Query 018019
Match_columns 362
No_of_seqs 301 out of 2545
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 08:37:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 1.6E-33 5.6E-38 275.9 22.4 257 2-333 20-298 (451)
2 3juk_A UDP-glucose pyrophospho 100.0 1E-32 3.6E-37 253.7 21.5 239 1-333 1-272 (281)
3 3brk_X Glucose-1-phosphate ade 100.0 2.5E-31 8.5E-36 258.1 23.4 247 2-333 12-287 (420)
4 4ecm_A Glucose-1-phosphate thy 100.0 8.3E-30 2.8E-34 232.9 24.4 234 2-332 24-260 (269)
5 1tzf_A Glucose-1-phosphate cyt 100.0 1.6E-29 5.6E-34 229.4 23.9 229 1-332 1-251 (259)
6 3st8_A Bifunctional protein GL 100.0 2E-29 6.7E-34 250.0 23.4 187 3-227 13-205 (501)
7 2e3d_A UTP--glucose-1-phosphat 100.0 3E-28 1E-32 226.2 24.8 234 3-331 9-281 (302)
8 2ux8_A Glucose-1-phosphate uri 100.0 8.5E-29 2.9E-33 229.4 17.8 239 2-332 14-280 (297)
9 2pa4_A UTP-glucose-1-phosphate 100.0 3.7E-28 1.3E-32 227.7 20.8 239 2-331 12-282 (323)
10 3pnn_A Conserved domain protei 100.0 8.9E-28 3E-32 223.0 22.5 253 1-333 4-293 (303)
11 1fxo_A Glucose-1-phosphate thy 100.0 6.9E-27 2.4E-31 215.9 23.0 185 1-223 1-186 (293)
12 1lvw_A Glucose-1-phosphate thy 99.9 5.7E-26 1.9E-30 209.9 25.1 184 2-223 3-187 (295)
13 1hm9_A GLMU, UDP-N-acetylgluco 99.9 1.9E-26 6.6E-31 226.6 22.5 229 3-331 12-250 (468)
14 4evw_A Nucleoside-diphosphate- 99.9 1.8E-26 6.2E-31 209.0 19.0 222 5-327 2-243 (255)
15 2qh5_A PMI, ALGA, mannose-6-ph 99.9 8.7E-27 3E-31 217.0 16.4 192 1-225 3-203 (308)
16 1mc3_A Glucose-1-phosphate thy 99.9 4.5E-26 1.6E-30 210.6 19.7 183 3-223 4-187 (296)
17 2ggo_A 401AA long hypothetical 99.9 4.6E-26 1.6E-30 219.6 17.9 219 3-333 1-226 (401)
18 2v0h_A Bifunctional protein GL 99.9 4.8E-25 1.6E-29 215.9 20.5 231 1-331 4-241 (456)
19 4fce_A Bifunctional protein GL 99.9 5.6E-25 1.9E-29 215.6 18.7 180 1-226 7-189 (459)
20 1jyk_A LICC protein, CTP:phosp 99.9 1.4E-24 4.9E-29 196.5 15.9 168 1-223 24-193 (254)
21 3oam_A 3-deoxy-manno-octuloson 99.9 5.9E-24 2E-28 192.2 19.8 191 1-226 1-198 (252)
22 2x65_A Mannose-1-phosphate gua 99.9 5.4E-24 1.9E-28 200.0 15.5 190 3-224 2-204 (336)
23 2cu2_A Putative mannose-1-phos 99.9 7.4E-24 2.5E-28 199.2 13.1 183 1-224 1-201 (337)
24 3k8d_A 3-deoxy-manno-octuloson 99.9 2.6E-21 8.8E-26 175.6 21.7 190 1-225 17-213 (264)
25 3tqd_A 3-deoxy-manno-octuloson 99.9 1.9E-21 6.6E-26 175.6 18.9 190 1-225 8-206 (256)
26 2y6p_A 3-deoxy-manno-octuloson 99.8 1.5E-19 5.1E-24 161.1 19.3 178 1-225 1-182 (234)
27 4fcu_A 3-deoxy-manno-octuloson 99.8 5.7E-19 1.9E-23 159.2 18.2 187 3-225 2-198 (253)
28 1vic_A 3-deoxy-manno-octuloson 99.8 3.1E-18 1.1E-22 155.4 22.4 189 1-225 1-201 (262)
29 1h7e_A 3-deoxy-manno-octuloson 99.8 3.8E-18 1.3E-22 153.0 21.4 181 1-224 1-187 (245)
30 2xme_A CTP-inositol-1-phosphat 99.8 1.8E-17 6E-22 147.6 17.0 167 2-223 18-186 (232)
31 3f1c_A Putative 2-C-methyl-D-e 99.8 1.2E-17 4.2E-22 150.1 16.0 128 2-136 3-140 (246)
32 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 2.3E-17 8E-22 146.9 16.9 124 3-131 3-136 (236)
33 1ezi_A CMP-N-acetylneuraminic 99.7 1.7E-17 5.8E-22 147.3 10.6 124 1-140 3-136 (228)
34 2xwl_A 2-C-methyl-D-erythritol 99.7 1.1E-16 3.6E-21 141.4 15.2 125 1-138 1-129 (223)
35 2icy_A Probable UTP-glucose-1- 99.7 1.2E-15 4.3E-20 147.8 17.0 193 2-226 79-310 (469)
36 2wee_A MOBA-related protein; u 99.7 3.4E-16 1.2E-20 135.3 11.1 118 1-133 4-126 (197)
37 2waw_A MOBA relate protein; un 99.7 5.2E-16 1.8E-20 134.4 12.0 119 1-134 4-127 (199)
38 2i5k_A UTP--glucose-1-phosphat 99.7 1.6E-15 5.4E-20 147.9 16.0 193 2-226 92-323 (488)
39 3rsb_A Adenosylcobinamide-phos 99.7 9.1E-17 3.1E-21 139.1 6.3 128 3-139 1-135 (196)
40 2yc3_A 2-C-methyl-D-erythritol 99.6 1.6E-15 5.4E-20 134.4 10.8 120 2-131 4-128 (228)
41 2dpw_A Hypothetical protein TT 99.6 1.1E-15 3.8E-20 136.0 8.5 118 1-139 1-120 (232)
42 1vgw_A 4-diphosphocytidyl-2C-m 99.6 4.2E-15 1.5E-19 131.8 11.7 119 1-130 5-133 (231)
43 1qwj_A Cytidine monophospho-N- 99.6 6.5E-15 2.2E-19 130.8 12.8 122 1-138 2-132 (229)
44 1jv1_A Glcnac1P uridyltransfer 99.6 6.3E-14 2.1E-18 137.2 18.1 194 2-226 102-344 (505)
45 1e5k_A Molybdopterin-guanine d 99.6 2.2E-14 7.4E-19 124.8 11.8 115 1-134 5-123 (201)
46 3d5n_A Q97W15_sulso; NESG, SSR 99.6 5.6E-15 1.9E-19 128.1 7.8 114 1-133 1-118 (197)
47 3q80_A 2-C-methyl-D-erythritol 99.5 2.5E-13 8.6E-18 120.5 16.9 113 3-128 8-127 (231)
48 1i52_A 4-diphosphocytidyl-2-C- 99.5 7E-15 2.4E-19 131.0 6.6 119 1-130 6-128 (236)
49 1vpa_A 2-C-methyl-D-erythritol 99.5 8.9E-14 3.1E-18 123.5 11.5 118 3-131 14-137 (234)
50 2px7_A 2-C-methyl-D-erythritol 99.5 8.8E-14 3E-18 124.0 8.6 112 1-132 24-137 (236)
51 2e8b_A Probable molybdopterin- 99.4 7E-14 2.4E-18 121.6 6.6 103 2-123 14-120 (201)
52 3ngw_A Molybdopterin-guanine d 99.4 5.1E-13 1.8E-17 116.7 11.8 114 3-135 1-117 (208)
53 1w55_A ISPD/ISPF bifunctional 99.4 1.9E-13 6.5E-18 129.3 9.0 114 1-130 2-118 (371)
54 2oeg_A UTP-glucose-1-phosphate 99.4 4.6E-12 1.6E-16 123.4 14.0 195 2-226 75-323 (505)
55 2yqc_A UDP-N-acetylglucosamine 99.2 1.6E-10 5.4E-15 112.8 16.8 192 2-225 103-351 (486)
56 3oc9_A UDP-N-acetylglucosamine 99.2 7.3E-10 2.5E-14 104.8 18.9 191 2-224 35-275 (405)
57 2i5e_A Hypothetical protein MM 97.8 2.7E-05 9.2E-10 67.5 6.0 104 2-124 3-111 (211)
58 3r3i_A UTP--glucose-1-phosphat 97.5 0.0029 9.8E-08 61.5 16.1 191 3-226 128-365 (528)
59 3gue_A UTP-glucose-1-phosphate 97.2 0.016 5.4E-07 55.8 16.9 133 3-140 77-249 (484)
60 3ogz_A UDP-sugar pyrophosphory 97.0 0.0024 8.3E-08 63.1 9.6 132 3-139 115-300 (630)
61 2iu8_A LPXD, UDP-3-O-[3-hydrox 95.1 0.00027 9.1E-09 66.8 -8.0 74 106-221 13-89 (374)
62 1qg8_A Protein (spore coat pol 93.3 1.1 3.8E-05 38.6 12.3 99 28-129 6-116 (255)
63 3bcv_A Putative glycosyltransf 93.1 0.61 2.1E-05 39.8 10.1 106 27-135 9-118 (240)
64 3cgx_A Putative nucleotide-dip 90.0 0.83 2.8E-05 39.9 7.6 87 34-128 37-130 (242)
65 1xhb_A Polypeptide N-acetylgal 89.9 3.4 0.00011 39.4 12.5 103 28-133 34-146 (472)
66 2d7i_A Polypeptide N-acetylgal 86.8 3.9 0.00013 40.3 10.9 103 28-131 117-226 (570)
67 2z86_A Chondroitin synthase; G 85.2 11 0.00036 37.4 13.2 99 28-129 380-482 (625)
68 2ffu_A Ppgalnact-2, polypeptid 81.4 7.5 0.00026 37.4 10.1 100 28-132 71-177 (501)
69 2z86_A Chondroitin synthase; G 76.7 29 0.001 34.1 13.0 103 27-132 97-205 (625)
70 3r8y_A 2,3,4,5-tetrahydropyrid 76.1 0.92 3.2E-05 39.3 1.5 30 300-331 39-69 (240)
71 3ckj_A Putative uncharacterize 68.5 38 0.0013 30.3 10.7 105 28-135 53-167 (329)
72 3f1y_A Mannosyl-3-phosphoglyce 61.4 42 0.0014 31.0 9.7 105 27-138 98-218 (387)
73 4hg6_A Cellulose synthase subu 58.8 61 0.0021 33.2 11.1 99 28-128 145-265 (802)
74 4fix_A UDP-galactofuranosyl tr 56.6 36 0.0012 34.0 8.8 98 29-130 186-297 (657)
75 3nz2_A Hexapeptide-repeat cont 43.2 8.8 0.0003 31.8 1.5 26 337-362 136-161 (195)
76 3l7i_A Teichoic acid biosynthe 41.2 5.6 0.00019 40.3 0.0 97 29-127 8-109 (729)
77 3srt_A Maltose O-acetyltransfe 40.8 10 0.00034 31.3 1.5 27 336-362 135-161 (188)
78 3hjj_A Maltose O-acetyltransfe 39.7 11 0.00037 31.1 1.5 26 337-362 138-163 (190)
79 1krr_A Galactoside O-acetyltra 39.0 11 0.00038 31.6 1.5 25 338-362 136-160 (203)
80 3ftt_A Putative acetyltransfer 38.7 10 0.00035 31.5 1.3 26 337-362 134-159 (199)
81 1ocx_A Maltose O-acetyltransfe 37.9 12 0.00041 30.7 1.5 25 338-362 133-157 (182)
82 2p2o_A Maltose transacetylase; 37.8 12 0.00041 30.8 1.5 25 338-362 135-159 (185)
83 2xvy_A Chelatase, putative; me 36.2 88 0.003 26.9 7.1 25 33-57 63-87 (269)
84 3eev_A Chloramphenicol acetylt 34.0 15 0.00051 30.8 1.5 26 337-362 115-140 (212)
85 4hur_A Virginiamycin A acetylt 32.9 16 0.00054 30.9 1.5 25 338-362 124-148 (220)
86 3tv0_A Dynactin subunit 6; LEF 30.4 18 0.00063 29.7 1.5 22 341-362 110-131 (194)
87 1xat_A Xenobiotic acetyltransf 29.6 20 0.00067 30.3 1.5 25 338-362 115-139 (212)
88 3vbi_A ANTD, galactoside O-ace 25.9 25 0.00085 29.0 1.5 24 339-362 140-163 (205)
89 2pig_A Putative transferase; S 25.8 7.5 0.00026 35.5 -1.9 23 312-334 25-47 (334)
90 3bfp_A Acetyltransferase; LEFT 25.5 70 0.0024 26.1 4.3 18 314-331 52-69 (194)
91 3jqy_B NEUO, polysialic acid O 23.7 25 0.00086 30.3 1.2 24 339-362 169-192 (252)
92 3mqg_A Lipopolysaccharides bio 23.3 30 0.001 28.1 1.6 24 339-362 108-131 (192)
93 1uf3_A Hypothetical protein TT 23.0 2.3E+02 0.0078 22.8 7.2 39 79-117 6-46 (228)
94 2nxv_A ATP synthase subunits r 21.9 3.5E+02 0.012 22.5 8.8 41 88-128 60-101 (249)
95 1mr7_A Streptogramin A acetylt 21.1 36 0.0012 28.5 1.6 24 339-362 119-142 (209)
96 2wlg_A Polysialic acid O-acety 20.9 36 0.0012 28.4 1.6 24 339-362 143-166 (215)
97 4e8l_A Virginiamycin A acetylt 20.5 37 0.0013 28.7 1.6 23 340-362 125-147 (219)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=1.6e-33 Score=275.94 Aligned_cols=257 Identities=19% Similarity=0.302 Sum_probs=186.7
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCc-chHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCC----
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDR---- 76 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~-plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~---- 76 (362)
+|+|||||||.|+||+|| |..+||+|+|++|+ |||+|+|++|.++|+++|+|++++.. +.+.+++...+...
T Consensus 20 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 96 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPL-TKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNS--ASLNRHLSRAYASNMGGY 96 (451)
T ss_dssp HEEEEEC------CCTTT-TTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCC--HHHHHHHHHHCC------
T ss_pred ceEEEEECCCCCCcccch-hcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCH--HHHHHHHhhhhhcccccc
Confidence 478999999999999999 99999999999999 99999999999999999999998753 47777776432101
Q ss_pred ---cceEEEEc--C-----CCCCHHHHHHHHHHhcC---CCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccC
Q 018019 77 ---LHVEVATV--P-----EDVGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVS 143 (362)
Q Consensus 77 ---~~i~i~~~--~-----~~~gt~~al~~~~~~i~---~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~ 143 (362)
..+.++.. . ...|++++++.+++++. .++|+|++||++++.++.++++.|+++++++|+++.+....
T Consensus 97 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~ 176 (451)
T 1yp2_A 97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEK 176 (451)
T ss_dssp --CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHH
T ss_pred cccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChh
Confidence 12445431 1 14799999999988875 47799999999999999999999999899999987665310
Q ss_pred CCcccCCCCCccCCCCCCcceEEEEcCCCcEEEEeecCcccc--cccccchHHHhhcCceee-ecCceeceEEeeCHHHH
Q 018019 144 GLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELE--KDTRIRKSILRAVGQMDI-RADLMDAHMYAFNRSVL 220 (362)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~e--k~~~i~~~~l~~~~~~~~-~~~l~~~giYi~s~~vl 220 (362)
++..|+++.+|+++++ ..+.++++.+ +.++++.+++.+++.... .++++++|+|+|++++|
T Consensus 177 ---------------~~~~~g~v~~d~~~~v-~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l 240 (451)
T 1yp2_A 177 ---------------RATAFGLMKIDEEGRI-IEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVM 240 (451)
T ss_dssp ---------------HHTTSEEEEECTTSBE-EEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHH
T ss_pred ---------------hcccCCEEEECCCCCE-EEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHH
Confidence 1457899999987765 5676544321 112233444433322111 34688999999999998
Q ss_pred HHHHhcC-cccccchhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCce
Q 018019 221 QEVLDQK-DKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRT 299 (362)
Q Consensus 221 ~~~~~~~-~~~~s~~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (362)
..++++. ....++.+|+|+.+++.+
T Consensus 241 ~~~l~~~~~~~~~~~~~~l~~~i~~g------------------------------------------------------ 266 (451)
T 1yp2_A 241 LNLLRDKFPGANDFGSEVIPGATSLG------------------------------------------------------ 266 (451)
T ss_dssp HHHHHTTCTTCCCTTTTHHHHHHHTT------------------------------------------------------
T ss_pred HHHHHhhcccccchHhhHHHHHHhcC------------------------------------------------------
Confidence 7676643 234566778888877531
Q ss_pred eeEEEEEecCCceEEEeCCHHHHHHHhHHHhhhh
Q 018019 300 HKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA 333 (362)
Q Consensus 300 ~~~~~~~~~~~~y~~rin~~~~Y~~~n~~~l~~~ 333 (362)
.++++|.. +|||..|+|+.+|+++|++++...
T Consensus 267 ~~v~~~~~--~~~w~digt~~~l~~a~~~l~~~~ 298 (451)
T 1yp2_A 267 MRVQAYLY--DGYWEDIGTIEAFYNANLGITKKP 298 (451)
T ss_dssp CCEEEEEC--CSCCEECSSHHHHHHHHHGGGCSS
T ss_pred CceEEEEe--CCEEEECCCHHHHHHHHHHHhccc
Confidence 35688877 789999999999999999999754
No 2
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=1e-32 Score=253.71 Aligned_cols=239 Identities=13% Similarity=0.239 Sum_probs=183.4
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhh-c-----
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-V----- 74 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~-~----- 74 (362)
|.|+|||||||.|+||+|+ |..+||+|+||+|||||+|+++++.++|+++|+|++++. .+.+.+++.+.+ .
T Consensus 1 M~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~ 77 (281)
T 3juk_A 1 MIKKCLFPAAGYGTRFLPI-TKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRN--KRSLEDYFDTSYEIEHQIQ 77 (281)
T ss_dssp CCCEEEEECCSCCGGGTTG-GGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTT--HHHHHHHTSCCC-------
T ss_pred CceEEEEECCcCCcccCcc-ccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCC--HHHHHHHHhcchhhhhhhh
Confidence 8899999999999999999 999999999999999999999999999999999999865 357888775411 0
Q ss_pred ---------------CCcceEEEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCcccCCC-----hHHHHHHHHhcCCeEE
Q 018019 75 ---------------DRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-----PGAVTAAHRRHDAVVT 134 (362)
Q Consensus 75 ---------------~~~~i~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-----l~~~l~~h~~~~a~~t 134 (362)
....+.++.++...||+++++.+++++.+++|+|++||.+++.+ +.++++.|++.++ .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~ 156 (281)
T 3juk_A 78 GTNKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SI 156 (281)
T ss_dssp -CCHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CE
T ss_pred cccchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CE
Confidence 01234455566789999999999998876789999999988888 9999999988877 56
Q ss_pred EEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcC--CC--cEEEEeecCcccccccccchHHHhhcCceeeecCceec
Q 018019 135 AMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK--QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDA 210 (362)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~--~~--~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~ 210 (362)
+++...+.. .+..|+++.+|+ +| + +..+.++++.+ ...++++++
T Consensus 157 v~~~~~~~~---------------~~~~~g~v~~~~~~~g~~~-v~~~~Ekp~~~----------------~~~~~~~~~ 204 (281)
T 3juk_A 157 VAIEEVALE---------------EVSKYGVIRGEWLEEGVYE-IKDMVEKPNQE----------------DAPSNLAVI 204 (281)
T ss_dssp EEEEECCTT---------------TGGGSEEEEEEEEETTEEE-EEEEEESCCTT----------------TCSCSEEEE
T ss_pred EEEEEechh---------------hcccCCEEEeccCCCCceE-EeEEEECcCCC----------------CCCcceeEE
Confidence 666554311 256899999886 56 4 45666432211 123578899
Q ss_pred eEEeeCHHHHHHHHhcCc---ccccchhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCccccccc
Q 018019 211 HMYAFNRSVLQEVLDQKD---KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYA 287 (362)
Q Consensus 211 giYi~s~~vl~~~~~~~~---~~~s~~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (362)
|+|+|++++|..+.+... +..++ .|+++.+++..
T Consensus 205 GiYi~~~~~l~~l~~~~~~~~~e~~l-~d~i~~l~~~~------------------------------------------ 241 (281)
T 3juk_A 205 GRYILTPDIFEILSETKPGKNNEIQI-TDALRTQAKRK------------------------------------------ 241 (281)
T ss_dssp EEEEECTTHHHHHHTCCCCGGGSCCH-HHHHHHHHHHS------------------------------------------
T ss_pred EEEEECHHHHHHHHhcCCCCCCceeH-HHHHHHHHhcC------------------------------------------
Confidence 999999999965533211 11223 56777766431
Q ss_pred CCCCCCCCCCceeeEEEEEecCCceEEEeCCHHHHHHHhHHHhhhh
Q 018019 288 LGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA 333 (362)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~y~~rin~~~~Y~~~n~~~l~~~ 333 (362)
++++|.+ +||+..|+|+.+|+++|+.+++..
T Consensus 242 -------------~v~~~~~--~g~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 242 -------------RIIAYQF--KGKRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp -------------CCEEEEC--CSEEEETTSHHHHHHHHHHHHHHH
T ss_pred -------------CEEEEEe--CCeEEcCCCHHHHHHHHHHHHhch
Confidence 3478887 789999999999999999999853
No 3
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=99.98 E-value=2.5e-31 Score=258.12 Aligned_cols=247 Identities=17% Similarity=0.243 Sum_probs=180.6
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCc-chHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhc-C----
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV-D---- 75 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~-plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~-~---- 75 (362)
+|+|||||||.|+||+|| |..+||+|+|++|+ |||+|+|++|.++|+++|+|++++.. +.+.+++.+.+. .
T Consensus 12 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 88 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKEL-TDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKA--HSLIRHLQRGWDFFRPER 88 (420)
T ss_dssp GEEEEEEECCCCGGGGGG-GSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTC--HHHHHHHHHHSCCCCGGG
T ss_pred ceEEEEEcCCCCCccchh-hcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCCh--HHHHHHHhhhhccccccc
Confidence 478999999999999999 99999999999999 99999999999999999999998653 478888875221 1
Q ss_pred CcceEEEEcC----CC---CCHHHHHHHHHHhcC---CCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccCCC
Q 018019 76 RLHVEVATVP----ED---VGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGL 145 (362)
Q Consensus 76 ~~~i~i~~~~----~~---~gt~~al~~~~~~i~---~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~ 145 (362)
..++.++... ++ .|++++++.+++++. .++|++++||.+++.++.++++.|+++++++|+++.+.+..
T Consensus 89 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~-- 166 (420)
T 3brk_X 89 NESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRM-- 166 (420)
T ss_dssp TCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETT--
T ss_pred cCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCcc--
Confidence 1134444321 23 799999999988774 36799999999899999999999999899999888765321
Q ss_pred cccCCCCCccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHh
Q 018019 146 SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
++..|+++.+|+++++ ..+.+++...... . ....+++.++|+|+|++++|..+++
T Consensus 167 -------------~~~~~g~v~~d~~g~v-~~~~ekp~~~~~~----~-------~~~~~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 167 -------------EATGFGVMHVNEKDEI-IDFIEKPADPPGI----P-------GNEGFALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp -------------GGGGSEEEEECTTSBE-EEEEESCSSCCCB----T-------TBTTEEEEEEEEEEEEHHHHHHHHT
T ss_pred -------------ccCcccEEEECCCCcE-EEeEeCCCccccc----c-------ccccceEEeeeeEEEeHHHHHHHHH
Confidence 1457899999987765 5666432111100 0 0112478999999999999876665
Q ss_pred cCc----ccccchhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceee
Q 018019 226 QKD----KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHK 301 (362)
Q Consensus 226 ~~~----~~~s~~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (362)
+.. ...++..|+++.+++++ +
T Consensus 222 ~~~~~~~~~~~~~~d~l~~li~~g-------------------------------------------------------~ 246 (420)
T 3brk_X 222 RDAADPTSSRDFGKDIIPYIVEHG-------------------------------------------------------K 246 (420)
T ss_dssp SSCCC----------CTTHHHHHS-------------------------------------------------------C
T ss_pred HhcccCCccccchHHHHHHHhhhC-------------------------------------------------------c
Confidence 421 12345568888877542 3
Q ss_pred EEEEEec---------CCceEEEeCCHHHHHHHhHHHhhhh
Q 018019 302 CCVYIAS---------NSKYCVRLNSIQAFMDINRDVIGEA 333 (362)
Q Consensus 302 ~~~~~~~---------~~~y~~rin~~~~Y~~~n~~~l~~~ 333 (362)
+++|.++ .+|||..|+|+.+|+++|+++++.+
T Consensus 247 v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~ 287 (420)
T 3brk_X 247 AVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVV 287 (420)
T ss_dssp EEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSS
T ss_pred EEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCC
Confidence 4666652 2579999999999999999999753
No 4
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.97 E-value=8.3e-30 Score=232.90 Aligned_cols=234 Identities=16% Similarity=0.250 Sum_probs=178.2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
.|+|||||||.|+||+|+ |..+||+|+||+|+|||+|+++++.++|+++|+|++++.+. +.+.+++.+...-...+.+
T Consensus 24 ~m~aiIlAaG~g~Rl~~l-t~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~-~~~~~~~~~~~~~~~~i~~ 101 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPI-TKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHM-GDVVSFLGSGQEFGVSFTY 101 (269)
T ss_dssp CEEEEEECCSCCGGGTTT-TSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTH-HHHHHHHTTSGGGTCEEEE
T ss_pred CcEEEEECCCCccccccc-cCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhH-HHHHHHHhhccccCceEEE
Confidence 479999999999999999 99999999999999999999999999999999999986432 4666777531100123445
Q ss_pred EEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCC
Q 018019 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG 161 (362)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (362)
+.++...|++++++.+++++..++++|++||.++..++.++++.|+++++++++++.+.. ++.
