Query 018020
Match_columns 362
No_of_seqs 139 out of 1945
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 08:38:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4had_A Probable oxidoreductase 100.0 7.3E-62 2.5E-66 456.3 33.4 329 6-360 21-350 (350)
2 4gqa_A NAD binding oxidoreduct 100.0 6.6E-61 2.3E-65 459.2 37.0 344 6-361 24-410 (412)
3 4h3v_A Oxidoreductase domain p 100.0 1.2E-60 4.2E-65 454.1 35.5 340 5-361 3-389 (390)
4 4fb5_A Probable oxidoreductase 100.0 4.4E-59 1.5E-63 443.9 33.4 343 5-360 22-392 (393)
5 3db2_A Putative NADPH-dependen 100.0 9.3E-58 3.2E-62 428.9 36.0 339 7-361 4-350 (354)
6 1ydw_A AX110P-like protein; st 100.0 1E-57 3.5E-62 429.9 34.3 353 5-361 3-360 (362)
7 3q2i_A Dehydrogenase; rossmann 100.0 4E-57 1.4E-61 424.6 35.5 337 5-361 10-351 (354)
8 3v5n_A Oxidoreductase; structu 100.0 4.5E-57 1.6E-61 432.4 36.5 351 2-360 31-417 (417)
9 1zh8_A Oxidoreductase; TM0312, 100.0 5.3E-57 1.8E-61 421.2 34.1 320 4-361 14-337 (340)
10 3rc1_A Sugar 3-ketoreductase; 100.0 3.9E-57 1.3E-61 423.6 32.8 323 5-354 24-347 (350)
11 3fhl_A Putative oxidoreductase 100.0 1.2E-57 4E-62 429.3 27.8 336 6-362 3-355 (362)
12 3e9m_A Oxidoreductase, GFO/IDH 100.0 2E-56 6.9E-61 415.7 35.2 325 7-362 4-329 (330)
13 3dty_A Oxidoreductase, GFO/IDH 100.0 4.4E-56 1.5E-60 423.6 36.6 349 5-362 9-391 (398)
14 3e18_A Oxidoreductase; dehydro 100.0 3.1E-56 1.1E-60 418.9 34.7 338 6-361 3-351 (359)
15 3kux_A Putative oxidoreductase 100.0 7.3E-56 2.5E-60 415.6 35.9 334 5-361 4-349 (352)
16 3evn_A Oxidoreductase, GFO/IDH 100.0 2.1E-56 7E-61 415.6 30.0 320 7-357 4-324 (329)
17 3gdo_A Uncharacterized oxidore 100.0 5.3E-56 1.8E-60 417.3 32.9 333 7-362 4-350 (358)
18 3e82_A Putative oxidoreductase 100.0 5.2E-56 1.8E-60 418.1 32.8 338 1-362 1-347 (364)
19 3ec7_A Putative dehydrogenase; 100.0 3.9E-55 1.3E-59 411.1 36.0 323 6-362 21-349 (357)
20 3oqb_A Oxidoreductase; structu 100.0 1.6E-55 5.5E-60 418.0 31.9 342 5-361 3-380 (383)
21 3mz0_A Inositol 2-dehydrogenas 100.0 1.3E-54 4.4E-59 406.0 35.9 320 8-361 2-328 (344)
22 3ohs_X Trans-1,2-dihydrobenzen 100.0 1.1E-54 3.8E-59 404.8 35.3 323 8-354 2-328 (334)
23 1h6d_A Precursor form of gluco 100.0 1.1E-54 3.8E-59 417.4 33.5 339 5-361 80-424 (433)
24 3ezy_A Dehydrogenase; structur 100.0 2E-54 6.8E-59 404.7 33.7 325 8-361 2-332 (344)
25 3i23_A Oxidoreductase, GFO/IDH 100.0 1E-55 3.5E-60 414.1 24.9 334 8-357 2-344 (349)
26 3u3x_A Oxidoreductase; structu 100.0 6E-55 2.1E-59 410.2 28.9 324 5-354 23-357 (361)
27 2glx_A 1,5-anhydro-D-fructose 100.0 1.7E-53 5.7E-58 396.7 38.0 326 9-361 1-329 (332)
28 3euw_A MYO-inositol dehydrogen 100.0 2.6E-54 9E-59 404.0 32.5 325 7-362 3-334 (344)
29 3ip3_A Oxidoreductase, putativ 100.0 1.6E-55 5.5E-60 410.9 23.7 316 8-362 2-331 (337)
30 4hkt_A Inositol 2-dehydrogenas 100.0 9.6E-54 3.3E-58 398.1 34.7 323 8-361 3-331 (331)
31 3m2t_A Probable dehydrogenase; 100.0 9E-55 3.1E-59 408.9 26.6 327 6-359 3-337 (359)
32 2nvw_A Galactose/lactose metab 100.0 1.3E-52 4.4E-57 406.9 36.9 352 5-361 36-475 (479)
33 3btv_A Galactose/lactose metab 100.0 1.8E-52 6.2E-57 402.8 36.7 349 6-361 18-431 (438)
34 2p2s_A Putative oxidoreductase 100.0 1.3E-52 4.6E-57 391.2 30.0 324 6-354 2-335 (336)
35 3f4l_A Putative oxidoreductase 100.0 2.4E-53 8.3E-58 397.4 23.7 325 8-357 2-341 (345)
36 3cea_A MYO-inositol 2-dehydrog 100.0 5.6E-52 1.9E-56 388.6 30.8 334 1-361 2-345 (346)
37 3moi_A Probable dehydrogenase; 100.0 1.2E-52 4E-57 398.5 25.4 342 8-359 2-386 (387)
38 3uuw_A Putative oxidoreductase 100.0 2.4E-49 8.3E-54 364.8 31.5 304 5-352 3-308 (308)
39 2ho3_A Oxidoreductase, GFO/IDH 100.0 6.8E-49 2.3E-53 364.5 31.9 315 8-354 1-320 (325)
40 2ixa_A Alpha-N-acetylgalactosa 100.0 1E-50 3.5E-55 391.6 18.6 348 5-361 17-424 (444)
41 3oa2_A WBPB; oxidoreductase, s 100.0 6.8E-50 2.3E-54 369.2 17.0 289 8-352 3-301 (318)
42 3c1a_A Putative oxidoreductase 100.0 1.5E-47 5.1E-52 353.9 28.5 311 1-347 2-314 (315)
43 1xea_A Oxidoreductase, GFO/IDH 100.0 3.1E-47 1.1E-51 353.0 25.0 307 8-357 2-311 (323)
44 1tlt_A Putative oxidoreductase 100.0 1.6E-46 5.5E-51 347.6 27.6 302 6-354 3-309 (319)
45 4ew6_A D-galactose-1-dehydroge 100.0 8.9E-47 3E-51 350.3 25.6 281 3-329 20-304 (330)
46 3o9z_A Lipopolysaccaride biosy 100.0 6.9E-48 2.4E-52 354.9 15.4 291 7-354 2-301 (312)
47 1lc0_A Biliverdin reductase A; 100.0 7.3E-41 2.5E-45 305.6 21.6 286 1-354 1-293 (294)
48 4gmf_A Yersiniabactin biosynth 100.0 5.3E-32 1.8E-36 253.3 25.6 220 7-266 6-241 (372)
49 3bio_A Oxidoreductase, GFO/IDH 99.9 2.5E-30 8.5E-35 236.7 -3.0 142 6-159 7-149 (304)
50 3mtj_A Homoserine dehydrogenas 99.9 7.7E-24 2.6E-28 200.8 12.8 146 5-158 7-163 (444)
51 3upl_A Oxidoreductase; rossman 99.9 2.6E-21 8.8E-26 182.7 12.3 129 6-135 21-169 (446)
52 3do5_A HOM, homoserine dehydro 99.8 7E-22 2.4E-26 181.2 6.9 145 8-159 2-169 (327)
53 1f06_A MESO-diaminopimelate D- 99.8 2.1E-20 7.2E-25 172.0 9.3 128 7-146 2-130 (320)
54 3c8m_A Homoserine dehydrogenas 99.8 1.6E-20 5.4E-25 173.1 7.7 145 6-158 4-174 (331)
55 1ebf_A Homoserine dehydrogenas 99.8 2.1E-19 7.3E-24 166.8 4.7 146 6-162 2-172 (358)
56 2ejw_A HDH, homoserine dehydro 99.8 2.3E-19 7.7E-24 164.6 4.0 136 7-158 2-148 (332)
57 3ing_A Homoserine dehydrogenas 99.7 4.7E-18 1.6E-22 155.5 11.3 150 6-163 2-172 (325)
58 1nvm_B Acetaldehyde dehydrogen 99.7 2.2E-20 7.6E-25 170.5 -4.7 99 7-108 3-108 (312)
59 1r0k_A 1-deoxy-D-xylulose 5-ph 99.7 1.3E-16 4.3E-21 147.8 18.6 213 8-240 4-259 (388)
60 3a06_A 1-deoxy-D-xylulose 5-ph 99.7 4.7E-17 1.6E-21 147.7 14.7 208 8-240 3-247 (376)
61 2dc1_A L-aspartate dehydrogena 99.7 3.3E-17 1.1E-21 144.3 8.9 110 9-133 1-111 (236)
62 2czc_A Glyceraldehyde-3-phosph 99.7 2.4E-17 8.3E-22 152.3 7.5 147 8-159 2-169 (334)
63 1dih_A Dihydrodipicolinate red 99.6 3.1E-16 1.1E-20 140.4 4.1 150 7-162 4-160 (273)
64 2nu8_A Succinyl-COA ligase [AD 99.5 4.3E-15 1.5E-19 134.1 4.6 118 6-133 5-123 (288)
65 4f3y_A DHPR, dihydrodipicolina 99.5 4.8E-14 1.6E-18 125.6 6.3 149 6-161 5-160 (272)
66 2dt5_A AT-rich DNA-binding pro 99.4 3.2E-14 1.1E-18 122.0 1.3 101 7-113 79-181 (211)
67 3ijp_A DHPR, dihydrodipicolina 99.4 5E-13 1.7E-17 119.4 8.7 150 5-161 18-175 (288)
68 1ff9_A Saccharopine reductase; 99.4 2.7E-13 9.2E-18 130.0 6.8 149 8-164 3-157 (450)
69 3qy9_A DHPR, dihydrodipicolina 99.3 1.1E-12 3.9E-17 114.8 6.0 102 8-126 3-104 (243)
70 2z2v_A Hypothetical protein PH 99.3 2E-12 6.9E-17 120.6 8.0 143 7-163 15-160 (365)
71 2vt3_A REX, redox-sensing tran 99.3 6.1E-13 2.1E-17 114.2 0.6 101 7-113 84-186 (215)
72 1p9l_A Dihydrodipicolinate red 99.3 1.5E-10 5.1E-15 101.5 15.7 130 9-162 1-133 (245)
73 4ina_A Saccharopine dehydrogen 99.2 3.1E-11 1.1E-15 114.3 11.2 152 9-162 2-169 (405)
74 2ahr_A Putative pyrroline carb 99.2 3.8E-11 1.3E-15 106.9 9.9 100 8-117 3-102 (259)
75 1cf2_P Protein (glyceraldehyde 99.1 1.3E-10 4.4E-15 107.0 9.9 97 8-106 1-111 (337)
76 2axq_A Saccharopine dehydrogen 99.1 8.9E-10 3E-14 105.8 14.1 150 7-165 22-178 (467)
77 1u8f_O GAPDH, glyceraldehyde-3 99.1 2.8E-10 9.6E-15 104.6 9.7 98 8-105 3-124 (335)
78 3abi_A Putative uncharacterize 99.1 4.3E-11 1.5E-15 112.0 3.6 143 7-163 15-160 (365)
79 3e5r_O PP38, glyceraldehyde-3- 99.1 2.3E-10 7.7E-15 105.0 8.2 99 8-106 3-127 (337)
80 1b7g_O Protein (glyceraldehyde 99.0 1.1E-09 3.8E-14 100.9 10.7 90 8-103 1-107 (340)
81 2yv1_A Succinyl-COA ligase [AD 99.0 1.6E-09 5.5E-14 97.8 9.3 114 6-128 11-125 (294)
82 1oi7_A Succinyl-COA synthetase 98.9 2.3E-09 7.8E-14 96.5 9.0 114 6-128 5-119 (288)
83 1y81_A Conserved hypothetical 98.9 1.7E-09 6E-14 86.3 7.2 106 6-129 12-121 (138)
84 3ic5_A Putative saccharopine d 98.9 4E-08 1.4E-12 75.7 12.6 109 8-123 5-116 (118)
85 2yv2_A Succinyl-COA synthetase 98.9 1.2E-08 4E-13 92.3 10.8 113 6-128 11-126 (297)
86 3cky_A 2-hydroxymethyl glutara 98.8 2.6E-08 9E-13 90.3 11.8 111 7-128 3-120 (301)
87 3l6d_A Putative oxidoreductase 98.8 3.8E-08 1.3E-12 89.6 12.7 119 1-130 1-125 (306)
88 2d59_A Hypothetical protein PH 98.8 5.1E-09 1.7E-13 84.3 5.6 103 8-128 22-128 (144)
89 3pef_A 6-phosphogluconate dehy 98.8 3.4E-08 1.2E-12 89.0 11.7 109 9-128 2-117 (287)
90 4e21_A 6-phosphogluconate dehy 98.8 9.1E-08 3.1E-12 88.8 14.4 114 6-128 20-137 (358)
91 3obb_A Probable 3-hydroxyisobu 98.8 6.9E-08 2.4E-12 87.4 13.3 110 9-129 4-120 (300)
92 4dll_A 2-hydroxy-3-oxopropiona 98.8 6E-08 2E-12 88.8 12.6 112 7-129 30-147 (320)
93 2duw_A Putative COA-binding pr 98.8 3.2E-09 1.1E-13 85.6 3.5 114 8-138 13-132 (145)
94 2h78_A Hibadh, 3-hydroxyisobut 98.8 6.1E-08 2.1E-12 88.0 12.4 110 8-128 3-119 (302)
95 2yyy_A Glyceraldehyde-3-phosph 98.8 1.2E-08 4.1E-13 93.8 7.7 97 8-106 2-115 (343)
96 2ep5_A 350AA long hypothetical 98.7 1.3E-08 4.6E-13 94.2 7.7 92 7-102 3-106 (350)
97 3d1l_A Putative NADP oxidoredu 98.7 2E-08 6.9E-13 89.4 8.5 81 8-95 10-90 (266)
98 1omo_A Alanine dehydrogenase; 98.7 8.6E-09 2.9E-13 94.4 5.8 99 7-112 124-225 (322)
99 3tri_A Pyrroline-5-carboxylate 98.7 8E-08 2.7E-12 86.3 11.9 79 8-94 3-84 (280)
100 3g0o_A 3-hydroxyisobutyrate de 98.7 7.1E-08 2.4E-12 87.6 11.4 116 1-128 1-124 (303)
101 3doj_A AT3G25530, dehydrogenas 98.7 7.5E-08 2.6E-12 87.8 11.1 112 6-128 19-137 (310)
102 1x7d_A Ornithine cyclodeaminas 98.7 4.6E-09 1.6E-13 97.1 3.0 118 7-130 128-248 (350)
103 2gf2_A Hibadh, 3-hydroxyisobut 98.7 5.9E-08 2E-12 87.8 10.1 108 9-127 1-115 (296)
104 2i99_A MU-crystallin homolog; 98.7 7.8E-09 2.7E-13 94.4 4.2 113 7-128 134-247 (312)
105 3oj0_A Glutr, glutamyl-tRNA re 98.7 8.6E-09 3E-13 83.0 3.6 87 8-101 21-107 (144)
106 3qsg_A NAD-binding phosphogluc 98.7 2.8E-07 9.5E-12 84.1 14.0 113 7-129 23-142 (312)
107 4gbj_A 6-phosphogluconate dehy 98.7 8.8E-08 3E-12 86.7 10.4 111 9-130 6-121 (297)
108 3qha_A Putative oxidoreductase 98.7 1.7E-07 5.7E-12 84.9 11.7 110 8-128 15-127 (296)
109 4huj_A Uncharacterized protein 98.7 2.7E-08 9.3E-13 86.1 6.1 94 6-106 21-116 (220)
110 1j5p_A Aspartate dehydrogenase 98.6 1.6E-08 5.5E-13 88.2 4.4 129 8-161 12-141 (253)
111 3keo_A Redox-sensing transcrip 98.6 1.5E-08 5E-13 86.3 4.1 101 7-110 83-186 (212)
112 1vpd_A Tartronate semialdehyde 98.6 2.3E-07 7.7E-12 84.0 12.0 110 8-128 5-121 (299)
113 3b1f_A Putative prephenate deh 98.6 2.5E-07 8.4E-12 83.4 11.3 119 6-131 4-126 (290)
114 1bg6_A N-(1-D-carboxylethyl)-L 98.6 2.3E-07 7.8E-12 86.2 11.5 93 7-103 3-108 (359)
115 2iz1_A 6-phosphogluconate dehy 98.6 4E-07 1.4E-11 87.8 13.2 116 8-128 5-125 (474)
116 2fp4_A Succinyl-COA ligase [GD 98.6 4.5E-08 1.6E-12 88.6 6.1 112 8-128 13-127 (305)
117 3gt0_A Pyrroline-5-carboxylate 98.6 1.7E-07 5.7E-12 82.6 9.4 98 8-113 2-105 (247)
118 4gwg_A 6-phosphogluconate dehy 98.6 9.1E-07 3.1E-11 85.0 14.9 118 7-128 3-125 (484)
119 1iuk_A Hypothetical protein TT 98.6 3.3E-08 1.1E-12 79.1 4.1 114 7-138 12-132 (140)
120 1ys4_A Aspartate-semialdehyde 98.6 6.8E-08 2.3E-12 89.6 6.8 101 1-102 1-112 (354)
121 1yb4_A Tartronic semialdehyde 98.6 8E-08 2.7E-12 86.8 7.1 109 8-128 3-118 (295)
122 2d5c_A AROE, shikimate 5-dehyd 98.6 3.9E-08 1.3E-12 87.5 4.8 110 10-133 118-231 (263)
123 1i36_A Conserved hypothetical 98.5 6.4E-07 2.2E-11 79.5 12.2 104 9-124 1-106 (264)
124 3pdu_A 3-hydroxyisobutyrate de 98.5 2.2E-07 7.6E-12 83.6 9.0 110 9-129 2-118 (287)
125 2ozp_A N-acetyl-gamma-glutamyl 98.5 7.1E-08 2.4E-12 89.0 5.6 91 7-102 3-97 (345)
126 2cvz_A Dehydrogenase, 3-hydrox 98.5 2.8E-07 9.4E-12 83.0 8.0 107 9-128 2-112 (289)
127 2zyd_A 6-phosphogluconate dehy 98.5 2.8E-06 9.5E-11 81.9 15.0 118 6-128 13-135 (480)
128 2uyy_A N-PAC protein; long-cha 98.5 7.7E-07 2.6E-11 81.2 10.7 111 8-129 30-147 (316)
129 2i76_A Hypothetical protein; N 98.4 4.3E-08 1.5E-12 87.8 1.9 77 8-93 2-78 (276)
130 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.4 2.3E-06 7.9E-11 82.5 14.1 116 9-128 2-125 (478)
131 2pgd_A 6-phosphogluconate dehy 98.4 3.6E-06 1.2E-10 81.3 14.1 113 8-128 2-123 (482)
132 1xyg_A Putative N-acetyl-gamma 98.4 1.9E-07 6.4E-12 86.6 4.9 92 6-102 14-110 (359)
133 4ezb_A Uncharacterized conserv 98.4 3.1E-06 1.1E-10 77.3 12.9 110 8-129 24-144 (317)
134 1yqg_A Pyrroline-5-carboxylate 98.4 4.3E-07 1.5E-11 80.5 6.6 72 9-88 1-72 (263)
135 3ggo_A Prephenate dehydrogenas 98.4 5E-06 1.7E-10 75.7 13.4 105 8-120 33-142 (314)
136 2hk9_A Shikimate dehydrogenase 98.3 2.3E-07 8E-12 83.0 4.2 112 8-133 129-244 (275)
137 3pid_A UDP-glucose 6-dehydroge 98.3 3.1E-06 1.1E-10 80.0 11.0 111 7-124 35-171 (432)
138 2f1k_A Prephenate dehydrogenas 98.3 7E-06 2.4E-10 73.3 12.4 100 9-118 1-103 (279)
139 2p4q_A 6-phosphogluconate dehy 98.3 1.1E-05 3.6E-10 78.1 14.0 115 9-128 11-131 (497)
140 2o3j_A UDP-glucose 6-dehydroge 98.3 2.2E-06 7.4E-11 82.8 9.1 77 6-86 7-99 (481)
141 3nkl_A UDP-D-quinovosamine 4-d 98.3 7.1E-07 2.4E-11 71.2 4.8 90 7-102 3-97 (141)
142 3dtt_A NADP oxidoreductase; st 98.3 2.8E-06 9.6E-11 74.5 9.0 78 7-92 18-109 (245)
143 3gg2_A Sugar dehydrogenase, UD 98.3 5.5E-06 1.9E-10 79.2 11.5 73 9-85 3-90 (450)
144 3cmc_O GAPDH, glyceraldehyde-3 98.2 2.7E-06 9.1E-11 77.8 8.7 100 8-107 1-123 (334)
145 1np3_A Ketol-acid reductoisome 98.2 1.4E-06 4.7E-11 80.3 5.8 86 8-102 16-105 (338)
146 2izz_A Pyrroline-5-carboxylate 98.2 6.9E-06 2.4E-10 75.1 10.3 80 6-93 20-104 (322)
147 2g5c_A Prephenate dehydrogenas 98.2 2E-05 6.7E-10 70.5 12.7 106 9-121 2-111 (281)
148 3cps_A Glyceraldehyde 3-phosph 98.2 2.2E-06 7.5E-11 78.7 6.4 101 6-106 15-139 (354)
149 1evy_A Glycerol-3-phosphate de 98.2 8E-06 2.7E-10 76.0 10.2 80 9-92 16-104 (366)
150 1mv8_A GMD, GDP-mannose 6-dehy 98.2 7.1E-06 2.4E-10 78.3 10.0 73 9-86 1-89 (436)
151 2y1e_A 1-deoxy-D-xylulose 5-ph 98.1 0.00014 4.8E-09 66.2 17.6 211 8-238 21-267 (398)
152 3c24_A Putative oxidoreductase 98.1 6.3E-06 2.2E-10 74.0 9.0 76 8-93 11-87 (286)
153 3ktd_A Prephenate dehydrogenas 98.1 4.8E-06 1.6E-10 76.5 8.2 89 8-103 8-99 (341)
154 3b1j_A Glyceraldehyde 3-phosph 98.1 2.3E-05 8E-10 71.6 12.5 100 8-107 2-126 (339)
155 2q3e_A UDP-glucose 6-dehydroge 98.1 1.6E-05 5.4E-10 76.5 11.7 76 8-86 5-95 (467)
156 3k96_A Glycerol-3-phosphate de 98.1 8.4E-06 2.9E-10 75.5 9.2 98 7-108 28-138 (356)
157 4dpl_A Malonyl-COA/succinyl-CO 98.1 3.7E-06 1.3E-10 77.7 6.7 92 7-102 6-108 (359)
158 4dpk_A Malonyl-COA/succinyl-CO 98.1 3.7E-06 1.3E-10 77.7 6.7 92 7-102 6-108 (359)
159 1gad_O D-glyceraldehyde-3-phos 98.1 1.3E-05 4.6E-10 73.0 10.2 98 8-106 1-122 (330)
160 4a7p_A UDP-glucose dehydrogena 98.1 1.1E-05 3.8E-10 76.8 10.0 111 7-123 7-146 (446)
161 4e12_A Diketoreductase; oxidor 98.1 5E-05 1.7E-09 68.0 13.4 81 8-92 4-106 (283)
162 2y0c_A BCEC, UDP-glucose dehyd 98.1 3E-05 1E-09 74.7 12.5 109 7-121 7-143 (478)
163 2x5j_O E4PDH, D-erythrose-4-ph 98.1 8.3E-06 2.8E-10 74.7 8.2 99 8-106 2-126 (339)
164 1lss_A TRK system potassium up 98.1 2E-05 6.9E-10 62.2 9.3 120 8-145 4-130 (140)
165 2rcy_A Pyrroline carboxylate r 98.0 7.7E-06 2.6E-10 72.3 7.1 82 8-103 4-90 (262)
166 2vns_A Metalloreductase steap3 98.0 8.5E-06 2.9E-10 70.0 6.9 69 7-85 27-95 (215)
167 3hdj_A Probable ornithine cycl 98.0 1.2E-06 4E-11 79.7 1.1 112 8-130 121-236 (313)
168 1hdg_O Holo-D-glyceraldehyde-3 98.0 1.2E-05 4.1E-10 73.4 7.5 98 9-106 1-123 (332)
169 3g79_A NDP-N-acetyl-D-galactos 98.0 4.3E-06 1.5E-10 80.2 4.7 76 6-85 16-113 (478)
170 2d2i_A Glyceraldehyde 3-phosph 98.0 4E-05 1.4E-09 70.8 10.7 100 8-107 2-126 (380)
171 3u62_A Shikimate dehydrogenase 98.0 2.8E-06 9.7E-11 74.7 2.8 112 10-134 110-225 (253)
172 1z82_A Glycerol-3-phosphate de 98.0 1.7E-05 5.7E-10 73.0 8.0 94 8-107 14-115 (335)
173 2egg_A AROE, shikimate 5-dehyd 97.9 5.5E-06 1.9E-10 74.8 4.3 118 8-132 141-264 (297)
174 2dpo_A L-gulonate 3-dehydrogen 97.9 3.3E-05 1.1E-09 70.3 9.4 77 6-86 4-100 (319)
175 1jay_A Coenzyme F420H2:NADP+ o 97.9 2E-05 6.8E-10 67.3 7.5 79 9-92 1-83 (212)
176 3au8_A 1-deoxy-D-xylulose 5-ph 97.9 0.00072 2.5E-08 62.7 18.1 214 7-238 76-351 (488)
177 1x0v_A GPD-C, GPDH-C, glycerol 97.9 2.8E-05 9.6E-10 71.9 8.6 84 7-93 7-110 (354)
178 3dr3_A N-acetyl-gamma-glutamyl 97.9 1.6E-05 5.6E-10 72.6 6.6 92 8-102 4-104 (337)
179 3hsk_A Aspartate-semialdehyde 97.9 1.2E-05 4.2E-10 74.7 5.5 93 6-101 17-121 (381)
180 2ew2_A 2-dehydropantoate 2-red 97.8 4.1E-05 1.4E-09 69.3 8.5 82 8-93 3-94 (316)
181 1npy_A Hypothetical shikimate 97.8 2.3E-05 7.8E-10 69.6 6.3 112 9-133 120-238 (271)
182 1rm4_O Glyceraldehyde 3-phosph 97.8 9.8E-05 3.4E-09 67.3 10.4 100 8-107 1-126 (337)
183 1txg_A Glycerol-3-phosphate de 97.8 5.6E-05 1.9E-09 69.2 8.6 81 9-93 1-91 (335)
184 3phh_A Shikimate dehydrogenase 97.8 6E-05 2.1E-09 66.6 8.3 111 9-135 119-235 (269)
185 2csu_A 457AA long hypothetical 97.8 2E-05 6.7E-10 75.5 5.5 109 7-128 7-125 (457)
186 2obn_A Hypothetical protein; s 97.8 3E-05 1E-09 70.8 6.4 120 8-137 7-137 (349)
187 1dlj_A UDP-glucose dehydrogena 97.8 0.00012 4.1E-09 68.9 10.5 71 9-85 1-85 (402)
188 3l4b_C TRKA K+ channel protien 97.8 0.00016 5.4E-09 62.0 10.3 107 9-127 1-115 (218)
189 1gpj_A Glutamyl-tRNA reductase 97.7 0.00023 7.8E-09 67.1 11.4 90 8-103 167-264 (404)
190 1yj8_A Glycerol-3-phosphate de 97.7 3.8E-05 1.3E-09 71.7 5.9 82 8-92 21-122 (375)
191 2qyt_A 2-dehydropantoate 2-red 97.7 7.8E-05 2.7E-09 67.6 7.8 82 7-93 7-103 (317)
192 3ff4_A Uncharacterized protein 97.7 5.3E-05 1.8E-09 58.6 5.5 101 8-128 4-109 (122)
193 1f0y_A HCDH, L-3-hydroxyacyl-C 97.7 0.00023 8E-09 64.2 10.7 74 8-85 15-112 (302)
194 1leh_A Leucine dehydrogenase; 97.7 0.00012 4.2E-09 67.6 8.8 107 8-128 173-281 (364)
195 3mwd_B ATP-citrate synthase; A 97.7 0.00034 1.2E-08 63.6 11.4 120 6-128 8-135 (334)
196 3fwz_A Inner membrane protein 97.6 0.00036 1.2E-08 55.2 10.2 119 8-145 7-133 (140)
197 3d4o_A Dipicolinate synthase s 97.6 0.00018 6.2E-09 64.7 9.4 116 8-138 155-275 (293)
198 3c7a_A Octopine dehydrogenase; 97.6 0.00023 8E-09 67.0 10.4 99 8-109 2-120 (404)
199 1p77_A Shikimate 5-dehydrogena 97.6 6.2E-05 2.1E-09 67.0 5.9 116 8-130 119-238 (272)
200 1vm6_A DHPR, dihydrodipicolina 97.6 0.0001 3.4E-09 62.8 6.8 98 8-133 12-110 (228)
201 3fr7_A Putative ketol-acid red 97.6 5E-05 1.7E-09 71.9 5.4 82 9-93 55-141 (525)
202 2d0i_A Dehydrogenase; structur 97.6 0.00011 3.9E-09 67.2 7.7 66 8-84 146-211 (333)
203 2rir_A Dipicolinate synthase, 97.6 0.00014 4.9E-09 65.6 8.0 106 8-128 157-265 (300)
204 3fbt_A Chorismate mutase and s 97.6 3.1E-05 1.1E-09 69.0 3.3 114 8-134 122-240 (282)
205 1pzg_A LDH, lactate dehydrogen 97.6 0.00017 5.8E-09 66.0 8.3 78 1-81 1-86 (331)
206 2r00_A Aspartate-semialdehyde 97.6 3.2E-05 1.1E-09 71.0 3.3 89 7-102 2-94 (336)
207 3pwz_A Shikimate dehydrogenase 97.6 6E-05 2E-09 67.0 4.9 119 8-134 120-242 (272)
208 3c85_A Putative glutathione-re 97.6 0.00057 2E-08 56.6 10.7 110 8-129 39-157 (183)
209 2g0t_A Conserved hypothetical 97.6 7E-05 2.4E-09 68.5 5.4 121 7-137 21-154 (350)
210 2g82_O GAPDH, glyceraldehyde-3 97.6 0.00018 6.3E-09 65.4 8.0 98 9-107 1-121 (331)
211 2ph5_A Homospermidine synthase 97.5 4.5E-05 1.5E-09 72.3 4.1 90 8-101 13-111 (480)
212 1hyh_A L-hicdh, L-2-hydroxyiso 97.5 0.00032 1.1E-08 63.6 9.5 74 9-86 2-82 (309)
213 3llv_A Exopolyphosphatase-rela 97.5 0.00028 9.6E-09 55.8 8.0 108 8-128 6-120 (141)
214 1zej_A HBD-9, 3-hydroxyacyl-CO 97.5 0.00023 7.7E-09 63.9 8.0 74 8-87 12-87 (293)
215 1obf_O Glyceraldehyde 3-phosph 97.5 0.00061 2.1E-08 61.8 10.3 99 8-106 1-125 (335)
216 2b4r_O Glyceraldehyde-3-phosph 97.4 0.00043 1.5E-08 62.9 8.8 100 6-106 9-133 (345)
217 3ojo_A CAP5O; rossmann fold, c 97.4 0.00024 8.4E-09 67.1 7.4 109 9-125 12-149 (431)
218 3o8q_A Shikimate 5-dehydrogena 97.4 6.3E-05 2.2E-09 67.1 3.1 118 8-133 126-247 (281)
219 2ep7_A GAPDH, glyceraldehyde-3 97.4 0.0002 6.8E-09 65.1 6.3 98 8-105 2-122 (342)
220 2ekl_A D-3-phosphoglycerate de 97.4 0.00029 1E-08 63.9 7.2 67 8-85 142-208 (313)
221 3jyo_A Quinate/shikimate dehyd 97.4 9.5E-05 3.2E-09 66.1 3.8 121 8-135 127-256 (283)
222 2nqt_A N-acetyl-gamma-glutamyl 97.4 0.0001 3.5E-09 67.9 4.1 91 6-101 7-107 (352)
223 2g1u_A Hypothetical protein TM 97.4 0.00018 6E-09 58.1 5.0 108 7-126 18-133 (155)
224 3vtf_A UDP-glucose 6-dehydroge 97.4 0.00097 3.3E-08 63.0 10.7 73 7-84 20-108 (444)
225 1nyt_A Shikimate 5-dehydrogena 97.4 0.0002 6.7E-09 63.7 5.6 115 8-130 119-237 (271)
226 3hwr_A 2-dehydropantoate 2-red 97.4 0.00051 1.8E-08 62.4 8.5 79 7-92 18-105 (318)
227 2dbq_A Glyoxylate reductase; D 97.4 0.00027 9.2E-09 64.8 6.6 67 8-85 150-216 (334)
228 3don_A Shikimate dehydrogenase 97.3 9.5E-06 3.3E-10 72.3 -3.2 117 8-135 117-237 (277)
229 1q0q_A 1-deoxy-D-xylulose 5-ph 97.3 0.0025 8.7E-08 58.2 12.6 209 8-238 9-275 (406)
230 2w2k_A D-mandelate dehydrogena 97.3 0.00027 9.2E-09 65.1 6.3 69 8-85 163-232 (348)
231 3jtm_A Formate dehydrogenase, 97.3 0.00036 1.2E-08 64.2 7.0 68 8-84 164-231 (351)
232 3gg9_A D-3-phosphoglycerate de 97.3 0.00044 1.5E-08 63.7 7.5 67 8-84 160-226 (352)
233 2hjs_A USG-1 protein homolog; 97.3 8.9E-05 3E-09 68.1 2.8 86 8-101 6-96 (340)
234 1gdh_A D-glycerate dehydrogena 97.3 0.00037 1.3E-08 63.4 6.9 67 8-84 146-213 (320)
235 3h9e_O Glyceraldehyde-3-phosph 97.3 0.0022 7.6E-08 58.1 11.7 98 7-106 6-128 (346)
236 1vkn_A N-acetyl-gamma-glutamyl 97.3 0.00037 1.3E-08 63.9 6.6 90 7-101 12-104 (351)
237 4dgs_A Dehydrogenase; structur 97.3 0.00073 2.5E-08 61.8 8.5 63 8-84 171-233 (340)
238 2hmt_A YUAA protein; RCK, KTN, 97.3 0.0008 2.7E-08 52.9 7.8 106 9-127 7-120 (144)
239 3ba1_A HPPR, hydroxyphenylpyru 97.3 0.00046 1.6E-08 63.1 7.1 63 8-84 164-226 (333)
240 1mx3_A CTBP1, C-terminal bindi 97.3 0.00032 1.1E-08 64.5 5.9 67 8-84 168-234 (347)
241 2g76_A 3-PGDH, D-3-phosphoglyc 97.3 0.00066 2.3E-08 62.0 7.9 67 8-85 165-231 (335)
242 1wwk_A Phosphoglycerate dehydr 97.2 0.0005 1.7E-08 62.1 6.9 67 8-85 142-208 (307)
243 4g2n_A D-isomer specific 2-hyd 97.2 0.00041 1.4E-08 63.6 6.2 66 8-84 173-238 (345)
244 2pv7_A T-protein [includes: ch 97.2 0.0029 9.8E-08 56.9 11.5 98 9-132 22-122 (298)
245 3ghy_A Ketopantoate reductase 97.2 0.00037 1.3E-08 63.9 5.6 76 8-90 3-87 (335)
246 2nac_A NAD-dependent formate d 97.2 0.0005 1.7E-08 64.1 6.5 68 8-84 191-258 (393)
247 2gcg_A Glyoxylate reductase/hy 97.2 0.0004 1.4E-08 63.5 5.5 68 8-85 155-222 (330)
248 3mog_A Probable 3-hydroxybutyr 97.2 0.0014 4.8E-08 63.0 9.5 74 8-86 5-97 (483)
249 2yjz_A Metalloreductase steap4 96.2 6.2E-05 2.1E-09 63.8 0.0 68 7-85 18-85 (201)
250 1t2d_A LDH-P, L-lactate dehydr 97.1 0.00086 2.9E-08 61.0 7.5 71 8-82 4-81 (322)
251 1y6j_A L-lactate dehydrogenase 97.1 0.00087 3E-08 60.9 7.5 81 1-85 1-86 (318)
252 2j6i_A Formate dehydrogenase; 97.1 0.00051 1.8E-08 63.6 6.0 68 8-84 164-232 (364)
253 3v1y_O PP38, glyceraldehyde-3- 97.1 0.0021 7.2E-08 58.1 9.8 98 8-106 3-127 (337)
254 1obb_A Maltase, alpha-glucosid 97.1 0.002 7E-08 61.5 10.1 79 8-89 3-93 (480)
255 3pym_A GAPDH 3, glyceraldehyde 97.1 0.0052 1.8E-07 55.4 12.1 98 8-106 1-123 (332)
256 1ldn_A L-lactate dehydrogenase 97.1 0.0011 3.9E-08 60.1 7.9 78 6-85 4-86 (316)
257 3lvf_P GAPDH 1, glyceraldehyde 97.1 0.0053 1.8E-07 55.4 12.0 98 8-106 4-125 (338)
258 4hy3_A Phosphoglycerate oxidor 97.1 0.00092 3.2E-08 61.7 7.2 67 8-85 176-242 (365)
259 2zqz_A L-LDH, L-lactate dehydr 97.1 0.0013 4.5E-08 59.8 8.2 84 1-86 1-89 (326)
260 4e5n_A Thermostable phosphite 97.1 0.00057 2E-08 62.4 5.7 106 8-125 145-255 (330)
261 2pi1_A D-lactate dehydrogenase 97.1 0.00076 2.6E-08 61.6 6.4 105 8-126 141-250 (334)
262 1jw9_B Molybdopterin biosynthe 97.1 0.00089 3E-08 58.6 6.5 92 8-102 31-151 (249)
263 3fef_A Putative glucosidase LP 97.0 0.0019 6.7E-08 61.2 9.2 76 6-84 3-86 (450)
264 1ez4_A Lactate dehydrogenase; 97.0 0.0014 4.8E-08 59.5 7.9 78 7-86 4-85 (318)
265 3d0o_A L-LDH 1, L-lactate dehy 97.0 0.0015 5.2E-08 59.3 8.1 78 6-85 4-86 (317)
266 4dib_A GAPDH, glyceraldehyde 3 97.0 0.0024 8.1E-08 57.8 9.1 99 7-106 3-125 (345)
267 3ego_A Probable 2-dehydropanto 97.0 0.0014 4.6E-08 59.3 7.7 78 8-91 2-85 (307)
268 2hjr_A Malate dehydrogenase; m 97.0 0.0018 6.3E-08 59.0 8.6 72 8-83 14-92 (328)
269 1u8x_X Maltose-6'-phosphate gl 97.0 0.0029 9.8E-08 60.5 9.9 76 7-84 27-113 (472)
270 1a5z_A L-lactate dehydrogenase 97.0 0.0026 9.1E-08 57.7 9.3 74 9-86 1-80 (319)
271 4fgw_A Glycerol-3-phosphate de 97.0 0.00095 3.2E-08 62.1 6.4 99 6-106 32-154 (391)
272 1ur5_A Malate dehydrogenase; o 97.0 0.0015 5.1E-08 59.1 7.6 73 8-84 2-81 (309)
273 3l9w_A Glutathione-regulated p 97.0 0.004 1.4E-07 58.6 10.7 81 8-94 4-89 (413)
274 1guz_A Malate dehydrogenase; o 97.0 0.0014 4.7E-08 59.3 7.1 72 9-84 1-80 (310)
275 1zcj_A Peroxisomal bifunctiona 97.0 0.0071 2.4E-07 57.9 12.4 74 7-85 36-126 (463)
276 1lld_A L-lactate dehydrogenase 97.0 0.0029 9.9E-08 57.3 9.2 76 7-86 6-88 (319)
277 2ewd_A Lactate dehydrogenase,; 96.9 0.0011 3.7E-08 60.3 6.2 72 8-83 4-82 (317)
278 1oju_A MDH, malate dehydrogena 96.9 0.0018 6.3E-08 58.0 7.6 73 9-84 1-80 (294)
279 3tnl_A Shikimate dehydrogenase 96.9 0.0008 2.7E-08 60.9 5.2 120 9-135 155-290 (315)
280 3gvx_A Glycerate dehydrogenase 96.9 0.00039 1.3E-08 62.2 3.0 63 8-84 122-184 (290)
281 3pzr_A Aspartate-semialdehyde 96.9 0.001 3.6E-08 61.4 6.0 90 9-106 1-98 (370)
282 2v6b_A L-LDH, L-lactate dehydr 96.9 0.0031 1.1E-07 56.8 9.0 75 9-86 1-80 (304)
283 3tum_A Shikimate dehydrogenase 96.9 0.00083 2.8E-08 59.4 5.0 118 8-133 125-250 (269)
284 3uw3_A Aspartate-semialdehyde 96.9 0.00091 3.1E-08 61.9 5.3 94 7-106 3-102 (377)
285 3hg7_A D-isomer specific 2-hyd 96.9 0.00027 9.3E-09 64.2 1.5 66 8-84 140-205 (324)
286 3k6j_A Protein F01G10.3, confi 96.9 0.0048 1.6E-07 58.7 10.1 76 6-86 52-143 (460)
287 2vhw_A Alanine dehydrogenase; 96.9 0.0018 6E-08 60.4 7.1 73 8-84 168-242 (377)
288 1id1_A Putative potassium chan 96.9 0.0046 1.6E-07 49.5 8.7 109 8-128 3-122 (153)
289 3i83_A 2-dehydropantoate 2-red 96.8 0.002 6.7E-08 58.6 7.1 93 8-107 2-109 (320)
290 2o4c_A Erythronate-4-phosphate 96.8 0.0015 5E-08 60.7 6.2 64 8-85 116-179 (380)
291 3gvi_A Malate dehydrogenase; N 96.8 0.0027 9.3E-08 57.6 7.8 75 6-84 5-86 (324)
292 1j4a_A D-LDH, D-lactate dehydr 96.8 0.002 6.9E-08 58.8 7.0 66 8-85 146-211 (333)
293 1ygy_A PGDH, D-3-phosphoglycer 96.8 0.0017 5.9E-08 63.2 6.9 66 8-84 142-207 (529)
294 3oet_A Erythronate-4-phosphate 96.8 0.0012 4.2E-08 61.1 5.4 63 8-84 119-181 (381)
295 3evt_A Phosphoglycerate dehydr 96.8 0.0002 6.9E-09 65.1 0.1 66 8-84 137-202 (324)
296 2raf_A Putative dinucleotide-b 96.8 0.0017 5.7E-08 55.2 5.8 73 7-107 18-94 (209)
297 1ks9_A KPA reductase;, 2-dehyd 96.8 0.00043 1.5E-08 61.8 2.2 78 9-93 1-83 (291)
298 3pwk_A Aspartate-semialdehyde 96.8 0.0013 4.5E-08 60.7 5.4 87 8-101 2-92 (366)
299 1qp8_A Formate dehydrogenase; 96.8 0.0013 4.6E-08 59.2 5.4 63 8-85 124-186 (303)
300 3vku_A L-LDH, L-lactate dehydr 96.8 0.003 1E-07 57.3 7.6 75 7-83 8-86 (326)
301 3doc_A Glyceraldehyde 3-phosph 96.8 0.0057 1.9E-07 55.2 9.2 98 8-106 2-125 (335)
302 3tz6_A Aspartate-semialdehyde 96.8 0.0018 6.2E-08 59.2 6.0 86 9-101 2-91 (344)
303 3ce6_A Adenosylhomocysteinase; 96.7 0.0052 1.8E-07 59.0 9.4 67 8-84 274-340 (494)
304 3hn2_A 2-dehydropantoate 2-red 96.7 0.0033 1.1E-07 56.8 7.7 78 8-93 2-89 (312)
305 3pqe_A L-LDH, L-lactate dehydr 96.7 0.0025 8.5E-08 58.0 6.8 75 7-83 4-83 (326)
306 3pp8_A Glyoxylate/hydroxypyruv 96.7 0.00021 7.3E-09 64.8 -0.6 66 8-84 139-204 (315)
307 3fi9_A Malate dehydrogenase; s 96.7 0.0065 2.2E-07 55.6 9.2 79 1-82 1-85 (343)
308 3jv7_A ADH-A; dehydrogenase, n 96.7 0.011 3.7E-07 54.1 10.8 89 9-102 173-269 (345)
309 1gr0_A Inositol-3-phosphate sy 96.7 0.0093 3.2E-07 54.1 9.9 126 6-134 13-199 (367)
310 1dxy_A D-2-hydroxyisocaproate 96.7 0.0017 5.8E-08 59.4 5.2 103 8-125 145-252 (333)
311 2cuk_A Glycerate dehydrogenase 96.7 0.0013 4.5E-08 59.5 4.3 62 8-85 144-205 (311)
312 1s6y_A 6-phospho-beta-glucosid 96.6 0.0061 2.1E-07 57.9 8.9 76 8-85 7-95 (450)
313 2yq5_A D-isomer specific 2-hyd 96.6 0.0017 5.7E-08 59.5 4.8 64 8-84 148-211 (343)
314 4g65_A TRK system potassium up 96.6 0.0055 1.9E-07 58.5 8.2 91 7-102 2-100 (461)
315 3h9u_A Adenosylhomocysteinase; 96.5 0.0085 2.9E-07 56.2 9.1 65 8-82 211-275 (436)
316 1t4b_A Aspartate-semialdehyde 96.5 0.0031 1.1E-07 58.3 6.2 92 9-107 2-100 (367)
317 3hja_A GAPDH, glyceraldehyde-3 96.5 0.0012 4.2E-08 59.9 3.3 98 7-106 20-146 (356)
318 3p7m_A Malate dehydrogenase; p 96.5 0.0068 2.3E-07 55.0 8.2 75 6-84 3-84 (321)
319 1c1d_A L-phenylalanine dehydro 96.5 0.022 7.4E-07 52.2 11.4 107 8-129 175-283 (355)
320 2wtb_A MFP2, fatty acid multif 96.5 0.0098 3.4E-07 60.1 9.8 74 8-86 312-404 (725)
321 4eez_A Alcohol dehydrogenase 1 96.4 0.028 9.6E-07 51.3 12.0 91 9-102 165-262 (348)
322 2eez_A Alanine dehydrogenase; 96.4 0.0051 1.7E-07 57.0 6.8 73 8-84 166-240 (369)
323 3k5p_A D-3-phosphoglycerate de 96.4 0.0022 7.4E-08 60.1 4.0 64 9-85 157-220 (416)
324 3n58_A Adenosylhomocysteinase; 96.4 0.011 3.9E-07 55.4 8.7 64 9-82 248-311 (464)
325 1sc6_A PGDH, D-3-phosphoglycer 96.3 0.0023 7.9E-08 60.0 4.1 65 8-85 145-209 (404)
326 3dfz_A SIRC, precorrin-2 dehyd 96.3 0.0077 2.6E-07 51.5 7.0 89 7-101 30-119 (223)
327 3two_A Mannitol dehydrogenase; 96.3 0.014 4.7E-07 53.5 9.3 86 9-102 178-264 (348)
328 4dvj_A Putative zinc-dependent 96.3 0.029 9.9E-07 51.7 11.4 96 8-108 172-275 (363)
329 3eag_A UDP-N-acetylmuramate:L- 96.3 0.013 4.3E-07 53.3 8.8 89 7-103 3-96 (326)
330 3gvp_A Adenosylhomocysteinase 96.3 0.012 4.2E-07 55.0 8.6 63 9-81 221-283 (435)
331 3kb6_A D-lactate dehydrogenase 96.3 0.0057 1.9E-07 55.8 6.3 65 8-84 141-205 (334)
332 1yqd_A Sinapyl alcohol dehydro 96.3 0.041 1.4E-06 50.8 12.2 91 9-102 189-281 (366)
333 1zud_1 Adenylyltransferase THI 96.3 0.0058 2E-07 53.4 6.1 34 8-42 28-61 (251)
334 3uog_A Alcohol dehydrogenase; 96.3 0.049 1.7E-06 50.1 12.7 87 9-102 191-286 (363)
335 3i6i_A Putative leucoanthocyan 96.2 0.007 2.4E-07 55.3 6.4 77 5-83 7-93 (346)
336 2cf5_A Atccad5, CAD, cinnamyl 96.2 0.033 1.1E-06 51.2 10.9 91 9-102 182-274 (357)
337 1xdw_A NAD+-dependent (R)-2-hy 96.2 0.0025 8.6E-08 58.2 3.2 64 8-84 146-209 (331)
338 3ulk_A Ketol-acid reductoisome 96.2 0.014 4.8E-07 54.5 8.1 85 8-101 37-129 (491)
339 3nep_X Malate dehydrogenase; h 96.2 0.0048 1.6E-07 55.8 5.0 74 9-84 1-80 (314)
340 3d64_A Adenosylhomocysteinase; 96.1 0.014 4.9E-07 55.8 8.4 64 8-81 277-340 (494)
341 1v8b_A Adenosylhomocysteinase; 96.1 0.013 4.4E-07 55.9 7.9 64 8-81 257-320 (479)
342 2x0j_A Malate dehydrogenase; o 96.1 0.01 3.5E-07 53.0 6.8 71 9-82 1-78 (294)
343 1wdk_A Fatty oxidation complex 96.1 0.0067 2.3E-07 61.2 6.2 74 8-86 314-406 (715)
344 3ldh_A Lactate dehydrogenase; 96.1 0.01 3.4E-07 53.9 6.7 74 7-83 20-99 (330)
345 2xxj_A L-LDH, L-lactate dehydr 96.1 0.017 5.7E-07 52.1 8.2 75 9-85 1-79 (310)
346 3u95_A Glycoside hydrolase, fa 96.1 0.011 3.9E-07 56.5 7.3 70 9-81 1-84 (477)
347 4a2c_A Galactitol-1-phosphate 96.1 0.063 2.2E-06 48.9 12.2 91 9-102 162-258 (346)
348 3t4e_A Quinate/shikimate dehyd 96.0 0.0084 2.9E-07 54.1 6.0 118 8-132 148-281 (312)
349 3ids_C GAPDH, glyceraldehyde-3 96.0 0.023 7.8E-07 51.7 8.7 98 8-106 2-137 (359)
350 4aj2_A L-lactate dehydrogenase 96.0 0.011 3.7E-07 53.8 6.7 74 6-82 17-96 (331)
351 2aef_A Calcium-gated potassium 96.0 0.01 3.4E-07 51.1 6.2 106 8-128 9-122 (234)
352 1nvt_A Shikimate 5'-dehydrogen 96.0 0.0028 9.4E-08 56.7 2.5 113 8-130 128-252 (287)
353 3da8_A Probable 5'-phosphoribo 96.0 0.03 1E-06 47.5 8.7 90 5-97 9-113 (215)
354 3krt_A Crotonyl COA reductase; 96.0 0.049 1.7E-06 51.9 11.3 89 9-102 230-343 (456)
355 3pff_A ATP-citrate synthase; p 95.9 0.037 1.3E-06 56.2 10.6 117 6-128 494-621 (829)
356 3dfu_A Uncharacterized protein 95.9 0.013 4.5E-07 50.3 6.3 91 7-131 5-97 (232)
357 3tl2_A Malate dehydrogenase; c 95.9 0.024 8.1E-07 51.2 8.2 73 6-83 6-88 (315)
358 3dqp_A Oxidoreductase YLBE; al 95.9 0.0066 2.3E-07 51.5 4.3 94 9-125 1-98 (219)
359 3h8v_A Ubiquitin-like modifier 95.8 0.015 5E-07 51.9 6.4 36 7-43 35-70 (292)
360 1pjc_A Protein (L-alanine dehy 95.8 0.018 6.3E-07 53.1 7.3 72 8-85 167-242 (361)
361 3lk7_A UDP-N-acetylmuramoylala 95.7 0.021 7.3E-07 54.3 7.7 88 8-103 9-102 (451)
362 3q0i_A Methionyl-tRNA formyltr 95.7 0.026 8.9E-07 51.0 7.7 77 5-82 4-94 (318)
363 3hm2_A Precorrin-6Y C5,15-meth 95.7 0.14 4.7E-06 41.3 11.6 113 7-124 25-144 (178)
364 1smk_A Malate dehydrogenase, g 95.7 0.019 6.4E-07 52.2 6.8 75 6-84 6-87 (326)
365 3s2e_A Zinc-containing alcohol 95.7 0.1 3.5E-06 47.4 11.8 88 9-102 168-262 (340)
366 3r6d_A NAD-dependent epimerase 95.6 0.029 9.8E-07 47.5 7.5 72 9-83 5-83 (221)
367 2tmg_A Protein (glutamate dehy 95.6 0.12 4.1E-06 48.2 12.1 110 7-128 208-335 (415)
368 2d4a_B Malate dehydrogenase; a 95.6 0.018 6.1E-07 51.9 6.3 72 10-85 1-79 (308)
369 3rui_A Ubiquitin-like modifier 95.6 0.026 8.9E-07 51.3 7.3 35 8-43 34-68 (340)
370 3ado_A Lambda-crystallin; L-gu 95.6 0.05 1.7E-06 49.1 9.0 79 1-85 1-99 (319)
371 3qwb_A Probable quinone oxidor 95.5 0.13 4.4E-06 46.6 12.0 87 9-102 150-246 (334)
372 1b8p_A Protein (malate dehydro 95.5 0.032 1.1E-06 50.8 7.8 73 7-82 4-92 (329)
373 3aoe_E Glutamate dehydrogenase 95.5 0.067 2.3E-06 50.0 9.8 110 7-129 217-340 (419)
374 1o6z_A MDH, malate dehydrogena 95.5 0.017 6E-07 51.8 5.8 74 9-84 1-81 (303)
375 3aog_A Glutamate dehydrogenase 95.5 0.085 2.9E-06 49.6 10.5 111 7-129 234-361 (440)
376 3p2y_A Alanine dehydrogenase/p 95.5 0.031 1E-06 51.6 7.3 44 8-54 184-227 (381)
377 4hv4_A UDP-N-acetylmuramate--L 95.5 0.032 1.1E-06 53.8 7.8 87 8-103 22-111 (494)
378 3dhn_A NAD-dependent epimerase 95.4 0.013 4.4E-07 49.8 4.5 99 8-125 4-104 (227)
379 2i6t_A Ubiquitin-conjugating e 95.4 0.027 9.1E-07 50.6 6.7 70 7-81 13-85 (303)
380 1h2b_A Alcohol dehydrogenase; 95.4 0.081 2.8E-06 48.5 10.1 131 9-154 188-329 (359)
381 3fpc_A NADP-dependent alcohol 95.4 0.069 2.4E-06 48.8 9.6 88 9-102 168-265 (352)
382 3g17_A Similar to 2-dehydropan 95.3 0.00089 3E-08 60.1 -3.4 81 8-93 2-82 (294)
383 3ew7_A LMO0794 protein; Q8Y8U8 95.3 0.08 2.7E-06 44.4 9.1 89 9-124 1-94 (221)
384 2h6e_A ADH-4, D-arabinose 1-de 95.3 0.093 3.2E-06 47.8 10.1 132 9-154 172-314 (344)
385 3tqh_A Quinone oxidoreductase; 95.3 0.073 2.5E-06 48.0 9.3 131 9-154 154-289 (321)
386 1l7d_A Nicotinamide nucleotide 95.3 0.036 1.2E-06 51.6 7.3 45 8-55 172-216 (384)
387 3auf_A Glycinamide ribonucleot 95.3 0.042 1.4E-06 47.1 7.1 91 7-97 21-125 (229)
388 4gsl_A Ubiquitin-like modifier 95.2 0.038 1.3E-06 54.0 7.5 35 8-43 326-360 (615)
389 3m6i_A L-arabinitol 4-dehydrog 95.2 0.2 6.9E-06 45.9 12.3 130 9-152 181-325 (363)
