BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018016
(362 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54IK2|TM120_DICDI Transmembrane protein 120 homolog OS=Dictyostelium discoideum
GN=tmem120 PE=3 SV=1
Length = 368
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 122/243 (50%), Gaps = 35/243 (14%)
Query: 101 AFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRT-------ALLFLLFPST 153
+F P FV++F+G +NV+ R++ + ++K+EY ++ +T +L LL+P +
Sbjct: 119 SFTPETG-SIFVRLFLGQVNVKHMRENEKFRLKQEYEKFKKKTNPQFILFVVLLLLYPQS 177
Query: 154 LLILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLM 213
+ SW Q WLL+ Y LALRENIL +NGS I+PWWI HHY ++
Sbjct: 178 SFVTTSW--------------QIWLLYYYITLALRENILLVNGSSIKPWWIMHHYLSIAG 223
Query: 214 ALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMD 273
+L +L + + + Q V F + QG+ +L NRYQ+ RLY +A+GKA +D
Sbjct: 224 SLTNLLFPLSESFSYFLPQ--VTYF---SGCQGLVQILTNRYQQGRLYKLVAMGKANIID 278
Query: 274 VV-----WGETAGVDGQLWLLCPILFILQGFEAYVGLLLLKTAL--VGVVPEWQVSFCGA 326
V WG G L P L +Q F+ Y A G V EWQV CG
Sbjct: 279 VTGESEGWGNDPGWTPSALFLFPFLLFVQFFQLYNSFSFFAFAYQRSGYV-EWQVFSCGF 337
Query: 327 LLV 329
+ +
Sbjct: 338 IFL 340
>sp|A6QPF8|T120B_BOVIN Transmembrane protein 120B OS=Bos taurus GN=TMEM120B PE=2 SV=1
Length = 339
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 165/353 (46%), Gaps = 48/353 (13%)
Query: 12 EEEEVERV----VEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSIS 67
E +E R+ +EE LQ + ++ IN+ + + L+ L+L R H+S
Sbjct: 21 ELQETHRIYKQKLEELNALQTSCSSSINKQKTRLKDLK---LTLQRYKR------HAS-- 69
Query: 68 STNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKD 127
R +++L ++ ++++ Q + +D +A +LP K G ++ + +G +NV
Sbjct: 70 ------REEAELVQQMGANIKERQNVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQ 120
Query: 128 VQLKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQLYQAWLLFLYTGLA 186
+ K+EY ++ ++ LL + L + D +++ L++ Y L
Sbjct: 121 AKFAYKDEYEKFKLYLTIILLLGAVACRFFLHYRVTD--------EVFNFLLVWYYCTLT 172
Query: 187 LRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQG 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q
Sbjct: 173 IRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQFLAFSIFQS 227
Query: 247 VAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAY 302
LQ YQR LY ALG+ +D+ G +W L P LF ++ Y
Sbjct: 228 CVQFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTFLLPFLFCGHFWQLY 284
Query: 303 VGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK---SRFKAK 352
+ L + + EWQV +++ +GNF+ T++ + TK +R KAK
Sbjct: 285 NAVTLFELSSHEECREWQVFVLALTFLVLFLGNFLTTLKVVHTKLQQNRSKAK 337
>sp|A0PK00|T120B_HUMAN Transmembrane protein 120B OS=Homo sapiens GN=TMEM120B PE=2 SV=1
Length = 339
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 167/356 (46%), Gaps = 45/356 (12%)
Query: 12 EEEEVERVVEEAKELQEAAATLINRT-SSEEQSLRQRALSLDSNIRRLRSLLHSSISSTN 70
E +E R+ ++ E A TL + + S +++ L+ L+L R H+S
Sbjct: 21 ELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLTLQRCKR------HAS----- 69
Query: 71 NLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQL 130
R +++L ++ ++++ Q + +D +A +LP K G ++ + +G +NV +
