Query 018015
Match_columns 362
No_of_seqs 193 out of 405
Neff 3.0
Searched_HMMs 46136
Date Fri Mar 29 05:24:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018015.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018015hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03162 golden-2 like transcr 99.9 1.7E-23 3.8E-28 206.7 6.8 61 30-91 231-291 (526)
2 PF14379 Myb_CC_LHEQLE: MYB-CC 99.8 1.2E-21 2.6E-26 146.6 6.3 49 118-166 3-51 (51)
3 TIGR01557 myb_SHAQKYF myb-like 99.8 2.3E-21 5E-26 146.4 6.5 56 34-89 1-56 (57)
4 PF00249 Myb_DNA-binding: Myb- 97.2 0.001 2.2E-08 47.5 5.6 48 36-87 1-48 (48)
5 smart00426 TEA TEA domain. 90.4 0.3 6.6E-06 39.3 3.2 46 38-85 5-67 (68)
6 PF14379 Myb_CC_LHEQLE: MYB-CC 84.2 2.1 4.6E-05 32.8 4.5 32 131-163 6-37 (51)
7 PF15235 GRIN_C: G protein-reg 71.1 3.1 6.7E-05 37.6 2.3 20 137-156 70-89 (137)
8 PF12776 Myb_DNA-bind_3: Myb/S 58.4 13 0.00028 29.0 3.4 52 38-89 1-64 (96)
9 TIGR02894 DNA_bind_RsfA transc 51.6 92 0.002 29.0 8.1 52 31-88 43-94 (161)
10 KOG3841 TEF-1 and related tran 47.3 21 0.00046 37.4 3.7 21 35-55 75-95 (455)
11 smart00501 BRIGHT BRIGHT, ARID 46.9 19 0.00041 28.8 2.7 46 41-87 32-84 (93)
12 smart00717 SANT SANT SWI3, AD 38.3 1.1E+02 0.0025 19.9 5.5 44 37-85 2-45 (49)
13 cd00167 SANT 'SWI3, ADA2, N-Co 36.3 1.2E+02 0.0026 19.6 5.3 43 38-85 1-43 (45)
14 PF07384 DUF1497: Protein of u 33.9 36 0.00078 26.7 2.3 22 37-58 36-57 (59)
15 PF01285 TEA: TEA/ATTS domain 26.7 36 0.00078 35.5 1.6 24 32-55 45-68 (431)
16 PF01519 DUF16: Protein of unk 25.7 2E+02 0.0043 25.1 5.6 24 139-162 68-91 (102)
17 TIGR02399 salt_tol_Pase glucos 24.4 1.4E+02 0.003 31.3 5.1 29 131-162 162-190 (389)
18 PF09506 Salt_tol_Pase: Glucos 20.2 1.7E+02 0.0038 30.5 4.9 30 131-163 156-185 (381)
No 1
>PLN03162 golden-2 like transcription factor; Provisional
Probab=99.88 E-value=1.7e-23 Score=206.74 Aligned_cols=61 Identities=48% Similarity=0.759 Sum_probs=57.9
Q ss_pred cCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHHhhCCCCccHHHHHHhhhhhhcCCC
Q 018015 30 TTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQ 91 (362)
Q Consensus 30 s~~~KpRLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYRl~~~ 91 (362)
...+|+||+||+|||++||+||++|| .++||||.||++|+|+|||++||||||||||+.++
T Consensus 231 ~g~KKpRLrWTpELH~rFVeAV~qLG-~dKATPK~ILelMnV~GLTRenVKSHLQKYRl~rk 291 (526)
T PLN03162 231 PGKKKAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRR 291 (526)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHhC-cCccchHHHHHHcCCCCcCHHHHHHHHHHHHHhcc
Confidence 34679999999999999999999999 79999999999999999999999999999999875
No 2
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=99.85 E-value=1.2e-21 Score=146.59 Aligned_cols=49 Identities=76% Similarity=0.930 Sum_probs=45.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhHHHHHHHHHHHHhc
Q 018015 118 IGRSMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLA 166 (362)
Q Consensus 118 ~~~~~~~mQmEVQrrLHEQLEVQR~LQLRIEAQGKYLQsiLEkAqe~La 166 (362)
...+++++||||||||||||||||+||+|||||||||++|||+|+++++
T Consensus 3 ~i~EALr~QmEvQrrLhEQLEvQr~Lqlrieaqgkyl~~ilek~~~~~s 51 (51)
T PF14379_consen 3 QITEALRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQKALS 51 (51)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 3456788999999999999999999999999999999999999998864
No 3
>TIGR01557 myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
Probab=99.84 E-value=2.3e-21 Score=146.42 Aligned_cols=56 Identities=59% Similarity=0.976 Sum_probs=54.2
Q ss_pred CCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHHhhCCCCccHHHHHHhhhhhhcC
Q 018015 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLG 89 (362)
Q Consensus 34 KpRLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYRl~ 89 (362)
|+|++||+|+|++||+||+.||+.+.||||.|+++|++++||..||+|||||||+.
