ +|+++++++++...+ +++|+++++|+++
T Consensus         7 galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~   86 (187)
T d1vj1a2           7 GAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT   86 (187)
T ss_dssp             TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTS
T ss_pred             HHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccc
Confidence            3677889999999999887 777  8999999999999999999999999 566667777666655 5799999999999


Q ss_pred             ccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          284 EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       284 ~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++.+.+++.+++|+|+|||++|++.++.++++++++|+++.+|..+++....+..+...+.....+..|+++++||.
T Consensus        87 ~~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~~g~~  164 (187)
T d1vj1a2          87 GNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFT  164 (187)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEEEECC
T ss_pred             hhHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEEEEeE
Confidence            999999999988999999999999999999999999999999999998877666666665666677889999999973

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=3.2e-25  Score=188.70  Aligned_cols=146  Identities=29%  Similarity=0.425  Sum_probs=128.8

Q ss_pred             HHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc
Q 018013          206 PEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       206 ~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~  284 (362)
                      +++|+++++++|||++|.+... ++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++++|++++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSV   80 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCS
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCcc
Confidence            3789999999999999998887 999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          285 DIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       285 ~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      ++.+.+++.+ ++|+|++|||+|++.++.++++|+++|++|.+|..+.......    ..     ..+.|++++.++
T Consensus        81 ~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~----~~-----~~~~~~~~~~~~  148 (183)
T d1pqwa_          81 DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASL----GL-----AALAKSASFSVV  148 (183)
T ss_dssp             THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEE----EG-----GGGTTTCEEEEC
T ss_pred             CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCccc----ch-----HHHhCCcEEEEE
Confidence            9988777765 5799999999999999999999999999999998876554210    10     244678888776

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=5.4e-25  Score=180.58  Aligned_cols=138  Identities=19%  Similarity=0.265  Sum_probs=117.9

Q ss_pred             EEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeCC
Q 018013           89 KLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVGD  168 (362)
Q Consensus        89 a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~  168 (362)
                      .+.++.++.+  +.+++++.+.| .++++||+|||.+++||++|++++.|.++      ...+|.++|+|++|+|+++|+
T Consensus         3 ~i~~~~~G~p--e~l~~~e~~~P-~p~~~eVlVkv~a~~in~~D~~~~~G~~~------~~~~p~~~G~e~~G~V~~vG~   73 (147)
T d1qora1           3 RIEFHKHGGP--EVLQAVEFTPA-DPAENEIQVENKAIGINFIDTYIRSGLYP------PPSLPSGLGTEAAGIVSKVGS   73 (147)
T ss_dssp             EEEBSSCCSG--GGCEEEECCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSC------CSSSSBCCCSCEEEEEEEECT
T ss_pred             EEEEcccCCC--ceeEEEEecCC-CCCCCEEEEEEEEecccceeeeeecCCCC------CCcceeeeccccccceeeeee
Confidence            4556666643  57999999999 88999999999999999999999999875      356889999999999999999


Q ss_pred             CCCCCCCCCeEEEe--cCCCeeeEEEeeCCCeeeCCCC--CH--HHHHhhhhHHHHHHHHHHhCCCCCCEEEE
Q 018013          169 SVNNVKVGTPAAIM--TFGSYAEFTMVPSKHILPVARP--DP--EVVAMLTSGLTASIALEQAGPASGKKVLV  235 (362)
Q Consensus       169 ~v~~~~~Gd~V~~~--~~g~~~~~~~v~~~~~~~ip~~--~~--~~a~l~~~~~tA~~al~~~~~~~g~~VlI  235 (362)
                      +|++|++||||+..  ..|+|+||++++.+.++++|++  +.  ++++++....++++++.+...++|++|||
T Consensus        74 ~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G~~VLI  146 (147)
T d1qora1          74 GVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI  146 (147)
T ss_dssp             TCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEE
T ss_pred             ecccccccceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEe
Confidence            99999999999754  4689999999999999999984  33  34456778888999887755599999998

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=3.6e-25  Score=186.34  Aligned_cols=143  Identities=31%  Similarity=0.351  Sum_probs=116.8

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc
Q 018013          205 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~  284 (362)
                      ++++|+++++++|||++|++...++|++|||+|++|++|++++|+|+..|++|++++++++|.+.++++|+++++|+.+.
T Consensus         3 ~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~   82 (171)
T d1iz0a2           3 PEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEV   82 (171)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeehhhh
Confidence            56788899999999999987544999999999999999999999999999999999999999999999999999988642


Q ss_pred             cHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          285 DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       285 ~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                        ..  +.+.++|+|+||||+| +.++.++++++++|+++.+|..++.....+.         ..++.|+++|.|++
T Consensus        83 --~~--~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~---------~~~~~k~~~i~g~~  145 (171)
T d1iz0a2          83 --PE--RAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPP---------LRLMRRNLAVLGFW  145 (171)
T ss_dssp             --HH--HHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCT---------THHHHTTCEEEECC
T ss_pred             --hh--hhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccH---------HHHHHCCcEEEEEe
Confidence              22  2234678999999988 5688999999999999999987754433221         14889999999985

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.92  E-value=1.8e-25  Score=188.06  Aligned_cols=140  Identities=22%  Similarity=0.304  Sum_probs=119.9

Q ss_pred             eEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEeC
Q 018013           88 EKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAVG  167 (362)
Q Consensus        88 ~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~vG  167 (362)
                      ||++++..+.+    +++++++.|+.++++||+|||.++|||++|++.+.|.++...   ...+|+++|||++|+|+++|
T Consensus         1 kA~~~~~~g~p----l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~---~~~~P~v~GhE~~G~V~~vG   73 (171)
T d1h2ba1           1 KAARLHEYNKP----LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELL---QPKLPYTLGHENVGYIEEVA   73 (171)
T ss_dssp             CEEEESSTTSC----CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHH---CCCSSEECCCCEEEEEEEEC
T ss_pred             CEEEEEeCCCC----CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCccccc---CCccccccceeeeeeeeccc
Confidence            68889887754    889999999445789999999999999999999998765322   34678999999999999999


Q ss_pred             CCCCCCCCCCeEEEec----------------------------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHH
Q 018013          168 DSVNNVKVGTPAAIMT----------------------------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLT  217 (362)
Q Consensus       168 ~~v~~~~~Gd~V~~~~----------------------------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~t  217 (362)
                      ++|++|++||||++..                            .|+|+||+++|++.++++|++  ++.+++++.++.|
T Consensus        74 ~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~t  153 (171)
T d1h2ba1          74 EGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEIND  153 (171)
T ss_dssp             TTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHH
T ss_pred             CCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHH
Confidence            9999999999998742                            389999999999999999985  4446678899999


Q ss_pred             HHHHHHHhCCCCCCEEEE
Q 018013          218 ASIALEQAGPASGKKVLV  235 (362)
Q Consensus       218 A~~al~~~~~~~g~~VlI  235 (362)
                      ||++++.... .|++|||
T Consensus       154 a~~al~~~~~-~G~~VlI  170 (171)
T d1h2ba1         154 VLERLEKGEV-LGRAVLI  170 (171)
T ss_dssp             HHHHHHTTCC-SSEEEEE
T ss_pred             HHHHHHhcCC-CCCEEEe
Confidence            9999976544 8999998

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=5.7e-25  Score=187.99  Aligned_cols=148  Identities=20%  Similarity=0.330  Sum_probs=121.9

Q ss_pred             cCCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceE
Q 018013           81 VQLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAV  160 (362)
Q Consensus        81 ~~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~  160 (362)
                      +++|.+||++.++.+...  ..+.+.+.+.+ +++++||+||+.++|||++|++++.|.++      ..++|+++|||++
T Consensus         1 m~~P~~~ka~~~~~~~~~--~~~~~~~~~p~-p~~~~eVlVkv~a~giC~sDl~~~~g~~~------~~~~P~i~GHE~~   71 (192)
T d1piwa1           1 MSYPEKFEGIAIQSHEDW--KNPKKTKYDPK-PFYDHDIDIKIEACGVCGSDIHCAAGHWG------NMKMPLVVGHEIV   71 (192)
T ss_dssp             CCTTTCEEEEEECCSSST--TSCEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHHTTTTS------CCCSSEECCCCEE
T ss_pred             CCCCceeEEEEEeCCCcC--CcceEeeccCC-CCCCCeEEEEEeeeCCCcchHHHHcCCCC------CCCCCcCcccccc
Confidence            367999999999887743  23556666544 78999999999999999999999998764      3568999999999


Q ss_pred             EEEEEeCCCC-CCCCCCCeEEEec------------------------------------CCCeeeEEEeeCCCeeeCCC
Q 018013          161 GLIAAVGDSV-NNVKVGTPAAIMT------------------------------------FGSYAEFTMVPSKHILPVAR  203 (362)
Q Consensus       161 G~V~~vG~~v-~~~~~Gd~V~~~~------------------------------------~g~~~~~~~v~~~~~~~ip~  203 (362)
                      |+|+++|+++ +.+++||||....                                    +|+|+||+++|++.++++|+
T Consensus        72 G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~  151 (192)
T d1piwa1          72 GKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPE  151 (192)
T ss_dssp             EEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCT
T ss_pred             cchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCC
Confidence            9999999998 6699999996321                                    38999999999999999998


Q ss_pred             C-CHHHHHhhhh-HHHHHHHHHHhCCCCCCEEEEEc
Q 018013          204 P-DPEVVAMLTS-GLTASIALEQAGPASGKKVLVTA  237 (362)
Q Consensus       204 ~-~~~~a~l~~~-~~tA~~al~~~~~~~g~~VlI~g  237 (362)
                      + +.+.|++..+ +.|||+++.+...++|++|+|..
T Consensus       152 ~l~~e~Aal~~~~~~ta~~~l~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         152 NIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  187 (192)
T ss_dssp             TCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence            6 4455666665 66899999876559999999863

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=7e-25  Score=184.60  Aligned_cols=139  Identities=24%  Similarity=0.317  Sum_probs=116.4

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+.+    +++++++.| +++++||+|||.++|||++|++++.+.+..     ...+|+++|||++|+|+++
T Consensus         1 MkA~v~~~~g~p----l~i~~v~~P-~~~~~eVlVkv~a~gic~sD~~~~~~~~~~-----~~~~p~v~GhE~~G~Vv~v   70 (171)
T d1rjwa1           1 MKAAVVEQFKEP----LKIKEVEKP-TISYGEVLVRIKACGVCHTDLHAAHGDWPV-----KPKLPLIPGHEGVGIVEEV   70 (171)
T ss_dssp             CEEEEBSSTTSC----CEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSS-----CCCSSBCCCSCEEEEEEEE
T ss_pred             CeEEEEecCCCC----cEEEEeECC-CCCCCeEEEEEEEeeccccceeeeeccccc-----ccccccccCCEEEEEEEEe
Confidence            899999987643    889999999 899999999999999999999988876432     4567889999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHH
Q 018013          167 GDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGL  216 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~  216 (362)
                      |++++++++||||+...                             +|+|+||+++|+++++++|++ +.++|++ ....
T Consensus        71 G~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~l-~~~~  149 (171)
T d1rjwa1          71 GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPL-EKIN  149 (171)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEEG-GGHH
T ss_pred             cccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHHH-HHHH
Confidence            99999999999997532                             389999999999999999986 3445554 4566


Q ss_pred             HHHHHHHHhCCCCCCEEEEEc
Q 018013          217 TASIALEQAGPASGKKVLVTA  237 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~g  237 (362)
                      ++++++.+. .-+|++|||+|
T Consensus       150 ~~~~~~~~~-~~~G~tVlViG  169 (171)
T d1rjwa1         150 EVFDRMLKG-QINGRVVLTLE  169 (171)
T ss_dssp             HHHHHHHTT-CCSSEEEEECC
T ss_pred             HHHHHHHhc-CCCCCEEEEeC
Confidence            777777543 33599999998

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=3.7e-25  Score=190.21  Aligned_cols=141  Identities=21%  Similarity=0.201  Sum_probs=125.6

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .+|||++++.++.+    ++++++|.| +|+++||+|||.++|||++|++++.|.++      ...+|+++|||++|+|+
T Consensus         5 ~~~kAav~~~~g~~----l~i~evp~P-~p~~~eVLVkv~a~gic~sD~~~~~G~~~------~~~~p~v~GhE~~G~V~   73 (197)
T d2fzwa1           5 IKCKAAVAWEAGKP----LSIEEIEVA-PPKAHEVRIKIIATAVCHTDAYTLSGADP------EGCFPVILGHLGAGIVE   73 (197)
T ss_dssp             EEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTCCT------TCCSSBCCCCEEEEEEE
T ss_pred             eEEEEEEEccCCCC----CEEEEEECC-CCCCCEEEEEEEEecCCCCcHHHHcCCcc------cccccccCCcceeeEEE
Confidence            46999999988765    899999999 99999999999999999999999999764      35689999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEeeC
Q 018013          165 AVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMVPS  195 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v~~  195 (362)
                      ++|++|+++++||+|++..                                                 .|+|+||+++|+
T Consensus        74 ~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~  153 (197)
T d2fzwa1          74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVAD  153 (197)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             eecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEech
Confidence            9999999999999998642                                                 179999999999


Q ss_pred             CCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEE
Q 018013          196 KHILPVARP--DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVT  236 (362)
Q Consensus       196 ~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~  236 (362)
                      ..++++|++  ++++++++.++.+++.++..+.. +.+++|+|+
T Consensus       154 ~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         154 ISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             GGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             HHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999985  56777788899999999987776 889999985

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=7.7e-25  Score=180.65  Aligned_cols=143  Identities=18%  Similarity=0.308  Sum_probs=124.1

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      ++|||++++..+.++  .+++++.+.| ++++|||+|||+++|||++|++.+.|.++.     ....|+++|+|++|+|+
T Consensus         2 ~~~KA~v~~~~~~~~--~~~i~~v~~P-~~~~~eVlVkV~a~gin~~D~~~~~g~~~~-----~~~~p~v~g~e~~G~v~   73 (152)
T d1xa0a1           2 SAFQAFVVNKTETEF--TAGVQTISMD-DLPEGDVLVRVHYSSVNYKDGLASIPDGKI-----VKTYPFVPGIDLAGVVV   73 (152)
T ss_dssp             CEEEEEEEEEETTEE--EEEEEEEEGG-GSCSCSEEEEEEEEECCHHHHHHTSGGGSS-----CCSSSBCCCSEEEEEEE
T ss_pred             CceEEEEEEecCCce--EEEEEEccCC-CCCCCEEEEEEEEeCCChHHHHHHhhcccc-----cccccceeeeeeeeeee
Confidence            479999999888654  3678899999 899999999999999999999999887653     35678999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec-------CCCeeeEEEeeCCCeeeCCCC-CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEE
Q 018013          165 AVGDSVNNVKVGTPAAIMT-------FGSYAEFTMVPSKHILPVARP-DPEVVAMLTSGLTASIALEQAGPASGKKVLVT  236 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~-------~g~~~~~~~v~~~~~~~ip~~-~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~  236 (362)
                      +  .+++.|++||+|+...       +|+|+||+++|++.++++|++ +.++|+++++++|||.++......+|++|||.
T Consensus        74 ~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~~aa~l~~a~~ta~~~~~~~~~~~G~tVL~l  151 (152)
T d1xa0a1          74 S--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRTVVRL  151 (152)
T ss_dssp             E--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHHHHEEEEEGGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             c--cCCCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEc
Confidence            8  5567899999998764       589999999999999999997 45667888899999999988888559999997


Q ss_pred             c
Q 018013          237 A  237 (362)
Q Consensus       237 g  237 (362)
                      |
T Consensus       152 ~  152 (152)
T d1xa0a1         152 A  152 (152)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.5e-25  Score=186.00  Aligned_cols=143  Identities=24%  Similarity=0.252  Sum_probs=118.0

Q ss_pred             cceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEE
Q 018013           86 SFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAA  165 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~  165 (362)
                      .+.|++++.++.     +++++++.| +++++||+|||.++|||++|++++.+.....   ...++|+++|||++|+|++
T Consensus         7 ~~~a~V~~gp~~-----l~l~evp~P-~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~---~~~~~p~i~GhE~~G~V~~   77 (185)
T d1pl8a1           7 NNLSLVVHGPGD-----LRLENYPIP-EPGPNEVLLRMHSVGICGSDVHYWEYGRIGN---FIVKKPMVLGHEASGTVEK   77 (185)
T ss_dssp             CCEEEEEEETTE-----EEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSEETT---EECSSCEECCCEEEEEEEE
T ss_pred             CCEEEEEeCCCe-----EEEEEeECC-CCCCCEEEEEEEEEEeeCchhhhhccccccc---cCCCCCeeeeeeeeeeEEE
Confidence            577999997653     899999999 8899999999999999999999987643221   1356788999999999999


Q ss_pred             eCCCCCCCCCCCeEEEec-----------------------------CCCeeeEEEeeCCCeeeCCCCCHHHHHhhhhHH
Q 018013          166 VGDSVNNVKVGTPAAIMT-----------------------------FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGL  216 (362)
Q Consensus       166 vG~~v~~~~~Gd~V~~~~-----------------------------~g~~~~~~~v~~~~~~~ip~~~~~~a~l~~~~~  216 (362)
                      +|+++++|++||||++.+                             .|+|+||+++++++++++|++.....+...++.
T Consensus        78 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl~  157 (185)
T d1pl8a1          78 VGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLE  157 (185)
T ss_dssp             ECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEGG
T ss_pred             eccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHHH
Confidence            999999999999998642                             378999999999999999986433333344566


Q ss_pred             HHHHHHHHhCCCCCCEEEEEc
Q 018013          217 TASIALEQAGPASGKKVLVTA  237 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~g  237 (362)
                      +|+++++....++|++|+|..
T Consensus       158 ~a~~a~~~~~~~~G~~VlIg~  178 (185)
T d1pl8a1         158 KALEAFETFKKGLGLKIMLKC  178 (185)
T ss_dssp             GHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHhCCCCCCEEEEEe
Confidence            778888777779999999943

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.7e-24  Score=181.42  Aligned_cols=132  Identities=32%  Similarity=0.403  Sum_probs=122.9

Q ss_pred             CCHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          204 PDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       204 ~~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      +++++|+++++++|||++|.+..+ ++|++|+|+||+|++|++++|+|+..|++|++++++++|.+.++++|+++++|++
T Consensus         2 sfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~   81 (179)
T d1qora2           2 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYR   81 (179)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEECC
Confidence            367899999999999999998887 9999999999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHC-CCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          283 AEDIKTVFKEEF-PKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       283 ~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      ++++.+.+++.+ ++++|+++|++|++.+..++++++++|+++.+|..+.....
T Consensus        82 ~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  135 (179)
T d1qora2          82 EEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTG  135 (179)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCC
T ss_pred             CCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccc
Confidence            999988887765 67899999999999999999999999999999988876554

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.91  E-value=1e-24  Score=188.52  Aligned_cols=142  Identities=18%  Similarity=0.211  Sum_probs=121.0

Q ss_pred             CCCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEE
Q 018013           82 QLPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVG  161 (362)
Q Consensus        82 ~~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G  161 (362)
                      ..|.+|||++++.++.+    ++++++|.| +|+++||+|||.++|||++|++++.|.++       ..+|+++|||++|
T Consensus         4 ~~~~~~KAaV~~~~g~p----l~i~evp~P-~p~~geVlVkv~a~gic~sD~~~~~G~~~-------~~~P~v~GHE~~G   71 (202)
T d1e3ia1           4 GKVIKCKAAIAWKTGSP----LCIEEIEVS-PPKACEVRIQVIATCVCPTDINATDPKKK-------ALFPVVLGHECAG   71 (202)
T ss_dssp             TSCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHTTCTTSC-------CCSSBCCCCEEEE
T ss_pred             CCeEEEEEEEEccCCCC----CEEEEEECC-CCCCCEEEEEEEEEEEeccccceeeeecc-------cccccccccccce
Confidence            34678999999988754    899999999 88999999999999999999999998763       4578999999999


Q ss_pred             EEEEeCCCCCCCCCCCeEEEec-----------------------------------------------------CCCee
Q 018013          162 LIAAVGDSVNNVKVGTPAAIMT-----------------------------------------------------FGSYA  188 (362)
Q Consensus       162 ~V~~vG~~v~~~~~Gd~V~~~~-----------------------------------------------------~g~~~  188 (362)
                      +|+++|++|+++++||||++..                                                     .|+|+
T Consensus        72 ~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~fa  151 (202)
T d1e3ia1          72 IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFS  151 (202)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSB
T ss_pred             EEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCce
Confidence            9999999999999999998742                                                     17899


Q ss_pred             eEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEc
Q 018013          189 EFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTA  237 (362)
Q Consensus       189 ~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~g  237 (362)
                      ||+++|+..++++|++  ++.++++..++.+++.++...  ++|++|.|+.
T Consensus       152 ey~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~~--k~G~~V~vi~  200 (202)
T d1e3ia1         152 QYTVVSEANLARVDDEFDLDLLVTHALPFESINDAIDLM--KEGKSIRTIL  200 (202)
T ss_dssp             SEEEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHHHH--HTTCCSEEEE
T ss_pred             EEEEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHHhC--CCCCEEEEEE
Confidence            9999999999999986  334456667778888887654  6788888764

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.91  E-value=3.6e-24  Score=183.45  Aligned_cols=141  Identities=21%  Similarity=0.254  Sum_probs=118.7

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .+|+|+++...+.+    +++++++.| +++++||+||+.++|||++|++++.|.++       .++|+++|||++|+|+
T Consensus         2 k~~~Aav~~~~g~~----l~l~~v~~P-~p~~geVlVkv~a~gic~sD~~~~~G~~~-------~~~P~i~GHE~~G~V~   69 (194)
T d1f8fa1           2 KDIIAAVTPCKGAD----FELQALKIR-QPQGDEVLVKVVATGMCHTDLIVRDQKYP-------VPLPAVLGHEGSGIIE   69 (194)
T ss_dssp             EEEEEEEBCSTTCC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSSC-------CCSSBCCCCEEEEEEE
T ss_pred             ceeEEEEEcCCCCC----cEEEEeeCC-CCCCCEEEEEEEEEEecCchHhhhhhccc-------ccCCcccccceEEEee
Confidence            36889999887765    799999999 89999999999999999999999998763       4689999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec--------------------------------------------------CCCeeeEEEee
Q 018013          165 AVGDSVNNVKVGTPAAIMT--------------------------------------------------FGSYAEFTMVP  194 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~--------------------------------------------------~g~~~~~~~v~  194 (362)
                      ++|++|++|++||||+...                                                  .|+|+||.+++
T Consensus        70 ~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~  149 (194)
T d1f8fa1          70 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR  149 (194)
T ss_dssp             EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred             ecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEe
Confidence            9999999999999996521                                                  16789999999


Q ss_pred             CCCeeeCCCCCHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEe
Q 018013          195 SKHILPVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVAT  260 (362)
Q Consensus       195 ~~~~~~ip~~~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~  260 (362)
                      ...++++|++.+                      .++.+++.| +|++|++++|+++.+|++.++.
T Consensus       150 ~~~~~~ip~~i~----------------------~~~~~~i~g-~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         150 ENNTVKVTKDFP----------------------FDQLVKFYA-FDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             GGGEEEECTTCC----------------------GGGGEEEEE-GGGHHHHHHHHHHTSCSEEEEE
T ss_pred             hHHEEECCCCCC----------------------cccEEEEeC-cHHHHHHHHHHHHHcCCCEEEE
Confidence            999999997421                      123345555 8999999999999999965443

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=3.8e-24  Score=171.46  Aligned_cols=127  Identities=26%  Similarity=0.334  Sum_probs=112.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+.+    +++++.+.| .++++||+||++++|||++|+++..|.++.     ...+|+++|+|++|+|   
T Consensus         1 MkA~~~~~~G~~----l~~~e~~~p-~p~~~eVlVkv~a~gin~~D~~~~~G~~~~-----~~~~P~v~G~E~~G~V---   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP----LELVDLPEP-EAEEGEVVLRVEAVGLNFADHLMRLGAYLT-----RLHPPFIPGMEVVGVV---   67 (131)
T ss_dssp             CEEEEECSTTSC----EEEEECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSS-----CCCSSBCCCCEEEEEE---
T ss_pred             CcEEEEccCCCC----CEEEEccCC-CCCCCEEEEEEEEEeccccccccccccccc-----cccceeEeeeeeEEee---
Confidence            899999987754    889999999 899999999999999999999999998753     3468999999999999   


Q ss_pred             CCCCCCCCCCCeEEEec-CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEE
Q 018013          167 GDSVNNVKVGTPAAIMT-FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLV  235 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI  235 (362)
                              +||+|+++. +|+|+||++++++.++++|++  +.++|+++..+.|||++|.+.+ +.|++||+
T Consensus        68 --------vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g-~~g~tvl~  130 (131)
T d1iz0a1          68 --------EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG-HTGKVVVR  130 (131)
T ss_dssp             --------TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT-CCBEEEEE
T ss_pred             --------ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc-cCCCEEEE
Confidence                    399998875 589999999999999999994  6778888899999999997655 67999986

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3.5e-24  Score=180.71  Aligned_cols=145  Identities=22%  Similarity=0.289  Sum_probs=123.0

Q ss_pred             CHHHHHhhhhHHHHHHHHH---HhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEe
Q 018013          205 DPEVVAMLTSGLTASIALE---QAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN  280 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~---~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~  280 (362)
                      +.++++++++++|||++++   +.+. +++++|||+||+|++|.+++|+||.+|++|++++++++|.+.++++|+++++|
T Consensus         3 ~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi~   82 (177)
T d1o89a2           3 ARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLP   82 (177)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEEE
T ss_pred             HHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccccc
Confidence            4688999999999997764   4555 55679999999999999999999999999999999999999999999999999


Q ss_pred             CCCccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          281 YKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       281 ~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +++.+..+.   ......|.++|++|++.+..++++++++|+++.+|..++.....++         ..++.|+++|.|+
T Consensus        83 ~~~~~~~~~---l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~---------~~~~~k~~~i~G~  150 (177)
T d1o89a2          83 RDEFAESRP---LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTV---------MPFILRNVRLQGV  150 (177)
T ss_dssp             GGGSSSCCS---SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCS---------HHHHHHCCEEEEC
T ss_pred             cccHHHHHH---HHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccH---------HHHHHCCCeEEEE
Confidence            986554322   3345689999999999999999999999999999999876553221         2488999999997


Q ss_pred             c
Q 018013          361 H  361 (362)
Q Consensus       361 ~  361 (362)
                      +
T Consensus       151 ~  151 (177)
T d1o89a2         151 D  151 (177)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=4.2e-24  Score=182.74  Aligned_cols=149  Identities=20%  Similarity=0.224  Sum_probs=122.3

Q ss_pred             CCHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEE-cCCchHHHHHHHHHHHCCCEEEEecCCH----hHHHHHHHcCCcE
Q 018013          204 PDPEVVAMLTSGLTASIALEQAGP-ASGKKVLVT-AAAGGTGQFAVQLAKLAGNTVVATCGGE----HKAQLLKELGVDR  277 (362)
Q Consensus       204 ~~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~-ga~g~vG~~aiqla~~~G~~Vi~~~~~~----~~~~~l~~~g~~~  277 (362)
                      +++++|++++.++|||++|.+... ++|++|+|+ ||+|++|++++|+||++|++||+++++.    ++.+.++++|+++
T Consensus         2 s~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~   81 (189)
T d1gu7a2           2 TINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ   81 (189)
T ss_dssp             CHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred             CHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccE
Confidence            357899999999999999998887 999998886 7789999999999999999999998654    3456778999999


Q ss_pred             EEeCCC---ccHHHHHHH---HCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHH
Q 018013          278 VINYKA---EDIKTVFKE---EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKIL  351 (362)
Q Consensus       278 v~~~~~---~~~~~~~~~---~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~  351 (362)
                      ++++++   .++.+.+++   ..++++|++|||+|++.+..++++|+++|++|.+|.++..+...       |  ...++
T Consensus        82 vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~-------~--~~~l~  152 (189)
T d1gu7a2          82 VITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTI-------P--TSLYI  152 (189)
T ss_dssp             EEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEE-------C--HHHHH
T ss_pred             EEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccC-------c--HHHHH
Confidence            998764   233333332   34678999999999999999999999999999999887644321       1  23688


Q ss_pred             hcCeEEEEec
Q 018013          352 AKSQTVVCIH  361 (362)
Q Consensus       352 ~k~~~i~G~~  361 (362)
                      .|+++++||+
T Consensus       153 ~k~~~i~G~~  162 (189)
T d1gu7a2         153 FKNFTSAGFW  162 (189)
T ss_dssp             HSCCEEEECC
T ss_pred             HCCcEEEEEE
Confidence            9999999984

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.90  E-value=8.5e-24  Score=178.87  Aligned_cols=143  Identities=29%  Similarity=0.382  Sum_probs=117.8

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCC--CCCCCCCCCCCCCceEEEEE
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG--NDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~--~~~~~~~p~~~G~e~~G~V~  164 (362)
                      |||++++.++.+    +++++++.| +++++||+||+.++|||++|++++.|.++...  .....++|+++|||++|+|+
T Consensus         1 MKA~~~~~~G~p----l~i~dv~~P-~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~   75 (177)
T d1jvba1           1 MRAVRLVEIGKP----LSLQEIGVP-KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIE   75 (177)
T ss_dssp             CEEEEECSTTSC----CEEEECCCC-CCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEE
T ss_pred             CeEEEEEeCCCC----CEEEEeeCC-CCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEe
Confidence            899999988754    889999999 89999999999999999999999999765322  12245789999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec----------------------------CCCeeeEEEeeCCC-eeeCCCC-CHHHHHh-hh
Q 018013          165 AVGDSVNNVKVGTPAAIMT----------------------------FGSYAEFTMVPSKH-ILPVARP-DPEVVAM-LT  213 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~----------------------------~g~~~~~~~v~~~~-~~~ip~~-~~~~a~l-~~  213 (362)
                      ++|+++++|++||||++..                            +|+|+||+++|+.. ++++|+. +.+++++ ..
T Consensus        76 ~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~  155 (177)
T d1jvba1          76 EVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLE  155 (177)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGG
T ss_pred             eeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHH
Confidence            9999999999999998642                            28999999998654 6677764 3444444 46


Q ss_pred             hHHHHHHHHHHhCCCCCCEEEE
Q 018013          214 SGLTASIALEQAGPASGKKVLV  235 (362)
Q Consensus       214 ~~~tA~~al~~~~~~~g~~VlI  235 (362)
                      ++.+|++++..... .|++|||
T Consensus       156 ~~~~a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         156 EANEAIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             GHHHHHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHhhcc-cCCceEC
Confidence            88899999976654 6899987

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=1.1e-23  Score=178.63  Aligned_cols=140  Identities=22%  Similarity=0.247  Sum_probs=116.7

Q ss_pred             CCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           83 LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      |+..|||++++..+.+    +++++++.| .++++||+|||.++|||++|++++.|.++      ..++|+++|||++|+
T Consensus         1 m~~k~kA~v~~~~~~p----l~i~ev~~P-~~~~~evlVkv~a~gIC~sD~~~~~G~~~------~~~~P~vlGHE~~G~   69 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP----LVYKEFEIS-DIPRGSILVEILSAGVCGSDVHMFRGEDP------RVPLPIILGHEGAGR   69 (184)
T ss_dssp             CCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTCEEEEEEEEEECHHHHHHHTTCCT------TCCSSBCCCCEEEEE
T ss_pred             CCceEEEEEEecCCCC----cEEEEeeCC-CCCCCEEEEEEEEECCCCCchhheeccCC------ccccccccceeeeee
Confidence            3566899999887754    889999999 88999999999999999999999999764      346899999999999


Q ss_pred             EEEeCCCCC-----CCCCCCeEEEec-------------------------------------CCCeeeEEEee-CCCee
Q 018013          163 IAAVGDSVN-----NVKVGTPAAIMT-------------------------------------FGSYAEFTMVP-SKHIL  199 (362)
Q Consensus       163 V~~vG~~v~-----~~~~Gd~V~~~~-------------------------------------~g~~~~~~~v~-~~~~~  199 (362)
                      |+++|++|+     .+++||+|+..+                                     +|+|+||++++ +..++
T Consensus        70 V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~  149 (184)
T d1vj0a1          70 VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVL  149 (184)
T ss_dssp             EEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEE
T ss_pred             eeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEE
Confidence            999999986     468999998621                                     47999999996 57899


Q ss_pred             eCCCCCHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEc
Q 018013          200 PVARPDPEVVAMLTSGLTASIALEQAGPASGKKVLVTA  237 (362)
Q Consensus       200 ~ip~~~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~g  237 (362)
                      ++|++....    .++.+|++++.....++|++|+|+.
T Consensus       150 ~ip~~l~~~----~pl~~A~~a~~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         150 KVSEKITHR----LPLKEANKALELMESREALKVILYP  183 (184)
T ss_dssp             EECTTCCEE----EEGGGHHHHHHHHHHTSCSCEEEEC
T ss_pred             ECCCCCCHH----HHHHHHHHHHHHhCCCcCCEEEEee
Confidence            999864322    2455788888777669999999984

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=7.4e-23  Score=173.80  Aligned_cols=150  Identities=23%  Similarity=0.311  Sum_probs=125.0

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      .+..|++.++++|||+++.+... ++|++|||+| +|++|++++|+|+++|+ +|++++++++|++.++++|+++++|++
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~G-aG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEEC-CCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            45577888999999999998877 9999999998 59999999999999998 899999999999999999999999999


Q ss_pred             CccHHHH---HHH-HCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEE
Q 018013          283 AEDIKTV---FKE-EFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTV  357 (362)
Q Consensus       283 ~~~~~~~---~~~-~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i  357 (362)
                      +.+..+.   +.+ ..+.|+|+||||+|+ ..++.++++++++|+++.+|.......   ++   + .....++.|+++|
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~---~~---~-~~~~~l~~k~l~i  154 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDP---VP---F-KVYEWLVLKNATF  154 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCC---EE---E-CHHHHTTTTTCEE
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCc---cc---c-ccHHHHHHCCcEE
Confidence            8775443   333 346789999999997 678999999999999999997554322   11   1 1123578899999


Q ss_pred             EEecC
Q 018013          358 VCIHG  362 (362)
Q Consensus       358 ~G~~g  362 (362)
                      +|+++
T Consensus       155 ~G~~~  159 (182)
T d1vj0a2         155 KGIWV  159 (182)
T ss_dssp             EECCC
T ss_pred             EEEEe
Confidence            99864

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=8.7e-26  Score=194.54  Aligned_cols=151  Identities=19%  Similarity=0.264  Sum_probs=123.6

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCC-------CCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCce
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPI-------KPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEA  159 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~  159 (362)
                      +||++++.++.     +++++++.| ++       .++||+|||.++|||++|++++.|.++       ..+|+++|||+
T Consensus         2 ~kA~v~~~~~~-----le~~e~~~P-~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-------~~~P~v~GHE~   68 (201)
T d1kola1           2 NRGVVYLGSGK-----VEVQKIDYP-KMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-------AQVGLVLGHEI   68 (201)
T ss_dssp             EEEEEEEETTE-----EEEEEECCC-CSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-------CCTTCBCCCCE
T ss_pred             cEEEEEeCCCc-----eEEEEecCC-cccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-------cccceecccee
Confidence            58999998763     889999888 43       569999999999999999999998763       46799999999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEec--------------------------------------CCCeeeEEEeeCC--Cee
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIMT--------------------------------------FGSYAEFTMVPSK--HIL  199 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~~--------------------------------------~g~~~~~~~v~~~--~~~  199 (362)
                      +|+|+++|++|++|++||||.+..                                      .|+|+||+++|..  .++
T Consensus        69 ~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~  148 (201)
T d1kola1          69 TGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLL  148 (201)
T ss_dssp             EEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCE
T ss_pred             eeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEE
Confidence            999999999999999999997431                                      3899999999864  689


Q ss_pred             eCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 018013          200 PVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN  255 (362)
Q Consensus       200 ~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~  255 (362)
                      ++|++  +.+++++..++.++++++.....+.++    +| +|++|++++|+||.+||
T Consensus       149 ~iPd~~~~~~~~~~~~~~~~~~~a~~~~~~~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         149 KLPDRDKAMEKINIAEVVGVQVISLDDAPRGYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             ECSCHHHHHHTCCHHHHHTEEEECGGGHHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             ECCCCCChHHHHHHHHHHHHHHHHHHhCCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            99984  445566777777777776554434443    45 89999999999999886

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=3.2e-24  Score=179.22  Aligned_cols=139  Identities=28%  Similarity=0.373  Sum_probs=114.8

Q ss_pred             hhHHHHHH---HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHH
Q 018013          213 TSGLTASI---ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKT  288 (362)
Q Consensus       213 ~~~~tA~~---al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~  288 (362)
                      ++++|||.   +|.+.+. +++++|||+||+|++|.+++|+||.+|++|++++++++|.++++++|+++++++.+.. .+
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~-~~   81 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DG   81 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SS
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchh-ch
Confidence            35667764   4566666 6788999999999999999999999999999999999999999999999999875311 12


Q ss_pred             HHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          289 VFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ..+.+.++++|+|||++|++.++.++++|+++|+++.+|..++.....++         ..++.|+++++|+.
T Consensus        82 ~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~---------~~l~~k~~~i~G~~  145 (167)
T d1tt7a2          82 TLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATV---------YPFILRGVSLLGID  145 (167)
T ss_dssp             CCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECS---------HHHHTSCCEEEECC
T ss_pred             hhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCH---------HHHHHCCcEEEEEe
Confidence            23334568899999999999999999999999999999999875543222         24889999999963

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=1.3e-22  Score=169.69  Aligned_cols=147  Identities=20%  Similarity=0.281  Sum_probs=125.9

Q ss_pred             CCHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC
Q 018013          204 PDPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA  283 (362)
Q Consensus       204 ~~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~  283 (362)
                      ++.++|+++++++|||+++++...++|++|+|+| +|++|++++|+||.+|++|++++++++|++.++++|+++++|+.+
T Consensus         2 ~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~G-aG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~   80 (166)
T d1llua2           2 EFAEIAPILCAGVTVYKGLKQTNARPGQWVAISG-IGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQ   80 (166)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-ccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccc
Confidence            3578899999999999999987679999999998 699999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          284 EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       284 ~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++..+.+.....+..|+++++.+++.++.++++++++|+++.+|.......          .....++.|+++|+|++
T Consensus        81 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~----------~~~~~~~~k~~~i~Gs~  148 (166)
T d1llua2          81 EDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFP----------TPIFDVVLKGLHIAGSI  148 (166)
T ss_dssp             SCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEE----------EEHHHHHHTTCEEEECC
T ss_pred             hhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCcc----------CCHHHHHhCCcEEEEEe
Confidence            888877776665555565555667899999999999999999997654322          11346889999999975

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=1.5e-25  Score=189.45  Aligned_cols=161  Identities=19%  Similarity=0.228  Sum_probs=133.4

Q ss_pred             cceEEEEeccCCCccCc--eEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCC----CCCCCCCCCCCCCce
Q 018013           86 SFEKLVVHTLNHNFRDA--TIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDG----NDIGSRLPFDAGFEA  159 (362)
Q Consensus        86 ~~~a~~~~~~~~~~~~~--~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~----~~~~~~~p~~~G~e~  159 (362)
                      +|||++++.++.+ .+.  ++..+.+.| +++++||+|||++++||++|++++.|.++...    .......|.++|+|+
T Consensus         3 t~kA~v~~~~G~p-~~~l~l~~~~~p~p-~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           3 TAQAVLYTQHGEP-KDVLFTQSFEIDDD-NLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             EEEEEEESSCSCH-HHHCEEEEEEECTT-SCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             eeEEEEEccCCCc-ccccEEEEEECCCC-CCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            6899999987743 233  444566667 78999999999999999999999999876433    112346778899999


Q ss_pred             EEEEEEeCCCCCCCCCCCeEEEec--CCCeeeEEEeeCCCeeeCCCCCHHHHHhhhhHHHHHHHHHHh-CC-CCCCEEEE
Q 018013          160 VGLIAAVGDSVNNVKVGTPAAIMT--FGSYAEFTMVPSKHILPVARPDPEVVAMLTSGLTASIALEQA-GP-ASGKKVLV  235 (362)
Q Consensus       160 ~G~V~~vG~~v~~~~~Gd~V~~~~--~g~~~~~~~v~~~~~~~ip~~~~~~a~l~~~~~tA~~al~~~-~~-~~g~~VlI  235 (362)
                      +|+|+++|.++..++.||+|....  .|+|+||+++|++.++++|++.+..++++...+|||+++... .. ++|++|+|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a~~~~~~ta~~~l~~~~~~~~~g~~vli  160 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQ  160 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCCCCCEEEECCSSSCHHHHHH
T ss_pred             ccccccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhhccchHHHHHHHHHHHhcCCCCCCEEEE
Confidence            999999999999999999998754  489999999999999999987777777788889999998654 44 99999999