Sbjct: 70 ---REEAELVQQMAANIKERQDVFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQAKF 123
Query: 131 KVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRE 189
K+EY ++ ++ LL + +L + D +++ L++ Y L +RE
Sbjct: 124 AYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------EVFNFLLVWYYCTLTIRE 175
Query: 190 NILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAM 249
+IL NGS I+ WW+ HHY + ++ V LTW PN Q+ FL +++ Q
Sbjct: 176 SILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGPIYQKFRNQFLAFSIFQSCVQ 230
Query: 250 LLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAYVGL 305
LQ YQR LY ALG+ +D+ G +W L P LF ++ Y +
Sbjct: 231 FLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTFLLPFLFCGHFWQLYNAV 287
Query: 306 LLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAKMKKSKSKPE 361
L + + EWQV +++ +GNF+ T++ + AK++K++ K +
Sbjct: 288 TLFELSSHEECREWQVFVLAFTFLILFLGNFLTTLKVV------HAKLQKNRGKTK 337
>sp|Q3TA38|T120B_MOUSE Transmembrane protein 120B OS=Mus musculus GN=Tmem120b PE=2 SV=1
Length = 339
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 38/368 (10%)
Query: 1 MDEKRSNCEKVEEEEVERVVEEAKELQEAAATLINRTSSEEQSLRQR--ALSLDSNIRRL 58
M + CE+ E E+E E +ELQE I + EE + Q + S+ R L
Sbjct: 1 MSGQLERCER-EWHELE---GEFQELQETHR--IYKQKLEELTSLQTLCSTSISKQKRHL 54
Query: 59 RSLLHSSISSTNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGP 118
+ L H+ + ++ L ++ ++++ Q + +D +A +LP K G ++ + +G
Sbjct: 55 KDLKHTLQRYKRHSSHEEAALIQQMTANIKERQNVFFDMEA--YLPKK-NGLYLNLVLGN 111
Query: 119 INVRASRKDVQLKVKEEYNSYRDRTALLFLLFP-STLLILRSWIWDGCLPAFPVQLYQAW 177
++V + K+EY ++ ++ LL + +L + D +++
Sbjct: 112 VSVTLLSNQAKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTD--------EVFNFL 163
Query: 178 LLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQL 237
L++ Y L +RE+IL NGS I+ WW+ HHY + ++ V LTW PN Q+
Sbjct: 164 LVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PNGLIYQKFRNQ 218
Query: 238 FLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPIL 293
FL +++ Q LQ YQR LY ALG+ +D+ G +W L P L
Sbjct: 219 FLAFSIFQSCVQFLQYYYQRGCLYRLRALGERNHLDLT---VEGFQSWMWRGLTFLLPFL 275
Query: 294 FILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAKM 353
F ++ Y + L + + EWQV +++ +GNF+ T++ + AK+
Sbjct: 276 FCGHFWQLYNAVTLFELSTHEECKEWQVFVLALTFLILFLGNFLTTLKVV------HAKL 329
Query: 354 KKSKSKPE 361
K+++K +
Sbjct: 330 HKNRNKTK 337
>sp|A3KNK1|T120A_DANRE Transmembrane protein 120A OS=Danio rerio GN=tmem120a PE=2 SV=1
Length = 341
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 20 VEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNLLRFDSKL 79
+EE +LQE+ ++ I R R++ L ++ + ++ D
Sbjct: 36 LEEVSKLQESCSSSIARQ-------RKKLKDLSESLEECKGAVNPE----------DVNK 78
Query: 80 ADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSY 139
D ++E +++ + ++ AFLP K G ++ + +G +NV K + K+EY +
Sbjct: 79 IDDIQESIKERPNVFFE--MEAFLPKK-NGLYLSLVLGNVNVTLLNKQSKFAYKDEYEKF 135
Query: 140 RDRTALLFLLFPSTLLILRSW-IWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSD 198
+ +L L F T L S+ + D L+ L++ Y L +RE+IL NGS
Sbjct: 136 KLYLTVLLLFFSFTCRFLVSYRVVDA--------LFNFLLVWYYCTLTIRESILINNGSK 187