T Consensus 102 ~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-----------------~~~ 164 (269)
T 4ecm_A 102 RVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVD-----------------DPE 164 (269)
T ss_dssp EECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECS-----------------CGG
T ss_pred eeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECC-----------------CCC
Confidence 555667999999999998887678999999998889999999999988899988887543 255
Q ss_pred cceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhcCcc--cccc-hhhhh
Q 018019 162 RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDK--FQSL-KQDVL 238 (362)
Q Consensus 162 ~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~~~~--~~s~-~~d~i 238 (362)
.|+++..|+ ++ +..+.+ |+. ...+.++++|+|+|++++|..+ ++... -..+ ..|++
T Consensus 165 ~~g~v~~d~-g~-v~~~~e-----kp~-------------~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~ge~~l~d~l 223 (269)
T 4ecm_A 165 RFGVANIQN-RK-IIEIEE-----KPK-------------EPKSSYAVTGIYLYDSKVFSYI-KELKPSARGELEITDIN 223 (269)
T ss_dssp GSEEEEEET-TE-EEEEEE-----SCS-------------SCSCSEEEEEEEEECTTHHHHH-TSCCBCTTSCBCHHHHH
T ss_pred CceEEEEcC-CE-EEEEEE-----CCC-------------CCCCcEEEEEEEEECHHHHHhh-hhcCCCCCCeeeHHHHH
Confidence 789998885 55 456653 321 1235789999999999999544 42211 0111 24555
Q ss_pred hHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeeEEEEEecCCceEEEeCC
Q 018019 239 PYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNS 318 (362)
Q Consensus 239 p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~rin~ 318 (362)
+.++... ++++|.. +||+..|+|
T Consensus 224 ~~l~~~g-------------------------------------------------------~v~~~~~--~~~~~dIgt 246 (269)
T 4ecm_A 224 NWYLKRG-------------------------------------------------------VLTYNEM--SGWWTDAGT 246 (269)
T ss_dssp HHHHHTT-------------------------------------------------------CEEEEEC--CSCEEECSS
T ss_pred HHHHHcC-------------------------------------------------------CEEEEEe--CCEEEeCCC
Confidence 5554321 3466766 789999999
Q ss_pred HHHHHHHhHHHhhh
Q 018019 319 IQAFMDINRDVIGE 332 (362)
Q Consensus 319 ~~~Y~~~n~~~l~~ 332 (362)
+.+|.++|+.+++.
T Consensus 247 ~~dl~~a~~~l~~~ 260 (269)
T 4ecm_A 247 HVSLQRANALARDI 260 (269)
T ss_dssp HHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 5
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.97 E-value=1.6e-29 Score=229.36 Aligned_cols=229 Identities=18% Similarity=0.308 Sum_probs=167.6
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhc--CCcc
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV--DRLH 78 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~--~~~~ 78 (362)
|+|+|||||||.|+||+|+ |..+||+|+|++|+|||+|+++++.++|+++|+|++++.. +.+.+++.+... ....
T Consensus 1 m~~~avIlAaG~gtRl~~l-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 77 (259)
T 1tzf_A 1 MASKAVILAGGLGTRLSEE-TIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKG--YVIKEYFANYFLHMSDVT 77 (259)
T ss_dssp CCCEEEEEECSCC---------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTH--HHHHHHHHTHHHHHSCEE
T ss_pred CCcEEEEECCCCcccCCCc-cCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCH--HHHHHHHhhccccccccc
Confidence 8999999999999999999 9999999999999999999999999999999999998653 578888765310 0111
Q ss_pred -------------------eEEEEcCCCCCHHHHHHHHHHhcC-CCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEe
Q 018019 79 -------------------VEVATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMIC 138 (362)
Q Consensus 79 -------------------i~i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~ 138 (362)
+.+..++...||+++++.+++++. .+++++++||.+++.++.++++.|.+.++++|+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~ 157 (259)
T 1tzf_A 78 FHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT 157 (259)
T ss_dssp EEGGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE
T ss_pred ccccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe
Confidence 112223446899999999988883 567999999999999999999999888888877543
Q ss_pred eeccCCCcccCCCCCccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHH
Q 018019 139 SVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS 218 (362)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~ 218 (362)
. .+..|+++.+| +|+ +..+.+ |+. ....++++|+|+|+++
T Consensus 158 ~-------------------~~~~~g~v~~~-~g~-v~~~~e-----kp~--------------~~~~~~~~Giy~~~~~ 197 (259)
T 1tzf_A 158 F-------------------PPGRFGALDIQ-AGQ-VRSFQE-----KPK--------------GDGAMINGGFFVLNPS 197 (259)
T ss_dssp C-------------------CCCCSEEEEEE-TTE-EEEEEE-----SCS--------------CCSCCEECCCEEECGG
T ss_pred c-------------------CCCCccEEEEc-CCE-EEEEEe-----cCC--------------CCCceEEEEEEEeCHH
Confidence 2 14568888888 565 456653 331 1136889999999999
Q ss_pred HHHHHHhcCcccccchhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCc
Q 018019 219 VLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRR 298 (362)
Q Consensus 219 vl~~~~~~~~~~~s~~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (362)
+|..+ +.. ..++..|+++.+++++
T Consensus 198 ~l~~l-~~~--~~~~~~~~i~~~~~~~----------------------------------------------------- 221 (259)
T 1tzf_A 198 VIDLI-DND--ATTWEQEPLMTLAQQG----------------------------------------------------- 221 (259)
T ss_dssp GGGGC-CST--TCCTTTHHHHHHHHTT-----------------------------------------------------
T ss_pred HHHhh-ccc--ccccHHHHHHHHHHcC-----------------------------------------------------
Confidence 98533 321 1234467777765321
Q ss_pred eeeEEEEEecCCceEEEeCCHHHHHHHhHHHhhh
Q 018019 299 THKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (362)
Q Consensus 299 ~~~~~~~~~~~~~y~~rin~~~~Y~~~n~~~l~~ 332 (362)
++++|.. +||+..|+|+.+|.++++.++..
T Consensus 222 --~v~~~~~--~~~~~dI~t~~d~~~a~~~~~~~ 251 (259)
T 1tzf_A 222 --ELMAFEH--PGFWQPMDTLRDKVYLEGLWEKG 251 (259)
T ss_dssp --CEEEEEE--CSCEEECCSHHHHHHHHHHHHTT
T ss_pred --CEEEEEe--CcEEEeCCCHHHHHHHHHHHhcC
Confidence 3577877 67999999999999999998763
No 6
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.97 E-value=2e-29 Score=250.02 Aligned_cols=187 Identities=25% Similarity=0.300 Sum_probs=151.9
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhc-CCcceEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV-DRLHVEV 81 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~-~~~~i~i 81 (362)
+.+||||||+||||+|+ | ||||+||+|||||+|+|++|.++|+++|+|++++. .+++.+++.++.. -...+.+
T Consensus 13 ~~vvILAaG~GtRm~~~-~---pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~--~~~i~~~~~~~~~~~~~~i~~ 86 (501)
T 3st8_A 13 TAVLVLAAGPGTRMRSD-T---PKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHD--HQRIAPLVGELADTLGRTIDV 86 (501)
T ss_dssp EEEEEEECSCCGGGCCS-S---CGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTT--HHHHHHHHHHHHHHHTSCCEE
T ss_pred ceEEEECCcCcccCCCC-C---CHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCC--HHHHHHHHHHHHHhcCCcEEE
Confidence 46799999999999998 5 99999999999999999999999999999999976 4688888875211 1246788
Q ss_pred EEcCCCCCHHHHHHHHHHhcCC---CcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccC
Q 018019 82 ATVPEDVGTAGALRAIAHHLTA---KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (362)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~---~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~ 156 (362)
+.|++++|||+|++++++++.+ ++++++.||. +...++..+++.|+..++++|+++.+.+
T Consensus 87 ~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~--------------- 151 (501)
T 3st8_A 87 ALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLD--------------- 151 (501)
T ss_dssp EECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS---------------
T ss_pred EEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccC---------------
Confidence 8899999999999999998863 4689999994 4456789999999999999999988754
Q ss_pred CCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhcC
Q 018019 157 TKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQK 227 (362)
Q Consensus 157 ~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~~ 227 (362)
+|..||++..|++|++ ..+.++.+.. +. +...+++++|+|+|++++|..++...
T Consensus 152 --dp~~yG~i~~~~~g~v-~~ivEk~~~~-----~~---------~~~i~~in~Giy~f~~~~l~~~l~~l 205 (501)
T 3st8_A 152 --DPFGYGRILRTQDHEV-MAIVEQTDAT-----PS---------QREIREVNAGVYAFDIAALRSALSRL 205 (501)
T ss_dssp --CCTTSCEEEECTTCCE-EEEECGGGCC-----HH---------HHHCCEEEEEEEEEEHHHHHHHHTTC
T ss_pred --CchhccccccccceeE-EeeccccCCC-----hh---------hccceeeeceeeeecchhHHHhhhhh
Confidence 3778999999999976 5666422110 10 12357899999999999998887643
No 7
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.96 E-value=3e-28 Score=226.21 Aligned_cols=234 Identities=12% Similarity=0.225 Sum_probs=171.9
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhh---------
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY--------- 73 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~--------- 73 (362)
|+|||||||.|+||+|+ |..+||+|+||+|+|||+|+++++.++|+++|+|++++. .+.+.+++...+
T Consensus 9 ~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~~~ 85 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPA-TKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSS--KNSIENHFDTSFELEAMLEKR 85 (302)
T ss_dssp CEEEEECCSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG--GHHHHHHHSCCHHHHHHHC--
T ss_pred cEEEEECCcCcccCCcc-ccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCC--HHHHHHHHhcchhhhhhhhhc
Confidence 78999999999999999 999999999999999999999999999999999999865 357888775311
Q ss_pred -------------cCCcceEEEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCcccC-----C---ChHHHHHHHHhcCCe
Q 018019 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD-----V---PPGAVTAAHRRHDAV 132 (362)
Q Consensus 74 -------------~~~~~i~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~-----~---~l~~~l~~h~~~~a~ 132 (362)
.....+.++.++...|++++++.+++++.+++|+|++||.+++ . ++..+++.|++.++
T Consensus 86 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~- 164 (302)
T 2e3d_A 86 VKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH- 164 (302)
T ss_dssp --CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-
T ss_pred cchhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-
Confidence 0112344556667899999999999888667899999997666 3 79999999988777
Q ss_pred EEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEc----CCCc--EEEEeecCcccccccccchHHHhhcCceeeecC
Q 018019 133 VTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTKQ--FLLHIATGAELEKDTRIRKSILRAVGQMDIRAD 206 (362)
Q Consensus 133 ~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d----~~~~--~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~ 206 (362)
+|+++.... .+..|+++..+ ++|. .+..+.+++..+ ...+.
T Consensus 165 ~~i~~~~~~-----------------~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~----------------~~~~~ 211 (302)
T 2e3d_A 165 SQIMVEPVA-----------------DVTAYGVVDCKGVELAPGESVPMVGVVEKPKAD----------------VAPSN 211 (302)
T ss_dssp EEEEEEECS-----------------CGGGSEEEECTTCCCCTTCEEEECEEEESCCTT----------------TCSCS
T ss_pred cEEEEEEcc-----------------CCCCccEEEecccccCCCCceeEEEEEECCCCC----------------ccccc
Confidence 666655431 24578988764 3441 345555322110 12347
Q ss_pred ceeceEEeeCHHHHHHHHhcCc-cc-ccc-hhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCccc
Q 018019 207 LMDAHMYAFNRSVLQEVLDQKD-KF-QSL-KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFH 283 (362)
Q Consensus 207 l~~~giYi~s~~vl~~~~~~~~-~~-~s~-~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (362)
++++|+|+|++++|..+ +... +. ..+ ..|+++.+++.
T Consensus 212 ~~~~Giyi~~~~~l~~l-~~~~~~~~~~~~l~d~i~~l~~~--------------------------------------- 251 (302)
T 2e3d_A 212 LAIVGRYVLSADIWPLL-AKTPPGAGDEIQLTDAIDMLIEK--------------------------------------- 251 (302)
T ss_dssp EEEEEEEEECTTHHHHH-TCCCC----CCCHHHHHHHHHHH---------------------------------------
T ss_pred eEEEEEEEECHHHHHHH-HhhCCCCCCceehHHHHHHHHHh---------------------------------------
Confidence 88999999999988655 3321 10 011 13555554422
Q ss_pred ccccCCCCCCCCCCceeeEEEEEecCCceEEEeCCHHHHHHHhHHHhh
Q 018019 284 ELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIG 331 (362)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~rin~~~~Y~~~n~~~l~ 331 (362)
-++++|.+ +||+..|+|+.+|+++|++++-
T Consensus 252 ----------------~~v~~~~~--~~~~~DIgt~~d~~~a~~~~~~ 281 (302)
T 2e3d_A 252 ----------------ETVEAYHM--KGKSHDCGNKLGYMQAFVEYGI 281 (302)
T ss_dssp ----------------SCEEEEEC--CSCEEECSSHHHHHHHHHHHHH
T ss_pred ----------------CCEEEEEe--CCeEEcCCCHHHHHHHHHHHHh
Confidence 14577877 6799999999999999988774
No 8
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.96 E-value=8.5e-29 Score=229.40 Aligned_cols=239 Identities=16% Similarity=0.178 Sum_probs=160.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhh--------
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~-------- 73 (362)
.|+|||||||.|+||+|+ |..+||+|+||+|+|||+|+++++.++|+++|+|++++.. +.+.+++...+
T Consensus 14 ~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~l~~~l~~ 90 (297)
T 2ux8_A 14 LRKAVFPVAGLGTRFLPA-TKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGK--SALEDHFDIAYELEATMAA 90 (297)
T ss_dssp CCEEEEEECCCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTC--HHHHHHTSCCHHHHHHHHT
T ss_pred ccEEEEECCCCccccCcc-ccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCH--HHHHHHHhhhhhhhhhhhh
Confidence 578999999999999999 9999999999999999999999999999999999998653 47777765311
Q ss_pred ------------cCCcceEEEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCcccC---CChHHHHHHHHhcCCeEEEEEe
Q 018019 74 ------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD---VPPGAVTAAHRRHDAVVTAMIC 138 (362)
Q Consensus 74 ------------~~~~~i~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~---~~l~~~l~~h~~~~a~~t~l~~ 138 (362)
.....+.++.++...|++++++.+++++..++|+|++||.+++ .++..+++.|++.++ .++.+.
T Consensus 91 ~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~~ 169 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICAE 169 (297)
T ss_dssp TTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEEC
T ss_pred ccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEEE
Confidence 0113466666667799999999999888667899999997665 679999999988776 555554
Q ss_pred eeccCCCcccCCCCCccCCCCCCcceEEEEcC--CC-cEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEee
Q 018019 139 SVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAF 215 (362)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~--~~-~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~ 215 (362)
..+.. .+..|+++..++ ++ ..+..+.+ |+.. . ...++++++|+|+|
T Consensus 170 ~~~~~---------------~~~~yg~v~~~~~~~~~~~v~~~~e-----kp~~-~----------~~~~~~~~~Giyi~ 218 (297)
T 2ux8_A 170 EVPDD---------------QTHRYGIITPGTQDGVLTEVKGLVE-----KPAP-G----------TAPSNLSVIGRYIL 218 (297)
T ss_dssp --------------------------CCCCCCBCSSEEEC------------------------------CCCEEEEEEE
T ss_pred ecCcc---------------cCCCCCeEEecccCCCceeEEEEEE-----CCCC-C----------CCCccEEEEEEEEE
Confidence 43211 245677776653 33 13344542 3210 0 12347899999999
Q ss_pred CHHHHHHHHhcCcccc-cc-hhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCC
Q 018019 216 NRSVLQEVLDQKDKFQ-SL-KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGS 293 (362)
Q Consensus 216 s~~vl~~~~~~~~~~~-s~-~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (362)
++++|..+.+...+.. .+ -.|+++.+++
T Consensus 219 ~~~~l~~l~~~~~~~~~~~~l~d~i~~l~~-------------------------------------------------- 248 (297)
T 2ux8_A 219 QPEVMRILENQGKGAGGEIQLTDAMQRMIG-------------------------------------------------- 248 (297)
T ss_dssp CTHHHHHHHHTC--------CCTTGGGGTT--------------------------------------------------
T ss_pred CHHHHHHHHhhCCCCCCeeEHHHHHHHHHh--------------------------------------------------
Confidence 9998865532111100 00 0122222210
Q ss_pred CCCCceeeEEEEEecCCceEEEeCCHHHHHHHhHHHhhh
Q 018019 294 APVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (362)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~y~~rin~~~~Y~~~n~~~l~~ 332 (362)
.-++++|.+ +|+|..|+|+.+|.++|++++..
T Consensus 249 -----~~~v~~~~~--~~~w~dIgt~~dl~~a~~~~~~~ 280 (297)
T 2ux8_A 249 -----DQPFHGVTF--QGTRYDCGDKAGFIQANLAVALS 280 (297)
T ss_dssp -----TSCEEEEEC--SSEEEETTSHHHHHHHHHHHHHH
T ss_pred -----cCCEEEEEe--cceEEeCCCHHHHHHHHHHHHhc
Confidence 015688887 67999999999999999988753
No 9
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.96 E-value=3.7e-28 Score=227.66 Aligned_cols=239 Identities=17% Similarity=0.205 Sum_probs=173.0
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhh--------
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~-------- 73 (362)
-|+|||||||.|+||+|+ |..+||+|+||+|+|||+|+++++..+|+++|+|++++.. +.+.+++...+
T Consensus 12 ~~~aVIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~--~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 12 VKTVVVPAAGLGTRFLPA-TKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNK--AGVLAHFERSSELEETLME 88 (323)
T ss_dssp CCEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTC--HHHHHTTSCCHHHHHHHHH
T ss_pred ceEEEEECCCCccccCcc-ccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcH--HHHHHHHhccchhhhhhhc
Confidence 378999999999999999 9999999999999999999999999999999999998653 46766654210
Q ss_pred -------------cCCcceEEEEcCCCCCHHHHHHHHHHhcCCCc--EEEEeCCcccC--CChHHHHHHHHhcCCeEEEE
Q 018019 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKD--VLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAM 136 (362)
Q Consensus 74 -------------~~~~~i~i~~~~~~~gt~~al~~~~~~i~~~~--~lv~~~D~i~~--~~l~~~l~~h~~~~a~~t~l 136 (362)
.....+.++.++...|++++++.+++++..++ |+|++||.+++ .++..+++.|++.++ .++.
T Consensus 89 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~ 167 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLC 167 (323)
T ss_dssp TTCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEEE
T ss_pred cchhhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEEE
Confidence 00123455666667999999999988886555 99999997665 679999999987766 4555
Q ss_pred EeeeccCCCcccCCCCCccCCCCCCcceEEEEc----CCC-cEEEEeecCcccccccccchHHHhhcCceeeecCceece
Q 018019 137 ICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 211 (362)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d----~~~-~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~g 211 (362)
+...+.. .+..|+++.++ +++ ..+..+.+++..+ ...+++.++|
T Consensus 168 ~~~~~~~---------------~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~----------------~~~~~~~~~G 216 (323)
T 2pa4_A 168 AVEVSEA---------------DVSKYGIFEIEADTKDSDVKKVKGMVEKPAIE----------------DAPSRLAATG 216 (323)
T ss_dssp EEECCGG---------------GGGGSEEEEEEECCSSTTEEEEEEEEESCCTT----------------TCSCSEEEEE
T ss_pred EEEeccc---------------ccCCccEEEeCCcccCCCceeEEEEEECCCCc----------------cccccEEEEE
Confidence 5443210 14578988876 443 2455666432111 1234788999
Q ss_pred EEeeCHHHHHHHHhcCccc-ccch-hhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCC
Q 018019 212 MYAFNRSVLQEVLDQKDKF-QSLK-QDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALG 289 (362)
Q Consensus 212 iYi~s~~vl~~~~~~~~~~-~s~~-~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (362)
+|+|++++|..+.....+. ..+. .++++.+++++
T Consensus 217 iY~~~~~~~~~l~~~~~~~~ge~~l~d~i~~l~~~g-------------------------------------------- 252 (323)
T 2pa4_A 217 RYLLDRKIFDALRRITPGAGGELQLTDAIDLLIDEG-------------------------------------------- 252 (323)
T ss_dssp EEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHHHTT--------------------------------------------
T ss_pred EEEECHHHHHHHHhhCCCCCCeEeHHHHHHHHHHcC--------------------------------------------
Confidence 9999999886653322111 1111 46666654321
Q ss_pred CCCCCCCCceeeEEEEEecCCceEEEeCCHHHHHHHhHHHhh
Q 018019 290 PNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIG 331 (362)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~y~~rin~~~~Y~~~n~~~l~ 331 (362)
.++++|.+ +|++..|+|+.+|.++|++++.
T Consensus 253 ----------~~v~~~~~--~g~w~DIgt~~dl~~a~~~~~~ 282 (323)
T 2pa4_A 253 ----------HPVHIVIH--QGKRHDLGNPGGYIPACVDFGL 282 (323)
T ss_dssp ----------CCEEEEEC--CSEEEECSSHHHHHHHHHHHHH
T ss_pred ----------CCEEEEEe--CCeEEeCCCHHHHHHHHHHHhh
Confidence 35678887 6799999999999999998874
No 10
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.96 E-value=8.9e-28 Score=223.05 Aligned_cols=253 Identities=14% Similarity=0.114 Sum_probs=177.5
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeee--CCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcc
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPV--ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLH 78 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv--~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~ 78 (362)
|++.+||||||.|+||+| ||+|+|+ +|+|||+|+++++.++|+++|+|++++.. .+.+.+++.+......+
T Consensus 4 m~~~~vIlAaG~g~R~~~------~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~-~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 4 MKPTLFVLAAGMGSRYGS------LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSF-EKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCEEEEECTTCBCTTSS------BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGG-HHHHHHHTHHHHTTTSC
T ss_pred CceEEEEECCCCcccCCC------CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchH-HHHHHHHHHHHhccCCc
Confidence 688999999999999965 5999999 59999999999999999999999998653 25788888754322345
Q ss_pred eEEEEcC---------------CCCCHHHHHHHHHHhcCCCcEEEEeCCcccCCC-hHHHHHHHHh---cCCeEEEEEee
Q 018019 79 VEVATVP---------------EDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR---HDAVVTAMICS 139 (362)
Q Consensus 79 i~i~~~~---------------~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-l~~~l~~h~~---~~a~~t~l~~~ 139 (362)
+.++.++ .+.||+++++.+++++ +++|+|++||.+++.+ +..+++.|.+ .++++|+++..
T Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-~~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 155 (303)
T 3pnn_A 77 VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-REPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMVGYR 155 (303)
T ss_dssp EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-CSCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEEEE
T ss_pred EEEEecccccccccccccccccccCCcHHHHHHHHHhc-CCCEEEEECCeecCHHHHHHHHHHHHHhccccCceEEEEEE
Confidence 6677665 5699999999999988 6789999999988775 8999999976 57889988876
Q ss_pred eccCCC-cccCCCCCccCCCCCCcceEEEEcCCCcEEEEeecCcccccc---cccchHHHhhcCc-e-eeecCceeceEE
Q 018019 140 VPVSGL-SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKD---TRIRKSILRAVGQ-M-DIRADLMDAHMY 213 (362)
Q Consensus 140 ~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~---~~i~~~~l~~~~~-~-~~~~~l~~~giY 213 (362)
.. +| ..++ ...+|++.+|++|++ ..+.++++.... ..... ..+. . ...++++++|+|
T Consensus 156 ~~--~~~~~~g----------~~~~G~v~~d~~g~v-~~i~Ekp~~~~~~~~~~~~~----~~g~~~~~~~~~~i~~GiY 218 (303)
T 3pnn_A 156 VG--NTLSESG----------GVSRGVCQVDEKHLL-TGVVERTGIERTDGTISFRD----ETGKICTLAEDAPVSMNMW 218 (303)
T ss_dssp GG--GSCBTTB----------CEEEEEEEECTTSBE-EEEEEEEEEEEETTEEEEEC----TTSCEEEECTTCEEEEEEE
T ss_pred CC--CccCccC----------ceeeeeEeeCCCCcE-EEEEECCCCccccccccccc----cccccccCCCCCEEEEEEE
Confidence 53 22 1110 123478889988865 577643321100 00000 0000 0 013579999999
Q ss_pred eeCHHHHHHHHh--------cCcc--cccchhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCccc
Q 018019 214 AFNRSVLQEVLD--------QKDK--FQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFH 283 (362)
Q Consensus 214 i~s~~vl~~~~~--------~~~~--~~s~~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (362)
+|++++|..+.+ .... -.....|+|+.+++.+
T Consensus 219 ~f~~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g-------------------------------------- 260 (303)
T 3pnn_A 219 GFTPDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSG-------------------------------------- 260 (303)
T ss_dssp EECTHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHT--------------------------------------
T ss_pred EECHHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcC--------------------------------------
Confidence 999999976632 1110 0011234444444321
Q ss_pred ccccCCCCCCCCCCceeeEEEEEecCCceEEEeCCHHHHHHHhHHHhhhh
Q 018019 284 ELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA 333 (362)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~rin~~~~Y~~~n~~~l~~~ 333 (362)
..++++|.+ +||+..|+|...|.++++.+-..+
T Consensus 261 ---------------~~~v~~~~~--~g~w~dIgt~~dl~~a~~~l~~~~ 293 (303)
T 3pnn_A 261 ---------------RASVEVLDT--TARWFGVTYSDDRPGVVAKLRELT 293 (303)
T ss_dssp ---------------SCEEEEEEC--SCCCBCCSSGGGHHHHHHHHHHHH
T ss_pred ---------------CCcEEEEEe--CCceECCCCHHHHHHHHHHHHHHH
Confidence 126788888 789999999999999998876643
No 11
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.95 E-value=6.9e-27 Score=215.95 Aligned_cols=185 Identities=20% Similarity=0.333 Sum_probs=143.5
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|+|+|||||||.||||+|+ |..+||+|+||+|||||+|+++.|..+|+++|+|++...+ .+.+.+++.+...-...+.