390 3vh1_A Ubiquitin-like modifier 95.2 0.032 1.1E-06 54.4 6.9 34 8-42 327-360 (598)
391 3uko_A Alcohol dehydrogenase c 95.2 0.055 1.9E-06 50.1 8.3 91 9-103 195-295 (378)
392 1mld_A Malate dehydrogenase; o 95.2 0.071 2.4E-06 48.1 8.8 72 9-84 1-79 (314)
393 4dio_A NAD(P) transhydrogenase 95.2 0.047 1.6E-06 50.9 7.6 45 8-55 190-234 (405)
394 1rjw_A ADH-HT, alcohol dehydro 95.1 0.22 7.6E-06 45.2 12.1 131 9-154 166-306 (339)
395 1x13_A NAD(P) transhydrogenase 95.1 0.043 1.5E-06 51.3 7.2 44 8-54 172-215 (401)
396 1hdo_A Biliverdin IX beta redu 95.1 0.018 6E-07 48.0 4.2 97 8-125 3-103 (206)
397 1pl8_A Human sorbitol dehydrog 95.0 0.28 9.6E-06 44.8 12.5 130 9-152 173-315 (356)
398 1piw_A Hypothetical zinc-type 95.0 0.042 1.4E-06 50.5 6.9 82 9-97 181-269 (360)
399 2bma_A Glutamate dehydrogenase 95.0 0.14 4.7E-06 48.4 10.3 117 8-130 252-390 (470)
400 4ea9_A Perosamine N-acetyltran 95.0 0.039 1.3E-06 46.9 6.2 81 7-97 11-95 (220)
401 3ip1_A Alcohol dehydrogenase, 95.0 0.094 3.2E-06 49.0 9.3 128 9-150 215-360 (404)
402 3cnb_A DNA-binding response re 95.0 0.29 9.8E-06 37.4 10.8 117 1-124 1-131 (143)
403 3ius_A Uncharacterized conserv 94.9 0.063 2.2E-06 47.2 7.6 70 8-84 5-74 (286)
404 3gjy_A Spermidine synthase; AP 94.9 0.29 9.9E-06 44.0 11.9 74 7-82 89-168 (317)
405 1uuf_A YAHK, zinc-type alcohol 94.9 0.19 6.5E-06 46.2 11.0 88 9-100 196-284 (369)
406 2yv3_A Aspartate-semialdehyde 94.8 0.0024 8.1E-08 58.3 -2.0 85 9-101 1-89 (331)
407 4b7c_A Probable oxidoreductase 94.8 0.12 4.2E-06 46.7 9.5 88 9-102 151-247 (336)
408 3fbg_A Putative arginate lyase 94.8 0.16 5.4E-06 46.3 10.2 86 9-100 152-244 (346)
409 3e8x_A Putative NAD-dependent 94.8 0.05 1.7E-06 46.5 6.4 101 7-125 20-123 (236)
410 2ywr_A Phosphoribosylglycinami 94.7 0.055 1.9E-06 45.9 6.4 77 9-85 2-92 (216)
411 1hye_A L-lactate/malate dehydr 94.7 0.052 1.8E-06 48.9 6.6 71 9-81 1-82 (313)
412 2d8a_A PH0655, probable L-thre 94.7 0.33 1.1E-05 44.1 12.0 131 10-152 170-312 (348)
413 1yzh_A TRNA (guanine-N(7)-)-me 94.7 0.67 2.3E-05 38.7 13.2 114 8-127 42-176 (214)
414 3dmy_A Protein FDRA; predicted 94.7 0.065 2.2E-06 51.1 7.3 68 60-128 22-90 (480)
415 1pjq_A CYSG, siroheme synthase 94.6 0.075 2.6E-06 50.6 7.8 87 7-100 11-100 (457)
416 2bw0_A 10-FTHFDH, 10-formyltet 94.6 0.054 1.8E-06 49.2 6.4 73 6-81 20-107 (329)
417 3tqr_A Phosphoribosylglycinami 94.6 0.13 4.6E-06 43.4 8.4 86 7-95 4-105 (215)
418 4ej6_A Putative zinc-binding d 94.6 0.087 3E-06 48.6 7.8 129 9-152 184-328 (370)
419 3h5n_A MCCB protein; ubiquitin 94.5 0.12 4.2E-06 47.3 8.7 34 8-42 118-151 (353)
420 3e05_A Precorrin-6Y C5,15-meth 94.5 0.29 9.8E-06 40.6 10.4 111 8-124 41-159 (204)
421 3mb5_A SAM-dependent methyltra 94.5 0.19 6.5E-06 43.3 9.6 112 8-124 94-211 (255)
422 1zsy_A Mitochondrial 2-enoyl t 94.5 0.16 5.6E-06 46.4 9.5 89 9-102 169-269 (357)
423 3e48_A Putative nucleoside-dip 94.4 0.059 2E-06 47.5 6.2 94 9-125 1-98 (289)
424 1qyd_A Pinoresinol-lariciresin 94.4 0.18 6.3E-06 44.7 9.4 72 8-83 4-86 (313)
425 3ond_A Adenosylhomocysteinase; 94.3 0.12 4.2E-06 49.2 8.3 66 8-83 265-330 (488)
426 3mjf_A Phosphoribosylamine--gl 94.3 0.019 6.6E-07 54.3 2.8 111 8-127 3-122 (431)
427 3hhp_A Malate dehydrogenase; M 94.3 0.1 3.6E-06 46.9 7.5 73 9-84 1-80 (312)
428 3qvo_A NMRA family protein; st 94.3 0.062 2.1E-06 46.0 5.8 74 6-83 21-98 (236)
429 1jvb_A NAD(H)-dependent alcoho 94.2 0.18 6.3E-06 45.8 9.2 134 9-154 172-316 (347)
430 3gaz_A Alcohol dehydrogenase s 94.2 0.11 3.6E-06 47.4 7.4 89 9-103 152-246 (343)
431 4a0s_A Octenoyl-COA reductase/ 94.1 0.46 1.6E-05 44.8 12.1 87 9-102 222-335 (447)
432 3av3_A Phosphoribosylglycinami 94.1 0.12 3.9E-06 43.8 7.0 88 9-96 4-105 (212)
433 4h7p_A Malate dehydrogenase; s 94.1 0.12 4.1E-06 47.1 7.5 75 6-82 22-109 (345)
434 1o54_A SAM-dependent O-methylt 94.0 0.22 7.5E-06 43.7 9.0 112 8-124 113-230 (277)
435 2eih_A Alcohol dehydrogenase; 94.0 0.33 1.1E-05 44.0 10.4 132 9-154 168-311 (343)
436 2yfq_A Padgh, NAD-GDH, NAD-spe 94.0 0.16 5.6E-06 47.5 8.4 110 7-128 211-342 (421)
437 3h2s_A Putative NADH-flavin re 94.0 0.054 1.9E-06 45.7 4.8 68 9-84 1-73 (224)
438 3njr_A Precorrin-6Y methylase; 94.0 0.68 2.3E-05 38.5 11.6 110 8-124 56-171 (204)
439 1vl6_A Malate oxidoreductase; 94.0 0.12 4.3E-06 47.5 7.3 89 7-103 191-292 (388)
440 1e3j_A NADP(H)-dependent ketos 93.9 0.28 9.5E-06 44.7 9.8 130 9-152 170-313 (352)
441 2bln_A Protein YFBG; transfera 93.9 0.096 3.3E-06 47.0 6.5 70 9-81 1-83 (305)
442 3slg_A PBGP3 protein; structur 93.9 0.036 1.2E-06 50.9 3.8 73 6-81 22-99 (372)
443 2zb4_A Prostaglandin reductase 93.9 0.43 1.5E-05 43.5 11.1 90 9-102 162-259 (357)
444 1wly_A CAAR, 2-haloacrylate re 93.9 0.37 1.3E-05 43.5 10.5 89 9-102 147-243 (333)
445 3gpi_A NAD-dependent epimerase 93.9 0.053 1.8E-06 47.8 4.7 104 8-133 3-111 (286)
446 1up7_A 6-phospho-beta-glucosid 93.8 0.12 4E-06 48.6 7.1 74 8-84 2-84 (417)
447 1y7t_A Malate dehydrogenase; N 93.8 0.11 3.7E-06 47.1 6.7 72 7-81 3-88 (327)
448 2yvl_A TRMI protein, hypotheti 93.8 0.28 9.6E-06 41.9 9.1 91 8-102 92-188 (248)
449 1qyc_A Phenylcoumaran benzylic 93.8 0.14 4.6E-06 45.5 7.2 86 8-97 4-104 (308)
450 2r6j_A Eugenol synthase 1; phe 93.7 0.11 3.7E-06 46.5 6.5 85 9-97 12-106 (318)
451 1kol_A Formaldehyde dehydrogen 93.7 0.41 1.4E-05 44.4 10.6 87 9-99 187-295 (398)
452 1fmt_A Methionyl-tRNA FMet for 93.6 0.15 5E-06 46.0 7.1 73 7-82 2-90 (314)
453 3k92_A NAD-GDH, NAD-specific g 93.6 0.098 3.3E-06 48.9 6.1 113 7-130 220-347 (424)
454 3bwc_A Spermidine synthase; SA 93.6 0.53 1.8E-05 42.0 10.8 75 7-83 95-179 (304)
455 2pwy_A TRNA (adenine-N(1)-)-me 93.6 0.29 9.8E-06 42.1 8.9 92 8-102 97-196 (258)
456 1v9l_A Glutamate dehydrogenase 93.6 0.055 1.9E-06 50.6 4.3 110 8-128 210-341 (421)
457 2j3h_A NADP-dependent oxidored 93.5 0.34 1.2E-05 43.9 9.5 90 9-102 157-254 (345)
458 1lu9_A Methylene tetrahydromet 93.5 0.09 3.1E-06 46.6 5.4 72 8-83 119-198 (287)
459 2wm3_A NMRA-like family domain 93.3 0.32 1.1E-05 43.0 8.9 71 8-82 5-81 (299)
460 3gms_A Putative NADPH:quinone 93.3 0.16 5.6E-06 46.1 7.0 88 9-103 146-243 (340)
461 3jyn_A Quinone oxidoreductase; 93.3 0.33 1.1E-05 43.7 9.0 89 9-102 142-238 (325)
462 2gas_A Isoflavone reductase; N 93.2 0.19 6.4E-06 44.6 7.2 86 8-97 2-103 (307)
463 2dph_A Formaldehyde dismutase; 93.2 0.24 8.1E-06 46.1 8.1 87 9-100 187-295 (398)
464 3tqq_A Methionyl-tRNA formyltr 93.2 0.18 6.1E-06 45.4 6.9 72 8-82 2-89 (314)
465 2cdc_A Glucose dehydrogenase g 93.1 0.12 4E-06 47.6 5.7 87 9-102 182-277 (366)
466 3kcq_A Phosphoribosylglycinami 93.0 0.15 5E-06 43.2 5.6 90 7-96 7-105 (215)
467 1yb5_A Quinone oxidoreductase; 93.0 0.55 1.9E-05 42.8 10.1 89 9-102 172-268 (351)
468 1lnq_A MTHK channels, potassiu 92.9 0.16 5.4E-06 46.1 6.3 106 8-128 115-228 (336)
469 4a27_A Synaptic vesicle membra 92.8 0.2 6.9E-06 45.6 6.8 87 9-103 144-238 (349)
470 3t8y_A CHEB, chemotaxis respon 92.8 1.2 4.1E-05 35.2 10.8 99 7-108 24-133 (164)
471 1gu7_A Enoyl-[acyl-carrier-pro 92.7 0.33 1.1E-05 44.4 8.3 89 9-102 169-274 (364)
472 1qor_A Quinone oxidoreductase; 92.7 0.58 2E-05 42.0 9.7 89 9-102 142-238 (327)
473 3rfo_A Methionyl-tRNA formyltr 92.7 0.16 5.5E-06 45.7 5.8 74 6-82 2-91 (317)
474 3hn7_A UDP-N-acetylmuramate-L- 92.7 0.26 9E-06 47.7 7.8 87 8-103 19-110 (524)
475 3cg0_A Response regulator rece 92.6 1.5 5.2E-05 33.1 10.9 110 6-120 7-125 (140)
476 1y8q_A Ubiquitin-like 1 activa 92.6 0.58 2E-05 42.6 9.6 119 8-134 36-160 (346)
477 2fca_A TRNA (guanine-N(7)-)-me 92.5 3.3 0.00011 34.4 13.7 111 8-124 39-170 (213)
478 3m2p_A UDP-N-acetylglucosamine 92.4 0.11 3.7E-06 46.4 4.4 106 8-135 2-113 (311)
479 3c1o_A Eugenol synthase; pheny 92.4 0.66 2.3E-05 41.3 9.7 90 8-101 4-110 (321)
480 2gn4_A FLAA1 protein, UDP-GLCN 92.4 0.87 3E-05 41.2 10.6 74 7-83 20-101 (344)
481 1tt5_A APPBP1, amyloid protein 92.4 0.42 1.4E-05 46.3 8.8 35 8-43 32-66 (531)
482 2jhf_A Alcohol dehydrogenase E 92.4 0.42 1.4E-05 43.9 8.5 85 9-97 193-285 (374)
483 2hcy_A Alcohol dehydrogenase 1 92.4 0.44 1.5E-05 43.3 8.5 134 9-154 171-315 (347)
484 3lp8_A Phosphoribosylamine-gly 92.3 0.042 1.4E-06 52.1 1.6 110 7-127 20-138 (442)
485 2xcl_A Phosphoribosylamine--gl 92.3 0.071 2.4E-06 50.0 3.2 113 9-127 1-117 (422)
486 3gqv_A Enoyl reductase; medium 92.3 0.4 1.4E-05 44.1 8.2 89 9-102 166-262 (371)
487 1v3u_A Leukotriene B4 12- hydr 92.2 0.72 2.5E-05 41.5 9.8 89 9-102 147-243 (333)
488 1kyq_A Met8P, siroheme biosynt 92.2 0.13 4.6E-06 45.2 4.6 89 7-100 12-137 (274)
489 1e3i_A Alcohol dehydrogenase, 92.1 0.4 1.4E-05 44.1 8.0 85 9-97 197-289 (376)
490 2yxd_A Probable cobalt-precorr 92.1 3.7 0.00013 32.6 13.5 70 8-82 36-109 (183)
491 1f8f_A Benzyl alcohol dehydrog 92.1 0.18 6.1E-06 46.4 5.6 131 9-152 192-337 (371)
492 1inl_A Spermidine synthase; be 92.1 1.5 5E-05 38.9 11.4 74 7-82 90-172 (296)
493 1xgk_A Nitrogen metabolite rep 92.1 0.44 1.5E-05 43.4 8.2 72 8-83 5-83 (352)
494 2py6_A Methyltransferase FKBM; 92.0 0.019 6.4E-07 53.9 -1.2 80 8-97 52-133 (409)
495 3cz5_A Two-component response 92.0 2.8 9.5E-05 32.3 11.9 110 7-123 4-125 (153)
496 2f00_A UDP-N-acetylmuramate--L 91.9 0.42 1.5E-05 45.8 8.2 86 8-103 19-108 (491)
497 3enk_A UDP-glucose 4-epimerase 91.9 0.26 8.7E-06 44.4 6.4 118 7-135 4-133 (341)
498 1p0f_A NADP-dependent alcohol 91.9 0.35 1.2E-05 44.4 7.3 90 9-102 193-292 (373)
499 4gx0_A TRKA domain protein; me 91.8 0.63 2.2E-05 45.4 9.5 108 8-128 127-241 (565)
500 1bgv_A Glutamate dehydrogenase 91.8 0.72 2.5E-05 43.4 9.3 117 7-129 229-368 (449)
No 1
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=100.00 E-value=7.3e-62 Score=456.34 Aligned_cols=329 Identities=27% Similarity=0.407 Sum_probs=265.8
Q ss_pred CceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
+++|||||||+|.||+. +++.+++.|+++|+||||++++++++++++||++ ++|+|+++||+++++|+|+|+||+.
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~---~~y~d~~ell~~~~iDaV~I~tP~~ 97 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVP---HAFGSYEEMLASDVIDAVYIPLPTS 97 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCS---EEESSHHHHHHCSSCSEEEECSCGG
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCC---eeeCCHHHHhcCCCCCEEEEeCCCc
Confidence 46799999999999986 5899999999999999999999999999999986 7899999999999999999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeee
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSF 164 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~ 164 (362)
.|++++++||++|||||||||++.|++++++|.++|+++|+++++++++||+|.++++|++| ++|.||+|..+++.+.+
T Consensus 98 ~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i-~~G~iG~i~~i~~~~~~ 176 (350)
T 4had_A 98 QHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLI-DEGAIGSLRHVQGAFTY 176 (350)
T ss_dssp GHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHH-HTTTTSSEEEEEEEEEE
T ss_pred hhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhh-hcCCCCcceeeeEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999 89999999999998876
Q ss_pred cCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEe
Q 018020 165 AGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCS 244 (362)
Q Consensus 165 ~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~ 244 (362)
..++. .+|+..+..+ ||.|.|+|+|.+|+++|++|. +|++|++... ...+.+.++.+.++++|+||.++.+. +
T Consensus 177 ~~~~~---~~~~~~~~~g-GG~l~d~g~H~id~~~~l~G~-~~~~V~a~~~-~~~~~~~d~~~~~~l~~~~g~~~~~~-~ 249 (350)
T 4had_A 177 FNRDA---SNMRNIPELG-GGGLPDIGVYPVMSTRFSTGK-EPLRIQANTE-RDPDFGTDIYSSVKADFDDFELSFYV-S 249 (350)
T ss_dssp ECCCC----------------CCHHHHHHHHHHHHHHHCC-CCSEEEEEEE-ECTTTCCEEEEEEEEECSSCEEEEEE-E
T ss_pred ccccc---ccccCChhhc-CCcccCCceehhHHHHHHcCC-CceEEEEEEE-EcCCCCceEEEEEEEEECCEEEEEEE-e
Confidence 55432 3566666664 599999999999999999994 5999999853 33455789999999999999876554 4
Q ss_pred eeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhhh
Q 018020 245 FLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIK 324 (362)
Q Consensus 245 ~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 324 (362)
+..+....++|+|++|++.+++................. .........+...+.|..++++|+++|+
T Consensus 250 ~~~~~~~~~~i~G~~G~i~i~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~F~~~i~ 316 (350)
T 4had_A 250 TQMANRQIMVFHGTNGYIEVKSPFNANRWGPEEIELADR-------------SHNESRIFRFQDSRQYRREVEAFARAVE 316 (350)
T ss_dssp SEEEEEEEEEEEESSCEEEESSTTTGGGTSCCEEEEECS-------------SSSEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCcccccccCceEEEEccccccccCCcceEEEecC-------------CCCceeEeecCCChHHHHHHHHHHHHHH
Confidence 444455679999999999997532111111111111111 0111111223344568899999999999
Q ss_pred cCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceee
Q 018020 325 NGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEI 360 (362)
Q Consensus 325 ~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l 360 (362)
+|+++.++ .+|++++++|++|+++|+++| +||.|
T Consensus 317 ~g~~~~~~-~~dal~~~~iieai~~Sa~~g-~wv~V 350 (350)
T 4had_A 317 NGKEEVVT-LENSKLNQKVIDAIYRASEKD-GWEAV 350 (350)
T ss_dssp HSCSCCCC-HHHHHHHHHHHHHHHHHTTSS-SCEEC
T ss_pred cCCCCCCC-HHHHHHHHHHHHHHHHHHHhC-CCcCC
Confidence 88877665 777999999999999999999 99986
No 2
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=100.00 E-value=6.6e-61 Score=459.22 Aligned_cols=344 Identities=20% Similarity=0.223 Sum_probs=280.3
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCC--------CcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEE
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAP--------NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~--------~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V 77 (362)
.+||||||||+|.||+.|++.+++.+ +++|+||||++++++++++++|+++ ++|+|+++||+++++|+|
T Consensus 24 s~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~---~~y~d~~~ll~~~~vD~V 100 (412)
T 4gqa_A 24 SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAE---KAYGDWRELVNDPQVDVV 100 (412)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCS---EEESSHHHHHHCTTCCEE
T ss_pred cccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCC---eEECCHHHHhcCCCCCEE
Confidence 36899999999999999999997653 6899999999999999999999986 789999999999999999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEE
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRT 157 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~ 157 (362)
+|+||+..|++++++||++|||||||||++.|++++++|.++|+++|+++++++++||+|.++++|++| ++|.||+|..
T Consensus 101 ~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~G~iG~i~~ 179 (412)
T 4gqa_A 101 DITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQII-ARGDIGEPVR 179 (412)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHH-HHTTTCSEEE
T ss_pred EECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHH-hcCCcCCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred EEEEeeecCC-cccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC-----------------
Q 018020 158 MHSCFSFAGD-AEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN----------------- 219 (362)
Q Consensus 158 i~~~~~~~~~-~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~----------------- 219 (362)
+++.+..... ..+.+.+|+.++...|||+|.|+|+|.+|+++|++| +|++|++.......
T Consensus 180 ~~~~~~~~~~~~~~~~~~wr~~~~~~GgG~l~d~g~H~iD~~~~l~G--~~~~V~a~~~~~~~~r~~~~~~~~~~~~~~~ 257 (412)
T 4gqa_A 180 FRGTFDQGFYNDPNLPWSWRCSKTLGGSGALGDLGAHTLSVAQFLLG--GIREVTASAQTCLRQRPVPQRDAGYASRVAA 257 (412)
T ss_dssp EEEEEECCSTTSTTSCCCGGGCTTTTCCSHHHHTHHHHHHHHHHHHC--CEEEEEEEEECCSCEEECC------------
T ss_pred EEEEeccccccCCCCCccceeccccCCCcchhhhhhhHHHHHHHHhC--CCeEEEEEEEecccccccccccccccccccc
Confidence 9998876432 334456799999998899999999999999999999 79999998532211
Q ss_pred -----CCCeeEeeEEEEEeCCCcEEEEEEeeeeCC---ceeEEEEeccceEEEcceeccCCCCcceEEeccccc----cc
Q 018020 220 -----EAGVILSCGASLHWDDGRVATFSCSFLANM---TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCF----FN 287 (362)
Q Consensus 220 -----~~~~~d~~~~~~~~~~G~~~~~~~~~~~~~---~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~----~~ 287 (362)
+.+++|++.++++|+||+++++++++..+. ..+++|+||+|++.+++... ....+....... +.
T Consensus 258 ~~~~~~~~~eD~~~~~l~f~~G~~~~~~~s~~~~~~~~~~~~~i~Gt~G~l~~~~~~~----~~l~~~~~~~~~~~~~~~ 333 (412)
T 4gqa_A 258 DAEWREVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERF----NELQVYRFNDDKHDRGFK 333 (412)
T ss_dssp CCCEEECCSCSEEEEEEEETTSCEEEEEEESCCTTCSSEEEEEEEETTEEEEEEGGGT----TEEEEEETTSCGGGCCEE
T ss_pred cccccccccceEEEEEEEeCCCcEEEEEEEeeecCCCCceEEEEEeCeEEEEEeccCC----ceEEEEecCCCcccccee
Confidence 235679999999999999999999988753 34799999999999974310 001111100000 00
Q ss_pred c-----cccccccCCcceeeecCCchhHHHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 288 D-----LVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 288 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
. ....+................+.+..++.+|+++|++|.++.++ .+|++++++|++|+++|+++| +||+|+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~ai~~g~~~~~~-~~dal~~~~v~~Ai~~Sa~~g-~~V~v~ 410 (412)
T 4gqa_A 334 TLYAGSQIPAYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGICGDDDCYPN-FEFGLQNQRVLSAIEASMVSR-RWVNVV 410 (412)
T ss_dssp EEECBTTSGGGGGTCCCSSCBCCCCHHHHHHHHHHHHHHHHSSSSCCSSC-HHHHHHHHHHHHHHHHHHHHC-SCEECC
T ss_pred eeccCCcCCcccccccccCcccccchhhHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHHHHcC-CceECC
Confidence 0 00000000000000112345677889999999999988877665 777999999999999999999 999986
No 3
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=100.00 E-value=1.2e-60 Score=454.14 Aligned_cols=340 Identities=23% Similarity=0.268 Sum_probs=277.9
Q ss_pred CCceeEEEEEeccHHHHHHHHHHhcCCC-------cEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEE
Q 018020 5 SQAAIRFGIIGAADIARKLSRAITLAPN-------AVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~-------~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V 77 (362)
.|+++||||||+|.||+.|++.++.+|+ ++|++|||++++++++++++||++ .+|+|+++||+++++|+|
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~---~~~~d~~~ll~~~~iDaV 79 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWS---TTETDWRTLLERDDVQLV 79 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCS---EEESCHHHHTTCTTCSEE
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCC---cccCCHHHHhcCCCCCEE
Confidence 3568999999999999999999988764 499999999999999999999986 789999999999999999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHH---HHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNA---CEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~---a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
+|+||++.|++++++||++|||||||||++.|++|+++|.++ ++++|+++++++++||+|.++++|++| ++|.||+
T Consensus 80 ~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~ 158 (390)
T 4h3v_A 80 DVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLV-ADGKIGT 158 (390)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH-HTTSSCS
T ss_pred EEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHH-HcCCCCc
Confidence 999999999999999999999999999999999999999665 777999999999999999999999999 8999999
Q ss_pred eEEEEEEeeecCC-cccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC--------------
Q 018020 155 LRTMHSCFSFAGD-AEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN-------------- 219 (362)
Q Consensus 155 i~~i~~~~~~~~~-~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~-------------- 219 (362)
|..+++.+..... ..+.+.+|+.++...|||+|.|+|+|.+|+++|++|. +|++|++.......
T Consensus 159 i~~v~~~~~~~~~~~~~~~~~wr~~~~~~GgG~l~d~g~H~iD~~~~l~G~-~~~~V~a~~~~~~~~~~~~~~~~~~~~~ 237 (390)
T 4h3v_A 159 VRHVRAQYLQDWIADPEAPLSWRLDKDKAGSGALGDIGAHIVDLTQFITGD-RIAEVSGRLETFVKERPKPEAHSGLSGT 237 (390)
T ss_dssp EEEEEEEEECCTTCSTTSCCCGGGCHHHHSCSHHHHTHHHHHHHHHHHHSC-CEEEEEEEEECSCCEEECTTCCCCC--C
T ss_pred ceeeEEEEeeeccCCCCCCccccccccccCCcchhhhHHHHHHHHHHHhCC-CceEEEEEEEeecccCCccccccccccc
Confidence 9999998876432 2334567998888888899999999999999999994 59999998532211
Q ss_pred ------CCCeeEeeEEEEEeCCCcEEEEEEeeeeCC---ceeEEEEeccceEEEcceeccCCCCcceEEecccc------
Q 018020 220 ------EAGVILSCGASLHWDDGRVATFSCSFLANM---TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRC------ 284 (362)
Q Consensus 220 ------~~~~~d~~~~~~~~~~G~~~~~~~~~~~~~---~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~------ 284 (362)
..+++|.+.++++|+||.++++++++..+. ..+++|+|++|++.++.... ....+......
T Consensus 238 ~~~~~~~~~vdd~~~~~~~~~~G~~~~~~~s~~~~~~~~~~~~~i~G~~G~l~~~~~~~----~~~~~~~~~~~~~~~~~ 313 (390)
T 4h3v_A 238 ASAERGPVTVDDAAVFLATFRGGALGVFEATRFATGRKNAIRIEINGSKGSLAFDFEDM----NLLHFYDATEDPETAGF 313 (390)
T ss_dssp CGGGEEECCSCSEEEEEEEETTSCEEEEEEESCCTTCSSEEEEEEEESSEEEEEEGGGT----TEEEEEETTSCTTTCCE
T ss_pred ccccccccccccceeeEEecCCCcEEeeeeeccccCCCCcceeEEEcceEEEEEecCCC----ceEEEecCCCCcccccc
Confidence 235778999999999999999999987653 34789999999999974221 11111111000
Q ss_pred -------cccccccccccCCcceeeecCCchhHHHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcc
Q 018020 285 -------FFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEP 357 (362)
Q Consensus 285 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~ 357 (362)
........|... .......+.|..++.+|+++|++|++|.++ .+|++++++|++|+++|+++| +|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~f~~ai~~g~~~~~~-~~dal~~~~i~~A~~~Sa~~g-~~ 385 (390)
T 4h3v_A 314 RRILATEPVHPYVAGWWPP------GHLLGYEHGFTHQVVDLVTAIAEGKDPEPS-FADGLQVQRVLAAVETSSTSR-QW 385 (390)
T ss_dssp EEEESCSTTSTTGGGSCCT------TCCCCTTHHHHHHHHHHHHHHHHTCCCSSC-HHHHHHHHHHHHHHHHHHHHT-BC
T ss_pred ccccccCccccccccccCC------CcccchhHHHHHHHHHHHHHHHcCCCCCCC-HHHHHHHHHHHHHHHHHHhCC-CC
Confidence 000000111110 011234567899999999999988877765 777999999999999999999 99
Q ss_pred eeec
Q 018020 358 IEIK 361 (362)
Q Consensus 358 V~l~ 361 (362)
|+|+
T Consensus 386 V~vp 389 (390)
T 4h3v_A 386 QEIP 389 (390)
T ss_dssp EECC
T ss_pred eECc
Confidence 9985
No 4
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=100.00 E-value=4.4e-59 Score=443.86 Aligned_cols=343 Identities=18% Similarity=0.174 Sum_probs=267.7
Q ss_pred CCceeEEEEEeccHHHHHHHHHHhc-------CCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEE
Q 018020 5 SQAAIRFGIIGAADIARKLSRAITL-------APNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~~~~~~~~-------~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V 77 (362)
.|+++||||||+|+||+.|++.++. .|+++|+||||++++++++++++||++ ++|+|+++||+++++|+|
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~---~~y~d~~ell~~~~iDaV 98 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFE---KATADWRALIADPEVDVV 98 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCS---EEESCHHHHHHCTTCCEE
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCC---eecCCHHHHhcCCCCcEE
Confidence 4789999999999999999887754 467899999999999999999999986 789999999999999999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEE
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRT 157 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~ 157 (362)
+|+||+..|++++++||++|||||||||++.|++|+++|+++|+++|+.+++++++||+|.++++|++| ++|.||+|..
T Consensus 99 ~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i-~~G~iG~i~~ 177 (393)
T 4fb5_A 99 SVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLV-GDGVIGRVNH 177 (393)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHH-HTTTTCSEEE
T ss_pred EECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHH-HcCCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred EEEEeeecCCccc-ccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeecccc----------CCCCeeEe
Q 018020 158 MHSCFSFAGDAEF-LKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVL----------NEAGVILS 226 (362)
Q Consensus 158 i~~~~~~~~~~~~-~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~----------~~~~~~d~ 226 (362)
+++.+........ ....|+..... |||+|.|+|+|.+|+++||+| +|.+|++...... ...+.++.
T Consensus 178 v~~~~~~~~~~~~~~~~~~~~~~~~-ggG~l~d~g~H~iD~~~~l~G--~~~~v~a~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
T 4fb5_A 178 VRVEMDEDFMADPDIFFYWKSELSA-GYGALDDFAVHPLSLLWYLFG--HVEAVITDMVKPYPDRPLSEGGRRAVENHDA 254 (393)
T ss_dssp EEEEEECCTTTCTTSCCCGGGCGGG-CCBHHHHTTHHHHHHHHHHTC--CEEEEEEEEECCCSEEECTTSSEEECCSBSE
T ss_pred eeeeeccccCCCccccccccccccC-CCceecceeeehHHHHHHhcC--CCeEEEEEeeecccCcccccCCccccccccc
Confidence 9998876433221 22234444444 569999999999999999999 7899988753221 12245678
Q ss_pred eEEEEEeCCCcEEEEEEeeeeCC---ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccc----cCCcc
Q 018020 227 CGASLHWDDGRVATFSCSFLANM---TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWV----PLPSE 299 (362)
Q Consensus 227 ~~~~~~~~~G~~~~~~~~~~~~~---~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 299 (362)
..+.++|++|..+++..++.... ..+++|+|++|++.++..... ...+................ ..+..
T Consensus 255 ~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~i~G~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 4fb5_A 255 ANVLMRLDGGISAVLMANRAAWGRKGRIALQIYGSKGSILYDQERMN----EFELYQAEGPGSEQGFRKILAAPAHRPYD 330 (393)
T ss_dssp EEEEEEEGGGCEEEEEEESCCTTCSSEEEEEEEESSEEEEEEGGGTT----EEEEEESCSCGGGCCCEEEECCTTSTTHH
T ss_pred ceeeeecCCCeEEEEEEEeeeccCCCceEEEEEeeeeEEEeccCCcc----eEEEeccCCCcccccceeecccccccccc
Confidence 88999999999999999987653 347999999999998743211 00111100000000000000 00000
Q ss_pred ee---eecCCchhHHHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceee
Q 018020 300 HV---VTTDIPQEACMVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEI 360 (362)
Q Consensus 300 ~~---~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l 360 (362)
.. ........+.|..++.+|+++|++|+++.++ .+|++++++|++|+++|+++| +||+|
T Consensus 331 ~~~~~~~~~~g~~~~~~~e~~~f~~~i~~~~~~~~~-~~d~l~~~~i~~A~~~Sa~~g-r~V~l 392 (393)
T 4fb5_A 331 RFIPAPGHGLGFNDLKIIECRELIRAITGEPSSIVT-FKDGLRIEKSVHAMAQSFHER-RWIEI 392 (393)
T ss_dssp HHCSSTTSCCCTTHHHHHHHHHHHHHHHCSCCCCCB-HHHHHHHHHHHHHHHHHHHTT-SCEEC
T ss_pred cccccCCcccchhHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHHHHcC-CEEeC
Confidence 00 0011234567889999999999988777665 778999999999999999999 99987
No 5
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=100.00 E-value=9.3e-58 Score=428.92 Aligned_cols=339 Identities=22% Similarity=0.262 Sum_probs=280.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
+++||||||+|.||..|++.++++|+++++++||+++++++++++++|++ .|+|++++++++++|+|+|+||+..|
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~----~~~~~~~~l~~~~~D~V~i~tp~~~h 79 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCA----GDATMEALLAREDVEMVIITVPNDKH 79 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCC----CCSSHHHHHHCSSCCEEEECSCTTSH
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCC----CcCCHHHHhcCCCCCEEEEeCChHHH
Confidence 57999999999999999999999999999999999999999999999975 59999999988899999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG 166 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~ 166 (362)
.+++++|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+.+..
T Consensus 80 ~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~i~~v~~~~~~~~ 158 (354)
T 3db2_A 80 AEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMI-DTKEIGEVSSIEAVFSNER 158 (354)
T ss_dssp HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHH-HTTTTCCEEEEEEEEECSG
T ss_pred HHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHH-hcCCCCCeEEEEEEEEecc
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999999987765
Q ss_pred CcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEeee
Q 018020 167 DAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSFL 246 (362)
Q Consensus 167 ~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~~ 246 (362)
+..|...+|+..+...|||.|.|+|+|.+|+++|++| .|++|++.........+.+|++.++++|+||+++++++++.
T Consensus 159 ~~~~~~~~w~~~~~~~ggG~l~d~g~H~ld~~~~l~G--~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~~s~~ 236 (354)
T 3db2_A 159 GLELKKGNWRGEPATAPGGPLTQLGVHQIDNLQFLLG--PVARVFNFGKPMYTEVENITVNQTLLEFEDGKQAYLGTNWA 236 (354)
T ss_dssp GGTCCTTCGGGCTTTSTTTHHHHTHHHHHHHHHHHHC--CEEEEEEEEECCSCSSSSCCEEEEEEEETTSCEEEEEEESS
T ss_pred CcccccCCCccccccCCCceeccchhHHHHHHHHHhC--CCeEEEEEeeccCCCCCCCceEEEEEEECCCCEEEEEEEec
Confidence 5555455799888888889999999999999999999 69999999755544467889999999999999999999998
Q ss_pred eCCceeEEEEeccceEEEcceeccCCCCcceEEeccccccc-cccc-ccccC-----CcceeeecCCchhHHHHH-HHHH
Q 018020 247 ANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFN-DLVT-GWVPL-----PSEHVVTTDIPQEACMVR-EFSR 318 (362)
Q Consensus 247 ~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~ 318 (362)
.+...+++|+|++|++.+++......... ... ... .... .|... .......... ....|.. ++.+
T Consensus 237 ~~~~~~~~i~G~~G~i~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 309 (354)
T 3db2_A 237 CPGVFSINVYGTKANLFYQLDFSWWSNSD-----VTD-EHSTLIKREFASMSDDPDNRILRDVKVDF-ESVDHLRVEVEE 309 (354)
T ss_dssp SSCEEEEEEEESSEEEEEEECGGGTTSTT-----SGG-GGEEEEEEEECC------CCCEEEEECCC-CCCCHHHHHHHH
T ss_pred cCCceEEEEEeccEEEEEeCCCcEEEEcc-----CCC-ccccccccccccccCCCccCCCcccceec-ccccccHHHHHH
Confidence 65447899999999999986431110000 000 000 0000 00000 0000000111 1234666 9999
Q ss_pred HHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 319 LVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 319 ~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
|+++|++|.+|..+ .++++++++|++|+++|+++| ++|+|+
T Consensus 310 f~~ai~~g~~~~~~-~~d~~~~~~i~~a~~~Sa~~g-~~V~l~ 350 (354)
T 3db2_A 310 VADVIRNGGETEIG-AEASLRNLAVVLAAVKSVHEK-RPVEIA 350 (354)
T ss_dssp HHHHHHHCCCCSSC-HHHHHHHHHHHHHHHHHHHHT-SCEEHH
T ss_pred HHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHHHhcC-CceeHH
Confidence 99999988877655 778999999999999999998 999874
No 6
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=100.00 E-value=1e-57 Score=429.95 Aligned_cols=353 Identities=64% Similarity=1.099 Sum_probs=282.0
Q ss_pred CCceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 5 SQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
+++++||||||+|.||..|++.+.+.+++++++|||+++++++.+++++|+++.+..|+|++++|+++++|+|+|+||+.
T Consensus 3 ~~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 3 TETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS 82 (362)
T ss_dssp ---CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred CCCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH
Confidence 45689999999999999999999999999999999999999999999999754457899999999988999999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCC-CccceEEEEEEee
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQ-RFGQLRTMHSCFS 163 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g-~iG~i~~i~~~~~ 163 (362)
.|.+++++||++||||+||||++.+.+++++|.++|+++|+.+++++++||+|.++++|++| ++| .||+|..+++.+.
T Consensus 83 ~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i-~~g~~iG~i~~v~~~~~ 161 (362)
T 1ydw_A 83 LHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPRTALLKEFL-SDSERFGQLKTVQSCFS 161 (362)
T ss_dssp GHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCGGGSGGGTTTTTGG-GCTTTTCSEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEeeccCHHHHHHHHHH-HhcCCccceEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 776 6999999999988
Q ss_pred ecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 164 FAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 164 ~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
++.++.|...+|+..+..+|||+|.|+|+|.+|+++|++|...|++|++.......+.+.+|.+.++++|+||+++++++
T Consensus 162 ~~~~~~~~~~~wr~~~~~~ggG~l~d~g~H~id~~~~l~g~~~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~~ 241 (362)
T 1ydw_A 162 FAGDEDFLKNDIRVKPGLDGLGALGDAGWYAIRATLLANNFELPKTVTAFPGAVLNEAGVILSCGASLSWEDGRTATIYC 241 (362)
T ss_dssp EECCHHHHHHCGGGCTTSSTTHHHHHTHHHHHHHHHHHTTTCCCSEEEECSCCEECTTSCEEEEEEEEECSSSCEEEEEE
T ss_pred ecCCcccccCCcccCcccCCCceeecccHHHHHHHHHhcCCCCCeEEEEeccccccCCCCceEEEEEEEECCCCEEEEEE
Confidence 77766666678999888888899999999999999999986569999998644444556899999999999999999999
Q ss_pred eeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhh
Q 018020 244 SFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANI 323 (362)
Q Consensus 244 ~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 323 (362)
++..+...+++|+|++|++.+++...........+.............+|.............+ .+..++.+|+++|
T Consensus 242 s~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~f~~~i 318 (362)
T 1ydw_A 242 SFLANLTMEITAIGTKGTLRVHDFIIPYKETEASFTTSTKAWFNDLVTAWVSPPSEHTVKTELP---QEACMVREFARLV 318 (362)
T ss_dssp ESEEEEEEEEEEEESSEEEEESSCSSCSBTTEEEEEEEESCCBCTTSSSBSSCCEEEEEECSSC---HHHHHHHHHTTCC
T ss_pred EcccCCCceEEEEeccEEEEECceeecccCCcceEEEecCccccccccccccCcceeccCCCch---HHHHHHHHHHHHH
Confidence 9988767789999999999998643222111112222111111112223333211111111111 1345778888888
Q ss_pred ----hcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 324 ----KNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 324 ----~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
++|.++.+...++++++++|++|+++|+++|++||+|+
T Consensus 319 ~~i~~~g~~~~~~~~~~~l~~~~ii~a~~~S~~~g~~~V~l~ 360 (362)
T 1ydw_A 319 GEIKNNGAKPDGYWPSISRKTQLVVDAVKESVDKNYQQISLS 360 (362)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHTTTCCEECC
T ss_pred hhhhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHcCCeEEEec
Confidence 66666655557889999999999999999986899874
No 7
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=100.00 E-value=4e-57 Score=424.64 Aligned_cols=337 Identities=17% Similarity=0.205 Sum_probs=278.9
Q ss_pred CCceeEEEEEeccHHHHHHHHHHhcC-CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 5 SQAAIRFGIIGAADIARKLSRAITLA-PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~~~~~~~~~-~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
.++++||||||+|.||..|++.+.+. ++++++++||+++++++++++++|+ ..|+|++++|+++++|+|+|+||+
T Consensus 10 ~~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~----~~~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 10 TDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA----RGHASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp CSSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC----EEESCHHHHHHHCCCSEEEECSCG
T ss_pred CCCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC----ceeCCHHHHhcCCCCCEEEECCCc
Confidence 34689999999999999999999988 8999999999999999999999986 589999999998899999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEee
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
..|.+++++|+++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+.