Query: 199 IRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQ 258
I+ WW++ HY + ++ V LTW P+ Q FL ++M Q YQ
Sbjct: 188 IKGWWVFQHYVSTFLSGVMLTW-----PDGELYQMFRNQFLSYSMYINFVQFFQYYYQSG 242
Query: 259 RLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTALVG 314
LY ALG+ MD+ G +W L P LF+ F+ Y G+ L + +
Sbjct: 243 CLYRLRALGERHNMDLT---VEGFQSWMWRGLTFLLPFLFLGHFFQLYNGITLFQMTQLP 299
Query: 315 VVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAKMK 354
EWQV CG+ +++ +GNF T+ + K + K K
Sbjct: 300 EWKEWQVLMCGSTFLVLFMGNFFTTLGVVYHKYMDQDKAK 339
>sp|Q1LY80|T120B_DANRE Transmembrane protein 120B OS=Danio rerio GN=tmem120b PE=2 SV=1
Length = 337
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 33/347 (9%)
Query: 9 EKVEEEEVERVVEEAKELQEAAATLINRTSSEE----QSLRQRALSLD-SNIRRLRSLLH 63
E+ + E E + +E ++LQE + R EE Q++ A+S ++ L+ L+
Sbjct: 4 ERCQSEWTE-IEQEYQQLQETHK--VYRQKLEELTNLQAICSSAISKQRKGLKDLKQSLY 60
Query: 64 SSISSTNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRA 123
S N DS++ + L+ +++ Q + +D +A +LP K G ++ + +G +NV
Sbjct: 61 KCKKSCNGK---DSEVINDLQVQIKERQNVFFDMEA--YLP-KRNGLYLNLVLGNVNVTL 114
Query: 124 SRKDVQLKVKEEYNSYRDRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLYQAWLLFLYT 183
+ K+EY ++ ++ + T L L ++ +++ L++ Y
Sbjct: 115 LSNQAKFAYKDEYEKFKLYMTIILMFGAVTCLFLLNY-------RVTDEIFNFLLVWYYC 167
Query: 184 GLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAM 243
L +RE+ILR NGS I+ WW+ HHY + ++ V LTW P Q FL +++
Sbjct: 168 TLTIRESILRSNGSRIKGWWVSHHYVSTFLSGVMLTW-----PEGPMYQMFRSQFLAFSI 222
Query: 244 MQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGF 299
Q LQ YQ LY ALG+ ++D+ G +W L P LF +
Sbjct: 223 YQSCVQFLQYYYQSGCLYRLRALGERNQLDLT---VEGFQSWMWRGLTFLLPFLFFGHFW 279
Query: 300 EAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK 346
+ Y + L + + + EWQV +++ +GNF+ T++ + K
Sbjct: 280 QLYNAVTLFRLSALDDCKEWQVFMLALTFLVLFLGNFLTTLKVVHQK 326
>sp|Q9U1M2|TM120_DROME Transmembrane protein 120 homolog OS=Drosophila melanogaster
GN=CG32795 PE=1 SV=1
Length = 387
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 23/281 (8%)
Query: 76 DSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEE 135
D + D L + K + +++ + S LP+K+ G ++++ +G +NV ++ +++ K++
Sbjct: 70 DKEKVDDLHKMTLKRKAQLHEIEQS--LPAKS-GRYLQIILGDVNVSILNRNDKVRYKDD 126
Query: 136 YNSYRDRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRIN 195
Y ++ ++ L+ LI + AF L ++ Y L +RE+IL++N
Sbjct: 127 YEKFKLILNVIGLIMAFFNLIFN---YRALELAFIFLL-----VWYYCTLTIRESILKVN 178
Query: 196 GSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRY 255
GS I+ WW HH+ + + A V L W P Q F+ + + + LQ Y
Sbjct: 179 GSRIKGWWRAHHFISTVAAGVLLVW-----PQGEHWQIFRMQFMYFNVYISIVQYLQFGY 233
Query: 256 QRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTA 311
Q+ LY ALG+ MD+ G +W L P LFI G++AY L K A
Sbjct: 234 QKGLLYRLKALGERHNMDIT---IEGFHSWMWRGLSFLLPFLFIGYGYQAYNAWTLYKLA 290
Query: 312 LVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAK 352
W VS L +L+ VGN T+ + K R +AK
Sbjct: 291 YSPPDAPWHVSVMSGLFLLLFVGNMATTLWVVPEKIRERAK 331
>sp|Q5FWV6|T120A_XENTR Transmembrane protein 120A OS=Xenopus tropicalis GN=tmem120a PE=2