T Consensus 1 M~~~aIILAgG~gtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~ 78 (293)
T 1fxo_A 1 MKRKGIILAGGSGTRLHPA-TLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQD-TPRFQQLLGDGSNWGLDLQ 78 (293)
T ss_dssp -CEEEEEECCCCCTTTTTH-HHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEE
T ss_pred CCceEEEECCCCCCcCccc-cCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEecccc-HHHHHHHHhcccccCceEE
Confidence 8899999999999999999 8999999999999999999999999999999998875432 3567777764100012344
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCc-ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCC
Q 018019 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL-VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~-i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (362)
++.++.+.|++++++.+.+++..++++++.||. +.+.++..+++.|.+.+.+++++..+.. +
T Consensus 79 ~~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------d 141 (293)
T 1fxo_A 79 YAVQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVL-----------------D 141 (293)
T ss_dssp EEECSSCCCGGGHHHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECS-----------------C
T ss_pred EeeCCCCCCHHHHHHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECC-----------------C
Confidence 555667799999999999888767888899995 4467899999999877777777665432 2
Q ss_pred CCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHH
Q 018019 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (362)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~ 223 (362)
+..|+++.+|++|++ ..+.+ |+. ...+++.++|+|+|+++++..+
T Consensus 142 p~~~g~v~~d~~g~v-~~~~e-----kp~-------------~~~s~~~~~Giy~~~~~~l~~~ 186 (293)
T 1fxo_A 142 PERYGVVEFDQGGKA-ISLEE-----KPL-------------EPKSNYAVTGLYFYDQQVVDIA 186 (293)
T ss_dssp GGGSEEEEECTTSCE-EEEEE-----SCS-------------SCSSSEEEEEEEEECTTHHHHH
T ss_pred cccCcEEEECCCCcE-EEEEE-----CCC-------------CCCCCeEEEEEEEEcHHHHHHH
Confidence 557899999988875 45653 321 1234789999999999998655
No 12
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.95 E-value=5.7e-26 Score=209.88 Aligned_cols=184 Identities=20% Similarity=0.326 Sum_probs=142.8
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
.|+|||||||.||||+|+ |..+||+|+||+|||||+|+++.|..+|+++|+|+++..+ .+.+.+++.+...-...+.+
T Consensus 3 ~m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~-~~~i~~~l~~g~~~g~~i~~ 80 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPI-TRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRD-LPLYRDLLGDGSQFGVRFSY 80 (295)
T ss_dssp SCEEEEECCCCCSTTTTT-TTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTSEEEE
T ss_pred ceEEEEECCCCCCccccc-cCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccch-HHHHHHHhhhccccCceEEE
Confidence 478999999999999999 9999999999999999999999999999999999886332 35677777641000123445
Q ss_pred EEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCcc-cCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCC
Q 018019 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLV-SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKP 160 (362)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i-~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~ 160 (362)
+.++.+.|++++++.+.+++.+++++++.||.+ .+.++.++++.|.+.+..++++..+.. ++
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------dp 143 (295)
T 1lvw_A 81 RVQEEPRGIADAFIVGKDFIGDSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVR-----------------DP 143 (295)
T ss_dssp EECSSCCCGGGHHHHTHHHHTTSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECS-----------------CC
T ss_pred eeCCCCCChHHHHHHHHHHhCCCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECC-----------------Cc
Confidence 556677899999999998887677888889964 467999999999876677777665432 25
Q ss_pred CcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHH
Q 018019 161 GRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (362)
Q Consensus 161 ~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~ 223 (362)
..|+++.+|+++++ ..+.+ |+. ...++++++|+|+|+++++..+
T Consensus 144 ~~~g~v~~d~~g~v-~~~~e-----kp~-------------~~~s~~~~~Giy~f~~~~l~~~ 187 (295)
T 1lvw_A 144 RPFGVVEFDSEGRV-ISIEE-----KPS-------------RPKSNYVVPGLYFYDNQVVEIA 187 (295)
T ss_dssp TTSEEEEECTTSBE-EEEEE-----SCS-------------SCSCSEECCSEEEECTTHHHHH
T ss_pred ccCCEEEECCCCcE-EEEEE-----CCC-------------CCCCCEEEEEeEEEcHHHHHHH
Confidence 57899999988875 45653 321 1234688999999999998655
No 13
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.95 E-value=1.9e-26 Score=226.62 Aligned_cols=229 Identities=20% Similarity=0.251 Sum_probs=170.1
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~ 82 (362)
-+|||||||.|+||+ ..+||+|+|++|+|||+|++++|.++|+++|+|++++. .+.+.+++.+ ++.++
T Consensus 12 ~~~vIlAaG~g~R~~----~~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~--~~~i~~~~~~------~i~~v 79 (468)
T 1hm9_A 12 NFAIILAAGKGTRMK----SDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHK--AELVEEVLAG------QTEFV 79 (468)
T ss_dssp EEEEEECCCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTT--HHHHHHSSSS------SSEEE
T ss_pred CcEEEEcCCCCccCC----CCCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCC--HHHHHHHhCC------CcEEE
Confidence 369999999999994 47899999999999999999999999999999999865 2355544431 56677
Q ss_pred EcCCCCCHHHHHHHHHHhcC--CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCC
Q 018019 83 TVPEDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTK 158 (362)
Q Consensus 83 ~~~~~~gt~~al~~~~~~i~--~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~ 158 (362)
.++...|++++++.+++++. .+++++++||. +.+.++.++++.|++.++++++++.+..
T Consensus 80 ~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~----------------- 142 (468)
T 1hm9_A 80 TQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD----------------- 142 (468)
T ss_dssp ECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS-----------------
T ss_pred eCCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC-----------------
Confidence 76777899999999988885 46799999996 7778899999999988888888776542
Q ss_pred CCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhcCccc----ccch
Q 018019 159 KPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF----QSLK 234 (362)
Q Consensus 159 ~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~~~~~----~s~~ 234 (362)
++..|+++.+|+++++ ..+.+++..... ...+++.++|+|+|+++.|..++++.... ....
T Consensus 143 ~~~~~g~v~~d~~g~v-~~~~ek~~~~~~--------------~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~ 207 (468)
T 1hm9_A 143 NPFGYGRIVRNDNAEV-LRIVEQKDATDF--------------EKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYI 207 (468)
T ss_dssp CCTTSCEEEECTTCCE-EEEECTTTCCTT--------------GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCT
T ss_pred CCCceeEEEECCCCCE-EEEEECCCCChH--------------HhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEH
Confidence 2556888888887765 556532210000 12347899999999999776665532111 1123
Q ss_pred hhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeeEEEEEecCCceEE
Q 018019 235 QDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCV 314 (362)
Q Consensus 235 ~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 314 (362)
.|+++.+++.+ .++++|++ +||+.
T Consensus 208 ~d~~~~l~~~g------------------------------------------------------~~v~~~~~--~g~~~ 231 (468)
T 1hm9_A 208 TDVIGIFRETG------------------------------------------------------EKVGAYTL--KDFDE 231 (468)
T ss_dssp THHHHHHHHHT------------------------------------------------------CCEEEEEC--SSGGG
T ss_pred HHHHHHHHHCC------------------------------------------------------CEEEEEEc--CChHH
Confidence 57777766442 35678887 66775
Q ss_pred E--eCCHHHHHHHhHHHhh
Q 018019 315 R--LNSIQAFMDINRDVIG 331 (362)
Q Consensus 315 r--in~~~~Y~~~n~~~l~ 331 (362)
. |++...|.+++..+..
T Consensus 232 ~i~i~t~~dl~~a~~~~~~ 250 (468)
T 1hm9_A 232 SLGVNDRVALATAESVMRR 250 (468)
T ss_dssp GCCCCSHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHH
Confidence 4 7799999999876653
No 14
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.95 E-value=1.8e-26 Score=208.98 Aligned_cols=222 Identities=12% Similarity=0.111 Sum_probs=157.8
Q ss_pred EEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHh-CCCCeEEEEccCcch-HHHHHHHHHhhhcCCcceEEE
Q 018019 5 VVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADA-ALRVGGWISAAYVDRLHVEVA 82 (362)
Q Consensus 5 avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~-~gi~~v~vv~~~~~~-~~~i~~~~~~~~~~~~~i~i~ 82 (362)
+||||||.||||+|+ |..+||+|+||+|||||+|+|+++.+ +|+++|+|++++... .+.+.+++..+... ....++
T Consensus 2 ~iIlAaG~GtRl~pl-t~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (255)
T 4evw_A 2 IVIPMAGMSSRFFKA-GYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDTAVFVREKATQLGIK-QFYIAE 79 (255)
T ss_dssp EEEECCSCCHHHHHT-TCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTTHHHHHHHHHHHHTCS-SEEEEE
T ss_pred EEEEcCCCCcccccC-CCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhhhHHHHHHHHHHcCCC-CceEEE
Confidence 899999999999999 99999999999999999999999999 899999999986531 12344444332111 112345
Q ss_pred EcCCCCCHHHHHHHHHHhc------CCCcEEEEeCCccc-CCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCcc
Q 018019 83 TVPEDVGTAGALRAIAHHL------TAKDVLVVSGDLVS-DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKD 155 (362)
Q Consensus 83 ~~~~~~gt~~al~~~~~~i------~~~~~lv~~~D~i~-~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~ 155 (362)
.++...||+++++.+.+.+ .+++|+|++||.++ +.++.++ ..+++.++++...+
T Consensus 80 ~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~-------------- 140 (255)
T 4evw_A 80 LHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGG-------------- 140 (255)
T ss_dssp ESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECC--------------
T ss_pred eCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecC--------------
Confidence 5677899999999999988 25679999999877 5666543 24667788877643
Q ss_pred CCCCCCcceEEEEcCCC--cEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHH-HHH----HHHhcCc
Q 018019 156 KTKKPGRYNIIGMDPTK--QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS-VLQ----EVLDQKD 228 (362)
Q Consensus 156 ~~~~~~~~~~v~~d~~~--~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~-vl~----~~~~~~~ 228 (362)
.+ .||++..|++| ++ ..+.+ |. ..++++++|+|+|++. .|. .++++..
T Consensus 141 ---~p-~yG~v~~d~~g~~~V-~~i~E-----K~---------------~~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~ 195 (255)
T 4evw_A 141 ---GD-NWSFAKPEHAGSTKV-IQTAE-----KN---------------PISDLCSTGLYHFNRKEDYLEAYREYVARPS 195 (255)
T ss_dssp ---SS-CSCEEEESSTTCCBE-EEEES-----SS---------------CSSSEEEEEEEEESCHHHHHHHHHHHHTSCG
T ss_pred ---CC-ceeEEEECCCCCeEE-EEEEe-----cc---------------CccCcEEEeEEEECcHHHHHHHHHHHHhccc
Confidence 13 78999999877 65 56663 31 1357899999999985 232 2222211
Q ss_pred c----cccchhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeeEEE
Q 018019 229 K----FQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCV 304 (362)
Q Consensus 229 ~----~~s~~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (362)
. -...-.|+++.+++++ .++++
T Consensus 196 ~~~~~gE~~ltd~i~~li~~g------------------------------------------------------~~v~~ 221 (255)
T 4evw_A 196 QEWERGELYIAPLYNELIQKG------------------------------------------------------LNIHY 221 (255)
T ss_dssp GGCSCSCCCSTTHHHHHHHTT------------------------------------------------------CCEEE
T ss_pred ccccCCeEehHHHHHHHHHCC------------------------------------------------------CEEEE
Confidence 0 0112246677766442 35677
Q ss_pred EEecCCceEEEeCCHHHHHHHhH
Q 018019 305 YIASNSKYCVRLNSIQAFMDINR 327 (362)
Q Consensus 305 ~~~~~~~y~~rin~~~~Y~~~n~ 327 (362)
|..+ .|+|..|+|+..|.++..
T Consensus 222 ~~~~-~~~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 222 HLIA-RHEVIFCGVPDEYTDFLR 243 (255)
T ss_dssp EECC-GGGCEECCSHHHHHHHHH
T ss_pred EEec-cccEEECCCHHHHHHHHh
Confidence 7763 389999999999988844
No 15
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.94 E-value=8.7e-27 Score=216.95 Aligned_cols=192 Identities=16% Similarity=0.197 Sum_probs=129.6
Q ss_pred CCceEEEEeCCCCCCCCCCCCC-CCCeeeeee-CCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCc-
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSK-EVPKALLPV-ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRL- 77 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~-~~pK~llpv-~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~- 77 (362)
|+|+|||||||.|+||+|| |. .+||+|+|| +|+|||+|+++++.++ +++|+|++++.. .+.+.+++.+.+ ..
T Consensus 3 ~~~~avIlAgG~gtRl~pl-t~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~-~~~i~~~~~~~~--~~~ 77 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPL-SRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKH-YFLALEEIKNEI--KNK 77 (308)
T ss_dssp CCEEEEEECC--------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGG-HHHHHHHTTTTC--SSC
T ss_pred CccEEEEEcCCCCccCCcc-CCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhH-HHHHHHHHHHhh--CCC
Confidence 5689999999999999999 75 799999999 5999999999999999 999999998643 236667765411 12
Q ss_pred ceEEEEcCCCCCHHHHHHHHHHhcCCC-cEEEEeCCccc-CCC-hHHHHHH---HHhcCCeEEEEEeeeccCCCcccCCC
Q 018019 78 HVEVATVPEDVGTAGALRAIAHHLTAK-DVLVVSGDLVS-DVP-PGAVTAA---HRRHDAVVTAMICSVPVSGLSEAGSS 151 (362)
Q Consensus 78 ~i~i~~~~~~~gt~~al~~~~~~i~~~-~~lv~~~D~i~-~~~-l~~~l~~---h~~~~a~~t~l~~~~~~~~~~~~~~~ 151 (362)
.+.++.++...||+++++.+...+..+ .++|++||.++ +.+ +.++++. |.+.++.+|+.+.+..
T Consensus 78 ~~~~i~~~~~~gt~~al~~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~---------- 147 (308)
T 2qh5_A 78 SVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDK---------- 147 (308)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSS----------
T ss_pred ccEEEeCCCCCChHHHHHHHHHHhCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCC----------
Confidence 345666677899999999999888534 49999999876 555 8899887 6677788888765432
Q ss_pred CCccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHh
Q 018019 152 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 152 ~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
.+..|+++.+|+++++ ..+.++++... ....+. ..+.++++|+|+|++++|...++
T Consensus 148 -------~~~~~g~i~~d~~~~V-~~~~Ekp~~~~----~~~~~~------~g~~~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 148 -------PNTEFGYIESPNGLDV-KRFIEKPSLDK----AIEFQK------SGGFYFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp -------CCTTSEEEECSSSSBC-SEEEESCCHHH----HHHHHH------HCCEEEEEEEEEEEHHHHHHHHH
T ss_pred -------CCCCceEEEECCCCEE-EEEEECCChHH----HHHHhh------cCCeEEEeEEEEEEHHHHHHHHH
Confidence 2457899988766665 45653221110 011110 12368999999999998744443
No 16
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.94 E-value=4.5e-26 Score=210.62 Aligned_cols=183 Identities=20% Similarity=0.318 Sum_probs=141.3
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~ 82 (362)
|+|||||||.||||+|+ |..+||+|+||+|+|||+|+++.|..+|+++|+|+++..+ .+.+.+++.+...-...+.++
T Consensus 4 m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~~~ 81 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPI-TRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPED-KGYFQRLLGDGSEFGIQLEYA 81 (296)
T ss_dssp CEEEEECCCCCGGGHHH-HTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEEEE
T ss_pred cEEEEECCCCCCcCCcc-cCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhH-HHHHHHHHhcccccCceEEEe
Confidence 78999999999999999 9999999999999999999999999999999999886332 356777776411001234455
Q ss_pred EcCCCCCHHHHHHHHHHhcCCCcEEEEeCCc-ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCC
Q 018019 83 TVPEDVGTAGALRAIAHHLTAKDVLVVSGDL-VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG 161 (362)
Q Consensus 83 ~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~-i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (362)
.++.+.|++++++.+.+++.+++++++.||. +.+.++..+++.|.+.+..++++..+.. ++.
T Consensus 82 ~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------dp~ 144 (296)
T 1mc3_A 82 EQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVM-----------------DPE 144 (296)
T ss_dssp ECSSCCCSTHHHHHTHHHHTTSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECS-----------------CCS
T ss_pred ccCCCCCHHHHHHHHHHHhCCCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECC-----------------Ccc
Confidence 5667799999999999888667788888995 4467899999999776677777655432 255
Q ss_pred cceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHH
Q 018019 162 RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (362)
Q Consensus 162 ~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~ 223 (362)
.|+++.+|++|++ ..+.+ |+. ...++++++|+|+|+++++..+
T Consensus 145 ~yg~v~~d~~g~v-~~~~e-----kp~-------------~~~s~~~~~Giy~~~~~~l~~~ 187 (296)
T 1mc3_A 145 RFGVVEFDDNFRA-ISLEE-----KPK-------------QPKSNWAVTGLYFYDSKVVEYA 187 (296)
T ss_dssp SSBBCEEETTEEE-EECCB-----SCS-------------SCSCSEEEEEEEECCTHHHHHH
T ss_pred cCCEEEECCCCcE-EEEEE-----CCC-------------CCCCCEEEEEEEEEcHHHHHHH
Confidence 7899999887764 56653 321 1234789999999999998654
No 17
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.94 E-value=4.6e-26 Score=219.60 Aligned_cols=219 Identities=20% Similarity=0.369 Sum_probs=159.9
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~ 82 (362)
|+|||||||.|+||+|| |.++||+|+|++|+|||+|++++|.++|+++|+|++++. +.+++.+.. .++.++
T Consensus 1 m~aiIlA~G~g~R~~pl-t~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~-----i~~~~~~~~---~~i~~~ 71 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPI-THTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK-----NKEYFEKKL---KEISIV 71 (401)
T ss_dssp CEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG-----GHHHHHHHC---TTCEEE
T ss_pred CeEEEEcCcCccccCcc-cCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH-----HHHHhhccC---CcEEEE
Confidence 57999999999999999 999999999999999999999999999999999999843 455555421 146676
Q ss_pred EcCC-CCCHHHHHHHHHHhcCCCcEEEEeCCcccC--CChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCC
Q 018019 83 TVPE-DVGTAGALRAIAHHLTAKDVLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (362)
Q Consensus 83 ~~~~-~~gt~~al~~~~~~i~~~~~lv~~~D~i~~--~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (362)
..+. ..|++++++.+.+ .++++++.||.++. .++.++++ .+++++++.+.. +
T Consensus 72 ~~~~~~~g~~~~l~~~~~---~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~-----------------~ 126 (401)
T 2ggo_A 72 TQKDDIKGTGAAILSAKF---NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS-----------------N 126 (401)
T ss_dssp ECCTTCCBSTTTGGGCCC---SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS-----------------C
T ss_pred eCCCCCCChHHHHHHhcc---CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC-----------------C
Confidence 6665 6889888887654 47899999997654 55666665 356677665532 1
Q ss_pred CCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhcCc----ccccchh
Q 018019 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKD----KFQSLKQ 235 (362)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~~~----~~~s~~~ 235 (362)
+..|+++..++++++ ..+.+ |+. ...+++.++|+|+|++++|..+ +... +-.++ .
T Consensus 127 ~~~~~~v~~~~~g~v-~~~~e-----k~~-------------~~~~~~~~~Giy~~~~~~~~~l-~~~~~~~~~~~~~-~ 185 (401)
T 2ggo_A 127 PKDYGVLVLDNQNNL-SKIIE-----KPE-------------IPPSNLINAGIYKLNSDIFTYL-DKISISERGELEL-T 185 (401)
T ss_dssp CSSSCEEEECTTSSE-EEEEC-----SCS-------------SCSCSEEEEEEEEEETHHHHHH-HHSCCCSSSCBCH-H
T ss_pred CcceeEEEECCCCeE-EEEEE-----CCC-------------CCCCcEEEEEEEEEcHHHHHHh-hhcCcCCCCceEH-H
Confidence 446788888877765 45542 321 1235789999999999999765 3221 11122 3
Q ss_pred hhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeeEEEEEecCCceEEE
Q 018019 236 DVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVR 315 (362)
Q Consensus 236 d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~r 315 (362)
|+++.+ ..+ .+++++.. ++++..
T Consensus 186 ~~~~~~-~~g------------------------------------------------------~~v~~~~~--~~~~~d 208 (401)
T 2ggo_A 186 DAINLM-AKD------------------------------------------------------HRVKVIEY--EGYWMD 208 (401)
T ss_dssp HHHHHH-HHH------------------------------------------------------SCEEEEEC--CSCEEE
T ss_pred HHHHHH-HCC------------------------------------------------------CcEEEEEe--cceEEc
Confidence 555554 321 24566666 569999
Q ss_pred eCCHHHHHHHhHHHhhhh
Q 018019 316 LNSIQAFMDINRDVIGEA 333 (362)
Q Consensus 316 in~~~~Y~~~n~~~l~~~ 333 (362)
|+|+..|.++++.++..+
T Consensus 209 I~t~edl~~a~~~l~~~~ 226 (401)
T 2ggo_A 209 IGKPWNIIDVNKWALDNL 226 (401)
T ss_dssp CCSHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 999999999999998753
No 18
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.93 E-value=4.8e-25 Score=215.89 Aligned_cols=231 Identities=13% Similarity=0.217 Sum_probs=165.3
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.|||||||.|+|| ...+||+|+|++|+|||+|++++|.++|+++++|++++. .+.+.+++.+ .++.
T Consensus 4 ~~~~aiIlA~G~g~Rl----~~~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~--~~~i~~~~~~-----~~~~ 72 (456)
T 2v0h_A 4 KALSAVILAAGKGTRM----YSDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHG--GDLMRTHLAN-----EQVN 72 (456)
T ss_dssp CCEEEEEECCCCCGGG----CSSSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTT--HHHHHHHTTT-----CCCE
T ss_pred CcceEEEECCCCCccc----CCCCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhhc-----CCcE
Confidence 5678999999999999 446899999999999999999999999999999999864 2466665543 2566
Q ss_pred EEEcCCCCCHHHHHHHHHHhcC-CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCC
Q 018019 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~ 157 (362)
++.++...|++++++.+++++. .+++++++||. +.+.++.++++.|.+ ++++++..+..
T Consensus 73 ~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~---------------- 134 (456)
T 2v0h_A 73 WVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLD---------------- 134 (456)
T ss_dssp EEECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS----------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecC----------------
Confidence 7777777999999999998885 57899999996 677889999998866 56777665432
Q ss_pred CCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhcCccc----ccc
Q 018019 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF----QSL 233 (362)
Q Consensus 158 ~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~~~~~----~s~ 233 (362)
++..|+.+..| +++ +..+.++++. ... .....+.++|+|+|+++.|...++..... ...
T Consensus 135 -~~~~~g~v~~~-~g~-v~~~~ek~~~------~~~--------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~ 197 (456)
T 2v0h_A 135 -NPTGYGRIIRE-NGN-VVAIVEQKDA------NAE--------QLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYY 197 (456)
T ss_dssp -SCTTSCEEEEE-TTE-EEEEECTTTC------CHH--------HHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCC
T ss_pred -CCCccceEEEc-CCc-EEEEEECCCC------Chh--------HhcCcEEEEEEEEEEHHHHHHHHHHhccccccccEE
Confidence 14567888777 555 4566532111 000 11246889999999999776666532111 111
Q ss_pred hhhhhhHHHHhhhhcccccCCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeeEEEEEecCCceE
Q 018019 234 KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYC 313 (362)
Q Consensus 234 ~~d~ip~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 313 (362)
..|+++.+...+ .++++|..++...+
T Consensus 198 ~~d~~~~~~~~g------------------------------------------------------~~v~~~~~~~~~~~ 223 (456)
T 2v0h_A 198 LTDLIALANQDN------------------------------------------------------CQVVAVQATDVMEV 223 (456)
T ss_dssp GGGHHHHHHHTT------------------------------------------------------CCEEEEECSCTGGG
T ss_pred HHHHHHHHHHcC------------------------------------------------------CEEEEEEeCCcceE
Confidence 246666655332 34577766322235
Q ss_pred EEeCCHHHHHHHhHHHhh
Q 018019 314 VRLNSIQAFMDINRDVIG 331 (362)
Q Consensus 314 ~rin~~~~Y~~~n~~~l~ 331 (362)
..|||+..|.++++.+..
T Consensus 224 ~~I~tpeDl~~a~~~l~~ 241 (456)
T 2v0h_A 224 EGANNRLQLAALERYFQN 241 (456)
T ss_dssp CCCSSHHHHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHH
Confidence 689999999999886553
No 19
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.93 E-value=5.6e-25 Score=215.58 Aligned_cols=180 Identities=18% Similarity=0.289 Sum_probs=135.3
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|+|.|||||||.|+||. ..+||+|+|++|+|||+|++++|.++|+++|+|++++. .+.+.+++.. .++.
T Consensus 7 ~~~~aiIlA~G~g~Rl~----~~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~--~~~i~~~~~~-----~~~~ 75 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMY----SDLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHG--GELLKKTLAD-----PSLN 75 (459)
T ss_dssp CCEEEEEEECCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSC--HHHHHHHC----------C
T ss_pred CcceEEEECCCCCccCC----CCCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhcc-----CCcE
Confidence 57899999999999994 47899999999999999999999999999999999865 3466666653 2456
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCC-CcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCC
Q 018019 81 VATVPEDVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~-~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~ 157 (362)
++.++...|++++++.+++++.. +++++++||. +.+.++.++++.|.+ .+++++..+..