T Consensus 1 k~r~~WT~eeh~~Fl~ai~~~G~g~~a~pk~I~~~~~~~~lT~~qV~SH~QKy~~k 56 (57)
T TIGR01557 1 KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLK 56 (57)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcccchHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence 78999999999999999999998789999999999999999999999999999975
No 4
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=97.20 E-value=0.001 Score=47.46 Aligned_cols=48 Identities=33% Similarity=0.434 Sum_probs=41.0
Q ss_pred CcccCHHHHHHHHHHHHHhCCCCCCChhHHHHhhCCCCccHHHHHHhhhhhh
Q 018015 36 RLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFR 87 (362)
Q Consensus 36 RLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYR 87 (362)
|-.||+|=++.|++||.++|. + .-+.|-+.|+ .+-|..++++|.++|+
T Consensus 1 r~~Wt~eE~~~l~~~v~~~g~-~--~W~~Ia~~~~-~~Rt~~qc~~~~~~~~ 48 (48)
T PF00249_consen 1 RGPWTEEEDEKLLEAVKKYGK-D--NWKKIAKRMP-GGRTAKQCRSRYQNLL 48 (48)
T ss_dssp S-SS-HHHHHHHHHHHHHSTT-T--HHHHHHHHHS-SSSTHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCC-c--HHHHHHHHcC-CCCCHHHHHHHHHhhC
Confidence 568999999999999999992 1 4789999998 7899999999999985
No 5
>smart00426 TEA TEA domain.
Probab=90.39 E-value=0.3 Score=39.33 Aligned_cols=46 Identities=22% Similarity=0.377 Sum_probs=29.6
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCChh-HHHH---hhC-----------CCCc--cHHHHHHhhhh
Q 018015 38 RWTVELHERFVDAVTQLGGPDKATPK-TIMR---VMG-----------VKGL--TLYHLKSHLQK 85 (362)
Q Consensus 38 rWT~ELH~rFV~AV~qLGG~dkAtPK-~IL~---lM~-----------V~GL--T~~hVKSHLQK 85 (362)
.|.++|...|++|+...= ...+=| .+.. +.| ..|. |..+|.||+|.
T Consensus 5 vWp~~lE~Af~~aL~~~~--~~g~~kik~~~r~k~~gRNelIs~YI~~~tGk~Rt~KQVsShIQv 67 (68)
T smart00426 5 VWSPDIEQAFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQV 67 (68)
T ss_pred cCcHHHHHHHHHHHHHcC--ccCcccchhhhcCcccchhHHHHHHHHHHhCCccchhhhcchhee
Confidence 699999999999998775 222222 1211 011 1343 78889999984
No 6
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=84.20 E-value=2.1 Score=32.84 Aligned_cols=32 Identities=34% Similarity=0.438 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhHHHHHHHHHHH
Q 018015 131 RRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQ 163 (362)
Q Consensus 131 rrLHEQLEVQR~LQLRIEAQGKYLQsiLEkAqe 163 (362)
.-|..|+||||+|.=.+|.|.+ ||.=+|...+
T Consensus 6 EALr~QmEvQrrLhEQLEvQr~-Lqlrieaqgk 37 (51)
T PF14379_consen 6 EALRMQMEVQRRLHEQLEVQRH-LQLRIEAQGK 37 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhH
Confidence 4467888888888888888854 4444454433
No 7
>PF15235 GRIN_C: G protein-regulated inducer of neurite outgrowth C-terminus
Probab=71.13 E-value=3.1 Score=37.57 Aligned_cols=20 Identities=25% Similarity=0.498 Sum_probs=16.6
Q ss_pred HHHHHHHHHhHHHHhhHHHH
Q 018015 137 LEVQRHLQLRIEAQGKYMQS 156 (362)
Q Consensus 137 LEVQR~LQLRIEAQGKYLQs 156 (362)
+-||+||+++||+|++....