SV=2
Length = 336
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 153/351 (43%), Gaps = 41/351 (11%)
Query: 3 EKRSNCEKVEEEE--VERVVEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRS 60
E + N + ++E ++ +EE +LQ + I R + + L S+++ +
Sbjct: 15 ELQENYQDIQETHRLYKQKLEELAKLQTRCSGTIARQKKKLKELSVELKKYKSSVKNVEE 74
Query: 61 LLHSSISSTNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPIN 120
IS NN +R K ++E +FLP K G ++ + +G +N
Sbjct: 75 E-EEQISVLNNQIRIREKTFFEME----------------SFLPKK-NGLYLSLVLGNVN 116
Query: 121 VRASRKDVQLKVKEEYNSYR-DRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLYQAWLL 179
V K + K+EY ++ T +L +L +L S + D ++ L+
Sbjct: 117 VTLLSKQSKFAYKDEYEKFKLYLTMILMVLSFICRFVLNSRVTDA--------VFNFLLV 168
Query: 180 FLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFL 239
+ Y L +RE+IL NGS I+ WW+ +HY + ++ V LTW P+ Q FL
Sbjct: 169 WYYCTLTIRESILINNGSRIKGWWVLNHYISTFLSGVMLTW-----PDGLMYQMFRNQFL 223
Query: 240 QWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFI 295
++M Q LQ YQ LY ALG+ MD+ G +W L P LF
Sbjct: 224 SFSMYQSFVQFLQYYYQSGCLYRLRALGERHNMDLT---VEGFQSWMWRGLTFLLPFLFF 280
Query: 296 LQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK 346
Q ++ Y + L K A EWQV CG ++ +GNF T++ + K
Sbjct: 281 GQFWQLYNAITLFKLARHPECKEWQVIMCGLPFLVHFLGNFFTTLRVVHQK 331
>sp|A1L2R7|T120A_XENLA Transmembrane protein 120A OS=Xenopus laevis GN=tmem120a PE=2 SV=1
Length = 336
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 158/353 (44%), Gaps = 45/353 (12%)
Query: 3 EKRSNCEKVEEEE--VERVVEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRS 60
E + N + ++E ++ +EE +LQ + I+R +++ LR+ ++ L + ++
Sbjct: 15 EIQENYQDIQETHRLYKQKLEELSKLQTRCSGTISR---QKKKLRELSVELKKCKSKAKN 71
Query: 61 LLHSS--ISSTNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGP 118
+ I NN +R K ++E +FLP K G ++ + +G
Sbjct: 72 VEEEEEQIRDLNNQIRAREKTFFEME----------------SFLPKK-NGLYLSLVLGN 114
Query: 119 INVRASRKDVQLKVKEEYNSYR-DRTALLFLLFPSTLLILRSWIWDGCLPAFPVQLYQAW 177
+NV K + K+EY ++ T +L +L +L S + D ++
Sbjct: 115 VNVTLLSKQAKFAYKDEYEKFKLYLTIILMVLSFICRFLLNSRVTDA--------VFNFL 166
Query: 178 LLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQL 237
L++ Y L +RE+IL NGS I+ WW+ +HY + ++ V LTW P+ Q
Sbjct: 167 LVWYYCTLTIRESILINNGSRIKGWWVLNHYISTFLSGVMLTW-----PDGLMYQMFRNQ 221
Query: 238 FLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPIL 293
FL ++M Q LQ YQ LY ALG+ MD+ G +W L P L
Sbjct: 222 FLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHNMDLT---VEGFQSWMWRGLTFLLPFL 278
Query: 294 FILQGFEAYVGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTK 346
F Q ++ Y + L K A EWQV CG ++ +GNF T++ + K
Sbjct: 279 FFGQFWQLYNAITLFKLARHPECKEWQVIMCGLPFLVHFLGNFFTTLRVVHQK 331
>sp|Q8C1E7|T120A_MOUSE Transmembrane protein 120A OS=Mus musculus GN=Tmem120a PE=2 SV=1
Length = 343
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 35/276 (12%)
Query: 14 EEVERVVE-EAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNL 72
+E R+ + +EL + A N + +++ L++ AL L ++ R L S
Sbjct: 27 QETHRLYRLKLEELTKLQANCTNSITRQKKRLQELALVL----KKCRPSLPSE------- 75