T Consensus 76 ~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~---------------- 137 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLD---------------- 137 (459)
T ss_dssp EEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS----------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecC----------------
Confidence 66667779999999999998863 7899999996 777889999998865 45566555432
Q ss_pred CCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhc
Q 018019 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (362)
Q Consensus 158 ~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~ 226 (362)
++..|+++..| +++ +..+.++++.... ...++++++|+|+|+++.|..+++.
T Consensus 138 -~~~~~g~v~~~-~g~-v~~~~ek~~~~~~--------------~~~~~~~~~Giy~~~~~~l~~~l~~ 189 (459)
T 4fce_A 138 -NPSGYGRIVRE-NGD-VVGIVEHKDASDA--------------QREINEINTGILVANGRDLKRWLSL 189 (459)
T ss_dssp -CCTTSCEEEEE-TTE-EEEEECGGGCCTT--------------GGGCCEEEEEEEEEEHHHHHHHHHT
T ss_pred -CCCcccEEEeC-CCc-EEEEEECCCCChH--------------HhhccEEEEEEEEEEHHHHHHHHHH
Confidence 25567888887 565 4566532211000 1234789999999999988777654
No 20
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.92 E-value=1.4e-24 Score=196.45 Aligned_cols=168 Identities=16% Similarity=0.243 Sum_probs=119.0
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|+|.|||||||.|+||+|+ |..+||+|+|++|+|||+|+++++.++|+++|+|++++.. +++.++...+ ++.
T Consensus 24 ~~~~aiIlAaG~gtRl~pl-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~-----~~~ 95 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPL-TENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLK--EQFDYLKEKY-----GVR 95 (254)
T ss_dssp CCCEEEEEECSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTG--GGGTHHHHHH-----CCE
T ss_pred cCceEEEECCCCcccCCcc-cCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcH--HHHHHHHHhC-----CcE
Confidence 4688999999999999999 8999999999999999999999999999999999998652 3454444332 566
Q ss_pred EEEcCC--CCCHHHHHHHHHHhcCCCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCC
Q 018019 81 VATVPE--DVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTK 158 (362)
Q Consensus 81 i~~~~~--~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~ 158 (362)
++..++ ..|++++++.+.+.+. +++|++||.++..++ ++.+.+.++.+|+. .. ++
T Consensus 96 iv~~~~~~~~g~~~al~~a~~~~~--~~lv~~~D~~~~~~~---~~~~~~~~~~~t~~---~~--~~------------- 152 (254)
T 1jyk_A 96 LVFNDKYADYNNFYSLYLVKEELA--NSYVIDADNYLFKNM---FRNDLTRSTYFSVY---RE--DC------------- 152 (254)
T ss_dssp EEECTTTTTSCTHHHHHTTGGGCT--TEEEEETTEEESSCC---CCSCCCSEEEEECE---ES--SC-------------
T ss_pred EEECCCccCCCcHHHHHHHHHHCC--CEEEEeCCcccCHHH---HHHHHhCCceEEEE---cc--cC-------------
Confidence 776543 5799999999888773 589999997654442 22222233333322 11 11
Q ss_pred CCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHH
Q 018019 159 KPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (362)
Q Consensus 159 ~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~ 223 (362)
...|+++ +|++|++ ..+.+ ++ ...++++|+|+|+++.+..+
T Consensus 153 -~~~~~v~-~d~~g~v-~~~~e-----~~----------------~~~~~~~Giy~~~~~~~~~l 193 (254)
T 1jyk_A 153 -TNEWFLV-YGDDYKV-QDIIV-----DS----------------KAGRILSGVSFWDAPTAEKI 193 (254)
T ss_dssp -SSCCEEE-ECTTCBE-EEEEC-----CC----------------SSEEBCCSEEEECHHHHHHH
T ss_pred -CCCeEEE-ECCCCeE-EEEEE-----CC----------------CCCcEEEEEEEEcHHHHHHH
Confidence 1246654 7877765 45552 21 12578999999999765433
No 21
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.92 E-value=5.9e-24 Score=192.20 Aligned_cols=191 Identities=18% Similarity=0.202 Sum_probs=137.1
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.|||||||.|||| . ||+|+|++|||||+|+++++..+|+++|+|+++. +.+.+++..+ ++.
T Consensus 1 M~~~aiIlA~G~stRl----p---~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~~----~~i~~~~~~~-----g~~ 64 (252)
T 3oam_A 1 MSFTVVIPARYQSTRL----P---GKPLADIGGKPMIQWVYEQAMQAGADRVIIATDD----ERVEQAVQAF-----GGV 64 (252)
T ss_dssp CCEEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CceEEEEecCcCCCCC----C---CcceeeECCEEHHHHHHHHHHhCCCCeEEEECCH----HHHHHHHHHc-----CCE
Confidence 8899999999999999 3 7999999999999999999999999999999862 4777777642 455
Q ss_pred EEE--cCCCCCHHHHHHHHHHhc---CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCC
Q 018019 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (362)
Q Consensus 81 i~~--~~~~~gt~~al~~~~~~i---~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (362)
++. ++...||++ +..+.+.+ ..+.+++++||. +.+.++..+++.|.+.++++++++.+.. +|.++.
T Consensus 65 v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~--~~~~~~---- 137 (252)
T 3oam_A 65 VCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE--DEAEVF---- 137 (252)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC--CHHHHT----
T ss_pred EEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC--CHHHhh----
Confidence 554 345688887 55666666 346799999994 6678899999999888888988887654 222211
Q ss_pred ccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhc
Q 018019 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (362)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~ 226 (362)
..+.+.+.+|++|+++ .+.+ +++.-.+.-...........++.++|+|+|++++|..+...
T Consensus 138 ------~p~~g~vv~d~~g~v~-~fsr-----~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~ 198 (252)
T 3oam_A 138 ------NPNAVKVITDKSGYAL-YFSR-----ATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDW 198 (252)
T ss_dssp ------CTTSCEEEECTTSBEE-EEES-----SCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHS
T ss_pred ------CCCceEEEECCCCeEE-EEeC-----CCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcC
Confidence 1123788999988865 5542 22211111000000000134789999999999999888653
No 22
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.91 E-value=5.4e-24 Score=200.05 Aligned_cols=190 Identities=19% Similarity=0.236 Sum_probs=133.0
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCC-cchHHHHHHHHHhC-CCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g-~plI~~~l~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|.+||||||.||||+||++..+||+|+|++| +|||+|+++++..+ |+++|+|++++... +.+.+++.+. ....
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~-~~i~~~l~~~----~~~~ 76 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYV-ERTKKELPEL----PDEN 76 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGH-HHHHHHCTTS----CGGG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHH-HHHHHHhhcc----ccce
Confidence 7899999999999999933789999999999 99999999999997 89999999986532 3566665431 1123
Q ss_pred EEEcCCCCCHHHHHHHHHHhcC-CCcEEEEeCCcccCC--Ch----HHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCC
Q 018019 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDLVSDV--PP----GAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~i~~~--~l----~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (362)
++.++...||++++..+...+. ++.+++++||+++.. ++ ..+++.|.+.++.+|+.+.+..
T Consensus 77 ii~e~~~~gta~ai~~a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~------------ 144 (336)
T 2x65_A 77 IIAEPMKKNTAPACFIGTKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTR------------ 144 (336)
T ss_dssp EEEESSCCCHHHHHHHHHTTSCTTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCS------------
T ss_pred EEeCCCCCCcHHHHHHHHHhhCCCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeeccc------------
Confidence 5666778999999998877664 356899999986643 44 4445557665777777655432
Q ss_pred ccCCCCCCcceEEEEcCC----CcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHH
Q 018019 154 KDKTKKPGRYNIIGMDPT----KQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (362)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~----~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~ 224 (362)
....||++..+++ ...+..+.++++.+. ..+.+. ....++++|+|+|++++|...+
T Consensus 145 -----~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~----a~~~~~------~g~y~~n~Giy~~~~~~ll~~l 204 (336)
T 2x65_A 145 -----PETGYGYIEIGEELEEGVHKVAQFREKPDLET----AKKFVE------SGRFLWNSGMFLWKAREFIEEV 204 (336)
T ss_dssp -----CCSSSEEEEEEEEEETTEEEEEEEEESCCHHH----HHHHHH------HTCEEEEEEEEEEEHHHHHHHH
T ss_pred -----CCCCceEEEECCccCCCccEEEEEEECCChHH----HHHHHh------cCCeEEEeeeEEEEHHHHHHHH
Confidence 1357899987653 123456664332211 111111 1125889999999999884343
No 23
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.90 E-value=7.4e-24 Score=199.23 Aligned_cols=183 Identities=21% Similarity=0.272 Sum_probs=127.8
Q ss_pred CCceEEEEeCCCCCCCCCCCC-CCCCeeeeeeCC-cchHHHHHHHHHhC-CCCeEEEEccCcchHHHHHHHHHhhhcCCc
Q 018019 1 MDFQVVVLAGGTSKKLVPLVS-KEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRL 77 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t-~~~pK~llpv~g-~plI~~~l~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~ 77 (362)
|+|.+||||||.||||+|| | ..+||+|+|++| +|||+|+++++..+ |+++++|++++... +.+.+++. ..
T Consensus 1 M~m~~VILAgG~GtRl~Pl-s~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~-~~i~~~l~-----~~ 73 (337)
T 2cu2_A 1 MKTYALVMAGGRGERLWPL-SREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQE-AVARPYAD-----GI 73 (337)
T ss_dssp CCEEEEEECCCCCGGGTTT-CBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGH-HHHGGGCS-----SS
T ss_pred CCeEEEEEcCCCcccCCcc-CCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHH-HHHHHHhc-----cC
Confidence 8899999999999999999 6 689999999999 99999999999998 89999999985432 23333332 12
Q ss_pred ceEEEEcCCCCCHHHHHHHHHHhc----CCCcEEEEeCCcccCC--ChHHHHH----HHHhcCCeEEEEEeeeccCCCcc
Q 018019 78 HVEVATVPEDVGTAGALRAIAHHL----TAKDVLVVSGDLVSDV--PPGAVTA----AHRRHDAVVTAMICSVPVSGLSE 147 (362)
Q Consensus 78 ~i~i~~~~~~~gt~~al~~~~~~i----~~~~~lv~~~D~i~~~--~l~~~l~----~h~~~~a~~t~l~~~~~~~~~~~ 147 (362)
.++.++...||+.++..+.. + .++.+++++||+++.. ++..+++ .|.+ ++.+|+.+.+..
T Consensus 74 --~~i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~------ 143 (337)
T 2cu2_A 74 --RLLLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTR------ 143 (337)
T ss_dssp --EEEEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSS------
T ss_pred --ceEecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCC------
Confidence 22445677899999988865 4 2467999999976543 4444444 3443 677777665432
Q ss_pred cCCCCCccCCCCCCcceEEEEcCC----CcEEEEeecCcccccccccchHHHhhcCceeeec-CceeceEEeeCHHHHHH
Q 018019 148 AGSSGAKDKTKKPGRYNIIGMDPT----KQFLLHIATGAELEKDTRIRKSILRAVGQMDIRA-DLMDAHMYAFNRSVLQE 222 (362)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~~d~~----~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~-~l~~~giYi~s~~vl~~ 222 (362)
.+..||++..+++ ++ +..+.++++.+. .+..+ .+ .++++|+|+|++++|..
T Consensus 144 -----------~~t~yG~I~~~~~~~~~~~-V~~f~EKp~~~~----a~~~~--------~~g~~~n~Giy~f~~~~ll~ 199 (337)
T 2cu2_A 144 -----------PETEYGYIRLGPREGAWYR-GEGFVEKPSYAE----ALEYI--------RKGYVWNGGVFAFAPATMAE 199 (337)
T ss_dssp -----------CCSSSCEEEEEEEETTEEE-EEEEECCCCHHH----HHHHH--------HTTCEEEEEEEEECHHHHHH
T ss_pred -----------CCCCceEEEECCcccccCe-EEEEEeCCChHH----HHHHh--------hcCCEEEEEEEEEeHHHHHH
Confidence 2457899988754 33 456664332111 11111 12 68999999999998844
Q ss_pred HH
Q 018019 223 VL 224 (362)
Q Consensus 223 ~~ 224 (362)
.+
T Consensus 200 ~l 201 (337)
T 2cu2_A 200 LF 201 (337)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 24
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.88 E-value=2.6e-21 Score=175.56 Aligned_cols=190 Identities=17% Similarity=0.209 Sum_probs=133.8
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.|||||||.|||| . +|+|+|++|||||+|+++++..+|+++|+|+++. +.+.+++.. .++.
T Consensus 17 M~~~aIIlA~G~stRl----p---~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~~----~~i~~~~~~-----~g~~ 80 (264)
T 3k8d_A 17 MSFVVIIPARYASTRL----P---GKPLVDINGKPMIVHVLERARESGAERIIVATDH----EDVARAVEA-----AGGE 80 (264)
T ss_dssp -CCEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHH-----TTCE
T ss_pred CceEEEEEcCCCCCCC----C---CcceeeECCeEHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHH-----cCCE
Confidence 7889999999999999 3 4999999999999999999999999999999862 467777664 2455
Q ss_pred EEE--cCCCCCHHHHHHHHHHhc---CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCC
Q 018019 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (362)
Q Consensus 81 i~~--~~~~~gt~~al~~~~~~i---~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (362)
++. ++...|++. +..+...+ ..+.++++.||. +.+.++..+++.|.+.++++++++.+.. ++.+.+.
T Consensus 81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~--d~~~~~~--- 154 (264)
T 3k8d_A 81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIH--NAEEAFN--- 154 (264)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECC--SHHHHTC---
T ss_pred EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcC--CHHHccC---
Confidence 654 344678776 77777666 346799999994 6778899999999888888888877653 2222211
Q ss_pred ccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHh
Q 018019 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
+... -+++|++|+++ .+. +++..-++........-...+.+.++|+|+|++++|..+..
T Consensus 155 ------p~~v-kVv~d~~g~~l-~fs-----r~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 155 ------PNAV-KVVLDAEGYAL-YFS-----RATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp ------TTSC-EEEECTTSBEE-EEE-----SSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHH
T ss_pred ------CCce-EEEECCCCeEE-EEe-----cCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHh
Confidence 2222 25678888865 554 33322222111000000122478999999999999988854
No 25
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.88 E-value=1.9e-21 Score=175.60 Aligned_cols=190 Identities=17% Similarity=0.243 Sum_probs=126.4
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.|||||||.|||| . ||+|+|++|||||+|+++.+..+|+++|+|+++. +.+.+++.. .++.
T Consensus 8 M~~~aIIlA~G~stRl----~---~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~~----~~i~~~~~~-----~g~~ 71 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRL----P---GKALVDIAGKPMIQHVYESAIKSGAEEVVIATDD----KRIRQVAED-----FGAV 71 (256)
T ss_dssp -CCEEEEECCCC---C----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHH-----TTCE
T ss_pred CCceEEEEcCCCCCCC----C---CCCeeeECCchHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHH-----cCCe
Confidence 6778999999999999 3 7999999999999999999999999999999863 467777764 2455
Q ss_pred EEEc--CCCCCHHHHHHHHHHhc---CCCcEEEEeCCc--ccCCChHHHHHHHHhc-CCeEEEEEeeeccCCCcccCCCC
Q 018019 81 VATV--PEDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSG 152 (362)
Q Consensus 81 i~~~--~~~~gt~~al~~~~~~i---~~~~~lv~~~D~--i~~~~l~~~l~~h~~~-~a~~t~l~~~~~~~~~~~~~~~~ 152 (362)
++.. +...|++. ++.+.+.+ ..+.++++.||. +.+..+..+++.|.+. +++++.++.+.. ++.+..
T Consensus 72 v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~--~~~~~~--- 145 (256)
T 3tqd_A 72 VCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPIT--EVDELF--- 145 (256)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECC--CHHHHT---
T ss_pred EEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcC--CHHHhh---
Confidence 5543 34577765 77787777 346799999995 6677899999999874 556666665442 222211
Q ss_pred CccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHh-hcCceeeecCceeceEEeeCHHHHHHHHh
Q 018019 153 AKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILR-AVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 153 ~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~-~~~~~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
++..+. |++|++|+.+ .+.+ ++..-++.... ........+++.+.|+|+|++++|..+..
T Consensus 146 ------~p~~vk-vv~d~~g~~l-~fsr-----~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 146 ------NPHSTK-VVLNRRNYAL-YFSH-----APIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLS 206 (256)
T ss_dssp ------CTTSCE-EEECTTSBEE-EEES-----SCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHH
T ss_pred ------CCCccE-EEECCCCEEe-EEec-----CCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHh
Confidence 123333 5688888865 5542 33211111000 00000112578999999999999988854
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.84 E-value=1.5e-19 Score=161.10 Aligned_cols=178 Identities=19% Similarity=0.216 Sum_probs=120.4
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++++.++ +++|+|++++ +.+.++++. . +.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~----~~i~~~~~~-----~-~~ 62 (234)
T 2y6p_A 1 MRRAVIIPARLGSTRL----K---EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDS----ERVKEVVED-----L-CE 62 (234)
T ss_dssp -CEEEEEECCSCCTTT----T---TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESC----HHHHHHHTT-----T-SE
T ss_pred CceEEEEEcCCCCCCC----C---CCcceeECCEEHHHHHHHHHHHh-CCEEEEECCh----HHHHHHHHh-----c-eE
Confidence 8889999999999999 3 89999999999999999999999 9999999874 356666653 2 34
Q ss_pred EEEcC--CCCCHHHHHHHHHHhcCCCcEEEEeCCc-ccC-CChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccC
Q 018019 81 VATVP--EDVGTAGALRAIAHHLTAKDVLVVSGDL-VSD-VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (362)
Q Consensus 81 i~~~~--~~~gt~~al~~~~~~i~~~~~lv~~~D~-i~~-~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~ 156 (362)
++..+ ...|+++++ .+++.+..+.+++++||. +.+ .++..+++.|.+.++.+|++..... +
T Consensus 63 ~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~-----~--------- 127 (234)
T 2y6p_A 63 VFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKE-----A--------- 127 (234)
T ss_dssp EEECCTTCCSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSG-----G---------
T ss_pred EEECCcccccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHH-----H---------
Confidence 44432 356777765 466666557799999996 555 7899999999887755555543110 0
Q ss_pred CCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHh
Q 018019 157 TKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 157 ~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
...+..+. +..+++|++ ..+.+ ++....+. .. .. ..+.++|+|+|+++.|..+..
T Consensus 128 ~~~~~~~~-~~~~~~g~v-~~~~e-----~~~~~~~~----~~--~~-~~~~~~giy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 128 YERPEDVK-VVLDREGYA-LYFSR-----SPIPYFRK----ND--TF-YPLKHVGIYGFRKETLMEFGA 182 (234)
T ss_dssp GGCTTSCE-EEECTTSBE-EEEES-----SCCSCCSS----CC--SS-CCEEEEEEEEEEHHHHHHHHH
T ss_pred hcCCCceE-EEEcCCCCE-eeeec-----CCCCcccc----cc--cc-eeeEEEEEEEcCHHHHHHHHh
Confidence 00122333 345666764 45553 22100000 00 01 256799999999999977754
No 27
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.81 E-value=5.7e-19 Score=159.18 Aligned_cols=187 Identities=20% Similarity=0.220 Sum_probs=123.3
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHH-HHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVL-EQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l-~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
+.|||||||.|+|| . +|+|+|++|||||+|++ +.+..+++++|+|+++. +.+.+++.. .++.+
T Consensus 2 ~~aiIlA~G~stR~----~---~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~~----~~i~~~~~~-----~g~~v 65 (253)
T 4fcu_A 2 KHIVIPARFSSSRL----P---GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD----ERIAEICRA-----EGVDV 65 (253)
T ss_dssp EEEEEECCSCCTTS----T---TGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEESC----HHHHHHHHT-----TTCCE
T ss_pred eEEEEEeCCCCCCC----C---CCceeeECCeEhHHHHHHHHHHhcCCCEEEEECCH----HHHHHHHHH-----cCCeE
Confidence 47999999999999 3 39999999999999999 99998899999999973 466666653 34555
Q ss_pred EE--cCCCCCHHHHHHHHHHhcC---CCcEEEEeCC--cccCCChHHHHHHHHhc-CCe-EEEEEeeeccCCCcccCCCC
Q 018019 82 AT--VPEDVGTAGALRAIAHHLT---AKDVLVVSGD--LVSDVPPGAVTAAHRRH-DAV-VTAMICSVPVSGLSEAGSSG 152 (362)
Q Consensus 82 ~~--~~~~~gt~~al~~~~~~i~---~~~~lv~~~D--~i~~~~l~~~l~~h~~~-~a~-~t~l~~~~~~~~~~~~~~~~ 152 (362)
+. ++...|+ +++..+++.+. .+.++++.|| ++.+..+..+++.|.+. ++. +|++. ... ++.+.
T Consensus 66 ~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~-~~~--~~~~~---- 137 (253)
T 4fcu_A 66 VLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCE-PIH--ALDEF---- 137 (253)
T ss_dssp EECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEE-ECC--CHHHH----
T ss_pred EEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeE-EcC--CHHHc----
Confidence 54 3344666 57888877764 3679999999 46678899999999876 344 44443 321 11000
Q ss_pred CccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHh
Q 018019 153 AKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 153 ~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
.+|..+ -++.|++|+++. +.+ +++.-.+..............+.++|+|+|++++|..+..
T Consensus 138 -----~~p~~~-kvv~d~~g~~l~-fsr-----~~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~ 198 (253)
T 4fcu_A 138 -----QRDSIV-KVVMSKQNEALY-FSR-----ATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVT 198 (253)
T ss_dssp -----HCTTSC-EEEECTTSBEEE-EES-----SCCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTT
T ss_pred -----cCCCcc-EEEECCCCeEEE-ecC-----CCCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHh
Confidence 123333 357888888754 432 2211111000000000012467899999999999988853
No 28
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.81 E-value=3.1e-18 Score=155.36 Aligned_cols=189 Identities=16% Similarity=0.204 Sum_probs=124.1
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.|||||||.|+|| . +|+|+|++|+|||+|+++++..+++++|+|++++ +.+.+++.. .++.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~----~~i~~~~~~-----~~~~ 64 (262)
T 1vic_A 1 MSFTVIIPARFASSRL----P---GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN----ENVADVAKS-----FGAE 64 (262)
T ss_dssp -CCEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHH-----TTCE
T ss_pred CCcEEEEEcCCCCCCC----C---CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc----HHHHHHHHh-----cCCE
Confidence 8899999999999999 2 3999999999999999999999999999999874 356666653 2455
Q ss_pred EEEcC--CCCCHHHHHHHHHHhcC---CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCC
Q 018019 81 VATVP--EDVGTAGALRAIAHHLT---AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (362)
Q Consensus 81 i~~~~--~~~gt~~al~~~~~~i~---~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (362)
++..+ ...|++ .+..+...+. .+.+++++||. +.+.++..+++.|.+.++++++++.+.. ++.+..
T Consensus 65 ~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~~~~---- 137 (262)
T 1vic_A 65 VCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIH--DAEELF---- 137 (262)
T ss_dssp EEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECC--CHHHHT----
T ss_pred EEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecC--CHHHhc----
Confidence 65543 345665 4555555553 46699999995 6677899999999888878777665532 111100
Q ss_pred ccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHh-----hcCceeeecCceeceEEeeCHHHHHHHHh
Q 018019 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILR-----AVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~-----~~~~~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
...+..+..+++|+++ .+.+ +.....++. + +...-.....+.++|+|+|++++|..+..
T Consensus 138 ------~~~~~~~~~~~~g~v~-~f~~-----~~~~~~r~~-~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~ 201 (262)
T 1vic_A 138 ------NPNAVKVLTDKDGYVL-YFSR-----SVIPYDRDQ-FMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQ 201 (262)
T ss_dssp ------CTTSCEEEECTTSBEE-EEES-----SCSSCCHHH-HTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHH
T ss_pred ------CCCceEEEECCCCCEe-eeec-----CCCCcCCcc-ccccccccccccccceEEEEEEEEeeHHHHHHHHh
Confidence 1233445557777654 4432 211111111 0 00000112357899999999999876643
No 29
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.80 E-value=3.8e-18 Score=153.03 Aligned_cols=181 Identities=18% Similarity=0.235 Sum_probs=121.7
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCC-CeEEEEccCcchHHHHHHHHHhhhcCCcce
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNI-KDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi-~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i 79 (362)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+..+|+ ++|+|++++ +.+.+++.. .++
T Consensus 1 m~~~aiIlA~G~~~R~----~---~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~----~~i~~~~~~-----~~~ 64 (245)
T 1h7e_A 1 SKAVIVIPARYGSSRL----P---GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD----PRVEQAVQA-----FGG 64 (245)
T ss_dssp CCEEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC----HHHHHHHHH-----TTC
T ss_pred CCeEEEEEcCCcCCCC----C---CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc----HHHHHHHHH-----cCC
Confidence 8899999999999999 3 8999999999999999999999996 999999974 356666654 246
Q ss_pred EEEEc--CCCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHHHHHhc-CCeEEEEEeeeccCCCcccCCCCCc
Q 018019 80 EVATV--PEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSGAK 154 (362)
Q Consensus 80 ~i~~~--~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~-~a~~t~l~~~~~~~~~~~~~~~~~~ 154 (362)
.++.. +...|+++++ .+...+..+.+++++||. +.+.++..+++.|.+. ++++++++.+.. +...
T Consensus 65 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~------ 134 (245)
T 1h7e_A 65 KAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAIS---AAEA------ 134 (245)
T ss_dssp EEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEEC---HHHH------
T ss_pred eEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCC---HHHh------
Confidence 66653 3346776544 455555556799999995 5567899999999887 777777665541 1100
Q ss_pred cCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHHH
Q 018019 155 DKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (362)
Q Consensus 155 ~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~ 224 (362)
..+.. ..+..+++|++ ..+.+ +...-.++. ...+.+.++|+|+|+++.|..+.