T Consensus 86 ~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~i~~v~~~~~ 164 (354)
T 3q2i_A 86 GLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAM-QEKRFGRIYMVNVNVF 164 (354)
T ss_dssp GGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHH-HTTTTCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHH-hcCCCCceEEEEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999888
Q ss_pred ecCCcccccC-ccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEE
Q 018020 164 FAGDAEFLKN-DIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFS 242 (362)
Q Consensus 164 ~~~~~~~~~~-~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~ 242 (362)
+..+..|.+. +|+..+..+ ||.|.|+|+|.+|+++|++| +|++|++.......+.+.+|++.++++|+||++++++
T Consensus 165 ~~~~~~~~~~~~w~~~~~~~-gG~l~d~g~H~ld~~~~l~G--~~~~v~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~ 241 (354)
T 3q2i_A 165 WTRPQEYYDAAGWRGTWEFD-GGAFMNQASHYVDLLDWLIG--PVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMN 241 (354)
T ss_dssp CBCCHHHHHTSTTTTCTTTT-CCCCCCCTHHHHHHHHHHHC--CEEEEEEEEECSSSSSSSCSEEEEEEEETTSCEEEEE
T ss_pred EecCchhccccCccccccCC-CchhhhhhhHHHHHHHHhcC--CceEEEEEeeccCCCCCccceeEEEEEECCCCEEEEE
Confidence 7766655543 788888776 59999999999999999999 7999999976555566789999999999999999999
Q ss_pred EeeeeCC---ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHH
Q 018020 243 CSFLANM---TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRL 319 (362)
Q Consensus 243 ~~~~~~~---~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (362)
+++.... ..+++|+|++|++.+++.. ......+.......... .. ..............+..++.+|
T Consensus 242 ~s~~~~~~~~~~~~~i~G~~G~i~~~~~~---~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~f 311 (354)
T 3q2i_A 242 VTMLTYPKNLEGSITILGEKGSVRVGGVA---VNEIQHWEFSEPHAMDE---EI----KDASYATTSVYGFGHPLYYDNV 311 (354)
T ss_dssp EESBCSSSCCEEEEEEEETTEEEEEETTT---TCEEEEEEESSCCGGGG---GH----HHHC-------CCSHHHHHHHH
T ss_pred EEeeecCCCCCcEEEEEeccEEEEECCcc---cccceeeeecccCCccc---cc----cccccCCcccCCccHHHHHHHH
Confidence 9998732 4689999999999998421 00111111111000000 00 0000000011112347789999
Q ss_pred HHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 320 VANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 320 ~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
+++|++|.++.. +.++++++++|++|+++|+++| ++|+|.
T Consensus 312 ~~~i~~~~~~~~-~~~d~~~~~~i~~a~~~Sa~~g-~~V~l~ 351 (354)
T 3q2i_A 312 IKTMRGEATPET-DGREGLKSLELLIAMYLSARDG-RRVSLP 351 (354)
T ss_dssp HHHHTTSCCCSS-BHHHHHHHHHHHHHHHHHHHHT-SCEESC
T ss_pred HHHHhcCCCCCC-CHHHHHHHHHHHHHHHHHHhcC-CeEeCC
Confidence 999998876655 4788999999999999999999 999985
No 8
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.5e-57 Score=432.40 Aligned_cols=351 Identities=17% Similarity=0.167 Sum_probs=267.7
Q ss_pred CccCCceeEEEEEeccH---HHHHHHHHHhcCCCcEEEE-EEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-----C
Q 018020 2 ATESQAAIRFGIIGAAD---IARKLSRAITLAPNAVLSA-VASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-----K 72 (362)
Q Consensus 2 ~~~~~~~~~v~iiG~G~---~g~~~~~~~~~~~~~~vv~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-----~ 72 (362)
+..+|+++||||||+|. ||..|++.++..+++++++ |||+++++++++++++|++ ...+|+|+++||++ +
T Consensus 31 ~~~~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~-~~~~~~~~~~ll~~~~~~~~ 109 (417)
T 3v5n_A 31 TETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLD-PSRVYSDFKEMAIREAKLKN 109 (417)
T ss_dssp ----CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCC-GGGBCSCHHHHHHHHHHCTT
T ss_pred ccccCCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCC-cccccCCHHHHHhcccccCC
Confidence 33457889999999998 9999999999998999996 9999999999999999984 23689999999998 7
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCc
Q 018020 73 DIDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 73 ~~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~i 152 (362)
++|+|+|+||+..|++++++||++||||+||||++.+++++++|.++++++|+++++++++||+|.++++|++| ++|.|
T Consensus 110 ~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~G~i 188 (417)
T 3v5n_A 110 GIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMI-ENGDI 188 (417)
T ss_dssp CCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHH-HTTTT
T ss_pred CCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHH-hcCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred cceEEEEEEeeecC--Ccc----cccCccCcCCCCCC-CcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeE
Q 018020 153 GQLRTMHSCFSFAG--DAE----FLKNDIRVKPDLDG-LGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVIL 225 (362)
Q Consensus 153 G~i~~i~~~~~~~~--~~~----~~~~~w~~~~~~~g-gg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d 225 (362)
|+|..+++.+.... .+. +...+|+.++..+| ||+|.|+|+|.+|+++|++|. +|++|++...........+|
T Consensus 189 G~i~~v~~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~lDl~~~l~G~-~~~~V~a~~~~~~~~~~~~D 267 (417)
T 3v5n_A 189 GAVRLVQMEYPQDWLTENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGL-ELEELAADLDSFVGGRQLDD 267 (417)
T ss_dssp CSEEEEEEEEECCTTSCC--------------------CCHHHHTHHHHHHHHHHHHCC-CEEEEEEEEECCSTTCCSCC
T ss_pred CCeEEEEEEEecccccCccccccCCCcCcccCHHHcCCccHHHHHHHHHHHHHHHhcCC-CceEEEEEEEecCCCCCCce
Confidence 99999999986422 111 33457999888877 799999999999999999995 59999999765556667899
Q ss_pred eeEEEEEeCC----CcEEEEEEeeeeCC---ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccc--ccc-
Q 018020 226 SCGASLHWDD----GRVATFSCSFLANM---TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTG--WVP- 295 (362)
Q Consensus 226 ~~~~~~~~~~----G~~~~~~~~~~~~~---~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~- 295 (362)
++.++++|+| |+++++++++..+. ..+++|+|++|++.+++.. .....+..... .......+ +..
T Consensus 268 ~~~~~l~~~~~~~~G~~~~~~~s~~~~~~~~~~~~~i~Gt~G~l~~~~~~----~~~l~~~~~~~-~~~~~~~~~~~~~~ 342 (417)
T 3v5n_A 268 NAHVLMRFREKDGTRAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKD----PNYLWYTPFGE-PKRLLTRAGAGASP 342 (417)
T ss_dssp EEEEEEEECCBTTBCCEEEEEEESCCTTCSSCCEEEEEESSEEEEEETTS----TTEEEEEETTS-CEEEEETTSTTCCH
T ss_pred EEEEEEEECCCCCCCeEEEEEEEecccCCCCCeEEEEEecceEEEEccCC----CCeEEEEeCCC-CcEEEecCCCccCc
Confidence 9999999999 99999999998653 3589999999999997421 11111111100 00000000 000
Q ss_pred ---CCcceeeecCCchhHHHHHHHHHHHHhhhc---CCCCC----CCchHhHHHHHHHHHHHHHHHhhCCcceee
Q 018020 296 ---LPSEHVVTTDIPQEACMVREFSRLVANIKN---GSKPE----QKWPIISRKTQLIIDAVKTSIERGFEPIEI 360 (362)
Q Consensus 296 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---g~~~~----~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l 360 (362)
.....+........+.|..++.+|+++|++ |.+|. ..+.+|+++++++++|+++|+++||+||+|
T Consensus 343 ~~~~~~~~~~g~~~~~~~~f~~~~~~f~~ai~~~~~G~~p~~~~~~~~~~dg~~~~~i~~A~~~S~~~~g~~V~v 417 (417)
T 3v5n_A 343 AAARVSRIPSGHPEGYLEGFANIYSEAARAIYAKRNGGKADPSVIYPTIDDGMRGMTFVDACVRSSERNGAWIKV 417 (417)
T ss_dssp HHHTTCCSCTTSCCCHHHHHHHHHHHHHHHHHTTC----CCTTCCCCCHHHHHHHHHHHHHHHHHHHTTSCCBC-
T ss_pred hhhhhccCCCCCCccHHHHHHHHHHHHHHHHHhhccCCCCcccCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeC
Confidence 000000001133456788999999999996 44431 345788999999999999999996699975
No 9
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=5.3e-57 Score=421.18 Aligned_cols=320 Identities=23% Similarity=0.313 Sum_probs=272.7
Q ss_pred cCCceeEEEEEecc-HHHHHHHHHHhcC-CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 4 ESQAAIRFGIIGAA-DIARKLSRAITLA-PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 4 ~~~~~~~v~iiG~G-~~g~~~~~~~~~~-~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
.+.+++||||||+| .+|..|++.+++. ++++|++|||++++++++++++++++ .+|+|++++|+++++|+|+|+|
T Consensus 14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~---~~~~~~~~ll~~~~vD~V~i~t 90 (340)
T 1zh8_A 14 KPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNP---AVFDSYEELLESGLVDAVDLTL 90 (340)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSC---EEESCHHHHHHSSCCSEEEECC
T ss_pred CCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCC---cccCCHHHHhcCCCCCEEEEeC
Confidence 34578999999999 7999999999998 89999999999999999999999974 6899999999998999999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEE
Q 018020 82 PTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSC 161 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~ 161 (362)
|+..|++++++||++||||+||||++.|++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..+++.
T Consensus 91 p~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~i~~v~~~ 169 (340)
T 1zh8_A 91 PVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELV-ESGAIGDPVFMNWQ 169 (340)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHH-HTTTTSSEEEEEEE
T ss_pred CchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHH-hcCCCCCcEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999 89999999999988
Q ss_pred eeecCC--cccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEE
Q 018020 162 FSFAGD--AEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVA 239 (362)
Q Consensus 162 ~~~~~~--~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~ 239 (362)
+..+.+ ..+...+|+.++..+| |.|.|+|+|.+|+++|++| +|++|++.........+.+|.+.++++|+||+.+
T Consensus 170 ~~~~~~~~~~~~~~~w~~~~~~~G-G~l~d~g~H~ld~~~~l~G--~~~~V~a~~~~~~~~~~~~D~~~~~l~~~~G~~~ 246 (340)
T 1zh8_A 170 IWVGMDENNKYVHTDWRKKPKHVG-GFLSDGGVHHAAAMRLILG--EIEWISAVAKDLSPLLGGMDFLSSIFEFENGTVG 246 (340)
T ss_dssp EEBCCCTTCSGGGCHHHHTTCSTT-THHHHHHHHHHHHHHHHHC--CEEEEEEEEECCCTTSSSCCEEEEEEEETTSCEE
T ss_pred EeccccccCCCCCcCceECCcCCC-ceeeeccHHHHHHHHHhhC--CCeEEEEEEEccCCCCCCcceEEEEEEeCCCCEE
Confidence 764432 2344567888887755 9999999999999999999 6999999865544445678999999999999999
Q ss_pred EEEEeeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHH
Q 018020 240 TFSCSFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRL 319 (362)
Q Consensus 240 ~~~~~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (362)
++++++..+...+++|+|++|++.+.. . .. ... ... ...+....|..++.+|
T Consensus 247 ~~~~s~~~~~~~~~~i~G~~G~i~~~~-----~-~~---~~~----------------~~~---~~~~~~~~~~~~~~~f 298 (340)
T 1zh8_A 247 NYTISYSLKGNERFEITGTKGKISISW-----D-KI---VLN----------------EEE---MKVPQENSYQKEFEDF 298 (340)
T ss_dssp EEEEESSSBCCCEEEEEESSCEEEEET-----T-EE---EET----------------TEE---EECCCCCHHHHHHHHH
T ss_pred EEEEEeeecCCCEEEEEeCcEEEEEEe-----C-Cc---ccc----------------cee---ecCCCcccHHHHHHHH
Confidence 999998876544999999999999831 0 00 000 000 0011124678999999
Q ss_pred HHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 320 VANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 320 ~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
+++|++|.++...+.+++++++++++|+++| +| ++|+|+
T Consensus 299 ~~~i~~g~~~p~~~~~~~l~~~~i~~a~~~S--~g-~~V~l~ 337 (340)
T 1zh8_A 299 YQVVAEGKPNDLGSPVQALKDLAFIEACVRS--AG-NKVFVS 337 (340)
T ss_dssp HHHHHSCCCCSSSCHHHHHHHHHHHHHHHHH--TT-SCEEGG
T ss_pred HHHHHhCCCCCCCCHHHHHHHHHHHHHHHHc--CC-CEEeCc
Confidence 9999976654444588899999999999999 77 999874
No 10
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=100.00 E-value=3.9e-57 Score=423.55 Aligned_cols=323 Identities=26% Similarity=0.405 Sum_probs=272.5
Q ss_pred CCceeEEEEEeccHHHH-HHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 5 SQAAIRFGIIGAADIAR-KLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+|+++||||||+|.||. .|++.+++.|+++|++|||+++++++++++++|++ .++|++++++++++|+|+|+||+
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~----~~~~~~~ll~~~~~D~V~i~tp~ 99 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGE----PVEGYPALLERDDVDAVYVPLPA 99 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSE----EEESHHHHHTCTTCSEEEECCCG
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCC----CcCCHHHHhcCCCCCEEEECCCc
Confidence 46789999999999998 69999999999999999999999999999999974 57999999999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEee
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
..|.+++++|+++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+.
T Consensus 100 ~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~G~iG~i~~v~~~~~ 178 (350)
T 3rc1_A 100 VLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADML-DEGVIGEIRSFAASFT 178 (350)
T ss_dssp GGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHH-HTTTTCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHH-hcCCCCCeEEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999987
Q ss_pred ecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 164 FAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 164 ~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
.+. +...+|+.++.. |||.|.|+|+|.+|+++|++|. +|++|++.... ....++++.+.++++|+||+++++++
T Consensus 179 ~~~---~~~~~wr~~~~~-gGG~l~d~g~H~ld~~~~l~G~-~~~~v~a~~~~-~~~~~~d~~~~~~l~~~~G~~~~~~~ 252 (350)
T 3rc1_A 179 IPP---KPQGDIRYQADV-GGGALLDIGVYPIRAAGLFLGA-DLEFVGAVLRH-ERDRDVVVGGNALLTTRQGVTAQLTF 252 (350)
T ss_dssp CCC---CCTTCGGGCTTT-TCHHHHHTTHHHHHHHHHHHCT-TCEEEEEEEEE-ETTTTEEEEEEEEEECTTCCEEEEEE
T ss_pred cCC---CCccccccCccc-CccHHHHHHHHHHHHHHHHcCC-CcEEEEEEEEe-CCCCCccceEEEEEEECCCCEEEEEE
Confidence 643 234578888887 5599999999999999999994 58999997432 33567899999999999999999999
Q ss_pred eeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhh
Q 018020 244 SFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANI 323 (362)
Q Consensus 244 ~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 323 (362)
++..+...+++|+|++|++.+++...........+...... .. .....+..+.|..++.+|+++|
T Consensus 253 s~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~e~~~f~~~i 317 (350)
T 3rc1_A 253 GMEHAYTNNYEFRGSTGRLWMNRVFTPPATYQPVVHIERQD-------------HA--EQFVLPAHDQFAKSIRAFAQAV 317 (350)
T ss_dssp ESSSCCEEEEEEEESSCEEEEESCSCCCTTCCCEEEEEETT-------------EE--EEEECCCCCHHHHHHHHHHHHH
T ss_pred ecCCCCCCEEEEEeCCEEEEECcccCCCCCCceEEEEecCC-------------ce--EEEEcCCccHHHHHHHHHHHHH
Confidence 99877777899999999999985321111111111111110 00 0111223356899999999999
Q ss_pred hcCCCCCCCchHhHHHHHHHHHHHHHHHhhC
Q 018020 324 KNGSKPEQKWPIISRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 324 ~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g 354 (362)
++|.++. .+.++++++++|++|+++|++++
T Consensus 318 ~~g~~~~-~~~~dal~~~~ii~ai~~Sa~~~ 347 (350)
T 3rc1_A 318 LSGEHPR-EWSEDSLRQASLVDAVRTGARDI 347 (350)
T ss_dssp HHCCCCH-HHHHHHHHHHHHHHHHHHHSEEE
T ss_pred HcCCCCC-CCHHHHHHHHHHHHHHHHHhhhh
Confidence 9887665 45788999999999999999876
No 11
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=100.00 E-value=1.2e-57 Score=429.30 Aligned_cols=336 Identities=16% Similarity=0.135 Sum_probs=261.6
Q ss_pred CceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|+++||||||+|.+|.. |++.+++.|+++|++|||+++++ ++++++ ++.+|+|++++|+++++|+|+|+||+.
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~~~~---~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL---SKERYP---QASIVRSFKELTEDPEIDLIVVNTPDN 76 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG---GGTTCT---TSEEESCSHHHHTCTTCCEEEECSCGG
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH---HHHhCC---CCceECCHHHHhcCCCCCEEEEeCChH
Confidence 35899999999999996 99999999999999999999765 456664 247899999999999999999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeee
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSF 164 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~ 164 (362)
.|++++++||++||||+||||++.|++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..+++.+..
T Consensus 77 ~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~G~iG~i~~v~~~~~~ 155 (362)
T 3fhl_A 77 THYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDIL-AKSLLGRLVEYESTFAR 155 (362)
T ss_dssp GHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHH-HTTTTSSEEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHH-HcCCCCCeEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999 89999999999998876
Q ss_pred cCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCC---CcEEEE
Q 018020 165 AGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDD---GRVATF 241 (362)
Q Consensus 165 ~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~---G~~~~~ 241 (362)
..+. +...+|+.++.. |||+|+|+|+|.+|+++|++| +|++|++.........+.+|++.++++|+| |+.+++
T Consensus 156 ~~~~-~~~~~w~~~~~~-ggG~l~d~g~H~id~~~~l~G--~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~~~~G~~~~~ 231 (362)
T 3fhl_A 156 YRNF-IKPNTWKETGES-GGGLTYNLGSHLIDQAIQLFG--MPEAVFADLGILREGGKVDDYFIIHLLHPSLAPNVKITL 231 (362)
T ss_dssp BCCC----------------CHHHHTHHHHHHHHHHHHC--CEEEEEEEEECCSTTCCSCCEEEEEEEEETTSTTSEEEE
T ss_pred cCCC-CCccccccCCCC-CCceeeeehhhHHHHHHHHhC--CCcEEEEEEEEeCCCCCcceEEEEEEEECCCCCCeEEEE
Confidence 4432 233458887775 569999999999999999999 799999997655556678999999999999 999999
Q ss_pred EEeeeeCCc-eeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcc------------eeeecCCch
Q 018020 242 SCSFLANMT-MDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSE------------HVVTTDIPQ 308 (362)
Q Consensus 242 ~~~~~~~~~-~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 308 (362)
++++..+.. .+++|+|++|++.+++..... ..+..... +....|...+.. .........
T Consensus 232 ~~s~~~~~~~~~~~i~G~~G~~~~~~~~~~~----~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (362)
T 3fhl_A 232 KASYLMREAEPRFALHGTLGSYVKYGVDKQE----AALLAGEI----PERPNWGEESEQEWGLLHTEINGKEICRKYPGI 303 (362)
T ss_dssp EEESBCSSCCCSEEEEESSCEEEECCC-----------------------CCCSCCCGGGCEEEEEEETTEEEEEEECCC
T ss_pred EEEeccCCCCCEEEEEECCcEEEEeCCCccH----HHHhcCCC----CCCCccCCCchhhCcEEEecCCCcceeeecCCC
Confidence 999987654 479999999999996432110 00000000 000011111000 000001111
Q ss_pred hHHHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 309 EACMVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 309 ~~~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
...|..++.+|+++|++|.++..+ .+|++++++|++|+++|+++| ++|.|.|
T Consensus 304 ~~~~~~~~~~f~~ai~~g~~~~~~-~~dal~~~~ii~a~~~Sa~~g-~~V~l~~ 355 (362)
T 3fhl_A 304 AGNYGGFYQNIYEHLCLGQPLETH-AQDILNVIRIIEAAYQSHREN-KIVNLKE 355 (362)
T ss_dssp CCCTTHHHHHHHHHHHHCCCCSCB-THHHHHHHHHHHHHHHHHHHT-SCEEC--
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHhhhhcC-CEEEecc
Confidence 234678899999999988877654 777999999999999999999 9999875
No 12
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=100.00 E-value=2e-56 Score=415.71 Aligned_cols=325 Identities=22% Similarity=0.306 Sum_probs=273.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
+++||||||+|.||..|++.+++.+++++++|||++++++++++++++++ .+|+|++++++++++|+|+|+||+..|
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIP---VAYGSYEELCKDETIDIIYIPTYNQGH 80 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCC---CCBSSHHHHHHCTTCSEEEECCCGGGH
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCC---ceeCCHHHHhcCCCCCEEEEcCCCHHH
Confidence 57999999999999999999999999999999999999999999999985 689999999998899999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG 166 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~ 166 (362)
.++++.|+++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+..+.
T Consensus 81 ~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~i~~i~~~~~~~~ 159 (330)
T 3e9m_A 81 YSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATI-QEGGLGEILWVQSVTAYPN 159 (330)
T ss_dssp HHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHH-HTTTTCSEEEEEEEEEESC
T ss_pred HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHH-hCCCCCCeEEEEEEecccC
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999999988754
Q ss_pred CcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEeee
Q 018020 167 DAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSFL 246 (362)
Q Consensus 167 ~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~~ 246 (362)
....+|+.++.. |||.|.|+|+|.+|+++|++|. +|++|++.. ...+.+.+|++.++++|+||+++++++++.
T Consensus 160 ---~~~~~w~~~~~~-ggG~l~d~g~H~id~~~~l~G~-~~~~v~a~~--~~~~~~~~d~~~~~l~~~~G~~~~~~~s~~ 232 (330)
T 3e9m_A 160 ---VDHIPWFYSREA-GGGALHGSGSYPLQYLQYVLGK-EIQEVTGTA--TYQQGATDSQCNLALKFAEGTLGNIFINVG 232 (330)
T ss_dssp ---CTTCGGGGCTTT-TCSHHHHHSHHHHHHHHHHHTC-CEEEEEEEE--EECSSSCEEEEEEEEEETTTEEEEEEEEES
T ss_pred ---CCCcCcccCccc-CCCHHHHhhHHHHHHHHHHhCC-CceEEEEEE--EeCCCCcceEEEEEEEECCCCEEEEEEEec
Confidence 123578888887 4599999999999999999995 499999985 234567899999999999999999999999
Q ss_pred eCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhhhcC
Q 018020 247 ANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIKNG 326 (362)
Q Consensus 247 ~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g 326 (362)
.+...+++|+|++|++.+++... .....+....+ .........+ ..|..++.+|+++|++|
T Consensus 233 ~~~~~~~~i~G~~G~i~~~~~~~---~~~~~~~~~~g--------------~~~~~~~~~~--~~~~~e~~~f~~~i~~g 293 (330)
T 3e9m_A 233 LKIPSEMTICGTKGQIVIPNFWK---TDCAYYTDAQG--------------NTVKWSEQFT--SEFTYEINHVNQCLQDK 293 (330)
T ss_dssp CCCCCEEEEEETTEEEEEETTTT---CSEEEEECSSS--------------CEEEEECCCS--CHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEeCceEEEECCCCC---CCEEEEEECCC--------------ceEEEEEcCC--cccHHHHHHHHHHHHcC
Confidence 88888999999999999975321 11111111100 0001111111 12899999999999987
Q ss_pred CC-CCCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 327 SK-PEQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 327 ~~-~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
.. +...+.++++++++|++++++|+.++ +|.+.+|
T Consensus 294 ~~~~~~~~~~d~l~~~~i~~ai~~s~~~~-~~~~~~~ 329 (330)
T 3e9m_A 294 KLTSPVMTKELTIATVKIVESFYQEWFDN-EGHHHHH 329 (330)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHHHHTCC-C------
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCCC-ccccccC
Confidence 73 33345788999999999999999999 9998877
No 13
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=100.00 E-value=4.4e-56 Score=423.62 Aligned_cols=349 Identities=14% Similarity=0.137 Sum_probs=270.0
Q ss_pred CCceeEEEEEeccH---HHHHHHHHHhcCCCcEEEE-EEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-----CCCc
Q 018020 5 SQAAIRFGIIGAAD---IARKLSRAITLAPNAVLSA-VASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-----KDID 75 (362)
Q Consensus 5 ~~~~~~v~iiG~G~---~g~~~~~~~~~~~~~~vv~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-----~~~D 75 (362)
+|+++||||||+|. ||..|++.++..+++++++ |||+++++++++++++|++ ...+|+|+++||++ +++|
T Consensus 9 ~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~-~~~~~~~~~~ll~~~~~~~~~vD 87 (398)
T 3dty_A 9 IPQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVD-SERCYADYLSMFEQEARRADGIQ 87 (398)
T ss_dssp SCSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCC-GGGBCSSHHHHHHHHTTCTTCCS
T ss_pred ccCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCC-cceeeCCHHHHHhcccccCCCCC
Confidence 36789999999999 9999999999888899998 8999999999999999984 23689999999986 6799
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccce
Q 018020 76 AVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQL 155 (362)
Q Consensus 76 ~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i 155 (362)
+|+|+||+..|++++++||++||||+||||++.|++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|
T Consensus 88 ~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i-~~G~iG~i 166 (398)
T 3dty_A 88 AVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMI-AAGELGDV 166 (398)
T ss_dssp EEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHH-HTTTTCSE
T ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHH-hcCCCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred EEEEEEeeecC--Cc---ccccCccCcCCCCCC-CcccccccchHHHHHHHH-ccCCCCcEEEEeeccccCCC-CeeEee
Q 018020 156 RTMHSCFSFAG--DA---EFLKNDIRVKPDLDG-LGALGDAGWYGIRSILWA-NDYELPKTVIAMHGPVLNEA-GVILSC 227 (362)
Q Consensus 156 ~~i~~~~~~~~--~~---~~~~~~w~~~~~~~g-gg~l~~~g~h~id~~~~l-~g~~~~~~V~a~~~~~~~~~-~~~d~~ 227 (362)
..+++.+.... .+ .+...+|+.++..+| ||+|.|+|+|.+|+++|+ +|. +|++|++......... +.+|++
T Consensus 167 ~~v~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~idl~~~l~~G~-~~~~V~a~~~~~~~~~~~~~D~~ 245 (398)
T 3dty_A 167 RMVHMQFAHGFHSAPVEAQSQATQWRVDPRQAGPSYVLGDVGTHPLYLSEVMLPDL-KIKRLMCSRQSFVASRAPLEDNA 245 (398)
T ss_dssp EEEEEEEECCTTCC------------------CCCSHHHHTTHHHHHHHHHHCTTC-CEEEEEEEEECSSGGGTTSCSEE
T ss_pred EEEEEEEecccccCccccccCCCCcccCHHHcCCccHHHHHHHHHHHHHHHHhcCC-CcEEEEEEeEeecCCCCCcceEE
Confidence 99999985422 11 133567999888876 589999999999999999 884 5999999875444443 489999
Q ss_pred EEEEEeCCCcEEEEEEeeeeCC---ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccc--ccc----CCc
Q 018020 228 GASLHWDDGRVATFSCSFLANM---TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTG--WVP----LPS 298 (362)
Q Consensus 228 ~~~~~~~~G~~~~~~~~~~~~~---~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~ 298 (362)
.++++|+||+++++++++..+. ..+++|+|++|++.+++.. .....+..... .......+ +.. ...
T Consensus 246 ~~~l~~~~G~~~~~~~s~~~~~~~~~~~~~i~G~~G~i~~~~~~----~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 320 (398)
T 3dty_A 246 YTLMEYEGGAMGMVWSSAVNAGSMHGQKIRVIGSRASLEWWDER----PNQLSFEVQGQ-PAQILERGMGYLHPNALIDD 320 (398)
T ss_dssp EEEEEETTSCEEEEEEESCCTTCSCCEEEEEEESSEEEEEETTS----TTEEEEEETTS-CEEEEETTCTTSCGGGTTTC
T ss_pred EEEEEECCCCEEEEEEeccccCCCCCcEEEEEecceEEEEecCC----CCEEEEEECCC-CcEEEEcCCCCCChhhhhhc
Confidence 9999999999999999988763 3689999999999997421 11111111110 00000000 000 000
Q ss_pred ceeeecCCchhHHHHHHHHHHHHhhh---cCCC--C---CCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 299 EHVVTTDIPQEACMVREFSRLVANIK---NGSK--P---EQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~i~---~g~~--~---~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
...........+.|..++.+|+++|+ +|.+ | ...+.+|+++++++++|+++|+++| ++|.+.|
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~f~~~i~~~~~g~~~~p~~~~~~~~~dg~~~~~i~eA~~~S~~~g-~~v~~~~ 391 (398)
T 3dty_A 321 RIGGGHPEGLFEAWANLYYRFALAMDATDRSDTQALSAVRYPGIDAGVEGVRWVERCVLSADND-SIWVAYE 391 (398)
T ss_dssp CSCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCEESS
T ss_pred ccCCCCcCcHHHHHHHHHHHHHHHHHhhhCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeEEEec
Confidence 00000122356678999999999999 6765 1 2344788999999999999999999 8887754
No 14
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=100.00 E-value=3.1e-56 Score=418.88 Aligned_cols=338 Identities=19% Similarity=0.190 Sum_probs=269.4
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
|+++||||||+|.||..|++.+++.++++|++|||+++++++ .++++|+ ..|+|++++|+++++|+|+|+||+..
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~-~a~~~g~----~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKRE-AAAQKGL----KIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHH-HHHTTTC----CBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHH-HHHhcCC----ceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 358999999999999999999999999999999999999876 5677776 48999999999999999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeec
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFA 165 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~ 165 (362)
|.+++++||++||||+||||++.+++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..+++++...
T Consensus 78 h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~i~~~~~~~~~~ 156 (359)
T 3e18_A 78 HKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMF-EQKTIGEMFHLESRVHGA 156 (359)
T ss_dssp HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHH-HHTTTSSEEEEEEEEECS
T ss_pred HHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHH-HcCCCCCeEEEEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999887643
Q ss_pred CCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEee
Q 018020 166 GDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSF 245 (362)
Q Consensus 166 ~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~ 245 (362)
.. ...+|+..+.. |||.|+|+|+|.+|+++|++|. +|++|++..... ...+++|.+.++++|+||+++++++++
T Consensus 157 ~~---~~~~wr~~~~~-gGG~l~d~g~H~iD~~~~l~G~-~~~~v~a~~~~~-~~~~~~d~~~~~l~~~~G~~~~i~~s~ 230 (359)
T 3e18_A 157 NG---IPGDWRHLKAH-GGGMVLDWGVHLLDQLLFLVDS-NVKSVSANLSFA-LGDEVDDGFVTFITFENGITAQIEVGT 230 (359)
T ss_dssp SC---SCSSGGGCGGG-TCSHHHHTHHHHHHHHHHHCCS-CEEEEEEEEECT-TCCSSCSEEEEEEEETTSCEEEEEEES
T ss_pred CC---CCCCcccCcCC-CCcHHHHHhhHHHHHHHHHhCC-CCeEEEEEEEec-CCCCCCceEEEEEEECCCCEEEEEEee
Confidence 32 23568887776 5599999999999999999994 589999985433 344688999999999999999999988
Q ss_pred eeCCc-eeEEEEeccceEEEcceeccCCCCcceEEeccccc---cccc------ccccccCCcce-eeecCCchhHHHHH
Q 018020 246 LANMT-MDITATGTNGSLQLHDFIIPFREEEASYFTNTRCF---FNDL------VTGWVPLPSEH-VVTTDIPQEACMVR 314 (362)
Q Consensus 246 ~~~~~-~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~ 314 (362)
..... .+++|+|++|++.+++.... ........... .... ...+....... ...........|..
T Consensus 231 ~~~~~~~~~~i~G~~G~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
T 3e18_A 231 TNFIKLPRWYVKGTEGTGIIHDWDLS----GEIVKPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPS 306 (359)
T ss_dssp SCSSCCCSEEEEETTEEEEECSTTCC----EEEEEECTTTTTCCCCCEEETTEEESTTSCCCGGGEEEECCCCCCCCCSC
T ss_pred ccCCCCCeEEEEeeeEEEEEcCcCcc----chhhccccccccccCCccccccccccccCCcCCCcccceecCCCCCCHHH
Confidence 76543 57999999999999853211 00000000000 0000 00000000000 00011111234567
Q ss_pred HHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 315 EFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 315 ~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
++++|+++|++|.+|..+ .+|++++++|++|+++|+++| ++|.|.
T Consensus 307 ~~~~f~~ai~~~~~~~~~-~~dal~~~~ii~A~~~Sa~~g-~~V~l~ 351 (359)
T 3e18_A 307 FYNNFVDVLNNTSEPIVQ-NEEVYQVLKLIEAIFEAAETN-RTVHSI 351 (359)
T ss_dssp HHHHHHHHHTTSSCCSSC-HHHHHHHHHHHHHHHHHHHHT-SCEEC-
T ss_pred HHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHHHhhC-cEEEEe
Confidence 789999999987776555 778999999999999999999 999874
No 15
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=100.00 E-value=7.3e-56 Score=415.64 Aligned_cols=334 Identities=16% Similarity=0.150 Sum_probs=267.6
Q ss_pred CCceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 5 SQAAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
|++++||||||+|.+|.. |++.++++|+++|++|||+++++++ ++++ ++.+|+|++++|+++++|+|+|+||+
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~---~~~~~~~~~~ll~~~~vD~V~i~tp~ 77 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH---ADWP---AIPVVSDPQMLFNDPSIDLIVIPTPN 77 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---TTCS---SCCEESCHHHHHHCSSCCEEEECSCT
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH---hhCC---CCceECCHHHHhcCCCCCEEEEeCCh
Confidence 446899999999999996 9999999999999999999998776 3443 34789999999999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEee
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
..|++++++||++||||+||||++.+++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..+++.+.
T Consensus 78 ~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i-~~g~iG~i~~~~~~~~ 156 (352)
T 3kux_A 78 DTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLL-AEGSLGNVVYFESHFD 156 (352)
T ss_dssp TTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHH-HHTTTCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHH-hcCCCCceEEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999 8899999999999887
Q ss_pred ecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 164 FAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 164 ~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
...+. ...+|+.++.. |||.|.|+|+|.+|+++|++| +|++|++.........+.+|++.++++| +|..++++.
T Consensus 157 ~~~~~--~~~~w~~~~~~-ggG~l~d~g~H~id~~~~l~G--~p~~v~a~~~~~~~~~~~~d~~~~~l~~-~g~~~~~~~ 230 (352)
T 3kux_A 157 RYRPE--IRQRWREQAGA-GGGIWYDLGPHLLDQALQLFG--LPETLNVDLGMLRPGSQSVDYFHAVLSY-PGQRVVLHS 230 (352)
T ss_dssp CBCCS--SCSSCSCC----CBCHHHHHHHHHHHHHHHHHC--CCSEEEEEEECCSTTCCSBCEEEEEEEE-TTEEEEEEE
T ss_pred ccCCC--CCcccccCCCC-CCceeehhhhHHHHHHHHHhC--CCeEEEEEEEEecCCCCcccEEEEEEEE-CCEEEEEEE
Confidence 64432 24568887765 459999999999999999999 6999999976555566789999999999 899999999
Q ss_pred eeeeCC-ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCC----------cceeeecCCchhHHH
Q 018020 244 SFLANM-TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLP----------SEHVVTTDIPQEACM 312 (362)
Q Consensus 244 ~~~~~~-~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 312 (362)
++..+. ..+++|+|++|++.+++...... .+. .+ .......|.... ..............|
T Consensus 231 s~~~~~~~~~~~i~G~~G~~~~~~~~~~~~----~~~--~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (352)
T 3kux_A 231 TVLAAAETARYIVHGTQGSYIKFGVDPQED----RLK--AG--ERLPQADWGYDMRDGIVTLSHDNVLTEKPLLTLPGNY 302 (352)
T ss_dssp ESBCCSCCCSEEEEESSEEEEECSCCSHHH----HHH--TT--CCSCCTTTTCCCCCEEEEEESSSCEEEEEECCCCCCT
T ss_pred EeecCCCCCEEEEEeCCcEEEEeCCChhHH----HHh--cC--CCCCCcccCcCCCCCeeEeccCCcceeeeccCCCCCH
Confidence 988754 45799999999999864321000 000 00 000000111110 000000001112357
Q ss_pred HHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 313 VREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 313 ~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
..++.+|+++|++|.++.. +.++++++++|++|+++|+++| ++|+|+
T Consensus 303 ~~~~~~f~~ai~~~~~~~~-~~~d~~~~~~i~~a~~~Sa~~g-~~V~l~ 349 (352)
T 3kux_A 303 PAYYAGIRDAIWGTAPNPV-PATEAIKVMELIELGIASDQQK-KALPII 349 (352)
T ss_dssp HHHHHHHHHHHTTSSCCSS-BHHHHHHHHHHHHHHHHHHHHT-SCEECC
T ss_pred HHHHHHHHHHHhCCCCCCC-CHHHHHHHHHHHHHHHHHHhcC-CEEEee
Confidence 8899999999998876655 4788999999999999999999 999874
No 16
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=100.00 E-value=2.1e-56 Score=415.60 Aligned_cols=320 Identities=21% Similarity=0.295 Sum_probs=268.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
+++||||||+|.||..|++.+++.+++++++|||++++++++++++++++ ..|+|++++++++++|+|+|+||+..|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~---~~~~~~~~ll~~~~~D~V~i~tp~~~h 80 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLP---KAYDKLEDMLADESIDVIYVATINQDH 80 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCS---CEESCHHHHHTCTTCCEEEECSCGGGH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCC---cccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 58999999999999999999998899999999999999999999999975 689999999999899999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG 166 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~ 166 (362)
.++++.|+++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+.++.
T Consensus 81 ~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i-~~g~iG~i~~v~~~~~~~~ 159 (329)
T 3evn_A 81 YKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLL-ASGEIGEVISISSTTAYPN 159 (329)
T ss_dssp HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHH-HTTTTCSEEEEEEEEECTT
T ss_pred HHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHH-hCCCCCCeEEEEEEeccCC
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999999887643
Q ss_pred CcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEeee
Q 018020 167 DAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSFL 246 (362)
Q Consensus 167 ~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~~ 246 (362)
+...+|+.++.. |||+|.|+|+|.+|+++|++|. +|++|++.. .....+.+|++.++++|+||+++++++++.
T Consensus 160 ---~~~~~w~~~~~~-gGG~l~d~g~H~id~~~~l~G~-~~~~v~~~~--~~~~~~~~d~~~~~l~~~~G~~~~~~~s~~ 232 (329)
T 3evn_A 160 ---IDHVTWFRELEL-GGGTVHFMAPYALSYLQYLFDA-TITHASGTA--TFPKGQSDSQSKLLLQLSNGVLVDIFLTTR 232 (329)
T ss_dssp ---GGGSTTTTCGGG-TCSHHHHHHHHHHHHHHHHTTC-CEEEEEEEE--ECCTTSCCSEEEEEEEETTSCEEEEEEESS
T ss_pred ---CCCcccccCccc-CCcHHHHHHHHHHHHHHHHhCC-CceEEEEEE--EeCCCCcceEEEEEEEECCCCEEEEEEEcc
Confidence 234578887776 5599999999999999999994 477888875 234457899999999999999999999998
Q ss_pred eCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhhhcC
Q 018020 247 ANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIKNG 326 (362)
Q Consensus 247 ~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g 326 (362)
.+...+++|+|++|++.+++.... ....+....+ ... ....+..+.|..++.+|+++|++|
T Consensus 233 ~~~~~~~~i~G~~G~i~~~~~~~~---~~~~~~~~~g--------------~~~--~~~~~~~~~~~~e~~~f~~~i~~g 293 (329)
T 3evn_A 233 LNLPHEMIIYGTEGRLIIPHFWKT---THAKLVRNDT--------------SAR--TIQVDMVSDFEKEAYHVSQMILEG 293 (329)
T ss_dssp SCCCCEEEEEETTEEEEEETTTSC---SEEEEEESSS--------------CEE--EEECCCSCTTHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCceEEEECCCCCC---CeEEEEECCC--------------eeE--EEEcCCCCCCHHHHHHHHHHHHcC
Confidence 888889999999999999853211 1111111100 000 011222345789999999999987
Q ss_pred CC-CCCCchHhHHHHHHHHHHHHHHHhhCCcc
Q 018020 327 SK-PEQKWPIISRKTQLIIDAVKTSIERGFEP 357 (362)
Q Consensus 327 ~~-~~~~~~e~~l~~~~i~~a~~~S~~~g~~~ 357 (362)
.+ +...+.++++++++|++++++|++++ ++
T Consensus 294 ~~~~~~~~~~~~l~~~~ii~ai~~s~~~~-~~ 324 (329)
T 3evn_A 294 QRVSHIMTPQLTLSGVKIIEDLYRSWGKE-GH 324 (329)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHHHTTCC-C-
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhhhc-cc
Confidence 63 34445788999999999999999998 54
No 17
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=100.00 E-value=5.3e-56 Score=417.27 Aligned_cols=333 Identities=17% Similarity=0.168 Sum_probs=262.8
Q ss_pred ceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
+++||||||+|.+|.. |++.++++|+++|++|||+++++ ++++++. +.+|+|++++|+++++|+|+|+||+..
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~~~~~---~~~~~~~~~ll~~~~vD~V~i~tp~~~ 77 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE---VKRDFPD---AEVVHELEEITNDPAIELVIVTTPSGL 77 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH---HHHHCTT---SEEESSTHHHHTCTTCCEEEECSCTTT
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH---HHhhCCC---CceECCHHHHhcCCCCCEEEEcCCcHH
Confidence 5899999999999996 89999999999999999999865 5566742 478999999999999999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeec
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFA 165 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~ 165 (362)
|.+++++||++||||+||||++.+++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..+++.+...
T Consensus 78 H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~i~~~~~~~~~~ 156 (358)
T 3gdo_A 78 HYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLI-SEGSLEDINTYQVSYNRY 156 (358)
T ss_dssp HHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHH-HTTSSCSCCEEEEECCCB
T ss_pred HHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHH-hcCCCCceEEEEEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999987654
Q ss_pred CCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEee
Q 018020 166 GDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSF 245 (362)
Q Consensus 166 ~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~ 245 (362)
.+. ....|+..+.. |||.|.|+|+|.+|+++|++| +|++|++.........+.+|++.++++|+| ..+++.+++
T Consensus 157 ~~~--~~~~w~~~~~~-ggG~l~d~g~H~id~~~~l~G--~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~-~~~~~~~s~ 230 (358)
T 3gdo_A 157 RPE--VQARWREKEGT-ATGTLYDLGSHIIDQTLHLFG--MPKAVTANVMAQRENAETVDYFHLTLDYGK-LQAILYGGS 230 (358)
T ss_dssp CCC--C-----------CCSHHHHTHHHHHHHHHHHHC--CCSEEEEEEECCSTTCCSCCEEEEEEEETT-EEEEEEECS
T ss_pred CCC--CCcccccCCCC-CCceeeeehhHHHHHHHHHcC--CCeEEEEEEEeecCCCCcCceEEEEEEECC-EEEEEEEEe
Confidence 432 23458877655 569999999999999999999 799999997655555678999999999998 889999988
Q ss_pred eeCCc-eeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcc------------eeeecCCchhHHH
Q 018020 246 LANMT-MDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSE------------HVVTTDIPQEACM 312 (362)
Q Consensus 246 ~~~~~-~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 312 (362)
..+.. .+++|+|++|++.+++..... ..+.. . .......|...... ..........+.|
T Consensus 231 ~~~~~~~~~~i~G~~G~~~~~~~~~~~----~~~~~--~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (358)
T 3gdo_A 231 IVPANGPRYQIHGKDSSFIKYGIDGQE----DALRA--G--RKPEDDSWGADVPEFYGKLTTIRGSDKKTETIPSVNGSY 302 (358)
T ss_dssp BCSSCCCSEEEECSSEEEEECCCCSHH----HHHHT--T--CCCCSTTTTCCCGGGCEEEEEEETTEEEEEEECCCCCCT
T ss_pred ccCCCCCEEEEEeCceEEEEeCCChHH----HHHhc--C--CCCCccccCcCcccccceEEecCCCceeeeeecCCCCcH
Confidence 77654 479999999999986432100 00000 0 00000111111000 0000001122457
Q ss_pred HHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 313 VREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 313 ~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
..++.+|+++|++|.++..+ .++++++++|++|+++|+++| ++|+|.|
T Consensus 303 ~~~~~~f~~ai~~g~~~~~~-~~da~~~~~i~~a~~~Sa~~g-~~V~~~~ 350 (358)
T 3gdo_A 303 LTYYRKIAESIREGAALPVT-AEEGINVIRIIEAAMESSKEK-RTIMLEH 350 (358)
T ss_dssp HHHHHHHHHHHHHCCCCSSC-HHHHHHHHHHHHHHHHHHHHT-BCEECC-
T ss_pred HHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHHHhcC-CEEEeee
Confidence 88999999999988776654 777999999999999999999 9999875
No 18
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=5.2e-56 Score=418.10 Aligned_cols=338 Identities=19% Similarity=0.191 Sum_probs=261.8
Q ss_pred CCccCCceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEE
Q 018020 1 MATESQAAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i 79 (362)
|+| +++++||||||+|.+|.. |++.+++.|+++|++|||+++++++ ++++ ++.+|+|++++|+++++|+|+|
T Consensus 1 M~~-~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~---~~~~---~~~~~~~~~~ll~~~~~D~V~i 73 (364)
T 3e82_A 1 MSL-SNNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK---RDLP---DVTVIASPEAAVQHPDVDLVVI 73 (364)
T ss_dssp -------CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---HHCT---TSEEESCHHHHHTCTTCSEEEE
T ss_pred CCC-CCCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH---hhCC---CCcEECCHHHHhcCCCCCEEEE
Confidence 554 346899999999999996 9999999999999999999997755 4553 2478999999999999999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEE
Q 018020 80 PLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMH 159 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~ 159 (362)
+||+..|.+++++||++||||+||||++.+++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..++
T Consensus 74 ~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i-~~g~iG~i~~~~ 152 (364)
T 3e82_A 74 ASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVI-EQGTLGAVKHFE 152 (364)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH-HHTTTCSEEEEE
T ss_pred eCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHH-HcCCCcceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred EEeeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEE
Q 018020 160 SCFSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVA 239 (362)
Q Consensus 160 ~~~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~ 239 (362)
+.+....+.. ..+|+.++.. |||.|.|+|+|.+|+++|++| +|++|++.........+.+|++.++++|+| ..+
T Consensus 153 ~~~~~~~~~~--~~~w~~~~~~-ggG~l~d~g~H~id~~~~l~G--~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~-~~~ 226 (364)
T 3e82_A 153 SHFDRFRPEV--RVRWREQNVP-GSGLWFDLGPHLIDQALQLFG--LPQSVQGNIATLRDGAEINDWAHVVLNYPA-HKV 226 (364)
T ss_dssp EEEECBCCCC--------------CCHHHHHHHHHHHHHHHHHC--CCSEEEEEEECCSTTCCSCCEEEEEEECSS-CEE
T ss_pred EEeeccCCCC--CcccccCCCC-CCChHHhhhhHHHHHHHHHhC--CCeEEEEEEEeecCCCCcccEEEEEEEECC-EEE
Confidence 9887644322 3468877755 559999999999999999999 699999997555555678999999999998 889
Q ss_pred EEEEeeeeCCc-eeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCccee-------eecCCchhHH
Q 018020 240 TFSCSFLANMT-MDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHV-------VTTDIPQEAC 311 (362)
Q Consensus 240 ~~~~~~~~~~~-~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 311 (362)
++++++..+.. .+++|+|++|++.+++..... ..+. .+ .......|........ ........+.