T Consensus 70 ~AIQkHLE~qi~e~~~q~~~ 89 (137)
T PF15235_consen 70 MAIQKHLERQIEEHERQRAP 89 (137)
T ss_pred HHHHHHHHHHHHHhhhcccc
Confidence 45899999999999987644
No 8
>PF12776 Myb_DNA-bind_3: Myb/SANT-like DNA-binding domain; InterPro: IPR024752 This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains.
Probab=58.37 E-value=13 Score=29.05 Aligned_cols=52 Identities=19% Similarity=0.289 Sum_probs=35.1
Q ss_pred ccCHHHHHHHHHHHHHh---CCC-CCCChh-----HHHHhhCC---CCccHHHHHHhhhhhhcC
Q 018015 38 RWTVELHERFVDAVTQL---GGP-DKATPK-----TIMRVMGV---KGLTLYHLKSHLQKFRLG 89 (362)
Q Consensus 38 rWT~ELH~rFV~AV~qL---GG~-dkAtPK-----~IL~lM~V---~GLT~~hVKSHLQKYRl~ 89 (362)
+||++..+-||+.+-+. |.. .....| .|.+.++- ..+|..||++|+...|..
T Consensus 1 ~Wt~~~~~~ll~~~~e~~~~g~~~~~~~fk~~~w~~i~~~~~~~~~~~~t~~qlknk~~~lk~~ 64 (96)
T PF12776_consen 1 SWTPEMTRFLLDLLIEQINKGNRPTNGGFKKEGWNNIAEEFNEKTGLNYTKKQLKNKWKTLKKD 64 (96)
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCCCCcCHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHH
Confidence 69999999999988443 433 233333 36665553 456889999998866543
No 9
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.
Probab=51.58 E-value=92 Score=28.99 Aligned_cols=52 Identities=21% Similarity=0.329 Sum_probs=37.9
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHhCCCCCCChhHHHHhhCCCCccHHHHHHhhhhhhc
Q 018015 31 TDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 (362)
Q Consensus 31 ~~~KpRLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQKYRl 88 (362)
|....+|||+..+-..+.+||...- ..+-.++.. ...||+..|-+-||.|..
T Consensus 43 TsAACGFRWNs~VRkqY~~~i~~AK-kqRk~~~~~-----~~~ltl~~vI~fLq~l~~ 94 (161)
T TIGR02894 43 TAAACGFRWNAYVRKQYEEAIELAK-KQRKELKRE-----AGSLTLQDVISFLQNLKT 94 (161)
T ss_pred cHHHhcchHHHHHHHHHHHHHHHHH-HHHhccccC-----cccCCHHHHHHHHHHHHh
Confidence 4456899999999999999997643 111112211 256999999999999874
No 10
>KOG3841 consensus TEF-1 and related transcription factor, TEAD family [Transcription]
Probab=47.30 E-value=21 Score=37.41 Aligned_cols=21 Identities=14% Similarity=0.400 Sum_probs=17.5
Q ss_pred CCcccCHHHHHHHHHHHHHhC
Q 018015 35 PRLRWTVELHERFVDAVTQLG 55 (362)
Q Consensus 35 pRLrWT~ELH~rFV~AV~qLG 55 (362)
.-=+|+++..+.|.+|+...-
T Consensus 75 aegvWSpdIEqsFqEALaiyp 95 (455)
T KOG3841|consen 75 AEGVWSPDIEQSFQEALAIYP 95 (455)
T ss_pred cccccChhHHHHHHHHHhhcC
Confidence 345899999999999997663
No 11
>smart00501 BRIGHT BRIGHT, ARID (A/T-rich interaction domain) domain. DNA-binding domain containing a helix-turn-helix structure