T Consensus 135 ---~~~~~-~~~~~~~~g~~-~~~~~-----~~~~~~r~~-------~~~~~~~~~g~y~~~~~~l~~~~ 187 (245)
T 1h7e_A 135 ---AEPST-VKVVVNTRQDA-LYFSR-----SPIPYPRNA-------EKARYLKHVGIYAYRRDVLQNYS 187 (245)
T ss_dssp ---TCTTS-CEEEECTTCBE-EEEES-----SCSSCCTTG-------GGCCEEEEEEEEEEEHHHHHHGG
T ss_pred ---cCCCC-cEEEECCCCcE-EEeec-----CCCCCCccc-------ccCceeEEEEEEEcCHHHHHHHH
Confidence 00111 11233566664 34442 111000000 01124679999999999886654
No 30
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.76 E-value=1.8e-17 Score=147.60 Aligned_cols=167 Identities=14% Similarity=0.185 Sum_probs=106.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
++.|||||||.|+||+|+ ||+|+|++|+|||+|+++++.++ +++|+|++ +.. +.+.+++...+ ..++.+
T Consensus 18 ~~~~iIlA~G~g~R~~~~-----~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~--~~~~~~~~~~~--~~~~~~ 86 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-----PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRY--ADDIDAFLKDK--GFNYKI 86 (232)
T ss_dssp CEEEEEEECC------CC-----CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STT--HHHHHHHHTTS--CCCEEE
T ss_pred cceEEEECCcCcCcCCCC-----CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CCh--HHHHHHHHHhc--CCcEEE
Confidence 478999999999999654 89999999999999999999998 99999998 442 35555543211 124666
Q ss_pred EEcCCC-CCHHHHHHHHHHhcCCCcEEEEeCCcccCCC-hHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCC
Q 018019 82 ATVPED-VGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (362)
Q Consensus 82 ~~~~~~-~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (362)
+.++.. .|++++++.+++.+. +++++++||..++.+ +..+++ .. . +++...... ..
T Consensus 87 v~~~~~~~g~~~~i~~a~~~~~-~~~lv~~~D~p~~~~~~~~l~~----~~-~-~~~~~~~~~---------------~~ 144 (232)
T 2xme_A 87 VRHDRPEKGNGYSLLVAKNHVE-DRFILTMGDHVYSQQFIEKAVR----GE-G-VIADREPRF---------------VD 144 (232)
T ss_dssp EECSCGGGCHHHHHHTTGGGCC-SSEEEEETTEEECHHHHHHHTT----CC-E-EEEESSCSS---------------SC
T ss_pred EECCCCCCCcHHHHHHHHHHCC-CCEEEEcCCcccCHHHHHHHHh----CC-C-cEEEccccc---------------cC
Confidence 665543 799999999988885 689999999865433 233332 21 2 222211100 01
Q ss_pred CCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCceeeecCceeceEEeeCHHHHHHH
Q 018019 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (362)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~ 223 (362)
+..++.+..+ +|+ +..+. ++. ...+++++|+|++++++|..+
T Consensus 145 ~~~~~~v~~~-~g~-v~~~~-----~~~---------------~~~~~~~~g~~~~~~~~~~~l 186 (232)
T 2xme_A 145 IGEATKIRVE-DGR-VAKIG-----KDL---------------REFDCVDTGFFVLDDSIFEHA 186 (232)
T ss_dssp TTTSCEEEEE-TTE-EEEEE-----TTC---------------SSCSEEEEEEEEECTTHHHHH
T ss_pred CCcceEEEEc-CCE-EEEee-----cCC---------------CCcceEEEEEEEECHHHHHHH
Confidence 2345556665 454 44554 221 123567899999999999754
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.76 E-value=1.2e-17 Score=150.05 Aligned_cols=128 Identities=14% Similarity=0.165 Sum_probs=93.1
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
.+.+||||||.|+||.+ ..+||+|+|++|+|||+|+++++.+++ +++|+|++++... +.+.+.+..+..+ ..+.
T Consensus 3 ~~~aIIlAaG~g~Rm~~---~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~-~~~~~~~~~~~~~-~~~~ 77 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGN---VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWM-NHAEDNIKKYISD-DRIV 77 (246)
T ss_dssp CEEEEEECC-----C-C---SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGH-HHHHHHHHHHCCC-TTEE
T ss_pred ccEEEEECCccccccCC---CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHH-HHHHHHHHHhCCC-CCEE
Confidence 46899999999999943 278999999999999999999999998 9999999986532 3455555544222 2344
Q ss_pred EEEcCCCCCHHHHHHHHHHhcC-------CCcEEEEeCC--cccCCChHHHHHHHHhcCCeEEEE
Q 018019 81 VATVPEDVGTAGALRAIAHHLT-------AKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAM 136 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~-------~~~~lv~~~D--~i~~~~l~~~l~~h~~~~a~~t~l 136 (362)
++ ....+..++++.+++.+. .+.++++.|| ++....+.++++.+.+.++.++++
T Consensus 78 ~~--~~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~~ 140 (246)
T 3f1c_A 78 VI--EGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTVI 140 (246)
T ss_dssp EE--ECCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEEE
T ss_pred EE--CCCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEEE
Confidence 43 344677889988877764 3568999999 577888999999999887666543
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.75 E-value=2.3e-17 Score=146.86 Aligned_cols=124 Identities=18% Similarity=0.250 Sum_probs=84.1
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhC-CCCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
+.|||||||.|+||.+ ..+||+|+|++|+|||+|+++++.++ ++++|+|++++... +.+.+++..+.. ......
T Consensus 3 ~~~iIlA~G~g~R~~~---~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~-~~~~~~~~~~~~-~~~~~~ 77 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI---SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWV-SHAEDLVDKYLP-LYKERI 77 (236)
T ss_dssp EEEEEEEC--------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGH-HHHHHHHHHHCG-GGGGGE
T ss_pred eEEEEeCCccccccCC---CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHH-HHHHHHHHhccc-cccCce
Confidence 6899999999999965 36899999999999999999999998 59999999986532 356666654310 011111
Q ss_pred EEcCCCCCHHHHHHHHHHhc----C--C-CcEEEEeCCc--ccCCChHHHHHHHHhcCC
Q 018019 82 ATVPEDVGTAGALRAIAHHL----T--A-KDVLVVSGDL--VSDVPPGAVTAAHRRHDA 131 (362)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i----~--~-~~~lv~~~D~--i~~~~l~~~l~~h~~~~a 131 (362)
.......|++++++.++..+ . . +.++++.||. +...++..+++.|.+.++
T Consensus 78 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 136 (236)
T 2vsh_A 78 IITKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA 136 (236)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE
T ss_pred EEECCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc
Confidence 12233468889999888776 2 3 5688899996 666789999999987665
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.72 E-value=1.7e-17 Score=147.30 Aligned_cols=124 Identities=15% Similarity=0.121 Sum_probs=94.7
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcce
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i 79 (362)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+..++ +++|+|+++. +.+.+++..+ ++
T Consensus 3 m~~~aiIlA~G~g~R~----~---~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~----~~i~~~~~~~-----~~ 66 (228)
T 1ezi_A 3 KQNIAVILARQNSKGL----P---LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG----GLIAEEAKNF-----GV 66 (228)
T ss_dssp CEEEEEEECCSSCSSS----T---TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC----HHHHHHHHHT-----TC
T ss_pred CceEEEEecCCCCCCC----C---CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC----HHHHHHHHHc-----CC
Confidence 3345999999999999 3 899999999999999999999988 7999999973 3555555432 34
Q ss_pred EEEEcC-----CCCCHHHHHHHHHHhcC--CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeee
Q 018019 80 EVATVP-----EDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSV 140 (362)
Q Consensus 80 ~i~~~~-----~~~gt~~al~~~~~~i~--~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~ 140 (362)
.++..+ ...|++++++.+++.+. .+.++++.||. +.+.++..+++.|.+.++++++...+.
T Consensus 67 ~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 136 (228)
T 1ezi_A 67 EVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPM 136 (228)
T ss_dssp EEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEEC
T ss_pred EEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 444332 34677899999988874 35699999994 566789999998877777766665543
No 34
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.72 E-value=1.1e-16 Score=141.41 Aligned_cols=125 Identities=20% Similarity=0.168 Sum_probs=92.9
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcce
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i 79 (362)
|++.+||||||.|+|| ...+||+|+|++|+|||+|+++.+..++ +++|+|++++... +.+.+++. ..++
T Consensus 1 m~~~~vIlA~G~g~R~----~~~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~-~~~~~~~~-----~~~v 70 (223)
T 2xwl_A 1 MATVAVVPAAGSGERL----RAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALT-DESKLVFG-----GEDS 70 (223)
T ss_dssp -CEEEEEECCCCCGGG----TSSSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGH-HHHHHHTC-----BTTE
T ss_pred CceEEEEECCccCccc----CCCCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHH-HHHHHHhc-----cCCe
Confidence 8899999999999999 3468999999999999999999999988 9999999986431 22333321 1245
Q ss_pred EEEEcCCCCCHHHHHHHHHHhc-CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEe
Q 018019 80 EVATVPEDVGTAGALRAIAHHL-TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMIC 138 (362)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i-~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~ 138 (362)
.++. +..+.+++++.+++.+ ..+.++++.||. +...++..+++.|. .+.++++.+.
T Consensus 71 ~~~~--~~~~~~~~i~~al~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~ 129 (223)
T 2xwl_A 71 VIVS--GGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGL 129 (223)
T ss_dssp EEEE--CCSSHHHHHHHHHTTCTTCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEE
T ss_pred EEEc--CCCCHHHHHHHHHHhcCCCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEE
Confidence 5543 3456789999998887 446688889995 55668999999883 2345555443
No 35
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.67 E-value=1.2e-15 Score=147.81 Aligned_cols=193 Identities=12% Similarity=0.113 Sum_probs=128.8
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeC-CcchHHHHHHHHHhC----CCC-eEEEEccCcchHHHHHHHHHhhhcC
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~-g~plI~~~l~~l~~~----gi~-~v~vv~~~~~~~~~i~~~~~~~~~~ 75 (362)
++.+||||||.|||| +...||+|+||. |+|+|++.++++... |+. .++|++.+.. .+.+.+++++...-
T Consensus 79 k~~vviLAGGlGTRL----g~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t-~e~t~~~f~~~~~f 153 (469)
T 2icy_A 79 KLVVLKLNGGLGTTM----GCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNT-HDDTHKIVEKYTNS 153 (469)
T ss_dssp TEEEEEEECCBSGGG----TCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTT-HHHHHHHHGGGTTS
T ss_pred cceEEEEcCCccccC----CCCCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCC-HHHHHHHHHhcccC
Confidence 468999999999999 778999999999 999999999999887 532 4555555432 46888998763111
Q ss_pred CcceEEEEc------------------------CCCCCHHHHHHHH-----HHh-cC--CCcEEEEeCCcccCCChHHHH
Q 018019 76 RLHVEVATV------------------------PEDVGTAGALRAI-----AHH-LT--AKDVLVVSGDLVSDVPPGAVT 123 (362)
Q Consensus 76 ~~~i~i~~~------------------------~~~~gt~~al~~~-----~~~-i~--~~~~lv~~~D~i~~~~l~~~l 123 (362)
...+.++.| ..+.|+|+.++.. ++. +. .++++|.++|.++......++
T Consensus 154 G~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll 233 (469)
T 2icy_A 154 NVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTIL 233 (469)
T ss_dssp SSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHH
T ss_pred CceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHH
Confidence 123444323 1468999988754 222 32 478999999998875444789
Q ss_pred HHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcCCCcE-EEEeecCcccccccccchHHHhhcCcee
Q 018019 124 AAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQF-LLHIATGAELEKDTRIRKSILRAVGQMD 202 (362)
Q Consensus 124 ~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~-l~~~~~~~~~ek~~~i~~~~l~~~~~~~ 202 (362)
..|.++++++|+.+.+... | ...+|++... +|+. ++.+.+ ++.... +.+.. .
T Consensus 234 ~~~~~~~a~~t~~v~~k~~--~--------------~~~~Gvl~~~-dg~~~vvE~~e-----~p~~~~-~e~k~----~ 286 (469)
T 2icy_A 234 KHLIQNKNEYCMEVTPKTL--A--------------DVKGGTLISY-EGKVQLLEIAQ-----VPDEHV-NEFKS----I 286 (469)
T ss_dssp HHHHHHTCSEEEEEEECCT--T--------------CCSSCEEEEE-TTEEEEECGGG-----SCGGGH-HHHHS----S
T ss_pred HHHHHcCCCeeEEEEEecc--C--------------CCceeEEEEE-CCEEEEEEEec-----cChhhh-hhhcc----c
Confidence 9999999999998876431 1 2357877753 3432 222221 111000 00000 1
Q ss_pred eecCceeceEEeeCHHHHHHHHhc
Q 018019 203 IRADLMDAHMYAFNRSVLQEVLDQ 226 (362)
Q Consensus 203 ~~~~l~~~giYi~s~~vl~~~~~~ 226 (362)
...++.++|+|+|++++|..+.++
T Consensus 287 ~~~~~~N~g~y~~~~~~L~~i~~~ 310 (469)
T 2icy_A 287 EKFKIFNTNNLWVNLKAIKKLVEA 310 (469)
T ss_dssp SSCCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccceeeEEEEEEcHHHHHHHHhc
Confidence 233577999999999999988764
No 36
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.66 E-value=3.4e-16 Score=135.34 Aligned_cols=118 Identities=26% Similarity=0.363 Sum_probs=90.8
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.+||||||.|+|| +.||+|+|++|+|||+|+++++..+++++|+|++++. .+.+.+++.. .++.
T Consensus 4 ~~~~~iIlA~G~~~R~------g~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~--~~~~~~~~~~-----~~~~ 70 (197)
T 2wee_A 4 TQITGVVLAAGRSNRL------GTPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGA--ASAVRAAMAL-----DGTD 70 (197)
T ss_dssp SEEEEEEEECCCCTTT------SSCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTT--HHHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCcccC------CCCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCC--HHHHHHHhcc-----CCCE
Confidence 5678999999999999 3789999999999999999999999999999999864 2355554432 3566
Q ss_pred EEEcC-CCCCHHHHHHHHHHhcC--CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeE
Q 018019 81 VATVP-EDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (362)
Q Consensus 81 i~~~~-~~~gt~~al~~~~~~i~--~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~ 133 (362)
++..+ ...|++++++.+++.+. .+.+++++||. +....+..+++. +.++++
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i 126 (197)
T 2wee_A 71 VVVVEDVERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV--GPATEI 126 (197)
T ss_dssp EEECC----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSE
T ss_pred EEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCE
Confidence 66543 34799999999998873 35799999996 456678888877 344444
No 37
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.66 E-value=5.2e-16 Score=134.36 Aligned_cols=119 Identities=24% Similarity=0.368 Sum_probs=93.0
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.+||||||.|+|| +.||+|+|++|+|||+|+++.+..+++++|+|++++.. +.+.+++.. .++.
T Consensus 4 ~~~~~iIlA~G~~~R~------g~~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~--~~~~~~~~~-----~~~~ 70 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRL------GTPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAA--DEVLEKVEL-----DGLD 70 (199)
T ss_dssp CCEEEEEEESSCCTTT------TSCGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTH--HHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCCCCC------CCCEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCH--HHHHHHhcc-----CCCE
Confidence 4578999999999999 37899999999999999999999999999999998542 355554432 3566
Q ss_pred EEEcC-CCCCHHHHHHHHHHhc--CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEE
Q 018019 81 VATVP-EDVGTAGALRAIAHHL--TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVT 134 (362)
Q Consensus 81 i~~~~-~~~gt~~al~~~~~~i--~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t 134 (362)
++..+ ...|++++++.+++.+ ..+.++++.||. +...++..+++. +.+++++
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~ 127 (199)
T 2waw_A 71 IVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG--GRGATIA 127 (199)
T ss_dssp EEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEE
T ss_pred EEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEE
Confidence 66533 3478899999999887 346799999996 456778888887 4455543
No 38
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.6e-15 Score=147.91 Aligned_cols=193 Identities=12% Similarity=0.135 Sum_probs=128.3
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeC-CcchHHHHHHHHHhC----CCC-eEEEEccCcchHHHHHHHHHhhhcC
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~-g~plI~~~l~~l~~~----gi~-~v~vv~~~~~~~~~i~~~~~~~~~~ 75 (362)
++.+||||||.|||| ....||+|+||+ |+|||+|+++++... |+. .++|+++... .+.+.+++++...-
T Consensus 92 k~avViLAGG~GTRm----gs~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t-~e~t~~~~~~~~~f 166 (488)
T 2i5k_A 92 KLAVLKLNGGLGTSM----GCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNT-DKDTEHLIKKYSAN 166 (488)
T ss_dssp GEEEEEECCCBSGGG----TCCSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTT-HHHHHHHHGGGCSS
T ss_pred CceEEEEcCCCcccC----CCCCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCC-HHHHHHHHHhcccc
Confidence 356799999999999 678999999999 999999999999776 532 3666666333 46788888763111
Q ss_pred CcceEEEEcC------------------------CCCCHHHHHHHH-----HHhc---CCCcEEEEeCCcccC-CChHHH
Q 018019 76 RLHVEVATVP------------------------EDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSD-VPPGAV 122 (362)
Q Consensus 76 ~~~i~i~~~~------------------------~~~gt~~al~~~-----~~~i---~~~~~lv~~~D~i~~-~~l~~~ 122 (362)
...+.++.|. .+.|+|+++... ++.+ ..++++|++||.+.. .|+. +
T Consensus 167 g~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~ 245 (488)
T 2i5k_A 167 RIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-I 245 (488)
T ss_dssp SCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-H
T ss_pred CceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-H
Confidence 1234444444 468999988733 3444 257899999997664 6886 6
Q ss_pred HHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchHHHhhcCcee
Q 018019 123 TAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMD 202 (362)
Q Consensus 123 l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~ 202 (362)
+..|..+++++++.+.+... | ...||++..+ +|+ ..+.+-.+..+. . ..... +.
T Consensus 246 L~~~~~~~a~~t~~v~~~~~--p--------------~~~yG~Iv~~-dG~--~~iVE~~e~~~e--~-~~~~~--~~-- 299 (488)
T 2i5k_A 246 LNHMIETGAEYIMELTDKTR--A--------------DVKGGTLISY-DGQ--VRLLEVAQVPKE--H-IDEFK--NI-- 299 (488)
T ss_dssp HHHHHHSCCSEEEEEEECCG--G--------------GSSSCEEEEE-TTE--EEEECGGGSCTT--S-HHHHT--CT--
T ss_pred HHHHHhcCCcEEEEEEEecC--C--------------CCceeEEEEE-CCc--EEEEEeccCCHH--H-Hhhcc--cc--
Confidence 68898999999998876431 1 1247887665 454 234431111110 0 00000 00
Q ss_pred eecCceeceEEeeCHHHHHHHHhc
Q 018019 203 IRADLMDAHMYAFNRSVLQEVLDQ 226 (362)
Q Consensus 203 ~~~~l~~~giYi~s~~vl~~~~~~ 226 (362)
......++|+|+|+.+.|..+++.
T Consensus 300 ~~~~~~Ntgi~~f~~~~L~~~l~~ 323 (488)
T 2i5k_A 300 RKFTNFNTNNLWINLKAVKRLIES 323 (488)
T ss_dssp TTCCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccCEEEEEEEEEeHHHHHHHHhh
Confidence 122567999999999999988764
No 39
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.65 E-value=9.1e-17 Score=139.13 Aligned_cols=128 Identities=20% Similarity=0.318 Sum_probs=90.6
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~ 82 (362)
|+|||||||.|+||.+ +||+|+|++|+|||+|+++++..+++++|+|++++.. +.+.+++...+....++.++
T Consensus 1 m~aiIlA~G~s~R~~~-----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~--~~i~~~~~~~~~~~~~~~~~ 73 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG-----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNT--PKTKEYINSAYKDYKNIVVI 73 (196)
T ss_dssp CEEEEEC----CGGGG-----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTC--HHHHHHHHHHTTTTTEEEE-
T ss_pred CEEEEECCCCCCcCCC-----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCCh--HHHHHHHHhhccCCCCEEEE
Confidence 5899999999999943 7899999999999999999999999999999998653 47777776532211244444
Q ss_pred EcCCCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHHHHHh-----cCCeEEEEEee
Q 018019 83 TVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRR-----HDAVVTAMICS 139 (362)
Q Consensus 83 ~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~-----~~a~~t~l~~~ 139 (362)
.....|++++++.+++.+ .+.++++.||. +.+.++..+++.|.+ .+.+..+++.+
T Consensus 74 -~~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p 135 (196)
T 3rsb_A 74 -DTSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIP 135 (196)
T ss_dssp --------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEE
T ss_pred -ECCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEE
Confidence 344578888888888777 68899999996 777889999999986 55555444443
No 40
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.62 E-value=1.6e-15 Score=134.43 Aligned_cols=120 Identities=17% Similarity=0.245 Sum_probs=85.9
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhC-CCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
++.|||||||.|+|| ...+||+|+|++|+|||+|+++.+.++ ++++|+|++++.. +.+.+++.. ..+..
T Consensus 4 ~~~aiIlAaG~g~R~----~~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~--~~~~~~~~~----~~~~~ 73 (228)
T 2yc3_A 4 SVSVILLAGGQGKRM----KMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFF--RDIFEEYEE----SIDVD 73 (228)
T ss_dssp CEEEEEECCCCC-----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGG--HHHHHTTTT----TSSSE
T ss_pred ceEEEEECCcccccc----CCCCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHH--HHHHHHHHH----hCCCc
Confidence 578999999999999 456899999999999999999999998 8999999998643 234333322 22222
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCC--CcEEEEeCC--cccCCChHHHHHHHHhcCC
Q 018019 81 VATVPEDVGTAGALRAIAHHLTA--KDVLVVSGD--LVSDVPPGAVTAAHRRHDA 131 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~--~~~lv~~~D--~i~~~~l~~~l~~h~~~~a 131 (362)
+.......|..++++.+++.+.. +.++++.|| ++...++..+++.|.+.++
T Consensus 74 v~~~~~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~ 128 (228)
T 2yc3_A 74 LSFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGA 128 (228)
T ss_dssp EEEECCCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE
T ss_pred EEEECCCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhcCc
Confidence 32223347889999999988753 457888898 4666789999999877654
No 41
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.60 E-value=1.1e-15 Score=136.04 Aligned_cols=118 Identities=25% Similarity=0.330 Sum_probs=93.9
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|+|.+||||||. |||.+. +...||+|+|++|+|||+|+++.+..+++ +|+|++.. + .+.+++ ++.
T Consensus 1 m~~~~vIlAaG~-tRl~~r-~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~~-~---~i~~~~--------~~~ 65 (232)
T 2dpw_A 1 MRPSAIVLAGGK-EAWAER-FGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGEN-P---GLVPAP--------ALT 65 (232)
T ss_dssp CCCEEEEECCCB-CSGGGT-TTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESCC-S---SCSSCC--------SEE
T ss_pred CceeEEEECCCC-Cccccc-cCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeCh-H---HHhhhc--------CeE
Confidence 889999999999 777666 45589999999999999999999999998 88887553 1 222211 444
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEee
Q 018019 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICS 139 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~ 139 (362)
+ ....|++++++.+++.+. ++++|++||. +.+.++..+++ | ..++++++...+
T Consensus 66 ~---~~~~g~~~~i~~a~~~~~-~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 66 L---PDRGGLLENLEQALEHVE-GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp E---CCCSSHHHHHHHHHHTCC-SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred e---cCCCCHHHHHHHHHHHcC-CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 4 567899999999999886 7899999996 67778999998 6 556777776554
No 42
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.60 E-value=4.2e-15 Score=131.83 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=83.2
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcce
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i 79 (362)
|++.+||||||.|+||+ ...||+|+|++|+|||+|+++.+..++ +++|+|++++.. +.+.+ +.... ...+
T Consensus 5 ~~~~aiIlA~G~g~R~~----~~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~~--~~~i 75 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFG----ADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPED--TFADK-VQTAF--PQVR 75 (231)
T ss_dssp CCEEEEEECC--------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTC--STHHH-HHHHC--TTSE
T ss_pred CceEEEEEcccccccCC----CCCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccH--HHHHH-HHhcC--CCce
Confidence 56789999999999994 357999999999999999999999886 999999998643 24444 43321 1234
Q ss_pred EEEEcCCCCCHHHHHHHHHHhc-------CCCcEEEEeCCc--ccCCChHHHHHHHHhcC
Q 018019 80 EVATVPEDVGTAGALRAIAHHL-------TAKDVLVVSGDL--VSDVPPGAVTAAHRRHD 130 (362)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i-------~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~ 130 (362)
.++ .+..|++++++.+++.+ ..+.++++.||. +....+..+++.+.+.+
T Consensus 76 ~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 76 VWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp EEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred EEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 333 45688999999887766 346789999994 55667899999887654
No 43
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.60 E-value=6.5e-15 Score=130.76 Aligned_cols=122 Identities=14% Similarity=0.123 Sum_probs=95.0
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcce
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i 79 (362)
|++.|||||||.|+|| . +|+|+|++|+|||+|+++.+..++ +++|+|++.. +.+.+++.. .++
T Consensus 2 ~~~~aiIlA~G~s~R~----~---~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~~----~~i~~~~~~-----~g~ 65 (229)
T 1qwj_A 2 PHLAALVLARGGSKGI----P---LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDH----DEIENVAKQ-----FGA 65 (229)
T ss_dssp CCEEEEEECCSCCSSS----S---CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEESC----HHHHHHHHH-----TTC
T ss_pred CcEEEEEEcCCCCCCC----C---CcccceECCEEHHHHHHHHHHhCCCcCEEEEECCh----HHHHHHHHH-----cCC
Confidence 7889999999999999 3 499999999999999999999988 6999999852 356666653 245
Q ss_pred EEEEcC-----CCCCHHHHHHHHHHhcC-CCcEEEEeCC--cccCCChHHHHHHHHhcCCeEEEEEe
Q 018019 80 EVATVP-----EDVGTAGALRAIAHHLT-AKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAMIC 138 (362)
Q Consensus 80 ~i~~~~-----~~~gt~~al~~~~~~i~-~~~~lv~~~D--~i~~~~l~~~l~~h~~~~a~~t~l~~ 138 (362)
.++..+ +..+..++++.+++.+. .+.++++.|| ++...++..+++.|.+.+++.++.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~ 132 (229)
T 1qwj_A 66 QVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVV 132 (229)
T ss_dssp EEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEE
T ss_pred EEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 555443 23455588888888773 4679999999 46667899999999887776554443
No 44
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.57 E-value=6.3e-14 Score=137.22 Aligned_cols=194 Identities=14% Similarity=0.142 Sum_probs=129.1
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeee---CCcchHHHHHHHHHh--------CC----CCeEEEEccCcchHHHHH
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL--------SN----IKDLIVVVEGADAALRVG 66 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv---~g~plI~~~l~~l~~--------~g----i~~v~vv~~~~~~~~~i~ 66 (362)
++.+||||||.|||| +...||+|+|| .|+|+|++.++++.. .| +..+++...+. .+.+.