Query: 73 LRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKV 132
+ A +LE +++ Q L +D +A +LP K G ++ + +G +NV K +
Sbjct: 76 ---SMEAAQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAY 129
Query: 133 KEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENI 191
K+EY ++ ++ ++ T +L S + D + L++ Y L +RE+I
Sbjct: 130 KDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRESI 181
Query: 192 LRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLL 251
L NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q L
Sbjct: 182 LINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFL 236
Query: 252 QNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 287
Q YQ LY ALG+ MD+ G +W
Sbjct: 237 QYYYQSGCLYRLRALGERHTMDLT---VEGFQSWMW 269
>sp|Q5HZE2|T120A_RAT Transmembrane protein 120A OS=Rattus norvegicus GN=Tmem120a PE=2
SV=1
Length = 343
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 38/278 (13%)
Query: 12 EEEEVERV-VEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTN 70
E + RV +EE +LQ+ I R +++ L++ AL L ++ R L S
Sbjct: 28 ETHRLYRVKLEELTKLQDNCTNSITR---QKKRLQELALVL----KKCRPSLPSE----- 75
Query: 71 NLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQL 130
+ A +LE +++ Q L +D +A +LP K G ++ + +G +NV K +
Sbjct: 76 -----SLEAAQELESQIKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKF 127
Query: 131 KVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRE 189
K+EY ++ ++ ++ T +L S + D + L++ Y L +RE
Sbjct: 128 AYKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRE 179
Query: 190 NILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAM 249
+IL NGS I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q
Sbjct: 180 SILINNGSRIKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQ 234
Query: 250 LLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 287
LQ YQ LY ALG+ MD+ G +W
Sbjct: 235 FLQYYYQSGCLYRLRALGERHTMDLT---VEGFQSWMW 269
>sp|Q6DE21|T12BB_XENLA Transmembrane protein 120B-B OS=Xenopus laevis GN=tmem120b-b PE=2
SV=1
Length = 335
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 164/353 (46%), Gaps = 35/353 (9%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALS--LDSNIRRLRSL---LHSSIS 67
+EE + +E ++LQE + + EE S Q S ++ + RRL L LH
Sbjct: 7 QEEWGELEKEFQQLQETHK--VYKQKLEELSSLQNLCSSYINKHKRRLTELKGNLHG-YK 63
Query: 68 STNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKD 127
T+NL + +L +++ +++ +D +A +LP K ++ + +G +NV K
Sbjct: 64 HTSNLE--EKELIQQIDGTIKERHNAFFDMEA--YLPKK-NSLYLNLVLGNVNVTLLSKQ 118
Query: 128 VQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLA 186
+ K+EY ++ ++ LL T +L + D +++ L++ + L
Sbjct: 119 TKFAYKDEYEKFKLYLTIILLLGAITCRFVLHYRVTD--------EVFNFLLVWYFCTLT 170
Query: 187 LRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQG 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q FL +++ Q
Sbjct: 171 IRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQMFRNQFLAFSIFQS 225
Query: 247 VAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAY 302
LQ YQ LY ALG+ + + G +W L P+LF ++ Y
Sbjct: 226 CVQFLQYYYQSGCLYRLRALGERNHLHLT---VEGFQSWMWRGLTFLLPVLFFGHFWQLY 282