T Consensus 227 ~~~~s~~~~~~~~~~~i~G~~G~~~~~~~~~~~----~~~~--~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (364)
T 3e82_A 227 ILHCSMLVAGGSSRFTVHGDKGSVIKARADQQE----SQLL--AG--VVPGSADWGQDDDPLVIYDASLQAHAQATPQGD 298 (364)
T ss_dssp EEEEESBCCSCCCSEEEEESSEEEEECSCCCHH----HHHH--HT--CCTTSTTTTCCCSCEEEEETTSCEEEECCCCCC
T ss_pred EEEEecccCCCCCEEEEEeCCEEEEEecCChhH----HHHh--cC--CCCCccccccCCCCceeecCCccceecCCCCCC
Confidence 99999877654 489999999999987432100 0000 00 0000011211100000 0000111235
Q ss_pred HHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 312 MVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 312 ~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
|..++.+|+++|++|.++.. +.++++++++|++|+++|+++| ++|+|++
T Consensus 299 ~~~~~~~f~~ai~~g~~~~~-~~~dal~~~~i~~A~~~Sa~~g-~~V~l~l 347 (364)
T 3e82_A 299 QRQYYMLIRDALKGQIANPV-PPVEALAVMAVLEAAVRSAESG-MVQTLDL 347 (364)
T ss_dssp THHHHHHHHHHHTTSSCCSS-CHHHHHHHHHHHHHHHHHHHHS-BCBCCCC
T ss_pred HHHHHHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHHHHHHhcC-CEEEEEc
Confidence 78899999999998877765 4788999999999999999999 9999864
No 19
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=100.00 E-value=3.9e-55 Score=411.11 Aligned_cols=323 Identities=18% Similarity=0.215 Sum_probs=268.8
Q ss_pred CceeEEEEEeccHHHHHHHHHHh-cCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARKLSRAIT-LAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~-~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|+++||||||+|.||..|++.+. +.+++++++|||+++++++++++++|+. +..|+|++++|+++++|+|+|+||+.
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~--~~~~~~~~~ll~~~~~D~V~i~tp~~ 98 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIE--AKDYNDYHDLINDKDVEVVIITASNE 98 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCC--CEEESSHHHHHHCTTCCEEEECSCGG
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCC--CeeeCCHHHHhcCCCCCEEEEcCCcH
Confidence 56899999999999999999998 7899999999999999999999999852 36899999999998999999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE-EEeeecccChhHHHHHHhhcCCCCccceEEEEEEee
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQL-MDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~-~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
.|.+++++|+++||||+||||++.+++++++|.++++++|+.+ ++++++||+|.++++|++| ++|.||+|..+++.+.
T Consensus 99 ~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~i~~v~~~~~ 177 (357)
T 3ec7_A 99 AHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNII-DSGEIGQPLMVHGRHY 177 (357)
T ss_dssp GHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHH-HHTTTCSEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHH-hcCCCCCeEEEEEEEe
Confidence 9999999999999999999999999999999999999999987 9999999999999999999 8999999999998765
Q ss_pred ecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeecccc-CCCCeeEeeEEEEEeCCCcEEEEE
Q 018020 164 FAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVL-NEAGVILSCGASLHWDDGRVATFS 242 (362)
Q Consensus 164 ~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~-~~~~~~d~~~~~~~~~~G~~~~~~ 242 (362)
.+..+ .+|+ +||.|.|+|+|.+|+++|++|. +|++|++...... ...+.+|.+.++++|+||++++++
T Consensus 178 ~~~~p----~~w~------ggg~l~d~g~H~iDl~~~l~G~-~~~~V~a~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~ 246 (357)
T 3ec7_A 178 NASTV----PEYK------TPQAIYETLIHEIDVMHWLLNE-DYKTVKVYFPRQSSLVTTLRDPQLVVMETTSGINIVVE 246 (357)
T ss_dssp CSCCC----TTCC------TTHHHHTTHHHHHHHHHHHHTC-CEEEEEEECCSCCTTCCSSCCSEEEEEEETTCCEEEEE
T ss_pred CCCCC----cccc------CCchhhhcccHHHHHHHHHcCC-CceEEEEEEecccccCCCcceeEEEEEEECCCCEEEEE
Confidence 44322 2343 5689999999999999999994 4899999853322 234678899999999999999999
Q ss_pred EeeeeCC--ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHH
Q 018020 243 CSFLANM--TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLV 320 (362)
Q Consensus 243 ~~~~~~~--~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (362)
+++..+. ..+++|+|++|++.+++.. ...+..... ........| .....+.|..++.+|+
T Consensus 247 ~s~~~~~~~~~~~~i~G~~G~i~~~~~~------~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~F~ 308 (357)
T 3ec7_A 247 VFVNCQYGYDIHCDVTGEKGMAELPTVA------SAAVRKAAK-YSTDILVDW-----------KQRFIDAYDIEFQDFF 308 (357)
T ss_dssp EETTCSSCCEEEEEEEESSEEEECCCCC------CCEEEETTE-EEEECCCCG-----------GGTSHHHHHHHHHHHH
T ss_pred EEeccCCCCCcEEEEEECCcEEEecCCC------cEEEEcCCC-cccccCCcc-----------hhhhhHHHHHHHHHHH
Confidence 9987764 3579999999999997421 111111110 000000011 1123567899999999
Q ss_pred HhhhcC-CCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 321 ANIKNG-SKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 321 ~~i~~g-~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
++|++| +++.+ +.+|++++++|++|+++|+++| ++|+|++
T Consensus 309 ~~i~~g~~~~~~-~~~d~~~~~~i~~a~~~Sa~~G-~~V~l~~ 349 (357)
T 3ec7_A 309 DRLNAGLPPAGP-TSWDGYLAAVTADACVKSQETG-NTEIVEL 349 (357)
T ss_dssp HHHHTTCCCCSS-CHHHHHHHHHHHHHHHHHHHHS-SCEECCC
T ss_pred HHHHcCCCCCCC-CHHHHHHHHHHHHHHHHHHHhC-CeEEEec
Confidence 999988 66655 4788999999999999999999 9999863
No 20
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=100.00 E-value=1.6e-55 Score=418.04 Aligned_cols=342 Identities=15% Similarity=0.151 Sum_probs=272.9
Q ss_pred CCceeEEEEEe-ccHHHHH-HH----HHHhcCCCcEEE---------EEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh
Q 018020 5 SQAAIRFGIIG-AADIARK-LS----RAITLAPNAVLS---------AVASRSLEKATNFAKANNFPPDAKVYGSYEALL 69 (362)
Q Consensus 5 ~~~~~~v~iiG-~G~~g~~-~~----~~~~~~~~~~vv---------~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l 69 (362)
+++++|||||| +|.+|.. |+ ..+++.++++++ ++||+++++++++++++|++ .+|+|+++||
T Consensus 3 ~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~---~~~~~~~~ll 79 (383)
T 3oqb_A 3 TTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIA---RWTTDLDAAL 79 (383)
T ss_dssp CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCC---CEESCHHHHH
T ss_pred CCceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCC---cccCCHHHHh
Confidence 35789999999 9999998 98 888888766654 79999999999999999986 6899999999
Q ss_pred cCCCCcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCC
Q 018020 70 DDKDIDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDP 149 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~ 149 (362)
+++++|+|+|+||+..|++++++||++||||+||||++.+++++++|.++|+++|+.+++++++||+|.++++|++| ++
T Consensus 80 ~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i-~~ 158 (383)
T 3oqb_A 80 ADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPGLKKIAFLR-DS 158 (383)
T ss_dssp HCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHH-HT
T ss_pred cCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHHHHHHHHHH-Hc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred CCccceEEEEEEeeecCCc-cc---ccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC------
Q 018020 150 QRFGQLRTMHSCFSFAGDA-EF---LKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN------ 219 (362)
Q Consensus 150 g~iG~i~~i~~~~~~~~~~-~~---~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~------ 219 (362)
|.||+|..+++.+.++... .| ...+|+.++.. |||.+.|+|+|.+|+++|++| +|++|++.......
T Consensus 159 g~iG~i~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~-ggG~l~d~g~H~id~~~~l~G--~~~~v~a~~~~~~~~~~~~~ 235 (383)
T 3oqb_A 159 GFFGRILSVRGEFGYWVFEGGWQEAQRPSWNYRDED-GGGIILDMVCHWRYVLDNLFG--NVQSVVCIGNTDIPERFDEQ 235 (383)
T ss_dssp TTTSSEEEEEEEEECCCCCSSSSCCSSCGGGGCTTT-TCCHHHHHHHHHHHHHHHHTC--CEEEEEEEEECSCSEEECTT
T ss_pred CCCCCcEEEEEEeccccccccccccCCCCccccccc-CCceeeehhhHHHHHHHHHcC--CCeEEEEEEeecccccccCC
Confidence 9999999999988653221 11 23467777665 559999999999999999999 69999998643322
Q ss_pred ----CCCeeEeeEEEEEeCCCcEEEEEEeeeeCCc----eeEEEEeccceEEEcceeccCC---CCcceEEecccccccc
Q 018020 220 ----EAGVILSCGASLHWDDGRVATFSCSFLANMT----MDITATGTNGSLQLHDFIIPFR---EEEASYFTNTRCFFND 288 (362)
Q Consensus 220 ----~~~~~d~~~~~~~~~~G~~~~~~~~~~~~~~----~~~~v~G~~G~i~~~~~~~~~~---~~~~~~~~~~~~~~~~ 288 (362)
..+.+|++.++++|+||++++++++|..+.. .+++|+|++|++.++....... ......+.........
T Consensus 236 g~~~~~~~~D~~~~~l~~~~G~~~~~~~s~~~~~~~~~~~~~~i~Gt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (383)
T 3oqb_A 236 GKKYKATADDSAYATFQLEGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVAGLSDCMIQARQATPRPVWNPDEKRLHD 315 (383)
T ss_dssp SCEEECCSCCEEEEEEEETTTEEEEEEEESSCCCCSSSSEEEEEEESSEEEEECSSCEEEEEGGGCCCCCCCC----CCC
T ss_pred CceeccccCCcEEEEEEeCCCCEEEEEEEeecccCCCCceEEEEEecccEEEEecccccccccCCCCccccCCCCCcccc
Confidence 2357899999999999999999999987542 4699999999999864211000 0000000000000000
Q ss_pred cccccccCCcceeeecCCchhHHHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 289 LVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
....|...+ ......+.|..++.+|+++|++|.++..+ .+|++++++|++|+++|+++| ++|+|.
T Consensus 316 ~~~~~~~~~------~~~~~~~~~~~~~~~F~~ai~~g~~~~~~-~~d~~~~~~i~~a~~~Sa~~g-~~V~l~ 380 (383)
T 3oqb_A 316 FYGDWQKLP------DNVSYDNGFKEQWEMFIRHVYEDAPYKFT-LLEGAKGVQLAECALKSWKER-RWIDVA 380 (383)
T ss_dssp GGGGSEECC------CCSCCCCHHHHHHHHHHHHHHHCCCCCCS-HHHHHHHHHHHHHHHHHHHHT-BCEECC
T ss_pred cccccccCC------CCCCccchHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHHHHHhhC-CeEecc
Confidence 001111100 01123456889999999999988877665 777999999999999999999 999874
No 21
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=100.00 E-value=1.3e-54 Score=406.04 Aligned_cols=320 Identities=19% Similarity=0.210 Sum_probs=267.9
Q ss_pred eeEEEEEeccHHHHHHHHHHh-cCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAADIARKLSRAIT-LAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~-~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
++||||||+|.||..|++.+. +.++++++++||+++++++++++++|++ +..|+|++++++++++|+|+|+||+..|
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~--~~~~~~~~~ll~~~~~D~V~i~tp~~~h 79 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLN--ATVYPNDDSLLADENVDAVLVTSWGPAH 79 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCC--CEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC--CeeeCCHHHHhcCCCCCEEEECCCchhH
Confidence 589999999999999999998 7899999999999999999999999852 3689999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE-EEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeec
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQL-MDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFA 165 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~-~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~ 165 (362)
.+++++|+++||||+||||++.+++++++|.++++++|+.+ ++++++||+|.++++|++| ++|.||+|..+++.+..+
T Consensus 80 ~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~i~~v~~~~~~~ 158 (344)
T 3mz0_A 80 ESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEAL-DNHVIGEPLMIHCAHRNP 158 (344)
T ss_dssp HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHH-HTTTTSSEEEEEEEEECS
T ss_pred HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHH-HcCCCCCcEEEEEEecCC
Confidence 99999999999999999999999999999999999999988 9999999999999999999 899999999999876544
Q ss_pred CCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC--CCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 166 GDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN--EAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 166 ~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~--~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
..+ .+|+ +||.|.|+|+|.+|+++|++|. +|++|++....... ..+.+|.+.++++|+||+++++++
T Consensus 159 ~~~----~~w~------ggg~l~d~g~H~id~~~~l~G~-~~~~V~a~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~~ 227 (344)
T 3mz0_A 159 TVG----DNYT------TDMAVVDTLVHEIDVLHWLVND-DYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEI 227 (344)
T ss_dssp CCC----TTCC------TTHHHHTTTHHHHHHHHHHHTC-CEEEEEEECCSCCTTSCTTCCCSEEEEEEETTCCEEEEEE
T ss_pred CCC----cccc------CCchhhhhhhHHHHHHHHhcCC-CcEEEEEEEeccccccCCCCCceEEEEEEECCCCEEEEEE
Confidence 322 2343 5689999999999999999994 48999998543322 346789999999999999999999
Q ss_pred eeeeCC--ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHH
Q 018020 244 SFLANM--TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVA 321 (362)
Q Consensus 244 ~~~~~~--~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (362)
++..+. ..+++|+|++|++.+++.. ...+..... ........| .....+.|..++.+|++
T Consensus 228 s~~~~~~~~~~~~i~G~~G~i~~~~~~------~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~f~~ 289 (344)
T 3mz0_A 228 YVNCKYGYDIQCEIVGEDGIIKLPEPS------SISLRKEGR-FSTDILMDW-----------QRRFVAAYDVEIQDFID 289 (344)
T ss_dssp ETTCSSCCEEEEEEEESSCEEECCCCC------CCEEEETTE-EEECCCSCH-----------HHHSHHHHHHHHHHHHH
T ss_pred EeccCCCCcceEEEEeCCCEEEEcCCC------cEEEEeCCC-ccccccCch-----------hhhhhHHHHHHHHHHHH
Confidence 987764 3479999999999997421 111111110 000000000 01224678999999999
Q ss_pred hh-hcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 322 NI-KNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 322 ~i-~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
+| ++|.++.++ .+|++++++|++|+++|+++| ++|+|+
T Consensus 290 ~i~~~g~~~~~~-~~d~~~~~~i~~a~~~Sa~~g-~~V~l~ 328 (344)
T 3mz0_A 290 SIQKKGEVSGPT-AWDGYIAAVTTDACVKAQESG-QKEKVE 328 (344)
T ss_dssp HHHHHSSCCSSC-HHHHHHHHHHHHHHHHHHHHC-SCEECC
T ss_pred HHHhCCCCCCCC-HHHHHHHHHHHHHHHHHHHhC-CcEEEe
Confidence 99 888777655 777999999999999999999 999986
No 22
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=100.00 E-value=1.1e-54 Score=404.80 Aligned_cols=323 Identities=23% Similarity=0.325 Sum_probs=267.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCC--CcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~--~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
++||||||+|.||..|++.+++.+ ++++++|||+++++++++++++|++ .+|+|++++|+++++|+|+|+||+..
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~---~~~~~~~~ll~~~~vD~V~i~tp~~~ 78 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIP---KAYGSYEELAKDPNVEVAYVGTQHPQ 78 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCS---CEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCC---cccCCHHHHhcCCCCCEEEECCCcHH
Confidence 589999999999999999999887 4799999999999999999999986 68999999999999999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeec
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFA 165 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~ 165 (362)
|++++++||++||||+||||++.+++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..+++.+...
T Consensus 79 H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~i~~v~~~~~~~ 157 (334)
T 3ohs_X 79 HKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVL-AQGTLGDLRVARAEFGKN 157 (334)
T ss_dssp HHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH-HHTTTCSEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHH-hcCCCCCeEEEEEEccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999998754
Q ss_pred CCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEee
Q 018020 166 GDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSF 245 (362)
Q Consensus 166 ~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~ 245 (362)
.+. .+|..++.. |||.|.|+|+|.+|+++|++|...|++|++... ..+.+.+|++.++++|+||+++++++++
T Consensus 158 ~~~----~~~~~~~~~-gGG~l~d~g~H~id~~~~l~G~~~p~~v~a~~~--~~~~~~~d~~~~~l~~~~G~~~~~~~s~ 230 (334)
T 3ohs_X 158 LTH----VPRAVDWAQ-AGGALLDLGIYCVQFISMVFGGQKPEKISVMGR--RHETGVDDTVTVLLQYPGEVHGSFTCSI 230 (334)
T ss_dssp CTT----CHHHHCTTT-TCSHHHHTHHHHHHHHHHHTTTCCCSEEEEEEE--ECTTSSEEEEEEEEEETTTEEEEEEEES
T ss_pred CCC----cCcCCCccc-CCCCHHHhhhHHHHHHHHHhCCCCCeEEEEEEE--ECCCCcceEEEEEEEeCCCCEEEEEEEe
Confidence 321 123345555 559999999999999999998546999999853 3345789999999999999999999999
Q ss_pred eeCCceeEEEEeccceEEE-cceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhhh
Q 018020 246 LANMTMDITATGTNGSLQL-HDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIK 324 (362)
Q Consensus 246 ~~~~~~~~~v~G~~G~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 324 (362)
..+...+++|+|++|++.+ ++.. ....+..... .. .+..+.... ...+...+.|..++.+|+++|+
T Consensus 231 ~~~~~~~~~i~G~~G~i~~~~~~~-----~~~~~~~~g~--~~----~~~~~~~~~--~~~~~~~~~~~~e~~~f~~~i~ 297 (334)
T 3ohs_X 231 TAQLSNTASVSGTKGMAQLLNPCW-----CPTELVVKGE--HK----EFLLPPVPK--NCNFDNGAGMSYEAKHVRECLR 297 (334)
T ss_dssp SSCCCCCEEEEETTEEEEECSSTT-----SCCEEEETTE--EE----ECCCCSCCC--SCSSTTGGGHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEeeeEEEEECCCCC-----CCeEEEECCe--EE----EEeCCCccc--ccccCCCCccHHHHHHHHHHHH
Confidence 8888888999999999999 3221 1111111111 00 011111000 1123345678999999999999
Q ss_pred cCC-CCCCCchHhHHHHHHHHHHHHHHHhhC
Q 018020 325 NGS-KPEQKWPIISRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 325 ~g~-~~~~~~~e~~l~~~~i~~a~~~S~~~g 354 (362)
+|+ ++...+.++++++++|++++++|+.-.
T Consensus 298 ~g~~~~~~~~~~~~l~~~~i~~~i~~~~g~~ 328 (334)
T 3ohs_X 298 KGLKESPVIPLVESELLADILEEVRRAIGVT 328 (334)
T ss_dssp TTCSSCSSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 886 344455788999999999999997543
No 23
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=100.00 E-value=1.1e-54 Score=417.41 Aligned_cols=339 Identities=20% Similarity=0.271 Sum_probs=277.5
Q ss_pred CCceeEEEEEeccHHHH-HHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCC-CCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 5 SQAAIRFGIIGAADIAR-KLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPP-DAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
+|+++||||||+|.||. .|++.+.+.++++|++|||+++++++.+++++|++. ++..|+|++++++++++|+|+|+||
T Consensus 80 ~~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp 159 (433)
T 1h6d_A 80 EDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILP 159 (433)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSC
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCC
Confidence 36789999999999997 899999988899999999999999999999999751 1237999999999889999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEe
Q 018020 83 TSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCF 162 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~ 162 (362)
+..|.++++.|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+
T Consensus 160 ~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~G~iG~i~~v~~~~ 238 (433)
T 1h6d_A 160 NSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLI-RENQLGKLGMVTTDN 238 (433)
T ss_dssp GGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH-HTTSSCSEEEEEEEE
T ss_pred chhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHH-HcCCCCCcEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999 899999999999987
Q ss_pred eecCCcccccCc-cCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEe-eccccC-C-CCeeEeeEEEEEeCCCcE
Q 018020 163 SFAGDAEFLKND-IRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAM-HGPVLN-E-AGVILSCGASLHWDDGRV 238 (362)
Q Consensus 163 ~~~~~~~~~~~~-w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~-~~~~~~-~-~~~~d~~~~~~~~~~G~~ 238 (362)
.+.... +.+.+ |+.++...|||.|.|+|+|.+|+++|++|. +|++|++. ...... . .+++|++.++++|+||.+
T Consensus 239 ~~~~~~-~~~~~~wr~~~~~~gGG~l~d~g~H~lD~~~~l~G~-~p~~V~a~~~~~~~~~~~~~veD~~~~~l~f~~G~~ 316 (433)
T 1h6d_A 239 SDVMDQ-NDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGE-EPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGAL 316 (433)
T ss_dssp ECCCCT-TSHHHHGGGCHHHHSSSHHHHTHHHHHHHHHHHHTS-CEEEEEEEEECCTTCGGGSSSCSEEEEEEEETTSCE
T ss_pred eccccc-CCCCcccccccccCCCCceecccchHHHHHHHHcCC-CCEEEEEEecccCCCccccccCceEEEEEEECCCCE
Confidence 764321 12345 888777746699999999999999999994 48999998 332221 1 267899999999999999
Q ss_pred EEEEEeeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHH
Q 018020 239 ATFSCSFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSR 318 (362)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
++++++|......+++|+|++|++.+++..... ............ ..++.. ....+..+.|..++.+
T Consensus 317 ~~l~~s~~~~~~~~~~I~Gt~G~i~~~~~~~~~---~~~~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~ 383 (433)
T 1h6d_A 317 SHGASSYSTTTTSRFSVQGDKAVLLMDPATGYY---QNLISVQTPGHA---NQSMMP-------QFIMPANNQFSAQLDH 383 (433)
T ss_dssp EEEEEESSSCCEEEEEEEESSCEEEESSSSCSS---CCCEEEEETTEE---EEECCC-------SSCCSSCCHHHHHHHH
T ss_pred EEEEEEeccCCCcEEEEEecCeEEEEECCcccc---ccEEEEeccccc---cCCcee-------eccCCCccHHHHHHHH
Confidence 999999887767789999999999997532111 111111100000 000000 0112234567899999
Q ss_pred HHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 319 LVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 319 ~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
|+++|++|.++..+ .+++++++++++++++|+++| ++|+++
T Consensus 384 F~~~I~~g~~~~~~-~~d~l~~~~ii~a~~~Sa~~g-~~V~l~ 424 (433)
T 1h6d_A 384 LAEAVINNKPVRSP-GEEGMQDVRLIQAIYEAARTG-RPVNTD 424 (433)
T ss_dssp HHHHHHTTCCCSSB-HHHHHHHHHHHHHHHHHHHHS-SCEECC
T ss_pred HHHHHhcCCCCCCC-HHHHHHHHHHHHHHHHHHhcC-CeEEcC
Confidence 99999988766554 778999999999999999998 999875
No 24
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=100.00 E-value=2e-54 Score=404.73 Aligned_cols=325 Identities=18% Similarity=0.233 Sum_probs=269.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
++||||||+|.||..|++.+.+.+++++++|||++++++++++++++++ ..|+|++++++++++|+|+|+||+..|.
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 78 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVE---KAYKDPHELIEDPNVDAVLVCSSTNTHS 78 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCS---EEESSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCC---ceeCCHHHHhcCCCCCEEEEcCCCcchH
Confidence 5899999999999999999999999999999999999999999999975 6899999999988999999999999999
Q ss_pred HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecCC
Q 018020 88 KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAGD 167 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~~ 167 (362)
+++..|+++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+..+.+
T Consensus 79 ~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~G~iG~i~~~~~~~~~~~~ 157 (344)
T 3ezy_A 79 ELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAV-ENGTIGKPHVLRITSRDPAP 157 (344)
T ss_dssp HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHH-HTTTTSSEEEEEEEEECSSC
T ss_pred HHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHH-HcCCCCCeEEEEEEeeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999999998654432
Q ss_pred cccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC----CCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 168 AEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN----EAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 168 ~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~----~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
+. |.+. . .+||.|.|+|+|.+|+++|++|. +|++|++....... ..+..|++.++++|+||++++++.
T Consensus 158 ~~-----~~~~-~-~~GG~l~d~g~H~lDl~~~l~G~-~~~~V~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~~ 229 (344)
T 3ezy_A 158 PP-----LDYI-R-VSGGIFLDMTIHDFDMARYIMGE-EVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVIDN 229 (344)
T ss_dssp CC-----HHHH-H-TTTCHHHHTHHHHHHHHHHHHSS-CEEEEEEEEECCSCHHHHHTTCCSEEEEEEEETTSCEEEEEE
T ss_pred CC-----cccc-c-CCCceEecccchHHHHHHHHcCC-CCeEEEEEeccccccccccCCCCceEEEEEEECCCCEEEEEE
Confidence 21 2211 1 35699999999999999999995 59999998643322 123458899999999999999999
Q ss_pred eeeeCCc--eeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHH
Q 018020 244 SFLANMT--MDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVA 321 (362)
Q Consensus 244 ~~~~~~~--~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (362)
++..+.. .+++|+|++|++.+++.. .....+....+. .. ..... .......+.|..++.+|++
T Consensus 230 s~~~~~~~~~~~~i~G~~G~i~~~~~~----~~~~~~~~~~g~-~~--------~~~~~--~~~~~~~~~~~~~~~~f~~ 294 (344)
T 3ezy_A 230 SRRAVYGYDQRIEVFGSKGRIFADNVR----ETTVVLTDEQGD-RG--------SRYLY--FFLERYRDSYLEELKTFIK 294 (344)
T ss_dssp ESCCTTSCEEEEEEEETTEEEEECCCB----SCSEEEEETTEE-EE--------CCBCC--SHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCCceEEEEEECcEEEEEccCC----CceEEEEcCCCc-cc--------CCCcc--chhhhhhHHHHHHHHHHHH
Confidence 9987654 579999999999998532 111111111100 00 00000 0011234678999999999
Q ss_pred hhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 322 NIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 322 ~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
+|++|.++..+ .+++++++++++|+++|+++| ++|+|.
T Consensus 295 ~i~~~~~~~~~-~~~~~~~~~i~~a~~~S~~~g-~~V~~~ 332 (344)
T 3ezy_A 295 NVKSGEPPAVS-GEDGKMALLLGYAAKKSLEEK-RSVKLE 332 (344)
T ss_dssp HHHHTCCCSSC-HHHHHHHHHHHHHHHHHHHHT-BCEEGG
T ss_pred HHhcCCCCCCC-HHHHHHHHHHHHHHHHHHHhC-CeEEec
Confidence 99988876665 777999999999999999998 999986
No 25
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=100.00 E-value=1e-55 Score=414.08 Aligned_cols=334 Identities=13% Similarity=0.064 Sum_probs=266.4
Q ss_pred eeEEEEEeccHHHH-HHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAADIAR-KLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~-~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
++||||||+|.+|. .|++.+++.|+++|++|||++ +++++++++++ +++..|+|++++|+++++|+|+|+||+..|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~-~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKE-KGVNFTADLNELLTDPEIELITICTPAHTH 78 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHT-TTCEEESCTHHHHSCTTCCEEEECSCGGGH
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCC-CCCeEECCHHHHhcCCCCCEEEEeCCcHHH
Confidence 69999999999998 699999999999999999998 67888888765 245789999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG 166 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~ 166 (362)
++++++||++||||+||||++.|++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|..+++.+.+..
T Consensus 79 ~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i-~~g~iG~i~~~~~~~~~~~ 157 (349)
T 3i23_A 79 YDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVV-EQGFLGEINEVETHIDYYR 157 (349)
T ss_dssp HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHH-HHTTTCSEEEEEEECCCBC
T ss_pred HHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHH-hcCCCCCEEEEEEEecccC
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999999876544
Q ss_pred CcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEeee
Q 018020 167 DAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSFL 246 (362)
Q Consensus 167 ~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~~ 246 (362)
+. .+|+..+ .+||.|.|+|+|.+|+++|++| +|++|++.........+.+|++.++++|+||..+++++++.
T Consensus 158 ~~----~~w~~~~--~ggG~l~d~g~H~id~~~~l~G--~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~~s~~ 229 (349)
T 3i23_A 158 PG----SITEQGP--KENGSFYGLGIHLMDRMIALFG--RPDQVTYDIRNNEVSEAVDNYFDVDLHYGSKLKVKVKTNHS 229 (349)
T ss_dssp TT----SCCSCCC--GGGSHHHHTHHHHHHHHHHHHC--CCSEEEECEECSSSTTSCCCEEEEEEEETTTEEEEEEECSB
T ss_pred Cc----hhhcccC--CCCCeehhhhhHHHHHHHHHhC--CCeEEEEEEEeeCCCCCcceEEEEEEEeCCCcEEEEEEecc
Confidence 32 4687766 4679999999999999999999 69999998655555567899999999999999999999987
Q ss_pred eCC-ceeEEEEeccceEEEcceeccCCCCcceEEeccccccccc-ccccc------cCCcceeeecCCchhHHHHHHHHH
Q 018020 247 ANM-TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDL-VTGWV------PLPSEHVVTTDIPQEACMVREFSR 318 (362)
Q Consensus 247 ~~~-~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
.+. ..+++|+|++|++.+.+...... ............+... ...|. ........ ......+.|..++++
T Consensus 230 ~~~~~~~~~i~G~~G~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 307 (349)
T 3i23_A 230 VASPYPRFIVHGSNGSFIKYGEDQQEN-DLKAGIMPDAPGFGEDSPMYYGEVTYRNGNGDWIKK-QIKTPVGDYGRYYDA 307 (349)
T ss_dssp CSSCCCSEEEEESSEEEEECSCCCHHH-HHTTTCCTTSTTTTCCCGGGCEEEEEECTTSCEEEE-EECCCCCCTTHHHHH
T ss_pred cCCCCCEEEEEecceEEEEcCCCchHH-HHhcCCCCCCCCCCCCchhhceEEEeccCCCceeee-ecCCCCCCHHHHHHH
Confidence 765 34799999999999865321000 0000000000000000 00000 00000000 001112357789999
Q ss_pred HHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcc
Q 018020 319 LVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEP 357 (362)
Q Consensus 319 ~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~ 357 (362)
|+++|++|+++..+ .++++++++|++|+++|+++| ++
T Consensus 308 f~~ai~~g~~~~~~-~~da~~~~~ii~a~~~Sa~~G-r~ 344 (349)
T 3i23_A 308 VYETLKNGAPQLVT-KEQALTNIEILEAGFLNPSPS-VY 344 (349)
T ss_dssp HHHHHHHCCCCSSC-HHHHHHHHHHHHHTTTSCSSE-EE
T ss_pred HHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhHHHH-Hh
Confidence 99999988776654 788999999999999999998 54
No 26
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=100.00 E-value=6e-55 Score=410.25 Aligned_cols=324 Identities=15% Similarity=0.113 Sum_probs=259.6
Q ss_pred CCceeEEEEEeccHHHH-HHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 5 SQAAIRFGIIGAADIAR-KLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
||+++||||||+|.++. .+++.++ .++++|++|||++++++++++++++.+ .+|+|++++|+++++|+|+|+||+
T Consensus 23 Mm~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~~~~~a~~~a~~~~~~---~~~~~~~~ll~~~~vD~V~I~tp~ 98 (361)
T 3u3x_A 23 MMDELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEKDDALAAEFSAVYADA---RRIATAEEILEDENIGLIVSAAVS 98 (361)
T ss_dssp ---CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECSCHHHHHHHHHHSSSC---CEESCHHHHHTCTTCCEEEECCCH
T ss_pred hccCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcCCHHHHHHHHHHcCCC---cccCCHHHHhcCCCCCEEEEeCCh
Confidence 35689999999999985 4677776 479999999999999999999999854 689999999999999999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeeccc-ChhHHHHHHhhcCCCCccceEEEEEEe
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVH-NPRTAQMKEFVSDPQRFGQLRTMHSCF 162 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~-~p~~~~~k~~i~~~g~iG~i~~i~~~~ 162 (362)
..|++++++||++||||+||||++.+++++++|.++|+++|+.+++++++|| .|.++++|++| ++|.||+|..+++.+
T Consensus 99 ~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~i-~~g~iG~i~~~~~~~ 177 (361)
T 3u3x_A 99 SERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELV-AAGAIGEVVHIVGLG 177 (361)
T ss_dssp HHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHHH-HTTTTSSEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHHH-HcCCCCCeEEEEEec
Confidence 9999999999999999999999999999999999999999999999999999 59999999999 899999999999876
Q ss_pred eecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC--CCCeeEeeEEEEEeCCCcEEE
Q 018020 163 SFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN--EAGVILSCGASLHWDDGRVAT 240 (362)
Q Consensus 163 ~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~--~~~~~d~~~~~~~~~~G~~~~ 240 (362)
.+...+ +...+|+.++..+ ||.|.|+|+|.+|+++|++|...++.|++....... ..+.+|++.++++|+||+ ++
T Consensus 178 ~~~~~~-~~~~~w~~~~~~~-GG~l~d~g~H~iD~~~~l~G~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~~~~G~-~~ 254 (361)
T 3u3x_A 178 PHRLRR-ETRPDWFFRRADY-GGILTDIASHQCEQFLFFTGVNDATVLSASVGNQSVPDAPELQDTGSIHLSTGRTT-GM 254 (361)
T ss_dssp ECCCCG-GGSCGGGTCHHHH-CCHHHHHSHHHHHHHHHHHCCSCCEEEEEEEECCSCTTSTTSCCEEEEEEECSSCE-EE
T ss_pred ccccCC-CCCCCcccCcCcc-CchHHhhhhHHHHHHHHHhCCCCeEEEEEEeecccCCCCCCCCceEEEEEEECCce-EE
Confidence 554332 2345788877764 499999999999999999995434557887543332 347899999999999999 99
Q ss_pred EEEeeeeCCc------eeEEEEeccceEEEcceeccC-CCCcceEEecccccccccccccccCCcceeeecCCchhHHHH
Q 018020 241 FSCSFLANMT------MDITATGTNGSLQLHDFIIPF-REEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMV 313 (362)
Q Consensus 241 ~~~~~~~~~~------~~~~v~G~~G~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (362)
++++|..+.. .+++|+|++|++.+++..... .............. ... ... . ..+.
T Consensus 255 ~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~l~~~~~~g------------~~~-~~~--~--~~~~ 317 (361)
T 3u3x_A 255 IHVNWLTPEGMPTWGDGRLFIVGTSGTIEVRKTVDLAGREGGNHLFLADRNG------------VEH-IDC--S--RVDL 317 (361)
T ss_dssp EEEESCCCTTCSSSCCCEEEEEESSCEEEEECSCCTTSSSSSCEEEEECSSC------------EEE-EEC--T--TSCC
T ss_pred EEEEeecCCCCCCCCCceEEEEeCCeEEEEeccccccccCCCceEEEECCCC------------cee-cCc--c--ccCC
Confidence 9999988653 489999999999998542111 01111121111110 000 001 0 1123
Q ss_pred HHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhC
Q 018020 314 REFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 314 ~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g 354 (362)
.++.+|+++|++|.+|..+ .++++++++|++|+++|+++.
T Consensus 318 ~~~~~F~~ai~~~~~~~~~-~~d~l~~l~i~~a~~~Sa~~~ 357 (361)
T 3u3x_A 318 PFGRQFLADIRDRTETAMP-QERCFKAMELALQAQAIAEQN 357 (361)
T ss_dssp THHHHHHHHHHHSCCSSSC-HHHHHHHHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHcCCCCCCC-HHHHHHHHHHHHHHHHHHHHh
Confidence 5679999999988776554 788999999999999999987
No 27
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=100.00 E-value=1.7e-53 Score=396.72 Aligned_cols=326 Identities=20% Similarity=0.238 Sum_probs=271.6
Q ss_pred eEEEEEeccHHHHHH-HHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 9 IRFGIIGAADIARKL-SRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~-~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
|||||||+|.||..+ ++.+.+ ++++++++||+++++++++++++|++ ..|+|++++++++++|+|+|+||+..|.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~---~~~~~~~~~l~~~~~D~V~i~tp~~~h~ 76 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIG---KSVTSVEELVGDPDVDAVYVSTTNELHR 76 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCS---CCBSCHHHHHTCTTCCEEEECSCGGGHH
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCC---cccCCHHHHhcCCCCCEEEEeCChhHhH
Confidence 589999999999997 888888 89999999999999999999999874 5799999999988899999999999999
Q ss_pred HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecCC
Q 018020 88 KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAGD 167 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~~ 167 (362)
+++..|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+..+.+
T Consensus 77 ~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i-~~g~iG~i~~v~~~~~~~~~ 155 (332)
T 2glx_A 77 EQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAI-AEGRIGRPIAARVFHAVYLP 155 (332)
T ss_dssp HHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHH-HTTTTSSEEEEEEEEECBCC
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHH-HcCCCCCeEEEEEEEcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999999998876543
Q ss_pred cccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccc-cCCCCeeEeeEEEEEeCCCcEEEEEEeee
Q 018020 168 AEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPV-LNEAGVILSCGASLHWDDGRVATFSCSFL 246 (362)
Q Consensus 168 ~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~-~~~~~~~d~~~~~~~~~~G~~~~~~~~~~ 246 (362)
+...+|+.++...|||.|.|+|+|.+|+++|++|. +|++|++..... ....+.+|++.++++|+||.++++++++.
T Consensus 156 --~~~~~w~~~~~~~ggG~l~d~g~H~id~~~~l~G~-~~~~V~a~~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~~s~~ 232 (332)
T 2glx_A 156 --PHLQGWRLERPEAGGGVILDITVHDADTLRFVLND-DPAEAVAISHSAGMGKEGVEDGVMGVLRFQSGVIAQFHDAFT 232 (332)
T ss_dssp --GGGTTGGGSCTTTTCSHHHHTHHHHHHHHHHHHTS-CEEEEEEEEECCSSSCTTCCSEEEEEEEETTSCEEEEEEESB
T ss_pred --CCCCCcccccCCCCCchHhhhhHHHHHHHHHHcCC-CCcEEEEEEecCCCCCCCccceEEEEEEECCCcEEEEEEEee
Confidence 23457888755556799999999999999999995 599999985433 33457889999999999999999999988
Q ss_pred eC-CceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhhhc
Q 018020 247 AN-MTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIKN 325 (362)
Q Consensus 247 ~~-~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 325 (362)
.+ ...+++|+|++|++.+.+..... ............. . ....+..+.|..++.+|+++|++
T Consensus 233 ~~~~~~~~~i~G~~G~i~~~~~~~~~--~~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~f~~~i~~ 295 (332)
T 2glx_A 233 TKFAETGFEVHGTEGSLIGRNVMTQK--PVGTVTLRNAEGE-------------S--QLPLDPANLYETALAAFHSAIEG 295 (332)
T ss_dssp CSSCCCEEEEEESSCEEEEESCSSSS--SCCEEEEEETTEE-------------E--ECCCCCCCHHHHHHHHHHHHHTT
T ss_pred cCCCCceEEEEECceEEEeecccCCC--CCceEEEEcCCCc-------------e--EEecCCcchHHHHHHHHHHHHhc
Confidence 54 45689999999999765421110 0001111111000 0 01112223678899999999997
Q ss_pred CCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 326 GSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 326 g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
|.++.. +.+++++++++++|+++|+++| ++|+++
T Consensus 296 ~~~~~~-~~~~~~~~~~i~~a~~~S~~~g-~~v~~~ 329 (332)
T 2glx_A 296 HGQPSA-TGEDGVWSLATGLAVVKAAATG-QAAEIE 329 (332)
T ss_dssp SSCCSS-BHHHHHHHHHHHHHHHHHHHHS-SCEECC
T ss_pred CCCCCC-CHHHHHHHHHHHHHHHHHhhcC-ceEecC
Confidence 776555 5788999999999999999999 999874
No 28
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.6e-54 Score=403.98 Aligned_cols=325 Identities=18% Similarity=0.161 Sum_probs=269.6
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
+++||||||+|.||..|++.+.+.|+++++++||+++++++++++++|. ..|+|++++++++++|+|+|+||+..|
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~----~~~~~~~~~l~~~~~D~V~i~tp~~~h 78 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA----EAVASPDEVFARDDIDGIVIGSPTSTH 78 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC----EEESSHHHHTTCSCCCEEEECSCGGGH
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC----ceeCCHHHHhcCCCCCEEEEeCCchhh
Confidence 4799999999999999999999999999999999999999999999984 689999999998899999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG 166 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~ 166 (362)
.+++..|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+..+.
T Consensus 79 ~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~i~~v~~~~~~~~ 157 (344)
T 3euw_A 79 VDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARV-ANQEIGNLEQLVIISRDPA 157 (344)
T ss_dssp HHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHH-HTTTTSSEEEEEEEEECSS
T ss_pred HHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHH-hcCCCCceEEEEEEecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999998876543
Q ss_pred CcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC----CCCeeEeeEEEEEeCCCcEEEEE
Q 018020 167 DAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN----EAGVILSCGASLHWDDGRVATFS 242 (362)
Q Consensus 167 ~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~----~~~~~d~~~~~~~~~~G~~~~~~ 242 (362)
++ +..|+ ..+||.|.|+|+|.+|+++|++| +|++|++....... +.+.+|.+.++++|+||++++++
T Consensus 158 ~~---~~~~~----~~~gG~l~d~g~H~ld~~~~l~G--~~~~v~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~ 228 (344)
T 3euw_A 158 PA---PKDYI----AGSGGIFRDMTIHDLDMARFFVP--NIVEVTATGANVFSQEIAEFNDYDQVIVTLRGSKGELINIV 228 (344)
T ss_dssp CC---CHHHH----HHSCHHHHHTHHHHHHHHHHHCS--CEEEEEEEEECSSCHHHHHTTCCSEEEEEEEETTSCEEEEE
T ss_pred CC---Ccccc----cCCCceeecchhhHHHHHHHhcC--CcEEEEEEecccccccccccCCCceEEEEEEECCCcEEEEE
Confidence 22 12232 23569999999999999999999 79999999644322 23456889999999999999999
Q ss_pred EeeeeCC--ceeEEEEeccceEEEcceeccCCCCcceEEeccccccccccccccc-CCcceeeecCCchhHHHHHHHHHH
Q 018020 243 CSFLANM--TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVP-LPSEHVVTTDIPQEACMVREFSRL 319 (362)
Q Consensus 243 ~~~~~~~--~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 319 (362)
+++..+. ..+++|+|++|++.+++.. .....+.. .. ++.. ...... ......+.|..++.+|
T Consensus 229 ~s~~~~~~~~~~~~i~G~~G~i~~~~~~----~~~l~~~~--~~-------g~~~~~~~~~~--~~~~~~~~~~~~~~~f 293 (344)
T 3euw_A 229 NSRHCSYGYDQRLEAFGSKGMLAADNIR----PTTVRKHN--AE-------STEQADPIFNF--FLERYDAAYKAELATF 293 (344)
T ss_dssp EESCCTTSCEEEEEEEETTEEEEECCCC----SSCEEEES--SS-------CBSEECCCCCS--HHHHTHHHHHHHHHHH
T ss_pred EEeccCCCCceEEEEEECcEEEEEcCCC----CceEEEEc--CC-------CccccCCcccc--chhhhhHHHHHHHHHH
Confidence 9998765 4579999999999998521 11111111 11 0000 000000 0012346789999999
Q ss_pred HHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 320 VANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 320 ~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
+++|++|.++.. +.++++++++|++|+++|+++| ++|++.+
T Consensus 294 ~~~i~~~~~~~~-~~~d~~~~~~i~~a~~~Sa~~g-~~V~~~~ 334 (344)
T 3euw_A 294 AQGIRDGQGFSP-NFEDGVIALELANACLESAQTG-RTVTLNP 334 (344)
T ss_dssp HHHHHHCSCCSS-BHHHHHHHHHHHHHHHHHHHHT-BCEESSC
T ss_pred HHHHhcCCCCCC-CHHHHHHHHHHHHHHHHHHHhC-CeEECCC
Confidence 999998887655 4788999999999999999999 9999863
No 29
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=100.00 E-value=1.6e-55 Score=410.89 Aligned_cols=316 Identities=17% Similarity=0.178 Sum_probs=257.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH-H---HHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL-E---KATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~-~---~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
++||||||+|.++..|++.+ .++++|++|||+++ + +..++++++++. +..|+|+++||+++++|+|+|+||+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~~vD~V~I~tp~ 77 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAISEMNIK--PKKYNNWWEMLEKEKPDILVINTVF 77 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHHTTTCC--CEECSSHHHHHHHHCCSEEEECSSH
T ss_pred ceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHHHcCCC--CcccCCHHHHhcCCCCCEEEEeCCc
Confidence 59999999999888999888 88999999999887 3 444455567863 3789999999998899999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE--EEEeeecccChhHHHHHHhhcCCCCccceEEEEEE
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ--LMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSC 161 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~--~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~ 161 (362)
..|++++++||++||||+||||++.|++++++|.++++++|+. +++++++||+|.++++|++| ++|.||+|..+++.
T Consensus 78 ~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~i~~i~~~ 156 (337)
T 3ip3_A 78 SLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLV-SEGAVGEIRLVNTQ 156 (337)
T ss_dssp HHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHH-HHTTTSSEEEEEEE
T ss_pred chHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHH-hcCCccceEEEEEE
Confidence 9999999999999999999999999999999999999999998 99999999999999999999 89999999999998
Q ss_pred eeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC--CCCeeEeeEEEEEeCCCcEE
Q 018020 162 FSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN--EAGVILSCGASLHWDDGRVA 239 (362)
Q Consensus 162 ~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~--~~~~~d~~~~~~~~~~G~~~ 239 (362)
+...... ..+|+..+.. +||.+.|+|+|.+|+++|++|. +|++|++....... ..+.+|++.++++|+||+++
T Consensus 157 ~~~~~~~---~~~~~~~~~~-~gG~l~d~g~H~iD~~~~l~G~-~~~~V~a~~~~~~~~~~~~~~d~~~~~l~~~~G~~~ 231 (337)
T 3ip3_A 157 KSYKLGQ---RPDFYKKRET-YGGTIPWVGIHAIDWIHWITGK-KFLSVYATHSRLHNSGHGELETTALCHFTLENEVFA 231 (337)
T ss_dssp EEBCCCS---CCGGGGSHHH-HCCHHHHTTHHHHHHHHHHHCC-CEEEEEEEEECTTCTTCTTCCSEEEEEEEEGGGEEE
T ss_pred ecccCCC---Ccchhhcccc-cCCchhhcchHHHHHHHHhcCC-CceEEEEEecccccCCCCCcceEEEEEEEECCCcEE
Confidence 7654322 1245444443 4599999999999999999994 48999998644332 35688999999999999999
Q ss_pred EEEEeeeeC------CceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHH
Q 018020 240 TFSCSFLAN------MTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMV 313 (362)
Q Consensus 240 ~~~~~~~~~------~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (362)
+++++|..+ ...+++|+|++|++.+.+... ..... ... .. ... ..+.