T Consensus 102 kvavViLAGG~GTRL----g~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t--~e~t~ 175 (505)
T 1jv1_A 102 KVAVLLLAGGQGTRL----GVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRT--MESTK 175 (505)
T ss_dssp CEEEEEECCCCCCTT----SCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTT--HHHHH
T ss_pred ceEEEEEcCCccccC----CCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCC--HHHHH
Confidence 478999999999999 77899999999 799999999999876 25 55444444433 35788
Q ss_pred HHHHh--hhc-CCcceEEEEc---------------------CCCCCHHHHHHHHHH-----hc---CCCcEEEEeCCcc
Q 018019 67 GWISA--AYV-DRLHVEVATV---------------------PEDVGTAGALRAIAH-----HL---TAKDVLVVSGDLV 114 (362)
Q Consensus 67 ~~~~~--~~~-~~~~i~i~~~---------------------~~~~gt~~al~~~~~-----~i---~~~~~lv~~~D~i 114 (362)
+++++ ++. ++-.+.++.+ ..+.|+|+.+..+.. .+ ..++++|+++|.+
T Consensus 176 ~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~ 255 (505)
T 1jv1_A 176 EFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNI 255 (505)
T ss_dssp HHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBT
T ss_pred HHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCcc
Confidence 88875 221 1112444432 236899988775532 22 2478999999985
Q ss_pred -cCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcCCCcEEEEeecCcccccccccchH
Q 018019 115 -SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKS 193 (362)
Q Consensus 115 -~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~ 193 (362)
...+...++..|..+++++++.+.+.. ..+..+|++..+ +|+. .+.+-. +. +..
T Consensus 256 L~~~~d~~~lg~~~~~~~~~~~~v~~k~----------------~~~e~~Gvl~~~-dg~~--~vvEy~--E~----p~~ 310 (505)
T 1jv1_A 256 LVKVADPRFIGFCIQKGADCGAKVVEKT----------------NPTEPVGVVCRV-DGVY--QVVEYS--EI----SLA 310 (505)
T ss_dssp TCCTTCHHHHHHHHHTTCSEEEEEEECC----------------STTCSCCEEEEE-TTEE--EEECGG--GS----CHH
T ss_pred ccccchHHHHHHHHHcCCCEEEEEEEcc----------------CCccCcceEEEE-CCeE--EEEEEe--eC----CHH
Confidence 777777899999999999998876521 125677888775 3442 222111 11 111
Q ss_pred HHhh-cCceeeecCceeceEEeeCHHHHHHHHhc
Q 018019 194 ILRA-VGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (362)
Q Consensus 194 ~l~~-~~~~~~~~~l~~~giYi~s~~vl~~~~~~ 226 (362)
.... .+.-....++.++++|+|+.++|..+.+.
T Consensus 311 ~~~~~~~~g~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 311 TAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp HHHCBCTTSSBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred HhhhcccccccccceeeEEEEEecHHHHHHHHHh
Confidence 1111 11111234789999999999999888653
No 45
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.55 E-value=2.2e-14 Score=124.82 Aligned_cols=115 Identities=20% Similarity=0.270 Sum_probs=88.2
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.+||||||.|+|| . ..||+|+|++|+|||+|+++.+.. ++++|+|++++.. +.+ . ..++.
T Consensus 5 m~~~~iILAgG~s~Rm----g-~~~K~ll~i~G~pli~~~l~~l~~-~~~~ivvv~~~~~--~~~----~-----~~~~~ 67 (201)
T 1e5k_A 5 TTITGVVLAGGKARRM----G-GVDKGLLELNGKPLWQHVADALMT-QLSHVVVNANRHQ--EIY----Q-----ASGLK 67 (201)
T ss_dssp CSEEEEEECCCCCSSS----C-SSCGGGSEETTEEHHHHHHHHHHH-HCSCEEEECSSSH--HHH----H-----TTSCC
T ss_pred CcceEEEEcCCCCCcC----C-CCCCceeeECceeHHHHHHHHHHh-hCCEEEEEcCCcH--HHH----h-----hcCCe
Confidence 5688999999999999 3 378999999999999999999984 5899999998542 121 1 12455
Q ss_pred EEEcCC-C-CCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEE
Q 018019 81 VATVPE-D-VGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVT 134 (362)
Q Consensus 81 i~~~~~-~-~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t 134 (362)
++..+. . .|++++++.+++.+..+.++++.||. +....+..+++. ..+++++
T Consensus 68 ~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~--~~~~~~~ 123 (201)
T 1e5k_A 68 VIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ--RKDAPVV 123 (201)
T ss_dssp EECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT--CTTCSEE
T ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh--cCCCCEE
Confidence 554432 2 69999999999988767799999996 666668888875 3444443
No 46
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.55 E-value=5.6e-15 Score=128.13 Aligned_cols=114 Identities=19% Similarity=0.279 Sum_probs=86.3
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.+||||||.|+|| . .||+|+|++|+|||+|+++.+..+ +++|++++. .+.+.+++. .++
T Consensus 1 M~~~~iIlAgG~g~Rm----g--~~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~--~~~~~~~~~------~~~- 62 (197)
T 3d5n_A 1 MNIGVIILAAGEGKRF----G--GDKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKY--VNEMLPLLM------DQI- 62 (197)
T ss_dssp CCEEEEEECSCCTTCC----C--SSGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTT--HHHHGGGCT------TSC-
T ss_pred CceEEEEECCcCcccC----C--CCeeeCEeCceEHHHHHHHHHHhC---CEEEEECCC--HHHHHHHhc------CCE-
Confidence 8899999999999999 3 489999999999999999999876 888888754 123333222 245
Q ss_pred EEEcCC-CCCHHHHHHHHHHhcCC-CcEEEEeCCc--ccCCChHHHHHHHHhcCCeE
Q 018019 81 VATVPE-DVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (362)
Q Consensus 81 i~~~~~-~~gt~~al~~~~~~i~~-~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~ 133 (362)
++..+. ..|++++++.+++.+.. +.++++.||. +....+..+++.+ +.++++
T Consensus 63 ~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 63 VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 554333 37999999999988864 6799999996 4556678888776 444444
No 47
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.53 E-value=2.5e-13 Score=120.52 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=88.4
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
+.+||||||.|+|| ....||+|+|++|+|||+|+++.+..++ +++|+|++++... +.+.+++.. .+.+
T Consensus 8 ~~aIIlAaG~g~Rm----g~~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~-~~~~~~~~~------~v~~ 76 (231)
T 3q80_A 8 VVAIVPAAGSGERL----AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRT-DEARQILGH------RAMI 76 (231)
T ss_dssp EEEEEECCCCCTTT----CSSSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGH-HHHHHHHGG------GCEE
T ss_pred eEEEEECCCCCccC----CCCCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHH-HHHHHHhcC------CeEE
Confidence 57999999999999 6678999999999999999999999875 8999999986531 344444331 3444
Q ss_pred EEcCCCCCHHHHHHHHHHhcCC----CcEEEEeCC--cccCCChHHHHHHHHh
Q 018019 82 ATVPEDVGTAGALRAIAHHLTA----KDVLVVSGD--LVSDVPPGAVTAAHRR 128 (362)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~----~~~lv~~~D--~i~~~~l~~~l~~h~~ 128 (362)
+. ...+..++++.+++.+.. +.++++.|| ++....+..+++.+.+
T Consensus 77 v~--gg~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 77 VA--GGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp EE--CCSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred Ec--CCCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 43 334567899999888763 568899999 6777889999998876
No 48
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.53 E-value=7e-15 Score=130.99 Aligned_cols=119 Identities=20% Similarity=0.243 Sum_probs=89.9
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcce
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i 79 (362)
|++.+||||||.|+|| ....||+|+|++|+|||+|+++.+..++ +++|+|++++.. +.+.+ +..+ .. ..+
T Consensus 6 ~~~~~iIlA~G~g~R~----~~~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~-~~-~~v 76 (236)
T 1i52_A 6 LDVCAVVPAAGFGRRM----QTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGD--SRFAQ-LPLA-NH-PQI 76 (236)
T ss_dssp CCEEEEEEECCCCGGG----CCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTC--CSGGG-SGGG-GC-TTE
T ss_pred CceeEEEECCcCcccc----CCCCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccH--HHHHH-HHhc-CC-CCE
Confidence 5789999999999999 4458999999999999999999999887 899999998542 13333 2221 10 134
Q ss_pred EEEEcCCCCCHHHHHHHHHHhcC-CCcEEEEeCCc--ccCCChHHHHHHHHhcC
Q 018019 80 EVATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHD 130 (362)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~--i~~~~l~~~l~~h~~~~ 130 (362)
.++. ...|+.++++.+++.+. .+.++++.||. +....+..+++.+.+.+
T Consensus 77 ~~~~--~~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 77 TVVD--GGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp EEEE--CCSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred EEEC--CCCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 4443 33689999999988874 46799999994 45566888888876655
No 49
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.50 E-value=8.9e-14 Score=123.53 Aligned_cols=118 Identities=20% Similarity=0.239 Sum_probs=85.9
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCC-CCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
+.|||||||.|+|| ....||+|+|++|+|||+|+++.+..++ +++|+|++++... +.+.+++. .+..+
T Consensus 14 ~~aiILAaG~s~Rm----~~~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~-~~~~~~~~------~~~~~ 82 (234)
T 1vpa_A 14 NVAILLAAGKGERM----SENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWF-EVVEKRVF------HEKVL 82 (234)
T ss_dssp EEEEEEECCCCGGG----CCSSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGH-HHHHTTCC------CTTEE
T ss_pred CeEEEEcCcchhhc----CCCCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHH-HHHHHHhc------cCCce
Confidence 68999999999999 4457999999999999999999999998 8999999985431 12222221 11122
Q ss_pred EEcCCCCCHHHHHHHHHHhcC---CCcEEEEeCCc--ccCCChHHHHHHHHhcCC
Q 018019 82 ATVPEDVGTAGALRAIAHHLT---AKDVLVVSGDL--VSDVPPGAVTAAHRRHDA 131 (362)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~---~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a 131 (362)
.......+..++++.+++.+. .+.++++.||. +....+..+++.+.+.++
T Consensus 83 ~~~~gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~ 137 (234)
T 1vpa_A 83 GIVEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGA 137 (234)
T ss_dssp EEEECCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE
T ss_pred EEeCCCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 222233457788888877763 34577888994 666788999998876553
No 50
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.47 E-value=8.8e-14 Score=124.02 Aligned_cols=112 Identities=22% Similarity=0.263 Sum_probs=79.8
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceE
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~ 80 (362)
|++.|||||||.|+||. .. ||+|+|++|+|||+|+++. ..++++|+|+++. .. .+ +. ..++.
T Consensus 24 M~~~aiILAgG~s~Rm~----~~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~-~~----~~-~~-----~~~v~ 85 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLG----RG-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPP-GA----EP-PK-----GLGAV 85 (236)
T ss_dssp CCCEEEEECCC-----------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECT-TC----CC-CT-----TCSCE
T ss_pred CceEEEEEcCCCCccCC----CC-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCH-HH----HH-hh-----cCCcE
Confidence 56679999999999993 34 9999999999999999999 6789999999984 11 11 11 12454
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCe
Q 018019 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAV 132 (362)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~ 132 (362)
++. +..|..++++.++..+..+.+++++||. +....+..+++.+.+.++.
T Consensus 86 ~~~--~~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~ 137 (236)
T 2px7_A 86 FLE--GGATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSGAA 137 (236)
T ss_dssp EEE--CCSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHSEE
T ss_pred EEe--CCCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcCCe
Confidence 442 3457889999998888656689999994 5556789999988765543
No 51
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.45 E-value=7e-14 Score=121.57 Aligned_cols=103 Identities=23% Similarity=0.276 Sum_probs=80.8
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEE
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i 81 (362)
++.+||||||.|+|| . .||+|+|++|+|||+|+++.+..+ +++|+|++++... +++. ++.+
T Consensus 14 ~~~~iILA~G~g~Rm----g--~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~-----~~~~-------~~~~ 74 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRF----G--EDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK-----FSFL-------NAPV 74 (201)
T ss_dssp CCEEEEEEESSCCCC----S--TTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG-----GGGG-------TCCE
T ss_pred CceEEEECCCCCccC----C--CCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH-----hhcC-------CceE
Confidence 458999999999999 3 789999999999999999999988 9999999986431 1111 4555
Q ss_pred EEcC-CCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHH-HH
Q 018019 82 ATVP-EDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGA-VT 123 (362)
Q Consensus 82 ~~~~-~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~-~l 123 (362)
+..+ ...|++++++.+++.+..+.+++++||. +....+.. ++
T Consensus 75 v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 75 VLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 5533 4589999999999888667899999996 33444555 54
No 52
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.44 E-value=5.1e-13 Score=116.65 Aligned_cols=114 Identities=18% Similarity=0.276 Sum_probs=85.7
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeEEEEccCcchHHHHHHHHHhhhcCCcceEEE
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~ 82 (362)
|.|||||||.|+|| . .||+|+|++|+|||+|+++.+..+ +|+|+++.. +.+.. +.. ..++.++
T Consensus 1 m~aiILAgG~s~Rm----g--~~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~~---~~~~~-~~~----~~~~~~v 63 (208)
T 3ngw_A 1 MKVAVLVGGVGRRI----G--MEKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRDE---KQAEK-LSS----RYEAEFI 63 (208)
T ss_dssp CEEEEECCCCCTTT----T--SCGGGCEETTEEHHHHHHHHHTTS---EEEEECSSH---HHHHH-HHT----TSCSCEE
T ss_pred CEEEEECCCchhhC----C--CCCcccEECCeeHHHHHHHHhcCC---CEEEEECCH---HHHHH-HHH----hcCCeEE
Confidence 57999999999999 3 789999999999999999999876 899998742 23332 222 2345555
Q ss_pred EcC-CCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEE
Q 018019 83 TVP-EDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTA 135 (362)
Q Consensus 83 ~~~-~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~ 135 (362)
... ...|..++++.+++.+ .+.+ ++.||. +....+..+++.+.+.++++.+
T Consensus 64 ~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 64 WDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp CCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred ecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 432 2368889999998888 6667 999995 5566788888887765666544
No 53
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.44 E-value=1.9e-13 Score=129.27 Aligned_cols=114 Identities=18% Similarity=0.250 Sum_probs=89.5
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHh-CCCCeEEEEccCcchHHHHHHHHHhhhcCCcce
Q 018019 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (362)
Q Consensus 1 M~~~avIlA~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~-~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i 79 (362)
|++.+||||||.|+|| ....||+|+|++|+|||+|+++.+.. .++++|+|+++ . .+.+.+++. ++
T Consensus 2 mki~aIILAaG~ssRm----g~~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~--~~~i~~~~~-------~v 67 (371)
T 1w55_A 2 SEMSLIMLAAGNSTRF----NTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-N--ITYMKKFTK-------NY 67 (371)
T ss_dssp CCEEEEEECCSCCTTT----CSSSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-C--HHHHHTTCS-------SS
T ss_pred CccEEEEECCCCCccC----CCCCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-C--HHHHHHHhC-------CC
Confidence 5788999999999999 44679999999999999999999988 57999999998 3 233332221 24
Q ss_pred EEEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHHHHHhcC
Q 018019 80 EVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHD 130 (362)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~ 130 (362)
.++ ....|..++++.+++.+..+.++++.||. +....+..+++.+.+.+
T Consensus 68 ~~v--~~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~~ 118 (371)
T 1w55_A 68 EFI--EGGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKAD 118 (371)
T ss_dssp EEE--ECCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGCS
T ss_pred EEE--eCCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhcC
Confidence 454 33567889999998887667799999994 55667888988876654
No 54
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.37 E-value=4.6e-12 Score=123.42 Aligned_cols=195 Identities=14% Similarity=0.111 Sum_probs=124.6
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeC-CcchHHHHHHHHHhCCCC-----eEEEEccCcchHHHHHHHHH-h--h
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELSNIK-----DLIVVVEGADAALRVGGWIS-A--A 72 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~-g~plI~~~l~~l~~~gi~-----~v~vv~~~~~~~~~i~~~~~-~--~ 72 (362)
++.+||||||.|||| ....||+|+||+ |+|+|++.++++...|.. .++|.+... ..+.+.++++ + +
T Consensus 75 k~avViLAGGlGTRL----g~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~-t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 75 STVVLKLNGGLGTGM----GLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFN-TSASTKSFLKARYPW 149 (505)
T ss_dssp TEEEEEEECCCCGGG----TCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHH-HHHHHHHHHHHHCHH
T ss_pred cceEEEEcCCccccc----CCCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCC-CHHHHHHHHhhhhhc
Confidence 357899999999999 568999999999 999999999999887533 466665533 2467888887 3 3
Q ss_pred hc-CCcceEEEEc-----------------------CCCCCHHHHHHHH-----HHhc---CCCcEEEEeCCccc-CCCh
Q 018019 73 YV-DRLHVEVATV-----------------------PEDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVS-DVPP 119 (362)
Q Consensus 73 ~~-~~~~i~i~~~-----------------------~~~~gt~~al~~~-----~~~i---~~~~~lv~~~D~i~-~~~l 119 (362)
+. ++-.+.+..| ..+.|+|+.+... ++.+ ..++++|.++|.++ ..|+
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 31 1112221101 1245999988744 3332 25789999999877 4577
Q ss_pred HHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEc------CCCcE------EEEeecCcccccc
Q 018019 120 GAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD------PTKQF------LLHIATGAELEKD 187 (362)
Q Consensus 120 ~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d------~~~~~------l~~~~~~~~~ek~ 187 (362)
.++..|.++++++++.+.+... + ...+|++..+ .+|+. + .+.+-.
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~~--~--------------d~~~Gvl~~~~~~~~~~dg~~nvEyn~~-~llEys----- 286 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRTE--S--------------DKKGGHLARQTVYVKGKDGQPDAEKRVL-LLRESA----- 286 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECCT--T--------------CCSSEEEEEEEEEECCSSSCCCEEEEEE-EEEEGG-----
T ss_pred -HHHHHHHhcCCcEEEEEEEecC--C--------------ccceeEEEEecccccccCCccccccCce-eEEEec-----
Confidence 8999999999999998876542 1 2356777662 34550 1 122101
Q ss_pred cccchHHHhhcCceeeecCceeceEEeeCHHHHHHHHhc
Q 018019 188 TRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (362)
Q Consensus 188 ~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~ 226 (362)
.++....... .-.....+.++...+|+-+.+..+++.
T Consensus 287 -e~p~e~~~~~-~g~~~f~~~Ninn~~~~l~~l~~~~~~ 323 (505)
T 2oeg_A 287 -QCPKADMESF-QDINKYSFFNTNNLWIRLPVLLETMQE 323 (505)
T ss_dssp -GSCGGGHHHH-HCTTTTCEEEEEEEEEEHHHHHHHHHH
T ss_pred -cCChhhhhcc-cCccccCeeEEEEEEEEHHHHHHHHhh
Confidence 1222211110 000112446888889999988887764
No 55
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.24 E-value=1.6e-10 Score=112.76 Aligned_cols=192 Identities=11% Similarity=0.147 Sum_probs=121.9
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeeeC---CcchHHHHHHHHHhC--------C------CCeEEEEccCcchHHH
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLELS--------N------IKDLIVVVEGADAALR 64 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv~---g~plI~~~l~~l~~~--------g------i~~v~vv~~~~~~~~~ 64 (362)
++.+||||||.|||| +...||+|+||+ |+|+|++.++++... | +..+++...+. .+.
T Consensus 103 kvavvlLaGG~GTRL----g~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t--~~~ 176 (486)
T 2yqc_A 103 EVAVLLMAGGQGTRL----GSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPT--RNA 176 (486)
T ss_dssp CEEEEEEEESBCGGG----TCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGG--HHH
T ss_pred CeEEEEEcCCccccC----CCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCC--HHH
Confidence 478899999999999 788999999999 999999999999876 5 65555555543 457
Q ss_pred HHHHHHh--hhc-CCcceEEEEcC----------------------CCCCHHHHHHHHH-----Hhc---CCCcEEEEeC
Q 018019 65 VGGWISA--AYV-DRLHVEVATVP----------------------EDVGTAGALRAIA-----HHL---TAKDVLVVSG 111 (362)
Q Consensus 65 i~~~~~~--~~~-~~~~i~i~~~~----------------------~~~gt~~al~~~~-----~~i---~~~~~lv~~~ 111 (362)
+.+++++ ++. +...+.+..|+ .+.|+|+.+.... +.+ ..+++.+.+.
T Consensus 177 t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~v 256 (486)
T 2yqc_A 177 TESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCV 256 (486)
T ss_dssp HHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEET
T ss_pred HHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECC
Confidence 8888875 232 11123222211 2568888765442 222 2467888888
Q ss_pred Cc-cc-CCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcC-CCcE-EEEeecCcccccc
Q 018019 112 DL-VS-DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP-TKQF-LLHIATGAELEKD 187 (362)
Q Consensus 112 D~-i~-~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~-~~~~-l~~~~~~~~~ek~ 187 (362)
|. +. ..|. .++..|..+++++++.+.+... + ....|++.... +|+. ++.+.+ .
T Consensus 257 DN~l~~~~Dp-~~lg~~~~~~~~~~~~vv~k~~--~--------------~e~~Gvl~~~~~dg~~~vvEy~E-----~- 313 (486)
T 2yqc_A 257 DNCLVKVADP-IFIGFAIAKKFDLATKVVRKRD--A--------------NESVGLIVLDQDNQKPCVIEYSE-----I- 313 (486)
T ss_dssp TBTTCCTTCH-HHHHHHHHHTCSEEEEEEECCS--T--------------TCCCCEEEEETTTTEEEEECGGG-----S-
T ss_pred CCceeeccCH-HHHHHHHHcCCCEEEEEEEcCC--C--------------CCceeEEEEEecCCCEEEEEEec-----C-
Confidence 84 33 4554 4788899999999987765421 1 24567776542 4542 333322 1
Q ss_pred cccchHHHhh-cCc--eeeecCceeceEEeeCHHHHHHHHh
Q 018019 188 TRIRKSILRA-VGQ--MDIRADLMDAHMYAFNRSVLQEVLD 225 (362)
Q Consensus 188 ~~i~~~~l~~-~~~--~~~~~~l~~~giYi~s~~vl~~~~~ 225 (362)
+...... .+. -....+..++++|+|+.++|...+.
T Consensus 314 ---~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~ 351 (486)
T 2yqc_A 314 ---SQELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIP 351 (486)
T ss_dssp ---CHHHHHCEETTEEEEESSCEEEEEEEEEEHHHHHHHHH
T ss_pred ---CHHHhhcccccccccccccceeEEEEEEeHHHHHHHHH
Confidence 1111111 111 1233468899999999999987444
No 56
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.21 E-value=7.3e-10 Score=104.77 Aligned_cols=191 Identities=10% Similarity=0.151 Sum_probs=122.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCeeeeee---CCcchHHHHHHHHHh-------------CCCCeEEEEccCcchHHHH
Q 018019 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL-------------SNIKDLIVVVEGADAALRV 65 (362)
Q Consensus 2 ~~~avIlA~G~gtrl~pl~t~~~pK~llpv---~g~plI~~~l~~l~~-------------~gi~~v~vv~~~~~~~~~i 65 (362)
++.+|+||||.|||| +...||+|+|| .|+|++++.++.+.+ .++. .+|.++... .+.+
T Consensus 35 kvavvlLAGG~GTRL----G~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip-~~IMtS~~t-~e~t 108 (405)
T 3oc9_A 35 KTALITPAGGQGSRL----GFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIH-WFLMTNEET-IEEI 108 (405)
T ss_dssp CEEEEEECCSBCTTT----TCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCE-EEEEECTTT-HHHH
T ss_pred ceEEEEecCCCcccc----cCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCC-EEEEeCCcc-HHHH
Confidence 357899999999999 77899999999 899999999988853 4565 444444333 4688
Q ss_pred HHHHHh--hhc-CCcceEEEEc---------------------CCCCCHHHHHHHHH-----HhcC---CCcEEEEeCCc
Q 018019 66 GGWISA--AYV-DRLHVEVATV---------------------PEDVGTAGALRAIA-----HHLT---AKDVLVVSGDL 113 (362)
Q Consensus 66 ~~~~~~--~~~-~~~~i~i~~~---------------------~~~~gt~~al~~~~-----~~i~---~~~~lv~~~D~ 113 (362)
.+++++ ++. +...+.+..| ..+.|+|+.+.... +.+. .++++|.+.|.