Q ss_pred             Ec-CCchHHHHHHH
Q 018013          236 TA-AAGGTGQFAVQ  248 (362)
Q Consensus       236 ~g-a~g~vG~~aiq  248 (362)
                      +| |+|++|++++|
T Consensus       161 ~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         161 DGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHTGGGSCEEEE
T ss_pred             ECccchhhhheEEe
Confidence            98 56889998776

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.89  E-value=2e-22  Score=169.86  Aligned_cols=148  Identities=23%  Similarity=0.268  Sum_probs=128.0

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      ++.++++++++.|||+++.+..+ ++|++|+|+| +|++|++++|+|+.+|+ +|++++.+++|++.++++|+++++|++
T Consensus         3 ~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G-~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~   81 (174)
T d1f8fa2           3 IELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK   81 (174)
T ss_dssp             GGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETT
T ss_pred             HHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeC-CCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCC
Confidence            35577889999999999988877 9999999998 59999999999999999 667778899999999999999999999


Q ss_pred             CccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          283 AEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       283 ~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++++.+.+++.+++|+|+||||+|+ +.++.++++++++|+++.+|........ +++       ...++.|+++|+|++
T Consensus        82 ~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~-~~~-------~~~~~~k~~~i~Gs~  153 (174)
T d1f8fa2          82 TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTA-QFD-------VNDLLLGGKTILGVV  153 (174)
T ss_dssp             TSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCC-CCC-------HHHHHHTTCEEEECS
T ss_pred             CcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCccc-ccC-------HHHHHHCCCEEEEEE
Confidence            9999999988888899999999996 6889999999999999999976543221 111       336899999999975

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.88  E-value=1e-21  Score=164.75  Aligned_cols=146  Identities=23%  Similarity=0.243  Sum_probs=123.1

Q ss_pred             HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC--
Q 018013          206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA--  283 (362)
Q Consensus       206 ~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~--  283 (362)
                      .+.|++..++++||+++++...++|++|+|+| +|++|++++|+|+.+|++|++++++++|++.++++|++..++.+.  
T Consensus         3 ~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~   81 (170)
T d1e3ja2           3 LEEGALLEPLSVGVHACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAK   81 (170)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccc
Confidence            46677888999999999988889999999998 799999999999999999999999999999999999987765443  


Q ss_pred             cc---HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEE
Q 018013          284 ED---IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVC  359 (362)
Q Consensus       284 ~~---~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G  359 (362)
                      .+   ..+.+....++++|+||||+|+ ..++.++++++++|+++.+|.......   +   +    +..++.|+++|+|
T Consensus        82 ~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~---~---~----~~~~~~k~i~i~g  151 (170)
T d1e3ja2          82 EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVT---V---P----LVNACAREIDIKS  151 (170)
T ss_dssp             SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCC---C---C----HHHHHTTTCEEEE
T ss_pred             cccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCC---c---C----HHHHHHCCCEEEE
Confidence            33   3345556678899999999997 568999999999999999997654221   1   1    2368899999999


Q ss_pred             ecC
Q 018013          360 IHG  362 (362)
Q Consensus       360 ~~g  362 (362)
                      +++
T Consensus       152 s~~  154 (170)
T d1e3ja2         152 VFR  154 (170)
T ss_dssp             CCS
T ss_pred             EEC
Confidence            864

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.88  E-value=2.8e-22  Score=168.58  Aligned_cols=146  Identities=26%  Similarity=0.379  Sum_probs=126.4

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINY  281 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~  281 (362)
                      ..++|+++++++|||++|.+...  ++|++|+|+| +|++|++++|+++.+|+ +|++++++++|++.++++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            56788999999999999988764  9999999998 69999999999999997 78888999999999999999999999


Q ss_pred             CCccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          282 KAEDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       282 ~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      .++++....+.+.+.++|++|||+|+ ..++.++++++++|+++.+|..+.  .       +++  ...++.|+++|+|+
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~--~-------~~~--~~~l~~k~~~i~Gs  153 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGE--L-------RFP--TIRVISSEVSFEGS  153 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSSC--C-------CCC--HHHHHHTTCEEEEC
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCccc--c-------cCC--HHHHHhCCcEEEEE
Confidence            98877777777778899999999997 579999999999999999996432  1       111  23588999999998


Q ss_pred             cC
Q 018013          361 HG  362 (362)
Q Consensus       361 ~g  362 (362)
                      +.
T Consensus       154 ~~  155 (172)
T d1h2ba2         154 LV  155 (172)
T ss_dssp             CS
T ss_pred             Ee
Confidence            63

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2e-21  Score=163.21  Aligned_cols=146  Identities=21%  Similarity=0.222  Sum_probs=125.2

Q ss_pred             HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCc
Q 018013          206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       206 ~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~  284 (362)
                      .+.|++..++++||+++++...++|++|+|+| +|++|++++|+|+.+|+ +|++++++++|++.++++|+++++++.++
T Consensus         3 ~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G-~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   81 (171)
T d1pl8a2           3 FEEGALIEPLSVGIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKE   81 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC-CCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccccccc
Confidence            46677888999999999988779999999998 69999999999999999 89999999999999999999999998887


Q ss_pred             cHHHHH---HHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          285 DIKTVF---KEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       285 ~~~~~~---~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +..+..   ....+.++|++|||+|+ ..++.++++++++|+++.+|..+....   +   +    ...++.|+++|+|+
T Consensus        82 ~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~---~---~----~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          82 SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTT---V---P----LLHAAIREVDIKGV  151 (171)
T ss_dssp             CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCC---C---C----HHHHHHTTCEEEEC
T ss_pred             ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCc---c---C----HHHHHHCCcEEEEE
Confidence            765443   34457899999999996 578999999999999999998765322   1   1    23688999999998


Q ss_pred             cC
Q 018013          361 HG  362 (362)
Q Consensus       361 ~g  362 (362)
                      ++
T Consensus       152 ~~  153 (171)
T d1pl8a2         152 FR  153 (171)
T ss_dssp             CS
T ss_pred             eC
Confidence            64

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.88  E-value=3.2e-22  Score=167.89  Aligned_cols=147  Identities=26%  Similarity=0.327  Sum_probs=127.6

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKA  283 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~  283 (362)
                      +.++|++++++.|||+++.+...++|++|+|+|++|++|++++|+++..|+ +|++++.+++|.++++++|+++++++++
T Consensus         3 ~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~   82 (170)
T d1jvba2           3 AVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASM   82 (170)
T ss_dssp             HHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCC
Confidence            468889999999999999887669999999999889999999999999996 9999999999999999999999999998


Q ss_pred             ccHHHHHHHH-CCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          284 EDIKTVFKEE-FPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       284 ~~~~~~~~~~-~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +++.+.+.+. .++++|++|||+|+ ..++.++++++++|+++.+|..+....   +   +    ...++.|+++|+|++
T Consensus        83 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~---~---~----~~~~~~k~i~i~Gs~  152 (170)
T d1jvba2          83 QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLH---Y---H----APLITLSEIQFVGSL  152 (170)
T ss_dssp             SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCC---C---C----HHHHHHHTCEEEECC
T ss_pred             cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccc---c---C----HHHHHhCCcEEEEEe
Confidence            8877666555 46789999999996 578999999999999999997654221   1   1    235889999999975

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=2e-22  Score=170.14  Aligned_cols=128  Identities=22%  Similarity=0.297  Sum_probs=106.9

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++.+..+++    +++++++.| +|+++||+|||.++|||++|++++.|.++      ...+|+++|||++|+|+++
T Consensus         1 m~a~~~~~~~~p----l~i~ev~~P-~pg~geVlVkv~a~gic~sDl~~~~g~~~------~~~~P~i~GhE~~G~V~~v   69 (179)
T d1uufa1           1 IKAVGAYSAKQP----LEPMDITRR-EPGPNDVKIEIAYCGVCHSDLHQVRSEWA------GTVYPCVPGHEIVGRVVAV   69 (179)
T ss_dssp             CEEEEBSSTTSC----CEEEECCCC-CCCTTEEEEEEEEEECCHHHHHHHHCTTS------CCCSSBCCCCCEEEEEEEE
T ss_pred             CeEEEEccCCCC----CEEEEecCC-CCCCCEEEEEEEEECCCCCcceeeeeeec------cccccccccccccccchhh
Confidence            788888876654    899999999 89999999999999999999999999764      3567999999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-------------------------------------CCCeeeEEEeeCCCeeeCCCCCHHHH
Q 018013          167 GDSVNNVKVGTPAAIMT-------------------------------------FGSYAEFTMVPSKHILPVARPDPEVV  209 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------------------------------------~g~~~~~~~v~~~~~~~ip~~~~~~a  209 (362)
                      |++|+++++||+|....                                     .|+|+||+++|+++++++|++.... 
T Consensus        70 G~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~-  148 (179)
T d1uufa1          70 GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM-  148 (179)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE-
T ss_pred             ccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh-
Confidence            99999999999996421                                     2789999999999999999653222 


Q ss_pred             HhhhhHHHHHHHHHHhC
Q 018013          210 AMLTSGLTASIALEQAG  226 (362)
Q Consensus       210 ~l~~~~~tA~~al~~~~  226 (362)
                      .+..++.++|+++.+..
T Consensus       149 ~~a~~l~~a~~a~~~a~  165 (179)
T d1uufa1         149 IRADQINEAYERMLRGD  165 (179)
T ss_dssp             ECGGGHHHHHHHHHTTC
T ss_pred             hHhchhHHHHHHHHHhC
Confidence            23345678888886544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.87  E-value=2.2e-22  Score=169.49  Aligned_cols=149  Identities=19%  Similarity=0.159  Sum_probs=123.2

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKA  283 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~  283 (362)
                      +++++.++.++.|||++++....++|++|+|+| +|++|++++|+|+.+|+ +|++++.+++|++.++++|+++++++++
T Consensus         3 ~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~   81 (174)
T d1jqba2           3 LENAVMITDMMTTGFHGAELADIEMGSSVVVIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN   81 (174)
T ss_dssp             HHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGG
T ss_pred             HHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEc-CCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccc
Confidence            345556779999999999876669999999998 69999999999999998 7999999999999999999999999998


Q ss_pred             ccHHHHHHHHC-CCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEe
Q 018013          284 EDIKTVFKEEF-PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCI  360 (362)
Q Consensus       284 ~~~~~~~~~~~-~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~  360 (362)
                      +++.+.+.+.+ ++|+|++|||+|+ ..++.++++++++|+++.+|........ +++...+     ....+++++.|.
T Consensus        82 ~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~-~~~~~~~-----~~~~~~~~i~g~  154 (174)
T d1jqba2          82 GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDAL-LIPRVEW-----GCGMAHKTIKGG  154 (174)
T ss_dssp             SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEE-EEETTTT-----GGGTBCCEEEEB
T ss_pred             hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcC-cCcHhHH-----HHHhCccEEEEe
Confidence            88887776664 5789999999996 6789999999999999999986653321 1111111     245678888875

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.87  E-value=2.2e-22  Score=173.09  Aligned_cols=141  Identities=18%  Similarity=0.268  Sum_probs=112.0

Q ss_pred             CCccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEE
Q 018013           83 LPESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGL  162 (362)
Q Consensus        83 ~p~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~  162 (362)
                      .+..|||++++..+.+    +++++++.| +|+++||+|||.++|||++|++.+.|.++       ..+|+++|||++|+
T Consensus         5 ~~~k~KAavl~~~~~~----l~i~ev~~P-~p~~~eVlVkV~a~giC~sDl~~~~G~~~-------~~~P~i~GHE~~G~   72 (198)
T d2jhfa1           5 KVIKCKAAVLWEEKKP----FSIEEVEVA-PPKAHEVRIKMVATGICRSDDHVVSGTLV-------TPLPVIAGHEAAGI   72 (198)
T ss_dssp             SCEEEEEEEBCSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHHTSSC-------CCSSBCCCCSEEEE
T ss_pred             CceEEEEEEEecCCCC----CEEEEEECC-CCCCCEEEEEEEEEecccccceeecCCcc-------cccceecccceeEE
Confidence            4567999999877654    899999999 89999999999999999999999999764       46799999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEe
Q 018013          163 IAAVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMV  193 (362)
Q Consensus       163 V~~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v  193 (362)
                      |+++|++++++++||||++..                                                 .|+|+||+++
T Consensus        73 Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v  152 (198)
T d2jhfa1          73 VESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV  152 (198)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEE
T ss_pred             EEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEe
Confidence            999999999999999998732                                                 1789999999


Q ss_pred             eCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEc
Q 018013          194 PSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLVTA  237 (362)
Q Consensus       194 ~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~g  237 (362)
                      |+..++++|++  ++..++...++.....+...+  ++|++|+|..
T Consensus       153 ~~~~~~~~p~~~~~e~l~~~~~~~~~v~~g~~~l--~~G~~VaVi~  196 (198)
T d2jhfa1         153 DEISVAKIDAAFALDPLITHVLPFEKINEGFDLL--RSGESIRTIL  196 (198)
T ss_dssp             EGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHH--HTTCCSEEEE
T ss_pred             CHHHeEECCCCCCHHHHHHHHHHHHhhhhCCcee--eCCCEEEEEE
Confidence            99999999985  332333223332222222111  6888888864

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.86  E-value=4.4e-24  Score=177.93  Aligned_cols=148  Identities=16%  Similarity=0.205  Sum_probs=125.3

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      .+|||++++..+..  ..+++++++.| ++++|||+|||+|+|||++|++...|.++.     ....|.++|+|++|+|+
T Consensus         2 ~~~ka~~~~~~g~~--~~l~~~~v~~p-~l~~~eVLVkV~a~gin~~D~~~~~g~~~~-----~~~~~~~~g~e~~G~v~   73 (162)
T d1tt7a1           2 TLFQALQAEKNADD--VSVHVKTISTE-DLPKDGVLIKVAYSGINYKDGLAGKAGGNI-----VREYPLILGIDAAGTVV   73 (162)
T ss_dssp             CEEEEEEECCGGGS--CCCEEEEEESS-SSCSSSEEEEECCEEECHHHHHHTSTTCTT-----CSSCSEECCSEEEEEEE
T ss_pred             CcEEEEEEEecCCC--eEEEEEEcCCC-CCCCCEEEEEEEEecccchhhheeeecccc-----cccceeeeeeecccccc
Confidence            46999999988764  45999999999 899999999999999999999999998753     34667889999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec-------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEE
Q 018013          165 AVGDSVNNVKVGTPAAIMT-------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQAGPASGKKVLV  235 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~-------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI  235 (362)
                      +  +.+.++++||+|+...       +|+|+||+++|++.++++|++  +.++|+++..++|||+++.......+++|||
T Consensus        74 ~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~~~~~~~~Vli  151 (162)
T d1tt7a1          74 S--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQ  151 (162)
T ss_dssp             E--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECSTTHHHHHHHTTT
T ss_pred             c--ccccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence            8  4567899999998764       589999999999999999995  6778888999999998765433356688999


Q ss_pred             EcCCchH
Q 018013          236 TAAAGGT  242 (362)
Q Consensus       236 ~ga~g~v  242 (362)
                      +|++|++
T Consensus       152 ~ga~G~v  158 (162)
T d1tt7a1         152 NRIQGRV  158 (162)
T ss_dssp             TCCSSEE
T ss_pred             ECCcceE
Confidence            9987764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=6.4e-22  Score=165.76  Aligned_cols=143  Identities=26%  Similarity=0.346  Sum_probs=118.0

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc
Q 018013          205 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~  284 (362)
                      +..+|+++++++|+|++|++...++|++|+|+| +|++|++++|+|+.+|+++++++++++++++++++|+++++++.+.
T Consensus         6 ~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~   84 (168)
T d1uufa2           6 LAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNA   84 (168)
T ss_dssp             HHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCH
T ss_pred             HHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEec-cchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchh
Confidence            455667888999999999876669999999998 6999999999999999999999999999999999999999998875


Q ss_pred             cHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          285 DIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       285 ~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      +...    ...+++|++||++|+ ..++.++++++++|+++.+|..+......         ....++.|+++|.|++
T Consensus        85 ~~~~----~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~---------~~~~l~~k~~~i~Gs~  149 (168)
T d1uufa2          85 DEMA----AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSP---------EVFNLIMKRRAIAGSM  149 (168)
T ss_dssp             HHHH----TTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC----------------CHHHHHTTTCEEEECC
T ss_pred             hHHH----HhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccc---------cHHHHHHCCcEEEEEe
Confidence            5322    334689999999996 57999999999999999999876533321         1335789999999975

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.86  E-value=3.7e-21  Score=161.85  Aligned_cols=146  Identities=22%  Similarity=0.194  Sum_probs=121.3

Q ss_pred             HHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCC
Q 018013          206 PEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKA  283 (362)
Q Consensus       206 ~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~  283 (362)
                      .++|.+.+++.|||+++.+.+. ++|++|+|+| +|++|++++|+|+++|+ +|++++++++|++.++++|+++++|+.+
T Consensus         3 ~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           3 LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             GGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            4678889999999999987776 9999999998 69999999999999998 8999999999999999999999999875


Q ss_pred             cc--HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhcc-CCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEE
Q 018013          284 ED--IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAV-YGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVC  359 (362)
Q Consensus       284 ~~--~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~-~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G  359 (362)
                      .+  ..+..+.++++|+|++||++|+ ..+..++..+++ +|+++.+|....... .++.  .      .++.++++|+|
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~-~~~~--~------~~~~~~~~i~G  152 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNER-LPLD--P------LLLLTGRSLKG  152 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCC-EEEC--T------HHHHTTCEEEE
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccc-cccC--H------HHHhCCCEEEE
Confidence            44  6677777888899999999996 677888888876 599999998664322 1111  1      24457889999


Q ss_pred             ec
Q 018013          360 IH  361 (362)
Q Consensus       360 ~~  361 (362)
                      ++
T Consensus       153 s~  154 (174)
T d1p0fa2         153 SV  154 (174)
T ss_dssp             CS
T ss_pred             EE
Confidence            74

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=8.4e-22  Score=160.77  Aligned_cols=128  Identities=14%  Similarity=0.206  Sum_probs=109.2

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      |||++++..+..  ..+++++++.| +++++||+|||.|+|||++|++...|.++.     ...+|+++|+|++|+|+++
T Consensus         1 MkA~v~~~~~~~--~~l~i~~v~~p-~~~~geVlVkV~a~gin~~D~~~~~G~~~~-----~~~~p~v~G~e~~G~V~~~   72 (146)
T d1o89a1           1 LQALLLEQQDGK--TLASVQTLDES-RLPEGDVTVDVHWSSLNYKDALAITGKGKI-----IRNFPMIPGIDFAGTVRTS   72 (146)
T ss_dssp             CEEEEEECC-----CEEEEEECCGG-GSCSCSEEEEEEEEECCHHHHHHHHTCSSC-----CCSSSBCCCSEEEEEEEEE
T ss_pred             CeEEEEEcCCCc--eEEEEEEcCCC-CCCCCEEEEEEeeccCccceeeEEEeeccc-----ccccceeccccccccceee
Confidence            899999987754  35788999999 899999999999999999999999998753     3567889999999999998


Q ss_pred             CCCCCCCCCCCeEEEec-------CCCeeeEEEeeCCCeeeCCCC--CHHHHHhhhhHHHHHHHHHH
Q 018013          167 GDSVNNVKVGTPAAIMT-------FGSYAEFTMVPSKHILPVARP--DPEVVAMLTSGLTASIALEQ  224 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------~g~~~~~~~v~~~~~~~ip~~--~~~~a~l~~~~~tA~~al~~  224 (362)
                      |.+  .+++||+|.+..       +|+|+||+++|++.++++|++  +.++|+++.++.||+..+..
T Consensus        73 ~~~--~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~~~  137 (146)
T d1o89a1          73 EDP--RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIINNQ  137 (146)
T ss_dssp             CST--TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHTTC
T ss_pred             ccC--CccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            774  799999998753       599999999999999999995  77888899888888765543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.86  E-value=3.6e-21  Score=160.95  Aligned_cols=146  Identities=26%  Similarity=0.313  Sum_probs=127.9

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc
Q 018013          205 DPEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~  284 (362)
                      ++++|+++++++|||++++....++|++|+|+| +|++|++++|+++..|++|++++.+++|.++++++|++.++++.++
T Consensus         3 ~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~   81 (168)
T d1rjwa2           3 FEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKE   81 (168)
T ss_dssp             HHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccc
Confidence            578999999999999999988889999999997 6999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          285 DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       285 ~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++.+.++..+.+..|+++++.+...+..++++++++|+++.+|.......   +       ....++.|+++++|++
T Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~---~-------~~~~~~~~~~~i~gs~  148 (168)
T d1rjwa2          82 DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMP---I-------PIFDTVLNGIKIIGSI  148 (168)
T ss_dssp             CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEE---E-------EHHHHHHTTCEEEECC
T ss_pred             hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCC---C-------CHHHHHHCCcEEEEEe
Confidence            98888877776666777666667889999999999999999997655332   1       1235889999999985

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.85  E-value=8e-21  Score=160.06  Aligned_cols=148  Identities=20%  Similarity=0.156  Sum_probs=121.9

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      ++++|.+++++.|||+++.+.+. ++|++|+|+| +|++|++++|+|+.+|+ +|++++++++|.+.++++|+++++++.
T Consensus         3 ~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~G-aGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           3 LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             HHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEec-chhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            56788889999999999988776 9999999999 58999999999999997 899999999999999999999999886


Q ss_pred             C--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEE
Q 018013          283 A--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVC  359 (362)
Q Consensus       283 ~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G  359 (362)
                      +  ++..+.++.+.++|+|++||++|+ ..++.++.+++++|+++.++.........  .+..      ..+.++++|+|
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~--~~~~------~~~~~~~~i~G  153 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI--ATRP------FQLVTGRTWKG  153 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCE--EECT------HHHHTTCEEEE
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccc--cccH------HHHHCCCEEEE
Confidence            4  557778888888899999999996 66788888999998888876655433321  1111      24567889998


Q ss_pred             ec
Q 018013          360 IH  361 (362)
Q Consensus       360 ~~  361 (362)
                      ++
T Consensus       154 s~  155 (176)
T d2fzwa2         154 TA  155 (176)
T ss_dssp             CS
T ss_pred             Ee
Confidence            74

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.85  E-value=8.5e-21  Score=159.91  Aligned_cols=147  Identities=18%  Similarity=0.167  Sum_probs=120.2

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      ++.++.+++++.|+|+++.+..+ ++|++|+|+| +|++|+.++|+++++|+ +|++++.+++|++.++++|+++++|+.
T Consensus         4 ~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           4 PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            46677888999999999988776 9999999998 69999999999999996 899999999999999999999999987


Q ss_pred             Ccc--HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEE
Q 018013          283 AED--IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVV  358 (362)
Q Consensus       283 ~~~--~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~  358 (362)
                      +.+  .....+.+.++|+|++||++|+ ..+..++..+.++ |+++.+|........   ....      .++.++++|+
T Consensus        83 ~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~---~~~~------~~~~~~~~i~  153 (176)
T d1d1ta2          83 DSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKML---TYDP------MLLFTGRTWK  153 (176)
T ss_dssp             GCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCE---EECT------HHHHTTCEEE
T ss_pred             ccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccccccc---CCCH------HHHhCCCEEE
Confidence            643  4445555778899999999996 4677777777665 999999987553331   1101      2556788999


Q ss_pred             Eec
Q 018013          359 CIH  361 (362)
Q Consensus       359 G~~  361 (362)
                      |++
T Consensus       154 Gs~  156 (176)
T d1d1ta2         154 GCV  156 (176)
T ss_dssp             ECS
T ss_pred             EEE
Confidence            975

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.84  E-value=1.1e-20  Score=158.82  Aligned_cols=126  Identities=19%  Similarity=0.189  Sum_probs=111.8

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      .+++|.+.+.+.|+|+++.+.+. ++|++|+|+| +|++|++++|+|+.+|+ +|++++.+++|++.++++|+++++++.
T Consensus         3 Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           3 LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            46778889999999999987777 9999999998 79999999999999999 799999999999999999999999875


Q ss_pred             C--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccC-CEEEEEcCccc
Q 018013          283 A--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVY-GRLIVIGMISQ  331 (362)
Q Consensus       283 ~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~  331 (362)
                      .  +......+.+.++|+|++|||+|. ..++.++++++++ |+++.+|....
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~  134 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD  134 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC
Confidence            4  345666667778899999999996 6899999999996 99999998654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=2.5e-21  Score=162.10  Aligned_cols=141  Identities=24%  Similarity=0.302  Sum_probs=117.2

Q ss_pred             HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-
Q 018013          206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE-  284 (362)
Q Consensus       206 ~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-  284 (362)
                      +.+|++.+++.|||+++++...++|++|+|+| +|++|++++|+|+.+|++|++++++++|.+.++++|+++++++.++ 
T Consensus         4 e~AApl~cag~Ta~~al~~~~~~~g~~vlI~G-aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~   82 (168)
T d1piwa2           4 HLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEG   82 (168)
T ss_dssp             HHHGGGGTHHHHHHHHHHHTTCSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEC-CCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchH
Confidence            45678889999999999987669999999998 5999999999999999999999999999999999999999988653 


Q ss_pred             cHHHHHHHHCCCceeEEEECCChH---HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEEec
Q 018013          285 DIKTVFKEEFPKGFDIIYESVGGD---MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVCIH  361 (362)
Q Consensus       285 ~~~~~~~~~~~~g~Dvvid~~g~~---~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G~~  361 (362)
                      ++.+    ...+++|+++||++..   .++.++++++++|+++.+|..+.... .++.         .++.|+++|.|++
T Consensus        83 ~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~-~~~~---------~~~~k~~~i~Gs~  148 (168)
T d1piwa2          83 DWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEM-LSLK---------PYGLKAVSISYSA  148 (168)
T ss_dssp             CHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCC-EEEC---------GGGCBSCEEEECC
T ss_pred             HHHH----hhhcccceEEEEecCCccchHHHHHHHhhccceEEEecccccccc-ccHH---------HHHhCCcEEEEEe
Confidence            3322    3346799999998852   47789999999999999997665332 1111         3778999999975

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.83  E-value=5.2e-20  Score=157.51  Aligned_cols=151  Identities=17%  Similarity=0.088  Sum_probs=124.5

Q ss_pred             HHHHHhhhhHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCCCc
Q 018013          206 PEVVAMLTSGLTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       206 ~~~a~l~~~~~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~  284 (362)
                      .+.++++..+.|||++++....++|++|+|+| +|++|++++++|+.+|+ +|++++.+++|++.++++|+++++++.++
T Consensus         2 ~d~~~l~d~~~ta~~a~~~a~v~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHHHHhCCCCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            46788999999999999876669999999998 69999999999999998 89999999999999999999999999988


Q ss_pred             cHHHHHHHH-CCCceeEEEECCCh----------------HHHHHHHHHhccCCEEEEEcCcccccCCCC-----CCCCC
Q 018013          285 DIKTVFKEE-FPKGFDIIYESVGG----------------DMFNLCLKALAVYGRLIVIGMISQYQGEHG-----WQPSN  342 (362)
Q Consensus       285 ~~~~~~~~~-~~~g~Dvvid~~g~----------------~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~-----~~~~~  342 (362)
                      ++.+.+.+. .+.|+|++|||+|.                +.++.++++++++|+++.+|..........     +....
T Consensus        81 ~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~  160 (195)
T d1kola2          81 PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLS  160 (195)
T ss_dssp             CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCC
T ss_pred             CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCcee
Confidence            887766665 56799999999983                479999999999999999998665433110     11111


Q ss_pred             hhhHHHHHHhcCeEEEE
Q 018013          343 YPGLCEKILAKSQTVVC  359 (362)
Q Consensus       343 ~~~~~~~~~~k~~~i~G  359 (362)
                        .....++.|++++.+
T Consensus       161 --~~~~~~~~k~~~i~~  175 (195)
T d1kola2         161 --IRFGLGWAKSHSFHT  175 (195)
T ss_dssp             --CCHHHHHHTTCEEEE
T ss_pred             --eeHHHHHhhcceecc
Confidence              112357789999875

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.83  E-value=3.4e-21  Score=162.13  Aligned_cols=106  Identities=18%  Similarity=0.231  Sum_probs=92.1

Q ss_pred             ceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEEEe
Q 018013           87 FEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIAAV  166 (362)
Q Consensus        87 ~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~~v  166 (362)
                      ||+++++.++.     +++++.|.| .++++||+||+.++|||++|++.+.+..+      ..++|+++|||++|+|+++
T Consensus         1 MKa~v~~~~~~-----l~i~e~p~P-~~~~~eVlIkv~a~gic~sD~~~~~~~~~------~~~~P~i~GhE~~G~V~~v   68 (177)
T d1jqba1           1 MKGFAMLGINK-----LGWIEKERP-VAGSYDAIVRPLAVSPCTSDIHTVFEGAL------GDRKNMILGHEAVGEVVEV   68 (177)
T ss_dssp             CEEEEEEETTE-----EEEEECCCC-CCCTTCEEEEEEEECCCHHHHHHHHHCTT------CCCSSEECCCCEEEEEEEE
T ss_pred             CeEEEEEeCCC-----eEEEEeeCC-CCCCCEEEEEEEEEecCCCcccccccCCC------CCCCCccCcceeeEEeeec
Confidence            89999998764     899999999 89999999999999999999987754332      3467999999999999999


Q ss_pred             CCCCCCCCCCCeEEEec-------------------------------CCCeeeEEEeeC--CCeeeCCCC
Q 018013          167 GDSVNNVKVGTPAAIMT-------------------------------FGSYAEFTMVPS--KHILPVARP  204 (362)
Q Consensus       167 G~~v~~~~~Gd~V~~~~-------------------------------~g~~~~~~~v~~--~~~~~ip~~  204 (362)
                      |++|++|++||||+...                               +|+|+||+++|.  ..++++|++
T Consensus        69 G~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~  139 (177)
T d1jqba1          69 GSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKD  139 (177)
T ss_dssp             CTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTT
T ss_pred             ccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCC
Confidence            99999999999998521                               389999999996  368999986

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.83  E-value=8.5e-20  Score=153.79  Aligned_cols=148  Identities=19%  Similarity=0.150  Sum_probs=119.8

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      ++++|++++++.|||+++.+.+. ++|++|+|+|+ |++|++++++++..|+ +|++++++++|.+.++++|+++++++.
T Consensus         3 le~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           3 LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            56788899999999999988777 99999999995 8999999999999996 999999999999999999999999876


Q ss_pred             C--ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEE
Q 018013          283 A--EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVC  359 (362)
Q Consensus       283 ~--~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G  359 (362)
                      +  +.+.+..+.+.++|+|++||++|. ..+..++.+++++|+.+.++..........+.        ..++.|+++|+|
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~G  153 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMN--------PMLLLSGRTWKG  153 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEEC--------THHHHTTCEEEE
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCccccccc--------HHHHhCCCEEEE
Confidence            4  456777777888899999999996 56788999999875444454443322211111        136679999999


Q ss_pred             ec
Q 018013          360 IH  361 (362)
Q Consensus       360 ~~  361 (362)
                      ++
T Consensus       154 s~  155 (176)
T d2jhfa2         154 AI  155 (176)
T ss_dssp             CS
T ss_pred             EE
Confidence            75

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.83  E-value=3.2e-20  Score=159.14  Aligned_cols=108  Identities=22%  Similarity=0.313  Sum_probs=97.3

Q ss_pred             ccceEEEEeccCCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEEE
Q 018013           85 ESFEKLVVHTLNHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLIA  164 (362)
Q Consensus        85 ~~~~a~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V~  164 (362)
                      -+|||++++.++.+    +++++++.| +|+++||+|||.++|||++|++++.|.++       ..+|.++|||++|+|+
T Consensus         7 ~~~KAav~~~~g~~----l~i~ev~~P-~p~~~eVlVkv~a~gICgsDlh~~~G~~~-------~~~P~i~GHE~~G~Vv   74 (198)
T d1p0fa1           7 ITCKAAVAWEPHKP----LSLETITVA-PPKAHEVRIKILASGICGSDSSVLKEIIP-------SKFPVILGHEAVGVVE   74 (198)
T ss_dssp             EEEEEEEBSSTTSC----CEEEEEEEC-CCCTTEEEEEEEEEECCHHHHHHHTTSSC-------CCSSBCCCCCEEEEEE
T ss_pred             eEEEEEEEccCCCC----CEEEEEECC-CCCCCEEEEEEEEEEEecccceeeeeccc-------cccccccceeeeeeee
Confidence            47999999987754    899999999 88999999999999999999999998763       4679999999999999


Q ss_pred             EeCCCCCCCCCCCeEEEec-------------------------------------------------CCCeeeEEEeeC
Q 018013          165 AVGDSVNNVKVGTPAAIMT-------------------------------------------------FGSYAEFTMVPS  195 (362)
Q Consensus       165 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~g~~~~~~~v~~  195 (362)
                      ++|++++++++||||++..                                                 .|+|+||+.+++
T Consensus        75 ~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~  154 (198)
T d1p0fa1          75 SIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD  154 (198)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred             ecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecH
Confidence            9999999999999998732                                                 168999999999


Q ss_pred             CCeeeCCCC
Q 018013          196 KHILPVARP  204 (362)
Q Consensus       196 ~~~~~ip~~  204 (362)
                      ..++++|++
T Consensus       155 ~~~~kip~~  163 (198)
T d1p0fa1         155 IAVAKIDPK  163 (198)
T ss_dssp             TSEEEECTT
T ss_pred             HHEEECCCC
Confidence            999999975

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.82  E-value=1.4e-19  Score=152.18  Aligned_cols=147  Identities=18%  Similarity=0.092  Sum_probs=116.8

Q ss_pred             CHHHHHhhhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          205 DPEVVAMLTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      ++++|.+.+++.|+|+++.+.+. ++|++|+|+| +|++|+.++++++..|+ +|++++++++|++.++++|+++++|+.
T Consensus         3 ~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           3 LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             HHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            46788889999999999987776 9999999998 69999999999998887 899999999999999999999999987


Q ss_pred             Ccc--HHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhcCeEEEE
Q 018013          283 AED--IKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVVC  359 (362)
Q Consensus       283 ~~~--~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~G  359 (362)
                      +++  ..+..+.+.++|+|++||++|+ ..+..++.+++++|.++.++.........     .    ...++.++++|+|
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~-----~----~~~~~~~~~~i~G  152 (175)
T d1cdoa2          82 DHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA-----T----RPIQLIAGRTWKG  152 (175)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEE-----E----CHHHHHTTCEEEE
T ss_pred             CcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccC-----c----cHHHHHCCcEEEE
Confidence            543  4566666778899999999996 56788888888875555444443322211     1    1136678899999


Q ss_pred             ec
Q 018013          360 IH  361 (362)
Q Consensus       360 ~~  361 (362)
                      ++
T Consensus       153 s~  154 (175)
T d1cdoa2         153 SM  154 (175)
T ss_dssp             CS
T ss_pred             EE
Confidence            74

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.52  E-value=7.4e-14  Score=112.75  Aligned_cols=134  Identities=13%  Similarity=0.066  Sum_probs=97.7

Q ss_pred             cceEEEEecc--CCCccCceEEEeccCCCCCCCCeEEEEEeEEeeChhhhhhhcCCccCCCCCCCCCCCCCCCCceEEEE
Q 018013           86 SFEKLVVHTL--NHNFRDATIKVRAPLRLPIKPNHVLVKIIFAGVNASDVNFSSGRYFSDGNDIGSRLPFDAGFEAVGLI  163 (362)
Q Consensus        86 ~~~a~~~~~~--~~~~~~~~~~~~~~~p~~~~~~eV~V~v~~~~i~~~D~~~~~g~~~~~~~~~~~~~p~~~G~e~~G~V  163 (362)
                      +.|+|++...  +.+..+.+++++.++| ++++|||+||++|.++++......   .+       ......+..+++|+|
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip-~~~~gevLvk~~~~svDp~~R~~~---~~-------~~~g~~~~g~~vg~V   71 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELKTVELP-PLKNGEVLLEALFLSVDPYMRIAS---KR-------LKEGAVMMGQQVARV   71 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEEEEECC-CCCTTCEEEEEEEEECCTHHHHHG---GG-------SCTTSBCCCCEEEEE
T ss_pred             ccEEEEEccCCCCCCcccceEEEEEECC-CCCCCEEEEEEEEEeEcccccccc---cc-------cccCCccccceEEEE
Confidence            3577777765  3333456999999999 899999999999999988543322   11       112224566889999


Q ss_pred             EEeCCCCCCCCCCCeEEEecCCCeeeEEEeeCCCeeeCCCC-------CHHHHHhhhhHHHHHH-HHHHhCCCCCCEEEE
Q 018013          164 AAVGDSVNNVKVGTPAAIMTFGSYAEFTMVPSKHILPVARP-------DPEVVAMLTSGLTASI-ALEQAGPASGKKVLV  235 (362)
Q Consensus       164 ~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~ip~~-------~~~~a~l~~~~~tA~~-al~~~~~~~g~~VlI  235 (362)
                      ++  +++++|++||+|++.  ++|+||.+++...+.++|.+       ....+++...++|||+ .|.... +.|++|++
T Consensus        72 v~--S~~~~f~~GD~V~g~--~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~~-k~Getvv~  146 (147)
T d1v3va1          72 VE--SKNSAFPAGSIVLAQ--SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNGA-NLGKAVVT  146 (147)
T ss_dssp             EE--ESCTTSCTTCEEEEC--CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHTTC-CSSEEEEE
T ss_pred             EE--eCCCcccCCCEEEEc--cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhCCC-CCCCEEEe
Confidence            87  667899999999865  68999999999999999753       1234456677887544 664332 78999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=1e-14  Score=103.77  Aligned_cols=71  Identities=35%  Similarity=0.506  Sum_probs=64.4

Q ss_pred             CHHHHHhhhhHHHHHHHHH---HhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC
Q 018013          205 DPEVVAMLTSGLTASIALE---QAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV  275 (362)
Q Consensus       205 ~~~~a~l~~~~~tA~~al~---~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~  275 (362)
                      +.++++++++++|||.++.   +... +++++|||+|++|++|.+++|+++.+|++|++++++++|.++++++|+
T Consensus         3 ~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           3 ARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence            5688899999999998775   3444 899999999999999999999999999999999999999999999985

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.59  E-value=7.9e-08  Score=83.78  Aligned_cols=108  Identities=17%  Similarity=0.203  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEE-EeCCC-ccHHHHHHHHC--CCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRV-INYKA-EDIKTVFKEEF--PKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~-~~~~~~~~~~~--~~g~Dvvid~  304 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+..++.+...+ .|..+ +++.+.+.+..  -+++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   83 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN   83 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence            68999999999999999999999999999999999888888887776533 34444 23333333322  1469999999


Q ss_pred             CCh-----------H---------------HHHHHHHHhcc--CCEEEEEcCcccccCCC
Q 018013          305 VGG-----------D---------------MFNLCLKALAV--YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~  336 (362)
                      +|.           +               ..+.+++.|++  +|+||.+++.....+..
T Consensus        84 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~  143 (248)
T d2d1ya1          84 AAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ  143 (248)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT
T ss_pred             CcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccc
Confidence            872           1               23356666754  68999999988766644

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.51  E-value=2.3e-07  Score=81.01  Aligned_cols=108  Identities=23%  Similarity=0.237  Sum_probs=78.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEE---eCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVI---NYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~---~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      +|++++|+||++|+|.+.++.+...|++|+.+++++++.+.+. +++...++   |..+ +++.+.+....  -+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            6899999999999999999999999999999999998887764 67765433   2223 23333333321  1569999


Q ss_pred             EECCChH--------------------------HHHHHHHHhc-cCCEEEEEcCcccccCCC
Q 018013          302 YESVGGD--------------------------MFNLCLKALA-VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~  336 (362)
                      ++++|..                          ..+.+++.|+ .+|+||.+++.....+..
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~  146 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE  146 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc
Confidence            9999831                          2335566675 579999999988766543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.50  E-value=8.9e-08  Score=83.18  Aligned_cols=108  Identities=27%  Similarity=0.388  Sum_probs=77.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc---EEEeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD---RVINYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~---~v~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+. +++..   ...|..+ +++.+.+....  -+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5899999999999999999999999999999999999887774 45543   2344444 33333333321  2469999


Q ss_pred             EECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          302 YESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      ++++|..                          ..+.+++.|  +.+|+||.+++.....+..
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~  145 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG  145 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC
Confidence            9998731                          234566666  3479999999988765543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.46  E-value=2.6e-07  Score=80.66  Aligned_cols=108  Identities=24%  Similarity=0.233  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcE---EEeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDR---VINYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~---v~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+ ++++...   ..|..+ +++.+.++...  -+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            689999999999999999999999999999999998887766 4565432   234333 33333333321  1469999