T Consensus 232 ~~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~-------~~~~~--~~~------------~~---~~~---~~~~ 284 (337)
T 3ip3_A 232 SLSIDYLRPQGAPTHDDDRMRIVGTRGIVEVINERV-------FLTDE--KGH------------RE---VPL---VEKG 284 (337)
T ss_dssp EEEEESCCCTTSSSSBCCEEEEEESSCEEEEETTEE-------EEEET--TEE------------EE---ECC---CCCC
T ss_pred EEEEEEEcCCCCCCCCCcEEEEEecceEEEEeCCEE-------EEecC--CCc------------ee---ccC---CchH
Confidence 999998765 245799999999999864211 11110 000 00 001 1124
Q ss_pred HHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeecC
Q 018020 314 REFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIKW 362 (362)
Q Consensus 314 ~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~~ 362 (362)
.++.+|+++|++|+++.. +.+++++++++++|+++|+++| ++|.+.|
T Consensus 285 ~~~~~f~~~i~~~~~~~~-~~~d~~~~~~i~~a~~~Sa~~g-~~V~~~~ 331 (337)
T 3ip3_A 285 QIFEDFLREIRGQGKCMV-TPEDSILTTEIALKARLSADTG-QIVLIEG 331 (337)
T ss_dssp CHHHHHHHHHTTSSCCSS-CHHHHHHHHHHHHHHHHHHHHT-SCEEC--
T ss_pred HHHHHHHHHhcCCCCCCC-CHHHHHHHHHHHHHHHHHHHhC-CeEEeec
Confidence 578999999998776655 4788999999999999999999 9999875
No 30
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.6e-54 Score=398.10 Aligned_cols=323 Identities=21% Similarity=0.236 Sum_probs=267.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
++||||||+|.||..|++.+.+.++++++++||+++++++++++++|+ . |+|++++++++++|+|+|+||+..|.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~----~-~~~~~~~l~~~~~D~V~i~tp~~~h~ 77 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGC----E-VRTIDAIEAAADIDAVVICTPTDTHA 77 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTC----E-ECCHHHHHHCTTCCEEEECSCGGGHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCC----C-cCCHHHHhcCCCCCEEEEeCCchhHH
Confidence 699999999999999999999999999999999999999999999986 4 99999999988999999999999999
Q ss_pred HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecCC
Q 018020 88 KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAGD 167 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~~ 167 (362)
+++..|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+..+.+
T Consensus 78 ~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i-~~g~iG~i~~~~~~~~~~~~ 156 (331)
T 4hkt_A 78 DLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAI-DDGRIGEVEMVTITSRDPSA 156 (331)
T ss_dssp HHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHH-HTTTTCSEEEEEEEEECSSC
T ss_pred HHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHH-HcCCCCceEEEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999999987654332
Q ss_pred cccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC----CCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 168 AEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN----EAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 168 ~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~----~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
+. ..|. . .+||.|.|+|+|.+|+++|++|. +|++|++....... +.+.+|++.++++|+||+++++++
T Consensus 157 ~~---~~~~---~-~~gG~l~d~g~H~ld~~~~l~G~-~~~~v~a~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~~ 228 (331)
T 4hkt_A 157 PP---VDYI---K-RSGGIFRDMTIHDFDMARFLLGE-EPVSVTATAAVLIDKAIGDAGDYDSVSVILQTASGKQAIISN 228 (331)
T ss_dssp CC---HHHH---H-TTTCHHHHTHHHHHHHHHHHHCS-CEEEEEEEEECCSCHHHHHTTCCSEEEEEEEETTCCEEEEEE
T ss_pred Cc---hhhh---h-cCCCeeehheehHHHHHHHHhCC-CccEEEEEeccccccccccCCCcceEEEEEEECCCCEEEEEE
Confidence 11 1122 1 35699999999999999999994 69999998643322 235678899999999999999999
Q ss_pred eeeeCC--ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHH
Q 018020 244 SFLANM--TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVA 321 (362)
Q Consensus 244 ~~~~~~--~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (362)
++..+. ..+++|+|++|++.+++.. .....+..... . ........ ......+.|..++.+|++
T Consensus 229 s~~~~~~~~~~~~i~G~~G~i~~~~~~----~~~~~~~~~~~--~-------~~~~~~~~--~~~~~~~~~~~~~~~f~~ 293 (331)
T 4hkt_A 229 SRRATYGYDQRIEVHGSKGAVAAENQR----PVSIEIATGDG--Y-------TRPPLHDF--FMTRYTEAYANEIESFIA 293 (331)
T ss_dssp ESCCTTCCEEEEEEEESSCEEEECCCC----SCCEEEEETTE--E-------EECCCCSS--HHHHTHHHHHHHHHHHHH
T ss_pred ecccCCCCccEEEEEeCceEEEeccCC----CccEEEEcCCC--c-------ccCCCCcc--chhhhhHHHHHHHHHHHH
Confidence 988765 4579999999999997532 11111111100 0 00000000 001234678999999999
Q ss_pred hhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 322 NIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 322 ~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
+|++|.++.. +.+++++++++++|+++|+++| ++|+|.
T Consensus 294 ~i~~~~~~~~-~~~d~~~~~~i~~a~~~S~~~g-~~V~la 331 (331)
T 4hkt_A 294 AIEKGAEIAP-SGNDGLAALALADAAVRSVAEK-RQISIA 331 (331)
T ss_dssp HHHTTCCCSS-CHHHHHHHHHHHHHHHHHHHHT-BCEECC
T ss_pred HHhCCCCCCC-CHHHHHHHHHHHHHHHHHHhcC-CeEecC
Confidence 9998877655 4788999999999999999999 999974
No 31
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=100.00 E-value=9e-55 Score=408.92 Aligned_cols=327 Identities=14% Similarity=0.161 Sum_probs=265.2
Q ss_pred CceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|+++||||||+|.||.. |++.+.+.|++++++|||++++++++++++++.. .+|+|++++|+++++|+|+|+||+.
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~---~~~~~~~~ll~~~~vD~V~i~tp~~ 79 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDI---PVLDNVPAMLNQVPLDAVVMAGPPQ 79 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSC---CEESSHHHHHHHSCCSEEEECSCHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCC---cccCCHHHHhcCCCCCEEEEcCCcH
Confidence 35899999999999985 8999999999999999999999999999998643 6899999999988999999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeee
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSF 164 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~ 164 (362)
.|.+++++|+++||||+||||++.+++++++|.++++++|+++++++++||.|.++++|++| ++|.||+|..+++.+..
T Consensus 80 ~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~i~~~~~~~~~ 158 (359)
T 3m2t_A 80 LHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMT-QVDEFGETLHIQLNHYA 158 (359)
T ss_dssp HHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHHHHHHHHHH-TSGGGCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHHHHHHHHHH-HCCCCCCeEEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999 89999999999988765
Q ss_pred cCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEe
Q 018020 165 AGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCS 244 (362)
Q Consensus 165 ~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~ 244 (362)
..+. ...|+.++. +||.+.|+++|.+|+++|++|. +|++|++.... .+.+|.+.++++|+||++++++++
T Consensus 159 ~~~~---~~~w~~~~~--~gg~l~d~~~H~iD~~~~l~G~-~~~~V~a~~~~----~~~~d~~~~~l~~~~G~~~~~~~s 228 (359)
T 3m2t_A 159 NKPR---APLWGLDST--LRSFLLAQAIHTIDLAITFGDG-ELRRVQSSVQR----HDDALIVRADMAFSSGATASLLAG 228 (359)
T ss_dssp CCCS---SCCTTCSCH--HHHHHHHTHHHHHHHHHHHHCS-CEEEEEEEEEE----ETTEEEEEEEEEETTSCEEEEEEE
T ss_pred CCCC---CCCcccCCC--ccchhhhcccHHHHHHHHHhCC-CceEEEEEeec----cCCCeEEEEEEEECCCCEEEEEEe
Confidence 4322 345776655 4589999999999999999984 69999998532 234788999999999999999999
Q ss_pred eeeCC-ceeEEEEeccceEE-EcceeccCCCCcceEEeccc-----ccccccccccccCCcceeeecCCchhHHHHHHHH
Q 018020 245 FLANM-TMDITATGTNGSLQ-LHDFIIPFREEEASYFTNTR-----CFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFS 317 (362)
Q Consensus 245 ~~~~~-~~~~~v~G~~G~i~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (362)
|..+. ..+++|+|++|.+. .++... ........ .........|...+.. . ......|..+++
T Consensus 229 ~~~~~~~~~~~i~g~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~ei~ 297 (359)
T 3m2t_A 229 TSFPYFEFDMKLVSSSSTLVELDNLWN------ITLHEPEHATRPTGAAKRWRGAWQPGPLD----S-GYERSGYHGELH 297 (359)
T ss_dssp SCSSSCEEEEEEEETTSCEEEEETTTE------EEEECTTCCBTTTBSCTTCCEEECCCTTC----C-BSTTTSHHHHHH
T ss_pred cccCCCceeEEEEeCCceEEEecCceE------EEecCCCcceeeccCCCccccccCCCccc----c-CcCchhHHHHHH
Confidence 98775 56799999999754 332210 00110000 0000000011111000 0 012346889999
Q ss_pred HHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCccee
Q 018020 318 RLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIE 359 (362)
Q Consensus 318 ~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~ 359 (362)
+|+++|++|+++..+ .++++.++++++|+++|+++| ++|.
T Consensus 298 ~F~~ai~~g~~~~~~-~~d~l~~~~l~eai~~Sa~~~-~~~~ 337 (359)
T 3m2t_A 298 QFFQAIREHRRFEAD-FASLLPTYRVIEEICSADAVA-QGLQ 337 (359)
T ss_dssp HHHHHHHTTCCCTTS-TGGGHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHhcCCCCCCC-HHHHHHHHHHHHHHHHhhhcC-CCCC
Confidence 999999988776555 777999999999999999998 8775
No 32
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=100.00 E-value=1.3e-52 Score=406.91 Aligned_cols=352 Identities=14% Similarity=0.096 Sum_probs=271.9
Q ss_pred CCceeEEEEEec----cHHHHHHHHHHhcC-CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEE
Q 018020 5 SQAAIRFGIIGA----ADIARKLSRAITLA-PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 5 ~~~~~~v~iiG~----G~~g~~~~~~~~~~-~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i 79 (362)
+|+++||||||+ |.+|..|++.+.+. ++++|++|||+++++++++++++|++ .+.+|+|++++|+++++|+|+|
T Consensus 36 ~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~-~~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 36 SSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLK-HATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp GGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCT-TCEEESCHHHHHHCTTCSEEEE
T ss_pred CCCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC-cceeeCCHHHHhcCCCCCEEEE
Confidence 467899999999 89999999999998 89999999999999999999999974 3468999999999889999999
Q ss_pred cCCCcccHHHHHHHHHcC------CeEEEeCCCCCCHHHHHHHHHHHHHcC-CEEEEeeecccChhHHHHHHhhcCCCCc
Q 018020 80 PLPTSMHVKWAISVAQKK------KHLLMEKPMALNVAEFDVILNACEENG-VQLMDGTMWVHNPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~g------k~V~~EKP~~~~~~~~~~l~~~a~~~~-~~~~v~~~~r~~p~~~~~k~~i~~~g~i 152 (362)
+||+..|++++++||++| |||+||||++.+++++++|.++|+++| +.+++++++||+|.++++|++| ++|.|
T Consensus 115 ~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i-~~G~i 193 (479)
T 2nvw_A 115 SVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRAKELI-SEGCI 193 (479)
T ss_dssp CSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCHHHHHHHHHH-HTTTT
T ss_pred cCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCHHHHHHHHHH-HcCCC
Confidence 999999999999999999 999999999999999999999999999 9999999999999999999999 89999
Q ss_pred cceEEEEEEeeecC--Ccc-cccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC----------
Q 018020 153 GQLRTMHSCFSFAG--DAE-FLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN---------- 219 (362)
Q Consensus 153 G~i~~i~~~~~~~~--~~~-~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~---------- 219 (362)
|+|..+++.+..+. +.. +...+|+.++.. |||.|.|+|+|.+|+++|++|. +|++|++.......
T Consensus 194 G~i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~-gGG~l~d~g~H~lDl~~~l~G~-~p~~V~a~~~~~~~~~~~~~~~g~ 271 (479)
T 2nvw_A 194 GDINSIEISGNGGWYGYERPMRSPEYLYDIES-GVNLISNSFGHTIDVLQYITGS-YFQKINAMISNNIPTQFLLDENGK 271 (479)
T ss_dssp CSEEEEEEEEECSBSSSEEETTCCGGGGCGGG-SCSTTTTHHHHHHHHHHHHHTC-CEEEEEEEEECCCSEEEEEC--CC
T ss_pred CCeEEEEEEecCCccCCcccccccccccCccc-CccHHHHHHHHHHHHHHHHHCC-CCCEEEEEEEeccCcccccccccc
Confidence 99999999875432 111 224568887775 5699999999999999999995 59999998643221
Q ss_pred ------CCCeeEeeEEEEEeCCC-cEEEEEEeeee-----CCceeEEEEeccceEEEcceeccCCCCcceE--Eeccccc
Q 018020 220 ------EAGVILSCGASLHWDDG-RVATFSCSFLA-----NMTMDITATGTNGSLQLHDFIIPFREEEASY--FTNTRCF 285 (362)
Q Consensus 220 ------~~~~~d~~~~~~~~~~G-~~~~~~~~~~~-----~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~--~~~~~~~ 285 (362)
+.+.+|.+.++++|+|| +++++++++.. ....+++|+|++|++.+++...........+ .......
T Consensus 272 ~~g~~~~~~~~D~~~~~l~f~~G~~~~~~~~s~~~~~~~~~~~~~~~I~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (479)
T 2nvw_A 272 RTKETISKTCPDHLLFQGILENGKVPVSCSFKGGTPVKKLTKNLVIDIHGTKGDLKIEGDAGFVEISNLVLYFYGIKNGN 351 (479)
T ss_dssp CCSCEEECCSCCEEEEEEEESGGGCEEEEEEECBSSCCSSSCSEEEEEEESSCEEEEEEC------CCEEEEEEEESCC-
T ss_pred cccccccCCcCeEEEEEEEECCCCEEEEEEEEeccCCCcCCCceEEEEEeCCeEEEEecCCcccccCccEEEEeccCCcc
Confidence 12578999999999999 99999988765 3455899999999999985421011111112 1100000
Q ss_pred ccc------ccccc---ccC-----Cc--ce-------eeecC-C-chhHHHHHHHHHHHHhhhcCC-CC----------
Q 018020 286 FND------LVTGW---VPL-----PS--EH-------VVTTD-I-PQEACMVREFSRLVANIKNGS-KP---------- 329 (362)
Q Consensus 286 ~~~------~~~~~---~~~-----~~--~~-------~~~~~-~-~~~~~~~~~~~~~~~~i~~g~-~~---------- 329 (362)
... ...+| ... +. .. ..... . .....+..++.+|+++|++|. ++
T Consensus 352 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~f~~~i~~g~~~~~~~~~~~~~~ 431 (479)
T 2nvw_A 352 GSSNGTDNNGAAAIKDKEKVTKSPSPSTGTSEEEQTMEVFHLRNYNSVVGNILRIYESIADYHFLGKPESKSSRGPDDLF 431 (479)
T ss_dssp --------------------------------CCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHC---------------
T ss_pred cccccccccccccccccccccccCCCchhhhccccccCCccccccchHHHHHHHHHHHHHHHHhcCCCcccccccccccc
Confidence 000 00011 000 00 00 00000 0 112468899999999999877 51
Q ss_pred -------------CCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 330 -------------EQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 330 -------------~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
...+.+|++++++|++|+++|+++| ++|+|.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~da~~~~~i~~a~~~S~~~g-~~v~v~ 475 (479)
T 2nvw_A 432 ASTKFDKQGFRFEGFPTFKDAIILHRLIDAVFRSDKEE-KTLDVS 475 (479)
T ss_dssp ---CCCCCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHT-BCEECT
T ss_pred cccccccccccccCCCCHHHHHHHHHHHHHHHHHHhcC-Ceeech
Confidence 3345788999999999999999998 999985
No 33
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=100.00 E-value=1.8e-52 Score=402.77 Aligned_cols=349 Identities=14% Similarity=0.083 Sum_probs=271.0
Q ss_pred CceeEEEEEec----cHHHHHHHHHHhcC-CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 6 QAAIRFGIIGA----ADIARKLSRAITLA-PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 6 ~~~~~v~iiG~----G~~g~~~~~~~~~~-~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
|+++||||||+ |.+|..|++.++++ |+++|++|||+++++++++++++|++ .+.+|+|++++|+++++|+|+|+
T Consensus 18 m~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~ll~~~~vD~V~i~ 96 (438)
T 3btv_A 18 AAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLS-NATAFPTLESFASSSTIDMIVIA 96 (438)
T ss_dssp -CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCT-TCEEESSHHHHHHCSSCSEEEEC
T ss_pred cCCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC-cceeeCCHHHHhcCCCCCEEEEe
Confidence 36799999999 89999999999999 89999999999999999999999974 34689999999998899999999
Q ss_pred CCCcccHHHHHHHHHcC------CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 81 LPTSMHVKWAISVAQKK------KHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~g------k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
||+..|.+++++||++| |||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+
T Consensus 97 tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~G~iG~ 175 (438)
T 3btv_A 97 IQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELI-SQGYIGD 175 (438)
T ss_dssp SCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHHHHHH-HTTTTCS
T ss_pred CCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHHHHHH-HcCCCCC
Confidence 99999999999999999 9999999999999999999999999999999999999999999999999 8999999
Q ss_pred eEEEEEEeeecC--Ccc-cccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC------------
Q 018020 155 LRTMHSCFSFAG--DAE-FLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN------------ 219 (362)
Q Consensus 155 i~~i~~~~~~~~--~~~-~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~------------ 219 (362)
|..+++.+..+. +.. +...+|+.++.. |||.|.|+|+|.+|+++|++|. +|++|++.......
T Consensus 176 i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~-gGG~l~d~g~H~lDl~~~l~G~-~~~~V~a~~~~~~~~~~~~d~~~~~~ 253 (438)
T 3btv_A 176 INSIEIAGNGGWYGYERPVKSPKYIYEIGN-GVDLVTTTFGHTIDILQYMTSS-YFSRINAMVFNNIPEQELIDERGNRL 253 (438)
T ss_dssp EEEEEEEEECSSSSSEEETTSCGGGGSTTS-SCSTTTTHHHHHHHHHHHHHTC-CEEEEEEEEECCCSEEEEECTTSCEE
T ss_pred cEEEEEEEccCcccccccCCcccccccccc-CCCeeeeeeeeHHHHHHHHhCC-CceEEEEEeeccCCcccccccccccc
Confidence 999999875432 111 223568887775 5699999999999999999995 58999998643221
Q ss_pred ----CCCeeEeeEEEEEeCCC-cEEEEEEeeee-----CCceeEEEEeccceEEEcceeccCCCCcceEEeccccc----
Q 018020 220 ----EAGVILSCGASLHWDDG-RVATFSCSFLA-----NMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCF---- 285 (362)
Q Consensus 220 ----~~~~~d~~~~~~~~~~G-~~~~~~~~~~~-----~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~---- 285 (362)
..+.+|.+.++++|+|| +++++++++.. ....+++|+|++|++.+++...........+.......
T Consensus 254 g~~~~~~~~D~~~~~l~~~~G~~~~~~~~s~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~l~~~~~~~~~~~~~ 333 (438)
T 3btv_A 254 GQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTKRDLKLEGDAGFAEISNLVLYYSGTRANDFP 333 (438)
T ss_dssp EEEEECCSCSEEEEEEEETTTTEEEEEEEESSCCC---CCSEEEEEEESSCEEEEECC-----CCEEEEEEEC-------
T ss_pred ccccCCCCCceEEEEEEECCCcEEEEEEEEccCCCCCCCCCeEEEEEecCcEEEEecCccccccCceEEEeccCcccccc
Confidence 12467899999999999 99999988765 34558999999999999754100011111111010000
Q ss_pred c---cccc--cccccCCcc-eeee--cCCchhHHHHHHHHHHHHhhhcCCC-----------------CCCCchHhHHHH
Q 018020 286 F---NDLV--TGWVPLPSE-HVVT--TDIPQEACMVREFSRLVANIKNGSK-----------------PEQKWPIISRKT 340 (362)
Q Consensus 286 ~---~~~~--~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~i~~g~~-----------------~~~~~~e~~l~~ 340 (362)
+ .... ..|...... .... ........+..++.+|++ |++|.+ +.+ +.++++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-i~~g~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~ 411 (438)
T 3btv_A 334 LANGQQAPLDPGYDAGKEIMEVYHLRNYNAIVGNIHRLYQSISD-FHFNTKKIPELPSQFVMQGFDFEGFP-TLMDALIL 411 (438)
T ss_dssp ---------------CCEEEEEECCSSCCHHHHHHHHHHHHHHH-HHTTTTCCTTCCSCCSCCTTCSSSCC-CHHHHHHH
T ss_pred ccccceeecCcccccccccCCCcccccCChHHHHHHHHHHHHHH-HhCCCCccccccccccccccccCCCC-CHHHHHHH
Confidence 0 0000 001000000 0000 001123467889999999 998776 444 57889999
Q ss_pred HHHHHHHHHHHhhCCcceeec
Q 018020 341 QLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 341 ~~i~~a~~~S~~~g~~~V~l~ 361 (362)
++|++|+++|+++| ++|+|.
T Consensus 412 ~~i~~a~~~Sa~~g-~~V~~~ 431 (438)
T 3btv_A 412 HRLIESVYKSNMMG-STLNVS 431 (438)
T ss_dssp HHHHHHHHHHHHHT-BCEECT
T ss_pred HHHHHHHHHHHhcC-CeEEec
Confidence 99999999999998 999874
No 34
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=100.00 E-value=1.3e-52 Score=391.16 Aligned_cols=324 Identities=15% Similarity=0.134 Sum_probs=255.9
Q ss_pred CceeEEEEEeccHHHH-HHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIAR-KLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|+++||||||+|+++. .+++.++ .++++|++|||++++++++++++++.. ..|+|++++|+++++|+|+|+||+.
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~~~~~~~~a~~~~~~---~~~~~~~~ll~~~~~D~V~i~tp~~ 77 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESDSDNRAKFTSLFPSV---PFAASAEQLITDASIDLIACAVIPC 77 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSCTTSCHHHHHHSTTC---CBCSCHHHHHTCTTCCEEEECSCGG
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCCHHHHHHHHHhcCCC---cccCCHHHHhhCCCCCEEEEeCChh
Confidence 3589999999999986 5788876 468999999999999999999999543 6899999999999999999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChh-HHHHHHhhcCCCCccceEEEEEEee
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPR-TAQMKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~-~~~~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
.|.+++++||++||||+||||++.+++++++|.++++++|+.+++++++||+|. ++++|++| ++|.||+|..+++.+.
T Consensus 78 ~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i-~~g~iG~i~~v~~~~~ 156 (336)
T 2p2s_A 78 DRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELV-QRGEIGRVIQTMGVGP 156 (336)
T ss_dssp GHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHH-HTTTTSSEEEEEEEEE
T ss_pred hHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHH-hCCCCCceEEEEEEcc
Confidence 999999999999999999999999999999999999999999999999999998 99999999 8999999999998765
Q ss_pred ecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeecccc--CCCCeeEeeEEEEEeCCCcEEEE
Q 018020 164 FAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVL--NEAGVILSCGASLHWDDGRVATF 241 (362)
Q Consensus 164 ~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~--~~~~~~d~~~~~~~~~~G~~~~~ 241 (362)
+...+ ...+|+.++..+ ||.|.|+|+|.+|+++|++|..+|++|++...... ...+.+|.+.++++|+||+++++
T Consensus 157 ~~~~~--~~~~w~~~~~~~-gG~l~d~g~H~id~~~~l~G~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~~ 233 (336)
T 2p2s_A 157 HRERG--ARPDWFYQKRQY-GGILCDIGIHQIEQFLYFTGNTNARVVTSQTANYHHPHHPEFEDFGDAMLLGDNGATGYF 233 (336)
T ss_dssp CBCCS--CCCGGGGCHHHH-CCHHHHTHHHHHHHHHHHHTCSCEEEEEEEEECSSCTTSTTCCSEEEEEEEETTSCEEEE
T ss_pred ccCCC--CCCCceeccccc-CCeeehhhhhHHHHHHHHhCCCCceEEEEeEEeecCCCCCCccchheEEEEECCCcEEEE
Confidence 43322 234688777764 59999999999999999999433688888754322 22467899999999999999999
Q ss_pred EEeeeeCC------ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHH
Q 018020 242 SCSFLANM------TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVRE 315 (362)
Q Consensus 242 ~~~~~~~~------~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (362)
+++|..+. ..+++|+|++|++.+++.................. .... ...+.... ...
T Consensus 234 ~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~-------------~~~~--~~~~~~~~-~~~ 297 (336)
T 2p2s_A 234 RCDWFTPDGLSVWGDGRLTILGTEGYIEIRKYVDLTRGESNVVYLVNGK-------------GEQR--FTPAGSVE-RAF 297 (336)
T ss_dssp EEESBCCTTSSSSCCCEEEEEESSCEEEEECSCBTTTTBCSEEEEESSS-------------CEEE--ECCTTSSC-CCH
T ss_pred EEEecCCCCccccCCceEEEEecceEEEEecccccccCCCceEEeecCC-------------Ccce--eccCCCcc-HHH
Confidence 99987764 34799999999999974321100000111110000 0000 00110000 123
Q ss_pred HHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhC
Q 018020 316 FSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 316 ~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g 354 (362)
+.+|+++++++.++.. +.+++++++++++|+++|++++
T Consensus 298 ~~~f~~~i~~~~~~~~-~~~d~l~~~~i~~a~~~Sa~~~ 335 (336)
T 2p2s_A 298 FPDFLRDCRERTENAM-SQSHIFKATELSILAQQAANKI 335 (336)
T ss_dssp HHHHHHHHHHCCCCSS-CHHHHHHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHHHHhhhhc
Confidence 5689999997776654 4788999999999999999875
No 35
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=100.00 E-value=2.4e-53 Score=397.43 Aligned_cols=325 Identities=15% Similarity=0.122 Sum_probs=255.3
Q ss_pred eeEEEEEeccHHHHH-HHH-HHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARK-LSR-AITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~-~~~-~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
++||||||+|.||.. |++ .+...++++|++|||+++++++.. +++. ++.+|+|++++|+++++|+|+|+||+..
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~-~~~~---~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA-PIYS---HIHFTSDLDEVLNDPDVKLVVVCTHADS 77 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS-GGGT---TCEEESCTHHHHTCTTEEEEEECSCGGG
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH-HhcC---CCceECCHHHHhcCCCCCEEEEcCChHH
Confidence 699999999999985 898 668889999999999998877443 3442 2368999999999999999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeec
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFA 165 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~ 165 (362)
|.+++++|+++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++++.+.
T Consensus 78 h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i-~~g~iG~i~~~~~~~~~~ 156 (345)
T 3f4l_A 78 HFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAI-ESGKLGEIVEVESHFDYY 156 (345)
T ss_dssp HHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH-HHSTTCSEEEEEEECCCB
T ss_pred HHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHH-hcCCCCCeEEEEEEeecc
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999987654
Q ss_pred CCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEee
Q 018020 166 GDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSF 245 (362)
Q Consensus 166 ~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~ 245 (362)
.+ .|+..+...+||.|+|+|+|.+|+++|++| +|++|++.......+.+.+|++.++++|+||. +.+..++
T Consensus 157 ~~------~~~~~~~~~~gG~l~d~g~H~id~~~~l~G--~~~~v~a~~~~~~~~~~~~d~~~~~l~~~~~~-~~~~~s~ 227 (345)
T 3f4l_A 157 RP------VAETKPGLPQDGAFYGLGVHTMDQIISLFG--RPDHVAYDIRSLRNKANPDDTFEAQLFYGDLK-AIVKTSH 227 (345)
T ss_dssp CC------CCCCCCCCGGGSHHHHTHHHHHHHHHHHHC--SCSEEEEEEECCSCTTSSCCEEEEEEEETTEE-EEEEECS
T ss_pred CC------ccccCCCCCCCchhheehHHHHHHHHHHhC--CCeEEEEEEEEecCCCCcceEEEEEEEECCEE-EEEEEEe
Confidence 33 222333444679999999999999999999 69999998765555667899999999999875 5677666
Q ss_pred eeC-CceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccC------------CcceeeecCCchhHHH
Q 018020 246 LAN-MTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPL------------PSEHVVTTDIPQEACM 312 (362)
Q Consensus 246 ~~~-~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 312 (362)
..+ ...+++|+|++|++.+.+...... .... .......+|... ...... ......+.|
T Consensus 228 ~~~~~~~~~~i~G~~G~~~~~~~d~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 298 (345)
T 3f4l_A 228 LVKIDYPKFIVHGKKGSFIKYGIDQQET----SLKA----NIMPGEPGFAADDSVGVLEYVNDEGVTVRE-EMKPEMGDY 298 (345)
T ss_dssp BCSSCCCSEEEEESSEEEEECSCCSHHH----HHHT----TCCTTSTTTTCCCCCEEEEEECTTSCEEEE-EECCCCCCT
T ss_pred cccCCCCEEEEEecceEEEEeCCChhHH----HHhc----CCCCCCCCCCcCCCcceEEEecCCCcccce-ecCCCCCCH
Confidence 554 355899999999999865321000 0000 000000011110 000000 011113357
Q ss_pred HHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcc
Q 018020 313 VREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEP 357 (362)
Q Consensus 313 ~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~ 357 (362)
..++++|+++|++|.++.. +.+|++++++|++|+++|+++| ++
T Consensus 299 ~~~~~~f~~ai~~g~~~~~-~~~da~~~~~iiea~~~Sa~~g-~~ 341 (345)
T 3f4l_A 299 GRVYDALYQTITHGAPNYV-KESEVLTNLEILERGFEQASPS-TV 341 (345)
T ss_dssp THHHHHHHHHHHHCCCCSS-CHHHHHHHHHHHHHTTSSSSSE-EE
T ss_pred HHHHHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHHHHhhhcC-cc
Confidence 8899999999998887765 4788999999999999999999 44
No 36
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=100.00 E-value=5.6e-52 Score=388.58 Aligned_cols=334 Identities=19% Similarity=0.251 Sum_probs=267.7
Q ss_pred CCccCCceeEEEEEeccHHHHHHHHHHh-cCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEE
Q 018020 1 MATESQAAIRFGIIGAADIARKLSRAIT-LAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~G~~g~~~~~~~~-~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i 79 (362)
|++ +++++||||||+|.||..|++.+. +.++++++++||+++++++.+++++|++ .+|+|++++++++++|+|+|
T Consensus 2 m~~-~~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~---~~~~~~~~~l~~~~~D~V~i 77 (346)
T 3cea_A 2 MVT-TRKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVE---TTYTNYKDMIDTENIDAIFI 77 (346)
T ss_dssp ----CCCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCS---EEESCHHHHHTTSCCSEEEE
T ss_pred CCC-CCCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCC---cccCCHHHHhcCCCCCEEEE
Confidence 543 456899999999999999999998 7889999999999999999999999874 67999999999888999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCEEEEeeecccChhHHHHHHhhcCCCCccceEEE
Q 018020 80 PLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEEN-GVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTM 158 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~-~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i 158 (362)
+||+..|.+++..|+++||||+||||++.+.+++++|.++++++ |+.+++++++||+|.++++|++| ++|.||+|..+
T Consensus 78 ~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i-~~g~iG~i~~v 156 (346)
T 3cea_A 78 VAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIV-DNGDIGKIIYM 156 (346)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHH-HTTTTCSEEEE
T ss_pred eCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHH-HcCCCCCeEEE
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999 89999999999
Q ss_pred EEEeeecCCcccccCccCcCCCC--CCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC----CCCeeEeeEEEEE
Q 018020 159 HSCFSFAGDAEFLKNDIRVKPDL--DGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN----EAGVILSCGASLH 232 (362)
Q Consensus 159 ~~~~~~~~~~~~~~~~w~~~~~~--~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~----~~~~~d~~~~~~~ 232 (362)
++.+..+.++ ..|+.+... .+||.|.|+|+|.+|+++|++|. +|++|++....... +.+..|++.++++
T Consensus 157 ~~~~~~~~~~----~~~~~~~~~~~~~gG~l~d~g~H~lD~~~~l~G~-~~~~V~a~~~~~~~~~~~~~~~~D~~~~~l~ 231 (346)
T 3cea_A 157 RGYGIDPISG----MESFTKFATEADSGGIFVDMNIHDIDLIRWFTGQ-DPVQAYGLTSNIAAPQLADIGEFETGVAQLK 231 (346)
T ss_dssp EEEEEEEGGG----HHHHHHHHHHSCCCCHHHHTTHHHHHHHHHHHSC-CEEEEEEEEECSSCGGGGGGTCCSEEEEEEE
T ss_pred EEEecCCCCC----ChhHhhhcccCCCCchHHHhhccHHHHHHHHcCC-CCeEEEEEEeeccCccccccCCceeEEEEEE
Confidence 9876543221 123322211 15699999999999999999994 48999998643211 1233578899999
Q ss_pred eCCCcEEEEEEeeeeCC--ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhH
Q 018020 233 WDDGRVATFSCSFLANM--TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEA 310 (362)
Q Consensus 233 ~~~G~~~~~~~~~~~~~--~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (362)
|+||.++++++++..+. ..+++|+|++|++.+++... .....+....+ ... ..+. . ......+
T Consensus 232 ~~~G~~~~~~~s~~~~~~~~~~~~i~G~~G~i~~~~~~~---~~~~~~~~~~~-~~~-------~~~~-~---~~~~~~~ 296 (346)
T 3cea_A 232 MSDGVIATLIGGRHAAHGNQVELEVMGSNGWVRIGEHPD---LNRVTVFNDQG-VVR-------PSLQ-S---FGERFDT 296 (346)
T ss_dssp ETTSCEEEEEEEEEESSSCEEEEEEEESSCEEEECSSCB---CSSEEEEETTE-EEE-------CBCC-C---HHHHSHH
T ss_pred ECCCcEEEEEEEEecCCCCceEEEEEECCCEEEEcCCCC---CccEEEEeCCC-ccc-------CCCc-c---hhhHhhH
Confidence 99999999999998764 45799999999999975320 11111111100 000 0000 0 0011245
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcceeec
Q 018020 311 CMVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIEIK 361 (362)
Q Consensus 311 ~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~l~ 361 (362)
.|..++.+|+++|++|.++.. +.+++++++++++|+++|+++| ++|+|+
T Consensus 297 ~~~~~~~~f~~~i~~~~~~~~-~~~~~~~~~~i~~a~~~S~~~g-~~v~~~ 345 (346)
T 3cea_A 297 AFTDEVQDFVNNVIVGKQPEV-TVDDGIKALKIAKACQQSANIG-KLVDIQ 345 (346)
T ss_dssp HHHHHHHHHHHHHHHTCCCSS-CHHHHHHHHHHHHHHHHHHHHT-SCEECC
T ss_pred HHHHHHHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHHHHHHHcC-CeEecC
Confidence 788999999999998877655 5788999999999999999999 999875
No 37
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=100.00 E-value=1.2e-52 Score=398.52 Aligned_cols=342 Identities=19% Similarity=0.201 Sum_probs=261.4
Q ss_pred eeEEEEEecc-HHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAA-DIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G-~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
++||||||+| .+|..|++.+.+.+++++++|||+++++++++++++|++ .|+|++++|+++++|+|+|+||+..|
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~----~~~~~~ell~~~~vD~V~i~tp~~~H 77 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIP----VFATLAEMMQHVQMDAVYIASPHQFH 77 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCC----EESSHHHHHHHSCCSEEEECSCGGGH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCC----eECCHHHHHcCCCCCEEEEcCCcHHH
Confidence 6999999999 889999999999999999999999999999999999874 79999999999899999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG 166 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~ 166 (362)
++++++||++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+....
T Consensus 78 ~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~i~~~~~~~~~~~ 156 (387)
T 3moi_A 78 CEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIV-QEGSVGRVSMLNCFNYTDF 156 (387)
T ss_dssp HHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHH-HHCTTCCEEEEEEEEECCG
T ss_pred HHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHH-hcCCCCCeEEEEEEecccc
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999999998653211
Q ss_pred CcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEeee
Q 018020 167 DAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSFL 246 (362)
Q Consensus 167 ~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~~~ 246 (362)
... ....|..+.. .|||+|+|+|+|.+|+++||+|. +|++|++...........+|.+.++++|+||++++++++|.
T Consensus 157 ~~~-~~~~~~~~~~-~ggG~l~d~g~H~id~~~~l~g~-~~~~V~a~~~~~~~~~~~~d~~~~~l~f~~G~~~~~~~s~~ 233 (387)
T 3moi_A 157 LYR-PRRPEELDTS-KGGGIIYNQLPHQIDSIKTITGQ-RITAVRAMTGRLDPKRPTEGNCAAMLTLEDGACAVMVYSGY 233 (387)
T ss_dssp GGS-CCCGGGGCGG-GTCSHHHHTHHHHHHHHHHHHCC-CEEEEEEEEECCCTTSCSCCEEEEEEEETTSCEEEEEEECS
T ss_pred ccC-CCChhhcccc-cCCcchhhhHHHHHHHHHHHhCC-CceEEEEEEeecCCCCCcceEEEEEEEECCCCEEEEEEecc
Confidence 100 0011222233 35699999999999999999984 59999999755555567889999999999999999999987
Q ss_pred eCCce--eEEEEeccceEEEcceecc------C--------------CC-------------CcceEEecc----ccccc
Q 018020 247 ANMTM--DITATGTNGSLQLHDFIIP------F--------------RE-------------EEASYFTNT----RCFFN 287 (362)
Q Consensus 247 ~~~~~--~~~v~G~~G~i~~~~~~~~------~--------------~~-------------~~~~~~~~~----~~~~~ 287 (362)
.+... ...+.|++|.+........ . .. ....|.... .....
T Consensus 234 ~~~~~~~~~~~~g~~g~~~~p~~g~~~~~~~~~g~d~qe~~l~~~~~~g~~~~~d~~~~~~~~~~~fG~~~~~~~~~~~~ 313 (387)
T 3moi_A 234 DHFDSDEMHFWLAEGGRAKQPNHGGARKVLRQLEGDEAELRRSRYGFGGPISKSMESGNTDRKQPHFGVMLVTCEHADLR 313 (387)
T ss_dssp SSSCGGGGTTTBCTTSSBCCCCSSHHHHHHHHCCSCHHHHHHHHHSTTSTTCCC------CCCCCCCSEEEEEESSEEEE
T ss_pred cCCCCCeEEEEEEcCCeecCccccccccceeccCCcchhhhccccccCCccccccccccccccccccCccccchhccCCC
Confidence 76543 4566777777665320000 0 00 000000000 00000
Q ss_pred cccccc--ccCCcceeeecC-CchhHHHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhCCccee
Q 018020 288 DLVTGW--VPLPSEHVVTTD-IPQEACMVREFSRLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERGFEPIE 359 (362)
Q Consensus 288 ~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~V~ 359 (362)
....+. ............ ......|..++.+|+++|++|.++.. +.++++++++|++|+++|+++| ++|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~g~~~~~-~~e~a~~~l~v~eA~~~Sa~~g-~~V~ 386 (387)
T 3moi_A 314 ASPEGVLVYGDEGVREVPAITGRGPFSQGDTIDELRDAIAGVAPALR-DARWGKDTLEVCLAVLESSATG-RQVE 386 (387)
T ss_dssp ECSSEEEEEETTEEEEEECCCCSSSTHHHHHHHHHHHHHTTSSCCSS-CHHHHHHHHHHHHHHHHHHHHS-SCEE
T ss_pred CCCCceEEecCCCceeeccCCCCCCcchHHHHHHHHHHHhCCCCCCC-CHHHHHHHHHHHHHHHHhhhcC-CcCc
Confidence 000000 000001111011 11222378999999999997776555 5888999999999999999999 9885
No 38
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=100.00 E-value=2.4e-49 Score=364.80 Aligned_cols=304 Identities=15% Similarity=0.165 Sum_probs=243.9
Q ss_pred CCceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 5 SQAAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+|+++||||||+|.||.. |++.+.+++++++++|||+++++++++++++|++ .|+|++++++ ++|+|+|+||+
T Consensus 3 ~M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~----~~~~~~~ll~--~~D~V~i~tp~ 76 (308)
T 3uuw_A 3 AMKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIM----PFDSIESLAK--KCDCIFLHSST 76 (308)
T ss_dssp --CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCC----BCSCHHHHHT--TCSEEEECCCG
T ss_pred ccccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCC----CcCCHHHHHh--cCCEEEEeCCc
Confidence 356899999999999996 8999999999999999999999999999999975 4999999999 69999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEee
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
..|.+++..|+++||||+||||++.+++++++|.++++++|+.+++++++||+|.++++|++| |++..+++.+.
T Consensus 77 ~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i------g~~~~~~~~~~ 150 (308)
T 3uuw_A 77 ETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPMYKEIKNNA------TEIVSINICKH 150 (308)
T ss_dssp GGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHC------CSEEEEEEEEE
T ss_pred HhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCHHHHHHHHHc------CCCcEEEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999987 44555555443
Q ss_pred ecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 164 FAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 164 ~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
... .+..|+ ++|.|.|+|+|.+|+++|++| .|.+|.+.... ....+.+|++.++++|+|| ++++..
T Consensus 151 r~~----~~~~~~------~~g~l~d~g~H~id~~~~l~G--~~~~v~~~~~~-~~~~~~~d~~~~~l~~~~g-~~~~~~ 216 (308)
T 3uuw_A 151 GLN----SLRNVR------FDSTLIDDYIHVIDTALWLAN--EDVEISGEDLF-LTDNKNLIFVSHKLKGKNF-SINTSM 216 (308)
T ss_dssp CSS----CCCSSC------HHHHHHHTHHHHHHHHHHHHC--SCCEEEEEEEE-ECTTSCEEEEEEEEECSSC-EEEEEE
T ss_pred cCC----CCCccc------cCceeeecchHHHHHHHHHcC--CCceEEEeeee-ecCCCceeEEEEEEEeCCE-EEEEEE
Confidence 221 122343 347999999999999999999 58888877432 2455688999999999987 588888
Q ss_pred eeeeCCc-eeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHh
Q 018020 244 SFLANMT-MDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVAN 322 (362)
Q Consensus 244 ~~~~~~~-~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (362)
++..+.. .+++|+|++|++.+++... ..+...... .......|. .......|..++++|+++
T Consensus 217 s~~~~~~~~~~~i~G~~G~i~~~~~~~------~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~e~~~F~~~ 279 (308)
T 3uuw_A 217 HRDSGTKLEQVEILSKGKIQRVKNLNV------LEIEEGGNL-TLKQSGAWV----------NILKQKGFEDISNHFIDC 279 (308)
T ss_dssp ETTCSSCEEEEEEEETTEEEEEETTTE------EEEEETTEE-EEEECCTTC----------CHHHHHTHHHHHHHHHHH
T ss_pred EcCCCCCeEEEEEEECCcEEEEecCce------EEEEcCCcc-eecccCCcc----------chhhccchHHHHHHHHHH
Confidence 8877653 4899999999999985321 111111100 000000010 012345689999999999
Q ss_pred hhcCCCCCCCchHhHHHHHHHHHHHHHHHh
Q 018020 323 IKNGSKPEQKWPIISRKTQLIIDAVKTSIE 352 (362)
Q Consensus 323 i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~ 352 (362)
|++|.+|..+ .++++++++|++++++|++
T Consensus 280 i~~g~~~~~~-~~d~~~~~~i~~ai~~S~k 308 (308)
T 3uuw_A 280 IENNIKPAIN-GEECIKAQRLLEKIINSVK 308 (308)
T ss_dssp HHTTCCCSSC-GGGGTHHHHHHHHHHHTCC
T ss_pred HhCCCCCCcC-HHHHHHHHHHHHHHHHhcC
Confidence 9988766554 7779999999999999974
No 39
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=100.00 E-value=6.8e-49 Score=364.46 Aligned_cols=315 Identities=17% Similarity=0.227 Sum_probs=246.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
++||||||+|.||..|++.+.+.++++++++||+++++++++++++|++ ..|+|+++++ ++++|+|+|+||+..|.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~l-~~~~D~V~i~tp~~~h~ 76 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNI---QLFDQLEVFF-KSSFDLVYIASPNSLHF 76 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSC---EEESCHHHHH-TSSCSEEEECSCGGGHH
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCC---eEeCCHHHHh-CCCCCEEEEeCChHHHH
Confidence 4899999999999999999999999999999999999999999999864 6899999999 77899999999999999
Q ss_pred HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecCC
Q 018020 88 KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAGD 167 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~~ 167 (362)
+++.+|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| ++ |+|..+++.+..+.+
T Consensus 77 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i-~~---G~i~~v~~~~~~~~~ 152 (325)
T 2ho3_A 77 AQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFL-AD---XQVLGADFNYAKYSS 152 (325)
T ss_dssp HHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHH-TT---SCEEEEEEEEECCCC
T ss_pred HHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHh-hh---cCccEEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999 54 888888877764321
Q ss_pred --ccccc--CccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEE
Q 018020 168 --AEFLK--NDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSC 243 (362)
Q Consensus 168 --~~~~~--~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~ 243 (362)
..+.. ..|++++.. +||.|.|+|+|.+|+++|++| .|++|++..... ..+.+|.+.++++|+||. +++..
T Consensus 153 ~~~~~~~~~~~~~~~~~~-~gG~l~d~g~H~ld~~~~l~G--~~~~v~a~~~~~--~~~~~d~~~~~l~~~~g~-~~~~~ 226 (325)
T 2ho3_A 153 KMPDLLAGQTPNVFSDRF-AGGALMDLGIYPLYAAVRLFG--KANDATYHAQQL--DNSIDLNGDGILFYPDYQ-VHIKA 226 (325)
T ss_dssp C-------------------CCHHHHTTHHHHHHHHHHHC--SCSEEEEEEEEC--TTSCEEEEEEEEECSSCE-EEEEE
T ss_pred cccccccCcccccCCcCC-CCcchhhhHHHHHHHHHHHcC--CCcEEEEEEeec--CCCccceEEEEEEeCCcE-EEEEE
Confidence 11111 235555555 559999999999999999999 689999985432 245789999999999874 67888
Q ss_pred eeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhh
Q 018020 244 SFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANI 323 (362)
Q Consensus 244 ~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 323 (362)
++..+...+++|+|++|++.+++.... ....+....+ .. ... ......+.|..++.+|+++|
T Consensus 227 ~~~~~~~~~~~i~G~~G~i~~~~~~~~---~~~~~~~~~g-~~-------------~~~-~~~~~~~~~~~e~~~f~~~i 288 (325)
T 2ho3_A 227 GKNITSNLPCEIYTTDGTLTLNTIEHI---RSAIFTDHQG-NQ-------------VQL-PIQQAPHTMTEEVAAFAHMI 288 (325)
T ss_dssp ESSSCCCCCEEEEETTEEEEESCSSSC---CCEEEEETTS-CE-------------EEC-CCCCCSSTTHHHHHHHHHHH
T ss_pred EEecCCCCeEEEEeCCeEEEECCcCCC---ceEEEEeCCC-CE-------------EEE-ecCCcCcchHHHHHHHHHHH
Confidence 876655567999999999999753211 1111111100 00 000 00112345788999999999
Q ss_pred hcCCCC-CCCchHhHHHHHHHHHHHHHHHhhC
Q 018020 324 KNGSKP-EQKWPIISRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 324 ~~g~~~-~~~~~e~~l~~~~i~~a~~~S~~~g 354 (362)
++|.++ ...+.++++++++|++++++|+...
T Consensus 289 ~~g~~~~~~~~~~~~~~~~~i~~a~~~s~~~~ 320 (325)
T 2ho3_A 289 QQPDLNLYQTWLYDAGSVHELLYTMRQTAGIR 320 (325)
T ss_dssp HSCCHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HcCCccCCCccHHHHHHHHHHHHHHHHHCCCC
Confidence 977753 2345788999999999999998643
No 40
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=100.00 E-value=1e-50 Score=391.57 Aligned_cols=348 Identities=15% Similarity=0.096 Sum_probs=260.8
Q ss_pred CCceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH---HcCCCCCCcccC----CHHHHhcCCCCcEE
Q 018020 5 SQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK---ANNFPPDAKVYG----SYEALLDDKDIDAV 77 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~---~~~~~~~~~~~~----~~~e~l~~~~~D~V 77 (362)
+|+++||||||+|.||..|++.+.++|+++|++|||+++++++++++ ++|++ .+.+|+ |++++|+++++|+|
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~-~~~~~~~~~~~~~~ll~~~~vD~V 95 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKK-PAKVFGNGNDDYKNMLKDKNIDAV 95 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCC-CCEEECSSTTTHHHHTTCTTCCEE
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCC-CCceeccCCCCHHHHhcCCCCCEE
Confidence 46789999999999999999999999999999999999999998887 45763 346788 99999999899999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEE
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRT 157 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~ 157 (362)
+|+||+..|.+++++||++||||+||||++.+++++++|.++|+++|+.+++++++||.|.++++|++| ++|.||+|..