T Consensus 109 ~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN 188 (405)
T 3oc9_A 109 NNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDN 188 (405)
T ss_dssp HHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTB
T ss_pred HHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCC
Confidence 888875 222 1112433221 12478887666432 2221 36788888897
Q ss_pred -ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcCCCc-EEEEeecCcccccccccc
Q 018019 114 -VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIR 191 (362)
Q Consensus 114 -i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-~l~~~~~~~~~ek~~~i~ 191 (362)
+.....-.++..|.++++++++-+.+... | .+..|++...+ |+ .++.+.+.+. +..
T Consensus 189 ~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~--~--------------dek~Gvl~~~d-g~~~vvEysei~~-e~e---- 246 (405)
T 3oc9_A 189 ILCKDVDPNMIGYMDLLQSEICIKIVKKGF--K--------------EEKVGVLVKEQ-ERIKVVEYTELTD-ELN---- 246 (405)
T ss_dssp TTCCSSCHHHHHHHHHTTCSEEEEEEECCS--T--------------TCSCCEEEEET-TEEEEECGGGCCT-TTT----
T ss_pred cccccCCHHHHHHHHHcCCCEEEEEEECCC--C--------------CCccceEEEEC-CeeEEEEEeeCCH-HHh----
Confidence 88788888999999999999988776431 1 24567776432 32 2233322111 100
Q ss_pred hHHHhhcCceeeecCceeceEEeeCHHHHHHHH
Q 018019 192 KSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (362)
Q Consensus 192 ~~~l~~~~~~~~~~~l~~~giYi~s~~vl~~~~ 224 (362)
.+.+.-....+..+.++++|+.++|..+.
T Consensus 247 ----~~~~~g~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 247 ----KQLSNGEFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp ----CBCTTSCBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ----hcCCCCceeeccceeEeeecCHHHHHHhh
Confidence 00111122346678899999999998875
No 57
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.78 E-value=2.7e-05 Score=67.48 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=75.2
Q ss_pred CceEEEEe--CCCCCCCCCCCCCCCCeeeeeeCCcchHHHHHHHHHhCCCCeE-EEEccCcchHHHHHHHHHhhhcCCcc
Q 018019 2 DFQVVVLA--GGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDL-IVVVEGADAALRVGGWISAAYVDRLH 78 (362)
Q Consensus 2 ~~~avIlA--~G~gtrl~pl~t~~~pK~llpv~g~plI~~~l~~l~~~gi~~v-~vv~~~~~~~~~i~~~~~~~~~~~~~ 78 (362)
.|.+||++ |...|||.+. .........++|||.|+++.+..++++.+ ++++++.. +. .+ .+
T Consensus 3 ~~~~vip~k~g~~KtRL~~~----l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~----~~----~~----~~ 66 (211)
T 2i5e_A 3 AMRAVIPYKKAGAKSRLSPV----LSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG----LE----EM----TE 66 (211)
T ss_dssp CCEEEEECCCTTTTGGGTTT----SCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT----CS----SC----CS
T ss_pred ceEEEEEeCCCCCccccCcc----CCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH----HH----hh----cC
Confidence 36799999 7677888432 22223335579999999999999999998 88887432 11 11 35
Q ss_pred eEEEEcCCCCCHHHHHHHHHHhcCCCcEEEEeCCc--ccCCChHHHHH
Q 018019 79 VEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTA 124 (362)
Q Consensus 79 i~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~ 124 (362)
+.++.++ .|.+++++.+.+.+ .+.++++.||+ +....+..+++
T Consensus 67 ~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 67 ARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 6676655 88899999998776 57899999994 66666777765
No 58
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=97.51 E-value=0.0029 Score=61.49 Aligned_cols=191 Identities=13% Similarity=0.116 Sum_probs=107.0
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeC-CcchHHHHHHHHHhC----CC-CeEEEEccCcchHHHHHHHHHhhhcCC
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NI-KDLIVVVEGADAALRVGGWISAAYVDR 76 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~-g~plI~~~l~~l~~~----gi-~~v~vv~~~~~~~~~i~~~~~~~~~~~ 76 (362)
+.+|+||||.|||| +...||.++||. |+++++..++++... |. -..+|.++... .+...++++++..-.
T Consensus 128 vavvlLaGGlGTRL----G~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T-~~~T~~~f~k~~~fg 202 (528)
T 3r3i_A 128 LVVVKLNGGLGTSM----GCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNT-DEDTKKILQKYNHCR 202 (528)
T ss_dssp EEEEEECCCBCTTT----TCSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHSSCGGGTTSS
T ss_pred eEEEEeCCCCcccc----CCCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccch-hHHHHHHHHhcCccC
Confidence 56789999999999 788999999997 789999999998764 42 24566666443 356777776531101
Q ss_pred cceEEEEc----------------------C-----CCCCHHH---HHHHH--HHhcC---CCcEEEEeCCcc-cCCChH
Q 018019 77 LHVEVATV----------------------P-----EDVGTAG---ALRAI--AHHLT---AKDVLVVSGDLV-SDVPPG 120 (362)
Q Consensus 77 ~~i~i~~~----------------------~-----~~~gt~~---al~~~--~~~i~---~~~~lv~~~D~i-~~~~l~ 120 (362)
..+.+..| + .+.|.|+ +|+.. ++.+. .+++.+.+.|.+ ...|..
T Consensus 203 ~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vDp~ 282 (528)
T 3r3i_A 203 VKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLY 282 (528)
T ss_dssp CCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCCHH
T ss_pred CCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccCHH
Confidence 12222211 0 1234433 33321 23332 467888889953 344544
Q ss_pred HHHHHHHhc----CCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcCCCcE-EEEeecCcccccccccchHHH
Q 018019 121 AVTAAHRRH----DAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQF-LLHIATGAELEKDTRIRKSIL 195 (362)
Q Consensus 121 ~~l~~h~~~----~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~-l~~~~~~~~~ek~~~i~~~~l 195 (362)
++..+..+ ++++.+-+.+.. .| .+.-|++... +|+. ++.+.+ ++....
T Consensus 283 -~Lg~~~~~~~~~~~d~~~kVv~Kt--~~--------------dek~Gvl~~~-dGk~~vvEyse---------ip~e~~ 335 (528)
T 3r3i_A 283 -ILNHLMNPPNGKRCEFVMEVTNKT--RA--------------DVKGGTLTQY-EGKLRLVEIAQ---------VPKAHV 335 (528)
T ss_dssp -HHHHHSSCSSSCCCSEEEEECCCC--TT--------------CCSSCEEECS-SSSCEEECTTS---------SCGGGT
T ss_pred -HHHHHHhcccccCCcEEEEEeEcc--cc--------------CCcccEEEEE-CCeEEEEEecC---------CChhHh
Confidence 56666665 777766544321 11 1222444432 3432 222221 111111
Q ss_pred hhcCceeeecCceeceEEeeCHHHHHHHHhc
Q 018019 196 RAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (362)
Q Consensus 196 ~~~~~~~~~~~l~~~giYi~s~~vl~~~~~~ 226 (362)
..... .....+.++...+|+-+.|..+++.
T Consensus 336 ~~~~g-~~~f~~~Ntnnlw~~L~~L~~v~~~ 365 (528)
T 3r3i_A 336 DEFKS-VSKFKIFNTNNLWISLAAVKRLQEQ 365 (528)
T ss_dssp TTSSC-SSSCCCCEEEEEEEEHHHHHHHHHT
T ss_pred hccCC-cccCCeEEEEEEEEEHHHHHHHHHh
Confidence 11111 1223567888999999999888764
No 59
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=97.18 E-value=0.016 Score=55.80 Aligned_cols=133 Identities=15% Similarity=0.120 Sum_probs=84.0
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeee-CCcchHHHHHHHHHhC----CC-CeEEEEccCcchHHHHHHHHHh--hhc
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPV-ANRPVLSYVLEQLELS----NI-KDLIVVVEGADAALRVGGWISA--AYV 74 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv-~g~plI~~~l~~l~~~----gi-~~v~vv~~~~~~~~~i~~~~~~--~~~ 74 (362)
+.+|+||||.|||| +...||.++|+ .|+.+++..++++... |. --.+|.++... .+...+++++ ++.
T Consensus 77 vavvlLaGGlGTRL----G~~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T-~~~T~~~~~k~~~Fg 151 (484)
T 3gue_A 77 AVVLKLNGGLGTGM----GLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFST-SGETKNFLRKYPTLY 151 (484)
T ss_dssp EEEEEEECCCCGGG----TCSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHHHGGGCHHHH
T ss_pred cEEEEEcCCccccc----CCCCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcch-hHHHHHHHHhCcccC
Confidence 45788999999999 78899999999 6789999998888652 32 24566666543 3577777764 221
Q ss_pred -CCcceEEEEc-----------------C------CCCCHHH---HHHHH--HHhcC---CCcEEEEeCCcccCCChHHH
Q 018019 75 -DRLHVEVATV-----------------P------EDVGTAG---ALRAI--AHHLT---AKDVLVVSGDLVSDVPPGAV 122 (362)
Q Consensus 75 -~~~~i~i~~~-----------------~------~~~gt~~---al~~~--~~~i~---~~~~lv~~~D~i~~~~l~~~ 122 (362)
....+.+..| . .+.|.|+ +|+.. ++.+. .+++.+.+.|.+...-=-.+
T Consensus 152 l~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~ 231 (484)
T 3gue_A 152 EVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRL 231 (484)
T ss_dssp TTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHH
T ss_pred CCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHH
Confidence 1111111111 0 0345554 33221 23222 46788889997544322447
Q ss_pred HHHHHhcCCeEEEEEeee
Q 018019 123 TAAHRRHDAVVTAMICSV 140 (362)
Q Consensus 123 l~~h~~~~a~~t~l~~~~ 140 (362)
+..+..+++++.+-+.+.
T Consensus 232 lG~~~~~~~d~~~kvv~K 249 (484)
T 3gue_A 232 LDYMHEKQLGFLMEVCRR 249 (484)
T ss_dssp HHHHHHTTCSEEEEEEEC
T ss_pred HHHHHhcCCCEEEEEEEC
Confidence 888888999988876654
No 60
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.00 E-value=0.0024 Score=63.12 Aligned_cols=132 Identities=14% Similarity=0.154 Sum_probs=84.3
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCeeeeeeC---CcchHHHHHHHHHhC-CC-CeEEEEccCcchHHHHHHHHHhhhcCCc
Q 018019 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLELS-NI-KDLIVVVEGADAALRVGGWISAAYVDRL 77 (362)
Q Consensus 3 ~~avIlA~G~gtrl~pl~t~~~pK~llpv~---g~plI~~~l~~l~~~-gi-~~v~vv~~~~~~~~~i~~~~~~~~~~~~ 77 (362)
+.+|+||||.|||| ....||.++|++ |++++++.++++.+. |. --.+|.++... .+...++++++-.++.
T Consensus 115 vavvllaGGlGTRL----G~~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T-~~~T~~~~~~fgl~~~ 189 (630)
T 3ogz_A 115 TVFVLVAGGLGERL----GYSSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDT-HDRTLQLLRELQLEVP 189 (630)
T ss_dssp EEEEEECCCEEGGG----TEEEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTT-HHHHHHHHHHTTCCCT
T ss_pred ceEEEecCCccccc----CCCCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccc-hHHHHHHHHHhCCCcc
Confidence 45788999999999 888999999997 899999999999653 43 24566666543 3578888887322222
Q ss_pred ceEEEEcC-----------------C-----CCCHHH---HHHH--------------------HHHhc---CCCcEEEE
Q 018019 78 HVEVATVP-----------------E-----DVGTAG---ALRA--------------------IAHHL---TAKDVLVV 109 (362)
Q Consensus 78 ~i~i~~~~-----------------~-----~~gt~~---al~~--------------------~~~~i---~~~~~lv~ 109 (362)
.+.+..|. . +.|.|+ +|+. .++.+ ..+++.+.
T Consensus 190 ~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~ 269 (630)
T 3ogz_A 190 NLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFI 269 (630)
T ss_dssp TEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEEE
T ss_pred cEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEE
Confidence 33333210 0 244444 2221 22222 13677888
Q ss_pred eCCccc-CCChHHHHHHHHhcCCeEEEEEee
Q 018019 110 SGDLVS-DVPPGAVTAAHRRHDAVVTAMICS 139 (362)
Q Consensus 110 ~~D~i~-~~~l~~~l~~h~~~~a~~t~l~~~ 139 (362)
+.|.+. ...--.++..+..+++++.+-+.+
T Consensus 270 ~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~ 300 (630)
T 3ogz_A 270 QDTNAGATITIPISLALSAEHSLDMNFTCIP 300 (630)
T ss_dssp CTTBTTHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred ccCCccccccCHHHhHHHHhcCCCEEEEEEE
Confidence 888632 222223678888889998877655
No 61
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=95.08 E-value=0.00027 Score=66.78 Aligned_cols=74 Identities=12% Similarity=0.048 Sum_probs=41.5
Q ss_pred EEEEeCCcccCC--ChHHHHHHHHhcCCeEEEEEeeeccCCCcccCCCCCccCCCCCCcceEEEEcCCC-cEEEEeecCc
Q 018019 106 VLVVSGDLVSDV--PPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTK-QFLLHIATGA 182 (362)
Q Consensus 106 ~lv~~~D~i~~~--~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~-~~l~~~~~~~ 182 (362)
=|+-.+|.++.+ +|.++++.|. +|+.. .+ ++..+++..+++.+ ..+ .|.+
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g--~~-----------------~~~~~Gv~~ld~a~~g~I-~F~e-- 65 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK-----VEFQG--NG-----------------ATLLSGVEEIEEAKTAHI-TFLD-- 65 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT-----CEEES--CT-----------------TCEECEECCTTTCCTTEE-EECC--
T ss_pred CcccCccccccCcCcHHHHHHhhC-----CEEEC--CC-----------------cceEEEEeccccCCCCeE-EEEe--
Confidence 467779999987 8999999885 24432 11 24567888887532 344 5553
Q ss_pred ccccccccchHHHhhcCceeeecCceeceEEeeCHHHHH
Q 018019 183 ELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQ 221 (362)
Q Consensus 183 ~~ek~~~i~~~~l~~~~~~~~~~~l~~~giYi~s~~vl~ 221 (362)
|+... ....+.++|+|+|+++++.
T Consensus 66 ---kPk~~------------~~~~~~~aGiyI~~~~~l~ 89 (374)
T 2iu8_A 66 ---NEKYA------------KHLKSSEAGAIIISRTQFQ 89 (374)
T ss_dssp ---SSSTH------------HHHHTCCCSEEEEEHHHHH
T ss_pred ---Cchhh------------hhhhcCCcEEEEeChhHhh
Confidence 32210 0125678999999999874
No 62
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=93.31 E-value=1.1 Score=38.58 Aligned_cols=99 Identities=8% Similarity=0.038 Sum_probs=67.4
Q ss_pred eeeeCCc-chHHHHHHHHHhCCCC--eEEEEccCcchHHHHHHHHHhhhcCCcceEEEEcC--------CCCCHHHHHHH
Q 018019 28 LLPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVP--------EDVGTAGALRA 96 (362)
Q Consensus 28 llpv~g~-plI~~~l~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~~~~--------~~~gt~~al~~ 96 (362)
.+|.-|+ ..|..+|+.+.+.... +|+|+-.... +...+.+.++.. ...+.++..+ ...|.+.+.-.
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~--d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~N~ 82 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSN--EETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALINQ 82 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCC--HHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCC--chHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHHHH
Confidence 4566665 7899999999876543 5666654332 344555554422 3467777666 56788888888
Q ss_pred HHHhcCCCcEEEEeCCcccC-CChHHHHHHHHhc
Q 018019 97 IAHHLTAKDVLVVSGDLVSD-VPPGAVTAAHRRH 129 (362)
Q Consensus 97 ~~~~i~~~~~lv~~~D~i~~-~~l~~~l~~h~~~ 129 (362)
+.+....+.++++.+|.+.. .-+..+++.+.+.
T Consensus 83 gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 83 AIEMAEGEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 88887777889999996544 4478888877654
No 63
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=93.08 E-value=0.61 Score=39.82 Aligned_cols=106 Identities=11% Similarity=0.070 Sum_probs=67.2
Q ss_pred eeeeeCCc-chHHHHHHHHHhCCCC--eEEEEccCcchHHHHHHHHHhhhcCCcceEEEEcCCCCCHHHHHHHHHHhcCC
Q 018019 27 ALLPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTA 103 (362)
Q Consensus 27 ~llpv~g~-plI~~~l~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~~~~~~~gt~~al~~~~~~i~~ 103 (362)
-.+|.-|+ ..|..+|+.+.+.... +|+|+-+... +...+.++++......+.++. .+..|.+.+.-.+++....
T Consensus 9 ViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~--d~t~~~~~~~~~~~~~i~~i~-~~n~G~~~a~N~g~~~a~g 85 (240)
T 3bcv_A 9 VIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESP--DNCPKICDDYAAQYPNIKVIH-KKNAGLGMACNSGLDVATG 85 (240)
T ss_dssp EEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCS--SSHHHHHHHHHHHCSSEEEEE-CCCCCHHHHHHHHHHHCCS
T ss_pred EEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCC--cCHHHHHHHHHhhCCCEEEEE-CCCCChHHHHHHHHHHcCC
Confidence 34676665 7999999999876543 5666644221 122222322211112466665 4568999999888888877
Q ss_pred CcEEEEeCCcccCC-ChHHHHHHHHhcCCeEEE
Q 018019 104 KDVLVVSGDLVSDV-PPGAVTAAHRRHDAVVTA 135 (362)
Q Consensus 104 ~~~lv~~~D~i~~~-~l~~~l~~h~~~~a~~t~ 135 (362)
++++++.+|.+... -+..+++...+.+.++.+
T Consensus 86 ~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 86 EYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp SEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred CEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 78899999965544 478888877766666543
No 64
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=90.03 E-value=0.83 Score=39.86 Aligned_cols=87 Identities=13% Similarity=0.105 Sum_probs=58.2
Q ss_pred cchHHHHHHHHHhCCCCeEEEEccCcchHHHH--HHHHHhhhcCCcceEEEEcCCCCCHHHHHHHHHHhc---CCCcEEE
Q 018019 34 RPVLSYVLEQLELSNIKDLIVVVEGADAALRV--GGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL---TAKDVLV 108 (362)
Q Consensus 34 ~plI~~~l~~l~~~gi~~v~vv~~~~~~~~~i--~~~~~~~~~~~~~i~i~~~~~~~gt~~al~~~~~~i---~~~~~lv 108 (362)
++|+.++++.+..++...++++++.... ..+ ..+. . .++.+.. ....|.+.+|+.+...+ ..+.+++
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~-~~~~~~~~~----~--~~~~~~~-q~~~gLg~rl~~a~~~~~~~~~~~vli 108 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDAD-LPEKFKAWL----G--PQHMFAA-QQGLDLGERMKHAMQKAFDDGYDRVVL 108 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTT-HHHHHHHHH----C--TTSEEEE-CCSSSHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchh-hhhhhhhhc----c--CCcEEec-CCCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 6899999999999888767666654321 111 2222 1 2343333 34578889998887654 2357999
Q ss_pred EeCC--cccCCChHHHHHHHHh
Q 018019 109 VSGD--LVSDVPPGAVTAAHRR 128 (362)
Q Consensus 109 ~~~D--~i~~~~l~~~l~~h~~ 128 (362)
+.+| .+...++..+++....
T Consensus 109 igaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 109 MGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp ECSSCTTCCHHHHHHHHHHTTT
T ss_pred EcCCCCCCCHHHHHHHHHHhcc
Confidence 9999 4777888888876543
No 65
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=89.92 E-value=3.4 Score=39.44 Aligned_cols=103 Identities=10% Similarity=0.085 Sum_probs=68.7
Q ss_pred eeeeCCc--chHHHHHHHHHhCCC----CeEEEEccCcc---hHHHHHHHHHhhhcCCcceEEEEcCCCCCHHHHHHHHH
Q 018019 28 LLPVANR--PVLSYVLEQLELSNI----KDLIVVVEGAD---AALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIA 98 (362)
Q Consensus 28 llpv~g~--plI~~~l~~l~~~gi----~~v~vv~~~~~---~~~~i~~~~~~~~~~~~~i~i~~~~~~~gt~~al~~~~ 98 (362)
.+|.-|. ..|..+|+.+.+... .+|+||-.... ..+.+.++.... ...+.++..+...|-+.+...++
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~---~~~v~vi~~~~n~G~~~a~N~g~ 110 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL---KVPVHVIRMEQRSGLIRARLKGA 110 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS---SSCEEEEECSSCCCHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHC---CCcEEEEECCCCCChHHHHHHHH
Confidence 4677775 588899999977643 26777754322 112233333211 11477777777789999998888
Q ss_pred HhcCCCcEEEEeCCccc-CCChHHHHHHHHhcCCeE
Q 018019 99 HHLTAKDVLVVSGDLVS-DVPPGAVTAAHRRHDAVV 133 (362)
Q Consensus 99 ~~i~~~~~lv~~~D~i~-~~~l~~~l~~h~~~~a~~ 133 (362)
+....+.++++.+|.+. +.-+..+++...+....+
T Consensus 111 ~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 111 AVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp HHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred HhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 88777788999999644 555888888887655443
No 66
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=86.80 E-value=3.9 Score=40.28 Aligned_cols=103 Identities=10% Similarity=0.001 Sum_probs=66.6
Q ss_pred eeeeCCc--chHHHHHHHHHhCCC-C---eEEEEccCcchHHHHHHHHHhhhcCCcceEEEEcCCCCCHHHHHHHHHHhc
Q 018019 28 LLPVANR--PVLSYVLEQLELSNI-K---DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL 101 (362)
Q Consensus 28 llpv~g~--plI~~~l~~l~~~gi-~---~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~~~~~~~gt~~al~~~~~~i 101 (362)
.+|+-|. ..|..+|+.+.+... . +|+||-..... ..+.+.++++......+.++..+...|-+.+...+++..
T Consensus 117 IIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D-~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N~G~~~A 195 (570)
T 2d7i_A 117 IIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDR-EHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVA 195 (570)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCC-GGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHHHHHHHC
T ss_pred EEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCc-HHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 3677776 488888888866433 2 67777543211 121233332211113577777677789999998888887
Q ss_pred CCCcEEEEeCCccc-CCChHHHHHHHHhcCC
Q 018019 102 TAKDVLVVSGDLVS-DVPPGAVTAAHRRHDA 131 (362)
Q Consensus 102 ~~~~~lv~~~D~i~-~~~l~~~l~~h~~~~a 131 (362)
..+.++++.+|.+. +.-|..+++...+...
T Consensus 196 ~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 196 TGDVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp CSSEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred CCCEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 76778899999644 4558888888766543
No 67
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=85.18 E-value=11 Score=37.36 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=63.1
Q ss_pred eeeeCCc-chHHHHHHHHHhCCCC--eEEEEccCcchHHHHHHHHHhhhcCCcceEEEEcCCCCCHHHHHHHHHHhcCCC
Q 018019 28 LLPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTAK 104 (362)
Q Consensus 28 llpv~g~-plI~~~l~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~~~~~~~gt~~al~~~~~~i~~~ 104 (362)
++|.-|. ..|..+|+++.+.... +|+|+-+... +...+.+.++......+.++. ....|.+.++..+++....+
T Consensus 380 ii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~--d~t~~~~~~~~~~~~~i~~~~-~~n~G~~~a~n~g~~~a~g~ 456 (625)
T 2z86_A 380 YIPAYNCSKYIVRCVESALNQTITDLEVCICDDGST--DDTLRILQEHYANHPRVRFIS-QKNKGIGSASNTAVRLCRGF 456 (625)
T ss_dssp EEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCS--SSHHHHHHHHHTTCTTEEEEE-ECCCCHHHHHHHHHHHCCSS
T ss_pred EEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCC--hhHHHHHHHHHhhCCcEEEEe-CCCCCHHHHHHHHHHhcCCC
Confidence 4566665 8999999999776433 5666644221 122333433221223466664 45689999998888887667
Q ss_pred cEEEEeCCcccC-CChHHHHHHHHhc
Q 018019 105 DVLVVSGDLVSD-VPPGAVTAAHRRH 129 (362)
Q Consensus 105 ~~lv~~~D~i~~-~~l~~~l~~h~~~ 129 (362)
.++++.+|.+.. .-+..+++.+.+.
T Consensus 457 ~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 457 YIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp EEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred EEEEECCCcccChhHHHHHHHHHHhC
Confidence 888999996544 4477787776543
No 68
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=81.41 E-value=7.5 Score=37.38 Aligned_cols=100 Identities=11% Similarity=0.029 Sum_probs=67.6
Q ss_pred eeeeCCc-c-hHHHHHHHHHhCCCC----eEEEEccCcchHHHHHHHHHhhhcCCcceEEEEcCCCCCHHHHHHHHHHhc
Q 018019 28 LLPVANR-P-VLSYVLEQLELSNIK----DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL 101 (362)
Q Consensus 28 llpv~g~-p-lI~~~l~~l~~~gi~----~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~~~~~~~gt~~al~~~~~~i 101 (362)
.+|+-|. . .|..+|+.+.+.... +|+||-.... .+.+...+.. ...+.++..+...|-+.|...+++..
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~-D~t~~~~~~~----~~~v~vi~~~~n~G~~~A~N~G~~~A 145 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSN-DPEDGALLGK----IEKVRVLRNDRREGLMRSRVRGADAA 145 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCS-CTHHHHGGGG----BTTEEEEECSSCCHHHHHHHHHHHHC
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCC-chHHHHHHhc----CCCEEEEECCCCcCHHHHHHHHHHhc
Confidence 4677786 4 799999988664332 6777754322 1233333322 23577776667789889998888888
Q ss_pred CCCcEEEEeCCc-ccCCChHHHHHHHHhcCCe
Q 018019 102 TAKDVLVVSGDL-VSDVPPGAVTAAHRRHDAV 132 (362)
Q Consensus 102 ~~~~~lv~~~D~-i~~~~l~~~l~~h~~~~a~ 132 (362)
..+.++++.+|. +.+.-|..+++...+....