Q ss_pred             EECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          302 YESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|+|..                          ..+.+++.|.  .+|+||.+++........
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~  146 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA  146 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc
Confidence            9998721                          2234455443  469999999988866644

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.44  E-value=6.8e-07  Score=78.17  Aligned_cols=108  Identities=17%  Similarity=0.200  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEE---EeCCC-ccHHHHHH---HHCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRV---INYKA-EDIKTVFK---EEFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v---~~~~~-~~~~~~~~---~~~~~g  297 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+.    +.|....   .|..+ +++.+.+.   +..+..
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999988876653    3454322   33333 23333333   234556


Q ss_pred             eeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|.           +               ..+.+++.+.  .+|++|.+++........
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~  153 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP  153 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc
Confidence            9999999882           1               1234555553  469999999988765543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=2.2e-07  Score=81.00  Aligned_cols=107  Identities=24%  Similarity=0.288  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc-EE--EeCCC-ccHHHHHHHHCC--CceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD-RV--INYKA-EDIKTVFKEEFP--KGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~-~v--~~~~~-~~~~~~~~~~~~--~g~Dvvi  302 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+.+.... ..  .|..+ +++.+.+.....  +++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            689999999999999999999999999999999999998888653333 22  33333 333333333221  4699999


Q ss_pred             ECCChH---------------------------HHHHHHHHhcc-CCEEEEEcCcccccCC
Q 018013          303 ESVGGD---------------------------MFNLCLKALAV-YGRLIVIGMISQYQGE  335 (362)
Q Consensus       303 d~~g~~---------------------------~~~~~~~~l~~-~G~~v~~G~~~~~~~~  335 (362)
                      +++|..                           ..+.+++.|++ +|++|.+++.......
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~  145 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ  145 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc
Confidence            998720                           23345556654 5899999998876554

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1.4e-06  Score=75.44  Aligned_cols=106  Identities=19%  Similarity=0.239  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc--EEEeCCCcc-HHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD--RVINYKAED-IKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~--~v~~~~~~~-~~~~~~~~~~~g~Dvvid~  304 (362)
                      .|+++||+||++|+|.+.++.+...|++|+++++++++.+.+. +++..  ...|..+.+ +.+.+. .. +++|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~-g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG-SV-GPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT-TC-CCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH-Hh-CCceEEEec
Confidence            6899999999999999999999999999999999999888775 44433  233444432 223322 22 469999999


Q ss_pred             CChH--------------------------HHHHHHHH-hc--cCCEEEEEcCcccccCCC
Q 018013          305 VGGD--------------------------MFNLCLKA-LA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       305 ~g~~--------------------------~~~~~~~~-l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      +|..                          ..+.+++. ++  .+|++|.+++........
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~  144 (244)
T d1pr9a_          84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT  144 (244)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred             cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc
Confidence            8731                          12344553 33  469999999988766543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.41  E-value=3.6e-07  Score=80.07  Aligned_cols=108  Identities=18%  Similarity=0.270  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEE---EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRV---INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+.    +.|....   .|..+ +++.+.++...  -+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999988876653    3455422   34333 33333333321  1469


Q ss_pred             eEEEECCChH---------------------------HHHHHHHHh--ccCCEEEEEcCcccccCCC
Q 018013          299 DIIYESVGGD---------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       299 Dvvid~~g~~---------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~~  336 (362)
                      |++++++|..                           ..+.+++.|  +.+|++|.+++.....+..
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~  150 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP  150 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc
Confidence            9999998721                           223455555  4679999999988766543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.40  E-value=3.6e-07  Score=79.27  Aligned_cols=108  Identities=21%  Similarity=0.250  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc-EE--EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD-RV--INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~-~v--~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+. +++-. ..  .|..+ +++.+.+++..  -+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            6899999999999999999999999999999999999887764 45433 22  34434 23333333322  1469999


Q ss_pred             EECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          302 YESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|+|..                          ..+.+++.|.  .+|+||.+++.....+..
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~  147 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV  147 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc
Confidence            9999831                          1223445553  469999999988866643

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.39  E-value=4.5e-07  Score=79.19  Aligned_cols=109  Identities=21%  Similarity=0.231  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcEE---EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDRV---INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+ +++|....   .|..+ +++.+.++...  -+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            589999999999999999999999999999999998887766 46776532   34443 33333333321  1469999


Q ss_pred             EECCChH--------------------------HHHHHHHH-hc--cCCEEEEEcCcccccCCCC
Q 018013          302 YESVGGD--------------------------MFNLCLKA-LA--VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~-l~--~~G~~v~~G~~~~~~~~~~  337 (362)
                      ++++|..                          ..+.++.. ++  .+|+||.+++.....+...
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  148 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL  148 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT
T ss_pred             EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc
Confidence            9998831                          12233443 33  4699999999887766443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.37  E-value=8.6e-07  Score=77.52  Aligned_cols=107  Identities=20%  Similarity=0.237  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE---EEeCCC-ccHHHHHHH---HCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR---VINYKA-EDIKTVFKE---EFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~---v~~~~~-~~~~~~~~~---~~~~g  297 (362)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.    +.+...   ..|..+ +++.+.++.   ..++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999988876653    234332   234433 233333333   22445


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|..                          ..+.+++.|+  .+|+||.+++.......
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~  152 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA  152 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc
Confidence            99999998831                          2234555553  46999999988876554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.35  E-value=1.2e-06  Score=76.14  Aligned_cols=103  Identities=21%  Similarity=0.260  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-----HHcCCcEE---EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-----KELGVDRV---INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-----~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +|++++|+||++|+|.+.++.+...|++|+++++++++.+.+     ++.|....   .|..+ +++.+.++...  -++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999999999998876544     34565432   24444 33333333321  146


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhc--cCCEEEEEcCccc
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALA--VYGRLIVIGMISQ  331 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~  331 (362)
                      +|++++|+|..                          ..+.+++.|+  .+|++|.+++...
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~  145 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV  145 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchh
Confidence            99999998831                          2345667774  4689999988654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.35  E-value=1.5e-06  Score=75.78  Aligned_cols=107  Identities=18%  Similarity=0.253  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcE-E--EeCCC-ccHHH---HHHHHCCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDR-V--INYKA-EDIKT---VFKEEFPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~-v--~~~~~-~~~~~---~~~~~~~~g  297 (362)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+    ++.+... .  .|..+ +++.+   .+.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998876655    3455543 2  24333 22323   233344556


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|..                          ..+.+...+  +.+|++|.+++.....+.
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~  150 (258)
T d1ae1a_          85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL  150 (258)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC
T ss_pred             cEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence            99999998831                          122333333  457999999998876654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=2.6e-06  Score=73.60  Aligned_cols=106  Identities=18%  Similarity=0.199  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCc--EEEeCCCcc-HHHHHHHHCCCceeEEEEC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVD--RVINYKAED-IKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~--~v~~~~~~~-~~~~~~~~~~~g~Dvvid~  304 (362)
                      .|+++||+||++|+|.++++.+...|++|+++++++++.+.+. +++..  ...|..+.+ +.+.++ .. +++|++++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-~~-g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG-GI-GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT-TC-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHH-Hc-CCCeEEEEC
Confidence            5899999999999999999999999999999999998887764 44332  223444432 222222 22 469999999


Q ss_pred             CCh-----------H---------------HHHHHHHH-hc--cCCEEEEEcCcccccCCC
Q 018013          305 VGG-----------D---------------MFNLCLKA-LA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       305 ~g~-----------~---------------~~~~~~~~-l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      +|.           +               ..+.+++. +.  .+|++|.+++........
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~  142 (242)
T d1cyda_          82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP  142 (242)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred             CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC
Confidence            872           1               11234443 32  358999999987766543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.33  E-value=7.8e-07  Score=77.59  Aligned_cols=109  Identities=18%  Similarity=0.266  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEE---EeCCC-ccHHHHHHHHC--CCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRV---INYKA-EDIKTVFKEEF--PKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~  298 (362)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+    ++.|....   .|..+ +++.+.+....  -+++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999998877655    34565422   23333 23333333321  1469


Q ss_pred             eEEEECCChH-------------------------HHHHHHHHhcc--CCEEEEEcCcccccCCCC
Q 018013          299 DIIYESVGGD-------------------------MFNLCLKALAV--YGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       299 Dvvid~~g~~-------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~~  337 (362)
                      |++++|+|..                         ..+.+++.+.+  +|++|.+++.....+...
T Consensus        90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~  155 (255)
T d1fmca_          90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN  155 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT
T ss_pred             CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc
Confidence            9999998831                         12234444543  678999988877665443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=5.1e-07  Score=78.28  Aligned_cols=107  Identities=19%  Similarity=0.195  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EE--EeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RV--INYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v--~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .|++++|+||++|+|.+.+..+...|++|+++++++++.+.+.    +.|.. +.  .|..+ +++.+.++..  .-+.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999888899999999999998877663    35544 22  34444 2233333322  12459


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~  335 (362)
                      |++++|+|..                          ..+.+++.|.+  .|+||.+++.....+.
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~  150 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV  150 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC
Confidence            9999999831                          22345566644  5799999998886654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.32  E-value=1.1e-06  Score=76.73  Aligned_cols=109  Identities=18%  Similarity=0.275  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-hHHHHHH-----HcCCcEEE---eCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-HKAQLLK-----ELGVDRVI---NYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-~~~~~l~-----~~g~~~v~---~~~~-~~~~~~~~~~~--~~  296 (362)
                      +|+++||+||++|+|.+.++.+...|++|+++.+++ ++.+.+.     +.|....+   |..+ +++.+.+....  -+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999863 4444332     34554332   3333 23333333321  14


Q ss_pred             ceeEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCcccccCCCC
Q 018013          297 GFDIIYESVGGD--------------------------MFNLCLKALAV--YGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       297 g~Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~G~~~~~~~~~~  337 (362)
                      ++|++++++|..                          ..+.+++.|++  +|++|.+++.....+...
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~  151 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN  151 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC
Confidence            699999998821                          23345666654  689999999888666443

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.30  E-value=1.6e-06  Score=75.62  Aligned_cols=108  Identities=13%  Similarity=0.153  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----Hc--CCcEE---EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----EL--GVDRV---INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~--g~~~v---~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .|++++|+||++|+|.++++.+...|++|+++++++++.+.+.    +.  +...+   .|..+ +++.+.+....  -+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999999999999999988876553    22  22222   24444 33333333321  14


Q ss_pred             ceeEEEECCCh--H-------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          297 GFDIIYESVGG--D-------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       297 g~Dvvid~~g~--~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      ++|++++++|.  .                         ..+.+++.|+  .+|+||.+++.....+..
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~  151 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG  151 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC
Confidence            69999999872  0                         2224445553  579999999988766543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.30  E-value=6.8e-07  Score=77.81  Aligned_cols=107  Identities=22%  Similarity=0.306  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE---EEeCCC-ccHHHHHHHH--CCCce
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR---VINYKA-EDIKTVFKEE--FPKGF  298 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~---v~~~~~-~~~~~~~~~~--~~~g~  298 (362)
                      .++.+||+||++|+|.++++.+...|++|+++++++++.+.+.    +.|...   ..|..+ +++.+.+...  .-+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            5799999999999999999999899999999999988876553    455442   234443 2333333332  12469


Q ss_pred             eEEEECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          299 DIIYESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       299 Dvvid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      |+++++.|..                          ..+.+++.|  +.+|+||.+++.....+.
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~  153 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN  153 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC
Confidence            9999998731                          223455555  346999999998876554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.29  E-value=1.3e-06  Score=76.00  Aligned_cols=108  Identities=14%  Similarity=0.162  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC--c-EE--EeCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV--D-RV--INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~--~-~v--~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      +|+++||+||++|+|.+.++.+...|++|+++++++++.+.+. +++.  . ..  .|..+ +++.+.+....  -+++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5899999999999999999999999999999999998887764 3332  2 22  23333 22333333221  14699


Q ss_pred             EEEECCChH--------------------------HHHHHHHHhcc---CCEEEEEcCcccccCCC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKALAV---YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~  336 (362)
                      ++++|+|..                          ..+.+++.|.+   +|++|.+++.....+..
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~  150 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP  150 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC
Confidence            999998731                          23345666644   35899999988765543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.29  E-value=1.6e-06  Score=75.10  Aligned_cols=108  Identities=16%  Similarity=0.218  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH--HHHHHHcCCcEE---EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK--AQLLKELGVDRV---INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~--~~~l~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      +|++++|+||++|+|.++++.+...|++|+++++++++  .+.+++.|....   .|..+ +++.+.+....  -+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999999987543  233456776432   23333 23333333321  146999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      +++|+|.           +               ..+.+++.|+  .+|++|.+++.....+..
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~  147 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE  147 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCc
Confidence            9999883           1               2234555564  358999999988766543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.9e-06  Score=74.96  Aligned_cols=109  Identities=20%  Similarity=0.193  Sum_probs=75.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc-----CCcE---EEeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL-----GVDR---VINYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~-----g~~~---v~~~~~-~~~~~~~~~~~--~~  296 (362)
                      .|+++||+||++|+|.++++.+...|++|++++++.++.+.+. ++     +...   ..|..+ +++.+.++...  -+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999988876653 22     2222   234444 33333333321  14


Q ss_pred             ceeEEEECCCh---H---------------HHHHHHHHhcc-----CCEEEEEcCcccccCCCC
Q 018013          297 GFDIIYESVGG---D---------------MFNLCLKALAV-----YGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       297 g~Dvvid~~g~---~---------------~~~~~~~~l~~-----~G~~v~~G~~~~~~~~~~  337 (362)
                      ++|++++++|.   +               ..+.+++.|.+     +|+||.+++.....+...
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~  145 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ  145 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC
Confidence            69999999983   1               22345555643     489999999887666443

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.27  E-value=1.3e-06  Score=77.04  Aligned_cols=107  Identities=22%  Similarity=0.265  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEE---EeCCC-ccHHHHHHHHC--CCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRV---INYKA-EDIKTVFKEEF--PKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~Dvv  301 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+. ++|....   .|..+ +++.+.+....  -+++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            5899999999999999999999999999999999999887764 5665422   24333 23333333221  1469999


Q ss_pred             EECCCh------------H-------------------HHHHHHHHh-ccCCEEEEEcCcccccCC
Q 018013          302 YESVGG------------D-------------------MFNLCLKAL-AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       302 id~~g~------------~-------------------~~~~~~~~l-~~~G~~v~~G~~~~~~~~  335 (362)
                      ++++|.            +                   ..+.+++.| +.+|++|.+.+.....+.
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~  149 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPN  149 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTT
T ss_pred             cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCC
Confidence            999872            0                   112344545 457999999887765553

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.5e-06  Score=76.23  Aligned_cols=109  Identities=21%  Similarity=0.225  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-----cCCc-EEEeCCCcc---HHHHHHHH--CCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-----LGVD-RVINYKAED---IKTVFKEE--FPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-----~g~~-~v~~~~~~~---~~~~~~~~--~~~g  297 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++++.+.+     .+.. ..+..+..+   ........  ..+.
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   92 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG   92 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999999998877642     3332 222222221   22222211  1256


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhc-cCCEEEEEcCcccccCCCC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALA-VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~-~~G~~v~~G~~~~~~~~~~  337 (362)
                      +|+++++.|..                          ..+.++..|+ .+|++|.+++..+..+...
T Consensus        93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~  159 (269)
T d1xu9a_          93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM  159 (269)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT
T ss_pred             ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC
Confidence            89999987631                          2224444554 4799999999887666443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.23  E-value=1.6e-06  Score=77.44  Aligned_cols=108  Identities=26%  Similarity=0.339  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC---------HhHHHHH----HHcCCcEEEeCCC-ccHHHHHHHH-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG---------EHKAQLL----KELGVDRVINYKA-EDIKTVFKEE-  293 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~---------~~~~~~l----~~~g~~~v~~~~~-~~~~~~~~~~-  293 (362)
                      +|+++||+||++|+|.+.++.+...|++|++++++         .++.+.+    ...+.....+..+ ++..+.+... 
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            58999999999999999999999999999998653         3333332    3345555566655 3344433332 


Q ss_pred             -CCCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          294 -FPKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       294 -~~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                       .-+++|++++|+|.           +               ..+.+++.|+  .+|+||.+++.....+..
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC
Confidence             12469999999882           1               2345666664  458999999988765543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.22  E-value=4.3e-06  Score=71.75  Aligned_cols=101  Identities=27%  Similarity=0.396  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE-eCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI-NYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.   ++.+...+. |.. +.+....+ .. +.+|++++++|.
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l---~~~~~~~~~~Dv~-~~~~~~~~-~~-g~iD~lVnnAG~   76 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KRSGHRYVVCDLR-KDLDLLFE-KV-KEVDILVLNAGG   76 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHTCSEEEECCTT-TCHHHHHH-HS-CCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---HhcCCcEEEcchH-HHHHHHHH-Hh-CCCcEEEecccc
Confidence            589999999999999999999999999999999987654   445544332 322 33444433 33 359999999873


Q ss_pred             H--------------------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          308 D--------------------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       308 ~--------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      .                          ..+.+++.++  ..|++|.+++.......
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~  132 (234)
T d1o5ia_          77 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI  132 (234)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             cCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc
Confidence            1                          1234445554  45899999887765553

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.22  E-value=2.5e-06  Score=73.28  Aligned_cols=105  Identities=20%  Similarity=0.217  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc------cHHHHHHH-HCCCceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAE------DIKTVFKE-EFPKGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~------~~~~~~~~-~~~~g~Dvv  301 (362)
                      .|++|||+||++|+|.++++.+...|++|+.++.++.+..     ...........      .+...+.. ...+++|++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            4899999999999999999999999999999887654311     11112221111      11122222 234579999


Q ss_pred             EECCCh----H-----------------------HHHHHHHHhccCCEEEEEcCcccccCCCCC
Q 018013          302 YESVGG----D-----------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       302 id~~g~----~-----------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~  338 (362)
                      ++++|.    .                       ..+.+++.|+++|++|.+++.....+...+
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~  139 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGM  139 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTB
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCC
Confidence            999872    0                       223466778999999999998876665433

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.20  E-value=2.9e-06  Score=74.14  Aligned_cols=108  Identities=16%  Similarity=0.209  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-HHH----HHHHcCCcEE---EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-KAQ----LLKELGVDRV---INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-~~~----~l~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +|++++|+||++|+|.++++.+...|++|+++.++.+ +.+    .+++.|....   .|..+ +++.+.++...  -++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999998744 333    3345665422   23333 23333333321  146


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhcc---CCEEEEEcCcccccCCC
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALAV---YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~~---~G~~v~~G~~~~~~~~~  336 (362)
                      +|++++++|..                          ..+.+++.|.+   +++|+.+++.....+..
T Consensus        86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~  153 (261)
T d1geea_          86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT
T ss_pred             CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc
Confidence            99999998731                          23345665632   34688888887765543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=6.3e-06  Score=71.70  Aligned_cols=106  Identities=23%  Similarity=0.259  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCC-cEE----EeCCC-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGV-DRV----INYKA-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~-~~v----~~~~~-~~~~~~~~~~~--~~  296 (362)
                      +|+++||+||++|+|.++++.+...|++|+.+++++++.+.+.    +.+. ..+    .|..+ +++.+.+....  -+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999999999999999988877653    3332 122    24443 33333333321  14


Q ss_pred             ceeEEEECCChH--------------------------HHHHHHHHhc----cCCEEEEEcCcccccC
Q 018013          297 GFDIIYESVGGD--------------------------MFNLCLKALA----VYGRLIVIGMISQYQG  334 (362)
Q Consensus       297 g~Dvvid~~g~~--------------------------~~~~~~~~l~----~~G~~v~~G~~~~~~~  334 (362)
                      ++|++++|+|..                          ..+.+++.+.    .+|++|.+++.+....
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~  156 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  156 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC
Confidence            699999998731                          1223444432    3699999999887543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.4e-06  Score=75.22  Aligned_cols=102  Identities=25%  Similarity=0.433  Sum_probs=69.3

Q ss_pred             CCCEE-EEEcCCchHHHHHHH-HHHHCCCEEEEecCCHhHHHHH----HHcCCc-EE--EeCCC-ccHHHH---HHHHCC
Q 018013          229 SGKKV-LVTAAAGGTGQFAVQ-LAKLAGNTVVATCGGEHKAQLL----KELGVD-RV--INYKA-EDIKTV---FKEEFP  295 (362)
Q Consensus       229 ~g~~V-lI~ga~g~vG~~aiq-la~~~G~~Vi~~~~~~~~~~~l----~~~g~~-~v--~~~~~-~~~~~~---~~~~~~  295 (362)
                      .|++| ||+||++|+|.++++ +++..|++|+.++++.++.+.+    ++.+.. .+  .|..+ +++.+.   +.+.. 
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-   79 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   79 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-
Confidence            36667 899999999999875 5666799999999999887655    333443 22  34433 223222   22222 


Q ss_pred             CceeEEEECCChH--------------------------HHHHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGGD--------------------------MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +++|+++|++|-.                          ..+.++..|++.|++|.+++...
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~  141 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS  141 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence            4699999999820                          23345667788999999988644

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.18  E-value=2.5e-06  Score=74.37  Aligned_cols=108  Identities=23%  Similarity=0.281  Sum_probs=73.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEE---EeCCC-ccHHHHHHHHC--CCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRV---INYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      |+.+||+||++|+|.+.++.+...|++|+++++++++.+.+    ++.|....   .|..+ +++.+.+....  -+++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            67889999999999999999999999999999998877655    34565422   34333 33333333321  24699


Q ss_pred             EEEECCChH--------------------------HHHHHHHH---hc-cCCEEEEEcCcccccCCCC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKA---LA-VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~---l~-~~G~~v~~G~~~~~~~~~~  337 (362)
                      ++++|+|..                          ..+.+++.   .+ ..|++|.+++.....+...
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~  149 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH  149 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc
Confidence            999998831                          11233332   12 2489999998887666443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.18  E-value=5.1e-06  Score=72.77  Aligned_cols=106  Identities=20%  Similarity=0.356  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCC---cEEE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGV---DRVI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~---~~v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+. +++.   ...+  |..+ +++.+.+....  -+++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6899999999999999999999999999999999998887764 4432   2222  4333 33333333321  14699


Q ss_pred             EEEECCCh-------------H---------------HHHHHHHHhc--cCCEEEEEcCcccccC
Q 018013          300 IIYESVGG-------------D---------------MFNLCLKALA--VYGRLIVIGMISQYQG  334 (362)
Q Consensus       300 vvid~~g~-------------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~  334 (362)
                      ++++++|.             +               ..+.+++.|.  .+|++|.+++......
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~  149 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA  149 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC
T ss_pred             eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc
Confidence            99999872             0               2234566663  4589999988776554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.16  E-value=2.6e-06  Score=73.10  Aligned_cols=105  Identities=16%  Similarity=0.140  Sum_probs=70.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccH--------HHHHHHHCCCceeEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDI--------KTVFKEEFPKGFDII  301 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~--------~~~~~~~~~~g~Dvv  301 (362)
                      +.+|||+||++|+|.+.++.+...|++|+.+++++++.      .........+.+.        .........+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            45799999999999999999999999999999876532      1112221122111        111122234679999


Q ss_pred             EECCCh----H-----------------------HHHHHHHHhccCCEEEEEcCcccccCCCCCCC
Q 018013          302 YESVGG----D-----------------------MFNLCLKALAVYGRLIVIGMISQYQGEHGWQP  340 (362)
Q Consensus       302 id~~g~----~-----------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~  340 (362)
                      ++|+|.    .                       ..+.+++.|+++|++|.+++.....+...+..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~  141 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIG  141 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHH
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccc
Confidence            999872    1                       12356677889999999999887666544433

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.15  E-value=4.9e-06  Score=71.77  Aligned_cols=78  Identities=24%  Similarity=0.301  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcE-EEeCCC-ccHHHHHHHHC--CCceeEEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDR-VINYKA-EDIKTVFKEEF--PKGFDIIYE  303 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~-v~~~~~-~~~~~~~~~~~--~~g~Dvvid  303 (362)
                      +|++++|+||++|+|.++++.+...|++|+.+++++++.+.+. ++++.. ..|..+ +++.+.+....  -+++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            5899999999999999999999999999999999999887775 456543 234444 33333333321  146999999


Q ss_pred             CCC
Q 018013          304 SVG  306 (362)
Q Consensus       304 ~~g  306 (362)
                      |+|
T Consensus        84 nAG   86 (242)
T d1ulsa_          84 YAG   86 (242)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=3.5e-06  Score=72.88  Aligned_cols=102  Identities=28%  Similarity=0.401  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCc-EEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+ .+.. .+.|....+..+...... .++|+++++.|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~ag   83 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVAG   83 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEeccc
Confidence            68999999999999999999999999999999999988877765 3332 233433343334433333 46999999987


Q ss_pred             hH--------------------------HHHHHHHHh--ccCCEEEEEcCccc
Q 018013          307 GD--------------------------MFNLCLKAL--AVYGRLIVIGMISQ  331 (362)
Q Consensus       307 ~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~  331 (362)
                      ..                          ..+.+++.+  +.+|+++.+++...
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  136 (245)
T d2ag5a1          84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS  136 (245)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred             ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh
Confidence            31                          122334333  45689999987654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.14  E-value=1e-05  Score=69.58  Aligned_cols=103  Identities=24%  Similarity=0.314  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcEE---EeCCC-ccHHHHHHHHCC--CceeEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDRV---INYKA-EDIKTVFKEEFP--KGFDII  301 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~v---~~~~~-~~~~~~~~~~~~--~g~Dvv  301 (362)
                      .|+++||+||++++|.+.++-+...|++|+++.++.++.+.+ ++++....   .|..+ +++.+.+.....  +++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            689999999999999999999999999999999999887766 46776432   23333 334333333321  469999


Q ss_pred             EECCChH--------------------------HHHHHHHHhccCCEEEEEcCccc
Q 018013          302 YESVGGD--------------------------MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       302 id~~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ++++|..                          ..+..+..+..++.++.++..+.
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~  139 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  139 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccc
Confidence            9998731                          23355677888888887777654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.13  E-value=3.1e-06  Score=73.54  Aligned_cols=103  Identities=13%  Similarity=0.081  Sum_probs=71.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcC----CcEEEeCCCccHHHHHHHHC--CCceeEEEECC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELG----VDRVINYKAEDIKTVFKEEF--PKGFDIIYESV  305 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g----~~~v~~~~~~~~~~~~~~~~--~~g~Dvvid~~  305 (362)
                      ++||+||++|+|.++++.+...|++|++++++.++.+.++..+    ...+.+  .++..+.++...  -+++|++++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~--~~~~~~~~~~~~~~~G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMS--EQEPAELIEAVTSAYGQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECC--CCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCC--HHHHHHHHHHHHHHcCCCCEEEECC
Confidence            7899999999999999999999999999999888877775422    222222  234443333321  14699999987


Q ss_pred             Ch--H-------------------------HHHHHHHHhc--cCCEEEEEcCcccccCCC
Q 018013          306 GG--D-------------------------MFNLCLKALA--VYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       306 g~--~-------------------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~  336 (362)
                      |.  .                         ..+.+++.|+  .+|+||.+++.....+..
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~  139 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK  139 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc
Confidence            62  0                         1234555564  369999999988766543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.13  E-value=3.8e-06  Score=73.87  Aligned_cols=78  Identities=23%  Similarity=0.352  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc----EE--EeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD----RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~----~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      +|++++|+||++|+|.++++.+...|++|+++++++++.+.+.    +.|..    ..  .|..+ +++.+.+....  -
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999988876653    34431    22  34444 23333333322  1


Q ss_pred             CceeEEEECCC
Q 018013          296 KGFDIIYESVG  306 (362)
Q Consensus       296 ~g~Dvvid~~g  306 (362)
                      +++|++++++|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            46999999987

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.12  E-value=2.9e-06  Score=73.79  Aligned_cols=110  Identities=18%  Similarity=0.147  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCcE----EEeCC-C-ccHHHHHHHHC--CC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVDR----VINYK-A-EDIKTVFKEEF--PK  296 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~~----v~~~~-~-~~~~~~~~~~~--~~  296 (362)
                      +|++|||+||++|+|.+++..+...|++|+++.++.++.+.+.+    .+-..    ..|.. + .++.+.+....  -+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999876655444432    22221    22332 2 12333333221  14


Q ss_pred             ceeEEEECCCh---H---------------HHHHHHHHhc-----cCCEEEEEcCcccccCCCCC
Q 018013          297 GFDIIYESVGG---D---------------MFNLCLKALA-----VYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       297 g~Dvvid~~g~---~---------------~~~~~~~~l~-----~~G~~v~~G~~~~~~~~~~~  338 (362)
                      ++|++++|+|.   +               ..+.+++.|.     .+|++|.+++..+..+...+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~  148 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV  148 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC
Confidence            69999999994   1               2334555563     35899999998887665433

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.12  E-value=7.9e-06  Score=71.63  Aligned_cols=104  Identities=30%  Similarity=0.374  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHH----HHHcCCcEEE---eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQL----LKELGVDRVI---NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~----l~~~g~~~v~---~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +|+++||+||++|+|.+.++.+...|++|++++++ +++.+.    +++.|.+...   |..+ +++.+.++...  -++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999998776 443333    3456665332   3333 33333333321  146


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhccCCEEEEEcCcccc
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      +|+++++.|..                          ..+.+++.|.+.|+++.++.....
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~  157 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ  157 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccc
Confidence            99999998731                          345677888999999999876543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.10  E-value=5.3e-06  Score=72.04  Aligned_cols=107  Identities=19%  Similarity=0.189  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEEEe--CCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRVIN--YKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v~~--~~~-~~~~~~~~~~~--~~g  297 (362)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.++++..+.++    ..+....+.  ..+ +++.+.+....  -++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            689999999887  8999999999999999999998866554442    234334443  333 22333332221  146


Q ss_pred             eeEEEECCCh---H---------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGG---D---------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~---~---------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      +|++++++|.   .                           ..+.+...++++|++|.+++.......
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~  154 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV  154 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC
Confidence            9999999872   0                           111233456778999999988776554

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.09  E-value=6.4e-06  Score=71.73  Aligned_cols=103  Identities=27%  Similarity=0.387  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC-CHhHHHH----HHHcCCcEE-E--eCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG-GEHKAQL----LKELGVDRV-I--NYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~-~~~~~~~----l~~~g~~~v-~--~~~~-~~~~~~~~~~~--~~g  297 (362)
                      .|+++||+||++|+|.+.++.+...|++|+++.+ ++++.+.    +++.|.... +  |..+ +++.+.+....  -++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999998754 4444443    345676532 3  3333 22333232221  146


Q ss_pred             eeEEEECCChH--------------------------HHHHHHHHhccCCEEEEEcCccc
Q 018013          298 FDIIYESVGGD--------------------------MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       298 ~Dvvid~~g~~--------------------------~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|++++++|..                          ..+.+++.|+++|+++.+.....
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~  144 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA  144 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccc
Confidence            99999999831                          34567788899999988877654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.04  E-value=2.8e-05  Score=64.22  Aligned_cols=81  Identities=25%  Similarity=0.247  Sum_probs=59.1

Q ss_pred             HHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-----cCC-cEEEeCCCccHHHHHHHHCC
Q 018013          223 EQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-----LGV-DRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       223 ~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-----~g~-~~v~~~~~~~~~~~~~~~~~  295 (362)
                      ..... =+|++++|+||+|++|..+++.+...|++|++++++.++.+.+.+     ... ....|..+.+   .+++.. 
T Consensus        15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~-   90 (191)
T d1luaa1          15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA---SRAEAV-   90 (191)
T ss_dssp             HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHH---HHHHHT-
T ss_pred             HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHH---HHHHHh-
Confidence            44444 689999999999999999999999999999999999988876642     222 2344544422   122222 


Q ss_pred             CceeEEEECCCh
Q 018013          296 KGFDIIYESVGG  307 (362)
Q Consensus       296 ~g~Dvvid~~g~  307 (362)
                      +++|++|+|.|.
T Consensus        91 ~~iDilin~Ag~  102 (191)
T d1luaa1          91 KGAHFVFTAGAI  102 (191)
T ss_dssp             TTCSEEEECCCT
T ss_pred             cCcCeeeecCcc
Confidence            469999999873

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.02  E-value=7.5e-06  Score=71.80  Aligned_cols=78  Identities=19%  Similarity=0.328  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc------EEEeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD------RVINYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~------~v~~~~~-~~~~~~~~~~~--~  295 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+.    +.+..      ...|..+ +++.+.+....  -
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999999998877653    33321      2234433 23333333322  1


Q ss_pred             CceeEEEECCC
Q 018013          296 KGFDIIYESVG  306 (362)
Q Consensus       296 ~g~Dvvid~~g  306 (362)
                      +++|++++++|
T Consensus        84 g~iDilvnnAG   94 (272)
T d1xkqa_          84 GKIDVLVNNAG   94 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeCCc
Confidence            46999999987

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.02  E-value=5.8e-06  Score=71.20  Aligned_cols=108  Identities=12%  Similarity=0.140  Sum_probs=73.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCE-------EEEecCCHhHHHHHH----HcCCcE-E--EeCCC-ccHHHHHHHHC-
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNT-------VVATCGGEHKAQLLK----ELGVDR-V--INYKA-EDIKTVFKEEF-  294 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~-------Vi~~~~~~~~~~~l~----~~g~~~-v--~~~~~-~~~~~~~~~~~-  294 (362)
                      +.|||+||++|+|.++++.+...|++       |+.+++++++.+.+.    +.|... .  .|..+ +++.+.++... 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35799999999999999888888987       899999988877653    345432 2  24443 33333333321 


Q ss_pred             -CCceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCCCC
Q 018013          295 -PKGFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEHGW  338 (362)
Q Consensus       295 -~~g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~~  338 (362)
                       -+++|++++++|.           +               ..+.+++.|+  .+|++|.+++.....+....
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~  154 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS  154 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCC
Confidence             2469999999883           1               2345666674  46899999998887665433

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.01  E-value=5.2e-06  Score=71.68  Aligned_cols=105  Identities=20%  Similarity=0.266  Sum_probs=70.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEec-CCHhHHHHH----HHcCCcE-EE--eCCC-ccHHHHHHHHC--CCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATC-GGEHKAQLL----KELGVDR-VI--NYKA-EDIKTVFKEEF--PKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~-~~~~~~~~l----~~~g~~~-v~--~~~~-~~~~~~~~~~~--~~g~D  299 (362)
                      ..+||+||++|+|.++++.+...|++|++++ +++++.+.+    ++.|... .+  |..+ +++.+.+....  -+++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999998875 455555544    3456542 22  3333 23333333321  24699


Q ss_pred             EEEECCChH--------------------------HHHHHHHHh--ccCCEEEEEcCcccccCC
Q 018013          300 IIYESVGGD--------------------------MFNLCLKAL--AVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       300 vvid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~G~~~~~~~~  335 (362)
                      ++++++|..                          ..+.+++.|  +.+|+||.+++.....+.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~  145 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN  145 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC
Confidence            999998831                          234566666  457999999998876554

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.99  E-value=7.2e-06  Score=71.59  Aligned_cols=78  Identities=17%  Similarity=0.270  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc----EE--EeCCC-ccHHHHHHHHC--C
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD----RV--INYKA-EDIKTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~----~v--~~~~~-~~~~~~~~~~~--~  295 (362)
                      +|+.+||+||++|+|.++++.+...|++|+++++++++.+.+.    +.+..    +.  .|..+ +++.+.+....  -
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999988876653    33321    22  34433 23333333322  1


Q ss_pred             CceeEEEECCC
Q 018013          296 KGFDIIYESVG  306 (362)
Q Consensus       296 ~g~Dvvid~~g  306 (362)
                      +++|++++|+|
T Consensus        84 g~iDilvnnAG   94 (264)
T d1spxa_          84 GKLDILVNNAG   94 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEeecccc
Confidence            46999999987

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.99  E-value=1.5e-05  Score=69.05  Aligned_cols=106  Identities=20%  Similarity=0.245  Sum_probs=70.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEE---EeCCC-ccHHHHHHHHC--CCceeE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRV---INYKA-EDIKTVFKEEF--PKGFDI  300 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g~Dv  300 (362)
                      +.+||+||++|+|.+.++.+...|++|+++++++++.+.+    ++.|....   .|..+ +++.+.+....  -+++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4569999999999999988888999999999998887665    34555422   24333 22333333321  246999


Q ss_pred             EEECCCh-----------H---------------HHHHHHHHh---ccCCEEEEEcCcccccCCC
Q 018013          301 IYESVGG-----------D---------------MFNLCLKAL---AVYGRLIVIGMISQYQGEH  336 (362)
Q Consensus       301 vid~~g~-----------~---------------~~~~~~~~l---~~~G~~v~~G~~~~~~~~~  336 (362)
                      +++|+|.           +               ..+.+++.+   ..+|+++.+++.....+..
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~  146 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP  146 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc
Confidence            9999872           1               122344432   2457899999887765543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.97  E-value=2.2e-06  Score=73.85  Aligned_cols=103  Identities=20%  Similarity=0.301  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHC--CCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEF--PKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~--~~g~Dvvid~~  305 (362)
                      .|+++||+||++|+|.++++.+...|++|+++.+++++.+.+.    ....|..+ +++.+.+....  -+++|++++|+
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   81 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   81 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce----EEEEecCCHHHHHHHHHHHHHhcCCceEEEeee
Confidence            6899999999999999999999999999999999876543221    12234444 22333333322  14699999998


Q ss_pred             Ch-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCC
Q 018013          306 GG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGE  335 (362)
Q Consensus       306 g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~  335 (362)
                      |.           +               ..+.+++.+.  .+|+||.+++.....+.
T Consensus        82 G~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~  139 (237)
T d1uzma1          82 GLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI  139 (237)
T ss_dssp             SCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----
T ss_pred             cccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC
Confidence            83           1               1223444443  45799999998876554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.82  E-value=2.9e-05  Score=62.12  Aligned_cols=97  Identities=15%  Similarity=0.122  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +..+|+|.| +|-+|+.+++.|+.+|++|.+.+.+.+++++++.....  .......+.+.+.+.     ..|+||.++=
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-----~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-----EADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-----TCSEEEECCC
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhc-----cCcEEEEeee
Confidence            467899999 79999999999999999999999999999999864332  333344344444443     4899999864


Q ss_pred             --h-----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          307 --G-----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       307 --~-----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                        +     -.-+..++.|++|..+|++..-.+
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqG  136 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQG  136 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeecCCC
Confidence              2     135688999999999999977444

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.74  E-value=3e-05  Score=67.32  Aligned_cols=78  Identities=18%  Similarity=0.208  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-----HHcCCcEE---EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-----KELGVDRV---INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-----~~~g~~~v---~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+     ++.|....   .|..+ +++.+.++...  -++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999987765443     34565422   34433 33333333321  246


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++++|+|
T Consensus        88 iDilVnnAg   96 (260)
T d1h5qa_          88 ISGLIANAG   96 (260)
T ss_dssp             EEEEEECCC
T ss_pred             CcEeccccc
Confidence            999999987

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=8.2e-05  Score=61.84  Aligned_cols=102  Identities=18%  Similarity=0.095  Sum_probs=70.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      .++|+|+||+|.+|..++..+...|.+|.+++++.++.......++. ++..+-.+..+..+..  .++|+||.++|.. 
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d~~~l~~al--~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTV--AGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHH--TTCSEEEECCCCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccc-cccccccchhhHHHHh--cCCCEEEEEeccCC
Confidence            57899999999999999998888999999999998876544444443 3333333333332223  3589999998731 


Q ss_pred             ----------HHHHHHHHhccCC--EEEEEcCcccccC
Q 018013          309 ----------MFNLCLKALAVYG--RLIVIGMISQYQG  334 (362)
Q Consensus       309 ----------~~~~~~~~l~~~G--~~v~~G~~~~~~~  334 (362)
                                .....++.++..|  +||.++....+..
T Consensus        80 ~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~  117 (205)
T d1hdoa_          80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWD  117 (205)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred             chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCC
Confidence                      2334555565544  8999887665444

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.72  E-value=5.1e-05  Score=66.96  Aligned_cols=78  Identities=15%  Similarity=0.213  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-----HcCCc-EEE--eCCC-ccHHHHHHHH--CCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-----ELGVD-RVI--NYKA-EDIKTVFKEE--FPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-----~~g~~-~v~--~~~~-~~~~~~~~~~--~~~g  297 (362)
                      +|+++||+||++|+|.++++.+...|++|++++++.++.+.+.     +.|.. ..+  |..+ +++.+.+...  ..++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            5799999999999999999999999999999999988765442     34544 233  3333 2222222222  2357


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|++++++|
T Consensus       104 iDilvnnAg  112 (294)
T d1w6ua_         104 PNIVINNAA  112 (294)
T ss_dssp             CSEEEECCC
T ss_pred             cchhhhhhh
Confidence            999999988