T Consensus 96 ~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i-~~G~iG~i~~ 174 (444)
T 2ixa_A 96 FVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMV-RKGMFGELVH 174 (444)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHH-HTTTTCSEEE
T ss_pred EEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHH-HcCCCCCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred EEEEeeecCCc-----c---------------cccCccCcCCCCC---------CCc-ccccccchHHHHHHHHccC-CC
Q 018020 158 MHSCFSFAGDA-----E---------------FLKNDIRVKPDLD---------GLG-ALGDAGWYGIRSILWANDY-EL 206 (362)
Q Consensus 158 i~~~~~~~~~~-----~---------------~~~~~w~~~~~~~---------ggg-~l~~~g~h~id~~~~l~g~-~~ 206 (362)
+++.+.+..+. . |...+|+.++... ++| ++.|+++|.+|+++|++|. ..
T Consensus 175 v~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~g~~~~~~ggG~vl~d~giH~~D~~~~l~g~~~~ 254 (444)
T 2ixa_A 175 GTGGYQHDLRPVLFNSGINGKNGDGVEFGEKAFSEAKWRTNHYKNRNGELYPTHGVGPLHTMMDINRGNRLLRLSSFASK 254 (444)
T ss_dssp EEECCBCCCHHHHCBCSCTTCCSSCCBCSTTSCGGGGTHHHHHHHCCSCCCCHHHHHHHHHHHTBTTTBCEEEEEEEECC
T ss_pred EEEEEeccchhhhcccccccccccccccccccccCCCcccchhhccCCCcccccccCHHHHhhcccccchhheeeccccc
Confidence 99987643211 1 1234677654331 224 5999999999999999983 12
Q ss_pred CcEEEEeeccc----cC----CCCeeEeeEEEEEeCCCcEEEEEEeeeeCC--ceeEEEEeccceEEEcceeccCCCCcc
Q 018020 207 PKTVIAMHGPV----LN----EAGVILSCGASLHWDDGRVATFSCSFLANM--TMDITATGTNGSLQLHDFIIPFREEEA 276 (362)
Q Consensus 207 ~~~V~a~~~~~----~~----~~~~~d~~~~~~~~~~G~~~~~~~~~~~~~--~~~~~v~G~~G~i~~~~~~~~~~~~~~ 276 (362)
+.+|.+..... .. +.+.+|.+.++++|+||++++++.++..+. ..+++|+||+|++.+...... ...
T Consensus 255 ~~~v~a~~~~~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~~s~~~~~~~~~~~~v~Gt~G~i~~~~~~~~---~~~ 331 (444)
T 2ixa_A 255 ARGLHKYIVDKGGESHPNAKVEWKQGDIVTTQIQCHNGETIVLTHDTSLQRPYNLGFKVQGTEGLWEDFGWGEA---AQG 331 (444)
T ss_dssp CCHHHHHHHHHHCTTSGGGGCCCCSCSCEEEEEEETTSCEEEEEEBCSSCCCCCCCCEEEESSCEEEECSSSCT---TSE
T ss_pred ccchhhhHHHhcCCCCcccccccccCceeEEEEEECCCCEEEEEEEeccCCCCCceEEEEEeeeEEEecccccC---CCc
Confidence 34444432111 01 234678999999999999999999998764 357999999999998643100 000
Q ss_pred eEEecccccccccccccccCCcce-eee-----------cCCchhHHHHHHHHHHHHhhhcCCCCCCCchHhHHHHHHHH
Q 018020 277 SYFTNTRCFFNDLVTGWVPLPSEH-VVT-----------TDIPQEACMVREFSRLVANIKNGSKPEQKWPIISRKTQLII 344 (362)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~e~~l~~~~i~ 344 (362)
.+....... ....|...+... .+. ............+.+|+++|++|.++..+ .++++++++|+
T Consensus 332 ~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gh~g~~~~~~~~fi~~i~~g~~~~~~-~~da~~~~~i~ 407 (444)
T 2ixa_A 332 FIYFEKIMN---HSHRWDSSEKWIKEYDHPMWKKHEQKAVGAGHGGMDYFLDNTFVECIKRNEAFPLD-VYDLATWYSIT 407 (444)
T ss_dssp EEECTTTTT---TCCSCEESHHHHHHTCCHHHHHHHHHHSTTSCCTHHHHHHHHHHHHHHHTCCCSSC-HHHHHHHHHHH
T ss_pred eEEecCCCC---CccccccchhhHHhcCChhhhhhhhhcccCCCCCccHHHHHHHHHHHhcCCCCCCC-HHHHHHHHHHH
Confidence 011111100 000110000000 000 00000011122467899999988766655 77799999999
Q ss_pred HHHHHHHhhCCcceeec
Q 018020 345 DAVKTSIERGFEPIEIK 361 (362)
Q Consensus 345 ~a~~~S~~~g~~~V~l~ 361 (362)
+|+++|+++||++|+|+
T Consensus 408 ~aa~~Sa~~gg~~V~ip 424 (444)
T 2ixa_A 408 PLSEKSIAENGAVQEIP 424 (444)
T ss_dssp HHHHHHHHTTTCCEECC
T ss_pred HHHHHHHHcCCceeecc
Confidence 99999999998999983
No 41
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=6.8e-50 Score=369.21 Aligned_cols=289 Identities=14% Similarity=0.110 Sum_probs=241.0
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh---------cCCCCcEE
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALL---------DDKDIDAV 77 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l---------~~~~~D~V 77 (362)
++||||||+ |++|..|++.+++. +++++++||++++++ .+++.++ ++.+|+|+++++ +++++|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~-~~~~~~~---~~~~~~~~~~ll~~~~~l~~~~~~~vD~V 77 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVG-IIDSISP---QSEFFTEFEFFLDHASNLKRDSATALDYV 77 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG-GGGGTCT---TCEEESSHHHHHHHHHHHTTSTTTSCCEE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHH-HHHhhCC---CCcEECCHHHHHHhhhhhhhccCCCCcEE
Confidence 699999999 78999999999987 799999999998763 4555553 347899999999 47899999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEE
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRT 157 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~ 157 (362)
+|+||+..|++++++||++||||+||||++.|++++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..
T Consensus 78 ~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~g~iG~i~~ 156 (318)
T 3oa2_A 78 SICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKV-AREKSPHKYE 156 (318)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHH-HHS-CSSCEE
T ss_pred EECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHHHHHH-hcCCCCceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred EEEEeeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCc
Q 018020 158 MHSCFSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGR 237 (362)
Q Consensus 158 i~~~~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~ 237 (362)
+++.+....+.. ...+|+.++..+| |.+.|+|+|.+|+++|++| .|.+|.+.. ..+|.+.++++|+||.
T Consensus 157 v~~~~~~~~~~~-~~~~w~~~~~~~g-G~l~d~g~H~id~~~~l~G--~~~~v~~~~-------~~~d~~~~~l~~~~g~ 225 (318)
T 3oa2_A 157 VDLTYITSRGNW-YLKSWKGDPRKSF-GVATNIGVHFYDMLHFIFG--KLQRNVVHF-------TSEYKTAGYLEYEQAR 225 (318)
T ss_dssp EEEEEEECCCHH-HHHSGGGCHHHHC-CHHHHHHHHHHHHHHHHHC--SEEEEEEEE-------ECSSEEEEEEEETTEE
T ss_pred EEEEEEecCCCC-CCcccccCCCcCC-CccccCCcHHHHHHHHHhC--CCceEEEEe-------cCCcEEEEEEEeCCCe
Confidence 999988655433 3457888888755 9999999999999999999 688888873 2567889999999998
Q ss_pred EEEEEEeeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHH
Q 018020 238 VATFSCSFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFS 317 (362)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (362)
++.+ +++......+ +|+|++|++...... .+ + ....+.|..++.
T Consensus 226 ~~~~-~s~~~~~~~~-~i~G~~G~~~~~~~d----~q-------------------------e-----~~~~~g~~~~~~ 269 (318)
T 3oa2_A 226 VRWF-LSVDANDLPE-SVKGKKPTYRSITVN----GE-------------------------E-----MEFSEGFTDLHT 269 (318)
T ss_dssp EEEE-EECCGGGSCT-TTTTTCSEEEEEEET----TE-------------------------E-----CCC-----CHHH
T ss_pred EEEE-EEecCCCCCe-EEEecCcEEEEEeEC----cc-------------------------H-----HHHhcCCchhhH
Confidence 7766 4454444445 999999999976321 00 0 111235677889
Q ss_pred HHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHh
Q 018020 318 RLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIE 352 (362)
Q Consensus 318 ~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~ 352 (362)
+|+++|++|+++ .++|++.+++|+++++.+..
T Consensus 270 ~~~~~i~~g~~~---~~~da~~~~~i~~~i~~~~~ 301 (318)
T 3oa2_A 270 TSYEEILAGRGY---GIDDARHCVETVNTIRSAVI 301 (318)
T ss_dssp HHHHHHHTTCCC---CHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCC---CHHHHHHHHHHHHHHhcCCc
Confidence 999999988655 58889999999999998766
No 42
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=100.00 E-value=1.5e-47 Score=353.89 Aligned_cols=311 Identities=16% Similarity=0.209 Sum_probs=245.9
Q ss_pred CCccC-CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEE
Q 018020 1 MATES-QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 1 m~~~~-~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i 79 (362)
|+..+ ++++||||||+|.||..|++.+.+.++++++++||++++++++++++ + ..|+|++++++++++|+|+|
T Consensus 2 m~~p~~~~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~--~----~~~~~~~~~l~~~~~D~V~i 75 (315)
T 3c1a_A 2 MSIPANNSPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG--C----VIESDWRSVVSAPEVEAVII 75 (315)
T ss_dssp -------CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT--C----EEESSTHHHHTCTTCCEEEE
T ss_pred CCCCCCCCcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh--C----cccCCHHHHhhCCCCCEEEE
Confidence 54333 35699999999999999999999999999999999999988766554 2 57999999999888999999
Q ss_pred cCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEE
Q 018020 80 PLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMH 159 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~ 159 (362)
+||+..|.+++.+|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| + .||+|..++
T Consensus 76 ~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i-~--~lG~i~~v~ 152 (315)
T 3c1a_A 76 ATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADL-T--SIGPILAVR 152 (315)
T ss_dssp ESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTH-H--HHCSEEEEE
T ss_pred eCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHH-H--HcCCeEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 5 899999999
Q ss_pred EEeeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccC-CCCeeEeeEEEEEeCCCcE
Q 018020 160 SCFSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLN-EAGVILSCGASLHWDDGRV 238 (362)
Q Consensus 160 ~~~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~-~~~~~d~~~~~~~~~~G~~ 238 (362)
+.+.. ...| ...|||.+.|+|+|.+|+++|++|. +|++|++....... ..+.+|++.++++| ||.+
T Consensus 153 ~~~~~-------~~~~----~~~ggG~l~d~g~H~id~~~~l~G~-~~~~v~a~~~~~~~~~~~~~d~~~~~l~~-~g~~ 219 (315)
T 3c1a_A 153 SEAGN-------HGPY----RPGGVPMLWDWGAHDVSMVLDLMGR-DPDSTSASWAARGEKDGGEAGDVTLTLAF-STVE 219 (315)
T ss_dssp EEEEE-------ECCC----CTTCCCHHHHHHHHHHHHHHHHHSS-CCSEEEEEEEEEEEETTEEEEEEEEEEEE-TTEE
T ss_pred EEEec-------CCCc----cccCCcchhhhhchHHHHHHHHhCC-CCcEEEEEeEeecCCCCCCCceEEEEEEE-CCEE
Confidence 87611 1224 2335699999999999999999994 49999998643332 15688999999999 9999
Q ss_pred EEEEEeeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHH
Q 018020 239 ATFSCSFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSR 318 (362)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
++++++.......+++|+|++|++.+++... ....+.. ... ...|... . .........+.|..++.+
T Consensus 220 ~~~~~s~~~~~~~~~~i~G~~G~i~~~~~~~----~~~~~~~--~~~----~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 286 (315)
T 3c1a_A 220 AHIRLCNTMDKCRRLAVFGEAGTLVMDDRAT----DKLTLHP--PQP----DGNWPVG-Q--GHALTVTDEMPLTRAVRL 286 (315)
T ss_dssp EEEEEESEEEEEEEEEEEESSCEEEEETTSS----SSSEEEC--CCS----SCCCCCS-C--CEECCCCCCCHHHHHHHH
T ss_pred EEEEEecCCCCCceEEEEecccEEEEccCCC----ceEEEEc--CCc----ccccCCC-c--ccccCCCccchHHHHHHH
Confidence 9999982223345799999999999975321 0111111 100 1112110 0 011222334578899999
Q ss_pred HHHhhhcCCCCCCCchHhHHHHHHHHHHH
Q 018020 319 LVANIKNGSKPEQKWPIISRKTQLIIDAV 347 (362)
Q Consensus 319 ~~~~i~~g~~~~~~~~e~~l~~~~i~~a~ 347 (362)
|+++|++|.+|.. +.+++++++++++|+
T Consensus 287 f~~~i~~~~~~~~-~~~~~~~~~~i~~a~ 314 (315)
T 3c1a_A 287 FAGAVRQPEPGPS-PLELGLRVVRVLGAC 314 (315)
T ss_dssp HHHHTTSCCCCSS-BHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCC-CHHHHHHHHHHHHhh
Confidence 9999998877655 478899999999987
No 43
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=3.1e-47 Score=352.98 Aligned_cols=307 Identities=17% Similarity=0.160 Sum_probs=243.2
Q ss_pred eeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
++||||||+|.||.. |++.+.+.++++++ +||+++++++++++++|++ ..+.+..++| ++++|+|+|+||+..|
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~~~~~~~~~a~~~g~~---~~~~~~~~~l-~~~~D~V~i~tp~~~h 76 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTRNPKVLGTLATRYRVS---ATCTDYRDVL-QYGVDAVMIHAATDVH 76 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECSCHHHHHHHHHHTTCC---CCCSSTTGGG-GGCCSEEEECSCGGGH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHHHHcCCC---ccccCHHHHh-hcCCCEEEEECCchhH
Confidence 589999999999984 99999988899999 9999999999999999975 3356666777 5689999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeeecC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG 166 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~~~ 166 (362)
.+++.+|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| ++|.||+|..+++.+....
T Consensus 77 ~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i-~~g~iG~i~~v~~~~~~~~ 155 (323)
T 1xea_A 77 STLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSEL-AQQECGALRSLRWEKHRHA 155 (323)
T ss_dssp HHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHH-HHTSCTTCSEEEEEEECBS
T ss_pred HHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHH-hcCCcCCceEEEEEecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 8899999999988764332
Q ss_pred CcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCc-EEEEEEee
Q 018020 167 DAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGR-VATFSCSF 245 (362)
Q Consensus 167 ~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~-~~~~~~~~ 245 (362)
.+ . .++|.|.|+|+|.+|+++|++|. +|++|++..... .++...++++|++|. .+++..++
T Consensus 156 ~p----~--------~~~g~l~d~g~H~id~~~~l~G~-~~~~V~a~~~~~-----~~d~~~~~~~~~~g~~~~~~~~~~ 217 (323)
T 1xea_A 156 LP----G--------DIRTFVFDDFIHPLDSVNLSRQC-NLDDLHLTYHMS-----EGLLARLDVQWQTGDTLLHASMNR 217 (323)
T ss_dssp CC----B--------CHHHHHHTTTHHHHHHHCTTCCC-SCTTEEEEEEEE-----TTEEEEEEEEEEETTEEEEEEEET
T ss_pred Cc----c--------cchhhhhhcceeHHHHHHHHhCC-CceEEEEEEeec-----CCceEEEEEEEcCCCEEEEEEEEe
Confidence 21 1 12478999999999999999994 378999985322 234566777777674 67777766
Q ss_pred eeCC-ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHHHHHhhh
Q 018020 246 LANM-TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSRLVANIK 324 (362)
Q Consensus 246 ~~~~-~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 324 (362)
..+. ..+++|+|++|++.+++.... ..+........ ....|.. ......|..++.+|+++|+
T Consensus 218 ~~~~~~~~~~i~G~~G~i~~~~~~~~-----~~~~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~f~~~i~ 280 (323)
T 1xea_A 218 QFGITTEHVTASYDNVAYLFDSFTQG-----KMWRDNQESRV--ALKDWTP----------MLASKGFDAMVQDWLQVAA 280 (323)
T ss_dssp TBSSCEEEEEEEETTEEEEESSSSEE-----EEEETTEEEEE--ECCTTCC----------HHHHTTHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEEECCcEEEEecCccc-----ceEeeccCCcc--ccCCcCc----------hhhhccHHHHHHHHHHHHH
Confidence 5443 457999999999999753211 01111100000 0001110 1133568899999999999
Q ss_pred cCCCCCCCchHhHHHHHHHHHHHHHHHhhCCcc
Q 018020 325 NGSKPEQKWPIISRKTQLIIDAVKTSIERGFEP 357 (362)
Q Consensus 325 ~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g~~~ 357 (362)
+|.+|.. +.+++++++++++|+++|+++| .+
T Consensus 281 ~g~~~~~-~~~d~l~~~~i~~a~~~s~~~g-~~ 311 (323)
T 1xea_A 281 AGKLPTH-IIERNLASHQLAEAICQQITQQ-VT 311 (323)
T ss_dssp HTCCCHH-HHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred cCCCCCC-CHHHHHHHHHHHHHHHHHhhhc-cc
Confidence 8876644 4788999999999999999987 54
No 44
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=1.6e-46 Score=347.61 Aligned_cols=302 Identities=16% Similarity=0.182 Sum_probs=233.1
Q ss_pred CceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|+++||||||+|.||.. +++.+.+.++++++++||+++++++.+++++|++ +++|++++ ++++|+|+|+||+.
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~----~~~~~~~l--~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP----YADSLSSL--AASCDAVFVHSSTA 76 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC----BCSSHHHH--HTTCSEEEECSCTT
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCC----ccCcHHHh--hcCCCEEEEeCCch
Confidence 35799999999999996 9999998899999999999999999999999874 78999887 45799999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEEeee
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSF 164 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~~~~ 164 (362)
.|.+++..|+++||||+||||++.+.+++++|.++++++|+.+++++++||+|.++++|++| |++..++.....
T Consensus 77 ~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~k~~i------~~~~~i~~~~~~ 150 (319)
T 1tlt_A 77 SHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPLYGELKTQL------ATAASLRMDKHR 150 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCHHHHHHTTTG------GGCCEEEEEECC
T ss_pred hHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHh------CCCcEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999998 445555543321
Q ss_pred cCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEEEEEe
Q 018020 165 AGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCS 244 (362)
Q Consensus 165 ~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~~~~~ 244 (362)
.. .|. +. .++|.|.|+|+|.+|+++|++| .|++|++..... . +.++...++++|++|. +++.++
T Consensus 151 ~~-------~~~--p~-~~~g~l~d~g~H~id~~~~l~G--~~~~V~a~~~~~-~--~~~d~~~~~~~~~~g~-~~~~~~ 214 (319)
T 1tlt_A 151 SN-------SVG--PH-DLYFTLLDDYLHVVDTALWLSG--GKASLDGGTLLT-N--DAGEMLFAEHHFSAGP-LQITTC 214 (319)
T ss_dssp SS-------CCC--SS-CHHHHHHHTHHHHHHHHHHHTT--TCCCEEEEEEEE-C--TTCCEEEEEEEEEETT-EEEEEE
T ss_pred CC-------ccC--CC-CCCceeecccccHHHHHHHHcC--CCeEEEEEEEec-C--CCCcEEEEEEEEcCCC-EEEEEE
Confidence 11 111 11 1347899999999999999999 568999885322 1 2345667778888876 555555
Q ss_pred eeeC---CceeEEEEeccceEEEcceeccCCCCcceEEeccccccc-ccccccccCCcceeeecCCchhHHHHHHHHHHH
Q 018020 245 FLAN---MTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFN-DLVTGWVPLPSEHVVTTDIPQEACMVREFSRLV 320 (362)
Q Consensus 245 ~~~~---~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (362)
+... ...+++|+|++|++.+++... +......... .....|. .......|..++.+|+
T Consensus 215 ~~~~~~~~~~~~~i~G~~G~i~~~~~~~--------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~F~ 276 (319)
T 1tlt_A 215 MHRRAGSQRETVQAVTDGALIDITDMRE--------WREERGQGVVHKPIPGWQ----------STLEQRGFVGCARHFI 276 (319)
T ss_dssp EESSSSCCCEEEEEEETTEEEEEETTTE--------EEEESSSCEEECCCCTTC----------CHHHHTTHHHHHHHHH
T ss_pred EeccCCCCcEEEEEEECCCEEEEecCce--------EEEecCCceecccCCCCc----------cccccccHHHHHHHHH
Confidence 5443 245799999999999975321 1111100000 0000110 0112356889999999
Q ss_pred HhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhC
Q 018020 321 ANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 321 ~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g 354 (362)
++|++|.+|..+ .++++++++|++|+++|+++|
T Consensus 277 ~~i~~g~~~~~~-~~~~~~~~~i~~a~~~Sa~~g 309 (319)
T 1tlt_A 277 ECVQNQTVPQTA-GEQAVLAQRIVDKIWRDAMSE 309 (319)
T ss_dssp HHHHHTCCCTTS-GGGGSHHHHHHHHHHHHHTC-
T ss_pred HHHhcCCCCCCC-HHHHHHHHHHHHHHHHHhhcC
Confidence 999988876654 777999999999999999998
No 45
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=100.00 E-value=8.9e-47 Score=350.30 Aligned_cols=281 Identities=20% Similarity=0.186 Sum_probs=229.3
Q ss_pred ccCCceeEEEEEeccHHHH-HHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEc
Q 018020 3 TESQAAIRFGIIGAADIAR-KLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLP 80 (362)
Q Consensus 3 ~~~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~ 80 (362)
.++|+++||||||+|.+|. .|++.+++.|+++|++|||++++ ++|+ ..|+|++++|++ +++|+|+|+
T Consensus 20 ~~~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~-------~~g~----~~~~~~~~ll~~~~~vD~V~i~ 88 (330)
T 4ew6_A 20 FQSMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT-------VEGV----NSYTTIEAMLDAEPSIDAVSLC 88 (330)
T ss_dssp CCCCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC-------CTTS----EEESSHHHHHHHCTTCCEEEEC
T ss_pred cccCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh-------hcCC----CccCCHHHHHhCCCCCCEEEEe
Confidence 4567889999999999998 79999999999999999999864 2454 589999999998 899999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEE
Q 018020 81 LPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHS 160 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~ 160 (362)
||+..|++++++||++||||+||||++.+++++++|.++|+++|+.+++++++||+|.++++|++| ++|.||+|.....
T Consensus 89 tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i-~~g~iG~v~~~~~ 167 (330)
T 4ew6_A 89 MPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAAKAFL-ASTTIKSVHVIWK 167 (330)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHHHHHH-HSSCEEEEEEEEE
T ss_pred CCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHHHHHH-hcCCceEEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 8899998765432
Q ss_pred EeeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEE
Q 018020 161 CFSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVAT 240 (362)
Q Consensus 161 ~~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~ 240 (362)
..... ......|+.++ |||.++|+|+|.+|+++|++| .|.+|.+.........+.++.+.+.+++++|+.++
T Consensus 168 ~~~~~---~~~~~~w~~~~---ggG~l~d~g~H~ld~~~~l~g--~~~~v~~~~~~~~~~~~~~~~a~l~~~~~~g~~~~ 239 (330)
T 4ew6_A 168 EDVRH---WHPNQDWIWQA---GGLGVFDPGINALSIVTHILP--RPVFITGAVLEFPENRDAPIAADIHFRDADGLPVH 239 (330)
T ss_dssp CBHHH---HSTTCSGGGST---TSCTTHHHHHHHHHHHHHHSS--SCCEEEEEEEEEEESCSSCSEEEEEEECTTCCEEE
T ss_pred cCccc---cCCCCCceEcC---CCcEEEEchhHHHHHHHHHcC--CCeEEEEEEEecCCCCcccEEEEEEEEcCCceEEE
Confidence 21111 01123466543 568999999999999999999 68999887544444556778889999999999999
Q ss_pred EEEeeeeCC--ceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHHH
Q 018020 241 FSCSFLANM--TMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFSR 318 (362)
Q Consensus 241 ~~~~~~~~~--~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
++.+|..+. .++++|+|++|++.+++.. ..+..... ....+..+.|..++++
T Consensus 240 ~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~-------~~l~~~g~-------------------~~~~~~~~~y~~~~~~ 293 (330)
T 4ew6_A 240 AEFDWRQTGKQSWDIVAETAAGQMVLSEGG-------AKLSIDGR-------------------LTFAEPEQEYPSLYRR 293 (330)
T ss_dssp EEEESBCCSSCEEEEEEEESSCCEEEETTT-------TEEEETTC-------------------CC--CCCCHHHHHHHH
T ss_pred EEEEeccCCCCceEEEEEeCCEEEEEECCc-------cEEEECCE-------------------EEecCCCcchHHHHHH
Confidence 999987754 4689999999999998421 11111100 0123334578999999
Q ss_pred HHHhhhcCCCC
Q 018020 319 LVANIKNGSKP 329 (362)
Q Consensus 319 ~~~~i~~g~~~ 329 (362)
|+++|++|.++
T Consensus 294 F~~~v~~g~~~ 304 (330)
T 4ew6_A 294 FAEIIKAGKSD 304 (330)
T ss_dssp HHHHHHHTCCB
T ss_pred HHHHHHcCCCC
Confidence 99999988754
No 46
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=100.00 E-value=6.9e-48 Score=354.88 Aligned_cols=291 Identities=14% Similarity=0.081 Sum_probs=238.7
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh--------cCCCCcEE
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALL--------DDKDIDAV 77 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l--------~~~~~D~V 77 (362)
+++||||||+ |++|..|++.+++. +++++++||++++++ .+++.++ ++.+|+|+++++ +++++|+|
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~-~~~~~~~---~~~~~~~~~~ll~~~~~l~~~~~~vD~V 76 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVG-LVDSFFP---EAEFFTEPEAFEAYLEDLRDRGEGVDYL 76 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG-GGGGTCT---TCEEESCHHHHHHHHHHHHHTTCCCSEE
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHH-HHHhhCC---CCceeCCHHHHHHHhhhhcccCCCCcEE
Confidence 3699999999 68999999999987 799999999998864 4555553 347899999999 78899999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEE
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRT 157 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~ 157 (362)
+|+||+..|++++++||++||||+||||++.|++++++|.++|+++|+++++++++||+|.++++|++| ++| |+|..
T Consensus 77 ~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i-~~g--G~i~~ 153 (312)
T 3o9z_A 77 SIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERL-GQE--KGAKD 153 (312)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHH-HTC--CSCEE
T ss_pred EECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeehhcCHHHHHHHHHH-HcC--CCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 778 99999
Q ss_pred EEEEeeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCc
Q 018020 158 MHSCFSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGR 237 (362)
Q Consensus 158 i~~~~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~ 237 (362)
+++.+....+.. ...+|+.++..+| |.+.|+|+|.+|+++|++| .|++|++.. ..+|.+.++++|+||.
T Consensus 154 v~~~~~~~~~~~-~~~~w~~~~~~~g-G~l~d~g~H~id~~~~l~G--~~~~v~~~~-------~~~d~~~~~l~~~~g~ 222 (312)
T 3o9z_A 154 VVLTYVTGRGKW-YGKSWKVDEAKSG-GLATNIGIHFFDLLAWLFG--RALHVEVHA-------RTPTVNAGYLELEGAR 222 (312)
T ss_dssp EEEEEEECCCTT-GGGSGGGCHHHHC-CHHHHTTHHHHHHHHHHHC--CEEEEEEEE-------ECSSEEEEEEEETTEE
T ss_pred EEEEEEccCCCc-cccccccCcccCC-CeeeecccCHHHHHHHHhC--CCeEEEEEe-------cCCceEEEEEEECCCc
Confidence 999988654432 3457888887755 9999999999999999999 689998873 3567889999999998
Q ss_pred EEEEEEeeeeCCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHHHH
Q 018020 238 VATFSCSFLANMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVREFS 317 (362)
Q Consensus 238 ~~~~~~~~~~~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (362)
+..+ .+.......+++|+|++|++...... .+. ..+ ...|.+...
T Consensus 223 v~~~-~s~~~~~~~~~~v~G~~G~~~~~~~d----~qe--~~l----------------------------~~g~~~~h~ 267 (312)
T 3o9z_A 223 VRWF-LSIDPSFVPEPLRRQGKRTYRSIAVD----GEE--VEF----------------------------SEGFTDLHT 267 (312)
T ss_dssp EEEE-EESCGGGSCHHHHTTTCCEEEEEEET----TEE--EEC----------------------------CTTTTSCHH
T ss_pred EEEE-EEecCCCCCeEEEEecCcEEEEEeec----ccH--HHH----------------------------hcCChhhhH
Confidence 7555 55544455678999999999976431 000 000 011223344
Q ss_pred HHHHhhhcCCCCCCCchHhHHHHHHHHHHHHHHHhhC
Q 018020 318 RLVANIKNGSKPEQKWPIISRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 318 ~~~~~i~~g~~~~~~~~e~~l~~~~i~~a~~~S~~~g 354 (362)
.++..|..|+.. ..|++..+++++++|++|...+
T Consensus 268 ~~~~~i~~g~~~---g~~~~~~~~~~~~~ir~~~~~~ 301 (312)
T 3o9z_A 268 EVYRKTLAGEGF---GLDEAAEAIRVAALLRTLPLSQ 301 (312)
T ss_dssp HHHHHHHTTCCE---EHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHcCCCC---ChHHhHHHHHHHHHHhcCCCcC
Confidence 677777766633 6788999999999999776544
No 47
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=100.00 E-value=7.3e-41 Score=305.60 Aligned_cols=286 Identities=14% Similarity=0.073 Sum_probs=215.3
Q ss_pred CCccCCceeEEEEEeccHHHHHHHHHHhc---CCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEE
Q 018020 1 MATESQAAIRFGIIGAADIARKLSRAITL---APNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~G~~g~~~~~~~~~---~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V 77 (362)
|++ +++++||||||+|.||..|++.+.. .+++++++++|++. +++++|+ . +.|++++|+++++|+|
T Consensus 1 M~~-~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a~~~g~----~-~~~~~ell~~~~vD~V 69 (294)
T 1lc0_A 1 MIT-NSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LGSLDEV----R-QISLEDALRSQEIDVA 69 (294)
T ss_dssp CCC-CCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CCEETTE----E-BCCHHHHHHCSSEEEE
T ss_pred CCC-CCCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HHHHcCC----C-CCCHHHHhcCCCCCEE
Confidence 543 4678999999999999999999876 67899999999863 2344554 2 5899999999899999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEE
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRT 157 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~ 157 (362)
+|+||+..|++++++||++||||+||||++.+++++++|.++++++|+.+++++++||.|.++++|++| .+|.|+.
T Consensus 70 ~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i-~~g~i~~--- 145 (294)
T 1lc0_A 70 YICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELLMEEFEFLRREV-LGKELLK--- 145 (294)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHH-TTCCEEE---
T ss_pred EEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhccHHHHHHHHHH-hcCCeeE---
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 7777621
Q ss_pred EEEEeeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCc
Q 018020 158 MHSCFSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGR 237 (362)
Q Consensus 158 i~~~~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~ 237 (362)
....+..... +.+|+..+ ...|+|.+|++++++| +|.+|.+..... .....+.+.+.+++.+|+
T Consensus 146 g~~~~~~~~~----~~~~~~~~--------~~~Gi~~l~~~~~l~G--~~~~v~a~~~~~--~~~~~~~~~~~~~~~~~~ 209 (294)
T 1lc0_A 146 GSLRFTASPL----EEERFGFP--------AFSGISRLTWLVSLFG--ELSLISATLEER--KEDQYMKMTVQLETQNKG 209 (294)
T ss_dssp EEEEEEESCC----CHHHHCCH--------HHHTHHHHHHHHHHHC--SCEEEEEEEEEE--GGGTEEEEEEEEECTTSC
T ss_pred EEEEEecCCC----ChhhccCh--------hhcCccHHHHHHHhcC--CceEEEEEEeec--CccccccEEEEEECCCCc
Confidence 1222221111 11121111 1247999999999999 688888874321 223567888999999999
Q ss_pred EEEEEEeeee--CCceeEEEEeccceEEEcceeccCCCCcceEEecccccccccccccccCCcceeeecCCchhHHHHHH
Q 018020 238 VATFSCSFLA--NMTMDITATGTNGSLQLHDFIIPFREEEASYFTNTRCFFNDLVTGWVPLPSEHVVTTDIPQEACMVRE 315 (362)
Q Consensus 238 ~~~~~~~~~~--~~~~~~~v~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (362)
.+++..+... +...++++.|++|.+..... .......+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------------------------------------~~~~~~~~~~~ 252 (294)
T 1lc0_A 210 LLSWIEEKGPGLKRNRYVNFQFTSGSLEEVPS-------------------------------------VGVNKNIFLKD 252 (294)
T ss_dssp EEEEEEEECTTCCCEEEEEEEESSCEECCCCC-------------------------------------CSCCTTHHHHH
T ss_pred eEEEEeccccccCCCcEEEEEecCCeeEEcCC-------------------------------------CCCcCceehHh
Confidence 8877654432 22346888888886532100 00112344555
Q ss_pred HHHHHHhhhcCCCCCCCchHh--HHHHHHHHHHHHHHHhhC
Q 018020 316 FSRLVANIKNGSKPEQKWPII--SRKTQLIIDAVKTSIERG 354 (362)
Q Consensus 316 ~~~~~~~i~~g~~~~~~~~e~--~l~~~~i~~a~~~S~~~g 354 (362)
..+|+++|+++.++...+.|+ +++++++++|+++|++++
T Consensus 253 ~~~F~~~i~~~~~~~~~~~~~~~~~~~l~~~~ai~~s~~~~ 293 (294)
T 1lc0_A 253 QDIFVQKLLDQVSAEDLAAEKKRIMHCLGLASDIQKLCHQK 293 (294)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHccCCCchhcChHHhhhhHHHHHHHHHHHHhhcC
Confidence 899999999665433334666 999999999999999875
No 48
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=100.00 E-value=5.3e-32 Score=253.30 Aligned_cols=220 Identities=15% Similarity=0.162 Sum_probs=164.0
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCC-CcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAP-NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~-~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
.++||+|||+| +|+.|++.+++.+ +++|+||||++++++++++++||++ +|+|+++|+++ +|+|+|+||+..
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~----~~~~~~~l~~~--~D~v~i~~p~~~ 78 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIP----LYTSPEQITGM--PDIACIVVRSTV 78 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCC----EESSGGGCCSC--CSEEEECCC--C
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCC----EECCHHHHhcC--CCEEEEECCCcc
Confidence 48999999999 5999999998887 5999999999999999999999984 79999999975 999999999999
Q ss_pred c----HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhc--CCCCccceEEEE
Q 018020 86 H----VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVS--DPQRFGQLRTMH 159 (362)
Q Consensus 86 h----~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~--~~g~iG~i~~i~ 159 (362)
| ++++++||++||||+||||+ +.+|+++|.++|+++|+.++||+++||.|.++++.+..+ ..+..+++.+++
T Consensus 79 h~~~~~~~a~~al~aGkhVl~EKPl--~~~ea~~l~~~A~~~g~~~~v~~~yr~~p~vr~~i~~~~~l~~~~~~~~~~i~ 156 (372)
T 4gmf_A 79 AGGAGTQLARHFLARGVHVIQEHPL--HPDDISSLQTLAQEQGCCYWINTFYPHTRAGRTWLRDAQQLRRCLAKTPPVVH 156 (372)
T ss_dssp TTSHHHHHHHHHHHTTCEEEEESCC--CHHHHHHHHHHHHHHTCCEEEECSGGGSHHHHHHHHHHHHHHHHHTSCCSEEE
T ss_pred cchhHHHHHHHHHHcCCcEEEecCC--CHHHHHHHHHHHHHcCCEEEEcCcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 8 89999999999999999997 789999999999999999999999999999876644321 234456777777
Q ss_pred EEeeecCCcccccCccCcCCCCCCCcccccccchHHHHHHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEE
Q 018020 160 SCFSFAGDAEFLKNDIRVKPDLDGLGALGDAGWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVA 239 (362)
Q Consensus 160 ~~~~~~~~~~~~~~~w~~~~~~~ggg~l~~~g~h~id~~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~ 239 (362)
+.++. +...+.+|++...+|...+........ .. . ..-.+.... ++..+
T Consensus 157 ~~~s~------------------------q~~y~~~dil~~alg~~~~~~~~~~~~---~~-~--~~~~l~~~~-~~vp~ 205 (372)
T 4gmf_A 157 ATTSR------------------------QLLYSTLDLLLLALGVDTAAVECDVVG---SF-S--DFHCLRLFW-PEGEA 205 (372)
T ss_dssp EEECT------------------------TTHHHHHHHHHHHHTCCGGGCEEEEEE---EC-S--SEEEEEEEE-TTEEE
T ss_pred EEecc------------------------ccccchHHHHHHhcCCCcccccccccC---CC-C--CeeEEEEEe-CCeeE
Confidence 65431 223467888888877543322222210 00 1 112233444 35555
Q ss_pred EEEEe-eeeCC--------ceeEEEEeccceEEEcc
Q 018020 240 TFSCS-FLANM--------TMDITATGTNGSLQLHD 266 (362)
Q Consensus 240 ~~~~~-~~~~~--------~~~~~v~G~~G~i~~~~ 266 (362)
++... +..+. -.++++.++.|++.+.+
T Consensus 206 ~l~v~n~l~p~dpD~~~~l~hri~l~~~~G~L~L~~ 241 (372)
T 4gmf_A 206 CLLLQRYLDPDDPDMHSLIMHRLLLGWPEGHLSLEA 241 (372)
T ss_dssp EEEEECEECTTSTTCCCSCSEEEEEEETTEEEEECS
T ss_pred EEEEeceecCCCCCccceEEEEEEEEcCCEEEEeec
Confidence 55543 22221 13688888999988875
No 49
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=99.95 E-value=2.5e-30 Score=236.72 Aligned_cols=142 Identities=14% Similarity=0.123 Sum_probs=122.4
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
|+++||||||+|.||..|++.++++|+++++++||+++++++. +|++ +.+++++++..++|+|+++||+..
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~----~g~~-----~~~~~~l~~~~~~DvViiatp~~~ 77 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF----ELQP-----FRVVSDIEQLESVDVALVCSPSRE 77 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-----------CCTT-----SCEESSGGGSSSCCEEEECSCHHH
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH----cCCC-----cCCHHHHHhCCCCCEEEECCCchh
Confidence 5689999999999999999999999999999999999887654 6653 455666666578999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCC-CCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEE
Q 018020 86 HVKWAISVAQKKKHLLMEKPM-ALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMH 159 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~-~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~ 159 (362)
|.+++..++++||||+||||+ +.+.+++++|.++++++|+.+++++ ||.|.++.++++| ++|.+|++..+.
T Consensus 78 h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~--~~~p~~~~~~~~i-~~g~lG~~~~~~ 149 (304)
T 3bio_A 78 VERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIAS--GWDPGSDSVVRTL-MQAIVPKGITYT 149 (304)
T ss_dssp HHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSC--BBTTBHHHHHHHH-HHHHSCEEEEEE
T ss_pred hHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeC--CCCHHHHHHHHHH-HCCCCCCcEEEE
Confidence 999999999999999999997 8899999999999999999999996 9999999999999 889999998654
No 50
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=99.90 E-value=7.7e-24 Score=200.77 Aligned_cols=146 Identities=17% Similarity=0.202 Sum_probs=130.2
Q ss_pred CCceeEEEEEeccHHHHHHHHHHhc---------CCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCc
Q 018020 5 SQAAIRFGIIGAADIARKLSRAITL---------APNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDID 75 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~~~~~~~~---------~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D 75 (362)
||+++||||||+|.+|..++..+.+ .++++|++|||+++++++.+.. +..+++|++++++++++|
T Consensus 7 MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~------~~~~~~d~~ell~d~diD 80 (444)
T 3mtj_A 7 GMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG------GLPLTTNPFDVVDDPEID 80 (444)
T ss_dssp SCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT------TCCEESCTHHHHTCTTCC
T ss_pred hhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc------cCcccCCHHHHhcCCCCC
Confidence 4578999999999999988877653 2689999999999988776632 236899999999999999
Q ss_pred EEEEcCCC-cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE-EeeecccChhHHHHHHhhcCCCCcc
Q 018020 76 AVYLPLPT-SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM-DGTMWVHNPRTAQMKEFVSDPQRFG 153 (362)
Q Consensus 76 ~V~i~~~~-~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~-v~~~~r~~p~~~~~k~~i~~~g~iG 153 (362)
+|+++||+ ..|.+++++||++||||+|||| +.+.+++++|.++|+++|+.++ .++..++.|.++.+|+++ ..+.||
T Consensus 81 vVve~tp~~~~h~~~~~~AL~aGKhVvtenk-al~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~LrelL-~~~~Ig 158 (444)
T 3mtj_A 81 IVVELIGGLEPARELVMQAIANGKHVVTANK-HLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKALREGL-TANRIE 158 (444)
T ss_dssp EEEECCCSSTTHHHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHHHHTTT-TTSCEE
T ss_pred EEEEcCCCchHHHHHHHHHHHcCCEEEECCc-ccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHHHHHHH-hCCCCc
Confidence 99999996 8999999999999999999999 7899999999999999999985 677889999999999999 888888
Q ss_pred ceEEE
Q 018020 154 QLRTM 158 (362)
Q Consensus 154 ~i~~i 158 (362)
+|..|
T Consensus 159 ~I~GI 163 (444)
T 3mtj_A 159 WLAGI 163 (444)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88876
No 51
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=99.85 E-value=2.6e-21 Score=182.68 Aligned_cols=129 Identities=17% Similarity=0.202 Sum_probs=113.8
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc-CCC------------------CCCcccCCHH
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN-NFP------------------PDAKVYGSYE 66 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~ 66 (362)
++++||||||+|.||+.|+..+.+.|+++|++|||+++++++.+++++ |.+ ..+.+|+|++
T Consensus 21 ~k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~e 100 (446)
T 3upl_A 21 GKPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDND 100 (446)
T ss_dssp TCCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHH
T ss_pred CCceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHH
Confidence 568999999999999999999999999999999999999999998875 610 1235799999
Q ss_pred HHhcCCCCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeeccc
Q 018020 67 ALLDDKDIDAVYLPLPTS-MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVH 135 (362)
Q Consensus 67 e~l~~~~~D~V~i~~~~~-~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~ 135 (362)
++|+++++|+|+++||+. .|++++++||++||||+|+++ ..+..++.+|.++|+++|+.+++...-+.
T Consensus 101 eLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk-~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp 169 (446)
T 3upl_A 101 LILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNV-EADVTIGPYLKAQADKQGVIYSLGAGDEP 169 (446)
T ss_dssp HHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHHHTCCEEECTTSHH
T ss_pred HHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCc-ccCHHHHHHHHHHHHHhCCeeeecCCcch
Confidence 999999999999999985 689999999999999999665 46789999999999999999998875544
No 52
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=99.85 E-value=7e-22 Score=181.19 Aligned_cols=145 Identities=17% Similarity=0.268 Sum_probs=119.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcC--------CCcEEEEEEcCCHHHH------HHHHHHcCCCCCCcccC--CHHHHhcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLA--------PNAVLSAVASRSLEKA------TNFAKANNFPPDAKVYG--SYEALLDD 71 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~--------~~~~vv~v~d~~~~~~------~~~~~~~~~~~~~~~~~--~~~e~l~~ 71 (362)
++||||||+|.+|+.+++.+.+. ++++|++|||++.++. +.++..++.. .+++ |+++++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~---~~~~~~d~~~ll~~ 78 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETG---MLRDDAKAIEVVRS 78 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHS---SCSBCCCHHHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCc---cccCCCCHHHHhcC
Confidence 59999999999999999999887 8999999999975432 2233333211 4566 99999999
Q ss_pred CCCcEEEEcCCCccc----HHHHHHHHHcCCeEEEe--CCCCCCHHHHHHHHHHHHHcCCEEE-EeeecccChhHHHHHH
Q 018020 72 KDIDAVYLPLPTSMH----VKWAISVAQKKKHLLME--KPMALNVAEFDVILNACEENGVQLM-DGTMWVHNPRTAQMKE 144 (362)
Q Consensus 72 ~~~D~V~i~~~~~~h----~~~~~~al~~gk~V~~E--KP~~~~~~~~~~l~~~a~~~~~~~~-v~~~~r~~p~~~~~k~ 144 (362)
+++|+|+++||+..| .+++..||++||||+|| ||++ .++++|.++|+++|+.++ .+...++.|.++.+|+
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla---~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l~~ 155 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLV---AEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKR 155 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHH---HHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHHHT
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhH---HHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHHHH
Confidence 999999999999999 99999999999999999 9987 478999999999999765 5777899999999999
Q ss_pred hhcCCCCccceEEEE
Q 018020 145 FVSDPQRFGQLRTMH 159 (362)
Q Consensus 145 ~i~~~g~iG~i~~i~ 159 (362)
++ ..+.||+|..|.