T Consensus 146 ~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 146 QAKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp CSSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred CCCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 767788899995 4455689999888776554
No 69
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=76.75 E-value=29 Score=34.10 Aligned_cols=103 Identities=14% Similarity=0.121 Sum_probs=67.1
Q ss_pred eeeeeCCc-chHHHHHHHHHhCC---CCeEEEEccCcchHHHHHHHHHhhhcCCcceEEEEcCC-CCCHHHHHHHHHHhc
Q 018019 27 ALLPVANR-PVLSYVLEQLELSN---IKDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPE-DVGTAGALRAIAHHL 101 (362)
Q Consensus 27 ~llpv~g~-plI~~~l~~l~~~g---i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~~~~~-~~gt~~al~~~~~~i 101 (362)
-++|.-|+ ..|..+|+.+.... --+|+|+-+... +...+.+..+ ....++.++..+. ..|-+.++-.+++..
T Consensus 97 viIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~--d~t~~~~~~~-~~~~~i~~i~~~~~~~g~~~a~N~g~~~a 173 (625)
T 2z86_A 97 IVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSK--ENIEEIVREF-ESLLNIKYVRQKDYGYQLCAVRNLGLRAA 173 (625)
T ss_dssp EEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCS--SCHHHHHHTT-TTTSCEEEEEECCCSCCHHHHHHHHHHHC
T ss_pred EEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCc--hhHHHHHHHh-hhcCCeEEEEeCCCCcchhHHHHHHHHhC
Confidence 34677777 78999999998763 346777655332 2334445443 2224566665543 346888888888877
Q ss_pred CCCcEEEEeCCcccCCC-hHHHHHHHHhcCCe
Q 018019 102 TAKDVLVVSGDLVSDVP-PGAVTAAHRRHDAV 132 (362)
Q Consensus 102 ~~~~~lv~~~D~i~~~~-l~~~l~~h~~~~a~ 132 (362)
..+.++++.+|.+...+ +..+++.+.+....
T Consensus 174 ~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 174 KYNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp CSSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 66778999999655544 77788777665443
No 70
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=76.14 E-value=0.92 Score=39.31 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=22.0
Q ss_pred eeEEEEEecCCce-EEEeCCHHHHHHHhHHHhh
Q 018019 300 HKCCVYIASNSKY-CVRLNSIQAFMDINRDVIG 331 (362)
Q Consensus 300 ~~~~~~~~~~~~y-~~rin~~~~Y~~~n~~~l~ 331 (362)
.++|+|.. .+| .....++.+|++.|+.+|.
T Consensus 39 ~~~~~~~~--~~~~~g~w~di~~~l~~n~~~l~ 69 (240)
T 3r8y_A 39 VQAFVNKK--SGVLFGEWSEIKTILDENSKYIV 69 (240)
T ss_dssp SEEEECSS--EEEEEEEHHHHHHHHHHTTTTEE
T ss_pred ceEEEcCC--CeEEEccHHHHHHHHHhccceec
Confidence 56666644 667 4557778889999998885
No 71
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=68.49 E-value=38 Score=30.28 Aligned_cols=105 Identities=18% Similarity=0.180 Sum_probs=63.5
Q ss_pred eeeeCCc-chHHHHHHHHHhCC---CCeEEEEccCcchHHHHHHHHHhhhcCCc--ceEEEE-cCCCCCHHHHHHHHHHh
Q 018019 28 LLPVANR-PVLSYVLEQLELSN---IKDLIVVVEGADAALRVGGWISAAYVDRL--HVEVAT-VPEDVGTAGALRAIAHH 100 (362)
Q Consensus 28 llpv~g~-plI~~~l~~l~~~g---i~~v~vv~~~~~~~~~i~~~~~~~~~~~~--~i~i~~-~~~~~gt~~al~~~~~~ 100 (362)
.+|.-|. ..|..+|+.+.+.. ..+|+|+-+... +...+.+.++. .+. .+.++. .....|-+.++..+++.
T Consensus 53 iIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~--D~t~~~~~~~~-~~~~~~~~~~~~~~~n~G~~~a~n~g~~~ 129 (329)
T 3ckj_A 53 VLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGST--DDTEIRAVAAG-ARVVSREQALPEVPIRPGKGEALWRSLAA 129 (329)
T ss_dssp EEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCC--SSHHHHHHHTT-CEEEEHHHHCTTSCCCCSHHHHHHHHHHH
T ss_pred EEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCC--chHHHHHHHhh-hhhccceeeeccCCCCCCHHHHHHHHHHh
Confidence 3677775 78999999997652 257777754321 22334444321 100 011111 24558999999988888
Q ss_pred cCCCcEEEEeCCcc-c-CCChHHHHHHHHh-cCCeEEE
Q 018019 101 LTAKDVLVVSGDLV-S-DVPPGAVTAAHRR-HDAVVTA 135 (362)
Q Consensus 101 i~~~~~lv~~~D~i-~-~~~l~~~l~~h~~-~~a~~t~ 135 (362)
...+.++++.+|.+ . +..+..+++...+ .+.++..
T Consensus 130 a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~ 167 (329)
T 3ckj_A 130 SRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVK 167 (329)
T ss_dssp CCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEE
T ss_pred CCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEE
Confidence 77677889999976 4 4557888877544 3444433
No 72
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=61.36 E-value=42 Score=31.04 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=65.1
Q ss_pred eeeeeCCc-chHHHHHHHHHh----CC-CCeEEEEccCcchHHHHHHHHHhhhcCCcceEEEE-------cCCCCCHHHH
Q 018019 27 ALLPVANR-PVLSYVLEQLEL----SN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEVAT-------VPEDVGTAGA 93 (362)
Q Consensus 27 ~llpv~g~-plI~~~l~~l~~----~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~i~i~~-------~~~~~gt~~a 93 (362)
-.+|.-|. ..|..+|+.+.. .+ ..+|+||-+... +...+.+.++ ...++. .+...|-+.+
T Consensus 98 VVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgSt--D~T~~i~~~~-----~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 98 AVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSE--DGTAGVAASH-----GAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp EEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCS--SSHHHHHHHT-----TCEEEEGGGTTGGGCSCCSHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCC--ccHHHHHHHh-----CchhcccceeEecCCccCCHHHH
Confidence 35677775 677777777754 32 457777755321 2233344432 122222 2346899999
Q ss_pred HHHHHHhcCCCcEEEEeCCcc--cCCChHHHHHHHHhc-CCeEEEEEe
Q 018019 94 LRAIAHHLTAKDVLVVSGDLV--SDVPPGAVTAAHRRH-DAVVTAMIC 138 (362)
Q Consensus 94 l~~~~~~i~~~~~lv~~~D~i--~~~~l~~~l~~h~~~-~a~~t~l~~ 138 (362)
+..+.+....+.++++.+|.. .+..+..+++...+. ++++.....
T Consensus 171 ~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 171 MWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp HHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred HHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 999988776677888899976 455678888877654 566655443
No 73
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=58.79 E-value=61 Score=33.17 Aligned_cols=99 Identities=20% Similarity=0.215 Sum_probs=62.6
Q ss_pred eeeeCCcc--hHHHHHHHHHhCCCC----eEEEEccCcchHHHH--------------HHHHHhhhcCCcceEEEEcCCC
Q 018019 28 LLPVANRP--VLSYVLEQLELSNIK----DLIVVVEGADAALRV--------------GGWISAAYVDRLHVEVATVPED 87 (362)
Q Consensus 28 llpv~g~p--lI~~~l~~l~~~gi~----~v~vv~~~~~~~~~i--------------~~~~~~~~~~~~~i~i~~~~~~ 87 (362)
++|.-|.+ ++..+|+++.+.... +|+|+.+.... +.. ...++... .+.++.++..++.
T Consensus 145 iIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD-~T~~~~d~~i~~~~~~~~~~l~~~~-~~~~v~~i~~~~~ 222 (802)
T 4hg6_A 145 LVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTD-QRCMSPDPELAQKAQERRRELQQLC-RELGVVYSTRERN 222 (802)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHH-HHHTCSSHHHHHHHHHHHHHHHHHH-HHHTCEEEECSSC
T ss_pred EEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCc-cccccCCHHHHHHHHhhhHHHHHHH-HhcCcEEEEecCC
Confidence 57887764 569999999776432 57777664321 110 11121111 1235666655443
Q ss_pred -CCHHHHHHHHHHhcCCCcEEEEeCCcccCCC-hHHHHHHHHh
Q 018019 88 -VGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR 128 (362)
Q Consensus 88 -~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-l~~~l~~h~~ 128 (362)
.|-++++..+.+....+.++++.+|.+.+.+ +..++..+.+
T Consensus 223 ~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~ 265 (802)
T 4hg6_A 223 EHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVE 265 (802)
T ss_dssp CSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhc
Confidence 6778899888888877788999999755544 7888887744
No 74
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=56.56 E-value=36 Score=34.02 Aligned_cols=98 Identities=18% Similarity=0.220 Sum_probs=60.0
Q ss_pred eeeCCc-chHHHHHHHHHhC-----CCCeEEEEccCcch---HHHHHHHHHhhhcCCcceEEEEcCCCCCHHHHHHHHHH
Q 018019 29 LPVANR-PVLSYVLEQLELS-----NIKDLIVVVEGADA---ALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (362)
Q Consensus 29 lpv~g~-plI~~~l~~l~~~-----gi~~v~vv~~~~~~---~~~i~~~~~~~~~~~~~i~i~~~~~~~gt~~al~~~~~ 99 (362)
+|.-|+ ..|...|+.+.+. ...+|+||=+.... ...+.+.+.... ..+.++..+ ..|-+.+.-.++.
T Consensus 186 IptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~---~~I~vI~~~-N~G~a~a~N~Gl~ 261 (657)
T 4fix_A 186 IPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG---SRLSIHDQP-NLGGSGGYSRVMY 261 (657)
T ss_dssp CCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG---GGEEEEECC-CCHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC---CCEEEEECC-CCCHHHHHHHHHH
Confidence 455565 7899999999764 23367776543211 113444444321 257677655 6777776665554
Q ss_pred hc----CCCcEEEEeCCcccCC-ChHHHHHHHHhcC
Q 018019 100 HL----TAKDVLVVSGDLVSDV-PPGAVTAAHRRHD 130 (362)
Q Consensus 100 ~i----~~~~~lv~~~D~i~~~-~l~~~l~~h~~~~ 130 (362)
.. ..+++++++.|.+... -+..+++.+....
T Consensus 262 ~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~ 297 (657)
T 4fix_A 262 EALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAK 297 (657)
T ss_dssp HHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBS
T ss_pred HHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCC
Confidence 43 3467899999975544 4788888776653
No 75
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=43.17 E-value=8.8 Score=31.84 Aligned_cols=26 Identities=15% Similarity=0.272 Sum_probs=17.2
Q ss_pred CCCCCCCCCCccCCCceecccccccC
Q 018019 337 SGYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 337 ~~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
....+.+.+++|.|+++||++|.|+|
T Consensus 136 G~~v~IG~~~~I~~gv~IG~~~vIga 161 (195)
T 3nz2_A 136 EDDVWIGGNVVINQGVTIGARSVVAA 161 (195)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCCCEEcCCCEECCCCEECCCCEECC
Confidence 33455556677777777777777765
No 76
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=41.16 E-value=5.6 Score=40.35 Aligned_cols=97 Identities=14% Similarity=0.179 Sum_probs=0.0
Q ss_pred eeeCCc-chHHHHHHHHHhCCCC--eEEEEccCcchHHHHHHHHHhhhcC-CcceEEEEcCCCCCHHHHHHHHHHhcCCC
Q 018019 29 LPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVD-RLHVEVATVPEDVGTAGALRAIAHHLTAK 104 (362)
Q Consensus 29 lpv~g~-plI~~~l~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~-~~~i~i~~~~~~~gt~~al~~~~~~i~~~ 104 (362)
+|.-|+ ..|..+|+++.+.... +|+||-... .+...+.+.++... ...+.++..+...|.+.+.-.+++....+
T Consensus 8 Ip~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgS--tD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~gd 85 (729)
T 3l7i_A 8 VTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGS--TDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVETP 85 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCC--CCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccCC
Confidence 455554 6777788887665433 455554322 12333334332111 12455655555678888887777776667
Q ss_pred cEEEEeCCc-ccCCChHHHHHHHH
Q 018019 105 DVLVVSGDL-VSDVPPGAVTAAHR 127 (362)
Q Consensus 105 ~~lv~~~D~-i~~~~l~~~l~~h~ 127 (362)
.++++.+|- +.+.-+..+++...
T Consensus 86 yI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 86 YFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp ------------------------
T ss_pred EEEEECCCCCCChhHHHHHHHHhc
Confidence 788999995 44445777777665
No 77
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=40.79 E-value=10 Score=31.27 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=17.5
Q ss_pred cCCCCCCCCCCccCCCceecccccccC
Q 018019 336 LSGYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 336 ~~~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
+....+.+.+++|.|+++||+++.|+|
T Consensus 135 IG~~v~IG~~~~I~~gv~IG~~~vIga 161 (188)
T 3srt_A 135 IGDNVWIGGGVIITPGITIGDNVVIGA 161 (188)
T ss_dssp ECSSCEECTTCEECTTCEECSSEEECT
T ss_pred ECCCcEEcCCCEECCCcEECCCCEECC
Confidence 334455556667777777777777765
No 78
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=39.68 E-value=11 Score=31.09 Aligned_cols=26 Identities=15% Similarity=0.337 Sum_probs=16.5
Q ss_pred CCCCCCCCCCccCCCceecccccccC
Q 018019 337 SGYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 337 ~~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
....+.+.+++|.|+++||+++.|+|
T Consensus 138 G~~v~IG~~~~I~~gv~IG~~~vIga 163 (190)
T 3hjj_A 138 GNNVWVGGGAIINPGVSIGDNAVIAS 163 (190)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCCCEECCCCEECCCCEECCCCEECC
Confidence 33445556666777777777777665
No 79
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=39.04 E-value=11 Score=31.59 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=15.2
Q ss_pred CCCCCCCCCccCCCceecccccccC
Q 018019 338 GYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
...+.+.+++|.++|+||+++.|+|
T Consensus 136 d~v~IG~~a~I~~gv~IG~~~vIga 160 (203)
T 1krr_A 136 NNVWIGSHVVINPGVTIGDNSVIGA 160 (203)
T ss_dssp TTCEECTTCEECTTCEECTTCEECT
T ss_pred CCeEECCCCEEeCCeEECCCCEECC
Confidence 3344555666666666666666665
No 80
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=38.69 E-value=10 Score=31.55 Aligned_cols=26 Identities=12% Similarity=0.178 Sum_probs=16.7
Q ss_pred CCCCCCCCCCccCCCceecccccccC
Q 018019 337 SGYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 337 ~~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
....+.+.+++|.++|+||++|+|+|
T Consensus 134 G~~v~IG~~~~I~~gv~IG~~~vIga 159 (199)
T 3ftt_A 134 GSNTWFGGHVAVLPGVTIGEGSVIGA 159 (199)
T ss_dssp CSSEEECTTCEECTTCEECTTCEECT
T ss_pred cCCcEEcCCCEECCCCEECCCCEECC
Confidence 33445556667777777777777765
No 81
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=37.92 E-value=12 Score=30.71 Aligned_cols=25 Identities=12% Similarity=0.315 Sum_probs=14.8
Q ss_pred CCCCCCCCCccCCCceecccccccC
Q 018019 338 GYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
...+...+++|.++|+||+++.|+|
T Consensus 133 ~~v~Ig~~a~I~~gv~IG~~~vIga 157 (182)
T 1ocx_A 133 NNVWIGGRAVINPGVTIGDNVVVAS 157 (182)
T ss_dssp TTCEECTTCEECTTCEECTTCEECT
T ss_pred CCeEECCCCEECCCcEECCCCEECC
Confidence 3344555666666666666666654
No 82
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=37.84 E-value=12 Score=30.78 Aligned_cols=25 Identities=12% Similarity=0.294 Sum_probs=14.8
Q ss_pred CCCCCCCCCccCCCceecccccccC
Q 018019 338 GYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
...+.+.+++|.++|+||+++.|+|
T Consensus 135 d~v~IG~~~~I~~gv~IG~~~vIga 159 (185)
T 2p2o_A 135 HNVWIGGRAVINPGVTIGDNAVIAS 159 (185)
T ss_dssp SSCEECTTCEECTTCEECTTCEECT
T ss_pred CCeEECCCCEECCCCEECCCCEECC
Confidence 3444555566666666666666654
No 83
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=36.19 E-value=88 Score=26.94 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=20.9
Q ss_pred CcchHHHHHHHHHhCCCCeEEEEcc
Q 018019 33 NRPVLSYVLEQLELSNIKDLIVVVE 57 (362)
Q Consensus 33 g~plI~~~l~~l~~~gi~~v~vv~~ 57 (362)
+.|-|.-+|+.|...|+++|+|+.-
T Consensus 63 ~~P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 63 AAPSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEec
Confidence 6788999999998889999888754
No 84
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=34.03 E-value=15 Score=30.82 Aligned_cols=26 Identities=12% Similarity=0.226 Sum_probs=16.7
Q ss_pred CCCCCCCCCCccCCCceecccccccC
Q 018019 337 SGYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 337 ~~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
....+.+.++.|.++|+||++|.|+|
T Consensus 115 G~~v~IG~~a~I~~gv~IG~~~iIga 140 (212)
T 3eev_A 115 GHDVWIGTEAMIMPGVKIGHGAIIAS 140 (212)
T ss_dssp CSSCEECTTCEECTTCEECTTCEECT
T ss_pred CCCCEECCCCEEcCCCEECCCCEECC
Confidence 33455556666777777777777765
No 85
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=32.91 E-value=16 Score=30.86 Aligned_cols=25 Identities=16% Similarity=0.251 Sum_probs=15.7
Q ss_pred CCCCCCCCCccCCCceecccccccC
Q 018019 338 GYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
.....+.+++|.++|+||++|.|+|
T Consensus 124 ~~v~IG~~a~I~~gv~IG~gavIga 148 (220)
T 4hur_A 124 NDVWIGRDVTIMPGVKIGDGAIIAA 148 (220)
T ss_dssp SSCEECTTCEECTTCEECTTCEECT
T ss_pred CCcEECCCCEEeCCCEECCCCEEcC
Confidence 3445556666666777777776665
No 86
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=30.36 E-value=18 Score=29.66 Aligned_cols=22 Identities=14% Similarity=-0.052 Sum_probs=11.3
Q ss_pred CCCCCCccCCCceecccccccC
Q 018019 341 FSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 341 ~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
+...++.|+++|+||++|.|+|
T Consensus 110 ~Ig~~~~I~~gv~IG~~~~Iga 131 (194)
T 3tv0_A 110 VIESKAYVGRNVILTSGCIIGA 131 (194)
T ss_dssp EECTTCEECTTEEECSSCEECT
T ss_pred eecceeeECCeEEECCCCEECC
Confidence 3334455555555555555554
No 87
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=29.64 E-value=20 Score=30.28 Aligned_cols=25 Identities=8% Similarity=0.125 Sum_probs=16.3
Q ss_pred CCCCCCCCCccCCCceecccccccC
Q 018019 338 GYNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
...+.+.++.|.++|+||+++.|+|
T Consensus 115 ~~v~IG~~a~I~~gv~Ig~~~~Iga 139 (212)
T 1xat_A 115 HEVWIGTEAMFMPGVRVGHGAIIGS 139 (212)
T ss_dssp TTCEECTTCEECTTCEECTTCEECT
T ss_pred CCCEECCCCEEeCCCEECCCCEECC
Confidence 3455556666777777777777765
No 88
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=25.89 E-value=25 Score=29.02 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=13.4
Q ss_pred CCCCCCCCccCCCceecccccccC
Q 018019 339 YNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
....+.++.|.++++||++|.|+|
T Consensus 140 ~v~IG~~~~I~~gv~Ig~~~~Ig~ 163 (205)
T 3vbi_A 140 HVIIGAHSIIFPNVVIGEGVAVGA 163 (205)
T ss_dssp TCEECTTCEECSSCEECTTCEECT
T ss_pred CCEECCCCEEcCCCEECCCCEEcC
Confidence 344445555666666666666554
No 89
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=25.84 E-value=7.5 Score=35.48 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=19.7
Q ss_pred eEEEeCCHHHHHHHhHHHhhhhc
Q 018019 312 YCVRLNSIQAFMDINRDVIGEAN 334 (362)
Q Consensus 312 y~~rin~~~~Y~~~n~~~l~~~~ 334 (362)
-..||.++++|-.+..+.|..|.
T Consensus 25 ~l~ri~al~~f~~v~~g~lgg~i 47 (334)
T 2pig_A 25 LLRQVIAVTDFNDVKAGTSGGWV 47 (334)
T ss_dssp EEEEEEESSCBTTBCTTCEEEEE
T ss_pred EEEEEEEeeccccccCCccCCeE
Confidence 47999999999999999998663
No 90
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=25.46 E-value=70 Score=26.06 Aligned_cols=18 Identities=6% Similarity=0.108 Sum_probs=10.4
Q ss_pred EEeCCHHHHHHHhHHHhh
Q 018019 314 VRLNSIQAFMDINRDVIG 331 (362)
Q Consensus 314 ~rin~~~~Y~~~n~~~l~ 331 (362)
.-+.+...+++.-..+++
T Consensus 52 iaig~~~~r~~~~~~l~~ 69 (194)
T 3bfp_A 52 IAIGNNEIRKKIYQKISE 69 (194)
T ss_dssp ECCCCHHHHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHHHHH
Confidence 344466666666666654
No 91
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=23.72 E-value=25 Score=30.28 Aligned_cols=24 Identities=21% Similarity=0.214 Sum_probs=13.9
Q ss_pred CCCCCCCCccCCCceecccccccC
Q 018019 339 YNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
..+.+.++.|.++|+||++|.|+|
T Consensus 169 ~v~IG~~a~I~~gv~IG~~~~Iga 192 (252)
T 3jqy_B 169 YVWVGRNVSIMKGVSVGSGSVIGY 192 (252)
T ss_dssp SCEECSSEEECTTCEECTTCEECT
T ss_pred CcEECCCCEECCCCEECCCCEECC
Confidence 344555556666666666666654
No 92
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=23.26 E-value=30 Score=28.10 Aligned_cols=24 Identities=17% Similarity=-0.056 Sum_probs=15.5
Q ss_pred CCCCCCCCccCCCceecccccccC
Q 018019 339 YNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
..+...++.|.++++||+++.|+|
T Consensus 108 ~v~IG~~~~I~~g~~Ig~~~~Iga 131 (192)
T 3mqg_A 108 GATLGANCTVVCGATIGRYAFVGA 131 (192)
T ss_dssp TCEECTTCEECTTCEECTTCEECT
T ss_pred CcEECCCCEECCCCEECCCCEEcC
Confidence 344556666777777777777664
No 93
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=22.99 E-value=2.3e+02 Score=22.80 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=20.9
Q ss_pred eEEEEcCCCCCHHHHHHHHHHhcC--CCcEEEEeCCcccCC
Q 018019 79 VEVATVPEDVGTAGALRAIAHHLT--AKDVLVVSGDLVSDV 117 (362)
Q Consensus 79 i~i~~~~~~~gt~~al~~~~~~i~--~~~~lv~~~D~i~~~ 117 (362)
+.+....+..+...++....+.+. +.+++++.||++...
T Consensus 6 mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~ 46 (228)
T 1uf3_A 6 RYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKA 46 (228)
T ss_dssp CEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTT
T ss_pred EEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCC
Confidence 334444444444444444444333 457888888876544
No 94
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=21.91 E-value=3.5e+02 Score=22.54 Aligned_cols=41 Identities=10% Similarity=-0.042 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHhcCCCcEEEEeCCcccCCC-hHHHHHHHHh
Q 018019 88 VGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR 128 (362)
Q Consensus 88 ~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-l~~~l~~h~~ 128 (362)
.|.+.+.-.+++....+++++++.|.+.+.+ +..+++...+
T Consensus 60 ~g~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 60 FHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCTTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 4566677677776666889999999655544 7777776654
No 95
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=21.06 E-value=36 Score=28.51 Aligned_cols=24 Identities=17% Similarity=0.313 Sum_probs=13.6
Q ss_pred CCCCCCCCccCCCceecccccccC
Q 018019 339 YNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
..+.+.++.|.++++||+++.|+|
T Consensus 119 ~v~IG~~a~I~~gv~Ig~~~~Iga 142 (209)
T 1mr7_A 119 DVWIGKDVVIMPGVKIGDGAIVAA 142 (209)
T ss_dssp SCEECTTCEECTTCEECTTCEECT
T ss_pred CCEEcCCCEEcCCCEECCCCEEcC
Confidence 344445555666666666666654
No 96
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=20.94 E-value=36 Score=28.36 Aligned_cols=24 Identities=8% Similarity=-0.036 Sum_probs=14.7
Q ss_pred CCCCCCCCccCCCceecccccccC
Q 018019 339 YNFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
..+...++.|.++|+||+++.|+|
T Consensus 143 ~v~IG~~~~I~~gv~Ig~~~vIga 166 (215)
T 2wlg_A 143 HVWLGRNVTILKGVCIPNNVVVGS 166 (215)
T ss_dssp TCEECTTCEECTTCEECSSCEECT
T ss_pred CcEECCCCEECCCCEECCCCEECC
Confidence 344455666666666666666664
No 97
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=20.53 E-value=37 Score=28.69 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=12.9
Q ss_pred CCCCCCCccCCCceecccccccC
Q 018019 340 NFSAQNNIIHPSAELGSKTTQLA 362 (362)
Q Consensus 340 ~~~~~~~~i~~~~~i~~k~~i~~ 362 (362)
.+.+.++.|.++++||+++.|+|
T Consensus 125 v~IG~~a~I~~gv~IG~~~~Iga 147 (219)
T 4e8l_A 125 VWIGRDVTIMPGVKIGDGAIIAA 147 (219)
T ss_dssp CEECTTCEECTTCEECTTCEECT
T ss_pred eEECCCCEEcCCCEECCCCEECC
Confidence 44445555555666666666554
Done!