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=7.3e-05  Score=64.68  Aligned_cols=110  Identities=16%  Similarity=0.226  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCchHHHHHHH-HHH--HCCCEEEEecCCHhHHHHHHH----c--CCc-EE--EeCCC-ccHHHHHH---H
Q 018013          229 SGKKVLVTAAAGGTGQFAVQ-LAK--LAGNTVVATCGGEHKAQLLKE----L--GVD-RV--INYKA-EDIKTVFK---E  292 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiq-la~--~~G~~Vi~~~~~~~~~~~l~~----~--g~~-~v--~~~~~-~~~~~~~~---~  292 (362)
                      .|+.++|+||++|+|.++++ +|+  ..|++|+++++++++.+.+.+    .  +.. ..  .|..+ +++.+.+.   +
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            57899999999999998775 455  369999999999998877632    2  222 12  23333 22333322   2


Q ss_pred             H---CCCceeEEEECCCh--------------H---------------HHHHHHHHhcc----CCEEEEEcCcccccCCC
Q 018013          293 E---FPKGFDIIYESVGG--------------D---------------MFNLCLKALAV----YGRLIVIGMISQYQGEH  336 (362)
Q Consensus       293 ~---~~~g~Dvvid~~g~--------------~---------------~~~~~~~~l~~----~G~~v~~G~~~~~~~~~  336 (362)
                      .   .+..+|+++++.|.              +               ..+.+++.|++    .|++|.+++.....+..
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~  164 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK  164 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCc
Confidence            2   13468999998651              1               22345566654    36999999988766644


Q ss_pred             CC
Q 018013          337 GW  338 (362)
Q Consensus       337 ~~  338 (362)
                      .+
T Consensus       165 ~~  166 (259)
T d1oaaa_         165 GW  166 (259)
T ss_dssp             TC
T ss_pred             cc
Confidence            33

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=6.5e-05  Score=66.49  Aligned_cols=78  Identities=21%  Similarity=0.291  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-Hc--------CCcEE---EeCCC-ccHHHHHHHHC-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-EL--------GVDRV---INYKA-EDIKTVFKEEF-  294 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~--------g~~~v---~~~~~-~~~~~~~~~~~-  294 (362)
                      +|+++||+||++|+|.++++.+...|++|++++++.++.+.+. ++        +...+   .|..+ +++.+.++... 
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999988776542 21        22222   23333 33333333321 


Q ss_pred             -CCceeEEEECCC
Q 018013          295 -PKGFDIIYESVG  306 (362)
Q Consensus       295 -~~g~Dvvid~~g  306 (362)
                       -+++|++++++|
T Consensus        91 ~~G~iDiLVnnAg  103 (297)
T d1yxma1          91 TFGKINFLVNNGG  103 (297)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HhCCeEEEEeecc
Confidence             146999999987

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=0.00011  Score=63.38  Aligned_cols=107  Identities=24%  Similarity=0.297  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEEEeCCCcc---HHHHHHHH--CCCc
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRVINYKAED---IKTVFKEE--FPKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~---~~~~~~~~--~~~g  297 (362)
                      .|+++||+||+|  |+|.+++..+...|++|+.+.++++..+.+.    ..+....+.....+   ........  ....
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            589999999988  7999999999999999999999866555443    34444333333222   22222222  2356


Q ss_pred             eeEEEECCChH-------------------------------HHHHHHHHhccCCEEEEEcCcccccCC
Q 018013          298 FDIIYESVGGD-------------------------------MFNLCLKALAVYGRLIVIGMISQYQGE  335 (362)
Q Consensus       298 ~Dvvid~~g~~-------------------------------~~~~~~~~l~~~G~~v~~G~~~~~~~~  335 (362)
                      .|+.+++++..                               ..+.+...+++++.++.++......+.
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~  152 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI  152 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC
Confidence            89999987520                               111233445778888888887665543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=5.2e-05  Score=66.73  Aligned_cols=107  Identities=17%  Similarity=0.185  Sum_probs=67.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEE---EecCCHhHHHH----HHHc---CCc-EE--EeCCC-ccHHHHHHHHCCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVV---ATCGGEHKAQL----LKEL---GVD-RV--INYKA-EDIKTVFKEEFPK  296 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi---~~~~~~~~~~~----l~~~---g~~-~v--~~~~~-~~~~~~~~~~~~~  296 (362)
                      +.|||+||++|+|.+++..+...|++|+   .+.++.++.+.    ++++   +.. ..  .|..+ +++.+.+.....+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            4578999999999999999888998744   44444333322    2332   322 22  34444 3344444444456


Q ss_pred             ceeEEEECCCh-----------H---------------HHHHHHHHhc--cCCEEEEEcCcccccCCCC
Q 018013          297 GFDIIYESVGG-----------D---------------MFNLCLKALA--VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       297 g~Dvvid~~g~-----------~---------------~~~~~~~~l~--~~G~~v~~G~~~~~~~~~~  337 (362)
                      .+|+++++.|.           +               ..+.++..|.  .+|++|.+++..+..+...
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~  151 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF  151 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC
Confidence            79999999872           1               2334556663  3699999999887666443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=6.1e-05  Score=64.70  Aligned_cols=48  Identities=21%  Similarity=0.200  Sum_probs=42.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCc
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVD  276 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~  276 (362)
                      +|+++||+||++|+|.++++.+...|++|+++++++++.+.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998877766 456654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.63  E-value=4.7e-05  Score=65.56  Aligned_cols=77  Identities=26%  Similarity=0.305  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCC-c-EEE--eCCC-ccHHH---HHHHHC-CCce
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGV-D-RVI--NYKA-EDIKT---VFKEEF-PKGF  298 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~-~-~v~--~~~~-~~~~~---~~~~~~-~~g~  298 (362)
                      .++|||+||++|+|.++++.+...|+  +|+.++++.++.+.+++... . +++  |..+ +++.+   .+.+.. ..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            58999999999999999988877886  79999999999888876432 2 233  4333 22322   222222 3469


Q ss_pred             eEEEECCC
Q 018013          299 DIIYESVG  306 (362)
Q Consensus       299 Dvvid~~g  306 (362)
                      |++++|+|
T Consensus        83 dilinnAG   90 (250)
T d1yo6a1          83 SLLINNAG   90 (250)
T ss_dssp             CEEEECCC
T ss_pred             EEEEEcCc
Confidence            99999988

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.63  E-value=0.00011  Score=59.61  Aligned_cols=102  Identities=19%  Similarity=0.128  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEe-CC-C------------------ccHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN-YK-A------------------EDIKT  288 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~-~~-~------------------~~~~~  288 (362)
                      +.-+|+|.| +|-+|+.++..|+.+|++|.+.+.+.++++.+++++..++.- .. .                  ....+
T Consensus        28 ~pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            456899999 799999999999999999999999999999999988755411 00 0                  01112


Q ss_pred             HHHHHCCCceeEEEECCC--h-----HHHHHHHHHhccCCEEEEEcCcccc
Q 018013          289 VFKEEFPKGFDIIYESVG--G-----DMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       289 ~~~~~~~~g~Dvvid~~g--~-----~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      .+.+.. ...|+||-++=  +     -.-+..++.|++|..+|++..-.+.
T Consensus       107 ~l~~~l-~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGG  156 (183)
T d1l7da1         107 AVLKEL-VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGG  156 (183)
T ss_dssp             HHHHHH-TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTC
T ss_pred             HHHHHH-HhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCC
Confidence            222211 35899999863  2     1456889999999999999775443

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.57  E-value=0.00032  Score=60.76  Aligned_cols=105  Identities=23%  Similarity=0.303  Sum_probs=74.4

Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHH----HcCCc--EEEeCCCccHH
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLK----ELGVD--RVINYKAEDIK  287 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~----~~g~~--~v~~~~~~~~~  287 (362)
                      -.+.+.+..+..+||++||=.| + |.|..+..+|+..|  .+|+.++.+++..+.++    .+|..  ..+...+  +.
T Consensus        90 kd~~~Ii~~l~i~pG~~VLDiG-~-GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d--~~  165 (266)
T d1o54a_          90 KDSSFIAMMLDVKEGDRIIDTG-V-GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--IS  165 (266)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEEC-C-TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--GG
T ss_pred             HHHHHHHHhhCCCCCCEEEECC-C-CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc--cc
Confidence            3444556667779999999998 3 44777888898875  69999999999887775    35542  2222222  11


Q ss_pred             HHHHHHCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEc
Q 018013          288 TVFKEEFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       288 ~~~~~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G  327 (362)
                         .......+|.|+--...  ..++.+.++|++||+++.+-
T Consensus       166 ---~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         166 ---EGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             ---GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ---ccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence               11233568988877764  68899999999999998764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.52  E-value=0.00029  Score=60.29  Aligned_cols=76  Identities=16%  Similarity=0.369  Sum_probs=52.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHH---HCCCEEEEecCCHhHHHHHHH---cCCc-EE--EeCCC-ccHHHHHHH---H-CCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAK---LAGNTVVATCGGEHKAQLLKE---LGVD-RV--INYKA-EDIKTVFKE---E-FPK  296 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~---~~G~~Vi~~~~~~~~~~~l~~---~g~~-~v--~~~~~-~~~~~~~~~---~-~~~  296 (362)
                      ++|||+||++|+|.++++.+.   ..|++|+++++++++.+.+++   .+.. .+  +|..+ +++.+.+..   . ..+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            689999999999999886553   468999999999887666543   2322 22  34444 344444332   2 235


Q ss_pred             ceeEEEECCC
Q 018013          297 GFDIIYESVG  306 (362)
Q Consensus       297 g~Dvvid~~g  306 (362)
                      ++|+++++.|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            6999999987

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00082  Score=53.96  Aligned_cols=77  Identities=19%  Similarity=0.232  Sum_probs=56.8

Q ss_pred             HHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-c---CCcEEEeCCCccHHHHHHHHC
Q 018013          220 IALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-L---GVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       220 ~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~---g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      .+|++... .+|++|+|.| +||.+.+++..+...|++|+++.|+.+|.+.+.+ +   +....++..  +       ..
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--~-------~~   76 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD--E-------LE   76 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG--G-------GT
T ss_pred             HHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc--c-------cc
Confidence            45666665 7899999999 7999999999999999999999999998877753 2   221222211  1       12


Q ss_pred             CCceeEEEECCC
Q 018013          295 PKGFDIIYESVG  306 (362)
Q Consensus       295 ~~g~Dvvid~~g  306 (362)
                      ...+|+++||+.
T Consensus        77 ~~~~dliIN~Tp   88 (170)
T d1nyta1          77 GHEFDLIINATS   88 (170)
T ss_dssp             TCCCSEEEECCS
T ss_pred             ccccceeecccc
Confidence            346899999986

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.27  E-value=0.00083  Score=53.79  Aligned_cols=74  Identities=22%  Similarity=0.204  Sum_probs=55.8

Q ss_pred             HHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHH-HcCCcEEEeCCCccHHHHHHHHCCCc
Q 018013          220 IALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       220 ~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      ..|++....++++|+|.| +||.+.+++..++..|+ +++++.|+.+|.+.+. .++... ++...           ...
T Consensus         7 ~~l~~~~~~~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~-----------~~~   73 (167)
T d1npya1           7 KLIEKYHLNKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE-----------NQQ   73 (167)
T ss_dssp             HHHHHTTCCTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT-----------TCC
T ss_pred             HHHHHcCCCCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc-----------ccc
Confidence            345555556788999999 79999999999999997 8999999999988875 455433 22111           135


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|+++||+.
T Consensus        74 ~DliINaTp   82 (167)
T d1npya1          74 ADILVNVTS   82 (167)
T ss_dssp             CSEEEECSS
T ss_pred             hhhheeccc
Confidence            899999975

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.24  E-value=0.0032  Score=49.75  Aligned_cols=101  Identities=19%  Similarity=0.252  Sum_probs=69.2

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHH-HHcCCcEEEeCCCccHHHHHHHHCCCceeE
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l-~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +....-.+++|||.| +|.+|..+++.+...|+ +++++.++.+|.+.+ +++|.. +.++  +++.+.+     ..+|+
T Consensus        17 ~~~~~l~~~~ilviG-aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~--~~~~~~l-----~~~Di   87 (159)
T d1gpja2          17 RELGSLHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHL-----ARSDV   87 (159)
T ss_dssp             HHHSCCTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHH-----HTCSE
T ss_pred             HHhCCcccCeEEEEC-CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc--hhHHHHh-----ccCCE
Confidence            344446889999999 59999999999998998 799999998887655 567753 3332  2333333     24899


Q ss_pred             EEECCCh-------HHHHHHHHHhccCC--EEEEEcCcccc
Q 018013          301 IYESVGG-------DMFNLCLKALAVYG--RLIVIGMISQY  332 (362)
Q Consensus       301 vid~~g~-------~~~~~~~~~l~~~G--~~v~~G~~~~~  332 (362)
                      ||.|++.       +.++..++.-..+.  .|+.++.+..-
T Consensus        88 vi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~v  128 (159)
T d1gpja2          88 VVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDV  128 (159)
T ss_dssp             EEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSB
T ss_pred             EEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCCCc
Confidence            9999984       23444333323333  68888877543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.17  E-value=0.00023  Score=59.67  Aligned_cols=100  Identities=20%  Similarity=0.255  Sum_probs=69.3

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH----HHcCCcEEE-eCCCccHHHHHHHHCC
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL----KELGVDRVI-NYKAEDIKTVFKEEFP  295 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l----~~~g~~~v~-~~~~~~~~~~~~~~~~  295 (362)
                      .|+.+..++|++||..|  +|.|..++.+++..|.+|+++..+++-.+.+    +++|.+.+. ...+..  +-.  ...
T Consensus        70 ml~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~--~g~--~~~  143 (215)
T d1jg1a_          70 MLEIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS--KGF--PPK  143 (215)
T ss_dssp             HHHHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG--GCC--GGG
T ss_pred             HHHhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccc--cCC--ccc
Confidence            35555669999999998  5678888899998898899999987765555    357765332 222110  000  112


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEE
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~  326 (362)
                      ..+|.|+-+.+- ..-+..++.|++||++|..
T Consensus       144 ~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         144 APYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             CcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            569999877663 4446778999999999874

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.16  E-value=0.00043  Score=59.96  Aligned_cols=78  Identities=22%  Similarity=0.174  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhHHHH---HHHcCC-cEE--EeCCC-ccHHHHHHHHC--CCc
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHKAQL---LKELGV-DRV--INYKA-EDIKTVFKEEF--PKG  297 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~~~~---l~~~g~-~~v--~~~~~-~~~~~~~~~~~--~~g  297 (362)
                      +|+++||+||+|  |+|.++++.+...|++|+++.++++..+.   +.+.+. ..+  .|..+ .+..+.+....  -+.
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            589999999876  89999999999999999999998643333   333332 222  23333 22333332221  256


Q ss_pred             eeEEEECCC
Q 018013          298 FDIIYESVG  306 (362)
Q Consensus       298 ~Dvvid~~g  306 (362)
                      +|+++++.|
T Consensus        84 id~lV~nag   92 (274)
T d2pd4a1          84 LDFIVHSVA   92 (274)
T ss_dssp             EEEEEECCC
T ss_pred             CCeEEeecc
Confidence            999999987

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.15  E-value=0.00087  Score=57.46  Aligned_cols=110  Identities=13%  Similarity=0.186  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhH-------HHHHHHcCCcEE---EeCCC-ccHHHHHHHHC-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHK-------AQLLKELGVDRV---INYKA-EDIKTVFKEEF-  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~-------~~~l~~~g~~~v---~~~~~-~~~~~~~~~~~-  294 (362)
                      +|+.++||+||++|+|+++++.+...|+ +|+.+.++..+       .+.+++.|....   .|..+ +++.+.+.... 
T Consensus         7 ~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence            8999999999999999999988888898 57777665322       233345676432   23333 22333333322 


Q ss_pred             CCceeEEEECCCh-----------HHHH-----------HHHHHhc--cCCEEEEEcCcccccCCCC
Q 018013          295 PKGFDIIYESVGG-----------DMFN-----------LCLKALA--VYGRLIVIGMISQYQGEHG  337 (362)
Q Consensus       295 ~~g~Dvvid~~g~-----------~~~~-----------~~~~~l~--~~G~~v~~G~~~~~~~~~~  337 (362)
                      ..++|.++++.|.           +.++           .+.+.+.  +.|+||.+++.....+...
T Consensus        87 ~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~  153 (259)
T d2fr1a1          87 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG  153 (259)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT
T ss_pred             cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc
Confidence            2469999999883           1111           1223333  4689999998877655433

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.04  E-value=0.0037  Score=53.68  Aligned_cols=106  Identities=16%  Similarity=0.186  Sum_probs=72.7

Q ss_pred             HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----c--C-Cc-EEEeCCCcc
Q 018013          216 LTASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----L--G-VD-RVINYKAED  285 (362)
Q Consensus       216 ~tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~--g-~~-~v~~~~~~~  285 (362)
                      .-+-+.+..+..+||++||=.|  .|.|.++..+|+..|  .+|+.++.+++..+.+++    +  + .+ ..+...+  
T Consensus        83 kD~s~Ii~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d--  158 (264)
T d1i9ga_          83 KDAAQIVHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD--  158 (264)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC--
T ss_pred             HHHHHHHHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc--
Confidence            3344455666669999999988  456888889999876  499999999988887753    2  1 22 2222221  


Q ss_pred             HHHHHHHHCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEc
Q 018013          286 IKTVFKEEFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       286 ~~~~~~~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +.+  .......+|.||-....  +.+..+.+.|+++|+++.+-
T Consensus       159 ~~~--~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         159 LAD--SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             GGG--CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ccc--ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            110  00123569987766654  68899999999999998763

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.00057  Score=57.11  Aligned_cols=98  Identities=27%  Similarity=0.364  Sum_probs=67.2

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCCcEE--EeCCCccHHHHHHH
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGVDRV--INYKAEDIKTVFKE  292 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~~~v--~~~~~~~~~~~~~~  292 (362)
                      .+..+..++|++||-.|  .|.|..++.+|+..|  .+|++++.+++..+.+++    .+.+.+  +..+..+   ..  
T Consensus        67 ~l~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~---~~--  139 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY---GV--  139 (213)
T ss_dssp             HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---CC--
T ss_pred             HHHhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH---cc--
Confidence            34555569999999999  344888888998876  489999999887777753    455422  2211111   00  


Q ss_pred             HCCCceeEEEECCCh-HHHHHHHHHhccCCEEEE
Q 018013          293 EFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       293 ~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~  325 (362)
                      .....+|+|+.+.+- ...+..++.|++||++|.
T Consensus       140 ~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~  173 (213)
T d1dl5a1         140 PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIV  173 (213)
T ss_dssp             GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEE
T ss_pred             ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEE
Confidence            112459999987763 444678899999999987

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.90  E-value=0.0058  Score=48.87  Aligned_cols=89  Identities=18%  Similarity=0.119  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEe--------CC--CccHHHHHHHHCCCcee
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVIN--------YK--AEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~--------~~--~~~~~~~~~~~~~~g~D  299 (362)
                      .+++.|+| +|.+|.+++..+...|.+|+++++++++.+.+++.+......        ..  ..+..+.+     ...|
T Consensus         1 sk~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD   74 (184)
T d1bg6a2           1 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDAD   74 (184)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCS
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCC
Confidence            47899999 699999999999999999999999999999888765422111        10  12333333     3589


Q ss_pred             EEEECCChHHHHHHHHH----hccCCEEE
Q 018013          300 IIYESVGGDMFNLCLKA----LAVYGRLI  324 (362)
Q Consensus       300 vvid~~g~~~~~~~~~~----l~~~G~~v  324 (362)
                      ++|-++........++.    +.++-.++
T Consensus        75 ~iii~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             EEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence            99999987555555444    44444444

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0021  Score=56.97  Aligned_cols=106  Identities=18%  Similarity=0.182  Sum_probs=68.2

Q ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHH----cC-----------CcE--
Q 018013          217 TASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKE----LG-----------VDR--  277 (362)
Q Consensus       217 tA~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~----~g-----------~~~--  277 (362)
                      -+-+.+..+..+||++||=.| + |.|.++..+|+..|.  +|+.++.+++..+.+++    ++           .+.  
T Consensus        86 D~~~Il~~l~i~pG~rVLE~G-t-GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~  163 (324)
T d2b25a1          86 DINMILSMMDINPGDTVLEAG-S-GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD  163 (324)
T ss_dssp             HHHHHHHHHTCCTTCEEEEEC-C-TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred             cHHHHHHHhCCCCCCEEEEec-c-cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhcccccee
Confidence            344556667779999999888 3 558889999998774  89999999888777643    11           111  


Q ss_pred             EEeCCCccHHHHHHHHCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEc
Q 018013          278 VINYKAEDIKTVFKEEFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       278 v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +...+-.+..   .......+|.||--...  +.+..+.+.|++||+++.+-
T Consensus       164 ~~~~di~~~~---~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         164 FIHKDISGAT---EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             EEESCTTCCC----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             EEecchhhcc---cccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            1111111110   11123458887754443  57889999999999999763

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.84  E-value=0.00061  Score=58.32  Aligned_cols=101  Identities=11%  Similarity=0.115  Sum_probs=67.3

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cC-CcEE-EeCCCccHHHHHHH
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LG-VDRV-INYKAEDIKTVFKE  292 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g-~~~v-~~~~~~~~~~~~~~  292 (362)
                      .+..+..+||++||=.|+  |.|..+..+|+..|  .+|++++.+++..+.+++    ++ ...+ +...  ++.+.   
T Consensus        77 Ii~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~--Di~~~---  149 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS--DIADF---  149 (250)
T ss_dssp             ----CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS--CTTTC---
T ss_pred             HHHHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe--eeecc---
Confidence            455566699999999983  44677778888765  489999999988887754    22 2221 1111  21111   


Q ss_pred             HCCCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcC
Q 018013          293 EFPKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       293 ~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      .....+|.|+-....  +.++.+.+.|++||+++.+..
T Consensus       150 ~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         150 ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             cccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence            224569999866553  688999999999999997633

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.70  E-value=0.0027  Score=54.24  Aligned_cols=35  Identities=17%  Similarity=0.122  Sum_probs=31.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK  266 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~  266 (362)
                      +.||+||++|+|.+.++.+...|++|+.+.++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            57999999999999999999999999999987554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.69  E-value=0.0033  Score=55.80  Aligned_cols=39  Identities=5%  Similarity=-0.089  Sum_probs=32.4

Q ss_pred             CCEEEEEcC--CchHHHHHHHHHHHCCCEEEEecCCHhHHH
Q 018013          230 GKKVLVTAA--AGGTGQFAVQLAKLAGNTVVATCGGEHKAQ  268 (362)
Q Consensus       230 g~~VlI~ga--~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~  268 (362)
                      ++..||+|+  +.|+|.+.++.+...|++|+.+.++.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            578899994  469999999999999999999987665443

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.65  E-value=0.0028  Score=54.17  Aligned_cols=95  Identities=19%  Similarity=0.240  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      ++|++||=.| +| .|..++.++ ..|++|++++.++.-.+.+++    .|.. .++..   ++.+.   ...+.+|+|+
T Consensus       119 ~~g~~VLDiG-cG-sG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d~~~~---~~~~~fD~V~  189 (254)
T d2nxca1         119 RPGDKVLDLG-TG-SGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAA---LPFGPFDLLV  189 (254)
T ss_dssp             CTTCEEEEET-CT-TSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHH---GGGCCEEEEE
T ss_pred             CccCEEEEcc-cc-hhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---ccccc---ccccccchhh
Confidence            7899999988 33 355566555 468999999999988877753    4553 33322   22222   2235799999


Q ss_pred             ECCCh----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          303 ESVGG----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       303 d~~g~----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .+...    +.++.+.+.|+|||+++..|....
T Consensus       190 ani~~~~l~~l~~~~~~~LkpGG~lilSgil~~  222 (254)
T d2nxca1         190 ANLYAELHAALAPRYREALVPGGRALLTGILKD  222 (254)
T ss_dssp             EECCHHHHHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred             hccccccHHHHHHHHHHhcCCCcEEEEEecchh
Confidence            77653    456678889999999998776543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.60  E-value=0.0019  Score=54.21  Aligned_cols=97  Identities=19%  Similarity=0.185  Sum_probs=65.6

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcC--Cc--EEEeCCC-ccHHHHHHHHCC
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELG--VD--RVINYKA-EDIKTVFKEEFP  295 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g--~~--~v~~~~~-~~~~~~~~~~~~  295 (362)
                      .|..+..++|++||-.|  .|.|..++.+|+. +.+|+.+..+++-.+.+++.-  ..  .++..+. ..+.      ..
T Consensus        62 ml~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~------~~  132 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE------EE  132 (224)
T ss_dssp             HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG------GG
T ss_pred             HHHHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcch------hh
Confidence            34555559999999999  3567777778876 679999999988888776521  11  2222221 1111      12


Q ss_pred             CceeEEEECCCh-HHHHHHHHHhccCCEEEEE
Q 018013          296 KGFDIIYESVGG-DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       296 ~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~  326 (362)
                      ..+|+|+-+.+- ...+..++.|++||++|..
T Consensus       133 ~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         133 KPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            459998876553 4456678999999999885

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.59  E-value=0.0074  Score=47.61  Aligned_cols=86  Identities=13%  Similarity=0.035  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC-cEEEeCCCccHHHHHHHHCCCceeEEEECCChHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV-DRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF  310 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~-~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~  310 (362)
                      +|.|+| .|.+|...+..++..|.+|++.++++++.+.+++.|. +...+..+ .         -...|+||-|+..+..
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~-~---------~~~~DiIilavp~~~~   70 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLS-L---------LQTAKIIFLCTPIQLI   70 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGG-G---------GTTCSEEEECSCHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecc-c---------ccccccccccCcHhhh
Confidence            588998 7999999998889999999999999999998888875 44433211 0         1346777777764333


Q ss_pred             HHHH----HHhccCCEEEEEcC
Q 018013          311 NLCL----KALAVYGRLIVIGM  328 (362)
Q Consensus       311 ~~~~----~~l~~~G~~v~~G~  328 (362)
                      ...+    ..+.++-.++.++.
T Consensus        71 ~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          71 LPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHHHHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhhhhhcccccceeeccc
Confidence            3333    33444555555543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0094  Score=46.93  Aligned_cols=103  Identities=17%  Similarity=0.166  Sum_probs=75.4

Q ss_pred             HHHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHC
Q 018013          217 TASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       217 tA~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      +.+.++.+...  -.|++++|.| -|-+|..+++.++.+|++|++++.++-+.-.+..-|.. +.     .+.+.+    
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~-v~-----~~~~a~----   77 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE-VT-----TMDEAC----   77 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHT----
T ss_pred             hHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE-ee-----ehhhhh----
Confidence            34555555443  7899999999 89999999999999999999999988765544444543 21     222221    


Q ss_pred             CCceeEEEECCCh-H-HHHHHHHHhccCCEEEEEcCccc
Q 018013          295 PKGFDIIYESVGG-D-MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~-~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       ...|+++-++|+ . .-.+-++.|+++-.+..+|....
T Consensus        78 -~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~  115 (163)
T d1li4a1          78 -QEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDV  115 (163)
T ss_dssp             -TTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTT
T ss_pred             -hhccEEEecCCCccchhHHHHHhccCCeEEEEeccccc
Confidence             336999999996 2 44567889999988888887654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.57  E-value=0.0038  Score=53.37  Aligned_cols=78  Identities=19%  Similarity=0.265  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEecCCHhHH-HHHH-HcCCc---EEEeCCCc-cH---HHHHHHHC--C
Q 018013          229 SGKKVLVTAAA--GGTGQFAVQLAKLAGNTVVATCGGEHKA-QLLK-ELGVD---RVINYKAE-DI---KTVFKEEF--P  295 (362)
Q Consensus       229 ~g~~VlI~ga~--g~vG~~aiqla~~~G~~Vi~~~~~~~~~-~~l~-~~g~~---~v~~~~~~-~~---~~~~~~~~--~  295 (362)
                      .|+++||+||+  .|+|.++++.+...|++|+.+.++.++. +.+. +++..   ...|..++ +.   .+.+.+..  .
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence            68999999964  4799999999999999999999887765 3343 45543   22344432 22   22333222  2


Q ss_pred             CceeEEEECCC
Q 018013          296 KGFDIIYESVG  306 (362)
Q Consensus       296 ~g~Dvvid~~g  306 (362)
                      +.+|+++++.|
T Consensus        85 ~~ld~~i~~ag   95 (268)
T d2h7ma1          85 NKLDGVVHSIG   95 (268)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCcceeeeccc
Confidence            56999999987

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.55  E-value=0.0049  Score=49.27  Aligned_cols=97  Identities=13%  Similarity=0.138  Sum_probs=63.1

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cC---CcEEEeCCCccHHHHHHHHCC
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LG---VDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g---~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      +|.+... .++++|+|.| +||.+.+++..+...+.+|+++.|+.++.+.+.+ +.   ....+....         ..-
T Consensus         8 ~l~~~~~~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~---------~~~   77 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS---------IPL   77 (171)
T ss_dssp             HHHHTTCCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---------CCC
T ss_pred             HHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc---------ccc
Confidence            4555554 7899999999 7999999888887777799999999998877743 32   212222211         112


Q ss_pred             CceeEEEECCChHH----HHHHHHHhccCCEEEEEc
Q 018013          296 KGFDIIYESVGGDM----FNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       296 ~g~Dvvid~~g~~~----~~~~~~~l~~~G~~v~~G  327 (362)
                      ..+|+++||+.-.+    .......++++..++++-
T Consensus        78 ~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~v  113 (171)
T d1p77a1          78 QTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQ  113 (171)
T ss_dssp             SCCSEEEECCCC-------CCCHHHHHHCSCEEESC
T ss_pred             cccceeeecccccccccccchhhhhhcccceeeeee
Confidence            46899999987321    111233455666666653

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.54  E-value=0.0086  Score=47.37  Aligned_cols=97  Identities=14%  Similarity=0.126  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .+++|+|.| +|.+|..+++.+...|.+|++++++.++.+.+.+ ++...+...............  ...|.++.+...
T Consensus         1 ~~K~IliiG-aG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~i~~~~~   77 (182)
T d1e5qa1           1 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV--AKHDLVISLIPY   77 (182)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHH--TTSSEEEECSCG
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhh--hccceeEeeccc
Confidence            368999998 6999999999999999999999999999998865 333333222222222211112  246788877775


Q ss_pred             -HHHHHHHHHhccCCEEEEEcC
Q 018013          308 -DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       308 -~~~~~~~~~l~~~G~~v~~G~  328 (362)
                       ........+++.+-.++.+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~   99 (182)
T d1e5qa1          78 TFHATVIKSAIRQKKHVVTTSY   99 (182)
T ss_dssp             GGHHHHHHHHHHHTCEEECSSC
T ss_pred             hhhhHHHHHHHhhccceeeccc
Confidence             334444456666667766544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.53  E-value=0.019  Score=43.35  Aligned_cols=75  Identities=12%  Similarity=0.119  Sum_probs=56.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      +|+|.| .|.+|..+++.+...|.+|++++.++++.+.+.+ ++.. ++..+..+ .+.+++..-..+|.++-++..+.
T Consensus         2 ~IvI~G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~-~~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTK-IKTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTS-HHHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccc-hhhhhhcChhhhhhhcccCCcHH
Confidence            689999 6999999999999999999999999999988864 5654 44333333 22333343366899999888653

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.0012  Score=56.11  Aligned_cols=99  Identities=18%  Similarity=0.147  Sum_probs=68.4

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHH
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKE  292 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~  292 (362)
                      .|..... +||++||=+|.  |.|..+..+++..|++|++++.+++..+.+++    .|..   .+...+..++      
T Consensus        24 ~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~------   95 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY------   95 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC------
T ss_pred             HHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc------
Confidence            3445555 99999999983  44666778888889999999999887776654    4643   2222221111      


Q ss_pred             HCCCceeEEEECCC-------hHHHHHHHHHhccCCEEEEEc
Q 018013          293 EFPKGFDIIYESVG-------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       293 ~~~~g~Dvvid~~g-------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      ...+.+|+|+-.-.       ...++++.+.|+|||+++..-
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            22456999986432       257888999999999998753

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.44  E-value=0.0048  Score=53.80  Aligned_cols=98  Identities=17%  Similarity=0.159  Sum_probs=66.8

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHHHCCCce
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      .++..++|++||=+|  -|.|..+..+|+..|++|++++.+++..+.++    +.|....+.....+.     ....+.+
T Consensus        55 ~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~-----~~~~~~f  127 (291)
T d1kpia_          55 DKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW-----EEFDEPV  127 (291)
T ss_dssp             HTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG-----GGCCCCC
T ss_pred             HhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc-----ccccccc
Confidence            444449999999999  34566788899999999999999998876654    455532111111111     1223569


Q ss_pred             eEEEEC-----CCh-----------HHHHHHHHHhccCCEEEEEc
Q 018013          299 DIIYES-----VGG-----------DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       299 Dvvid~-----~g~-----------~~~~~~~~~l~~~G~~v~~G  327 (362)
                      |.|+..     ++.           ..++.+.+.|+|||+++.-.
T Consensus       128 D~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         128 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             SEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            988753     221           46888999999999998643

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.43  E-value=0.0046  Score=51.78  Aligned_cols=91  Identities=25%  Similarity=0.302  Sum_probs=67.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      +++.+||=.| + |.|..+..+++ .|++|++++.++...+.+++.+....+.....++.     ...+.+|+|+....-
T Consensus        41 ~~~~~vLDiG-c-G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~-----~~~~~fD~ii~~~~~  112 (246)
T d2avna1          41 KNPCRVLDLG-G-GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP-----FPSGAFEAVLALGDV  112 (246)
T ss_dssp             CSCCEEEEET-C-TTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC-----SCTTCEEEEEECSSH
T ss_pred             CCCCEEEEEC-C-CCchhcccccc-cceEEEEeecccccccccccccccccccccccccc-----cccccccceeeecch
Confidence            5777898887 3 46888888876 59999999999999999998777655554433321     123569999875431


Q ss_pred             --------HHHHHHHHHhccCCEEEEE
Q 018013          308 --------DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       308 --------~~~~~~~~~l~~~G~~v~~  326 (362)
                              ..++.+.++|++||.|+..
T Consensus       113 ~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         113 LSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             HHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence                    4678889999999998763

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0017  Score=54.67  Aligned_cols=103  Identities=18%  Similarity=0.063  Sum_probs=67.6

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc---EEEeCCCccHHHHHHHHCCCce
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD---RVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~---~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      +......+|++||=+|  .|.|..+..+++..+.+|++++.++.-.+.+++....   .+. ....+..........+.+
T Consensus        46 la~~~~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f  122 (229)
T d1zx0a1          46 LAAAASSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVI-PLKGLWEDVAPTLPDGHF  122 (229)
T ss_dssp             HHHHHTTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEE-EEESCHHHHGGGSCTTCE
T ss_pred             HHHhhccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccc-cccccccccccccccccc
Confidence            3334447889999998  4667888888887777999999999988888753221   111 111223333333344568


Q ss_pred             eEEE-ECCCh-----------HHHHHHHHHhccCCEEEEEc
Q 018013          299 DIIY-ESVGG-----------DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       299 Dvvi-d~~g~-----------~~~~~~~~~l~~~G~~v~~G  327 (362)
                      |.++ |....           ..+..+.+.|+|||+|+...
T Consensus       123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             cceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            8874 54321           25677889999999998743

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.36  E-value=0.013  Score=43.09  Aligned_cols=90  Identities=10%  Similarity=0.016  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH--hHHHHHHHcCCcEEEe-CCCccHHHHHHHHCCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE--HKAQLLKELGVDRVIN-YKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~--~~~~~l~~~g~~~v~~-~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .|++|||.| .|.+|..-++.+...|++|++++...  +....+++-+....-. +...++         .++++|+.+.
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl---------~~~~lv~~at   80 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLL---------DSCWLAIAAT   80 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGG---------TTCSEEEECC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHh---------CCCcEEeecC
Confidence            589999999 69999999999999999988876543  2233333323332221 222221         4689999999


Q ss_pred             ChHHH-HHHHHHhccCCEEEEEcC
Q 018013          306 GGDMF-NLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       306 g~~~~-~~~~~~l~~~G~~v~~G~  328 (362)
                      +.+.+ .......++.|.+|.+..
T Consensus        81 ~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          81 DDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             CCHHHHHHHHHHHHHcCCEEEeCC
Confidence            87554 466678888999988654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.35  E-value=0.02  Score=45.10  Aligned_cols=48  Identities=17%  Similarity=0.165  Sum_probs=40.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCC-cEEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGV-DRVI  279 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~-~~v~  279 (362)
                      ++|+|+| .|-+|...+..++..|.  +|++++++++..+.+++.+. +...
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~   52 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT   52 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhh
Confidence            3699998 79999999999998885  89999999999999988775 4443

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.31  E-value=0.0038  Score=54.29  Aligned_cols=96  Identities=17%  Similarity=0.201  Sum_probs=66.6

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~~  296 (362)
                      .++..++|++||=+|  .|.|..++.+|+..|++|++++.+++..+.+++    .|..  ..+...  ++.     ....
T Consensus        56 ~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~--d~~-----~~~~  126 (285)
T d1kpga_          56 GKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA--GWE-----QFDE  126 (285)
T ss_dssp             TTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES--CGG-----GCCC
T ss_pred             HHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh--hhh-----cccc
Confidence            334449999999999  366888899999999999999999998887754    3332  111111  111     1134


Q ss_pred             ceeEEEEC-----CCh----HHHHHHHHHhccCCEEEEEc
Q 018013          297 GFDIIYES-----VGG----DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       297 g~Dvvid~-----~g~----~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .+|.|+..     ++.    ..++.+.+.|+|+|+++.--
T Consensus       127 ~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         127 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             cccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            57877652     332    46888999999999998633

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.013  Score=47.14  Aligned_cols=103  Identities=13%  Similarity=0.085  Sum_probs=64.4

Q ss_pred             HHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHH----HHc----CC-cEEEeCCC-ccHH
Q 018013          220 IALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLL----KEL----GV-DRVINYKA-EDIK  287 (362)
Q Consensus       220 ~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l----~~~----g~-~~v~~~~~-~~~~  287 (362)
                      .+|..... -.+++|+|.| +||.+.+++..+...|+ +++++.++.++.+.+    +++    .. ..+.+..+ ..+.
T Consensus         7 ~~l~~~~~~l~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   85 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA   85 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh
Confidence            44555554 5789999999 69999999988888898 888888876654433    222    21 12333333 2222


Q ss_pred             HHHHHHCCCceeEEEECCChHH-------HHHHHHHhccCCEEEEEcC
Q 018013          288 TVFKEEFPKGFDIIYESVGGDM-------FNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       288 ~~~~~~~~~g~Dvvid~~g~~~-------~~~~~~~l~~~G~~v~~G~  328 (362)
                      +..     ..+|+++||+.-.+       +..-+..++++..++++-.
T Consensus        86 ~~~-----~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y  128 (182)
T d1vi2a1          86 EAL-----ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY  128 (182)
T ss_dssp             HHH-----HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred             hhh-----cccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence            221     34799999986211       1112355777888887743

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.30  E-value=0.0045  Score=51.18  Aligned_cols=72  Identities=19%  Similarity=0.186  Sum_probs=48.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .+|||+||+|.+|..++..+...|.  .|+...+++++.+.+.. +...+ ..+-.+.....+..  +++|.|+++++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~-~~d~~~~~~~~~~~--~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVF-IGDITDADSINPAF--QGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEE-ECCTTSHHHHHHHH--TTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEE-Eeeecccccccccc--ccceeeEEEEe
Confidence            5899999999999999999988885  57777888776654432 33322 22223333222222  35899999875

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.25  E-value=0.0061  Score=52.82  Aligned_cols=97  Identities=16%  Similarity=0.264  Sum_probs=64.6

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCce
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      .++..++|++||=+| + |.|..+..+++..|++|++++.+++..+.+++    .|....+.....+..     ...+.+
T Consensus        46 ~~l~l~~g~~VLDiG-C-G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~-----~~~~~f  118 (280)
T d2fk8a1          46 DKLDLKPGMTLLDIG-C-GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE-----DFAEPV  118 (280)
T ss_dssp             TTSCCCTTCEEEEES-C-TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG-----GCCCCC
T ss_pred             HHcCCCCCCEEEEec-C-CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhh-----hhccch
Confidence            334349999999999 3 33456677888889999999999998877754    444211111111111     123568


Q ss_pred             eEEEEC-----CCh----HHHHHHHHHhccCCEEEEE
Q 018013          299 DIIYES-----VGG----DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       299 Dvvid~-----~g~----~~~~~~~~~l~~~G~~v~~  326 (362)
                      |.|+..     ++.    ..++.+.+.|+|+|+++.-
T Consensus       119 D~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         119 DRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             SEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            888653     332    4688899999999999874