Query: 303 VGLLLLKTALVGVVPEWQVSFCGALLVLMAVGNFINTVQTLMTKSRFKAKMKK 355
+ L + EWQV +L+ +GNF+ T++ + TK + K K+KK
Sbjct: 283 NAMTLFGLSRHEECKEWQVFVLALTFLLLFLGNFLTTLKVVHTKFQ-KNKLKK 334
>sp|Q9BXJ8|T120A_HUMAN Transmembrane protein 120A OS=Homo sapiens GN=TMEM120A PE=2 SV=1
Length = 343
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 24/250 (9%)
Query: 80 ADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSY 139
A +LE +++ Q L +D +A +LP K G ++ + +G +NV K + K+EY +
Sbjct: 80 AQELENQMKERQGLFFDMEA--YLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKF 136
Query: 140 RDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSD 198
+ ++ +L T +L S + D + L++ Y L +RE+IL NGS
Sbjct: 137 KLYLTIILILISFTCRFLLNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGSR 188
Query: 199 IRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQ 258
I+ WW++HHY + ++ V LTW P+ Q+ FL ++M Q LQ YQ
Sbjct: 189 IKGWWVFHHYVSTFLSGVMLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSG 243
Query: 259 RLYTRIALGKAKRMDVVWGETAGVDGQLW----LLCPILFILQGFEAYVGLLLLKTALVG 314
LY ALG+ MD+ G +W L P LF ++ + L L A
Sbjct: 244 CLYRLRALGERHTMDLT---VEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAQDP 300
Query: 315 VVPEWQVSFC 324
EWQV C
Sbjct: 301 QCKEWQVLMC 310
>sp|Q05B45|T120A_BOVIN Transmembrane protein 120A OS=Bos taurus GN=TMEM120A PE=2 SV=1
Length = 343
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 98 DASAFLPSKAQGAFVKMFIGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSTL-LI 156
D A+LP K G ++ + +G +NV K + K+EY ++ ++ +L T +
Sbjct: 96 DMEAYLPKK-NGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFL 154
Query: 157 LRSWIWDGCLPAFPVQLYQAWLLFLYTGLALRENILRINGSDIRPWWIYHHYCAMLMALV 216
L S + D + L++ Y L +RE+IL NGS I+ WW++HHY + ++ V
Sbjct: 155 LNSRVTDAA--------FNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGV 206
Query: 217 SLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTRIALGKAKRMDVVW 276
LTW P+ Q+ FL ++M Q LQ YQ LY ALG+ MD+
Sbjct: 207 MLTW-----PDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLT- 260
Query: 277 GETAGVDGQLW 287
G +W
Sbjct: 261 --VEGFQSWMW 269
>sp|Q5EAX9|T12BA_XENLA Transmembrane protein 120B-A OS=Xenopus laevis GN=tmem120b-a PE=2
SV=1
Length = 335
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 30/281 (10%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALS--LDSNIRRLRSL---LHSSIS 67
+EE + +E ++LQE + + EE + Q S ++ + RRL LH +
Sbjct: 7 QEEWSEIEKEFQQLQETHK--VYKQKLEELNSLQNLCSSCINKHKRRLTEFKGNLHG-LK 63
Query: 68 STNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKD 127
T+NL + +L +++ +++ + +D +A +LP K G ++ + +G +NV
Sbjct: 64 RTSNLE--EKELVQQIDGTIKERRNAFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSTQ 118
Query: 128 VQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLA 186
+ K+EY ++ ++ LL T +L + D +++ L++ Y L
Sbjct: 119 AKFAYKDEYEKFKLYLTIILLLGAITCRFVLNYRVTD--------EVFNFLLVWYYCTLT 170
Query: 187 LRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQG 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q FL +++ Q
Sbjct: 171 IRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQIFRNQFLAFSIFQS 225
Query: 247 VAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 287
LQ YQ LY ALG+ +D+ G +W
Sbjct: 226 CVQFLQYYYQSGCLYRLRALGERNHLDLT---VEGFQSWMW 263
>sp|Q63ZG0|T120B_XENTR Transmembrane protein 120B OS=Xenopus tropicalis GN=tmem120b PE=2
SV=1
Length = 335
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 30/281 (10%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALS--LDSNIRRLRSL---LHSSIS 67
+EE + +E ++LQE + + EE + Q S ++ + RRL L LH
Sbjct: 7 QEEWGELEKEFQQLQETHK--VYKQKLEELNGLQNLCSSYINKHKRRLTELKGNLHGYKH 64
Query: 68 STNNLLRFDSKLADKLEEDLQKAQCLIYDGDASAFLPSKAQGAFVKMFIGPINVRASRKD 127
++N + +L ++ +++ +D +A +LP K G ++ + +G +NV
Sbjct: 65 TSNVE---EKELVQQINSTIKERHNAFFDMEA--YLPKK-NGLYLNLVLGNVNVTLLSNQ 118
Query: 128 VQLKVKEEYNSYRDRTALLFLLFPSTL-LILRSWIWDGCLPAFPVQLYQAWLLFLYTGLA 186
+ K+EY ++ ++ LL T +L + D +++ L++ Y L
Sbjct: 119 AKFAYKDEYEKFKLYLTIILLLGAITCRFVLHYRVTD--------EVFNFLLVWYYCTLT 170
Query: 187 LRENILRINGSDIRPWWIYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQG 246
+RE+IL NGS I+ WW+ HHY + ++ V LTW P+ Q FL +++ Q
Sbjct: 171 IRESILISNGSRIKGWWVSHHYVSTFLSGVMLTW-----PDGLMYQIFRNQFLAFSIYQS 225
Query: 247 VAMLLQNRYQRQRLYTRIALGKAKRMDVVWGETAGVDGQLW 287
LQ YQ LY ALG+ +D+ G +W
Sbjct: 226 CVQFLQYYYQSGCLYRLRALGERNHLDLT---VEGFQSWMW 263
>sp|Q9Y4B5|SOGA2_HUMAN Protein SOGA2 OS=Homo sapiens GN=SOGA2 PE=1 SV=5
Length = 1905
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 1 MDEKRSNCEKVEEEEVERVVEE-------AKELQEAAATLINRTSSEEQSLRQRALSLDS 53
++EKR+ E E ++++E EL+ + + R S+ E ++ + D
Sbjct: 442 VEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTFNQDD 501
Query: 54 NIRRLRSLLHSSISSTNNLLRFDSKLA---DKLEEDLQKAQCLIYDGDASAFLPSKAQGA 110
+ LR L + + + +KL D+LE++LQK + L GD + LP+ G
Sbjct: 502 SAD-LRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLY--GDVDSPLPTGEAG- 557
Query: 111 FVKMFIGPINVRASRKDVQLKVKEE 135
GP + R + ++LK+ EE
Sbjct: 558 ------GPPSTREAELKLRLKLVEE 576
>sp|Q9Z735|RIBD_CHLPN Riboflavin biosynthesis protein RibD OS=Chlamydia pneumoniae
GN=ribD PE=3 SV=1
Length = 376
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 204 IYHHYCAMLMALVSLTWEIKGQPNCAQKQRGVQLFLQWAMMQGVAMLLQNRYQRQRLYTR 263
I H + +ALV ++ GQ +Q G+Q+++ + A L YQR +
Sbjct: 94 IKHKVSRVFVALVDPDPKVAGQGIAMLRQAGIQVYVGIGESEAQASLQPYLYQRTHNFPW 153
Query: 264 IALGKAKRMDVVWGETAGVDGQL-WLLCP 291
L A +D G+ A G+ W+ CP
Sbjct: 154 TILKSAASVD---GQVADSQGKSQWITCP 179
>sp|O13921|MSH1_SCHPO MutS protein homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=msh1 PE=3 SV=2
Length = 941
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 21/88 (23%)
Query: 12 EEEEVERVVEEAKEL---QEAAATLINRTSSEEQSLRQR-------ALSLDSNIRRLRSL 61
EEEE E + +EA+E+ + A ++ ++ S E +RQ + ++N+R+L
Sbjct: 504 EEEETEVIAQEAEEILQDENAQVEIVKKSLSSEFDIRQSFKENWVVKSNFNNNLRKLHEK 563
Query: 62 LHSSISSTNNLLRFDSKLADKLEEDLQK 89
L S +S DKL+EDL K
Sbjct: 564 LQSLFAS-----------YDKLQEDLSK 580
>sp|Q54K81|TALB_DICDI Talin-B OS=Dictyostelium discoideum GN=talB PE=2 SV=1
Length = 2614
Score = 32.3 bits (72), Expect = 5.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 13 EEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNL 72