Probab=46.92 E-value=19 Score=28.84 Aligned_cols=46 Identities=26% Similarity=0.471 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCh----hHHHHhhCCCCc---cHHHHHHhhhhhh
Q 018015 41 VELHERFVDAVTQLGGPDKATP----KTIMRVMGVKGL---TLYHLKSHLQKFR 87 (362)
Q Consensus 41 ~ELH~rFV~AV~qLGG~dkAtP----K~IL~lM~V~GL---T~~hVKSHLQKYR 87 (362)
-+|++-|+ +|..+||.++.+= +.|.+.||++.- ...++|+|-.||=
T Consensus 32 vdL~~Ly~-~V~~~GG~~~v~~~~~W~~Va~~lg~~~~~~~~~~~lk~~Y~k~L 84 (93)
T smart00501 32 LDLYRLYR-LVQERGGYDQVTKDKKWKEIARELGIPDTSTSAASSLRKHYERYL 84 (93)
T ss_pred CcHHHHHH-HHHHccCHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHHHHHHh
Confidence 47999998 5889999876442 368889998742 3567888888773
No 12
>smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=38.26 E-value=1.1e+02 Score=19.88 Aligned_cols=44 Identities=20% Similarity=0.303 Sum_probs=32.0
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCChhHHHHhhCCCCccHHHHHHhhhh
Q 018015 37 LRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQK 85 (362)
Q Consensus 37 LrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQK 85 (362)
-.||++=...|+.+|.++| . ..=+.|-+.|+ +=|...|+.+-..
T Consensus 2 ~~Wt~~E~~~l~~~~~~~g-~--~~w~~Ia~~~~--~rt~~~~~~~~~~ 45 (49)
T smart00717 2 GEWTEEEDELLIELVKKYG-K--NNWEKIAKELP--GRTAEQCRERWNN 45 (49)
T ss_pred CCCCHHHHHHHHHHHHHHC-c--CCHHHHHHHcC--CCCHHHHHHHHHH
Confidence 4699999999999999999 1 22355666664 5677777766443
No 13
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=36.28 E-value=1.2e+02 Score=19.55 Aligned_cols=43 Identities=23% Similarity=0.350 Sum_probs=32.3
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCChhHHHHhhCCCCccHHHHHHhhhh
Q 018015 38 RWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQK 85 (362)
Q Consensus 38 rWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~GLT~~hVKSHLQK 85 (362)
.||.|=+..|+.++..+|- ..=+.|-+.|+ +=|..+|+.|..+
T Consensus 1 ~Wt~eE~~~l~~~~~~~g~---~~w~~Ia~~~~--~rs~~~~~~~~~~ 43 (45)
T cd00167 1 PWTEEEDELLLEAVKKYGK---NNWEKIAKELP--GRTPKQCRERWRN 43 (45)
T ss_pred CCCHHHHHHHHHHHHHHCc---CCHHHHHhHcC--CCCHHHHHHHHHH
Confidence 4999999999999999992 23456777664 3577788777554
No 14
>PF07384 DUF1497: Protein of unknown function (DUF1497); InterPro: IPR009972 This entry is represented by Bacteriophage r1t, Orf17. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins of around 59 residues in length. Members of this family seem to be found exclusively in Lactococcus lactis and the bacteriophages that infect this organism. The function of this family is unknown.