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.25  E-value=0.0026  Score=54.91  Aligned_cols=39  Identities=26%  Similarity=0.185  Sum_probs=31.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLL  270 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l  270 (362)
                      .++|+||++|+|.++++.+...|++|++++++ +++.+.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~   43 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   43 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence            36899999999999999999999999987664 4444433

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.20  E-value=0.007  Score=52.98  Aligned_cols=72  Identities=18%  Similarity=0.225  Sum_probs=46.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecC--CH---hHHHHHHHcCCcEEEeC--CC-ccHHHHHHHHCCCceeEEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCG--GE---HKAQLLKELGVDRVINY--KA-EDIKTVFKEEFPKGFDIIYE  303 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~--~~---~~~~~l~~~g~~~v~~~--~~-~~~~~~~~~~~~~g~Dvvid  303 (362)
                      +|||+||+|-+|..++..+...|.+|+++++  ..   ++.+.+...+--.++..  .+ +++.+.++   +.++|+||.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~---~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLIT---KYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH---HHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHH---hcCCceEEe
Confidence            7999999999999999998888999999853  12   22333443332233332  22 22333332   335799999


Q ss_pred             CCC
Q 018013          304 SVG  306 (362)
Q Consensus       304 ~~g  306 (362)
                      +++
T Consensus        79 ~aa   81 (338)
T d1orra_          79 LAG   81 (338)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            986

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.19  E-value=0.0027  Score=53.21  Aligned_cols=94  Identities=19%  Similarity=0.269  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH---HCC----CEEEEecCCHhHHHHHHH---------cCCc--EEEeCCCccHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAK---LAG----NTVVATCGGEHKAQLLKE---------LGVD--RVINYKAEDIKTV  289 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~---~~G----~~Vi~~~~~~~~~~~l~~---------~g~~--~v~~~~~~~~~~~  289 (362)
                      ++|++||..|.  |.|..++.+++   ..|    .+|+.+..+++-.+.+++         .+..  .++..+...   .
T Consensus        79 ~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~---~  153 (223)
T d1r18a_          79 KPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK---G  153 (223)
T ss_dssp             CTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG---C
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccc---c
Confidence            89999999993  44555555555   444    489999998876655532         1222  222222110   0


Q ss_pred             HHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEE-EcC
Q 018013          290 FKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIV-IGM  328 (362)
Q Consensus       290 ~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~-~G~  328 (362)
                      .  .....+|.|+-+.+- +.-+..++.|++||++|. +|.
T Consensus       154 ~--~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg~  192 (223)
T d1r18a_         154 Y--PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGP  192 (223)
T ss_dssp             C--GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             c--ccccceeeEEEEeechhchHHHHHhcCCCcEEEEEEec
Confidence            0  112469988877663 444677899999999987 453

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.16  E-value=0.0029  Score=55.09  Aligned_cols=38  Identities=18%  Similarity=0.219  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEecCCHhH
Q 018013          229 SGKKVLVTAAAG--GTGQFAVQLAKLAGNTVVATCGGEHK  266 (362)
Q Consensus       229 ~g~~VlI~ga~g--~vG~~aiqla~~~G~~Vi~~~~~~~~  266 (362)
                      +|+++||+||+|  |+|.+.++.+...|++|+++.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            689999999876  99999999999999999999876543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.09  E-value=0.016  Score=46.36  Aligned_cols=99  Identities=15%  Similarity=0.050  Sum_probs=64.7

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc-CCc---------EEEeCC--------C
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL-GVD---------RVINYK--------A  283 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~-g~~---------~v~~~~--------~  283 (362)
                      +..+...+|.+||..|.  |.|..+..+|+. |++|++++.+++-.+.+++. ...         ......        .
T Consensus        13 ~~~l~~~~~~rvLd~GC--G~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecC--cCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            34455589999999993  457788888875 99999999999999888752 110         011111        0


Q ss_pred             ccHHHHHHHHCCCceeEEEECCCh---------HHHHHHHHHhccCCEEEEEc
Q 018013          284 EDIKTVFKEEFPKGFDIIYESVGG---------DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       284 ~~~~~~~~~~~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .++...    ....+|+|++...-         ..++.+.++|+++|+++...
T Consensus        90 ~~l~~~----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FALTAR----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSSTHH----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccc----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            110000    01358999886441         35678889999999976543

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0066  Score=50.75  Aligned_cols=92  Identities=16%  Similarity=0.158  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCC-----c--EEEeCCCccHHHHHHHHC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGV-----D--RVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~-----~--~v~~~~~~~~~~~~~~~~  294 (362)
                      ++|++||-.|  .|.|..++.+|+..|  .+|+.++.+++-.+.+++    .+.     .  .+...+...   ..  ..
T Consensus        75 ~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~---~~--~~  147 (224)
T d1i1na_          75 HEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM---GY--AE  147 (224)
T ss_dssp             CTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG---CC--GG
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccc---cc--ch
Confidence            9999999999  466888888898766  489999998887666532    222     1  112111100   00  11


Q ss_pred             CCceeEEEECCCh-HHHHHHHHHhccCCEEEEE
Q 018013          295 PKGFDIIYESVGG-DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       295 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~  326 (362)
                      ...+|+|+-+.+- +..+..++.|++||++|..
T Consensus       148 ~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         148 EAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            2469999987663 4556788999999999873

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.03  E-value=0.011  Score=47.61  Aligned_cols=98  Identities=19%  Similarity=0.219  Sum_probs=65.8

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc---EEEeCCCccHHHHHHHHCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD---RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~---~v~~~~~~~~~~~~~~~~~  295 (362)
                      ..+..++|++||=.|.  |.|..++.+|+. +.+|++++.+++..+.++    +.|..   .++..   +..+..  ...
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g---da~~~~--~~~   98 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DAPEAL--CKI   98 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CHHHHH--TTS
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC---chhhcc--ccc
Confidence            3455599999998883  334555566664 569999999998877775    35652   23322   232222  223


Q ss_pred             CceeEEEECCCh----HHHHHHHHHhccCCEEEEEcC
Q 018013          296 KGFDIIYESVGG----DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       296 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      ..+|.|+-.-..    +.++.+.+.|+++|+++....
T Consensus        99 ~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~~  135 (186)
T d1l3ia_          99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (186)
T ss_dssp             CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEee
Confidence            579998876542    578888999999999987643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.01  E-value=0.0075  Score=51.05  Aligned_cols=35  Identities=17%  Similarity=0.291  Sum_probs=31.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      +.|||+||++|+|.++++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            46899999999999999999999999999988654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.99  E-value=0.0057  Score=54.29  Aligned_cols=44  Identities=30%  Similarity=0.255  Sum_probs=39.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK  271 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~  271 (362)
                      .+|++|||+||+|-+|..++..+...|.+|++++++.++.+.++
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            78999999999999999999888888999999999888776664

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.92  E-value=0.018  Score=49.54  Aligned_cols=101  Identities=20%  Similarity=0.186  Sum_probs=69.4

Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHH
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEE  293 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~  293 (362)
                      |..... +++.+||=.|.  |.|..+..+++..|++|++++.++...+.+++    .|..   .+...+..++.     .
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~-----~  131 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-----C  131 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----S
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc-----c
Confidence            344445 89999999983  45677788888889999999999887776653    4442   23322222210     1


Q ss_pred             CCCceeEEEECCC-------hHHHHHHHHHhccCCEEEEEcCc
Q 018013          294 FPKGFDIIYESVG-------GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       294 ~~~g~Dvvid~~g-------~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ..+.+|+|+-.-.       ...++.+.++|+|||+|+.....
T Consensus       132 ~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~  174 (282)
T d2o57a1         132 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  174 (282)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             cccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEee
Confidence            2356999986533       15788999999999999886543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.91  E-value=0.016  Score=47.83  Aligned_cols=97  Identities=21%  Similarity=0.241  Sum_probs=65.8

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc--EEEeCCCccHHHHHHHHCCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD--RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~--~v~~~~~~~~~~~~~~~~~~  296 (362)
                      +....+++++||=.| + |.|..+..+++. |++|++++.+++-.+.++    +.+.+  .+...+..++.     ...+
T Consensus         9 ~~~~l~~~~rVLDiG-c-G~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~~~~   80 (231)
T d1vl5a_           9 QIAALKGNEEVLDVA-T-GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----FTDE   80 (231)
T ss_dssp             HHHTCCSCCEEEEET-C-TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----SCTT
T ss_pred             HhcCCCCcCEEEEec-c-cCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----cccc
Confidence            334449999999999 3 367777777754 789999999988777664    34543  22322222210     1235


Q ss_pred             ceeEEEECCC-------hHHHHHHHHHhccCCEEEEEc
Q 018013          297 GFDIIYESVG-------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       297 g~Dvvid~~g-------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .+|+|+....       ...+..+.++|+|||+++..-
T Consensus        81 ~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          81 RFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            6999987644       156889999999999999753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.86  E-value=0.043  Score=42.40  Aligned_cols=81  Identities=20%  Similarity=0.289  Sum_probs=56.3

Q ss_pred             EEEEEcCCchHHHHHHH-HHHHCCCEEEEecCCHhHHHHHHH-cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          232 KVLVTAAAGGTGQFAVQ-LAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiq-la~~~G~~Vi~~~~~~~~~~~l~~-~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      +|.++| +|-+|.+.++ +.+.-+.+|+++++++++.+.+.+ +|+.. .+..+ .+         ...|+||-|+-...
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~-~v---------~~~Div~lavkP~~   69 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLP-EL---------HSDDVLILAVKPQD   69 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC-CC---------CTTSEEEECSCHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-ccccc-cc---------cccceEEEecCHHH
Confidence            588898 7999998877 555544799999999999888864 66643 22211 10         23688888887766


Q ss_pred             HHHHHHHhccCCEEE
Q 018013          310 FNLCLKALAVYGRLI  324 (362)
Q Consensus       310 ~~~~~~~l~~~G~~v  324 (362)
                      +...++-+++.+.++
T Consensus        70 ~~~v~~~l~~~~~~v   84 (152)
T d1yqga2          70 MEAACKNIRTNGALV   84 (152)
T ss_dssp             HHHHHTTCCCTTCEE
T ss_pred             HHHhHHHHhhcccEE
Confidence            667776666666554

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.84  E-value=0.015  Score=48.50  Aligned_cols=97  Identities=20%  Similarity=0.271  Sum_probs=65.4

Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc--EEEeCCCccHHHHHHHHC
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD--RVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~--~v~~~~~~~~~~~~~~~~  294 (362)
                      |.+... ++|++||=.|.  |.|..+..+++. +++|++++.+++-.+.++    +.+.+  .++..+..++.     ..
T Consensus         8 l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~~   79 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----FP   79 (234)
T ss_dssp             HHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----SC
T ss_pred             HHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-----cc
Confidence            334444 99999999983  557777777774 689999999988776664    34443  22222211110     12


Q ss_pred             CCceeEEEECCC-------hHHHHHHHHHhccCCEEEEE
Q 018013          295 PKGFDIIYESVG-------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       295 ~~g~Dvvid~~g-------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      .+.+|+|+-+-.       ...++.+.+.|+|+|+++..
T Consensus        80 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          80 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence            356999987544       25788999999999998875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.81  E-value=0.0033  Score=44.77  Aligned_cols=35  Identities=26%  Similarity=0.198  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +|++|+|.| .|..|+++++++...|++|++++.+.
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~g~~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLARGVTPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESSS
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEeeCCc
Confidence            578999999 69999999999999999999998754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.80  E-value=0.031  Score=42.08  Aligned_cols=92  Identities=20%  Similarity=0.169  Sum_probs=62.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEE-eCCCccHHHHHHHHCCCceeEEEECCChH-
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVI-NYKAEDIKTVFKEEFPKGFDIIYESVGGD-  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~-~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-  308 (362)
                      ++++|.| .|-+|..+++.+...|.+|++++.++++.+.+++.|...++ |..+.+.   +++..-..+|.++-+++.+ 
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~---l~~a~i~~a~~vi~~~~~~~   76 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENE---LLSLGIRNFEYVIVAIGANI   76 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTH---HHHHTGGGCSEEEECCCSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchh---hhccCCccccEEEEEcCchH
Confidence            3578888 79999999999999999999999999999999888875443 3333333   2333334588888888752 


Q ss_pred             H---HHHHHHHhccCCEEEEE
Q 018013          309 M---FNLCLKALAVYGRLIVI  326 (362)
Q Consensus       309 ~---~~~~~~~l~~~G~~v~~  326 (362)
                      .   +-.....+.+..+++..
T Consensus        77 ~~~~~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          77 QASTLTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEE
T ss_pred             HhHHHHHHHHHHcCCCcEEee
Confidence            2   12223334445566544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.74  E-value=0.007  Score=53.65  Aligned_cols=76  Identities=17%  Similarity=0.194  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHc----CCcEE-EeCCCccHHHHHHHHCCCceeEEE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KEL----GVDRV-INYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~----g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      ++++|||+||+|-+|..+++.+...|.+|++++++..+...+ +..    ++..+ .|.++  .....+......+|+++
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~l~~~~~~~~~~~v~   84 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--QNKLLESIREFQPEIVF   84 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--HHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccC--hHhhhhhhhhchhhhhh
Confidence            579999999999999999999999999999999876543222 211    23222 23323  22222222234578999


Q ss_pred             ECCC
Q 018013          303 ESVG  306 (362)
Q Consensus       303 d~~g  306 (362)
                      .+++
T Consensus        85 ~~aa   88 (356)
T d1rkxa_          85 HMAA   88 (356)
T ss_dssp             ECCS
T ss_pred             hhhc
Confidence            9876

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.64  E-value=0.061  Score=41.54  Aligned_cols=97  Identities=16%  Similarity=0.145  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHh--H-HHHHHHcCCcEEEeCCCccHHHH---------------
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEH--K-AQLLKELGVDRVINYKAEDIKTV---------------  289 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~--~-~~~l~~~g~~~v~~~~~~~~~~~---------------  289 (362)
                      .++|.|.|++|.+|..+..+.+..  .++|++.+....  + .+.++++.+..+.-.+.......               
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            379999999999999999999876  368877765433  2 23446788877655443322211               


Q ss_pred             --HHHHCCCceeEEEECCC-hHHHHHHHHHhccCCEEEEE
Q 018013          290 --FKEEFPKGFDIIYESVG-GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       290 --~~~~~~~g~Dvvid~~g-~~~~~~~~~~l~~~G~~v~~  326 (362)
                        +.+.....+|+++++.. ...+...+.+++.+-++...
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence              11122245899999854 57788888888888776543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.61  E-value=0.022  Score=46.44  Aligned_cols=87  Identities=15%  Similarity=0.116  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|+.++++++.+|++|++.+.........  .+.      ...++.+.+.+     .|+++.++.. 
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~--~~~------~~~~l~~~l~~-----sDii~~~~plt  107 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK--KGY------YVDSLDDLYKQ-----ADVISLHVPDV  107 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH--TTC------BCSCHHHHHHH-----CSEEEECSCCC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc--cee------eeccccccccc-----cccccccCCcc
Confidence            479999999 89999999999999999999998754432221  111      11234444332     5666666541 


Q ss_pred             -H----HHHHHHHHhccCCEEEEEcCc
Q 018013          308 -D----MFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       308 -~----~~~~~~~~l~~~G~~v~~G~~  329 (362)
                       +    .-...++.|+++..||.++.-
T Consensus       108 ~~T~~li~~~~l~~mk~~a~lIN~sRG  134 (197)
T d1j4aa1         108 PANVHMINDESIAKMKQDVVIVNVSRG  134 (197)
T ss_dssp             GGGTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             ccccccccHHHHhhhCCccEEEecCch
Confidence             1    123456666666666666553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.58  E-value=0.015  Score=52.33  Aligned_cols=32  Identities=19%  Similarity=0.155  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEec
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC  261 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~  261 (362)
                      |++|||+||+|-+|..++..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            68999999999999999999999999999986

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.47  E-value=0.0049  Score=51.67  Aligned_cols=37  Identities=30%  Similarity=0.258  Sum_probs=33.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK  266 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~  266 (362)
                      ++++||+||++|+|.+.++.+...|++|+++++++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            4789999999999999999999999999999987653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.45  E-value=0.063  Score=41.81  Aligned_cols=44  Identities=18%  Similarity=0.098  Sum_probs=38.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD  276 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~  276 (362)
                      +|.|+| .|-+|...++-+...|.+|++.++++++.+.+.+.++.
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~   45 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAE   45 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhh
Confidence            588898 89999999988888999999999999999998887763

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.44  E-value=0.052  Score=42.34  Aligned_cols=102  Identities=20%  Similarity=0.109  Sum_probs=74.9

Q ss_pred             HHHHHHHhCC--CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCC
Q 018013          218 ASIALEQAGP--ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       218 A~~al~~~~~--~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      .+.++.+...  =.|++++|.| =|-+|.-+++-++.+|++|+++..++-+.-++.--|.. +.     .+.+.+     
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~-v~-----~~~~a~-----   76 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV-----TLDEIV-----   76 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHHT-----
T ss_pred             HHHHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCc-cC-----chhHcc-----
Confidence            3444444433  7899999999 79999999999999999999999988665444433432 21     222222     


Q ss_pred             CceeEEEECCChH--HHHHHHHHhccCCEEEEEcCccc
Q 018013          296 KGFDIIYESVGGD--MFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       296 ~g~Dvvid~~g~~--~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +..|+++-++|+.  .-..-++.|+++..+..+|....
T Consensus        77 ~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~  114 (163)
T d1v8ba1          77 DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD  114 (163)
T ss_dssp             TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             ccCcEEEEcCCCCccccHHHHHHhhCCeEEEeccccch
Confidence            3479999999973  34567889999999999888654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.42  E-value=0.046  Score=44.54  Aligned_cols=84  Identities=21%  Similarity=0.254  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      =.|++|+|.| .|.+|..+++++...|++|++++.+.++......+|...+ +.  ++       .....+|+++-|..+
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~~--~~-------~~~~~~DI~iPcA~~   93 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-AL--ED-------VLSTPCDVFAPCAMG   93 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CG--GG-------GGGCCCSEEEECSCS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-Cc--cc-------cccccceeeeccccc
Confidence            4789999999 8999999999999999999999999998888888887543 11  11       223468999888654


Q ss_pred             -HHHHHHHHHhccCCEEE
Q 018013          308 -DMFNLCLKALAVYGRLI  324 (362)
Q Consensus       308 -~~~~~~~~~l~~~G~~v  324 (362)
                       ..-....+.++  -++|
T Consensus        94 ~~I~~~~a~~i~--ak~i  109 (201)
T d1c1da1          94 GVITTEVARTLD--CSVV  109 (201)
T ss_dssp             CCBCHHHHHHCC--CSEE
T ss_pred             ccccHHHHhhhh--hhee
Confidence             22233444443  3444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.028  Score=49.42  Aligned_cols=100  Identities=15%  Similarity=0.187  Sum_probs=60.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecC----CHhHHHHHHH---cCCcEE-EeCCCc-cHHHHHHHHCCCceeEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCG----GEHKAQLLKE---LGVDRV-INYKAE-DIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~----~~~~~~~l~~---~g~~~v-~~~~~~-~~~~~~~~~~~~g~Dvvi  302 (362)
                      +|||+||+|-+|..++..+...|.+|+++++    ........+.   -.+..+ .|-.+. .+.+.++   ..++|+||
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~---~~~~d~Vi   78 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILH---DHAIDTVI   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHH---HTTCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHh---ccCCCEEE
Confidence            6999999999999999999999999999864    2222232222   233322 233332 2222322   34699999


Q ss_pred             ECCCh----H-------HH-------HHHHHHhccC--CEEEEEcCcccccC
Q 018013          303 ESVGG----D-------MF-------NLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       303 d~~g~----~-------~~-------~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      ++++.    .       .+       ..+++.++..  -+||.+++...+..
T Consensus        79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~  130 (338)
T d1udca_          79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGD  130 (338)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCS
T ss_pred             ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcc
Confidence            98752    1       11       1344455444  48888888776543

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.33  E-value=0.023  Score=51.53  Aligned_cols=107  Identities=17%  Similarity=0.096  Sum_probs=68.9

Q ss_pred             HHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHc-----------CC---cEEEeCC
Q 018013          218 ASIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKEL-----------GV---DRVINYK  282 (362)
Q Consensus       218 A~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~-----------g~---~~v~~~~  282 (362)
                      ..+.+.++..++|++++=.|  .|+|..+.++|+..|+ +|++++.++...+.+++.           |.   ...+...
T Consensus       205 i~~Il~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~  282 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK  282 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred             HHHHHHHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeee
Confidence            45566777679999988887  5789999999999987 899999998776666421           11   1111111


Q ss_pred             CccHH-HHHHHHCCCceeEEEECCC---h---HHHHHHHHHhccCCEEEEEc
Q 018013          283 AEDIK-TVFKEEFPKGFDIIYESVG---G---DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       283 ~~~~~-~~~~~~~~~g~Dvvid~~g---~---~~~~~~~~~l~~~G~~v~~G  327 (362)
                      ..... ...... -..+|+++-+.-   .   ..+.+.++.|++||+||..-
T Consensus       283 ~~f~~~~~~d~~-~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         283 KSFVDNNRVAEL-IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SCSTTCHHHHHH-GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             echhhccccccc-cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            11110 111111 124778775422   2   45778889999999999753

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.32  E-value=0.03  Score=49.65  Aligned_cols=104  Identities=15%  Similarity=0.180  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      ..+.+|||+||+|-+|..++..+...|.+|+++++...+.. ........+...+-.+........  .++|.|+.+++.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~Vih~a~~   89 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TEDMFCDEFHLVDLRVMENCLKVT--EGVDHVFNLAAD   89 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CGGGTCSEEEECCTTSHHHHHHHH--TTCSEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hhhcccCcEEEeechhHHHHHHHh--hcCCeEeecccc
Confidence            35789999999999999999999999999999876433211 112222222222323443433333  468999998752


Q ss_pred             H-------------------HHHHHHHHhccCC--EEEEEcCcccccC
Q 018013          308 D-------------------MFNLCLKALAVYG--RLIVIGMISQYQG  334 (362)
Q Consensus       308 ~-------------------~~~~~~~~l~~~G--~~v~~G~~~~~~~  334 (362)
                      .                   .....+.+.+..|  +||.+++...+..
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~  137 (363)
T d2c5aa1          90 MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPE  137 (363)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCG
T ss_pred             cccccccccccccccccccchhhHHHHhHHhhCccccccccccccccc
Confidence            0                   1123445555555  7998888776553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.31  E-value=0.017  Score=51.50  Aligned_cols=35  Identities=20%  Similarity=0.268  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      .+.|||+||+|-+|..++..+...|.+|+++++..
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            36899999999999999999999999999999843

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.31  E-value=0.014  Score=46.61  Aligned_cols=40  Identities=20%  Similarity=0.214  Sum_probs=36.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK  271 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~  271 (362)
                      +|.|+||+|++|.++++.+...|++|++..|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            6889988999999999999999999999999999877664

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.31  E-value=0.041  Score=45.78  Aligned_cols=102  Identities=16%  Similarity=0.146  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHHH-----CCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKEE-----FPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~~-----~~~  296 (362)
                      ...++||=.|  +++|..++.+|+.+  +.+|+.+..+++..+.++    +.|....+.....+..+.+.+.     ..+
T Consensus        58 ~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~  135 (227)
T d1susa1          58 INAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG  135 (227)
T ss_dssp             HTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTT
T ss_pred             cCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCC
Confidence            4668999998  67888888898876  469999999988776664    3566422222222233333322     235


Q ss_pred             ceeEEEECCC-h---HHHHHHHHHhccCCEEEEEcCccc
Q 018013          297 GFDIIYESVG-G---DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       297 g~Dvvid~~g-~---~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .+|.||--.. .   ..++.++++|++||.+|.=.....
T Consensus       136 ~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNvl~~  174 (227)
T d1susa1         136 SYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWN  174 (227)
T ss_dssp             CBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETTTGG
T ss_pred             ceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccCCCC
Confidence            6998876544 2   578899999999999988766544

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.27  E-value=0.051  Score=46.41  Aligned_cols=75  Identities=20%  Similarity=0.313  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-----HHHH---HHHcCCcEEEeCCCccHHHHHHHHCCCceeE
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-----KAQL---LKELGVDRVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-----~~~~---l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +..+|||+||+|-+|..++..+...|.+|++++++..     +.+.   +...+++.+ ..+-.+........  .+.+.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v-~~d~~d~~~~~~~~--~~~~~   78 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-EASLDDHQRLVDAL--KQVDV   78 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-CCCSSCHHHHHHHH--TTCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEE-Eeecccchhhhhhc--cCcch
Confidence            4467999999999999999988889999999988532     2222   334555433 22222323332222  35678


Q ss_pred             EEECCC
Q 018013          301 IYESVG  306 (362)
Q Consensus       301 vid~~g  306 (362)
                      ++.+.+
T Consensus        79 ~~~~~~   84 (312)
T d1qyda_          79 VISALA   84 (312)
T ss_dssp             EEECCC
T ss_pred             hhhhhh
Confidence            888765

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.041  Score=45.59  Aligned_cols=100  Identities=16%  Similarity=0.106  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc-CCc------------EEEeCCC-------ccH
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL-GVD------------RVINYKA-------EDI  286 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~-g~~------------~v~~~~~-------~~~  286 (362)
                      ..++.+||..| +|. |..+..+|+ .|++|++++.++.-.+.+++. +..            .......       .++
T Consensus        43 ~~~~~rvLd~G-CG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~  119 (229)
T d2bzga1          43 GKSGLRVFFPL-CGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSI  119 (229)
T ss_dssp             TCCSCEEEETT-CTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCG
T ss_pred             CCCCCEEEEeC-CCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcch
Confidence            37889999998 443 777777776 699999999999988877642 211            1110000       111


Q ss_pred             HHHHHHHCCCceeEEEECCC---------hHHHHHHHHHhccCCEEEEEcCcc
Q 018013          287 KTVFKEEFPKGFDIIYESVG---------GDMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       287 ~~~~~~~~~~g~Dvvid~~g---------~~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .+. .......+|+|+++..         ...++.+.++|+|+|+++......
T Consensus       120 ~~l-~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~~  171 (229)
T d2bzga1         120 FDL-PRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLSY  171 (229)
T ss_dssp             GGG-GGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred             hhc-cccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEccc
Confidence            110 0112356899999754         136778899999999987765543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.21  E-value=0.087  Score=43.74  Aligned_cols=93  Identities=23%  Similarity=0.277  Sum_probs=63.1

Q ss_pred             HhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCce
Q 018013          224 QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       224 ~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      ....+++++||=.| +| .|..+..+++ .|++|++++.+++-.+.+++    .+.. .++..+..++      ...+.+
T Consensus        36 ~~~~~~~~~iLDiG-cG-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l------~~~~~f  106 (251)
T d1wzna1          36 EDAKREVRRVLDLA-CG-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI------AFKNEF  106 (251)
T ss_dssp             HTCSSCCCEEEEET-CT-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC------CCCSCE
T ss_pred             HhcCCCCCEEEEeC-CC-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc------cccccc
Confidence            33447788999998 33 3777777776 58999999999988877754    3332 2333222221      123569


Q ss_pred             eEEEECCCh----------HHHHHHHHHhccCCEEEE
Q 018013          299 DIIYESVGG----------DMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       299 Dvvid~~g~----------~~~~~~~~~l~~~G~~v~  325 (362)
                      |+|+...+.          ..++.+.++|++||+++.
T Consensus       107 D~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             chHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            999875431          357788999999999976

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.19  E-value=0.021  Score=50.03  Aligned_cols=76  Identities=13%  Similarity=0.105  Sum_probs=47.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH-----hHHHHHH----HcCC--cEEEeCCCccHHHHHHHHCCCcee
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE-----HKAQLLK----ELGV--DRVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~-----~~~~~l~----~~g~--~~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      +++||+||+|-+|..++..+...|.+|+++++..     .+.+.+.    ....  ..++..+-.+...........++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            6899999999999999999999999999999742     1222111    1111  122222223333222222335789


Q ss_pred             EEEECCC
Q 018013          300 IIYESVG  306 (362)
Q Consensus       300 vvid~~g  306 (362)
                      +|+.+++
T Consensus        82 ~Vih~Aa   88 (339)
T d1n7ha_          82 EVYNLAA   88 (339)
T ss_dssp             EEEECCS
T ss_pred             hhhhccc
Confidence            9999987

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.09  E-value=0.056  Score=41.78  Aligned_cols=84  Identities=12%  Similarity=0.223  Sum_probs=63.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH-HHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMF  310 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l-~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~  310 (362)
                      +|.++| +|-+|.+.+.-....|.+++++.++.++.+.+ +++|+...     .+..+.+.     ..|+||-|+-...+
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~-----~~~~~~~~-----~~dvIilavkp~~~   70 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA-----MSHQDLID-----QVDLVILGIKPQLF   70 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC-----SSHHHHHH-----TCSEEEECSCGGGH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee-----chhhhhhh-----ccceeeeecchHhH
Confidence            578888 89999998886677789999999999988877 46776422     23333332     47899999987777


Q ss_pred             HHHHHHhccCCEEEEE
Q 018013          311 NLCLKALAVYGRLIVI  326 (362)
Q Consensus       311 ~~~~~~l~~~G~~v~~  326 (362)
                      ...++.++++-.++.+
T Consensus        71 ~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          71 ETVLKPLHFKQPIISM   86 (152)
T ss_dssp             HHHHTTSCCCSCEEEC
T ss_pred             HHHhhhcccceeEecc
Confidence            8888888877766644

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.07  E-value=0.04  Score=45.79  Aligned_cols=101  Identities=17%  Similarity=0.118  Sum_probs=67.7

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~  295 (362)
                      +..+..+||++||=.|+  |.|..+..+|+..|  .+|++++.+++..+.+++    .+....+..+....... . ...
T Consensus        66 l~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~-~-~~~  141 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY-R-ALV  141 (227)
T ss_dssp             CCCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG-T-TTC
T ss_pred             ccccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccc-c-ccc
Confidence            44455599999999984  45778888999876  499999999998887754    22222222222111110 0 112


Q ss_pred             CceeEEEECCCh-----HHHHHHHHHhccCCEEEEE
Q 018013          296 KGFDIIYESVGG-----DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       296 ~g~Dvvid~~g~-----~~~~~~~~~l~~~G~~v~~  326 (362)
                      ..+|+++.....     ..+..+.+.|+++|+++.+
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            468988876542     3688889999999999875

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0038  Score=52.35  Aligned_cols=102  Identities=12%  Similarity=0.116  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .+++|||+||+|-+|..+++.+...|.  +|+++++++.+...-..-..... .|..+  ..+.....  .++|+++.|+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~--~~~~~~~~--~~~d~vi~~~   88 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK--LDDYASAF--QGHDVGFCCL   88 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG--GGGGGGGG--SSCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc--cccccccc--cccccccccc
Confidence            557999999999999999988887785  89999986543222111122222 22222  11111111  5689999998


Q ss_pred             ChH---------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          306 GGD---------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       306 g~~---------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      |..               ......+.....  -+||.++....+..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~  134 (232)
T d2bkaa1          89 GTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS  134 (232)
T ss_dssp             CCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT
T ss_pred             cccccccchhhhhhhcccccceeeecccccCccccccCCccccccC
Confidence            731               111233333333  47898888776544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.04  E-value=0.076  Score=46.61  Aligned_cols=39  Identities=23%  Similarity=0.286  Sum_probs=34.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHK  266 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~  266 (362)
                      ++.++|+|+||+|.+|..++..+...|.+|++++|+..+
T Consensus         1 ~~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           1 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            457899999999999999999999999999999986554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.98  E-value=0.17  Score=43.97  Aligned_cols=111  Identities=18%  Similarity=0.107  Sum_probs=65.2

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC----CHhHHHHHHHcCC------cEEEeCCCccHHHHHH
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG----GEHKAQLLKELGV------DRVINYKAEDIKTVFK  291 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~----~~~~~~~l~~~g~------~~v~~~~~~~~~~~~~  291 (362)
                      +.+......+++||+||+|-+|..++..+...|.+|+++++    +....+.++....      -.++..+..+......
T Consensus         8 ~~~~~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~   87 (341)
T d1sb8a_           8 LRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN   87 (341)
T ss_dssp             HHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH
T ss_pred             HHHhCCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccc
Confidence            33333345678999999999999999999999999999874    2333333433221      1334444444443333


Q ss_pred             HHCCCceeEEEECCCh---H---------------HHHHHHHHhccCC--EEEEEcCcccccC
Q 018013          292 EEFPKGFDIIYESVGG---D---------------MFNLCLKALAVYG--RLIVIGMISQYQG  334 (362)
Q Consensus       292 ~~~~~g~Dvvid~~g~---~---------------~~~~~~~~l~~~G--~~v~~G~~~~~~~  334 (362)
                      ..  .+.+.++.+...   .               .....+..+...+  +||.+++...+..
T Consensus        88 ~~--~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~  148 (341)
T d1sb8a_          88 AC--AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGD  148 (341)
T ss_dssp             HH--TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTT
T ss_pred             cc--ccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCC
Confidence            22  335566555431   0               1112334444444  9999988776543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.049  Score=43.50  Aligned_cols=93  Identities=18%  Similarity=0.127  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh-----------------------HHHHHHHcCCcEEEeCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH-----------------------KAQLLKELGVDRVINYKAE  284 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~-----------------------~~~~l~~~g~~~v~~~~~~  284 (362)
                      ..+++|+|+| +|+.|+.++..+...|.+|++....++                       ..+.++++|++..++..-.
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~~Vt  119 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT  119 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCCEEc
Confidence            6679999999 799999999999999999999987531                       1122344666655543311


Q ss_pred             cHHHHHHHHCCCceeEEEECCChHHHHHHHHHhccCCEEEEEcC
Q 018013          285 DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       285 ~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      .       .....+|.||-++|.......+..+..+.+++.+|.
T Consensus       120 ~-------~~~~~~d~vilAtG~~~~~~~~pg~~~g~~v~vigg  156 (179)
T d1ps9a3         120 A-------DQLQAFDETILASGIPNRALAQPLIDSGKTVHLIGG  156 (179)
T ss_dssp             S-------SSSCCSSEEEECCCEECCTTHHHHHTTTCCEEECGG
T ss_pred             c-------cccccceeEEEeecCCCcccccchhccCCEEEEECC
Confidence            1       112468899999885322223344445666766765

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.90  E-value=0.055  Score=44.04  Aligned_cols=91  Identities=24%  Similarity=0.230  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      +++.+||=.|.  |.|..+..+++ .|++|++++.+++..+.+++    .+.. ..+..+..++.     .....+|+|+
T Consensus        36 ~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-----~~~~~fD~I~  107 (226)
T d1ve3a1          36 KKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-----FEDKTFDYVI  107 (226)
T ss_dssp             CSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----SCTTCEEEEE
T ss_pred             CCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccccccc-----ccCcCceEEE
Confidence            67789999983  34777778876 48999999999988877753    3332 22222222210     1235699988


Q ss_pred             ECCC-----h----HHHHHHHHHhccCCEEEEE
Q 018013          303 ESVG-----G----DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       303 d~~g-----~----~~~~~~~~~l~~~G~~v~~  326 (362)
                      -...     .    ..++.+.+.|+|||+++..
T Consensus       108 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         108 FIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            7543     1    2577889999999998754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.76  E-value=0.034  Score=48.22  Aligned_cols=45  Identities=27%  Similarity=0.386  Sum_probs=35.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh--HHHHHHHcCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH--KAQLLKELGV  275 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~--~~~~l~~~g~  275 (362)
                      ++|||+||+|-+|..++..+...|.+|+++++...  +.+.++.+..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc
Confidence            58999999999999999988888999999987432  2344444443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.72  E-value=0.079  Score=41.87  Aligned_cols=44  Identities=14%  Similarity=-0.032  Sum_probs=38.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV  275 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~  275 (362)
                      .+|.++| .|.+|..++.-+...|.+|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcc
Confidence            4688999 8999999888888899999999999999988866443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.71  E-value=0.055  Score=47.57  Aligned_cols=101  Identities=19%  Similarity=0.129  Sum_probs=60.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC----HhHH---HHHHHcCCcEE-EeCCCccHHHHHHHHCCCceeEEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG----EHKA---QLLKELGVDRV-INYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~----~~~~---~~l~~~g~~~v-~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      +.|||+||+|-+|..++..+...|.+|+++++.    .+..   +....-++..+ .|..+  ....-......++|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD--RKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC--HHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC--HHHHHHHHhccCCCEEE
Confidence            679999999999999999988899999998531    1112   22222334333 23333  22221112234799999


Q ss_pred             ECCCh---H-------H--------HHHHHHHhccCC--EEEEEcCccccc
Q 018013          303 ESVGG---D-------M--------FNLCLKALAVYG--RLIVIGMISQYQ  333 (362)
Q Consensus       303 d~~g~---~-------~--------~~~~~~~l~~~G--~~v~~G~~~~~~  333 (362)
                      .+++.   .       .        ....++..+..+  +|+.+++...+.
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg  130 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYG  130 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeec
Confidence            98762   1       0        112333344344  799998876654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.65  E-value=0.16  Score=39.97  Aligned_cols=100  Identities=20%  Similarity=0.047  Sum_probs=65.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEecC--CHhHHHHHHHcCCcEEEeCCCccHHHHHHHH---C------CCcee
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCG--GEHKAQLLKELGVDRVINYKAEDIKTVFKEE---F------PKGFD  299 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~--~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~---~------~~g~D  299 (362)
                      +|.|.| -|-+|...+..+.... .+++++..  .......+.+.+.+...... ..........   .      -.++|
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vD   81 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASE-EFIPRFEKEGFEVAGTLNDLLEKVD   81 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSG-GGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccc-cceeeecccCccccchhhhhhccCC
Confidence            689999 8999999888877554 47776643  33445566677765433221 2111111110   0      13799


Q ss_pred             EEEECCCh-HHHHHHHHHhccCCEEEEEcCccccc
Q 018013          300 IIYESVGG-DMFNLCLKALAVYGRLIVIGMISQYQ  333 (362)
Q Consensus       300 vvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~  333 (362)
                      +|+||+|. ...+.+-.++..|-+.|.++.+....
T Consensus        82 vViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~~~  116 (172)
T d2czca2          82 IIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKADV  116 (172)
T ss_dssp             EEEECCSTTHHHHHHHHHHHHTCEEEECTTSCGGG
T ss_pred             EEEECCCCCCCHHHHHHHHHcCCCEEEECCCCccc
Confidence            99999995 55667778889999999988876543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.65  E-value=0.21  Score=37.61  Aligned_cols=75  Identities=19%  Similarity=0.213  Sum_probs=49.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-CCCEEEEecCCHhHHHHHHHcCCcEEEeCCCc-cHHHHHHHHCCCceeEEEECCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKL-AGNTVVATCGGEHKAQLLKELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~-~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~-~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|.|.|++|-+|+.+++.... .+.++.+.....+....+...++|.++|.... ...+.++.....+.-+|+-++|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence            689999999999998888664 55677666544444444455567777776653 3444444444456677777777

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.56  E-value=0.23  Score=38.44  Aligned_cols=93  Identities=16%  Similarity=0.203  Sum_probs=56.2

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHCCC-EEEEecC-CH--hHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQ-FAVQLAKLAGN-TVVATCG-GE--HKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~-~aiqla~~~G~-~Vi~~~~-~~--~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      -+|.|.| +|++|. .++++.+.... +++++++ +.  .+..+.+++|.....    ..+.+......-.++|+||+++
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~----~~~d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY----AGVEGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES----SHHHHHHHSGGGGGEEEEEECS
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc----cceeeeeecccccccCEEEEcC
Confidence            4789999 899986 56788876654 7777765 32  234567788875431    2233333222235799999998


Q ss_pred             Ch-HHHHHH--HHHhccCCEEEEEcC
Q 018013          306 GG-DMFNLC--LKALAVYGRLIVIGM  328 (362)
Q Consensus       306 g~-~~~~~~--~~~l~~~G~~v~~G~  328 (362)
                      .. ...+..  .+.++.|=.++....
T Consensus        80 pag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          80 SASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             CHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             CchhHHHhHHHHHHHHcCCEEEEccc
Confidence            74 344433  344555555555543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.55  E-value=0.022  Score=48.23  Aligned_cols=32  Identities=28%  Similarity=0.228  Sum_probs=29.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      +|||+||+|-+|..++..++..|.+|+++++.
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            69999999999999999999999999999875

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.34  E-value=0.16  Score=44.43  Aligned_cols=101  Identities=11%  Similarity=0.096  Sum_probs=66.9