+ +V ++ KE+ E + L+N T+ +Q ++ LDS + ++LL +S S+ N +
Sbjct: 1484 QADVSQLAATKKEVSELISKLLNATNGHDQDATTISIDLDSLSKSEQALLDASRSTANYM 1543
Query: 73 LRF 75
+F
Sbjct: 1544 SQF 1546
>sp|Q7VRU2|DNLJ_BLOFL DNA ligase OS=Blochmannia floridanus GN=ligA PE=3 SV=1
Length = 594
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 10 KVEEEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLH-SSISS 68
KV +EE + ++EE ++L+ LI ++SS QS+ + + IR + +L +SI
Sbjct: 29 KVSDEEYDILLEELRQLEFKYPYLITKSSS-TQSISNVCDNSLNRIRHQKPMLSLNSIRD 87
Query: 69 TNNLLRFDSKLADKLEEDLQKAQCLI 94
+ LL FD ++ KL Q LI
Sbjct: 88 KSQLLLFDKRIKYKLSNHYNINQNLI 113
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 32.3 bits (72), Expect = 6.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 26 LQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNLLRFDSKLADKLEE 85
+QE ++L + R R ++ + LR L+ ++ +T +S+ ++LEE
Sbjct: 2352 VQEQLSSLWEENQALATQTRDRLAQHEAGLMDLREALNRAVDATREAQELNSRNQERLEE 2411
Query: 86 DLQKAQCLIYD 96
LQ+ Q L D
Sbjct: 2412 ALQRKQELSRD 2422
>sp|Q03684|BIP4_TOBAC Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1
Length = 667
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 19/77 (24%)
Query: 10 KVEEEEVERVVEEAKELQEAAATLINRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISST 69
++ +EE+ER+V+EA+E E E++ +++R +D+ R+ L + + +
Sbjct: 542 RLSQEEIERMVKEAEEFAE-----------EDKKVKER---IDA-----RNSLETYVYNM 582
Query: 70 NNLLRFDSKLADKLEED 86
N + KLADKLE D
Sbjct: 583 RNQINDKDKLADKLESD 599
>sp|Q03QY8|ATPB_LACBA ATP synthase subunit beta OS=Lactobacillus brevis (strain ATCC 367
/ JCM 1170) GN=atpD PE=3 SV=1
Length = 471
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 15 EVERVVEEAKELQEAAATL-INRTSSEEQSLRQRALSLDSNIRRLRSLLHSSISSTNNLL 73
EV+RV++ ELQ+ + L ++ S EEQ++ QRA RR++ L S +
Sbjct: 364 EVQRVLQRYHELQDIISILGMDELSDEEQTIVQRA-------RRIQFFLSQPFSVASQFT 416
Query: 74 RFDSKLADKLEEDLQKAQCLIYDG 97
D K KLE+ ++ + ++ DG
Sbjct: 417 GMDGKYV-KLEDTIRSFKGIL-DG 438
>sp|P77172|YFGF_ECOLI Cyclic di-GMP phosphodiesterase YfgF OS=Escherichia coli (strain
K12) GN=yfgF PE=1 SV=1
Length = 747
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 234 GVQLFLQWAMMQGVAM-LLQNRYQRQRLYTRIALG-----------------KAKRMDVV 275
+ +F WA + G+A+ + +Y Y ++L +R +V
Sbjct: 55 SMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVS 114
Query: 276 WGETAGVDGQLW--LLCP--ILFILQGFEAYVGLLLLKTALVGVVP 317
G+T + +++ ++ P + IL F A+VGLL + LVGV+P
Sbjct: 115 HGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMP 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,595,771
Number of Sequences: 539616
Number of extensions: 4695649
Number of successful extensions: 25440
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 25230
Number of HSP's gapped (non-prelim): 233
length of query: 362
length of database: 191,569,459
effective HSP length: 119
effective length of query: 243
effective length of database: 127,355,155
effective search space: 30947302665
effective search space used: 30947302665
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)