Probab=33.90 E-value=36 Score=26.73 Aligned_cols=22 Identities=23% Similarity=0.620 Sum_probs=19.3
Q ss_pred cccCHHHHHHHHHHHHHhCCCC
Q 018015 37 LRWTVELHERFVDAVTQLGGPD 58 (362)
Q Consensus 37 LrWT~ELH~rFV~AV~qLGG~d 58 (362)
-+++.|+|..|-+-|..|||.+
T Consensus 36 ~kfnqem~aefheri~klggk~ 57 (59)
T PF07384_consen 36 NKFNQEMQAEFHERIKKLGGKN 57 (59)
T ss_pred hHhhHHHHHHHHHHHHHhcccc
Confidence 3578999999999999999854
No 15
>PF01285 TEA: TEA/ATTS domain family; InterPro: IPR000818 Transcriptional enhancer activators are nuclear proteins that contain a TEA/ATTSdomain, a DNA-binding region of 66-68 amino acids. The TEA/ATTS domain is found in the N-termini of certain gene regulatory proteins, such as the Simian virus 40 (SV40) enhancer factor TEF-1, yeast trans-acting factor TEC-1 (which is required for TY1 enhancer activity), and the Aspergillus abaA regulatory gene product. SV40 and retroviral enhancers, and those to which TEF-1, TEC-1 and abaA proteins bind, contain GT-IIC sites: the TEA/ATTS domain may therefore recognise and bind such sites. Secondary structure predictions suggest the presence of 3 helices, but have not confirmed the presence of the helix-turn-helix motif characteristic of many DNA-binding proteins: DNA-binding may therefore be effected by a different mechanism [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3L15_B 2HZD_A 3KYS_A 3JUA_C 4EAZ_B.
Probab=26.68 E-value=36 Score=35.46 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=16.9
Q ss_pred CCCCCcccCHHHHHHHHHHHHHhC
Q 018015 32 DPKPRLRWTVELHERFVDAVTQLG 55 (362)
Q Consensus 32 ~~KpRLrWT~ELH~rFV~AV~qLG 55 (362)
+.+..-+|++++...|++|+...=
T Consensus 45 ~~~~~~vw~~~~e~af~~al~~~~ 68 (431)
T PF01285_consen 45 DGDGEGVWPPDIEQAFQEALAIYP 68 (431)
T ss_dssp -GGGS--S-HHHHHHHHHHHHHS-
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCC
Confidence 456788999999999999997763
No 16
>PF01519 DUF16: Protein of unknown function DUF16; InterPro: IPR002862 Proteins that contain this domain are of unknown function. It appears to be confined to proteins from Mycoplasma pneumoniae [].; PDB: 2BA2_C.
Probab=25.68 E-value=2e+02 Score=25.14 Aligned_cols=24 Identities=38% Similarity=0.418 Sum_probs=19.7
Q ss_pred HHHHHHHhHHHHhhHHHHHHHHHH
Q 018015 139 VQRHLQLRIEAQGKYMQSILEKAC 162 (362)
Q Consensus 139 VQR~LQLRIEAQGKYLQsiLEkAq 162 (362)
.=+.||.+|.+||+-|++|++.-+
T Consensus 68 qIkel~~e~k~qgktL~~I~~~L~ 91 (102)
T PF01519_consen 68 QIKELQVEQKAQGKTLQLILKTLQ 91 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 336799999999999999987543
No 17
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=24.35 E-value=1.4e+02 Score=31.31 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhHHHHHHHHHH
Q 018015 131 RRLHEQLEVQRHLQLRIEAQGKYMQSILEKAC 162 (362)
Q Consensus 131 rrLHEQLEVQR~LQLRIEAQGKYLQsiLEkAq 162 (362)
..+++..|+|+.||..++ +-|..+|++|.
T Consensus 162 ~~v~~d~~~~~~LQ~~~~---~lM~~Ll~~A~ 190 (389)
T TIGR02399 162 DLVKDDSEIRKILQKSFE---DLMNELMYKAK 190 (389)
T ss_pred HHccchHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 446777778888888887 57889999986
No 18
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=20.19 E-value=1.7e+02 Score=30.49 Aligned_cols=30 Identities=30% Similarity=0.417 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhHHHHHHHHHHH
Q 018015 131 RRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQ 163 (362)
Q Consensus 131 rrLHEQLEVQR~LQLRIEAQGKYLQsiLEkAqe 163 (362)
..+++..+.|+.||..++ +-|+.+|++|..
T Consensus 156 ~~~~~d~~~~~~LQ~~~~---~lM~~Ll~~A~~ 185 (381)
T PF09506_consen 156 DLVPDDVERQQQLQQMMQ---ELMNELLEKAEA 185 (381)
T ss_pred HHhcccHHHHHHHHHHHH---HHHHHHHHHHHh
Confidence 346667778888888877 578999999863
Done!