Q ss_pred             HHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH-----------cCC----cEEEeCCC
Q 018013          220 IALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE-----------LGV----DRVINYKA  283 (362)
Q Consensus       220 ~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~-----------~g~----~~v~~~~~  283 (362)
                      ..+.....+++++|+=.|  .|.|..+.++|+..|+ ++++++.+++..+.+++           +|.    -.++..+-
T Consensus       142 ~~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~  219 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  219 (328)
T ss_dssp             HHHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred             HHHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence            445566569999988888  5779999999999998 79999998876665532           222    12333322


Q ss_pred             --ccHHHHHHHHCCCceeEEEECCC---h---HHHHHHHHHhccCCEEEEEc
Q 018013          284 --EDIKTVFKEEFPKGFDIIYESVG---G---DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       284 --~~~~~~~~~~~~~g~Dvvid~~g---~---~~~~~~~~~l~~~G~~v~~G  327 (362)
                        ..+.+...     .+|+|+-+.-   .   ..+.+.++.|++||+||..-
T Consensus       220 ~~~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         220 LSEEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TSHHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence              22322221     2678775322   2   35677888899999998754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.22  E-value=0.049  Score=44.05  Aligned_cols=35  Identities=23%  Similarity=0.111  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      .|++|.|.| .|.+|..++++++.+|++|++.++..
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcc
Confidence            578999999 89999999999999999999998753

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.21  E-value=0.074  Score=42.86  Aligned_cols=35  Identities=14%  Similarity=-0.027  Sum_probs=31.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      |+++.|+| .|.+|+..+++++.+|++|+..+....
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            79999999 899999999999999999999987543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.19  E-value=0.11  Score=42.42  Aligned_cols=100  Identities=15%  Similarity=0.113  Sum_probs=64.3

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCcee
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      +..+||++||=.|+  |.|..+..+++..+ .+|++++.+++..+.+++    .+-...+-.+..+....  ...-..+|
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~--~~~~~~vd  127 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY--SGIVEKVD  127 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT--TTTCCCEE
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCcccc--ccccceEE
Confidence            33499999999994  33557777787766 499999999988887743    33222222221111100  01123588


Q ss_pred             EEEECCCh-----HHHHHHHHHhccCCEEEEEcC
Q 018013          300 IIYESVGG-----DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       300 vvid~~g~-----~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      +++.....     ..+.++.+.|+++|+++.+-.
T Consensus       128 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  161 (209)
T d1nt2a_         128 LIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVK  161 (209)
T ss_dssp             EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEecccChhhHHHHHHHHHHHhccCCeEEEEEE
Confidence            88876541     467888899999999987643

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.18  E-value=0.068  Score=42.78  Aligned_cols=90  Identities=20%  Similarity=0.118  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -.|+++.|.| .|.+|+..+++++.+|++|++.++...+... ...+...      .++.+.+.     ..|+|.-++..
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-~~~~~~~------~~l~ell~-----~sDiv~~~~Pl  108 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARA-AQLGIEL------LSLDDLLA-----RADFISVHLPK  108 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHH-HHHTCEE------CCHHHHHH-----HCSEEEECCCC
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHH-hhcCcee------ccHHHHHh-----hCCEEEEcCCC
Confidence            3578999999 7999999999999999999999976543322 2333311      23344433     25777776551


Q ss_pred             --H----HHHHHHHHhccCCEEEEEcCcc
Q 018013          308 --D----MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 --~----~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                        +    .-...++.|+++..||.+|.-+
T Consensus       109 t~~T~~lin~~~l~~mk~~a~lIN~sRG~  137 (184)
T d1ygya1         109 TPETAGLIDKEALAKTKPGVIIVNAARGG  137 (184)
T ss_dssp             STTTTTCBCHHHHTTSCTTEEEEECSCTT
T ss_pred             CchhhhhhhHHHHhhhCCCceEEEecchh
Confidence              1    1235667777777777766544

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.054  Score=44.71  Aligned_cols=102  Identities=20%  Similarity=0.201  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHH----HHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVF----KEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~----~~~~~~g  297 (362)
                      ...++||=+|  .+.|..++.+|+.+  +.+|+.++.+++..+.++    +.|....+.....+..+.+    .......
T Consensus        58 ~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~  135 (219)
T d2avda1          58 IQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT  135 (219)
T ss_dssp             TTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred             cCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCC
Confidence            5678999998  56788888888865  469999999888766664    3565422222222222222    2223456


Q ss_pred             eeEEEECCCh----HHHHHHHHHhccCCEEEEEcCccc
Q 018013          298 FDIIYESVGG----DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       298 ~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|.||--...    +.++.++++|++||.++.=.....
T Consensus       136 fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~l~~  173 (219)
T d2avda1         136 FDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWR  173 (219)
T ss_dssp             EEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGG
T ss_pred             ccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCCccc
Confidence            9988876552    568899999999999998766654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.17  E-value=0.029  Score=42.24  Aligned_cols=30  Identities=20%  Similarity=0.202  Sum_probs=26.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEec
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATC  261 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~  261 (362)
                      +|.|+|++|-+|++..+++...|.+++...
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            689999999999999999999998776543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.16  E-value=0.12  Score=35.99  Aligned_cols=66  Identities=20%  Similarity=0.272  Sum_probs=47.6

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHCCCEEEEecCCH-hHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQF-AVQLAKLAGNTVVATCGGE-HKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~-aiqla~~~G~~Vi~~~~~~-~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      .+|-+.| -||+|+. ++++++..|+.|.+.+..+ +..+.|+++|+........+.+         .++|+|+-+.+
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW---------YDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC---------CCCSEEEECTT
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc---------CCCCEEEEecC
Confidence            3677788 7888975 5799999999999999875 4566788999875443333332         35788877655

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.12  E-value=0.39  Score=37.00  Aligned_cols=44  Identities=16%  Similarity=0.018  Sum_probs=38.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV  275 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~  275 (362)
                      ++|.++| .|-+|...+.-+...|.+|++.++++++.+.+.+.+.
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~   45 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGA   45 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTC
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhc
Confidence            4688998 8999998888778889999999999999888877665

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.12  E-value=0.074  Score=45.18  Aligned_cols=96  Identities=10%  Similarity=-0.035  Sum_probs=67.0

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      ....++.+||=.|  -|.|..+..+++.. ++++++++.++.-.+.+++.... ..+..+..++     ......+|+|+
T Consensus        80 ~~~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l-----~~~~~sfD~v~  152 (268)
T d1p91a_          80 RLDDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL-----PFSDTSMDAII  152 (268)
T ss_dssp             HSCTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC-----SBCTTCEEEEE
T ss_pred             hcCCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhc-----cCCCCCEEEEe
Confidence            3346778888887  34567777777765 67999999999988888764433 2222221111     01235699999


Q ss_pred             ECCChHHHHHHHHHhccCCEEEEEc
Q 018013          303 ESVGGDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       303 d~~g~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .......++++.+.|+|+|+++...
T Consensus       153 ~~~~~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         153 RIYAPCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             EESCCCCHHHHHHHEEEEEEEEEEE
T ss_pred             ecCCHHHHHHHHHHhCCCcEEEEEe
Confidence            8777677889999999999999864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.08  E-value=0.032  Score=44.74  Aligned_cols=85  Identities=15%  Similarity=0.139  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|+| .|.+|...+++++.+|++|++.+++..+       +....    ..++.+.+     ...|+|+.++.- 
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~-------~~~~~----~~~l~ell-----~~sDiv~~~~pl~  103 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE-------GPWRF----TNSLEEAL-----REARAAVCALPLN  103 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC-------SSSCC----BSCSHHHH-----TTCSEEEECCCCS
T ss_pred             cCceEEEec-cccccccceeeeeccccccccccccccc-------cceee----eechhhhh-----hccchhhcccccc
Confidence            478999999 7999999999999999999999886431       11111    12333333     236888887652 


Q ss_pred             -H----HHHHHHHHhccCCEEEEEcCcc
Q 018013          308 -D----MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -~----~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +    .-...++.|+++..||.+|.-+
T Consensus       104 ~~t~~li~~~~l~~mk~~ailIN~~RG~  131 (181)
T d1qp8a1         104 KHTRGLVKYQHLALMAEDAVFVNVGRAE  131 (181)
T ss_dssp             TTTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             cccccccccceeeeccccceEEeccccc
Confidence             1    1246778889999998887543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.05  E-value=0.41  Score=36.32  Aligned_cols=98  Identities=9%  Similarity=0.053  Sum_probs=65.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHC---CCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEF---PKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~---~~g~Dvvid~~g  306 (362)
                      ++|.|+|+.|.+|...+..++..|.+|.+.+++..........+++.++.... ......+....   ..+ .+++|+..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~-~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTEN-MLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTT-SEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCC-ceEEEecc
Confidence            68999998899999999999999999999999877666665667777766554 33333433332   222 47888876


Q ss_pred             h--HHHHHHHHHhccCCEEEEEcCccc
Q 018013          307 G--DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       307 ~--~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .  +..+...+.+  ..+|+..-.+.+
T Consensus        89 vk~~~~~~~~~~~--~~~~v~~hP~~G  113 (152)
T d2pv7a2          89 VKREPLAKMLEVH--TGAVLGLHPMFG  113 (152)
T ss_dssp             CCHHHHHHHHHHC--SSEEEEEEECSC
T ss_pred             cCHHHHHHHHHHc--cCCEEEecccCC
Confidence            3  4444444443  246765434443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.96  E-value=0.1  Score=43.98  Aligned_cols=75  Identities=21%  Similarity=0.366  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh------HHHHHH---HcCCcEEEeCCCccHHHHHHHHCCCceeE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH------KAQLLK---ELGVDRVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~------~~~~l~---~~g~~~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      .++|||+||+|-+|..++..+...|.+|++++++..      +...+.   ..+++ ++..+-.+........  .+.|.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~--~~~~~   79 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDHASLVEAV--KNVDV   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCHHHHHHHH--HTCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcE-EEEeecccchhhhhhh--hhcee
Confidence            468999999999999999999999999999998533      222232   23443 3333323333322222  24788


Q ss_pred             EEECCCh
Q 018013          301 IYESVGG  307 (362)
Q Consensus       301 vid~~g~  307 (362)
                      ++++.+.
T Consensus        80 vi~~~~~   86 (307)
T d1qyca_          80 VISTVGS   86 (307)
T ss_dssp             EEECCCG
T ss_pred             eeecccc
Confidence            8888874

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=93.96  E-value=0.026  Score=49.57  Aligned_cols=71  Identities=14%  Similarity=0.072  Sum_probs=46.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHH-cCCcEEE-eCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKE-LGVDRVI-NYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~-~g~~~v~-~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|||+||+|-+|..+++.+...| .+|++++....+...+.+ ..+..+. |..+ .++.+...    .++|+||.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~----~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV----KKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH----HHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH----hCCCccccccc
Confidence            69999999999999998887778 589998776554443332 2222221 2222 23333222    36899999887

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.94  E-value=0.07  Score=46.76  Aligned_cols=100  Identities=20%  Similarity=0.207  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHH--HCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKE--EFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~--~~~~g~Dv  300 (362)
                      ++|++||=.++  ++|..++.+|+. |+ +|+.++.+++..+.+++    .|...-+.....+..+.+..  ..+..+|+
T Consensus       144 ~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~  220 (324)
T d2as0a2         144 QPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI  220 (324)
T ss_dssp             CTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             CCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence            78999887762  445555555554 66 89999999998887753    56531111112333333322  24567999


Q ss_pred             EEECCC---h-------------HHHHHHHHHhccCCEEEEEcCcc
Q 018013          301 IYESVG---G-------------DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       301 vid~~g---~-------------~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      |+-...   .             +.+..++++|++||.++.+....
T Consensus       221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~  266 (324)
T d2as0a2         221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ  266 (324)
T ss_dssp             EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred             hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence            986322   1             25667888999999999876543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.93  E-value=0.022  Score=44.43  Aligned_cols=89  Identities=13%  Similarity=0.091  Sum_probs=54.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EEEeCCCccHHHHHHHHCCCceeEEEECCChHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RVINYKAEDIKTVFKEEFPKGFDIIYESVGGDM  309 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~  309 (362)
                      +|+|+| +|.+|.+.+..+...|.+|..+++++++.+.....+.+  ........+..+..     ..+|++|-++....
T Consensus         2 kI~IiG-aG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~D~iii~vka~~   75 (167)
T d1ks9a2           2 KITVLG-CGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-----ATSDLLLVTLKAWQ   75 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-----HTCSEEEECSCGGG
T ss_pred             EEEEEC-cCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhh-----cccceEEEeecccc
Confidence            689999 69999998888888999999999987654433222221  11000001111111     35899999998644


Q ss_pred             HHHHH----HHhccCCEEEEE
Q 018013          310 FNLCL----KALAVYGRLIVI  326 (362)
Q Consensus       310 ~~~~~----~~l~~~G~~v~~  326 (362)
                      ....+    ..+.++..++.+
T Consensus        76 ~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          76 VSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             HHHHHHHHHTTSCTTSCEEEE
T ss_pred             hHHHHHhhccccCcccEEeec
Confidence            44444    444555666655

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.71  E-value=0.063  Score=46.50  Aligned_cols=96  Identities=18%  Similarity=0.142  Sum_probs=57.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC-HhHHHHHHHcCC---cEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG-EHKAQLLKELGV---DRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~-~~~~~~l~~~g~---~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      ++|||+||+|-+|..++..+...|.+|+++++. ..+.+.+...-.   -.+.+.+..+       ..-.++|+||.+++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~-------~~~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-------PLYIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-------CCCCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHH-------HHHcCCCEEEECcc
Confidence            689999999999999999988899999998742 222222222111   1233332211       11136999999876


Q ss_pred             h----H-------H-------HHHHHHHhcc-CCEEEEEcCccccc
Q 018013          307 G----D-------M-------FNLCLKALAV-YGRLIVIGMISQYQ  333 (362)
Q Consensus       307 ~----~-------~-------~~~~~~~l~~-~G~~v~~G~~~~~~  333 (362)
                      .    .       .       ....+++++. +-++|.+++..-+.
T Consensus        75 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~  120 (312)
T d2b69a1          75 PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG  120 (312)
T ss_dssp             CCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred             cCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheec
Confidence            2    1       1       1233443333 34899988765553

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.70  E-value=0.27  Score=39.20  Aligned_cols=93  Identities=19%  Similarity=0.239  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCcE--EEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVDR--VINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~~--v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      ++| +||=.| + |.|..+..+++ .|++|++++.+++.++.++    +.+.+.  +...+-..+      .....+|+|
T Consensus        30 ~~g-rvLDiG-c-G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~------~~~~~fD~I   99 (198)
T d2i6ga1          30 APG-RTLDLG-C-GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL------TFDGEYDFI   99 (198)
T ss_dssp             CSC-EEEEET-C-TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC------CCCCCEEEE
T ss_pred             CCC-cEEEEC-C-CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc------cccccccEE
Confidence            455 898888 4 47887777776 5899999999988877664    345542  111111110      123569999


Q ss_pred             EECCCh---------HHHHHHHHHhccCCEEEEEcCcc
Q 018013          302 YESVGG---------DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       302 id~~g~---------~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +....-         ..++.+.++|+++|+++......
T Consensus       100 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~  137 (198)
T d2i6ga1         100 LSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAMD  137 (198)
T ss_dssp             EEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred             EEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence            874321         36778888999999998875544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.66  E-value=0.13  Score=44.84  Aligned_cols=103  Identities=20%  Similarity=0.094  Sum_probs=60.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecC----------CHhHHHHHHHcCC--cEEEeCCCccHHHHHHHHCCCce
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG----------GEHKAQLLKELGV--DRVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~----------~~~~~~~l~~~g~--~~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      ++|||+||+|-+|..++..+...|.+|+++++          ..+..+.+..+..  ..++..+-.+.....+...+..+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            68999999999999999999889999999853          1122333322211  13333322333333332334668


Q ss_pred             eEEEECCCh---H---------------HHHHHHHHhccCC--EEEEEcCccccc
Q 018013          299 DIIYESVGG---D---------------MFNLCLKALAVYG--RLIVIGMISQYQ  333 (362)
Q Consensus       299 Dvvid~~g~---~---------------~~~~~~~~l~~~G--~~v~~G~~~~~~  333 (362)
                      |+++.+++-   .               .....+.+++..|  +|+.++....+.
T Consensus        83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~  137 (346)
T d1ek6a_          83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG  137 (346)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred             ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeee
Confidence            889988762   1               1123445555554  788877655433

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=93.64  E-value=0.11  Score=44.71  Aligned_cols=34  Identities=12%  Similarity=0.169  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      .++|||+||+|-+|..++..+...|..|+++...
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            3689999999999999999999999988877653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.62  E-value=0.12  Score=36.63  Aligned_cols=69  Identities=17%  Similarity=0.204  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEecCC-HhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          228 ASGKKVLVTAAAGGTGQFA-VQLAKLAGNTVVATCGG-EHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~a-iqla~~~G~~Vi~~~~~-~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      +..+++.+.| -||+|+.+ +++++..|++|...+.. ....+.+.+.|+.....+....+         .+.|+|+-+.
T Consensus         6 ~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i---------~~~d~vV~S~   75 (96)
T d1p3da1           6 RRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHI---------EGASVVVVSS   75 (96)
T ss_dssp             TTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGG---------TTCSEEEECT
T ss_pred             hhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccC---------CCCCEEEECC
Confidence            5678899999 78888766 89999999999999975 33456677789865443333221         3478777665


Q ss_pred             C
Q 018013          306 G  306 (362)
Q Consensus       306 g  306 (362)
                      +
T Consensus        76 A   76 (96)
T d1p3da1          76 A   76 (96)
T ss_dssp             T
T ss_pred             C
Confidence            5

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.50  E-value=0.088  Score=42.28  Aligned_cols=82  Identities=15%  Similarity=0.185  Sum_probs=58.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC------cEEEeCC---CccHHHHHHHHCCCceeEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV------DRVINYK---AEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~------~~v~~~~---~~~~~~~~~~~~~~g~Dvv  301 (362)
                      .+|.|.| +|..|.+++.++...|.+|+...++++..+.+.+.+.      +..++.+   ..++.+.+     .+.|++
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~-----~~ad~i   81 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-----NGAEII   81 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-----TTCSCE
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc-----CCCCEE
Confidence            3699999 7999999999998888899999999998888864331      1111111   13344443     357999


Q ss_pred             EECCChHHHHHHHHHhc
Q 018013          302 YESVGGDMFNLCLKALA  318 (362)
Q Consensus       302 id~~g~~~~~~~~~~l~  318 (362)
                      +-++....+...++.++
T Consensus        82 iiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          82 LFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             EECSCHHHHHHHHHHHC
T ss_pred             EEcCcHHHHHHHHHHHH
Confidence            99999877777666544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.35  E-value=0.41  Score=39.42  Aligned_cols=69  Identities=20%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH-HcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      -.|++|+|.| .|.+|..+++++...|++|++++.+..+.+.+. +.|...+ +.  +       +.....+|+++=|+-
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~--~-------~~~~~~cDIl~PcA~  105 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-AP--N-------AIYGVTCDIFAPCAL  105 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CG--G-------GTTTCCCSEEEECSC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CC--c-------ccccccccEeccccc
Confidence            4789999999 899999999999999999999999888877665 4665432 11  1       123456899999876


Q ss_pred             h
Q 018013          307 G  307 (362)
Q Consensus       307 ~  307 (362)
                      +
T Consensus       106 ~  106 (230)
T d1leha1         106 G  106 (230)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.29  E-value=0.089  Score=42.18  Aligned_cols=43  Identities=19%  Similarity=0.021  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE  272 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~  272 (362)
                      .+.+|.|.| .|.+|...++.++.+|.+|+..++........+.
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~   85 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE   85 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc
Confidence            588999999 8999999999999999999999975443333333

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.19  E-value=0.095  Score=41.45  Aligned_cols=50  Identities=20%  Similarity=0.248  Sum_probs=38.6

Q ss_pred             HHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH
Q 018013          220 IALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK  271 (362)
Q Consensus       220 ~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~  271 (362)
                      .+|.+... -+|++|+|.| +||++.+++..+...| +|++..|+.+|.+.+.
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~   57 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALA   57 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHH
Confidence            34444333 6889999999 7999998887776555 9999999999887763

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.16  E-value=0.44  Score=37.32  Aligned_cols=98  Identities=13%  Similarity=0.026  Sum_probs=61.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEecCC--HhHHHHHHHcCCcEEEeCCCccHHHHHHH-HC--------CCcee
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGG--EHKAQLLKELGVDRVINYKAEDIKTVFKE-EF--------PKGFD  299 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~--~~~~~~l~~~g~~~v~~~~~~~~~~~~~~-~~--------~~g~D  299 (362)
                      +|.|.| -|-+|..+++++...+ .+++++...  ......+..++.+......+ .....-.. ..        -.++|
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~v~g~~~~~~~~vD   80 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPE-RVKLFEKAGIEVAGTVDDMLDEAD   80 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGG-GHHHHHHTTCCCCEEHHHHHHTCS
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccc-cceeecccCcccCCChhHhhcCCC
Confidence            689998 8999999999887666 477766432  33445566666654332221 11110000 00        13699


Q ss_pred             EEEECCCh-HHHHHHHHHhccCCEEEEEcCccc
Q 018013          300 IIYESVGG-DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       300 vvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|+||+|. ...+.+-..+..+-+.|..+....
T Consensus        81 vViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~~  113 (171)
T d1cf2o1          81 IVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEKH  113 (171)
T ss_dssp             EEEECCSTTHHHHHHHHHHHTTCEEEECTTSCH
T ss_pred             EEEEccCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            99999995 455666778888888888766543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.14  E-value=0.069  Score=43.26  Aligned_cols=96  Identities=15%  Similarity=0.173  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      .++|||+||+|-+|..++..+...|.  +|++..+++..       .... +.....++.+... .....+|.|++|+|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~-~~~~~~d~~~~~~-~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPR-LDNPVGPLAELLP-QLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTT-EECCBSCHHHHGG-GCCSCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hccc-ccccccchhhhhh-ccccchheeeeeeee
Confidence            37999999999999999998888886  67766654311       0001 1222234443322 234568999999873


Q ss_pred             H----------------HHHHHHHHhccC--CEEEEEcCcccccC
Q 018013          308 D----------------MFNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       308 ~----------------~~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      .                ......+..+..  .+|+.+.....+..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~  117 (212)
T d2a35a1          73 TIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK  117 (212)
T ss_dssp             CHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT
T ss_pred             eccccccccccccchhhhhhhcccccccccccccccccccccccc
Confidence            1                111333444444  58888887665443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.06  E-value=0.11  Score=37.92  Aligned_cols=35  Identities=17%  Similarity=0.190  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      +.+|.|.| +|-+|.++++.|+.+|.++++.+.+++
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            45799999 799999999999999999999998654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.98  E-value=0.19  Score=42.41  Aligned_cols=94  Identities=17%  Similarity=0.113  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      ++|++||-.++  |+|..++.+|+.-+++|++++.+++..+.+++    .|.+   .++..+..++      .....+|.
T Consensus       106 ~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~------~~~~~~D~  177 (260)
T d2frna1         106 KPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF------PGENIADR  177 (260)
T ss_dssp             CTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC------CCCSCEEE
T ss_pred             CCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh------ccCCCCCE
Confidence            78999998873  55666677777655699999999998888753    4543   3443332221      12245886


Q ss_pred             EEEC-C--ChHHHHHHHHHhccCCEEEEEcCc
Q 018013          301 IYES-V--GGDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       301 vid~-~--g~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      |+-. .  +.+.+..+++.+++||.+......
T Consensus       178 Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~~  209 (260)
T d2frna1         178 ILMGYVVRTHEFIPKALSIAKDGAIIHYHNTV  209 (260)
T ss_dssp             EEECCCSSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred             EEECCCCchHHHHHHHHhhcCCCCEEEEEecc
Confidence            6543 2  246888999999999988765543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.92  E-value=0.2  Score=41.44  Aligned_cols=104  Identities=18%  Similarity=0.077  Sum_probs=66.0

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHc----CCcEEEeCCCccHHHHHHHHCCC
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKEL----GVDRVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~----g~~~v~~~~~~~~~~~~~~~~~~  296 (362)
                      +.....+||++||=.|+  |.|..+..+|+... .+|++++.+++..+.+++.    +....+.......... . ....
T Consensus        67 l~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~-~-~~~~  142 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY-A-NIVE  142 (230)
T ss_dssp             CCCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG-T-TTCC
T ss_pred             HHhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccc-c-cccc
Confidence            34444499999999995  34666777777643 5999999999888877653    2222222222221111 0 1123


Q ss_pred             ceeEEEECCCh-----HHHHHHHHHhccCCEEEEEcCc
Q 018013          297 GFDIIYESVGG-----DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       297 g~Dvvid~~g~-----~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      .+|+++.....     ..+..+.+.|+++|+++.+=..
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k~  180 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKA  180 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccCceEEEEeec
Confidence            47777776652     3577888999999998876433

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.73  E-value=0.11  Score=42.58  Aligned_cols=91  Identities=7%  Similarity=0.081  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEecCCHhHHHHHHH----cCCc---EEEeCCCccHHHHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKL---AGNTVVATCGGEHKAQLLKE----LGVD---RVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~---~G~~Vi~~~~~~~~~~~l~~----~g~~---~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      +++.+||=.|.  |.|..+..+++.   .+++|++++.+++-++.+++    .+..   +....+..+       .....
T Consensus        38 ~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~-------~~~~~  108 (225)
T d1im8a_          38 TADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRH-------VEIKN  108 (225)
T ss_dssp             CTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTT-------CCCCS
T ss_pred             CCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhc-------ccccc
Confidence            78899999982  446666666664   57899999999998888764    2322   222221111       12245


Q ss_pred             eeEEEECCCh---------HHHHHHHHHhccCCEEEEEc
Q 018013          298 FDIIYESVGG---------DMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       298 ~Dvvid~~g~---------~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .|+++-+..-         ..++.+.+.|+|+|.++..-
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            6766654331         46889999999999999763

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.67  E-value=0.35  Score=37.08  Aligned_cols=95  Identities=15%  Similarity=0.200  Sum_probs=63.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC--CEEEEecCCHh--H-HHHHHHcCCcEEEeCCCccH---HHHHH-----------
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAG--NTVVATCGGEH--K-AQLLKELGVDRVINYKAEDI---KTVFK-----------  291 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G--~~Vi~~~~~~~--~-~~~l~~~g~~~v~~~~~~~~---~~~~~-----------  291 (362)
                      ++|.|.|++|.+|..+..+.+...  ++|++.+.+..  + .++++++.+..++-.+....   ...+.           
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            479999999999999999999774  57777664322  2 23345788876655443221   11111           


Q ss_pred             ------HHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEE
Q 018013          292 ------EEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       292 ------~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~  325 (362)
                            ......+|+|+.+..| ..+...+..++.+=++.+
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence                  1223468999998654 778888888887766544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.66  E-value=0.12  Score=39.54  Aligned_cols=93  Identities=19%  Similarity=0.111  Sum_probs=52.3

Q ss_pred             CEEEEEcCCchHHHHHHHH-HHHCC---CEEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQFAVQL-AKLAG---NTVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiql-a~~~G---~~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      ++|.|.||+|-+|+-.+++ +.+..   .+++...++..........+-. .+.+.  .+....      .++|++|-|+
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~--~~~~~~------~~~DivF~a~   73 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDA--FDLEAL------KALDIIVTCQ   73 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEET--TCHHHH------HTCSEEEECS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecc--cchhhh------hcCcEEEEec
Confidence            3799999999999999975 54432   3666555543221111111111 11111  111111      3689999999


Q ss_pred             ChHHHHHHHHHhccCC---EEEEEcCccc
Q 018013          306 GGDMFNLCLKALAVYG---RLIVIGMISQ  331 (362)
Q Consensus       306 g~~~~~~~~~~l~~~G---~~v~~G~~~~  331 (362)
                      +.+........+...|   .++..+..-.
T Consensus        74 ~~~~s~~~~~~~~~~g~~~~VID~Ss~fR  102 (146)
T d1t4ba1          74 GGDYTNEIYPKLRESGWQGYWIDAASSLR  102 (146)
T ss_dssp             CHHHHHHHHHHHHHTTCCCEEEECSSTTT
T ss_pred             CchHHHHhhHHHHhcCCCeecccCCcccc
Confidence            9877666666665555   3555544433

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.60  E-value=1.3  Score=37.24  Aligned_cols=100  Identities=14%  Similarity=0.197  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC---CHhHHHHHHHcCCcEEEeCCCccH------------------
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---GEHKAQLLKELGVDRVINYKAEDI------------------  286 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---~~~~~~~l~~~g~~~v~~~~~~~~------------------  286 (362)
                      ++++ .+|..++|-.|++++..|+.+|.+++++..   ++.|.+.++.+|+..++...+.+.                  
T Consensus        58 ~~~~-~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~~~~~  136 (292)
T d2bhsa1          58 KPGD-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKL  136 (292)
T ss_dssp             CTTS-EEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHTSSEE
T ss_pred             CCCc-eeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccccccc
Confidence            4455 455556899999999999999986555543   577888889999975443222110                  


Q ss_pred             -----------------HHHHHHHCCCceeEEEECCCh-H---HHHHHHHHhccCCEEEEEcC
Q 018013          287 -----------------KTVFKEEFPKGFDIIYESVGG-D---MFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       287 -----------------~~~~~~~~~~g~Dvvid~~g~-~---~~~~~~~~l~~~G~~v~~G~  328 (362)
                                       ...+.+..+..+|.++-++|+ .   .+...++...+..+++.+-.
T Consensus       137 ~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         137 LDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             CCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                             011111223458999998874 2   34455566677788776543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.52  E-value=0.036  Score=42.74  Aligned_cols=84  Identities=12%  Similarity=0.053  Sum_probs=52.2

Q ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChHHHHHH
Q 018013          234 LVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLC  313 (362)
Q Consensus       234 lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~  313 (362)
                      -++| +|-+|.+.++.++..+..+.+..++.++.+.+.+.+.....+..+          .-...|+||-|+..+.+...
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~----------~~~~~DiVil~v~d~~i~~v   71 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEK----------HPELNGVVFVIVPDRYIKTV   71 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCC----------CCC---CEEECSCTTTHHHH
T ss_pred             EEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhh----------hhccCcEEEEeccchhhhHH
Confidence            4667 899999988776553333457899999998887765532222211          11347999999988888888


Q ss_pred             HHHhccCC-EEEEEcC
Q 018013          314 LKALAVYG-RLIVIGM  328 (362)
Q Consensus       314 ~~~l~~~G-~~v~~G~  328 (362)
                      ++.|+..| .++.+..
T Consensus        72 ~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          72 ANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             HTTTCCSSCCEEECCS
T ss_pred             Hhhhcccceeeeeccc
Confidence            88887544 4444443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.27  E-value=0.27  Score=38.35  Aligned_cols=93  Identities=17%  Similarity=0.112  Sum_probs=64.3

Q ss_pred             hhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHH
Q 018013          212 LTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF  290 (362)
Q Consensus       212 ~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~  290 (362)
                      |+.....+..|+.... -.|++|+|.|.+.-+|.-+..++...|++|+.+.+..                   .++.+..
T Consensus        18 PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t-------------------~~l~~~~   78 (166)
T d1b0aa1          18 PCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------------KNLRHHV   78 (166)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------------SCHHHHH
T ss_pred             CchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhcccccccccc-------------------chhHHHH
Confidence            3344444555666666 7899999999888899999999999999998775432                   2222222


Q ss_pred             HHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          291 KEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      +     ..|+++-++|.. .+.  -+.++++-.+|.+|...
T Consensus        79 ~-----~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~~  112 (166)
T d1b0aa1          79 E-----NADLLIVAVGKPGFIP--GDWIKEGAIVIDVGINR  112 (166)
T ss_dssp             H-----HCSEEEECSCCTTCBC--TTTSCTTCEEEECCCEE
T ss_pred             h-----hhhHhhhhccCccccc--ccccCCCcEEEecCcee
Confidence            2     368888888842 222  23567888888888754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.15  Score=44.34  Aligned_cols=33  Identities=21%  Similarity=0.353  Sum_probs=29.7

Q ss_pred             CEE-EEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          231 KKV-LVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       231 ~~V-lI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      ++| ||+||+|-+|..++..+...|.+|+++++.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            357 999999999999999998899999999874

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.09  E-value=0.81  Score=39.38  Aligned_cols=97  Identities=22%  Similarity=0.204  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCc--EEEeC-----CCccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVD--RVINY-----KAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~--~v~~~-----~~~~~~~~~~~~~~~g~D  299 (362)
                      ...++|||.|  ||-|..+-.+++..+. +|.++.-+++-.+.++++-..  ..++.     .-.|..+.++. ..+.+|
T Consensus       105 ~~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~yD  181 (312)
T d2b2ca1         105 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFD  181 (312)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEE
T ss_pred             CCCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCCCC
Confidence            5567899999  4556666677787664 899999988888888764211  00111     11344455554 456799


Q ss_pred             EEEECCC-----------hHHHHHHHHHhccCCEEEEEc
Q 018013          300 IIYESVG-----------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       300 vvid~~g-----------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +||--+.           .+.++.+.++|+++|.++.-+
T Consensus       182 vII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         182 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            9985332           146788999999999999764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.04  E-value=0.81  Score=36.15  Aligned_cols=94  Identities=17%  Similarity=0.209  Sum_probs=60.8

Q ss_pred             HhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc----EEEeCCCccHHHHHHHHCC
Q 018013          224 QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD----RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       224 ~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~----~v~~~~~~~~~~~~~~~~~  295 (362)
                      .+...++++||=.|+  |.|..++.+++ .+.+|++++.++...+.+++    .+..    .++..+..+      ...+
T Consensus        47 ~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~------~~~~  117 (194)
T d1dusa_          47 NVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE------NVKD  117 (194)
T ss_dssp             HCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT------TCTT
T ss_pred             hCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh------hhcc
Confidence            344488999999883  44566666665 46799999999887777753    3332    222222111      1224


Q ss_pred             CceeEEEECC----Ch----HHHHHHHHHhccCCEEEEE
Q 018013          296 KGFDIIYESV----GG----DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       296 ~g~Dvvid~~----g~----~~~~~~~~~l~~~G~~v~~  326 (362)
                      +.+|+|+-+.    +.    ..++.+.+.|+++|+++.+
T Consensus       118 ~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         118 RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            5799999743    22    3477888999999998654

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.94  E-value=0.11  Score=44.77  Aligned_cols=96  Identities=19%  Similarity=0.175  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCC---------c-EEEeCCCccHHHHHHHHCC
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGV---------D-RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~---------~-~v~~~~~~~~~~~~~~~~~  295 (362)
                      ....++|||.|  ||-|..+-.+++..+. +|.++.-+++-.+.++++-.         . .++.   .|-.+.++....
T Consensus        78 ~~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~---~Da~~~l~~~~~  152 (290)
T d1xj5a_          78 IPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAFLKNAAE  152 (290)
T ss_dssp             SSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHHHHTSCT
T ss_pred             CCCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE---ccHHHHHhhccc
Confidence            35568999999  3446666677887675 89999998887777766421         1 1221   234455554555


Q ss_pred             CceeEEEECC-C----------hHHHHHHHHHhccCCEEEEEc
Q 018013          296 KGFDIIYESV-G----------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       296 ~g~Dvvid~~-g----------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      +.+|+||--+ .          .+.++.+.++|+++|.++.-.
T Consensus       153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            6799777432 1          247889999999999999754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.92  E-value=0.17  Score=41.86  Aligned_cols=89  Identities=18%  Similarity=0.186  Sum_probs=58.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      .++++||=.| +| .|..+..+++ .|.+|++++.+++-++.+++    .+.. .++..+-.++      ...+.+|+|+
T Consensus        36 ~~~~~vLDiG-CG-~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~------~~~~~fD~i~  106 (246)
T d1y8ca_          36 LVFDDYLDLA-CG-TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL------NINRKFDLIT  106 (246)
T ss_dssp             CCTTEEEEET-CT-TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC------CCSCCEEEEE
T ss_pred             CCCCeEEEEe-Cc-CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhh------cccccccccc
Confidence            5568899888 33 4666666665 48899999999988777653    3433 2332211111      1245799998


Q ss_pred             ECCCh-----------HHHHHHHHHhccCCEEEE
Q 018013          303 ESVGG-----------DMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       303 d~~g~-----------~~~~~~~~~l~~~G~~v~  325 (362)
                      ...+.           ..++.+.++|+++|.|+.
T Consensus       107 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         107 CCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             ECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            64321           257788899999999885

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.82  E-value=0.96  Score=34.10  Aligned_cols=94  Identities=19%  Similarity=0.116  Sum_probs=57.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhHHHHHHHcCCc----EEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHKAQLLKELGVD----RVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~~~~l~~~g~~----~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      +|.|+||+|.+|..++.++...|.  ++..++.++.+.+.+.-.-.+    .-......+..+.+     ++.|+|+-+.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~-----~~aDivVita   76 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL-----KGCDVVVIPA   76 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH-----TTCSEEEECC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh-----CCCCEEEECC
Confidence            689999889999999999998885  788888776654443311111    11111223333322     5689999998


Q ss_pred             Ch---------H-------HHHHHHHH---hccCCEEEEEcCcc
Q 018013          306 GG---------D-------MFNLCLKA---LAVYGRLIVIGMIS  330 (362)
Q Consensus       306 g~---------~-------~~~~~~~~---l~~~G~~v~~G~~~  330 (362)
                      |.         +       .++...+.   -++.+.++.+..+-
T Consensus        77 g~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNPv  120 (144)
T d1mlda1          77 GVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV  120 (144)
T ss_dssp             SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred             CcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence            82         1       22222222   36788998886543

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.81  E-value=0.084  Score=45.27  Aligned_cols=93  Identities=15%  Similarity=0.099  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc------EEEeCCCccHHHHHHHHCCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD------RVINYKAEDIKTVFKEEFPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~------~v~~~~~~~~~~~~~~~~~~g  297 (362)
                      +++++||=.|  -|.|..+..+++. |++|++++.+++-++.+++    .+..      .+.+.+-....  .......+
T Consensus        55 ~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  129 (292)
T d1xvaa_          55 HGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--KDVPAGDG  129 (292)
T ss_dssp             TTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--HHSCCTTC
T ss_pred             cCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccc--cccCCCCC
Confidence            6678999888  3557777888875 8999999999987777653    2221      11111111111  11112457


Q ss_pred             eeEEEECCCh---------------HHHHHHHHHhccCCEEEE
Q 018013          298 FDIIYESVGG---------------DMFNLCLKALAVYGRLIV  325 (362)
Q Consensus       298 ~Dvvid~~g~---------------~~~~~~~~~l~~~G~~v~  325 (362)
                      +|.|+.....               ..++.+.+.|+|||.|+.
T Consensus       130 fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         130 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             EEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             ceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            9999864220               268899999999999886

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.79  E-value=0.24  Score=43.04  Aligned_cols=98  Identities=22%  Similarity=0.215  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc--EEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD--RVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      .+|++||=.++  ++|..++++|+ .+++|++++.++...+.+++    .|.+  .++..+..++.+... ..+..+|+|
T Consensus       144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~-~~~~~fD~V  219 (318)
T d1wxxa2         144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLE-KEGERFDLV  219 (318)
T ss_dssp             CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHH-HTTCCEEEE
T ss_pred             hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhH-hhhcCCCEE
Confidence            46888887762  22334455554 35699999999998887753    5654  223222222222221 235679988


Q ss_pred             EECC---C--h-----------HHHHHHHHHhccCCEEEEEcCc
Q 018013          302 YESV---G--G-----------DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       302 id~~---g--~-----------~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +-..   +  .           +.+..++++|+|||.++.+...
T Consensus       220 i~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         220 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            8532   1  1           2456788899999999987654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.60  E-value=0.91  Score=36.07  Aligned_cols=107  Identities=16%  Similarity=0.193  Sum_probs=68.8

Q ss_pred             HHhCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHH----cCCc-EEEeCCCccHHHHHHHHCCC
Q 018013          223 EQAGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKE----LGVD-RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       223 ~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~----~g~~-~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ..+..++++.+ |.+ +-|.|-.+-.+++.. +++|++++.+++..+.+++    ++.. .++...-.++...+....-.
T Consensus        17 ~~l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~   94 (192)
T d1m6ya2          17 EFLKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIE   94 (192)
T ss_dssp             HHHCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCS
T ss_pred             HhhCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCC
Confidence            33445777744 555 344444444555543 5799999999998888864    3432 34555445666666665556


Q ss_pred             ceeEEEECCCh----------------HHHHHHHHHhccCCEEEEEcCccc
Q 018013          297 GFDIIYESVGG----------------DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       297 g~Dvvid~~g~----------------~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      .+|.|+--.|-                +.+..+.+.|+++|+++.+...+.
T Consensus        95 ~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~s~  145 (192)
T d1m6ya2          95 KVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFHSL  145 (192)
T ss_dssp             CEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESSHH
T ss_pred             CcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccccH
Confidence            78877544441                245677788999999999877664