T Consensus 156 ~l-~~~~I~~I~GIl 169 (327)
T 3do5_A 156 YL-ALCEIESVKGIF 169 (327)
T ss_dssp TT-TTSCEEEEEEEC
T ss_pred Hh-hCCCccEEEEEE
Confidence 99 766666666543
No 53
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=99.82 E-value=2.1e-20 Score=172.04 Aligned_cols=128 Identities=13% Similarity=0.167 Sum_probs=113.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
+++||+|||+|.||+.+++.+.+.+++++++++|+++++ +++ ++ +..++|+++++ .++|+|+++||+..|
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~--~g----v~~~~d~~~ll--~~~DvViiatp~~~h 71 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK--TP----VFDVADVDKHA--DDVDVLFLCMGSATD 71 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS--SC----EEEGGGGGGTT--TTCSEEEECSCTTTH
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc--CC----CceeCCHHHHh--cCCCEEEEcCCcHHH
Confidence 589999999999999999999999999999999998654 222 44 35789999988 479999999999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHH-HHHHHHHHHcCCEEEEeeecccChhHHHHHHhh
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEF-DVILNACEENGVQLMDGTMWVHNPRTAQMKEFV 146 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~-~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i 146 (362)
.+.+..++++|+||+||||++.+.+++ ++|.+++++++. +.+.++ ||.|.+..+++++
T Consensus 72 ~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~-v~v~~~-~~~p~~~~l~~~l 130 (320)
T 1f06_A 72 IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGN-VALVST-GWDPGMFSINRVY 130 (320)
T ss_dssp HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTC-EEECSC-SBTTBHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCC-EEEEec-CChHHHHHHHHHH
Confidence 999999999999999999999999999 999999997664 555666 9999999999998
No 54
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=99.81 E-value=1.6e-20 Score=173.14 Aligned_cols=145 Identities=17% Similarity=0.167 Sum_probs=117.1
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCC-------CcEEEEEEcCCHHHHHH------HHHHc---CCCCCCcccC---CHH
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAP-------NAVLSAVASRSLEKATN------FAKAN---NFPPDAKVYG---SYE 66 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~-------~~~vv~v~d~~~~~~~~------~~~~~---~~~~~~~~~~---~~~ 66 (362)
|+++||||||+|.+|+.+++.+.+.+ +++|++|+|++.++++. +++.+ +++ .+++ |++
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~ 80 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLD---SLEYESISAS 80 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGG---GCCSEECCHH
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcc---cccCCCCCHH
Confidence 56899999999999999999987765 68999999998765433 23322 221 2566 999
Q ss_pred HHhcCCCCcEEEEcCCCc----ccHHHHHHHHHcCCeEEE--eCCCCCCHHHHHHHHHHHHHcCCEEE-EeeecccChhH
Q 018020 67 ALLDDKDIDAVYLPLPTS----MHVKWAISVAQKKKHLLM--EKPMALNVAEFDVILNACEENGVQLM-DGTMWVHNPRT 139 (362)
Q Consensus 67 e~l~~~~~D~V~i~~~~~----~h~~~~~~al~~gk~V~~--EKP~~~~~~~~~~l~~~a~~~~~~~~-v~~~~r~~p~~ 139 (362)
+++ ++++|+|+++||+. .|.+++++||++||||+| +||+ .+++++|.++|+++|+.+. .+...++.|.+
T Consensus 81 ~ll-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pl---a~~~~eL~~~A~~~gv~~~~ea~vg~giPii 156 (331)
T 3c8m_A 81 EAL-ARDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGL---ANFWPEIMEYARSNNRRIRYEATVAGGVPLF 156 (331)
T ss_dssp HHH-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHH---HHHHHHHHHHHHHHTCCEECGGGSSTTSCCH
T ss_pred HHh-CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhh---HHHHHHHHHHHHHcCCEEEEEeecccccHHH
Confidence 999 88999999999996 899999999999999998 3575 5789999999999998664 34455677999
Q ss_pred HHHHHhhcCCCCccceEEE
Q 018020 140 AQMKEFVSDPQRFGQLRTM 158 (362)
Q Consensus 140 ~~~k~~i~~~g~iG~i~~i 158 (362)
+.+|+++ ..+.|++|..+
T Consensus 157 ~~l~~~l-~g~~I~~I~GI 174 (331)
T 3c8m_A 157 SFIDYSV-LPSRIKKFRGI 174 (331)
T ss_dssp HHHHHHS-TTCCCCEEEEE
T ss_pred HHHHHHh-hcCcccEEEEE
Confidence 9999999 76677666553
No 55
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=99.76 E-value=2.1e-19 Score=166.82 Aligned_cols=146 Identities=10% Similarity=0.155 Sum_probs=118.1
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCC---CcEEEEEEcCCHHHHHHHHHHc-CCCCCCcccCCHHHHhcCC-----CC--
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAP---NAVLSAVASRSLEKATNFAKAN-NFPPDAKVYGSYEALLDDK-----DI-- 74 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~---~~~vv~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~e~l~~~-----~~-- 74 (362)
.+++||||||+|.+|+.+++.+.+.+ ++++++|+|++.. .++++| |+ ..+++++++++++ ++
T Consensus 2 ~k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~---~~~~~~~gi----~~~~~~~e~l~~~~~~~~did~ 74 (358)
T 1ebf_A 2 TKVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERS---LISKDFSPL----NVGSDWKAALAASTTKTLPLDD 74 (358)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE---EECSSCSCC----SCTTCHHHHHHTCCCBCCCHHH
T ss_pred CceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChh---hhccccCCC----CccccHHHHHhcccCCCCCHHH
Confidence 35899999999999999999998876 6899999997532 233444 54 3568999998765 45
Q ss_pred -----------cEEEEcCCCcccHHHHHHHHHcCCeEEE--eCCCCCCHHHHHHHHHHHHHcCCEEEE-eeecccChhHH
Q 018020 75 -----------DAVYLPLPTSMHVKWAISVAQKKKHLLM--EKPMALNVAEFDVILNACEENGVQLMD-GTMWVHNPRTA 140 (362)
Q Consensus 75 -----------D~V~i~~~~~~h~~~~~~al~~gk~V~~--EKP~~~~~~~~~~l~~~a~~~~~~~~v-~~~~r~~p~~~ 140 (362)
|+|++|||+..|.....+||++||||+| |||++.+.+++++|. +|+++|+.+.. +...++.|.++
T Consensus 75 v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~~gv~~~~Ea~vg~giPii~ 153 (358)
T 1ebf_A 75 LIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKPTNGFVYHEATVGAGLPIIS 153 (358)
T ss_dssp HHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCTTCCCEECGGGTTTTSSCHH
T ss_pred HHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHHcCCEEEEccccccCCcHHH
Confidence 7999999999999999999999999999 999999999999999 99999987643 23445569999
Q ss_pred HHHHhhcCCCCccceEEEEEEe
Q 018020 141 QMKEFVSDPQRFGQLRTMHSCF 162 (362)
Q Consensus 141 ~~k~~i~~~g~iG~i~~i~~~~ 162 (362)
.+|+++ +.| ++|..++..+
T Consensus 154 ~l~~~l-~~G--~~I~~I~GIl 172 (358)
T 1ebf_A 154 FLREII-QTG--DEVEKIEGIF 172 (358)
T ss_dssp HHHHHH-HHT--CCEEEEEEEC
T ss_pred HHHHHH-HcC--CCeEEEEEEE
Confidence 999999 544 3555555543
No 56
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=99.75 E-value=2.3e-19 Score=164.56 Aligned_cols=136 Identities=11% Similarity=0.150 Sum_probs=112.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCC--------CcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAP--------NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVY 78 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~--------~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~ 78 (362)
+++||||||+|.+|+.+++.+++.+ +++|++|+|++.++.+. ++. ..+++|+++++ ++|+|+
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~----~~~---~~~~~d~~~ll---~iDvVv 71 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRA----IPQ---ELLRAEPFDLL---EADLVV 71 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCS----SCG---GGEESSCCCCT---TCSEEE
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhc----cCc---ccccCCHHHHh---CCCEEE
Confidence 5799999999999999999998887 78999999998764332 221 25789999999 699999
Q ss_pred EcCCCcc-cHHHHHHHHHcCCeEEE--eCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccce
Q 018020 79 LPLPTSM-HVKWAISVAQKKKHLLM--EKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQL 155 (362)
Q Consensus 79 i~~~~~~-h~~~~~~al~~gk~V~~--EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i 155 (362)
++||+.. |.+++++||++||||+| +||++ +++++|.++|+++ ..++.+..-.+.|.++.+| .+ ..+.||+|
T Consensus 72 e~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla---~~~~eL~~~A~~~-~~~~Ea~vg~giPii~~l~-~l-~~~~I~~I 145 (332)
T 2ejw_A 72 EAMGGVEAPLRLVLPALEAGIPLITANKALLA---EAWESLRPFAEEG-LIYHEASVMAGTPALSFLE-TL-RGSELLEL 145 (332)
T ss_dssp ECCCCSHHHHHHHHHHHHTTCCEEECCHHHHH---HSHHHHHHHHHTT-CEECGGGTTTTSSSHHHHH-HH-TTSEEEEE
T ss_pred ECCCCcHHHHHHHHHHHHcCCeEEECCchhHH---HHHHHHHHHHHhC-CeEEEEEcccCCHHHHHHH-Hh-cCCCcceE
Confidence 9999985 57899999999999999 78976 7899999999988 4555555566679999999 88 77777776
Q ss_pred EEE
Q 018020 156 RTM 158 (362)
Q Consensus 156 ~~i 158 (362)
..+
T Consensus 146 ~gI 148 (332)
T 2ejw_A 146 HGI 148 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 57
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=99.75 E-value=4.7e-18 Score=155.49 Aligned_cols=150 Identities=12% Similarity=0.118 Sum_probs=117.2
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcC------CCcEEEEEEcCCHH---------HHHHHHHHcC-CCCCCcccCCHHHHh
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLA------PNAVLSAVASRSLE---------KATNFAKANN-FPPDAKVYGSYEALL 69 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~------~~~~vv~v~d~~~~---------~~~~~~~~~~-~~~~~~~~~~~~e~l 69 (362)
|+++||+|||+|.+|+.+++.+.+. ++++|++|+|++.+ +.....++++ ++ . ..+ |+++++
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~-~~~-d~~e~l 78 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-D-RAF-SGPEDL 78 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-S-SBC-CSGGGG
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-c-ccC-CHHHHh
Confidence 5689999999999999999988765 68999999998753 3334445555 32 1 134 889999
Q ss_pred cCCCCcEEEEcCCCccc----HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE-EeeecccChhHHHHHH
Q 018020 70 DDKDIDAVYLPLPTSMH----VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM-DGTMWVHNPRTAQMKE 144 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~h----~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~-v~~~~r~~p~~~~~k~ 144 (362)
+++++|+|+.+||+..| .+++.+||++||||+++++. ...+++++|.++|+++|+.++ .+.--...|.++.+++
T Consensus 79 ~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~-~la~~~~eL~~lA~~~g~~~~~Ea~vg~giPii~~l~~ 157 (325)
T 3ing_A 79 MGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKS-GLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLDY 157 (325)
T ss_dssp TTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCH-HHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHHH
T ss_pred cCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCch-hHHHHHHHHHHHHHHcCCeEEEEeeecccCHHHHHHHH
Confidence 99999999999999877 58999999999999997542 234899999999999999764 3455567899999999
Q ss_pred hhcCCCCccceEEEEEEee
Q 018020 145 FVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 145 ~i~~~g~iG~i~~i~~~~~ 163 (362)
++ .. ++|..++..++
T Consensus 158 ~l-~g---~~I~~i~Gi~n 172 (325)
T 3ing_A 158 SI-LP---SKVKRFRGIVS 172 (325)
T ss_dssp TC-TT---CCEEEEEEECC
T ss_pred Hh-hC---CCeeEEEEEEE
Confidence 98 54 45555655554
No 58
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.74 E-value=2.2e-20 Score=170.49 Aligned_cols=99 Identities=22% Similarity=0.264 Sum_probs=89.7
Q ss_pred ceeEEEEEeccHHHHHHHHHHhc-CCCcEEEEEEcCCHHH-HHHHHHHcCCCCCCcccCCHHHHhcC---CCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITL-APNAVLSAVASRSLEK-ATNFAKANNFPPDAKVYGSYEALLDD---KDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~-~~~~~vv~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~~---~~~D~V~i~~ 81 (362)
+++||||||+|.+|..++..+.+ +|++++++++|+++++ ++++++++|++ ..++++++++++ +++|+|+++|
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~---~~~~~~e~ll~~~~~~~iDvV~~at 79 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVT---TTYAGVEGLIKLPEFADIDFVFDAT 79 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCC---EESSHHHHHHHSGGGGGEEEEEECS
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCC---cccCCHHHHHhccCCCCCcEEEECC
Confidence 47999999999999999999865 8999999999999888 78889999864 356789999987 7899999999
Q ss_pred CCcccHHHHHHHHHc--CCeEEEeCCCCC
Q 018020 82 PTSMHVKWAISVAQK--KKHLLMEKPMAL 108 (362)
Q Consensus 82 ~~~~h~~~~~~al~~--gk~V~~EKP~~~ 108 (362)
|+..|.+++..++++ ||||+||||.+.
T Consensus 80 p~~~h~~~a~~al~a~~Gk~Vi~ekp~~~ 108 (312)
T 1nvm_B 80 SASAHVQNEALLRQAKPGIRLIDLTPAAI 108 (312)
T ss_dssp CHHHHHHHHHHHHHHCTTCEEEECSTTCS
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcccc
Confidence 999999999999999 999999999763
No 59
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=99.73 E-value=1.3e-16 Score=147.79 Aligned_cols=213 Identities=13% Similarity=0.081 Sum_probs=160.6
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCC-cEEEEE-EcCCHHHHHHHHHHcCCCCCCccc----------------------
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPN-AVLSAV-ASRSLEKATNFAKANNFPPDAKVY---------------------- 62 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~-~~vv~v-~d~~~~~~~~~~~~~~~~~~~~~~---------------------- 62 (362)
++||+|+|+ |++|..++..++++|+ ++++++ ++++.+++.+.+++|+.. ..+.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~--~v~v~d~~~~~~l~~~l~~~~~~v~~ 81 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAK--RAVIADPSLYNDLKEALAGSSVEAAA 81 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCS--EEEESCGGGHHHHHHHTTTCSSEEEE
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCc--EEEEcChHHHHHHHHHhccCCcEEEe
Confidence 489999999 9999999999999987 999999 999999999999999853 1111
Q ss_pred --CCHHHHhcCCCCcEEEEcCCCcccHHHHHHHHHcCCeEEEe-CCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhH
Q 018020 63 --GSYEALLDDKDIDAVYLPLPTSMHVKWAISVAQKKKHLLME-KPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRT 139 (362)
Q Consensus 63 --~~~~e~l~~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~E-KP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~ 139 (362)
+++.++++++ +|+|+.+++...+.+.+.+|+++||||++. |+ ..+.....|.++|+++|+.+... .+..
T Consensus 82 g~~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE--~lv~~G~~l~~~A~~~gv~liPV-----Dseh 153 (388)
T 1r0k_A 82 GADALVEAAMMG-ADWTMAAIIGCAGLKATLAAIRKGKTVALANKE--SLVSAGGLMIDAVREHGTTLLPV-----DSEH 153 (388)
T ss_dssp SHHHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHHTTSEEEECCSH--HHHTTHHHHHHHHHHHTCEEEEC-----SHHH
T ss_pred CccHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcH--HHHhhHHHHHHHHHHcCCEEEEe-----chhH
Confidence 1223677777 999999999999999999999999999996 87 57788899999999999998643 6678
Q ss_pred HHHHHhhcCCCCccceEEEEEEeeecCCccccc--------------CccCcCCCC-CCCcccccccchHHHHHHHHccC
Q 018020 140 AQMKEFVSDPQRFGQLRTMHSCFSFAGDAEFLK--------------NDIRVKPDL-DGLGALGDAGWYGIRSILWANDY 204 (362)
Q Consensus 140 ~~~k~~i~~~g~iG~i~~i~~~~~~~~~~~~~~--------------~~w~~~~~~-~ggg~l~~~g~h~id~~~~l~g~ 204 (362)
..+++.+ ..+.+++|..+...-+..+...+.. .+|..-... -....+.|-|-|.++ .+||||.
T Consensus 154 ~Ai~q~L-~g~~i~~v~~IilTaSGGpfr~~~~~~l~~vt~~~Al~hp~W~mG~KitiDSAtm~NkglevIE-a~~Lf~~ 231 (388)
T 1r0k_A 154 NAIFQCF-PHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIE-AFHLFQI 231 (388)
T ss_dssp HHHHHHC-CTTCGGGEEEEEEEECCCTTTTCCHHHHTTCCHHHHHC------CHHHHHHHHHTHHHHHHHHH-HHHHHCC
T ss_pred HHHHHHh-hCCCccceeEEEEEeecccccCCCHHHHhcCCHHHhccCCCCCCcchhhhHHHHHHcCcCcccc-ccccCCC
Confidence 8999999 7778888887766654321111100 123321000 012567888999999 9999995
Q ss_pred CCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcEEE
Q 018020 205 ELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVAT 240 (362)
Q Consensus 205 ~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~ 240 (362)
+++++.....+ .+..+.+++|.||.+..
T Consensus 232 -~~~~I~vvvhp-------qsiihsmV~f~dGsv~a 259 (388)
T 1r0k_A 232 -PLEKFEILVHP-------QSVIHSMVEYLDGSILA 259 (388)
T ss_dssp -CGGGEEEEECT-------TCCEEEEEEETTSCEEE
T ss_pred -CHHHeeeeech-------hHeeEEEEEEcCCcEEE
Confidence 47888887432 23668999999998743
No 60
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=99.73 E-value=4.7e-17 Score=147.68 Aligned_cols=208 Identities=12% Similarity=0.077 Sum_probs=158.0
Q ss_pred eeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEE-EcCCHHHHHHHHHHcCCCCCCccc-----CCH--------------H
Q 018020 8 AIRFGIIG-AADIARKLSRAITLAPNAVLSAV-ASRSLEKATNFAKANNFPPDAKVY-----GSY--------------E 66 (362)
Q Consensus 8 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v-~d~~~~~~~~~~~~~~~~~~~~~~-----~~~--------------~ 66 (362)
+.||+|+| +|+||..++..++++++++|+++ ++++.+.+.+.+++|+.. ++ .++ .
T Consensus 3 ~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~----~v~v~~~~~~~~~l~~~~~G~~~l~ 78 (376)
T 3a06_A 3 ERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVK----NVAITGDVEFEDSSINVWKGSHSIE 78 (376)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTCC----EEEECSSCCCCCSSSEEEESTTHHH
T ss_pred cceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCCC----EEEEccHHHHHHHHHHHccCHHHHH
Confidence 47899999 69999999999988877999999 899999999999999842 33 333 5
Q ss_pred HHhcCCCCcEEEEcCCCcccHHHHHHHHHcCCeEEE-eCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHh
Q 018020 67 ALLDDKDIDAVYLPLPTSMHVKWAISVAQKKKHLLM-EKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEF 145 (362)
Q Consensus 67 e~l~~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~-EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~ 145 (362)
++++.+++|+|+++++...|...+..|+++||||.+ +| ...+..+..+.++++++|..++.-.+ ++++.+|.++
T Consensus 79 el~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANK--EsLV~aG~li~~~a~~~g~~llPVDS-EHsAifQ~L~-- 153 (376)
T 3a06_A 79 EMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANK--ESLVCGGFLVKKKLKEKGTELIPVDS-EHSAIFQVME-- 153 (376)
T ss_dssp HHHHHHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCS--HHHHHHHHHHHHHHHHHCCEEEECSH-HHHHHHHHCC--
T ss_pred HHhcCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeCh--HHHHhhHHHHHHHHHHcCCEEEEEcc-ccCHHHHHHH--
Confidence 888777899999999999999999999999999999 99 56788999999999999999998776 7777766664
Q ss_pred hcCCCCccceEEEEEEeeecCCccc-------------c-cCccCcCCCC-CCCcccccccchHHHHHHHHccCCCCcEE
Q 018020 146 VSDPQRFGQLRTMHSCFSFAGDAEF-------------L-KNDIRVKPDL-DGLGALGDAGWYGIRSILWANDYELPKTV 210 (362)
Q Consensus 146 i~~~g~iG~i~~i~~~~~~~~~~~~-------------~-~~~w~~~~~~-~ggg~l~~~g~h~id~~~~l~g~~~~~~V 210 (362)
+.+++| -..-+..+...+ . .++|..-+.. -...-|.+-|-|.|+ ..||||. ++++|
T Consensus 154 ----~~v~ki---iLTASGGpFr~~~~~~l~~vt~~~Al~HPnW~MG~KITiDSATmmNKGlEvIE-A~wLF~~-~~~~I 224 (376)
T 3a06_A 154 ----PEVEKV---VLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLE-AMELFEL-PFEKI 224 (376)
T ss_dssp ----SSCSEE---EEEECCCTTSSSCHHHHTTCCGGGTCCCSSCCCCHHHHHHHHHTHHHHHHHHH-HHHHHTC-CGGGE
T ss_pred ----hhhceE---EEeccCCcccCCCHHHHhhCCHHHhccCCCCCCCCeEEecHHHHHHHHHHHHH-HHHHcCC-ChheE
Confidence 334543 333222211111 0 0234321100 012567888999999 9999995 47888
Q ss_pred EEeeccccCCCCeeEeeEEEEEeCCCcEEE
Q 018020 211 IAMHGPVLNEAGVILSCGASLHWDDGRVAT 240 (362)
Q Consensus 211 ~a~~~~~~~~~~~~d~~~~~~~~~~G~~~~ 240 (362)
.....+ .+..+.+++|.||.+..
T Consensus 225 ~vvvHp-------qSiIHsmVef~DGsv~A 247 (376)
T 3a06_A 225 EVKIHR-------EGLVHGAVVLPDGNVKM 247 (376)
T ss_dssp EEEECT-------TCCEEEEEECTTSCEEE
T ss_pred EEEECC-------CCeEEEEEEEcCCcEEE
Confidence 887431 36789999999998744
No 61
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.69 E-value=3.3e-17 Score=144.34 Aligned_cols=110 Identities=14% Similarity=0.215 Sum_probs=97.1
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
|||||||+|.||+.++..+. .+++++++++|+++ +++ ..++|++++++ .++|+|++++|+..|.+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~-~~~------------~~~~~~~~l~~-~~~DvVv~~~~~~~~~~ 65 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRG-EHE------------KMVRGIDEFLQ-REMDVAVEAASQQAVKD 65 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSC-CCT------------TEESSHHHHTT-SCCSEEEECSCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCc-chh------------hhcCCHHHHhc-CCCCEEEECCCHHHHHH
Confidence 58999999999999999988 47899999999874 221 16889999996 57999999999999999
Q ss_pred HHHHHHHcCCeEEEeCCCCCCHHHH-HHHHHHHHHcCCEEEEeeec
Q 018020 89 WAISVAQKKKHLLMEKPMALNVAEF-DVILNACEENGVQLMDGTMW 133 (362)
Q Consensus 89 ~~~~al~~gk~V~~EKP~~~~~~~~-~~l~~~a~~~~~~~~v~~~~ 133 (362)
++..++++|+||+||||++.+.+++ ++|.+.++++|+.+++..+.
T Consensus 66 ~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~ 111 (236)
T 2dc1_A 66 YAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGA 111 (236)
T ss_dssp HHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTT
T ss_pred HHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCcc
Confidence 9999999999999999999998888 99999999999987766554
No 62
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.69 E-value=2.4e-17 Score=152.26 Aligned_cols=147 Identities=15% Similarity=0.161 Sum_probs=110.7
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCC--------------CCcccCCHHHHhcCCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPP--------------DAKVYGSYEALLDDKD 73 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~--------------~~~~~~~~~e~l~~~~ 73 (362)
++||||||+|.+|+.+++.+.++|+++|++++|++++++..+++.+|++. +..++.|+++++. +
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~--~ 79 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE--K 79 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT--T
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc--C
Confidence 48999999999999999999999999999999998888888888776420 1246789999996 6
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCH------HHHHHHHHHHHHcCCEEEEeeecc-cChhHHHHHHhh
Q 018020 74 IDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNV------AEFDVILNACEENGVQLMDGTMWV-HNPRTAQMKEFV 146 (362)
Q Consensus 74 ~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~------~~~~~l~~~a~~~~~~~~v~~~~r-~~p~~~~~k~~i 146 (362)
+|+|++|||+..|.+.+..++++||||+||||...+. -+.. .+.+++.++....++... +.|.++.+++.|
T Consensus 80 vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~sap~~~d~~~~~~v~~vn--~~~~~~~~ii~~~~C~t~~l~P~~~~l~~~I 157 (334)
T 2czc_A 80 VDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKADVAEVSFVAQAN--YEAALGKNYVRVVSCNTTGLVRTLSAIREYA 157 (334)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCGGGSSEEECHHHH--GGGGTTCSEEEECCHHHHHHHHHHHHHGGGE
T ss_pred CCEEEECCCccccHHHHHHHHHcCCceEeecccccccccceEEeccC--HHHHhhCCcEEecCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999974210 0111 011222344444444433 568888888887
Q ss_pred cCCCCccceEEEE
Q 018020 147 SDPQRFGQLRTMH 159 (362)
Q Consensus 147 ~~~g~iG~i~~i~ 159 (362)
++|.+|.+..+.
T Consensus 158 -~~g~i~ti~a~s 169 (334)
T 2czc_A 158 -DYVYAVMIRRAA 169 (334)
T ss_dssp -EEEEEEEEEESS
T ss_pred -ccccEEEEEEec
Confidence 666665554433
No 63
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=99.60 E-value=3.1e-16 Score=140.38 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=117.3
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHH--HHHHHHHcCCC-CCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEK--ATNFAKANNFP-PDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~--~~~~~~~~~~~-~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
++|||+|+|+ |.||+.++..+...++++|++++|+++++ .+.+.+..++. .++.+++|++++++ ++|+|+.+|+
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~DvVIDft~ 81 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFDVFIDFTR 81 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCSEEEECSC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CCCEEEEcCC
Confidence 5799999998 99999999999889999999999987643 11121222221 23456889999986 5999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCcc---ceEEEE
Q 018020 83 TSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFG---QLRTMH 159 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG---~i~~i~ 159 (362)
|..|.+.+..|+++|+||+|+|| +.+.++.++|.+++++.++.+..++....+..++.+++.. ..++ +|..++
T Consensus 82 p~~~~~~~~~a~~~G~~vVigTt-G~~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa---~~~~~~~dieiiE 157 (273)
T 1dih_A 82 PEGTLNHLAFCRQHGKGMVIGTT-GFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAA---KVMGDYTDIEIIE 157 (273)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCC-CCCHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHH---HHHTTTSEEEEEE
T ss_pred hHHHHHHHHHHHhCCCCEEEECC-CCCHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHH---HhcCCCCCEEEEE
Confidence 99999999999999999999999 7899999999999988887777776776666666555554 2333 677777
Q ss_pred EEe
Q 018020 160 SCF 162 (362)
Q Consensus 160 ~~~ 162 (362)
.+.
T Consensus 158 ~Hh 160 (273)
T 1dih_A 158 AHH 160 (273)
T ss_dssp EEC
T ss_pred eec
Confidence 653
No 64
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=99.52 E-value=4.3e-15 Score=134.11 Aligned_cols=118 Identities=9% Similarity=0.067 Sum_probs=99.4
Q ss_pred CceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
.+++||+|+|+ |.+|+.|++.+++. ++++++.+++.... + +.+|+ .+|.|++++++++++|+|+|++|+.
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g-~---~~~G~----~vy~sl~el~~~~~~D~viI~tP~~ 75 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGG-T---THLGL----PVFNTVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTT-C---EETTE----EEESSHHHHHHHHCCCEEEECCCGG
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCccc-c---eeCCe----eccCCHHHHhhcCCCCEEEEecCHH
Confidence 46799999998 99999999999876 68888888875210 1 13454 5899999999855699999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeec
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMW 133 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 133 (362)
.|.+++.+|+++|+|++++.+-+.+.++.++|.+.|+++|+.+ ++.|.
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~l-iGPNc 123 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRM-IGPNT 123 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEE-ECSSC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEE-EecCC
Confidence 9999999999999999999888889999999999999999976 44443
No 65
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.46 E-value=4.8e-14 Score=125.62 Aligned_cols=149 Identities=11% Similarity=0.118 Sum_probs=108.7
Q ss_pred CceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHH--HHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 6 QAAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEK--ATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 6 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
|++|||+|+| +|.||+.+++.+.+.|+++|++++|++... .+.+.+-.|+.+++.+++|++++++. +|+|+.+|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~--~DVVIDfT~ 82 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE--ADYLIDFTL 82 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH--CSEEEECSC
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC--CCEEEEcCC
Confidence 3479999999 899999999999999999999999987432 11122223444466789999999984 999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcC-CCCcc---ceEEE
Q 018020 83 TSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSD-PQRFG---QLRTM 158 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~-~g~iG---~i~~i 158 (362)
+..+.+.+..|+++|+||++-.. ..+.++.++|.++|++.++.+..| |+..+..+.++++. ...++ +|..+
T Consensus 83 p~a~~~~~~~al~~G~~vVigTT-G~s~~~~~~L~~aa~~~~vv~a~N----~s~Gv~l~~~~~~~aa~~l~~~~diei~ 157 (272)
T 4f3y_A 83 PEGTLVHLDAALRHDVKLVIGTT-GFSEPQKAQLRAAGEKIALVFSAN----MSVGVNVTMKLLEFAAKQFAQGYDIEII 157 (272)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCC-CCCHHHHHHHHHHTTTSEEEECSC----CCHHHHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECC-CCCHHHHHHHHHHhccCCEEEECC----CCHHHHHHHHHHHHHHHhcCcCCCEEEE
Confidence 99999999999999999999765 578888999999998755433333 34444333333210 12334 56666
Q ss_pred EEE
Q 018020 159 HSC 161 (362)
Q Consensus 159 ~~~ 161 (362)
+.+
T Consensus 158 E~H 160 (272)
T 4f3y_A 158 EAH 160 (272)
T ss_dssp EEE
T ss_pred Eec
Confidence 665
No 66
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=99.41 E-value=3.2e-14 Score=121.98 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=84.6
Q ss_pred ceeEEEEEeccHHHHHHHHHH-hcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAI-TLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~-~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
+..||+|||+|.+|..++..+ ... +++++|++|.++++...... |++ +..++++++++++ ++|+|+|++|+..
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~--gv~--V~~~~dl~ell~~-~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVR--GGV--IEHVDLLPQRVPG-RIEIALLTVPREA 152 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEET--TEE--EEEGGGHHHHSTT-TCCEEEECSCHHH
T ss_pred CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhc--CCe--eecHHhHHHHHHc-CCCEEEEeCCchh
Confidence 468999999999999999863 344 89999999999876654333 222 2347899999998 9999999999999
Q ss_pred cHHHHHHHHHcCCe-EEEeCCCCCCHHHH
Q 018020 86 HVKWAISVAQKKKH-LLMEKPMALNVAEF 113 (362)
Q Consensus 86 h~~~~~~al~~gk~-V~~EKP~~~~~~~~ 113 (362)
|.+++..++++|++ |++|||+..+++++
T Consensus 153 ~~ei~~~l~~aGi~~Ilnf~P~~l~vp~~ 181 (211)
T 2dt5_A 153 AQKAADLLVAAGIKGILNFAPVVLEVPKE 181 (211)
T ss_dssp HHHHHHHHHHHTCCEEEECSSSCCCCCTT
T ss_pred HHHHHHHHHHcCCCEEEECCcccccCCCC
Confidence 99999999999976 88999999988753
No 67
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=99.40 E-value=5e-13 Score=119.40 Aligned_cols=150 Identities=13% Similarity=0.121 Sum_probs=107.1
Q ss_pred CCceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHH--HHHHHHHcCC-CCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 5 SQAAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEK--ATNFAKANNF-PPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 5 ~~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~--~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
|++++||+|+| +|.||+.+++.+.+.|+++|++++|++... .+.+.+..|+ +.++.+++|++++++ ++|+|+.+
T Consensus 18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~--~aDVvIDF 95 (288)
T 3ijp_A 18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS--NTEGILDF 95 (288)
T ss_dssp ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT--SCSEEEEC
T ss_pred ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc--CCCEEEEc
Confidence 34689999999 899999999999999999999999986421 1111122222 235678999999997 59999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcC-CCCcc---ceE
Q 018020 81 LPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSD-PQRFG---QLR 156 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~-~g~iG---~i~ 156 (362)
|++..+.+.+..|+++|+++++-.. +.+.++..+|.++|++.++.+..| |+..+..+.++++. ...++ +|.
T Consensus 96 T~p~a~~~~~~~~l~~Gv~vViGTT-G~~~e~~~~L~~aa~~~~~~~a~N----~SiGv~ll~~l~~~aa~~l~~~~die 170 (288)
T 3ijp_A 96 SQPQASVLYANYAAQKSLIHIIGTT-GFSKTEEAQIADFAKYTTIVKSGN----MSLGVNLLANLVKRAAKALDDDFDIE 170 (288)
T ss_dssp SCHHHHHHHHHHHHHHTCEEEECCC-CCCHHHHHHHHHHHTTSEEEECSC----CCHHHHHHHHHHHHHHHHSCTTSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECC-CCCHHHHHHHHHHhCcCCEEEECC----CcHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 9999999999999999999998765 467888889999998744433322 34444443333310 12344 566
Q ss_pred EEEEE
Q 018020 157 TMHSC 161 (362)
Q Consensus 157 ~i~~~ 161 (362)
.++.+
T Consensus 171 IiE~H 175 (288)
T 3ijp_A 171 IYEMH 175 (288)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 66664
No 68
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=99.39 E-value=2.7e-13 Score=130.02 Aligned_cols=149 Identities=17% Similarity=0.196 Sum_probs=114.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CCC---CCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FPP---DAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~~---~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
..+|+|+|+|.+|+.++..+.+. +.+ +.++|++++++++++++++ +.. ++.-.++++++++ ++|+|+.++|.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~-G~~-V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a~~ 78 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS-GIK-VTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIPY 78 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT-TCE-EEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-cCE-EEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc--CCcEEEECCcc
Confidence 46899999999999999999865 677 5588999998888776653 100 0111124446666 59999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCC-Cc-cceEEEEEE
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQ-RF-GQLRTMHSC 161 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g-~i-G~i~~i~~~ 161 (362)
..|.++...++++|+||+++ +.......++.+.|+++|+.++.++..+..+....+++++ +++ .. |++..+...
T Consensus 79 ~~~~~i~~a~l~~g~~vvd~---~~~~~~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li-~q~~~~gg~i~~~~~~ 154 (450)
T 1ff9_A 79 TFHATVIKSAIRQKKHVVTT---SYVSPAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTI-EEVHAAGGKIKTFLSY 154 (450)
T ss_dssp -CHHHHHHHHHHHTCEEEES---SCCCHHHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHH-HHHHHTTCEEEEEEEE
T ss_pred ccchHHHHHHHhCCCeEEEe---ecccHHHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHH-HHhcccCCeeeEEEEE
Confidence 99999999999999999997 4556678999999999999999999998888889999998 544 23 566666665
Q ss_pred eee
Q 018020 162 FSF 164 (362)
Q Consensus 162 ~~~ 164 (362)
...
T Consensus 155 ~G~ 157 (450)
T 1ff9_A 155 CGG 157 (450)
T ss_dssp EEE
T ss_pred Ecc
Confidence 443
No 69
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.32 E-value=1.1e-12 Score=114.77 Aligned_cols=102 Identities=8% Similarity=0.074 Sum_probs=85.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+|||+|+|+|.||+.++..+.+.++ +|++++|++.+. ..|+ .+++|+++++ ++|+|+-+|.+....
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~------~~gv----~v~~dl~~l~---~~DVvIDft~p~a~~ 68 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKA------TTPY----QQYQHIADVK---GADVAIDFSNPNLLF 68 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC--------CCS----CBCSCTTTCT---TCSEEEECSCHHHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCccc------cCCC----ceeCCHHHHh---CCCEEEEeCChHHHH
Confidence 6999999999999999999999989 999999987652 3554 5899999987 599999777777666
Q ss_pred HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE
Q 018020 88 KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ 126 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~ 126 (362)
+.+. +++|+|+++.++ +.+.++.++|.++|++.++.
T Consensus 69 ~~~~--l~~g~~vVigTT-G~s~e~~~~l~~aa~~~~v~ 104 (243)
T 3qy9_A 69 PLLD--EDFHLPLVVATT-GEKEKLLNKLDELSQNMPVF 104 (243)
T ss_dssp HHHT--SCCCCCEEECCC-SSHHHHHHHHHHHTTTSEEE
T ss_pred HHHH--HhcCCceEeCCC-CCCHHHHHHHHHHHhcCCEE
Confidence 6665 999999999887 57888999999999885543
No 70
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=99.32 E-value=2e-12 Score=120.61 Aligned_cols=143 Identities=13% Similarity=0.155 Sum_probs=111.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
...||+|||+|.+|+.++..+.+. .+ +.|+||+++++++++++++ +.-++.-.+++++++++ +|+|++++|+..
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~-V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~--~DvVIn~~P~~~ 89 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FD-VYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKE--FELVIGALPGFL 89 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SE-EEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTT--CSCEEECCCHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--Ce-EEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhC--CCEEEECCChhh
Confidence 367999999999999999998766 56 5699999999999887654 11011123566777774 999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHH--HHHhhcCCCCccceEEEEEEee
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQ--MKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~--~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
|.+++..|+++|+|++. ++.+.++.+++.+.|+++|+.++.+. .+.|.+.. +..++ ..++ +..+.+.+.
T Consensus 90 ~~~v~~a~l~~G~~~vD---~s~~~~~~~~l~~~Ak~aG~~~l~g~--G~dPG~~~~~a~~~~---~~~~-v~~i~~~~G 160 (365)
T 2z2v_A 90 GFKSIKAAIKSKVDMVD---VSFMPENPLELRDEAEKAQVTIVFDA--GFAPGLSNILMGRIF---QELD-LKEGYIYVG 160 (365)
T ss_dssp HHHHHHHHHHTTCCEEE---CCCCSSCGGGGHHHHHHTTCEEECSC--BTTTBHHHHHHHHHH---HHSC-EEEEEEEEE
T ss_pred hHHHHHHHHHhCCeEEE---ccCCcHHHHHHHHHHHHcCCEEEECC--CCcchHHHHHHHHHH---HhcC-CCEEEEEec
Confidence 99999999999999886 56666778899999999999998665 57888853 33444 3466 888887654
No 71
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=99.26 E-value=6.1e-13 Score=114.23 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=78.5
Q ss_pred ceeEEEEEeccHHHHHHHHH-HhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRA-ITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~-~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
++.||+|||+|.+|..++.. ....++++++|++|.++++...... |++ +..++++++++++. |+|+|++|...
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~--gv~--V~~~~dl~eli~~~--D~ViIAvPs~~ 157 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVG--GVP--VYNLDDLEQHVKDE--SVAILTVPAVA 157 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEET--TEE--EEEGGGHHHHCSSC--CEEEECSCHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhc--CCe--eechhhHHHHHHhC--CEEEEecCchh
Confidence 46899999999999999985 3345689999999999886654333 222 23478899999874 99999999999
Q ss_pred cHHHHHHHHHcCCe-EEEeCCCCCCHHHH
Q 018020 86 HVKWAISVAQKKKH-LLMEKPMALNVAEF 113 (362)
Q Consensus 86 h~~~~~~al~~gk~-V~~EKP~~~~~~~~ 113 (362)
|.+++..++++|++ |+++||+..++.++
T Consensus 158 ~~ei~~~l~~aGi~~Ilnf~P~~l~vp~~ 186 (215)
T 2vt3_A 158 AQSITDRLVALGIKGILNFTPARLNVPEH 186 (215)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCCCCCCTT
T ss_pred HHHHHHHHHHcCCCEEEEcCceeccCCCc
Confidence 99999999999987 99999999998764
No 72
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=99.26 E-value=1.5e-10 Score=101.47 Aligned_cols=130 Identities=13% Similarity=0.174 Sum_probs=101.8
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
|||+|+|+ |.||+.++..+...|+++|++++|++ +|+++++. .++|+|+-+|++..+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~--------------------~dl~~~~~-~~~DvvIDfT~p~a~~ 59 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG--------------------DPLSLLTD-GNTEVVIDFTHPDVVM 59 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT--------------------CCTHHHHH-TTCCEEEECSCTTTHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC--------------------CCHHHHhc-cCCcEEEEccChHHHH
Confidence 58999997 99999999999888899999999864 36777776 3699999999999999
Q ss_pred HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCEEEEeeecccChhHHHHHHhhcC-CCCccceEEEEEEe
Q 018020 88 KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEEN-GVQLMDGTMWVHNPRTAQMKEFVSD-PQRFGQLRTMHSCF 162 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~-~~~~~v~~~~r~~p~~~~~k~~i~~-~g~iG~i~~i~~~~ 162 (362)
+.+..|+++|+|+++.++ +.+.++..+|.++|+++ ++.++...|+ +..+..+.++++. ...+.+|..++.+.
T Consensus 60 ~~~~~a~~~g~~~VigTT-G~~~e~~~~l~~aa~~~~~~~vv~a~N~--siGv~ll~~l~~~aa~~~~dieIiE~HH 133 (245)
T 1p9l_A 60 GNLEFLIDNGIHAVVGTT-GFTAERFQQVESWLVAKPNTSVLIAPNF--AIGAVLSMHFAKQAARFFDSAEVIELHH 133 (245)
T ss_dssp HHHHHHHHTTCEEEECCC-CCCHHHHHHHHHHHHTSTTCEEEECSCC--CHHHHHHHHHHHHHGGGCSEEEEEEEEC
T ss_pred HHHHHHHHcCCCEEEcCC-CCCHHHHHHHHHHHHhCCCCCEEEECCc--cHHHHHHHHHHHHHHhhcCCEEEEECcc
Confidence 999999999999999999 68889999999999977 8877766554 3333333333311 12344777777653
No 73
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=99.24 E-value=3.1e-11 Score=114.31 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=114.3
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcC------CC---CCCcccCCHHHHhcCCCCcEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANN------FP---PDAKVYGSYEALLDDKDIDAVY 78 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~------~~---~~~~~~~~~~e~l~~~~~D~V~ 78 (362)
+||+|||+|.+|..++..+.+.+++ ..+.++|++.+++++++++++ +. -++.-.++++++++..++|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 5899999999999999999988765 456689999999999888763 11 0111134566777765699999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEE----EeCCCC--CCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCc
Q 018020 79 LPLPTSMHVKWAISVAQKKKHLL----MEKPMA--LNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 79 i~~~~~~h~~~~~~al~~gk~V~----~EKP~~--~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~i 152 (362)
.++++..|.+++..|+++|+|++ +++|.. .......++.+.++++|+.++.+.. +.|.+..+......+..+
T Consensus 82 n~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G--~~PG~~~l~a~~~~~~~~ 159 (405)
T 4ina_A 82 NIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSG--FDPGVTNVFCAYAQKHYF 159 (405)
T ss_dssp ECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCB--TTTBHHHHHHHHHHHHTC
T ss_pred ECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCC--CCccHHHHHHHHHHHhcc
Confidence 99999999999999999999998 566522 2356667899999999999998876 677776544332011247
Q ss_pred cceEEEEEEe
Q 018020 153 GQLRTMHSCF 162 (362)
Q Consensus 153 G~i~~i~~~~ 162 (362)
++|..+.+..
T Consensus 160 ~~i~~i~i~~ 169 (405)
T 4ina_A 160 DEIHEIDILD 169 (405)
T ss_dssp SEEEEEEEEE
T ss_pred CcccEEEEEE
Confidence 8888888744
No 74
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.21 E-value=3.8e-11 Score=106.88 Aligned_cols=100 Identities=18% Similarity=0.318 Sum_probs=82.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+|||+|||+|.||..++..+.+.+ .+ +.++|+++++++.+++++|+ ..++|+++++++ +|+|++++|+..|.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~--~D~Vi~~v~~~~~~ 74 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP-HE-LIISGSSLERSKEIAEQLAL----PYAMSHQDLIDQ--VDLVILGIKPQLFE 74 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS-CE-EEEECSSHHHHHHHHHHHTC----CBCSSHHHHHHT--CSEEEECSCGGGHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECCCHHHHHHHHHHcCC----EeeCCHHHHHhc--CCEEEEEeCcHhHH
Confidence 579999999999999999998764 44 57999999999999888886 468899999874 99999999987777
Q ss_pred HHHHHHHHcCCeEEEeCCCCCCHHHHHHHH
Q 018020 88 KWAISVAQKKKHLLMEKPMALNVAEFDVIL 117 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~~~~~~~~l~ 117 (362)
+++.. ++.|+ +++++|.+.+.++.+++.
T Consensus 75 ~v~~~-l~~~~-~vv~~~~~~~~~~l~~~~ 102 (259)
T 2ahr_A 75 TVLKP-LHFKQ-PIISMAAGISLQRLATFV 102 (259)
T ss_dssp HHHTT-SCCCS-CEEECCTTCCHHHHHHHH
T ss_pred HHHHH-hccCC-EEEEeCCCCCHHHHHHhc
Confidence 76654 45665 899999999987655554
No 75
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.14 E-value=1.3e-10 Score=107.03 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=78.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC--------------CCCcccCCHHHHhcCCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP--------------PDAKVYGSYEALLDDKD 73 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~--------------~~~~~~~~~~e~l~~~~ 73 (362)
++||||+|+|.+|+.+++.+.++|++++++++|+++......+.+.+.. .+..+..+.++++. +
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~--~ 78 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD--E 78 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH--T
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc--C
Confidence 4799999999999999999999999999999998866655555543210 01122246777775 5
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCC
Q 018020 74 IDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPM 106 (362)
Q Consensus 74 ~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~ 106 (362)
+|+|+.|||+..|.+++..++++|++|++++|-
T Consensus 79 vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred CCEEEECCCchhhHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999999999999999996
No 76
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.10 E-value=8.9e-10 Score=105.81 Aligned_cols=150 Identities=17% Similarity=0.216 Sum_probs=107.9
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCC---CCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPP---DAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+..||+|+|+|.+|+.++..|.+.++++ +.+++|+++++++++++.++.. ++.-.+++.++++ ++|+|+.++|.
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~-V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~tp~ 98 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDIN-VTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA--DNDVVISLIPY 98 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEE-EEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH--TSSEEEECSCG
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc--CCCEEEECCch
Confidence 3568999999999999999998887787 5588999999998877644310 0000124445565 59999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhH--HHHHHhhcCCC-Cc-cceEEEE
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRT--AQMKEFVSDPQ-RF-GQLRTMH 159 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~--~~~k~~i~~~g-~i-G~i~~i~ 159 (362)
..|..++..|+++|+|++. .+.......++.+.|+++|+.++.+... .|.+ ..+++++ ++. .+ |++..+.
T Consensus 99 ~~~~~v~~a~l~~g~~vvd---~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~--~PG~~~~~a~~li-~q~~~~g~~~~s~~ 172 (467)
T 2axq_A 99 TFHPNVVKSAIRTKTDVVT---SSYISPALRELEPEIVKAGITVMNEIGL--DPGIDHLYAVKTI-DEVHRAGGKLKSFL 172 (467)
T ss_dssp GGHHHHHHHHHHHTCEEEE---CSCCCHHHHHHHHHHHHHTCEEECSCBB--TTBHHHHHHHHHH-HHHHHTTCEEEEEE
T ss_pred hhhHHHHHHHHhcCCEEEE---eecCCHHHHHHHHHHHHcCCEEEecCCc--CccchHHHHHHHH-HHHHhccCcceEEE
Confidence 9899999999999999997 3444456789999999999998877655 4443 3445555 222 22 5677776
Q ss_pred EEeeec
Q 018020 160 SCFSFA 165 (362)
Q Consensus 160 ~~~~~~ 165 (362)
.+....
T Consensus 173 ~wtG~~ 178 (467)
T 2axq_A 173 SYCGGL 178 (467)
T ss_dssp EEEEEE
T ss_pred EEeccc
Confidence 655443
No 77
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=99.09 E-value=2.8e-10 Score=104.55 Aligned_cols=98 Identities=14% Similarity=0.148 Sum_probs=78.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHH---cCCCCC---------------Cccc--CCH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKA---NNFPPD---------------AKVY--GSY 65 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~---~~~~~~---------------~~~~--~~~ 65 (362)
++||||+|+|.+|+.+++.+.++|+++|++|.|+ +.+.+..+.+- ++.-++ ..++ .|+
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 5899999999999999999988999999999996 77776665541 110000 0112 366
Q ss_pred HHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCC
Q 018020 66 EAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKP 105 (362)
Q Consensus 66 ~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP 105 (362)
+++ +.+.++|+|+.|||...|.+.+..++++| |.|++++|
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred HHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccC
Confidence 776 44457999999999999999999999999 99999999
No 78
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=99.07 E-value=4.3e-11 Score=111.96 Aligned_cols=143 Identities=13% Similarity=0.155 Sum_probs=101.0
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
++|||+|||+|.+|+..+..|.+. .++. ++|++.++++++.+... +.-++.-.+++.++++ +.|+|+.++|+..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~-~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~p~~~ 89 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVY-IGDVNNENLEKVKEFATPLKVDASNFDKLVEVMK--EFELVIGALPGFL 89 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEE-EEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHT--TCSEEEECCCGGG
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeE-EEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHh--CCCEEEEecCCcc
Confidence 478999999999999998888654 4443 78899888877644321 0001111223444555 5999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHH--HHHHhhcCCCCccceEEEEEEee
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTA--QMKEFVSDPQRFGQLRTMHSCFS 163 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~--~~k~~i~~~g~iG~i~~i~~~~~ 163 (362)
|..+++.|+++|+|++- ++.+.++.++|.+.|+++|+.++.++ -+.|.+. .++.++ + .+ ++..+..++.
T Consensus 90 ~~~v~~~~~~~g~~yvD---~s~~~~~~~~l~~~a~~~g~~~i~~~--G~~PG~~~~~a~~~~-~--~~-~~~~~~~~~g 160 (365)
T 3abi_A 90 GFKSIKAAIKSKVDMVD---VSFMPENPLELRDEAEKAQVTIVFDA--GFAPGLSNILMGRIF-Q--EL-DLKEGYIYVG 160 (365)
T ss_dssp HHHHHHHHHHHTCEEEE---CCCCSSCGGGGHHHHHHTTCEEECCC--BTTTBHHHHHHHHHH-H--HS-CEEEEEEEEE
T ss_pred cchHHHHHHhcCcceEe---eeccchhhhhhhhhhccCCceeeecC--CCCCchHHHHHHHHH-H--hc-cccceeEEec
Confidence 99999999999999875 66677788899999999999988654 4677765 334444 2 22 3455555444
No 79
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=99.07 E-value=2.3e-10 Score=105.04 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=75.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHH---HHcCCCC-C----------------CcccC--
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFA---KANNFPP-D----------------AKVYG-- 63 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~---~~~~~~~-~----------------~~~~~-- 63 (362)
++||||+|+|.+|+.+++.+.++|+++|++|.|+ +.+.+..+. ..+|.-+ + ..++.
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred ceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 5899999999999999999999999999999995 555544432 2333111 0 01132
Q ss_pred CHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 64 SYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 64 ~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
|++++ +.+.++|+|+.|||...|.+.+..++++| |+|++++|.