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.24  E-value=0.36  Score=41.74  Aligned_cols=88  Identities=27%  Similarity=0.265  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHH----HHcCCc---EEEeCCCccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLL----KELGVD---RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l----~~~g~~---~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      .+|++||-.|+ | .|..++.+|+ .|+ +|++++.++. ...+    +..+..   .++..+..++.     .....+|
T Consensus        32 ~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~-----~~~~~~D  102 (316)
T d1oria_          32 FKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE-----LPVEKVD  102 (316)
T ss_dssp             HTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC-----CSSSCEE
T ss_pred             CCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc-----cccceeE
Confidence            68999999983 3 3666665555 586 7999998754 2222    233432   33333322210     1235699


Q ss_pred             EEEECCCh----------HHHHHHHHHhccCCEEE
Q 018013          300 IIYESVGG----------DMFNLCLKALAVYGRLI  324 (362)
Q Consensus       300 vvid~~g~----------~~~~~~~~~l~~~G~~v  324 (362)
                      +|+.....          ..+...-+.|+++|+++
T Consensus       103 ~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         103 IIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             EEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            98764221          24556668999999886

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.22  E-value=0.49  Score=37.28  Aligned_cols=95  Identities=18%  Similarity=0.123  Sum_probs=56.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEecCC--HhHHHHHHHcCCcEEEeCCCccHHHHHHHH----CC------Cce
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGG--EHKAQLLKELGVDRVINYKAEDIKTVFKEE----FP------KGF  298 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~--~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~----~~------~g~  298 (362)
                      +|.|.| .|-+|..+++.+.... .+++++...  ......+...+.......  +.... +...    .+      .++
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~i~v~g~~~~~~~~v   78 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQ--QSIKK-FEESGIPVAGTVEDLIKTS   78 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCG--GGHHH-HHTTTCCCCCCHHHHHHHC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccC--cccee-ccccceecCCchhhhhhcC
Confidence            688998 8999999999988665 588887542  223333344443322111  11111 1000    00      268


Q ss_pred             eEEEECCCh-HHHHHHHHHhccCCEEEEEcCcc
Q 018013          299 DIIYESVGG-DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       299 Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      |+|+||+|. ...+.+-.+++.+-++|..|...
T Consensus        79 DiViecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          79 DIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             CEEEECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            999999995 44556666777666777765543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.16  E-value=0.46  Score=40.79  Aligned_cols=96  Identities=25%  Similarity=0.199  Sum_probs=55.6

Q ss_pred             HHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHH---HHcCCc---EEEeCCCccHHHHHHH
Q 018013          221 ALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLL---KELGVD---RVINYKAEDIKTVFKE  292 (362)
Q Consensus       221 al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l---~~~g~~---~v~~~~~~~~~~~~~~  292 (362)
                      |+.+... .+|++||-.|. | .|..++.+|+ .|+ +|++++.++.-....   ++.+..   .++..+..++.     
T Consensus        26 ai~~~~~~~~~~~VLDiGc-G-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~-----   97 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC-G-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-----   97 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-----
T ss_pred             HHHhccccCCcCEEEEECC-C-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhc-----
Confidence            3444434 78999999983 3 5556665565 576 899999886543222   233432   33433322211     


Q ss_pred             HCCCceeEEEECC-C----h-----HHHHHHHHHhccCCEEE
Q 018013          293 EFPKGFDIIYESV-G----G-----DMFNLCLKALAVYGRLI  324 (362)
Q Consensus       293 ~~~~g~Dvvid~~-g----~-----~~~~~~~~~l~~~G~~v  324 (362)
                      .....+|+|+... +    +     ..+...-+.|+|+|+++
T Consensus        98 ~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          98 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            1235799998632 2    1     22333456899999886

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=91.13  E-value=0.062  Score=42.98  Aligned_cols=95  Identities=13%  Similarity=0.095  Sum_probs=58.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      =+|.|.||+|-+|+-+++++..+-. ++..+.++...-..+.+    +.....  .......    ...-.++|++|-|+
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDL--PNLVAVK----DADFSNVDAVFCCL   79 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCC--CCCBCGG----GCCGGGCSEEEECC
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCcccccccccccccc--ccchhhh----hhhhcccceeeecc
Confidence            4689999999999999999987754 76655543322111211    111000  0000000    01124689999999


Q ss_pred             ChHHHHHHHHHhccCCEEEEEcCccc
Q 018013          306 GGDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       306 g~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      ...........+...+..+....-..
T Consensus        80 p~~~s~~~~~~l~~~~~~v~~~~~~~  105 (183)
T d2cvoa1          80 PHGTTQEIIKGLPQELKIVDLSADFR  105 (183)
T ss_dssp             SSSHHHHHHHTSCSSCEEEECSSTTT
T ss_pred             ccchHHHHHHHHHhcCcccccchhhh
Confidence            98776777788888898887655433

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.01  E-value=0.31  Score=35.43  Aligned_cols=42  Identities=19%  Similarity=0.147  Sum_probs=35.5

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +..+...++++|+|.| +|.+|+-++..++..|.+|.++.+.+
T Consensus        14 ~~~l~~~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHHhhCCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            3444448899999999 79999999999999999999998764

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=90.97  E-value=2.1  Score=33.54  Aligned_cols=104  Identities=22%  Similarity=0.241  Sum_probs=69.8

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      +..++|.. +|-+..|+=|.. ..+++. +.+|++++++++....+++.-..  .++...-.++.+.+....-..+|.|+
T Consensus        14 l~~~~g~~-~vD~T~G~GGhs-~~iL~~-~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl   90 (182)
T d1wg8a2          14 LAVRPGGV-YVDATLGGAGHA-RGILER-GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGIL   90 (182)
T ss_dssp             HTCCTTCE-EEETTCTTSHHH-HHHHHT-TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEE
T ss_pred             cCCCCCCE-EEEeCCCCcHHH-HHHhcc-cCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEE
Confidence            44577775 566644554543 344443 67999999999988887764322  44555556677766655556798776


Q ss_pred             ECCCh----------------HHHHHHHHHhccCCEEEEEcCccc
Q 018013          303 ESVGG----------------DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       303 d~~g~----------------~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      =-.|-                ..+....+.++++|+++.+...+.
T Consensus        91 ~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fhs~  135 (182)
T d1wg8a2          91 ADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFHSL  135 (182)
T ss_dssp             EECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECSHH
T ss_pred             EEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecccc
Confidence            54551                146678889999999999987664

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=90.93  E-value=0.18  Score=42.93  Aligned_cols=94  Identities=19%  Similarity=0.191  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHc-----CC--c---EEEeCCCccHHHHHHHHCCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKEL-----GV--D---RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~-----g~--~---~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ...++|||.|  ||-|..+-.+++..+. +|.++.-+++-.+.++++     ++  +   .++.   .|..+.++. ..+
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~---~D~~~~l~~-~~~  147 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIAK-SEN  147 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHHT-CCS
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe---chHHHHHhh-cCC
Confidence            5568999998  4556667777787765 899999988877777653     22  1   2222   222334443 356


Q ss_pred             ceeEEEECCC-----------hHHHHHHHHHhccCCEEEEEc
Q 018013          297 GFDIIYESVG-----------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       297 g~Dvvid~~g-----------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .+|+|+--..           .+.++.+.++|+++|.|+.-.
T Consensus       148 ~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            7999975321           257899999999999998754

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.92  E-value=0.24  Score=42.13  Aligned_cols=93  Identities=22%  Similarity=0.285  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcC-C------------c---EEEeCCCccHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELG-V------------D---RVINYKAEDIKTVFK  291 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g-~------------~---~v~~~~~~~~~~~~~  291 (362)
                      ...++|||.|+  |-|..+-.+++.-..+|.++.-+++-.+.++++- .            +   +++.   .|..+.++
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~---~Da~~~l~  145 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GDGFEFIK  145 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SCHHHHHH
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE---ChHHHHHh
Confidence            56789999994  3344445556654458999998888777776532 1            1   2222   33344444


Q ss_pred             HHCCCceeEEEE-CCC----------hHHHHHHHHHhccCCEEEEEc
Q 018013          292 EEFPKGFDIIYE-SVG----------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       292 ~~~~~g~Dvvid-~~g----------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .  .+++|+||. ...          .+.++.+-++|+++|.++.-+
T Consensus       146 ~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         146 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            3  467998875 322          246888999999999988653

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.86  E-value=3.4  Score=35.81  Aligned_cols=100  Identities=20%  Similarity=0.245  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC---CHhHHHHHHHcCCcEEEeCCC------c--------------
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---GEHKAQLLKELGVDRVINYKA------E--------------  284 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---~~~~~~~l~~~g~~~v~~~~~------~--------------  284 (362)
                      ++++. +|...+|-.|.+++..|+.+|.+.+++..   +++|.+.++.+|++.+.....      .              
T Consensus        95 ~~~~~-vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~  173 (355)
T d1jbqa_          95 KPGDT-IIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIP  173 (355)
T ss_dssp             CTTCE-EEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHST
T ss_pred             ccCce-EEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHHHhcc
Confidence            55555 55555899999999999999997666543   577888899999975542110      0              


Q ss_pred             ----------c--H--------HHHHHHHCCCceeEEEECCCh-H---HHHHHHHHhccCCEEEEEcCc
Q 018013          285 ----------D--I--------KTVFKEEFPKGFDIIYESVGG-D---MFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       285 ----------~--~--------~~~~~~~~~~g~Dvvid~~g~-~---~~~~~~~~l~~~G~~v~~G~~  329 (362)
                                .  +        .++.+++ +..+|.|+-++|+ .   .+-..++...+.-+++.+...
T Consensus       174 ~~~~~~~~~~~~~~~ag~~t~~~EI~~ql-~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep~  241 (355)
T d1jbqa_         174 NSHILDQYRNASNPLAHYDTTADEILQQC-DGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPE  241 (355)
T ss_dssp             TEECCCTTTCTHHHHHHHHTHHHHHHHHH-TTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred             ccccccccCcccchhhhcccchhhhhhhc-CCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeeccc
Confidence                      0  0        1122222 3458999999984 2   334555666777888876543

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=90.68  E-value=0.49  Score=40.84  Aligned_cols=93  Identities=17%  Similarity=0.270  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHHc------CC--c---EEEeCCCccHHHHHHHHCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKEL------GV--D---RVINYKAEDIKTVFKEEFP  295 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~~------g~--~---~v~~~~~~~~~~~~~~~~~  295 (362)
                      ...++|||.|+  |.|..+-.+++... .+|.++..+++-.+.++++      +.  +   .++.   .|..+.++. .+
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~---~Da~~~l~~-~~  149 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---DDARAYLER-TE  149 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SCHHHHHHH-CC
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE---chHHHHhhh-cC
Confidence            55689999994  44666667777665 4899999988877777653      11  0   2221   344455544 45


Q ss_pred             CceeEEEECC----C----------hHHHHHHHHHhccCCEEEEE
Q 018013          296 KGFDIIYESV----G----------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       296 ~g~Dvvid~~----g----------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      +.+|+||--.    +          .+.++.+.++|+++|.++.-
T Consensus       150 ~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             CcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            6799987422    2          14678899999999998864

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=90.51  E-value=0.28  Score=40.00  Aligned_cols=98  Identities=19%  Similarity=0.199  Sum_probs=62.1

Q ss_pred             HHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCc--EEEeCCCccHHHHHHHHCCC
Q 018013          220 IALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVD--RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       220 ~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~--~v~~~~~~~~~~~~~~~~~~  296 (362)
                      +.++.... -++++||=.|  .|.|..+..+++ .|.+|++++.+++..+.+++...+  .++....+++      ...+
T Consensus        10 ~~~~~~~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~------~~~~   80 (225)
T d2p7ia1          10 FMVRAFTPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA------QLPR   80 (225)
T ss_dssp             HHHHHHGGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC------CCSS
T ss_pred             HHHHHhhhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccccc------cccc
Confidence            34444444 5567899888  345766666654 588999999999999888754332  2232221211      1245


Q ss_pred             ceeEEEECCC-------hHHHHHHH-HHhccCCEEEEE
Q 018013          297 GFDIIYESVG-------GDMFNLCL-KALAVYGRLIVI  326 (362)
Q Consensus       297 g~Dvvid~~g-------~~~~~~~~-~~l~~~G~~v~~  326 (362)
                      .+|+|+-.--       ...+.... ++|+++|.++..
T Consensus        81 ~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          81 RYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            6999985432       13455665 679999998864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.39  E-value=0.13  Score=43.14  Aligned_cols=33  Identities=30%  Similarity=0.270  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      +++|+|+| +|..|++++..++..|.+|.++..+
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            58899999 7999999999999999999999864

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.39  E-value=1.6  Score=33.73  Aligned_cols=93  Identities=18%  Similarity=0.250  Sum_probs=53.6

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH----HcCCc-EEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTA-AAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK----ELGVD-RVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~g-a~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~----~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      ..|.+||=.+ |+|.+|   +. |...|++|+.++.+++..+.++    .++.. .+...+...+.. .....+..+|+|
T Consensus        40 ~~g~~vLDl~~G~G~~~---i~-a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~-~~~~~~~~fD~I  114 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVG---LE-AASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLP-EAKAQGERFTVA  114 (171)
T ss_dssp             TTCCEEEEETCSSCHHH---HH-HHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHH-HHHHTTCCEEEE
T ss_pred             cCCCeEEEeccccchhh---hh-hhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccc-cccccCCcccee
Confidence            5666776554 344444   33 3346999999999988877764    36664 444333222222 222345679999


Q ss_pred             EECC----C-hHHHHHHH--HHhccCCEEEE
Q 018013          302 YESV----G-GDMFNLCL--KALAVYGRLIV  325 (362)
Q Consensus       302 id~~----g-~~~~~~~~--~~l~~~G~~v~  325 (362)
                      |-.-    + .+.+...+  ..++++|.++.
T Consensus       115 f~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         115 FMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             EECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             EEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            8532    2 23344433  35888887764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=90.33  E-value=0.1  Score=44.11  Aligned_cols=61  Identities=13%  Similarity=0.199  Sum_probs=37.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCC-ccHHHHHHHHCCCceeEEEECCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~-~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|||+||+|-+|..++..+...|. +++++.....      +    ..|..+ +.+.+.++.   .++|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------~----~~Dl~~~~~~~~~i~~---~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------F----CGDFSNPKGVAETVRK---LRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------S----CCCTTCHHHHHHHHHH---HCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------c----cCcCCCHHHHHHHHHH---cCCCEEEEecc
Confidence            699999999999999988877765 4444443221      0    112222 223333332   35799999986

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.06  E-value=0.32  Score=38.84  Aligned_cols=39  Identities=31%  Similarity=0.212  Sum_probs=34.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL  270 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l  270 (362)
                      ++|.|.| +|-+|...++++...|.+|+..+.+++..+.+
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            5899999 69999999999999999999999998766554

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.05  E-value=0.14  Score=37.87  Aligned_cols=35  Identities=17%  Similarity=0.010  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      +..++++|.| +|.+|+-+++.++.+|.+|.++.++
T Consensus        18 ~~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          18 YCPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SCCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             cCCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            4557899999 6999999999999999999998764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=90.02  E-value=0.64  Score=36.19  Aligned_cols=43  Identities=16%  Similarity=0.007  Sum_probs=37.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGV  275 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~  275 (362)
                      +|.|+| .|.+|...+.-+...|.+|++.++++++.+.+.+.+.
T Consensus         3 kIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC
Confidence            478888 8999999998888899999999999999988866543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.01  E-value=0.12  Score=40.94  Aligned_cols=34  Identities=15%  Similarity=0.114  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCH
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGE  264 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~  264 (362)
                      +++|+|+| +|..|+.++..++..|+ .|++..+++
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            68999999 79999999999999998 588887653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.99  E-value=0.44  Score=37.26  Aligned_cols=93  Identities=14%  Similarity=0.075  Sum_probs=62.4

Q ss_pred             hhhHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHH
Q 018013          212 LTSGLTASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVF  290 (362)
Q Consensus       212 ~~~~~tA~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~  290 (362)
                      |+.....+..|+.... -.|++|.|.|.+.-+|.-++.++...|++|+.+.......                   .+..
T Consensus        20 PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l-------------------~~~~   80 (170)
T d1a4ia1          20 PCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL-------------------DEEV   80 (170)
T ss_dssp             CHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH-------------------HHHH
T ss_pred             CChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH-------------------HHHH
Confidence            3444455556666666 7899999999888899999999999999999877643221                   1111


Q ss_pred             HHHCCCceeEEEECCChH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          291 KEEFPKGFDIIYESVGGD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       291 ~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                           +..|+++-++|.. .+.  -+.++++-.++.+|...
T Consensus        81 -----~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~~  114 (170)
T d1a4ia1          81 -----NKGDILVVATGQPEMVK--GEWIKPGAIVIDCGINY  114 (170)
T ss_dssp             -----TTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCBC
T ss_pred             -----hhccchhhccccccccc--cccccCCCeEeccCccc
Confidence                 2367777777742 222  23567777777777643

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.80  E-value=0.22  Score=42.57  Aligned_cols=96  Identities=24%  Similarity=0.260  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCC---------c-EEEeCCCccHHHHHHHHC
Q 018013          226 GPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGV---------D-RVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       226 ~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~---------~-~v~~~~~~~~~~~~~~~~  294 (362)
                      .....++|||.|  ||-|..+-.+++..+. +|.++.-+++-.+.++++-.         . .++.   .|..+.++. .
T Consensus        75 ~~~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~---~Da~~~l~~-~  148 (285)
T d2o07a1          75 SHPNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMKQ-N  148 (285)
T ss_dssp             TSSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHT-C
T ss_pred             hCcCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE---ccHHHHHhc-C
Confidence            335668999999  3446666677777654 89999888887777765321         1 2221   334444443 4


Q ss_pred             CCceeEEEECCC-----------hHHHHHHHHHhccCCEEEEEc
Q 018013          295 PKGFDIIYESVG-----------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       295 ~~g~Dvvid~~g-----------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .+.+|+|+--.-           .+.++.+-++|+++|.++.-.
T Consensus       149 ~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         149 QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            567998874321           146888999999999998753

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.69  E-value=1.4  Score=34.31  Aligned_cols=81  Identities=14%  Similarity=0.022  Sum_probs=52.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh--HHHHHHHcCCc---------EEEeCCCccHHHHHHHHCCCceeE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH--KAQLLKELGVD---------RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~--~~~~l~~~g~~---------~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +|.|.| +|..|.+.+..+...|.+|....+..+  ..+.+.+....         ..+. ...++.+.+     .+.|+
T Consensus         2 kI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~-~~~~~~~~~-----~~ad~   74 (180)
T d1txga2           2 IVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIF-WPEQLEKCL-----ENAEV   74 (180)
T ss_dssp             EEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEE-CGGGHHHHH-----TTCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhcccccc-ccccHHHHH-----hccch
Confidence            688999 799999999888888999999987433  34444321110         0111 113333332     35899


Q ss_pred             EEECCChHHHHHHHHHhcc
Q 018013          301 IYESVGGDMFNLCLKALAV  319 (362)
Q Consensus       301 vid~~g~~~~~~~~~~l~~  319 (362)
                      |+.++....+...++.+.+
T Consensus        75 Ii~avps~~~~~~~~~l~~   93 (180)
T d1txga2          75 VLLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             EEECSCGGGHHHHHHHHTT
T ss_pred             hhcccchhhhHHHHHhhcc
Confidence            9999998766666665544

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=89.60  E-value=0.79  Score=38.64  Aligned_cols=92  Identities=20%  Similarity=0.249  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHHH----cCCcEEE-eCCCccHHHHHHHHCCCceeE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLKE----LGVDRVI-NYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~~----~g~~~v~-~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      .++.+||=.| + |.|..+..+++..  +++|++++.+++-.+.+++    .+.+.-+ ..+..++      .....+|+
T Consensus        26 ~~~~~ILDiG-c-G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~------~~~~~fD~   97 (281)
T d2gh1a1          26 TKPVHIVDYG-C-GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI------ELNDKYDI   97 (281)
T ss_dssp             CSCCEEEEET-C-TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC------CCSSCEEE
T ss_pred             CCcCEEEEec-C-cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc------cccCCceE
Confidence            6778898887 4 4588888888865  4699999999988777753    3443222 2221111      12346999


Q ss_pred             EEECCC-------hHHHHHHHHHhccCCEEEEEc
Q 018013          301 IYESVG-------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       301 vid~~g-------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      |+....       ...++.+.+.|++||.++..-
T Consensus        98 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          98 AICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            987643       146889999999999998765

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=89.40  E-value=2.2  Score=31.97  Aligned_cols=95  Identities=12%  Similarity=0.006  Sum_probs=60.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHH----HHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQ----LLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~----~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      .+.++|.| .|.+|..+++.+...|.+|++++.++++..    .+...|...+ ..+..+ .+.+++..-..+|.++-++
T Consensus         3 knHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~~d-~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSND-SSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTS-HHHHHHHTTTTCSEEEECS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEE-EccCcc-hHHHHHhccccCCEEEEcc
Confidence            34688888 699999999999999999999988765432    2233455443 333222 2344445446689999998


Q ss_pred             ChHHH----HHHHHHhccCCEEEEEc
Q 018013          306 GGDMF----NLCLKALAVYGRLIVIG  327 (362)
Q Consensus       306 g~~~~----~~~~~~l~~~G~~v~~G  327 (362)
                      +.+..    -...+.+.+.-+++..-
T Consensus        80 ~~d~~n~~~~~~~r~~~~~~~iia~~  105 (153)
T d1id1a_          80 DNDADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             SCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             ccHHHHHHHHHHHHHhCCCCceEEEE
Confidence            86422    22334455665655543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=89.37  E-value=0.17  Score=44.68  Aligned_cols=30  Identities=27%  Similarity=0.238  Sum_probs=25.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEE-EEec
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTV-VATC  261 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~V-i~~~  261 (362)
                      +|||+||+|-+|..++..+...|.+| ++++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            69999999999999999888888864 4444

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.35  E-value=0.15  Score=34.50  Aligned_cols=34  Identities=24%  Similarity=0.188  Sum_probs=30.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      ++|.|.| +|-+|.+.++.++.+|.++.+.+.+++
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            5799999 799999999999999999999987543

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=89.30  E-value=1.4  Score=38.02  Aligned_cols=108  Identities=16%  Similarity=0.184  Sum_probs=67.8

Q ss_pred             HHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC---CHhHHHHHHHcCCcEEEeCCCcc-H------
Q 018013          218 ASIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---GEHKAQLLKELGVDRVINYKAED-I------  286 (362)
Q Consensus       218 A~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---~~~~~~~l~~~g~~~v~~~~~~~-~------  286 (362)
                      |++.+..... .+..+|+. ..+|..|.+++..++..|.+++++..   +.+|.+.++.+|++.++...+.+ .      
T Consensus        62 a~~~i~~~~~~~~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhh
Confidence            4455555554 44444444 44789999999999999997666654   46678888899997654322210 0      


Q ss_pred             -------------------------HHHHHHHCCCceeEEEECCCh-H---HHHHHHHHhccCCEEEEEc
Q 018013          287 -------------------------KTVFKEEFPKGFDIIYESVGG-D---MFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       287 -------------------------~~~~~~~~~~g~Dvvid~~g~-~---~~~~~~~~l~~~G~~v~~G  327 (362)
                                               ...+.+. ...+|.||-++|+ .   .+...++.+.+.-+++.+-
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                                     0111111 2358999999884 2   3345556667778888774

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.09  E-value=0.45  Score=38.55  Aligned_cols=95  Identities=16%  Similarity=0.163  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHc----CCc--EEEeCCCccHHHHHHHHCCCceeEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKEL----GVD--RVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~----g~~--~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      .++.+||=.|  .|.|..+..+++..+.+|++++.+++-.+.+++.    +..  .++..+-.++.     .....+|+|
T Consensus        59 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~-----~~~~~fD~I  131 (222)
T d2ex4a1          59 TGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-----PEPDSYDVI  131 (222)
T ss_dssp             CCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-----CCSSCEEEE
T ss_pred             CCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccccccccc-----ccccccccc
Confidence            6778899988  4667778887777777999999999988888653    222  22222211110     123569999


Q ss_pred             EECCC-----h----HHHHHHHHHhccCCEEEEEcCc
Q 018013          302 YESVG-----G----DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       302 id~~g-----~----~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +....     .    ..++.+.+.|+++|.++..-..
T Consensus       132 ~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~~  168 (222)
T d2ex4a1         132 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM  168 (222)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ccccccccchhhhhhhHHHHHHHhcCCcceEEEEEcc
Confidence            87533     2    3677888999999999987443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.05  E-value=0.23  Score=41.01  Aligned_cols=34  Identities=18%  Similarity=0.132  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      ..++|+|+| +|..|++++..++..|.+|+++.++
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            357899999 7999999999999999999999864

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=88.84  E-value=0.81  Score=37.99  Aligned_cols=103  Identities=17%  Similarity=0.123  Sum_probs=66.8

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcC-CcEEEeCCCccHHHHHHHHCCCceeE
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELG-VDRVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g-~~~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      |......++.+||=.|  .|.|..+..++.....+|++++.+++-.+.+++.- ....++....++.+.  ....+.+|+
T Consensus        86 l~~l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~  161 (254)
T d1xtpa_          86 IASLPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA--TLPPNTYDL  161 (254)
T ss_dssp             HHTSTTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC--CCCSSCEEE
T ss_pred             HhhCCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEcccccc--ccCCCccce
Confidence            3444447788888888  46688888888776779999999999888887532 111111111111110  012356999


Q ss_pred             EEECCC-----h----HHHHHHHHHhccCCEEEEEcC
Q 018013          301 IYESVG-----G----DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       301 vid~~g-----~----~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      |+....     .    ..++.+.+.|+++|.|+..-.
T Consensus       162 I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            987643     1    347788999999999987543

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.79  E-value=0.2  Score=40.85  Aligned_cols=96  Identities=16%  Similarity=0.106  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEecCCHhHHHHHH----HcCCcEEEeCCCccHHHHHHH---H-CCCc
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA--GNTVVATCGGEHKAQLLK----ELGVDRVINYKAEDIKTVFKE---E-FPKG  297 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~--G~~Vi~~~~~~~~~~~l~----~~g~~~v~~~~~~~~~~~~~~---~-~~~g  297 (362)
                      .+.++||=+|  ++.|..++.+|+.+  +.+|+.++.+++..+.++    ..|...-+.....+..+.+..   . ....
T Consensus        55 ~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~  132 (214)
T d2cl5a1          55 YSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT  132 (214)
T ss_dssp             HCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCC
T ss_pred             hCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccc
Confidence            4557899998  45677778888865  579999999888776664    456531111111222232222   2 2356


Q ss_pred             eeEEEECCChH------HHHHHHHHhccCCEEEE
Q 018013          298 FDIIYESVGGD------MFNLCLKALAVYGRLIV  325 (362)
Q Consensus       298 ~Dvvid~~g~~------~~~~~~~~l~~~G~~v~  325 (362)
                      +|++|--...+      .+..++++|++||.+|.
T Consensus       133 ~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         133 LDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            99887544322      24456677999997664

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.35  E-value=0.42  Score=35.02  Aligned_cols=37  Identities=22%  Similarity=0.111  Sum_probs=32.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          227 PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       227 ~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      ...+++|+|.| +|.+|+-+++.+..+|.+|.++.+.+
T Consensus        27 ~~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            36778999999 79999999999999999999987754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.32  E-value=0.34  Score=35.05  Aligned_cols=37  Identities=19%  Similarity=0.088  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      +..++++|.| +|.+|.-+++.+..+|.+|.++.+.+.
T Consensus        20 ~~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            5568999999 699999999999999999999987643

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=88.21  E-value=0.65  Score=39.72  Aligned_cols=101  Identities=18%  Similarity=0.168  Sum_probs=56.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCE------EEEecCC--HhHHHHHHHcCC---cEEEeCCCccHHHHHHHHCCCceeE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNT------VVATCGG--EHKAQLLKELGV---DRVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~------Vi~~~~~--~~~~~~l~~~g~---~~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +|||+||+|-+|..++..+...|.+      ++..+..  ..+...+.....   -.++..+..+......  .....|+
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~~d~   79 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAR--ELRGVDA   79 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHH--HTTTCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhc--cccccce
Confidence            6999999999999999988887754      4444321  111111222221   1334444333332221  2356899


Q ss_pred             EEECCChH-----------H-------HHHHHHHhccC--CEEEEEcCcccccC
Q 018013          301 IYESVGGD-----------M-------FNLCLKALAVY--GRLIVIGMISQYQG  334 (362)
Q Consensus       301 vid~~g~~-----------~-------~~~~~~~l~~~--G~~v~~G~~~~~~~  334 (362)
                      |+.+++..           .       ....++.....  -+||.+++...+..
T Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~  133 (322)
T d1r6da_          80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGS  133 (322)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCC
T ss_pred             EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecC
Confidence            99887521           1       12334444433  48999998877654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.21  E-value=1.7  Score=32.69  Aligned_cols=39  Identities=18%  Similarity=0.197  Sum_probs=31.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK  271 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~  271 (362)
                      +|.|+| .|-+|...+.-+...|.+|++..+++.+...++
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            578888 899999999999999999999887665554443

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=88.09  E-value=0.51  Score=39.03  Aligned_cols=32  Identities=28%  Similarity=0.263  Sum_probs=27.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCG  262 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~  262 (362)
                      +.+|+|.| +||+|..++..+...|. +++.++.
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            47899999 89999999999999998 7887764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.05  E-value=0.23  Score=39.98  Aligned_cols=87  Identities=22%  Similarity=0.207  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          229 SGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       229 ~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      .|++|.|.| .|.+|+.++++++.+|++|++.++...+..   ....    .  ..++.+.+..     .|++.-++.. 
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~---~~~~----~--~~~l~~l~~~-----~D~v~~~~plt  108 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD---HPDF----D--YVSLEDLFKQ-----SDVIDLHVPGI  108 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC---CTTC----E--ECCHHHHHHH-----CSEEEECCCCC
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchhh---hcch----h--HHHHHHHHHh-----cccceeeeccc
Confidence            468999999 899999999999999999999987543210   0000    1  1234444332     5777776542 


Q ss_pred             -H----HHHHHHHHhccCCEEEEEcCcc
Q 018013          308 -D----MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 -~----~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                       +    .-...++.|+++..+|.++.-+
T Consensus       109 ~~T~~li~~~~l~~mk~~a~lIN~aRG~  136 (199)
T d1dxya1         109 EQNTHIINEAAFNLMKPGAIVINTARPN  136 (199)
T ss_dssp             GGGTTSBCHHHHHHSCTTEEEEECSCTT
T ss_pred             ccccccccHHHhhccCCceEEEecccHh
Confidence             1    2245677888888888877643

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=88.00  E-value=0.89  Score=37.47  Aligned_cols=91  Identities=15%  Similarity=0.110  Sum_probs=59.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH----cCCc-EE--EeCC--CccHHHHHHHHCCCce
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE----LGVD-RV--INYK--AEDIKTVFKEEFPKGF  298 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~----~g~~-~v--~~~~--~~~~~~~~~~~~~~g~  298 (362)
                      +++++||=.| +| .|..+..+++.-..+|++++.+++.++.+++    .+.. .+  +..+  ...+      ..++.+
T Consensus        23 ~~~~~VLDlG-CG-~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~------~~~~~f   94 (252)
T d1ri5a_          23 KRGDSVLDLG-CG-KGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM------DLGKEF   94 (252)
T ss_dssp             CTTCEEEEET-CT-TTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC------CCSSCE
T ss_pred             CCcCEEEEec-cc-CcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc------cccccc
Confidence            7889999998 33 3556677777655689999999998888753    3332 21  1111  1110      124569


Q ss_pred             eEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Q 018013          299 DIIYESVGG-----------DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       299 Dvvid~~g~-----------~~~~~~~~~l~~~G~~v~~  326 (362)
                      |+|+....-           ..++.+.+.|++||+|+..
T Consensus        95 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          95 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             eEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            999875431           2456778899999998863

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=87.98  E-value=1.2  Score=34.08  Aligned_cols=89  Identities=12%  Similarity=0.012  Sum_probs=53.9

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHC-CCEEEEecCCHhHHHHHH-HcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh-
Q 018013          232 KVLVTAAAGGTGQF-AVQLAKLA-GNTVVATCGGEHKAQLLK-ELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG-  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~-aiqla~~~-G~~Vi~~~~~~~~~~~l~-~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-  307 (362)
                      +|.|+| +|.+|.. .+...+.. +.++++++.++++.+.+. +++...+++.    +.+.+    ...+|+|+-|+.. 
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~----~~~ll----~~~iD~V~I~tp~~   73 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTD----YRDVL----QYGVDAVMIHAATD   73 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSS----TTGGG----GGCCSEEEECSCGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccccc----HHHhc----ccccceeccccccc
Confidence            688999 7999864 56666555 458888888888777664 5776543322    22221    1247888888775 


Q ss_pred             HHHHHHHHHhccCCEEEEEcCcc
Q 018013          308 DMFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 ~~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      ...+.+..++..| .=|.+..+-
T Consensus        74 ~H~~~~~~al~~g-k~V~~EKP~   95 (167)
T d1xeaa1          74 VHSTLAAFFLHLG-IPTFVDKPL   95 (167)
T ss_dssp             GHHHHHHHHHHTT-CCEEEESCS
T ss_pred             ccccccccccccc-cccccCCCC
Confidence            3455555555544 334454433

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.51  E-value=0.85  Score=34.77  Aligned_cols=112  Identities=16%  Similarity=0.118  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEecCCHhHHHHHHHcCCc-EEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLAGN---TVVATCGGEHKAQLLKELGVD-RVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~G~---~Vi~~~~~~~~~~~l~~~g~~-~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      |-+|.|.||+|-+|+-+++++..+..   ++...+++...-+.+...... ...+..+.+         -...|++|-+.
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~---------~~~~d~~f~~~   71 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETA---------FEGVDIALFSA   71 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTT---------TTTCSEEEECS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhh---------hhhhhhhhhcc
Confidence            45899999999999999999987753   454444432111111001101 111111111         24589999999


Q ss_pred             ChH-HHHHHHHHhccCCEEEEEcCcccccCCCCCCCCChhhHHHHHHhc
Q 018013          306 GGD-MFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAK  353 (362)
Q Consensus       306 g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~k  353 (362)
                      +.. ..+...+.+..+-++|..+.--...+.   .+...|.+....+.+
T Consensus        72 ~~~~s~~~~~~~~~~~~~VIDlSsdfR~~~~---~~~~~pe~n~~~~~~  117 (154)
T d2gz1a1          72 GSSTSAKYAPYAVKAGVVVVDNTSYFRQNPD---VPLVVPEVNAHALDA  117 (154)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEECSSTTTTCTT---SCBCCHHHHGGGGGG
T ss_pred             CccchhhHHhhhccccceehhcChhhhccCC---cccccchhhHHHhcC
Confidence            964 445555667778888887665443332   223345444333333

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.46  E-value=3.2  Score=31.09  Aligned_cols=38  Identities=29%  Similarity=0.258  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEecCCHhH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN--TVVATCGGEHK  266 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~--~Vi~~~~~~~~  266 (362)
                      ..+.+|.|+| +|.+|..++..+...|.  ++..++.++++
T Consensus         4 ~~~~KI~IiG-aG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIG-AGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            5678999999 59999998888887774  89999988776

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=87.35  E-value=0.76  Score=38.04  Aligned_cols=92  Identities=24%  Similarity=0.310  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHH----HHcCCc---EEEeCCCccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLL----KELGVD---RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l----~~~g~~---~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      ...++||=.|  +|.|..+..+++.. +.++++++. ++..+.+    .+.|..   ..+..+   +.    .....++|
T Consensus        79 ~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D---~~----~~~~~~~D  148 (253)
T d1tw3a2          79 TNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGD---FF----EPLPRKAD  148 (253)
T ss_dssp             TTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECC---TT----SCCSSCEE
T ss_pred             ccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhcccc---ch----hhcccchh
Confidence            6778999888  56788888999877 468888886 3334433    334432   122111   10    01235689


Q ss_pred             EEEECCC-----h----HHHHHHHHHhccCCEEEEEcCc
Q 018013          300 IIYESVG-----G----DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       300 vvid~~g-----~----~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +|+-+..     .    ..++.+.+.|+|||+++.+-..
T Consensus       149 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~~  187 (253)
T d1tw3a2         149 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD  187 (253)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             heeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEecc
Confidence            9886533     1    3578899999999999987653

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.28  E-value=0.99  Score=40.01  Aligned_cols=53  Identities=19%  Similarity=0.208  Sum_probs=40.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC---CHhHHHHHHHcCCcEEEeC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---GEHKAQLLKELGVDRVINY  281 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---~~~~~~~l~~~g~~~v~~~  281 (362)
                      +++.+ +|...+|-.|++++..|+.+|.+++++..   ++.|.+.++.+|++.+...
T Consensus       142 ~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~  197 (382)
T d1wkva1         142 EKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDP  197 (382)
T ss_dssp             CTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred             CCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecC
Confidence            66664 55566899999999999999997666543   5678888899999866543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.25  E-value=0.36  Score=39.47  Aligned_cols=35  Identities=29%  Similarity=0.296  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      +.+++|+|+| +|..|+.++..++..|.+|.++..+
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeec
Confidence            6789999999 7999999999999999999999864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.17  E-value=0.47  Score=34.69  Aligned_cols=36  Identities=14%  Similarity=0.030  Sum_probs=31.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +..++++|.| +|.+|+-+++++..+|.+|.++.+.+
T Consensus        21 ~~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          21 EIPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            4558999999 69999999999999999999998754

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.14  E-value=0.34  Score=40.65  Aligned_cols=49  Identities=18%  Similarity=0.074  Sum_probs=34.2

Q ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH
Q 018013          222 LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE  272 (362)
Q Consensus       222 l~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~  272 (362)
                      +...+...|+++|=.| +|. |...+..+.....+|++++-++.-.+.+++
T Consensus        47 ~f~~g~~~g~~vLDiG-cG~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          47 TFATGEVSGRTLIDIG-SGP-TVYQLLSACSHFEDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             HHHTSCSCCSEEEEET-CTT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHH
T ss_pred             HcCCCCCCCcEEEEec-cCC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHH
Confidence            3344557899999998 443 444444444455699999999998888864

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.13  E-value=0.94  Score=38.64  Aligned_cols=94  Identities=18%  Similarity=0.255  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCC-------c---EEEeCCCccHHHHHHHHCCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGV-------D---RVINYKAEDIKTVFKEEFPK  296 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~-------~---~v~~~~~~~~~~~~~~~~~~  296 (362)
                      ...++|||.|+  |-|..+-.+++..+. +|.++..+++-.+.++++-.       +   .++.   .|..+.+++ ..+
T Consensus        88 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~---~Da~~~l~~-~~~  161 (295)
T d1inla_          88 PNPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEYVRK-FKN  161 (295)
T ss_dssp             SSCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHGGG-CSS
T ss_pred             CCCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh---hhHHHHHhc-CCC
Confidence            45689999994  445556677777664 89999998887777765321       1   2221   333444443 346


Q ss_pred             ceeEEEECC-----C-------hHHHHHHHHHhccCCEEEEEc
Q 018013          297 GFDIIYESV-----G-------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       297 g~Dvvid~~-----g-------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                      .+|+||--.     +       .+.++.+.++|+++|.|+.-.
T Consensus       162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            799887421     1       257889999999999998754

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.13  E-value=0.12  Score=39.38  Aligned_cols=92  Identities=14%  Similarity=0.069  Sum_probs=52.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCC---CEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAG---NTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G---~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      -+|.|.||+|-+|+-+++++..++   .++....++...-+.+...+.+..+    .+.    ....-.++|++|-|++.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~----~~~----~~~~~~~~d~vf~a~p~   74 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRV----GDV----DSFDFSSVGLAFFAAAA   74 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEEC----EEG----GGCCGGGCSEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchh----ccc----hhhhhccceEEEecCCc
Confidence            469999999999999999997543   4666655543211111111111110    000    01112468999999997


Q ss_pred             HHHHHHH-HHhccCCEEEEEcCcc
Q 018013          308 DMFNLCL-KALAVYGRLIVIGMIS  330 (362)
Q Consensus       308 ~~~~~~~-~~l~~~G~~v~~G~~~  330 (362)
                      ....... .....+-+++..+..-
T Consensus        75 ~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          75 EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             chhhhhccccccCCceEEeechhh
Confidence            6555544 4455666777665543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=86.94  E-value=0.053  Score=42.53  Aligned_cols=92  Identities=21%  Similarity=0.186  Sum_probs=55.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHHHc----CCc----EEEeCCCccHHHHHHHHCCCceeEE
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLKEL----GVD----RVINYKAEDIKTVFKEEFPKGFDII  301 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~~~----g~~----~v~~~~~~~~~~~~~~~~~~g~Dvv  301 (362)
                      =+|.|+|++|-+|+++++++... ++++++....+.....-+..    |..    .+.+.. +        ..-..+|++
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~-~--------~~~~~~DVi   75 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSL-D--------AVKDDFDVF   75 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCS-T--------TTTTSCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccH-H--------HHhcccceE
Confidence            37899999999999999988765 55665544322211000000    100    011100 0        011357899


Q ss_pred             EECCChHHHHHHHHHhccCCEEEEEcCccc
Q 018013          302 YESVGGDMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       302 id~~g~~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                      +|.+-.+.....++.....|.=+.+|..+-
T Consensus        76 IDFs~p~~~~~~~~~a~~~~~~~ViGTTG~  105 (162)
T d1diha1          76 IDFTRPEGTLNHLAFCRQHGKGMVIGTTGF  105 (162)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEeccHHHHHHHHHHHHhccceeEEecCCC
Confidence            998888777777777777777777887664

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.88  E-value=6.1  Score=33.46  Aligned_cols=52  Identities=25%  Similarity=0.366  Sum_probs=40.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec---CCHhHHHHHHHcCCcEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC---GGEHKAQLLKELGVDRVI  279 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~---~~~~~~~~l~~~g~~~v~  279 (362)
                      +++...+|...+|..|++++..++.+|.+.+++.   .++.|.+.++.+|++.++
T Consensus        62 ~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~  116 (320)
T d1z7wa1          62 KPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVL  116 (320)
T ss_dssp             CTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             CCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEE
Confidence            5666677777799999999999999998655554   356788888899987543

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=86.81  E-value=0.34  Score=36.99  Aligned_cols=96  Identities=19%  Similarity=0.105  Sum_probs=52.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-C---CCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCCh
Q 018013          232 KVLVTAAAGGTGQFAVQLAKL-A---GNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGG  307 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~-~---G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  307 (362)
                      +|.|.||+|-+|+-+++++.. .   ..++....++....... .++-+........+... .     ..+|++|-|+++
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-~~~~~~~~~~~~~~~~~-~-----~~~DvvF~alp~   74 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-NFGKDAGMLHDAFDIES-L-----KQLDAVITCQGG   74 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-CSSSCCCBCEETTCHHH-H-----TTCSEEEECSCH
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-ccCCcceeeecccchhh-h-----ccccEEEEecCc
Confidence            689999999999999986542 2   24666554432211100 11111100000111111 1     468999999998


Q ss_pred             HHHHHHHHHhccCC---EEEEEcCcccccC
Q 018013          308 DMFNLCLKALAVYG---RLIVIGMISQYQG  334 (362)
Q Consensus       308 ~~~~~~~~~l~~~G---~~v~~G~~~~~~~  334 (362)
                      +........+...|   .+|..+.--...+
T Consensus        75 ~~s~~~~~~l~~~g~~~~VIDlSsdfR~~~  104 (147)
T d1mb4a1          75 SYTEKVYPALRQAGWKGYWIDAASTLRMDK  104 (147)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEESSSTTTTCT
T ss_pred             hHHHHHhHHHHHcCCceEEEeCCccccccC
Confidence            76666666655555   3666655443333

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.62  E-value=0.5  Score=34.38  Aligned_cols=36  Identities=19%  Similarity=0.015  Sum_probs=31.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +..++++|.| +|.+|+-+++.++.+|.+|.++.+.+
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            5568899999 79999999999999999999998753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.59  E-value=0.54  Score=33.97  Aligned_cols=36  Identities=19%  Similarity=-0.025  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +-.++|+|.| +|.+|+-+++.++.+|.+|.++.+.+
T Consensus        19 ~~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          19 ALPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hCCCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            4457899999 79999999999999999999998764

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=86.48  E-value=0.87  Score=37.65  Aligned_cols=40  Identities=20%  Similarity=0.325  Sum_probs=33.7

Q ss_pred             HHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC
Q 018013          222 LEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG  262 (362)
Q Consensus       222 l~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~  262 (362)
                      +..... -.|++|+|.| .|.+|..+++++...|++|+++..
T Consensus        22 ~~~~~~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          22 AKKLWGGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             HHHHHSCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             HHHcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            444434 5899999999 899999999999999999988764

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=86.45  E-value=0.5  Score=34.30  Aligned_cols=36  Identities=17%  Similarity=0.152  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +..++|+|.| +|.+|.-+++.++.+|.+|.++.+.+
T Consensus        20 ~~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          20 KESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCCCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            4468999999 69999999999999999999999753

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.41  E-value=3.8  Score=34.30  Aligned_cols=97  Identities=20%  Similarity=0.198  Sum_probs=58.3

Q ss_pred             hCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHHH----HcCCc-EEEeCCCccHHHHHHHHCCCce
Q 018013          225 AGPASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLLK----ELGVD-RVINYKAEDIKTVFKEEFPKGF  298 (362)
Q Consensus       225 ~~~~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l~----~~g~~-~v~~~~~~~~~~~~~~~~~~g~  298 (362)
                      +..++|++||=..| ++=|.. .+++... +.+|++.+.++.|...++    .+|+. .++...+......   .....+
T Consensus        98 L~~~~g~~vLD~CA-aPGgKt-~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~---~~~~~f  172 (284)
T d1sqga2          98 LAPQNGEHILDLCA-APGGKT-THILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW---CGEQQF  172 (284)
T ss_dssp             HCCCTTCEEEEESC-TTCHHH-HHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH---HTTCCE
T ss_pred             cCccccceeEeccC-ccccch-hhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchh---cccccc
Confidence            34588998887653 222332 3344433 368999999999887764    57875 3333333222221   234568


Q ss_pred             eEEEE---CCChH--------------------------HHHHHHHHhccCCEEEEE
Q 018013          299 DIIYE---SVGGD--------------------------MFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       299 Dvvid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~  326 (362)
                      |.|+-   |+|..                          .+..+++.+++||++|..
T Consensus       173 d~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs  229 (284)
T d1sqga2         173 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA  229 (284)
T ss_dssp             EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            87654   55521                          345677789999988754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=86.21  E-value=0.5  Score=37.37  Aligned_cols=39  Identities=21%  Similarity=0.107  Sum_probs=33.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHH
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLL  270 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l  270 (362)
                      ++|.|.| +|-+|...+.++...|.+|++.+.+++..+..
T Consensus         5 ~~vaViG-aG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLG-AGIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEEC-CHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            5799999 69999998888888999999999998876654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=86.12  E-value=5.3  Score=30.66  Aligned_cols=90  Identities=12%  Similarity=0.072  Sum_probs=55.9

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHCC--CEEEEe-cCCHhHHHHH-HHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          232 KVLVTAAAGGTGQF-AVQLAKLAG--NTVVAT-CGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       232 ~VlI~ga~g~vG~~-aiqla~~~G--~~Vi~~-~~~~~~~~~l-~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|.|.| +|.+|.- .+...+..+  .+++++ ++++++.+.+ ++++...++    .++.+.+.   ...+|+|+-|+.
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~----~~~~ell~---~~~id~v~I~tp   76 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF----DSYEELLE---SGLVDAVDLTLP   76 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE----SCHHHHHH---SSCCSEEEECCC
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee----eeeecccc---ccccceeecccc
Confidence            688999 7999864 566666543  366654 5666666655 467776655    23444433   346899998888


Q ss_pred             hH-HHHHHHHHhccCCEEEEEcCcc
Q 018013          307 GD-MFNLCLKALAVYGRLIVIGMIS  330 (362)
Q Consensus       307 ~~-~~~~~~~~l~~~G~~v~~G~~~  330 (362)
                      .. ..+.+..++..+ .=|.+..+-
T Consensus        77 ~~~h~~~~~~al~~g-k~V~~EKPl  100 (181)
T d1zh8a1          77 VELNLPFIEKALRKG-VHVICEKPI  100 (181)
T ss_dssp             GGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred             ccccccccccccccc-hhhhcCCCC
Confidence            64 455555555554 445565543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.01  E-value=5.9  Score=30.33  Aligned_cols=88  Identities=13%  Similarity=0.157  Sum_probs=54.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC-CCEEEEe-cCCHhHHHHH-HHcCCc---EEEeCCCccHHHHHHHHCCCceeEEEECC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA-GNTVVAT-CGGEHKAQLL-KELGVD---RVINYKAEDIKTVFKEEFPKGFDIIYESV  305 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~-~~~~~~~~~l-~~~g~~---~v~~~~~~~~~~~~~~~~~~g~Dvvid~~  305 (362)
                      ++.|+| +|.+|...++..+.. +++++++ +.++++.+.+ ++++..   .++    .++.+.+.   ...+|+|+-|+
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~---~~~iD~v~I~t   74 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GSYESLLE---DPEIDALYVPL   74 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHHH---CTTCCEEEECC
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----CcHHHhhh---ccccceeeecc
Confidence            588999 799999888888776 5688765 5566665554 456542   232    23444433   24588888887


Q ss_pred             Ch-HHHHHHHHHhccCCEEEEEcC
Q 018013          306 GG-DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       306 g~-~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      .. ..++.+..++..+ .=|.+..
T Consensus        75 p~~~h~~~~~~~l~~g-~~v~~EK   97 (184)
T d1ydwa1          75 PTSLHVEWAIKAAEKG-KHILLEK   97 (184)
T ss_dssp             CGGGHHHHHHHHHTTT-CEEEECS
T ss_pred             cchhhcchhhhhhhcc-ceeeccc
Confidence            75 4455555555543 3344444

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=86.01  E-value=0.55  Score=34.29  Aligned_cols=36  Identities=19%  Similarity=0.174  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +++++++|.| +|.+|.-++..++..|.+|..+.+++
T Consensus        28 ~~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          28 RPQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hcCCeEEEEC-cchhHHHHHHHhhcccceEEEEeecc
Confidence            5678999999 69999999999999999999998764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=85.93  E-value=0.56  Score=39.60  Aligned_cols=36  Identities=28%  Similarity=0.296  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      ...++|+|+| +|..|+.++..+...|.+|.++..++
T Consensus        28 ~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            6668999999 79999999988888899999998754

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.79  E-value=1.2  Score=38.34  Aligned_cols=98  Identities=11%  Similarity=0.080  Sum_probs=66.3

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEecCCHhHHHHH----HHcCCcEEEeCCCccHHHHHHHHC
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAK-LAGN-TVVATCGGEHKAQLL----KELGVDRVINYKAEDIKTVFKEEF  294 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~-~~G~-~Vi~~~~~~~~~~~l----~~~g~~~v~~~~~~~~~~~~~~~~  294 (362)
                      +.+.+.++..+++.|+| +|..+...++... .... +|.+..+++++.+.+    +..+.....+.     .+.+    
T Consensus       116 a~~~la~~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-----~~a~----  185 (320)
T d1omoa_         116 AAKYLARKNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-----AEEA----  185 (320)
T ss_dssp             HHHHHSCTTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-----HHHH----
T ss_pred             HHHHhccCCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-----hhhh----
Confidence            44555666668899998 8999877776655 4565 899999998887655    33555444322     1221    


Q ss_pred             CCceeEEEECCCh--HHHHHHHHHhccCCEEEEEcCccc
Q 018013          295 PKGFDIIYESVGG--DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       295 ~~g~Dvvid~~g~--~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       .+.|+|+-|+.+  ..+..  +.+++|-.+..+|....
T Consensus       186 -~~aDiV~taT~s~~P~~~~--~~l~~G~hv~~iGs~~p  221 (320)
T d1omoa_         186 -SRCDVLVTTTPSRKPVVKA--EWVEEGTHINAIGADGP  221 (320)
T ss_dssp             -TSSSEEEECCCCSSCCBCG--GGCCTTCEEEECSCCST
T ss_pred             -ccccEEEEeccCcccccch--hhcCCCCeEeecCCccc
Confidence             358999999874  33332  35899999999988553

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=85.26  E-value=2.7  Score=32.45  Aligned_cols=93  Identities=18%  Similarity=0.180  Sum_probs=61.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecC---CHhHHHHHHHc----CC---cE-------EEe--------CCC---
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---GEHKAQLLKEL----GV---DR-------VIN--------YKA---  283 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---~~~~~~~l~~~----g~---~~-------v~~--------~~~---  283 (362)
                      +|.|.| -|-+|.++...+...+.+|+++-.   +.+...++-++    |.   +.       +++        .++   
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            578998 899999999988877888777753   34555555432    21   11       111        111   


Q ss_pred             ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccc
Q 018013          284 EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       284 ~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                      -+|.       ..++|+|+||+|- ...+.+..++..+-+-|.+..++..
T Consensus        81 i~W~-------~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~d  123 (169)
T d1dssg1          81 IPWS-------KAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSAD  123 (169)
T ss_dssp             CCHH-------HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS
T ss_pred             CCcc-------ccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCccc
Confidence            1111       1379999999995 4556777888888777777776653

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.13  E-value=1.7  Score=36.18  Aligned_cols=98  Identities=14%  Similarity=0.133  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHH----C---CCEEEEecCCHhHHHHHHHc--C---C-cEEEeCCCccHHHHHHH--
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKL----A---GNTVVATCGGEHKAQLLKEL--G---V-DRVINYKAEDIKTVFKE--  292 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~----~---G~~Vi~~~~~~~~~~~l~~~--g---~-~~v~~~~~~~~~~~~~~--  292 (362)
                      ++.-+||=.|.  |.|..+..+++.    .   +.++++++.++...+.+++.  .   . ...++.....+.+....  
T Consensus        39 ~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (280)
T d1jqea_          39 KSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML  116 (280)
T ss_dssp             CSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred             CCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence            45557888883  334443333332    2   23688999988887777642  1   1 12233333333322211  


Q ss_pred             --HCCCceeEEEECCC-------hHHHHHHHHHhccCCEEEEEc
Q 018013          293 --EFPKGFDIIYESVG-------GDMFNLCLKALAVYGRLIVIG  327 (362)
Q Consensus       293 --~~~~g~Dvvid~~g-------~~~~~~~~~~l~~~G~~v~~G  327 (362)
                        .....+|+|+-+..       ...++.+.++|+++|.++...
T Consensus       117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~  160 (280)
T d1jqea_         117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV  160 (280)
T ss_dssp             TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEE
Confidence              23467999987644       257889999999999887764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=84.96  E-value=2.4  Score=30.71  Aligned_cols=93  Identities=12%  Similarity=0.119  Sum_probs=62.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCChH--
Q 018013          231 KKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGD--  308 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~--  308 (362)
                      +.++|.| .|.+|+.+++.++  |..|++++.++++.+.++..|...+. .+..+ .+.+++..=..++.++-++..+  
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~-~~~L~~a~i~~A~~vi~~~~~d~~   75 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVH-GDPTR-VSDLEKANVRGARAVIVNLESDSE   75 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEE-SCTTS-HHHHHHTTCTTCSEEEECCSSHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccc-cccCC-HHHHHHhhhhcCcEEEEeccchhh
Confidence            3578888 6899998887764  55788888888988888888875443 33333 3444444445688888888753  


Q ss_pred             --HHHHHHHHhccCCEEEEEcC
Q 018013          309 --MFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       309 --~~~~~~~~l~~~G~~v~~G~  328 (362)
                        ..-...+.+.+..+++..-.
T Consensus        76 n~~~~~~~r~~~~~~~iia~~~   97 (129)
T d2fy8a1          76 TIHCILGIRKIDESVRIIAEAE   97 (129)
T ss_dssp             HHHHHHHHHHHCSSSCEEEECS
T ss_pred             hHHHHHHHHHHCCCceEEEEEc
Confidence              23345566777777666544

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=84.81  E-value=1.5  Score=37.26  Aligned_cols=108  Identities=21%  Similarity=0.212  Sum_probs=67.0

Q ss_pred             HHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec---CCHhHHHHHHHcCCcEEEeCCC-ccHHH------
Q 018013          219 SIALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC---GGEHKAQLLKELGVDRVINYKA-EDIKT------  288 (362)
Q Consensus       219 ~~al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~---~~~~~~~~l~~~g~~~v~~~~~-~~~~~------  288 (362)
                      ++++.++........++.+.+|..|.+++..|+..|.+.+++.   .++.+.+.++.+|++.+..... +....      
T Consensus        57 ~~~~~~~~~~~~~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~a~~~a  136 (318)
T d1v71a1          57 LNALSQLNEAQRKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREKMAKEIS  136 (318)
T ss_dssp             HHHHTTCCHHHHHHCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTTTTCHHHHHHHHH
T ss_pred             HHHHHHhhhccccceeeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEeccCCchHHHHHHHHHH
Confidence            3444433332223346666789999999999999998544443   3567788888999986543222 21111      


Q ss_pred             --------------------------HHHHHCCCceeEEEECCCh----HHHHHHHHHhccCCEEEEEcC
Q 018013          289 --------------------------VFKEEFPKGFDIIYESVGG----DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       289 --------------------------~~~~~~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~~v~~G~  328 (362)
                                                ..++.  +.+|.+|-++|+    ..+...++.+.+..+++-+..
T Consensus       137 ~~~g~~~~~~~~~~~~~~g~~t~~~Ei~~q~--~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~~  204 (318)
T d1v71a1         137 EREGLTIIPPYDHPHVLAGQGTAAKELFEEV--GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEP  204 (318)
T ss_dssp             HHHTCBCCCSSSSHHHHHHHTHHHHHHHHHH--CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HhcCCEecCCccccccccccchHHHHHHHhc--CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeecccc
Confidence                                      11111  247999988874    234456677788888887654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.67  E-value=1.2  Score=38.29  Aligned_cols=88  Identities=22%  Similarity=0.147  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHH----HHcCCc---EEEeCCCccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLL----KELGVD---RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l----~~~g~~---~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      .+|++||-.|. | .|..+..+|+ .|+ +|++++.++ ..+.+    ++.+..   .++..+..++     ......+|
T Consensus        37 ~~~~~VLDlGc-G-tG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l-----~~~~~~~D  107 (328)
T d1g6q1_          37 FKDKIVLDVGC-G-TGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV-----HLPFPKVD  107 (328)
T ss_dssp             HTTCEEEEETC-T-TSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS-----CCSSSCEE
T ss_pred             CCcCEEEEeCC-C-CCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhc-----cCccccee
Confidence            67899999983 3 4555554444 676 899999875 33333    334432   3333332221     01235699


Q ss_pred             EEEECCC-----h-----HHHHHHHHHhccCCEEE
Q 018013          300 IIYESVG-----G-----DMFNLCLKALAVYGRLI  324 (362)
Q Consensus       300 vvid~~g-----~-----~~~~~~~~~l~~~G~~v  324 (362)
                      +|+...-     .     ..+...-+.|+|+|+++
T Consensus       108 ~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         108 IIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            9876422     1     24555568899999885

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=84.58  E-value=1.6  Score=33.22  Aligned_cols=39  Identities=23%  Similarity=0.056  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKA  267 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~  267 (362)
                      ++..+|.|+| +|.+|..++.++...+. +++..+.++++.
T Consensus         5 ~k~~KI~IIG-aG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIG-SGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            5678899999 59999998888777775 899888776554

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=84.50  E-value=0.96  Score=35.82  Aligned_cols=88  Identities=23%  Similarity=0.222  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHHcCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC-
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG-  306 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g-  306 (362)
                      .++.+||=.|.  |.|..+..+     .++++++.+++..+.+++.+...+. .+..++.     .....+|+|+.+.. 
T Consensus        35 ~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~~~~~~~~~-~d~~~l~-----~~~~~fD~I~~~~~l  101 (208)
T d1vlma_          35 LPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIARKRGVFVLK-GTAENLP-----LKDESFDFALMVTTI  101 (208)
T ss_dssp             CCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHHHTTCEEEE-CBTTBCC-----SCTTCEEEEEEESCG
T ss_pred             CCCCeEEEECC--CCccccccc-----ceEEEEeCChhhccccccccccccc-ccccccc-----ccccccccccccccc
Confidence            45668998883  245554444     3578999999999998887664332 2222210     12356999988644 


Q ss_pred             ------hHHHHHHHHHhccCCEEEEEcC
Q 018013          307 ------GDMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       307 ------~~~~~~~~~~l~~~G~~v~~G~  328 (362)
                            ...++.+.+.|+++|+++....
T Consensus       102 ~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_         102 CFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             GGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccchhhhhhcCCCCceEEEEec
Confidence                  1468899999999999887653

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.46  E-value=0.77  Score=33.58  Aligned_cols=36  Identities=8%  Similarity=0.035  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +..++++|.| +|.+|+-++..++.+|.+|+++.+++
T Consensus        20 ~~pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          20 ELPGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            4458999999 69999999999999999999999864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.43  E-value=0.51  Score=34.53  Aligned_cols=37  Identities=22%  Similarity=0.088  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHh
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEH  265 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~  265 (362)
                      +..++++|.| +|-+|+-+++.++.+|.+|.++.+++.
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            6678999999 699999999999999999999987643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.36  E-value=0.41  Score=36.34  Aligned_cols=34  Identities=15%  Similarity=0.197  Sum_probs=30.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG  262 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~  262 (362)
                      =.|++|||.| +|.+|..-+..+...|++|++++.
T Consensus        11 l~gkrvLViG-gG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence            3689999999 599999999999999999998854

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.89  E-value=0.68  Score=34.00  Aligned_cols=36  Identities=14%  Similarity=0.036  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +..++++|.| +|.+|+-+++..+.+|.+|.++.+.+
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            6678999999 69999999999999999999998753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=83.89  E-value=2.8  Score=36.43  Aligned_cols=32  Identities=31%  Similarity=0.344  Sum_probs=26.6

Q ss_pred             CCEEEEEcCCchHHHHHHH-HHHHCCCEEEEec
Q 018013          230 GKKVLVTAAAGGTGQFAVQ-LAKLAGNTVVATC  261 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiq-la~~~G~~Vi~~~  261 (362)
                      +-+|||+||+|-+|..++. |++..|.+|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            4589999999999988775 5567899999875

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.81  E-value=0.69  Score=33.23  Aligned_cols=36  Identities=19%  Similarity=0.099  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +.+++++|.| +|.+|.-+++.++.+|.+|.++.+.+
T Consensus        19 ~~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          19 ALPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            4458999999 69999999999999999999998753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.64  E-value=0.85  Score=33.78  Aligned_cols=36  Identities=17%  Similarity=0.083  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGE  264 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~  264 (362)
                      +++++|+|.| +|.+|.-++..++..|.+|.++.+.+
T Consensus        33 ~~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          33 IADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            5678999999 79999999999999999999998753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=83.25  E-value=0.77  Score=37.21  Aligned_cols=34  Identities=24%  Similarity=0.235  Sum_probs=29.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG  262 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~  262 (362)
                      +.-++|+|+| +|..|++++..+...|.+|.++++
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier   37 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILAR   37 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeC
Confidence            3456899999 799999999999999999999975

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=83.15  E-value=6.1  Score=33.25  Aligned_cols=51  Identities=31%  Similarity=0.439  Sum_probs=37.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC---CHhHHHHHHHcCCcEEE
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG---GEHKAQLLKELGVDRVI  279 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~---~~~~~~~l~~~g~~~v~  279 (362)
                      .++++| |..++|..|++++..|+..|.+.+++..   +..|.+.++.+|+..+.
T Consensus        59 ~~~~~v-v~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          59 TKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             CTTCEE-EESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             CCCcee-eeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            566654 4455899999999999999986444432   46677778888887654

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=82.92  E-value=6.8  Score=31.94  Aligned_cols=92  Identities=22%  Similarity=0.240  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHH----HHcCCc---EEEeCCCccHHHHHHHHCCCcee
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLL----KELGVD---RVINYKAEDIKTVFKEEFPKGFD  299 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l----~~~g~~---~v~~~~~~~~~~~~~~~~~~g~D  299 (362)
                      ...++||=+|  +|.|..+..+++.. +.++++++. ++-.+.+    .+.|..   .+...+..+       ....++|
T Consensus        80 ~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~-------~~p~~~D  149 (256)
T d1qzza2          80 SAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-------PLPVTAD  149 (256)
T ss_dssp             TTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-------CCSCCEE
T ss_pred             ccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeeccc-------cccccch
Confidence            6678898888  57788999999987 569999886 4444433    334432   122211100       1234689


Q ss_pred             EEEECCC-----h----HHHHHHHHHhccCCEEEEEcCc
Q 018013          300 IIYESVG-----G----DMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       300 vvid~~g-----~----~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      +++-..-     .    ..++++.+.|+|+|+++.+...
T Consensus       150 ~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~~  188 (256)
T d1qzza2         150 VVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA  188 (256)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             hhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEec
Confidence            8875432     1    3578899999999999998764

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.75  E-value=8.6  Score=31.92  Aligned_cols=57  Identities=28%  Similarity=0.313  Sum_probs=38.8

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEec---CCHhHHHHHHHcCCcEE
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATC---GGEHKAQLLKELGVDRV  278 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~---~~~~~~~~l~~~g~~~v  278 (362)
                      ++.+...+++.+ ++.+++|..|.+++..|+.+|.+++++.   .++.+...++.+|++.+
T Consensus        52 a~~~g~~~~~~~-vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~  111 (302)
T d1fcja_          52 AEKRGVLKPGVE-LVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV  111 (302)
T ss_dssp             HHHHTCCCTTCE-EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HHHcCCCCCCce-EEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence            444333356655 5556689999999999999998544443   35667777788888644

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=82.16  E-value=9.9  Score=29.87  Aligned_cols=92  Identities=14%  Similarity=0.118  Sum_probs=60.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEecCCHhHHHHH----HHcCCcEE--EeCCCccHHHHHHHHCCCceeEEE
Q 018013          230 GKKVLVTAAAGGTGQFAVQLAKLA-GNTVVATCGGEHKAQLL----KELGVDRV--INYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       230 g~~VlI~ga~g~vG~~aiqla~~~-G~~Vi~~~~~~~~~~~l----~~~g~~~v--~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      +..||=+|  -|.|..++.+|+.. ..++++++.+......+    ++.+.+.+  +..+...+   ........+|.|+
T Consensus        30 ~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l---~~~~~~~~~d~v~  104 (204)
T d2fcaa1          30 NPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL---TDVFEPGEVKRVY  104 (204)
T ss_dssp             CCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH---HHHCCTTSCCEEE
T ss_pred             CceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhh---hcccCchhhhccc
Confidence            34556666  46688889999876 46999999988877665    34676533  33222332   2223345577766


Q ss_pred             ECCC---------------hHHHHHHHHHhccCCEEEEE
Q 018013          303 ESVG---------------GDMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       303 d~~g---------------~~~~~~~~~~l~~~G~~v~~  326 (362)
                      -...               .+.++.+.+.|++||.|...
T Consensus       105 i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         105 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            4432               24788899999999999875

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.03  E-value=2.2  Score=33.23  Aligned_cols=90  Identities=17%  Similarity=0.138  Sum_probs=52.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEecCCHhHHHHHHH----cCCcEEEeCCCccHHHHHHHHCCCceeEEEECCC
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLLKE----LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVG  306 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~~~~~~~l~~----~g~~~v~~~~~~~~~~~~~~~~~~g~Dvvid~~g  306 (362)
                      +|.|.||+|-+|+-+++++..+- .++..+.++...-+.+.+    +-.+..+.  ..+..+..     .++|++|-|++
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~--~~~~~~~~-----~~~dvvf~a~p   75 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILS--EFDPEKVS-----KNCDVLFTALP   75 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCB--CCCHHHHH-----HHCSEEEECCS
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccccc--ccCHhHhc-----cccceEEEccc
Confidence            68999999999999999988665 466666544322222221    11111111  12222221     24899999999


Q ss_pred             hHHHHHHHHHhccCCEEEEEcCc
Q 018013          307 GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       307 ~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      .......... ..+-++|+.+.-
T Consensus        76 ~~~s~~~~~~-~~~~~VIDlSad   97 (176)
T d1vkna1          76 AGASYDLVRE-LKGVKIIDLGAD   97 (176)
T ss_dssp             TTHHHHHHTT-CCSCEEEESSST
T ss_pred             cHHHHHHHHh-hccceEEecCcc
Confidence            7655544443 345677776553

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.64  E-value=2.6  Score=30.65  Aligned_cols=62  Identities=23%  Similarity=0.282  Sum_probs=46.5

Q ss_pred             HHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHHcCCcEEEeCC
Q 018013          221 ALEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKELGVDRVINYK  282 (362)
Q Consensus       221 al~~~~~~~g~~VlI~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~~g~~~v~~~~  282 (362)
                      .|.....+.-+.+++.-..-..-+.++++++.+|. ++++.+.+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            45555555555555544355567888899999997 788888888889999999999998754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.32  E-value=1.7  Score=36.16  Aligned_cols=43  Identities=19%  Similarity=0.209  Sum_probs=35.6

Q ss_pred             HHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecC
Q 018013          219 SIALEQAGP-ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCG  262 (362)
Q Consensus       219 ~~al~~~~~-~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~  262 (362)
                      -.++..... -.|++|+|.| .|-+|..+++.+...|++|+++..
T Consensus        24 ~~~~~~~~~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          24 EAVMKHENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             HHHHHHTTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             HHHHHhCCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            344555555 6789999999 899999999999999999988754

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.22  E-value=7.1  Score=29.89  Aligned_cols=93  Identities=17%  Similarity=0.119  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHC---CCEEEEecC--CHhHHHHHHHc----CC---cE---------------EEeCCC-
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLA---GNTVVATCG--GEHKAQLLKEL----GV---DR---------------VINYKA-  283 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~---G~~Vi~~~~--~~~~~~~l~~~----g~---~~---------------v~~~~~-  283 (362)
                      +|.|.| -|-+|..+.+.+...   ..+|+++-.  +.+...++-++    |.   +.               ++..++ 
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688998 899999999877532   367777643  34555555332    22   11               111111 


Q ss_pred             --ccHHHHHHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCcccc
Q 018013          284 --EDIKTVFKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQY  332 (362)
Q Consensus       284 --~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~  332 (362)
                        -+|.+       .|+|+|+||+|- ...+.+..++..|-+-|.+..++..
T Consensus        81 ~~i~W~~-------~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~kd  125 (169)
T d1hdgo1          81 SKLPWKD-------LGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKG  125 (169)
T ss_dssp             GGSCHHH-------HTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS
T ss_pred             hhCCccc-------cCCCEEEEecceeccccchhhhccCCCceEEEecccCC
Confidence              11211       279999999995 5566777788777656666666543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.03  E-value=0.35  Score=39.91  Aligned_cols=43  Identities=12%  Similarity=0.103  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE  272 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~  272 (362)
                      .+|++||=.| +| .|.....+++..+.+|++++-++...+.+++
T Consensus        50 ~~g~~vLDlG-cG-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          50 LQGDTLIDIG-SG-PTIYQVLAACDSFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             CCEEEEEESS-CT-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred             CCCCEEEEEC-CC-CCHhHHHHhccccCcEEEecCCHHHHHHHHH
Confidence            7788888888 43 3544444555444489999999988888754

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=81.02  E-value=4.9  Score=30.80  Aligned_cols=97  Identities=15%  Similarity=0.139  Sum_probs=57.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecC--CHhHHHHHHH----cCC---cE-------EEeC------CCccHHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCG--GEHKAQLLKE----LGV---DR-------VINY------KAEDIKTV  289 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~--~~~~~~~l~~----~g~---~~-------v~~~------~~~~~~~~  289 (362)
                      +|.|.| -|-+|..+.+++...+.+|+++-.  +.+...++-+    .|.   ..       +++.      ...+..+.
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            588998 899999999988888888877754  2334444433    221   10       1110      01111000


Q ss_pred             HHHHCCCceeEEEECCCh-HHHHHHHHHhccCCEEEEEcCccc
Q 018013          290 FKEEFPKGFDIIYESVGG-DMFNLCLKALAVYGRLIVIGMISQ  331 (362)
Q Consensus       290 ~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~  331 (362)
                       . ....|+|+|+||+|. ...+.+..++..+-+=|.+..++.
T Consensus        81 -~-W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k  121 (168)
T d2g82a1          81 -P-WAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAK  121 (168)
T ss_dssp             -C-TGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             -c-ccccCCceeEeccccccchHHhhhhhccccceeeeccccc
Confidence             0 012479999999995 445666777777765566666553

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.80  E-value=0.95  Score=37.95  Aligned_cols=35  Identities=20%  Similarity=0.179  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEecCC
Q 018013          228 ASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGG  263 (362)
Q Consensus       228 ~~g~~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~  263 (362)
                      ++..+|+|+| +|-.|+.++..+...|.+|.+...+
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            4566799999 7999999999999999999998764

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=80.60  E-value=1.6  Score=35.25  Aligned_cols=91  Identities=14%  Similarity=0.193  Sum_probs=50.6

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHH-CCCEEEEe-cCCHhHHHHH-HHcCCc--EEEeCCCccHHHHHHHHCCCceeEEEEC
Q 018013          231 KKVLVTAAAGGTGQF-AVQLAKL-AGNTVVAT-CGGEHKAQLL-KELGVD--RVINYKAEDIKTVFKEEFPKGFDIIYES  304 (362)
Q Consensus       231 ~~VlI~ga~g~vG~~-aiqla~~-~G~~Vi~~-~~~~~~~~~l-~~~g~~--~v~~~~~~~~~~~~~~~~~~g~Dvvid~  304 (362)
                      =+|.|+| +|.+|.- .+...+. -+++++++ ++++++.+.+ +++|.+  .+..+.+  +.+.   .....+|+|+-|
T Consensus        34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--~~el---l~~~~iD~V~I~  107 (221)
T d1h6da1          34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--FDKI---AKDPKIDAVYII  107 (221)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--GGGG---GGCTTCCEEEEC
T ss_pred             EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc--hhhh---cccccceeeeec
Confidence            4789999 7988863 4444443 36787755 5566665555 567663  2222322  2222   223468888888


Q ss_pred             CCh-HHHHHHHHHhccCCEEEEEcC
Q 018013          305 VGG-DMFNLCLKALAVYGRLIVIGM  328 (362)
Q Consensus       305 ~g~-~~~~~~~~~l~~~G~~v~~G~  328 (362)
                      +.. ...+.+..+|..+ .=|.+..
T Consensus       108 tp~~~H~~~~~~al~~g-k~v~~EK  131 (221)
T d1h6da1         108 LPNSLHAEFAIRAFKAG-KHVMCEK  131 (221)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEECS
T ss_pred             cchhhhhhHHHHhhhcc-hhhhcCC
Confidence            775 3445555555443 3344444

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.55  E-value=1.4  Score=35.00  Aligned_cols=40  Identities=15%  Similarity=0.246  Sum_probs=35.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEecCCHhHHHHHHH
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE  272 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G~~Vi~~~~~~~~~~~l~~  272 (362)
                      +|.|+| .|-+|+.++..+...|.+|++.+.++++.+.+.+
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            588998 8999999888888899999999999999888865

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.21  E-value=2  Score=33.31  Aligned_cols=90  Identities=14%  Similarity=0.140  Sum_probs=51.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHCC-CEEEEecCC-----H-hHHHHHH-H-cCC-c-EEEeCCCccHHHHHHHHCCCceeE
Q 018013          232 KVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGG-----E-HKAQLLK-E-LGV-D-RVINYKAEDIKTVFKEEFPKGFDI  300 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla~~~G-~~Vi~~~~~-----~-~~~~~l~-~-~g~-~-~v~~~~~~~~~~~~~~~~~~g~Dv  300 (362)
                      +|.|.||+|-+|+-+++++..+- .++..+...     . ++..... . .+. + .+....+..       ....++|+
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~dv   75 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVR-------DFSADVDV   75 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGG-------GTCTTCCE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhh-------hhhcccce
Confidence            68999999999999999999874 466544321     1 1222221 1 111 1 111111110       12356899


Q ss_pred             EEECCChHHHHHHHH-HhccCCEEEEEcC
Q 018013          301 IYESVGGDMFNLCLK-ALAVYGRLIVIGM  328 (362)
Q Consensus       301 vid~~g~~~~~~~~~-~l~~~G~~v~~G~  328 (362)
                      +|-|++......... .+..+-+++..+.
T Consensus        76 vf~alp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          76 VFLATAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             EEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             eeccccchhHHHHhhhhhhcCceeecccc
Confidence            999999765554444 4555557776654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=80.17  E-value=4.6  Score=34.41  Aligned_cols=95  Identities=21%  Similarity=0.212  Sum_probs=59.3

Q ss_pred             CCCCEEEEEc-CCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH----cCCc----EEEeCCCccHHHHHHH--HCC
Q 018013          228 ASGKKVLVTA-AAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE----LGVD----RVINYKAEDIKTVFKE--EFP  295 (362)
Q Consensus       228 ~~g~~VlI~g-a~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~----~v~~~~~~~~~~~~~~--~~~  295 (362)
                      .+|++||=.. ++|+.+   +.++ ..|+ +|+.++.++...+.+++    .|.+    .++.   .+..+.++.  ..+
T Consensus       143 ~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~---~d~~~~l~~~~~~~  215 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV---MDVFDYFKYARRHH  215 (317)
T ss_dssp             TBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE---SCHHHHHHHHHHTT
T ss_pred             hCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE---ccHHHHHHHHHhhc
Confidence            6788988665 344444   3333 3677 79999999888877753    2332    2232   233333332  235


Q ss_pred             CceeEEEEC---CC-------------hHHHHHHHHHhccCCEEEEEcCc
Q 018013          296 KGFDIIYES---VG-------------GDMFNLCLKALAVYGRLIVIGMI  329 (362)
Q Consensus       296 ~g~Dvvid~---~g-------------~~~~~~~~~~l~~~G~~v~~G~~  329 (362)
                      ..+|+||--   .+             .+.+..++++|++||.++.+...
T Consensus       216 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         216 LTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             CCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            679998852   11             13677889999999999987654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.07  E-value=9.4  Score=28.24  Aligned_cols=92  Identities=17%  Similarity=0.132  Sum_probs=52.4

Q ss_pred             EEEEEcCCchHHHHHHHHH-HHCC--CEEEEecCCHhHHHHHHH---cCCc---EEEeCCCccHHHHHHHHCCCceeEEE
Q 018013          232 KVLVTAAAGGTGQFAVQLA-KLAG--NTVVATCGGEHKAQLLKE---LGVD---RVINYKAEDIKTVFKEEFPKGFDIIY  302 (362)
Q Consensus       232 ~VlI~ga~g~vG~~aiqla-~~~G--~~Vi~~~~~~~~~~~l~~---~g~~---~v~~~~~~~~~~~~~~~~~~g~Dvvi  302 (362)
                      +|.|+|++|.+|..++.++ ...+  .++...+..+.....+.+   ....   ..+ ....++.+.      .+.|+|+
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~~~------~~aDvvv   74 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDATPAL------EGADVVL   74 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCCHHHH------TTCSEEE
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCCcccc------CCCCEEE
Confidence            6889998899998887754 3444  478888765433222222   1111   222 222333322      4689999


Q ss_pred             ECCCh---------H-------HHHHH---HHHhccCCEEEEEcCcc
Q 018013          303 ESVGG---------D-------MFNLC---LKALAVYGRLIVIGMIS  330 (362)
Q Consensus       303 d~~g~---------~-------~~~~~---~~~l~~~G~~v~~G~~~  330 (362)
                      -+.|.         +       .+...   +..-+|.+.++.+..+-
T Consensus        75 itaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNPv  121 (145)
T d2cmda1          75 ISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV  121 (145)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred             ECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCCc
Confidence            99882         1       12222   23345778888775543

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.04  E-value=2.8  Score=36.80  Aligned_cols=91  Identities=20%  Similarity=0.213  Sum_probs=61.1

Q ss_pred             EEcCCchHHHHHHHHHHHCCC-EEEEecCCHhHHHHHHH----cCCcE--------EE------eCCCccHHHHHHHHCC
Q 018013          235 VTAAAGGTGQFAVQLAKLAGN-TVVATCGGEHKAQLLKE----LGVDR--------VI------NYKAEDIKTVFKEEFP  295 (362)
Q Consensus       235 I~ga~g~vG~~aiqla~~~G~-~Vi~~~~~~~~~~~l~~----~g~~~--------v~------~~~~~~~~~~~~~~~~  295 (362)
                      |.-+-++.|...+.+|+..|+ +|++.+.+++-.+.+++    .+...        ..      .....+....+ ...+
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~-~~~~  127 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM-AERH  127 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH-HHST
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhh-Hhhc
Confidence            334467788999999998888 89999999988887753    22221        11      11112322222 2345


Q ss_pred             CceeEE-EECCCh--HHHHHHHHHhccCCEEEEE
Q 018013          296 KGFDII-YESVGG--DMFNLCLKALAVYGRLIVI  326 (362)
Q Consensus       296 ~g~Dvv-id~~g~--~~~~~~~~~l~~~G~~v~~  326 (362)
                      +.+|+| +|..|.  ..++.++++++.+|-+...
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vT  161 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVT  161 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEE
Confidence            679955 788775  7899999999999876654