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCC
Confidence 56665 22246999999999999999999999999 579999995
No 80
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=99.02 E-value=1.1e-09 Score=100.85 Aligned_cols=90 Identities=19% Similarity=0.289 Sum_probs=74.7
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC-----------------CHHHHhc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG-----------------SYEALLD 70 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~e~l~ 70 (362)
++||||+|+|.+|+.+++.+.++|+++|++++|++.+.....+.+.+++ .+. +.+++++
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~----~~~~~~~~~~~~~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIR----IYVPQQSIKKFEESGIPVAGTVEDLIK 76 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCC----EECCGGGHHHHHTTTCCCCCCHHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcc----eecCcCHHHHhcccccccccCHhHhhc
Confidence 3799999999999999999999999999999999877777777776653 332 3334443
Q ss_pred CCCCcEEEEcCCCcccHHHHHHHHHcCCeEEEe
Q 018020 71 DKDIDAVYLPLPTSMHVKWAISVAQKKKHLLME 103 (362)
Q Consensus 71 ~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~E 103 (362)
++|+|+.|||+..+.+.+..++++|..++.-
T Consensus 77 --~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~ 107 (340)
T 1b7g_O 77 --TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQ 107 (340)
T ss_dssp --HCSEEEECCSTTHHHHHHHHHHHTTCEEEEC
T ss_pred --CCCEEEECCCCchhHHHHHHHHHcCCeEEEe
Confidence 5999999999999999999999999776653
No 81
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=98.96 E-value=1.6e-09 Score=97.78 Aligned_cols=114 Identities=10% Similarity=0.148 Sum_probs=91.8
Q ss_pred CceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+.|++|+|+ |.+|+.+++.+.+. ++++++.+++... .+ +-+|+ .+|.|++++.+..++|++++++|+.
T Consensus 11 ~~~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~VnP~~~-g~---~i~G~----~vy~sl~el~~~~~~Dv~ii~vp~~ 81 (294)
T 2yv1_A 11 DENTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVTPGKG-GQ---NVHGV----PVFDTVKEAVKETDANASVIFVPAP 81 (294)
T ss_dssp CTTCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEECTTCT-TC---EETTE----EEESSHHHHHHHHCCCEEEECCCHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeCCCCC-Cc---eECCE----eeeCCHHHHhhcCCCCEEEEccCHH
Confidence 35688999998 99999999999886 7777766665421 01 11454 6899999999844599999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+.+.+.+|+++|++.++..+-..+.++.++|.+.|+++|+.+.
T Consensus 82 ~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 82 FAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999999999999955555556788899999999999999655
No 82
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.93 E-value=2.3e-09 Score=96.47 Aligned_cols=114 Identities=11% Similarity=0.145 Sum_probs=91.5
Q ss_pred CceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
.+.+||+|+|+ |.+|+.+++.+++. ++++++.+++... .+ +.+|+ .+|.|++++.+..++|++++++|+.
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~-g~---~i~G~----~vy~sl~el~~~~~~Dv~Ii~vp~~ 75 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKG-GM---EVLGV----PVYDTVKEAVAHHEVDASIIFVPAP 75 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT-TC---EETTE----EEESSHHHHHHHSCCSEEEECCCHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCC-Cc---eECCE----EeeCCHHHHhhcCCCCEEEEecCHH
Confidence 45789999998 99999999998876 7888877777531 00 12354 6999999998844699999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+.+.+.+|+++|.+.++.-.-..+.++.+++.+.++++++.+.
T Consensus 76 ~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 76 AAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 99999999999998833333346678889999999999998654
No 83
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.93 E-value=1.7e-09 Score=86.32 Aligned_cols=106 Identities=18% Similarity=0.214 Sum_probs=82.2
Q ss_pred CceeEEEEEec----cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 6 QAAIRFGIIGA----ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 6 ~~~~~v~iiG~----G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
.++.+|+|||+ |.+|..+++.+++. +++ +..++++.+ . -.| ..+|.|++|+.+. +|+|++++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~-V~~vnp~~~---~---i~G----~~~~~s~~el~~~--vDlvii~v 77 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSK-GFE-VLPVNPNYD---E---IEG----LKCYRSVRELPKD--VDVIVFVV 77 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHT-TCE-EEEECTTCS---E---ETT----EECBSSGGGSCTT--CCEEEECS
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHC-CCE-EEEeCCCCC---e---ECC----eeecCCHHHhCCC--CCEEEEEe
Confidence 35789999999 99999999999876 677 333444421 1 134 3689999999874 99999999
Q ss_pred CCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 82 PTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
|+..+.+++..++++|...++..+-+ .++++.+.++++|+.+.-
T Consensus 78 p~~~v~~v~~~~~~~g~~~i~~~~~~----~~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 78 PPKVGLQVAKEAVEAGFKKLWFQPGA----ESEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTS----CCHHHHHHHHHHTCEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcc----HHHHHHHHHHHCCCEEEc
Confidence 99999999999999996656555533 268999999999998763
No 84
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.86 E-value=4e-08 Score=75.72 Aligned_cols=109 Identities=18% Similarity=0.214 Sum_probs=83.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCC---CCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPP---DAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
+++|+|+|+|.+|...+..+.+.+..+++ ++|+++++.+.+. ..++.. +..-.++++++++ ++|+|+.++|..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~-~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~~~~~ 80 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVT-VADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALG--GFDAVISAAPFF 80 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEE-EEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTT--TCSEEEECSCGG
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEE-EEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHc--CCCEEEECCCch
Confidence 57899999999999999999887436754 7889998888765 333210 0011123444554 599999999999
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEEN 123 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~ 123 (362)
.+..++..++++|++++. ++.+.+..+++.++.++.
T Consensus 81 ~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~a 116 (118)
T 3ic5_A 81 LTPIIAKAAKAAGAHYFD---LTEDVAATNAVRALVEDS 116 (118)
T ss_dssp GHHHHHHHHHHTTCEEEC---CCSCHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHhCCCEEE---ecCcHHHHHHHHHHHHhh
Confidence 999999999999999885 788999999998887764
No 85
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=98.86 E-value=1.2e-08 Score=92.27 Aligned_cols=113 Identities=12% Similarity=0.166 Sum_probs=89.0
Q ss_pred CceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCC-CCcEEEEcCCC
Q 018020 6 QAAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDK-DIDAVYLPLPT 83 (362)
Q Consensus 6 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~-~~D~V~i~~~~ 83 (362)
..+.|++|+|+ |.+|+.+++.+++. ++++++.+++... .+ +-+|+ .+|.|++++.+.. ++|++++++|+
T Consensus 11 ~~~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~-g~---~i~G~----~vy~sl~el~~~~~~~DvaIi~vp~ 81 (297)
T 2yv2_A 11 DSETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKG-GS---EVHGV----PVYDSVKEALAEHPEINTSIVFVPA 81 (297)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT-TC---EETTE----EEESSHHHHHHHCTTCCEEEECCCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCC-Cc---eECCE----eeeCCHHHHhhcCCCCCEEEEecCH
Confidence 45789999998 89999999998876 7887777766421 01 11354 6999999998743 39999999999
Q ss_pred cccHHHHHHHHHcCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 84 SMHVKWAISVAQKKKH-LLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~-V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
..+.+.+.+|+++|++ +++- .-..+.++.++|.+.|+++++.+.
T Consensus 82 ~~~~~~v~ea~~~Gi~~vVi~-t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 82 PFAPDAVYEAVDAGIRLVVVI-TEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp GGHHHHHHHHHHTTCSEEEEC-CCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEE-CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999999999988 5542 224477889999999999998655
No 86
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.82 E-value=2.6e-08 Score=90.32 Aligned_cols=111 Identities=9% Similarity=0.179 Sum_probs=84.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
+++||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+.++ |+ ..++++++++++ +|+|++++|...|
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~----~~~~~~~~~~~~--~D~vi~~vp~~~~ 73 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKE-GVTVY-AFDLMEANVAAVVAQ-GA----QACENNQKVAAA--SDIIFTSLPNAGI 73 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHT-TCEEE-EECSSHHHHHHHHTT-TC----EECSSHHHHHHH--CSEEEECCSSHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-CCeEE-EEeCCHHHHHHHHHC-CC----eecCCHHHHHhC--CCEEEEECCCHHH
Confidence 368999999999999999998876 57765 899999988887654 43 578899999875 9999999999887
Q ss_pred HHHHHH-------HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 87 VKWAIS-------VAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 87 ~~~~~~-------al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+.+.. .++.|+.|+. .- +......++|.+.+.+.++.++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~-~~-~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVD-MS-SVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEE-CC-CCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEE-CC-CCCHHHHHHHHHHHHHcCCeEE
Confidence 665552 3445665554 22 3445677888888877777655
No 87
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.81 E-value=3.8e-08 Score=89.58 Aligned_cols=119 Identities=14% Similarity=0.158 Sum_probs=88.8
Q ss_pred CCccCC-ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEE
Q 018020 1 MATESQ-AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 1 m~~~~~-~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i 79 (362)
|+|..+ ..+||+|||+|.||..++..|.+. +++|+ ++|+++++++.+.+. |. ..++|++++++. .|+|++
T Consensus 1 m~m~~~~~~~~IgiIG~G~mG~~~A~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~----~~~~~~~e~~~~--aDvVi~ 71 (306)
T 3l6d_A 1 MSLSDESFEFDVSVIGLGAMGTIMAQVLLKQ-GKRVA-IWNRSPGKAAALVAA-GA----HLCESVKAALSA--SPATIF 71 (306)
T ss_dssp -CCCCCCCSCSEEEECCSHHHHHHHHHHHHT-TCCEE-EECSSHHHHHHHHHH-TC----EECSSHHHHHHH--SSEEEE
T ss_pred CCCCcccCCCeEEEECCCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHHC-CC----eecCCHHHHHhc--CCEEEE
Confidence 555433 357999999999999999999877 56755 789999999888765 43 578899999986 899999
Q ss_pred cCCCcccHHHHHH-----HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Q 018020 80 PLPTSMHVKWAIS-----VAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDG 130 (362)
Q Consensus 80 ~~~~~~h~~~~~~-----al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 130 (362)
++|+..+.+.+.. .+..|+ ++++. -+.++...+++.+.+++.|+.+..+
T Consensus 72 ~vp~~~~~~~v~~~~~l~~~~~g~-ivid~-st~~~~~~~~l~~~~~~~g~~~vda 125 (306)
T 3l6d_A 72 VLLDNHATHEVLGMPGVARALAHR-TIVDY-TTNAQDEGLALQGLVNQAGGHYVKG 125 (306)
T ss_dssp CCSSHHHHHHHHTSTTHHHHTTTC-EEEEC-CCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred EeCCHHHHHHHhcccchhhccCCC-EEEEC-CCCCHHHHHHHHHHHHHcCCeEEec
Confidence 9998876544332 334454 44543 2567788888888888888776544
No 88
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.79 E-value=5.1e-09 Score=84.32 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=80.7
Q ss_pred eeEEEEEec----cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGA----ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~----G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+.+|+|||+ |.+|..++..+++. +++ |+++++.. + +-.| ..+|.|++|+.+ .+|+|+|++|+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~-G~~---v~~Vnp~~-~---~i~G----~~~y~sl~~l~~--~vDlvvi~vp~ 87 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEH-GYD---VYPVNPKY-E---EVLG----RKCYPSVLDIPD--KIEVVDLFVKP 87 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCE---EEEECTTC-S---EETT----EECBSSGGGCSS--CCSEEEECSCH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHC-CCE---EEEECCCC-C---eECC----eeccCCHHHcCC--CCCEEEEEeCH
Confidence 678999999 68999999999876 677 34444432 1 1134 468999999976 49999999999
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
..+.+++.+|+++|...++-.+-.. .+++.+.++++|+.+.
T Consensus 88 ~~~~~vv~~~~~~gi~~i~~~~g~~----~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 88 KLTMEYVEQAIKKGAKVVWFQYNTY----NREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHHHHHTCSEEEECTTCC----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCch----HHHHHHHHHHcCCEEE
Confidence 9999999999999966555555333 6889999999999865
No 89
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.79 E-value=3.4e-08 Score=89.00 Aligned_cols=109 Identities=15% Similarity=0.182 Sum_probs=85.9
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
+||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+.+. |+ ..++|+++++++ .|+|++++|+..+.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~----~~~~~~~~~~~~--aDvvi~~vp~~~~~~ 72 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-GCSVT-IWNRSPEKAEELAAL-GA----ERAATPCEVVES--CPVTFAMLADPAAAE 72 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSGGGGHHHHHT-TC----EECSSHHHHHHH--CSEEEECCSSHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CCeEE-EEcCCHHHHHHHHHC-CC----eecCCHHHHHhc--CCEEEEEcCCHHHHH
Confidence 6899999999999999999877 57766 889999988887664 43 678999999986 899999999765554
Q ss_pred HHH-------HHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 89 WAI-------SVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 89 ~~~-------~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+. ..++.|+.|+ .. -+.++...+++.+.+++.|+.+.
T Consensus 73 ~v~~~~~~l~~~l~~~~~vi-~~-st~~~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pef_A 73 EVCFGKHGVLEGIGEGRGYV-DM-STVDPATSQRIGVAVVAKGGRFL 117 (287)
T ss_dssp HHHHSTTCHHHHCCTTCEEE-EC-SCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHcCcchHhhcCCCCCEEE-eC-CCCCHHHHHHHHHHHHHhCCEEE
Confidence 444 3445666554 44 46688999999999988887654
No 90
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.78 E-value=9.1e-08 Score=88.76 Aligned_cols=114 Identities=11% Similarity=0.155 Sum_probs=86.4
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~ 84 (362)
++++||+|||+|.||..++..|.+. +++|+ ++|+++++++.+.+. |+ ..++|++++++. ..+|+|++++|+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-G~~V~-v~dr~~~~~~~l~~~-g~----~~~~s~~e~~~~a~~~DvVi~~vp~~ 92 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-GHECV-VYDLNVNAVQALERE-GI----AGARSIEEFCAKLVKPRVVWLMVPAA 92 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHTT-TC----BCCSSHHHHHHHSCSSCEEEECSCGG
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-CCEEE-EEeCCHHHHHHHHHC-CC----EEeCCHHHHHhcCCCCCEEEEeCCHH
Confidence 4568999999999999999999887 57755 889999998887653 43 578899999875 3569999999999
Q ss_pred ccHHHHHHHHHcC---CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 85 MHVKWAISVAQKK---KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 85 ~h~~~~~~al~~g---k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+.+-+...+... ..++++. -+......+++.+.+++.|+.+.
T Consensus 93 -~v~~vl~~l~~~l~~g~iiId~-st~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 93 -VVDSMLQRMTPLLAANDIVIDG-GNSHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp -GHHHHHHHHGGGCCTTCEEEEC-SSCCHHHHHHHHHHHHTTTCEEE
T ss_pred -HHHHHHHHHHhhCCCCCEEEeC-CCCChHHHHHHHHHHHHCCCEEE
Confidence 555444444332 2466653 35678889999999988887654
No 91
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=98.78 E-value=6.9e-08 Score=87.42 Aligned_cols=110 Identities=20% Similarity=0.227 Sum_probs=89.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
.|||+||+|.||...+..|.+. +++|+ ++||++++++.+.+. | ....+|+.|+.+. .|+|+++.|+..+.+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~-G~~v~-v~dr~~~~~~~l~~~-G----a~~a~s~~e~~~~--~dvv~~~l~~~~~v~ 74 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA-GYLLN-VFDLVQSAVDGLVAA-G----ASAARSARDAVQG--ADVVISMLPASQHVE 74 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEE-EECSSHHHHHHHHHT-T----CEECSSHHHHHTT--CSEEEECCSCHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhC-CCeEE-EEcCCHHHHHHHHHc-C----CEEcCCHHHHHhc--CCceeecCCchHHHH
Confidence 4899999999999999999877 67765 899999999998774 3 3688999999986 999999999988777
Q ss_pred HHHHH-------HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 89 WAISV-------AQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 89 ~~~~a-------l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
-+... ++.| .++++-- +.+++.++++.+.++++|+.+..
T Consensus 75 ~V~~~~~g~~~~~~~g-~iiId~s-T~~p~~~~~~a~~~~~~G~~~lD 120 (300)
T 3obb_A 75 GLYLDDDGLLAHIAPG-TLVLECS-TIAPTSARKIHAAARERGLAMLD 120 (300)
T ss_dssp HHHHSSSSSTTSCCC--CEEEECS-CCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHhchhhhhhcCCCC-CEEEECC-CCCHHHHHHHHHHHHHcCCEEEe
Confidence 66542 2223 4677644 67899999999999999887654
No 92
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.77 E-value=6e-08 Score=88.85 Aligned_cols=112 Identities=16% Similarity=0.156 Sum_probs=86.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
..+||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+++. |+ ..++|+++++++ .|+|++++|+..+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-G~~V~-~~dr~~~~~~~l~~~-g~----~~~~~~~e~~~~--aDvVi~~vp~~~~ 100 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-GYALQ-VWNRTPARAASLAAL-GA----TIHEQARAAARD--ADIVVSMLENGAV 100 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHTT-TC----EEESSHHHHHTT--CSEEEECCSSHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-CCeEE-EEcCCHHHHHHHHHC-CC----EeeCCHHHHHhc--CCEEEEECCCHHH
Confidence 357999999999999999999877 67755 789999998888665 43 678999999986 8999999998766
Q ss_pred HHHHHH------HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 87 VKWAIS------VAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 87 ~~~~~~------al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
.+.+.. .++.|+. ++..- +.++...+++.+.+++.|+.+..
T Consensus 101 ~~~v~~~~~~~~~l~~~~~-vi~~s-t~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSL-FLDMA-SITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCE-EEECS-CCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcchhHHhhCCCCCE-EEecC-CCCHHHHHHHHHHHHHcCCEEEe
Confidence 555542 3344544 44432 56788899999999888876653
No 93
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.77 E-value=3.2e-09 Score=85.61 Aligned_cols=114 Identities=12% Similarity=0.104 Sum_probs=85.9
Q ss_pred eeEEEEEec----cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGA----ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~----G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+.+|+|||+ |.+|..++..+.+. +++ +..+++... .+. -.| ..+|.|++|+.+ ++|+|+|++|+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~-G~~-v~~vnp~~~-g~~---i~G----~~~~~sl~el~~--~~Dlvii~vp~ 80 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQ-GYH-VIPVSPKVA-GKT---LLG----QQGYATLADVPE--KVDMVDVFRNS 80 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHH-TCC-EEEECSSST-TSE---ETT----EECCSSTTTCSS--CCSEEECCSCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHC-CCE-EEEeCCccc-ccc---cCC----eeccCCHHHcCC--CCCEEEEEeCH
Confidence 668999999 78999999998776 566 334455430 011 134 368999999876 49999999999
Q ss_pred cccHHHHHHHHHcC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE-EeeecccChh
Q 018020 84 SMHVKWAISVAQKK-KHLLMEKPMALNVAEFDVILNACEENGVQLM-DGTMWVHNPR 138 (362)
Q Consensus 84 ~~h~~~~~~al~~g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~-v~~~~r~~p~ 138 (362)
..+.+++..++++| +.|+++. -+. .+++.+.++++|+.+. .++....+|.
T Consensus 81 ~~v~~v~~~~~~~g~~~i~i~~-~~~----~~~l~~~a~~~Gi~~igpnc~g~~~~~ 132 (145)
T 2duw_A 81 EAAWGVAQEAIAIGAKTLWLQL-GVI----NEQAAVLAREAGLSVVMDRCPAIELPR 132 (145)
T ss_dssp THHHHHHHHHHHHTCCEEECCT-TCC----CHHHHHHHHTTTCEEECSCCHHHHSTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcC-ChH----HHHHHHHHHHcCCEEEcCCeeeEEccc
Confidence 99999999999999 8899973 222 6889999999999876 4555555553
No 94
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.76 E-value=6.1e-08 Score=87.98 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=85.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
++||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+.+. |+ ..++|+++++++ .|+|++++|...+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~-G~~V~-~~d~~~~~~~~~~~~-g~----~~~~~~~~~~~~--aDvvi~~vp~~~~~ 73 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA-GYLLN-VFDLVQSAVDGLVAA-GA----SAARSARDAVQG--ADVVISMLPASQHV 73 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT-TCEEE-EECSSHHHHHHHHHT-TC----EECSSHHHHHTT--CSEEEECCSCHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC-CCeEE-EEcCCHHHHHHHHHC-CC----eEcCCHHHHHhC--CCeEEEECCCHHHH
Confidence 57999999999999999999877 57755 789999999888764 43 578999999986 89999999988776
Q ss_pred HHHHH-------HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 88 KWAIS-------VAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 88 ~~~~~-------al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+.+.. .++.|+. ++.. -+......+++.+..++.|+.+.
T Consensus 74 ~~v~~~~~~~~~~l~~~~~-vi~~-st~~~~~~~~l~~~~~~~g~~~~ 119 (302)
T 2h78_A 74 EGLYLDDDGLLAHIAPGTL-VLEC-STIAPTSARKIHAAARERGLAML 119 (302)
T ss_dssp HHHHHSSSCGGGSSCSSCE-EEEC-SCCCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHcCchhHHhcCCCCcE-EEEC-CCCCHHHHHHHHHHHHHcCCEEE
Confidence 65554 2334444 4443 25677888889888888877654
No 95
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=98.76 E-value=1.2e-08 Score=93.85 Aligned_cols=97 Identities=13% Similarity=0.187 Sum_probs=74.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC----------------CCCcccCCHHHHhcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP----------------PDAKVYGSYEALLDD 71 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~----------------~~~~~~~~~~e~l~~ 71 (362)
++||||+|+|.+|+.+++.+..+|+++|++++|.+++....+.+..|.. ....+-.+.++++.
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~- 80 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE- 80 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG-
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc-
Confidence 4899999999999999999988899999999998766655554432211 00011223344443
Q ss_pred CCCcEEEEcCCCcccHHHHH-HHHHcCCeEEEeCCC
Q 018020 72 KDIDAVYLPLPTSMHVKWAI-SVAQKKKHLLMEKPM 106 (362)
Q Consensus 72 ~~~D~V~i~~~~~~h~~~~~-~al~~gk~V~~EKP~ 106 (362)
++|+|+.|||...|.+.+. .++++|++|++.+|.
T Consensus 81 -~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 81 -DADIVVDGAPKKIGKQNLENIYKPHKVKAILQGGE 115 (343)
T ss_dssp -GCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTTS
T ss_pred -CCCEEEECCCccccHHHHHHHHHHCCCEEEECCCc
Confidence 6999999999999999996 999999999999985
No 96
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=98.75 E-value=1.3e-08 Score=94.18 Aligned_cols=92 Identities=17% Similarity=0.328 Sum_probs=68.8
Q ss_pred ceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---------CCCcccC--CHHHHhcCCCC
Q 018020 7 AAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---------PDAKVYG--SYEALLDDKDI 74 (362)
Q Consensus 7 ~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---------~~~~~~~--~~~e~l~~~~~ 74 (362)
+++||+|+| +|.+|+.+++.+.++|.++|+++++.+....+.+.+.++.. .... +. +.++ ++ ++
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~-~~--~v 78 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLP-IVSTNYED-HK--DV 78 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCB-EECSSGGG-GT--TC
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeE-EeeCCHHH-hc--CC
Confidence 479999999 79999999999999999999999843333333444444310 0111 22 3333 33 69
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEE
Q 018020 75 DAVYLPLPTSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 75 D~V~i~~~~~~h~~~~~~al~~gk~V~~ 102 (362)
|+|+.|+|...|.+++..++++|++|+.
T Consensus 79 DvVf~atp~~~s~~~a~~~~~aG~~VId 106 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELVKNGKIVVS 106 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEECCChHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999999775
No 97
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.74 E-value=2e-08 Score=89.45 Aligned_cols=81 Identities=17% Similarity=0.172 Sum_probs=68.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+|||+|||+|.||..++..+.+. +++++.++|+++++++.+++++|+ ..+++++++++ ++|+|++++|+..+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~--~~Dvvi~av~~~~~~ 82 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTEESARELAQKVEA----EYTTDLAEVNP--YAKLYIVSLKDSAFA 82 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSHHHHHHHHHHTTC----EEESCGGGSCS--CCSEEEECCCHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCC----ceeCCHHHHhc--CCCEEEEecCHHHHH
Confidence 58999999999999999988766 577788999999999999888875 46889999887 499999999999887
Q ss_pred HHHHHHHH
Q 018020 88 KWAISVAQ 95 (362)
Q Consensus 88 ~~~~~al~ 95 (362)
+++....+
T Consensus 83 ~v~~~l~~ 90 (266)
T 3d1l_A 83 ELLQGIVE 90 (266)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77665443
No 98
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.73 E-value=8.6e-09 Score=94.43 Aligned_cols=99 Identities=15% Similarity=0.057 Sum_probs=79.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC---CCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN---FPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~---~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
...+++|||+|.+|..++..+....+.+.+.|+||+++++++++++++ +. +. ++|+++++ + .|+|+++||.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~--~~-~~~~~e~v-~--aDvVi~aTp~ 197 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGIS--AS-VQPAEEAS-R--CDVLVTTTPS 197 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCC--EE-ECCHHHHT-S--SSEEEECCCC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCce--EE-ECCHHHHh-C--CCEEEEeeCC
Confidence 357899999999999999998876567778899999999999998864 22 34 88999998 4 9999999998
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHH
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAE 112 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~ 112 (362)
..+. +-...++.|+||+++++...+..+
T Consensus 198 ~~pv-~~~~~l~~G~~V~~ig~~~p~~~e 225 (322)
T 1omo_A 198 RKPV-VKAEWVEEGTHINAIGADGPGKQE 225 (322)
T ss_dssp SSCC-BCGGGCCTTCEEEECSCCSTTCCC
T ss_pred CCce-ecHHHcCCCeEEEECCCCCCCccc
Confidence 6432 123678899999999776665433
No 99
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.73 E-value=8e-08 Score=86.27 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=65.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCc---EEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNA---VLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~---~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
++||+|||+|.||..++..+.+.. + + +.++|+++++++++++++|+ ..++|..+++++ .|+|++++|+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g-~~~~~-V~v~dr~~~~~~~l~~~~gi----~~~~~~~~~~~~--aDvVilav~p~ 74 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANG-YDPNR-ICVTNRSLDKLDFFKEKCGV----HTTQDNRQGALN--ADVVVLAVKPH 74 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTT-CCGGG-EEEECSSSHHHHHHHHTTCC----EEESCHHHHHSS--CSEEEECSCGG
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC-CCCCe-EEEEeCCHHHHHHHHHHcCC----EEeCChHHHHhc--CCeEEEEeCHH
Confidence 588999999999999999987763 3 4 45899999999999988886 578899999885 89999999987
Q ss_pred ccHHHHHHHH
Q 018020 85 MHVKWAISVA 94 (362)
Q Consensus 85 ~h~~~~~~al 94 (362)
...+++....
T Consensus 75 ~~~~vl~~l~ 84 (280)
T 3tri_A 75 QIKMVCEELK 84 (280)
T ss_dssp GHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7666665543
No 100
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.72 E-value=7.1e-08 Score=87.65 Aligned_cols=116 Identities=14% Similarity=0.155 Sum_probs=84.1
Q ss_pred CCccCCceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcc-cCCHHHHhcCCCCcEEEE
Q 018020 1 MATESQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKV-YGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~-~~~~~e~l~~~~~D~V~i 79 (362)
|+++. +++||+|||+|.||..++..|.+. +.+|+ ++|+++++++.+.+. |. .. .+|++++++. .|+|++
T Consensus 1 M~~~~-~~~~I~iIG~G~mG~~~a~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~----~~~~~~~~e~~~~--aDvvi~ 70 (303)
T 3g0o_A 1 MSLTG-TDFHVGIVGLGSMGMGAARSCLRA-GLSTW-GADLNPQACANLLAE-GA----CGAAASAREFAGV--VDALVI 70 (303)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHT-TC----SEEESSSTTTTTT--CSEEEE
T ss_pred CCCCC-CCCeEEEECCCHHHHHHHHHHHHC-CCeEE-EEECCHHHHHHHHHc-CC----ccccCCHHHHHhc--CCEEEE
Confidence 54332 368999999999999999999877 67755 789999998888764 43 34 7899998875 899999
Q ss_pred cCCCcccHHHHH-------HHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 80 PLPTSMHVKWAI-------SVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 80 ~~~~~~h~~~~~-------~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
++|+..+.+.+. ..++.|+ +++..- +..+...+++.+..++.|+.+.
T Consensus 71 ~vp~~~~~~~v~~~~~~l~~~l~~g~-ivv~~s-t~~~~~~~~~~~~~~~~g~~~~ 124 (303)
T 3g0o_A 71 LVVNAAQVRQVLFGEDGVAHLMKPGS-AVMVSS-TISSADAQEIAAALTALNLNML 124 (303)
T ss_dssp CCSSHHHHHHHHC--CCCGGGSCTTC-EEEECS-CCCHHHHHHHHHHHHTTTCEEE
T ss_pred ECCCHHHHHHHHhChhhHHhhCCCCC-EEEecC-CCCHHHHHHHHHHHHHcCCeEE
Confidence 999976655553 2334454 445432 4678888899888888887654
No 101
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.70 E-value=7.5e-08 Score=87.77 Aligned_cols=112 Identities=13% Similarity=0.141 Sum_probs=86.2
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
.+++||+|||+|.||..++..|.+. +.+|+ ++|+++++++.+.+ .|+ ..++|++++++. .|+|++++|...
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~-G~~V~-~~dr~~~~~~~l~~-~g~----~~~~~~~~~~~~--aDvvi~~vp~~~ 89 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKN-GFKVT-VWNRTLSKCDELVE-HGA----SVCESPAEVIKK--CKYTIAMLSDPC 89 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSGGGGHHHHH-TTC----EECSSHHHHHHH--CSEEEECCSSHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHC-CCeEE-EEeCCHHHHHHHHH-CCC----eEcCCHHHHHHh--CCEEEEEcCCHH
Confidence 3468999999999999999999877 56755 78999998888764 453 578999999985 899999999876
Q ss_pred cHHHHH---H----HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 86 HVKWAI---S----VAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 86 h~~~~~---~----al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+.+.+. . .++.|+ +++..- +.++...+++.+.+++.|+.+.
T Consensus 90 ~~~~v~~~~~~l~~~l~~g~-~vv~~s-t~~~~~~~~~~~~~~~~g~~~v 137 (310)
T 3doj_A 90 AALSVVFDKGGVLEQICEGK-GYIDMS-TVDAETSLKINEAITGKGGRFV 137 (310)
T ss_dssp HHHHHHHSTTCGGGGCCTTC-EEEECS-CCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCchhhhhccCCCC-EEEECC-CCCHHHHHHHHHHHHHcCCEEE
Confidence 655444 2 233444 555543 6678899999999888887654
No 102
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.70 E-value=4.6e-09 Score=97.13 Aligned_cols=118 Identities=8% Similarity=-0.060 Sum_probs=86.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCC--CcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPD--AKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
...+|+|||+|.+|..++..+....+.+-+.|+|+++++++++++++.-.++ +..++++++++.. .|+|+++||..
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~--aDiVi~aTps~ 205 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKG--VDIITTVTADK 205 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTT--CSEEEECCCCS
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhc--CCEEEEeccCC
Confidence 3568999999999999998876554566778999999999999998731111 3468899999975 89999999997
Q ss_pred ccHHHH-HHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Q 018020 85 MHVKWA-ISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDG 130 (362)
Q Consensus 85 ~h~~~~-~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 130 (362)
.|.+++ ...++.|+||.+.-....+ .+|+...+.+.+. +++.
T Consensus 206 ~~~pvl~~~~l~~G~~V~~vgs~~p~---~~El~~~~~~~a~-v~vD 248 (350)
T 1x7d_A 206 AYATIITPDMLEPGMHLNAVGGDCPG---KTELHADVLRNAR-VFVE 248 (350)
T ss_dssp SEEEEECGGGCCTTCEEEECSCCBTT---BEEECHHHHHTSE-EEES
T ss_pred CCCceecHHHcCCCCEEEECCCCCCC---ceeeCHHHHhcCc-EEEC
Confidence 554433 3678899999997554433 3444444545554 4444
No 103
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.69 E-value=5.9e-08 Score=87.78 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=83.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
|||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+.+. |+ ..++|++++++. .|+|++++|...+.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~----~~~~~~~~~~~~--~Dvvi~~vp~~~~~~ 71 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH-GYPLI-IYDVFPDACKEFQDA-GE----QVVSSPADVAEK--ADRIITMLPTSINAI 71 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT-TCCEE-EECSSTHHHHHHHTT-TC----EECSSHHHHHHH--CSEEEECCSSHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHHc-CC----eecCCHHHHHhc--CCEEEEeCCCHHHHH
Confidence 4799999999999999998776 56654 889999888877653 43 577899998875 899999999888766
Q ss_pred HHHHH-------HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Q 018020 89 WAISV-------AQKKKHLLMEKPMALNVAEFDVILNACEENGVQL 127 (362)
Q Consensus 89 ~~~~a-------l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~ 127 (362)
.+... ++.|+ +++. .-+.+.+..+++.+...+.++.+
T Consensus 72 ~v~~~~~~~~~~l~~~~-~vv~-~s~~~~~~~~~~~~~~~~~g~~~ 115 (296)
T 2gf2_A 72 EAYSGANGILKKVKKGS-LLID-SSTIDPAVSKELAKEVEKMGAVF 115 (296)
T ss_dssp HHHHSTTSGGGTCCTTC-EEEE-CSCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHhCchhHHhcCCCCC-EEEE-CCCCCHHHHHHHHHHHHHcCCEE
Confidence 65543 23454 6777 77888999999888877766543
No 104
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.69 E-value=7.8e-09 Score=94.36 Aligned_cols=113 Identities=13% Similarity=0.076 Sum_probs=85.0
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
..++|+|||+|.||..++..+.+..+++-+.++|++++++++++++++. .+..+++++++++. .|+|+++||.. +
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~--~~~~~~~~~e~v~~--aDiVi~atp~~-~ 208 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG--EVRVCSSVQEAVAG--ADVIITVTLAT-E 208 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS--CCEECSSHHHHHTT--CSEEEECCCCS-S
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC--CeEEeCCHHHHHhc--CCEEEEEeCCC-C
Confidence 3578999999999999999987664565577999999999999998762 12568899999985 89999999963 2
Q ss_pred HHHHH-HHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 87 VKWAI-SVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 87 ~~~~~-~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+++. ..++.|+||++-..... +.+++.+.+.+.+..+.
T Consensus 209 -~v~~~~~l~~g~~vi~~g~~~p---~~~el~~~~~~~g~~~v 247 (312)
T 2i99_A 209 -PILFGEWVKPGAHINAVGASRP---DWRELDDELMKEAVLYV 247 (312)
T ss_dssp -CCBCGGGSCTTCEEEECCCCST---TCCSBCHHHHHHSEEEE
T ss_pred -cccCHHHcCCCcEEEeCCCCCC---CceeccHHHHhcCEEEE
Confidence 2222 56788999988433222 34677777777786444
No 105
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.68 E-value=8.6e-09 Score=82.98 Aligned_cols=87 Identities=11% Similarity=0.196 Sum_probs=70.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
..||+|||+|.+|..++..+... +++ +.++|+++++++.++++++.. ...++++++++.. .|+|+.+||... .
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r~~~~~~~~a~~~~~~--~~~~~~~~~~~~~--~Divi~at~~~~-~ 93 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-QYK-VTVAGRNIDHVRAFAEKYEYE--YVLINDIDSLIKN--NDVIITATSSKT-P 93 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-TCE-EEEEESCHHHHHHHHHHHTCE--EEECSCHHHHHHT--CSEEEECSCCSS-C
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcCCHHHHHHHHHHhCCc--eEeecCHHHHhcC--CCEEEEeCCCCC-c
Confidence 46899999999999999988774 788 779999999999999998853 2457899999875 999999999873 3
Q ss_pred HHHHHHHHcCCeEE
Q 018020 88 KWAISVAQKKKHLL 101 (362)
Q Consensus 88 ~~~~~al~~gk~V~ 101 (362)
.+....++.|++|+
T Consensus 94 ~~~~~~l~~g~~vi 107 (144)
T 3oj0_A 94 IVEERSLMPGKLFI 107 (144)
T ss_dssp SBCGGGCCTTCEEE
T ss_pred EeeHHHcCCCCEEE
Confidence 23335667777765
No 106
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.68 E-value=2.8e-07 Score=84.07 Aligned_cols=113 Identities=13% Similarity=0.130 Sum_probs=85.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCC--HHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNA-VLSAVASRS--LEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
.++||+|||+|.||..++..|.+. +. + |.++|++ +++.+.+ .+.|+ ..++|++++++. .|+|++++|+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~-G~~~-V~~~dr~~~~~~~~~~-~~~g~----~~~~~~~e~~~~--aDvVi~~vp~ 93 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA-GAID-MAAYDAASAESWRPRA-EELGV----SCKASVAEVAGE--CDVIFSLVTA 93 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH-SCCE-EEEECSSCHHHHHHHH-HHTTC----EECSCHHHHHHH--CSEEEECSCT
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-CCCe-EEEEcCCCCHHHHHHH-HHCCC----EEeCCHHHHHhc--CCEEEEecCc
Confidence 468999999999999999999877 56 5 4489997 4555544 45564 578899999885 8999999999
Q ss_pred cccHHHHHHHHHc--CCeEEEeCCCCCCHHHHHHHHHHHHHc--CCEEEE
Q 018020 84 SMHVKWAISVAQK--KKHLLMEKPMALNVAEFDVILNACEEN--GVQLMD 129 (362)
Q Consensus 84 ~~h~~~~~~al~~--gk~V~~EKP~~~~~~~~~~l~~~a~~~--~~~~~v 129 (362)
..+.+.+...+.. ...++++.- +..+...+++.+...+. |+.+..
T Consensus 94 ~~~~~~~~~l~~~l~~~~ivvd~s-t~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 94 QAALEVAQQAGPHLCEGALYADFT-SCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp TTHHHHHHHHGGGCCTTCEEEECC-CCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred hhHHHHHHhhHhhcCCCCEEEEcC-CCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 9988877665543 235777654 67888899999888887 776653
No 107
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.67 E-value=8.8e-08 Score=86.67 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=81.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
-|||+||+|.||...+..|.+. +++|+ ++|+++++++.+.+. | ....+|+.|+++. .|+|+++.|+..+.+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-G~~V~-v~dr~~~~~~~l~~~-G----~~~~~s~~e~~~~--~dvvi~~l~~~~~~~ 76 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-GYELV-VWNRTASKAEPLTKL-G----ATVVENAIDAITP--GGIVFSVLADDAAVE 76 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEE-EC-------CTTTTT-T----CEECSSGGGGCCT--TCEEEECCSSHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC-CCeEE-EEeCCHHHHHHHHHc-C----CeEeCCHHHHHhc--CCceeeeccchhhHH
Confidence 3799999999999999999887 78866 899999988877543 3 4688999999885 899999999987654
Q ss_pred HH-----HHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Q 018020 89 WA-----ISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDG 130 (362)
Q Consensus 89 ~~-----~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 130 (362)
.+ ...++.| .++++-- +.+++..+++.+.++++|+.+..+
T Consensus 77 ~v~~~~~~~~~~~~-~iiid~s-T~~p~~~~~~~~~~~~~g~~~lda 121 (297)
T 4gbj_A 77 ELFSMELVEKLGKD-GVHVSMS-TISPETSRQLAQVHEWYGAHYVGA 121 (297)
T ss_dssp HHSCHHHHHHHCTT-CEEEECS-CCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhhcCCC-eEEEECC-CCChHHHHHHHHHHHhcCCceecC
Confidence 33 2334444 4677654 678999999999999998776644
No 108
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.65 E-value=1.7e-07 Score=84.89 Aligned_cols=110 Identities=11% Similarity=0.172 Sum_probs=84.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
++||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+.+. |+ ..++|++++++ .|+|++++|+..+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~----~~~~~~~~~~~---aDvvi~~vp~~~~~ 84 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVT-VYDIRIEAMTPLAEA-GA----TLADSVADVAA---ADLIHITVLDDAQV 84 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEE-EECSSTTTSHHHHHT-TC----EECSSHHHHTT---SSEEEECCSSHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEE-EEeCCHHHHHHHHHC-CC----EEcCCHHHHHh---CCEEEEECCChHHH
Confidence 57999999999999999999877 56755 789999988887653 43 57889999987 89999999987665
Q ss_pred HHHHHHHHcC---CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 88 KWAISVAQKK---KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 88 ~~~~~al~~g---k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+.+...+... ..+++..- +..+...+++.+..++.|+.+.
T Consensus 85 ~~v~~~l~~~l~~g~ivv~~s-t~~~~~~~~~~~~~~~~g~~~~ 127 (296)
T 3qha_A 85 REVVGELAGHAKPGTVIAIHS-TISDTTAVELARDLKARDIHIV 127 (296)
T ss_dssp HHHHHHHHTTCCTTCEEEECS-CCCHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHhcCCCCEEEEeC-CCCHHHHHHHHHHHHHcCCEEE
Confidence 5443433321 24566553 5678888999998888887654
No 109
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.65 E-value=2.7e-08 Score=86.09 Aligned_cols=94 Identities=18% Similarity=0.161 Sum_probs=70.6
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
|+++||+|||+|.||..++..+.+. +.+++.++|+++++++++++++|+. ...+..+.++ +.|+|++++|+..
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~~~~~~l~~~~g~~----~~~~~~~~~~--~aDvVilavp~~~ 93 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAA-QIPAIIANSRGPASLSSVTDRFGAS----VKAVELKDAL--QADVVILAVPYDS 93 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCGGGGHHHHHHHTTT----EEECCHHHHT--TSSEEEEESCGGG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHhCCC----cccChHHHHh--cCCEEEEeCChHH
Confidence 3468999999999999999999876 6788877999999999999988863 3444455555 4999999999988
Q ss_pred cHHHHHHHHH-cCCeEE-EeCCC
Q 018020 86 HVKWAISVAQ-KKKHLL-MEKPM 106 (362)
Q Consensus 86 h~~~~~~al~-~gk~V~-~EKP~ 106 (362)
+.+++..... .|+.|+ +-+|+
T Consensus 94 ~~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 94 IADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp HHHHHTTCSCCTTCEEEECCCCB
T ss_pred HHHHHHHhhccCCCEEEEcCCCC
Confidence 8877765421 244333 44454
No 110
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.64 E-value=1.6e-08 Score=88.20 Aligned_cols=129 Identities=9% Similarity=0.026 Sum_probs=100.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
.|||+++|+|.+|+..++. . +++++++++ +++. +.| +..++|++++++ ++|+|+=|.+...-.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~---~k~g----elg----v~a~~d~d~lla--~pD~VVe~A~~~av~ 74 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD---RISK----DIP----GVVRLDEFQVPS--DVSTVVECASPEAVK 74 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S-CCSEEEEEC---SSCC----CCS----SSEECSSCCCCT--TCCEEEECSCHHHHH
T ss_pred cceEEEECcCHHHHHHHhc---C-CcEEEEEEe---cccc----ccC----ceeeCCHHHHhh--CCCEEEECCCHHHHH
Confidence 5899999999999988887 3 899999998 3222 223 367899999995 699999999888778
Q ss_pred HHHHHHHHcCCeEEEeCCCCC-CHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccceEEEEEE
Q 018020 88 KWAISVAQKKKHLLMEKPMAL-NVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSC 161 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EKP~~~-~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~i~~i~~~ 161 (362)
+++.++|++|++|++=-+.+. +.+-.++|.++|++.|..+++..=. .|....+ ... . |.|..+...
T Consensus 75 e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGA--i~GlD~l-~aa-~----g~l~~V~~~ 141 (253)
T 1j5p_A 75 EYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGA--IGGLDVL-SSI-K----DFVKNVRIE 141 (253)
T ss_dssp HHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTT--CCCHHHH-HHH-G----GGEEEEEEE
T ss_pred HHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCc--ccchhHH-HHh-c----CCccEEEEE
Confidence 889999999999998666443 6677799999999999998754333 4445555 333 2 777777765
No 111
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=98.64 E-value=1.5e-08 Score=86.30 Aligned_cols=101 Identities=17% Similarity=0.195 Sum_probs=78.7
Q ss_pred ceeEEEEEeccHHHHHHHHHHh-cCCCcEEEEEEcCCHH-HHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 7 AAIRFGIIGAADIARKLSRAIT-LAPNAVLSAVASRSLE-KATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~-~~~~~~vv~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
++.||+|||+|..|...+..+. ...+++++|++|.+++ +... +.-.|+| +...++++++++..++|.+++++|..
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~-~~i~Gvp--V~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGK-TTEDGIP--VYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTC-BCTTCCB--EEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCc-eeECCeE--EeCHHHHHHHHHHcCCCEEEEecCch
Confidence 5689999999999999888742 3458999999999986 4432 0113554 23357889999988999999999999
Q ss_pred ccHHHHHHHHHcC-CeEEEeCCCCCCH
Q 018020 85 MHVKWAISVAQKK-KHLLMEKPMALNV 110 (362)
Q Consensus 85 ~h~~~~~~al~~g-k~V~~EKP~~~~~ 110 (362)
.+.+++..+.++| +.|+.=.|...++
T Consensus 160 ~aq~v~d~lv~~GIk~I~nFap~~l~v 186 (212)
T 3keo_A 160 EAQEVADILVKAGIKGILSFSPVHLTL 186 (212)
T ss_dssp GHHHHHHHHHHHTCCEEEECSSSCCCC
T ss_pred hHHHHHHHHHHcCCCEEEEcCCcccCC
Confidence 9999999999999 6688877776664
No 112
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.63 E-value=2.3e-07 Score=84.02 Aligned_cols=110 Identities=22% Similarity=0.313 Sum_probs=83.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+|||+|||+|.||..++..+.+. +.+| .++|+++++++.+.+. |+ ..+.+++++++. +|+|++++|+..|.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~-g~~V-~~~~~~~~~~~~~~~~-g~----~~~~~~~~~~~~--~D~vi~~v~~~~~~ 75 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA-GYSL-VVSDRNPEAIADVIAA-GA----ETASTAKAIAEQ--CDVIITMLPNSPHV 75 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-TCEE-EEECSCHHHHHHHHHT-TC----EECSSHHHHHHH--CSEEEECCSSHHHH
T ss_pred cceEEEECchHHHHHHHHHHHhC-CCEE-EEEeCCHHHHHHHHHC-CC----eecCCHHHHHhC--CCEEEEECCCHHHH
Confidence 37999999999999999998876 5775 5899999988887664 53 578899998875 99999999988776
Q ss_pred HHHH-------HHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 88 KWAI-------SVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 88 ~~~~-------~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+.+. ..++.|+. ++..- +......++|.+.+.+.++.+.
T Consensus 76 ~~~~~~~~~l~~~l~~~~~-vv~~s-~~~~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 76 KEVALGENGIIEGAKPGTV-LIDMS-SIAPLASREISDALKAKGVEML 121 (299)
T ss_dssp HHHHHSTTCHHHHCCTTCE-EEECS-CCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHhCcchHhhcCCCCCE-EEECC-CCCHHHHHHHHHHHHHcCCeEE
Confidence 6554 33445654 45543 4455667888888877776654
No 113
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.60 E-value=2.5e-07 Score=83.44 Aligned_cols=119 Identities=11% Similarity=0.085 Sum_probs=79.7
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCC-CcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAP-NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~-~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|+++||+|||+|.||..++..+.+.. +.+|+ ++|+++++++.+.+ .|+. ...++|+++++++ .|+|++++|+.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d~~~~~~~~~~~-~g~~--~~~~~~~~~~~~~--aDvVilavp~~ 77 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIV-GYNRSDRSRDIALE-RGIV--DEATADFKVFAAL--ADVIILAVPIK 77 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEE-EECSSHHHHHHHHH-TTSC--SEEESCTTTTGGG--CSEEEECSCHH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEE-EEcCCHHHHHHHHH-cCCc--ccccCCHHHhhcC--CCEEEEcCCHH
Confidence 34689999999999999999887653 56654 78999988887654 5531 1356788887764 99999999999
Q ss_pred ccHHHHHHHHHc---CCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEee
Q 018020 85 MHVKWAISVAQK---KKHLLMEKPMALNVAEFDVILNACEENGVQLMDGT 131 (362)
Q Consensus 85 ~h~~~~~~al~~---gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~ 131 (362)
.+.+++...... ...+++.. -+......+.+.+...+.+..++.++
T Consensus 78 ~~~~v~~~l~~~~l~~~~ivi~~-~~~~~~~~~~l~~~l~~~~~~~v~~~ 126 (290)
T 3b1f_A 78 KTIDFIKILADLDLKEDVIITDA-GSTKYEIVRAAEYYLKDKPVQFVGSH 126 (290)
T ss_dssp HHHHHHHHHHTSCCCTTCEEECC-CSCHHHHHHHHHHHHTTSSCEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCEEEEC-CCCchHHHHHHHHhccccCCEEEEeC
Confidence 987777765443 13455532 12223334555554443355665543
No 114
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.60 E-value=2.3e-07 Score=86.16 Aligned_cols=93 Identities=9% Similarity=0.224 Sum_probs=71.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---C------CC-cccCCHHHHhcCCCCcE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---P------DA-KVYGSYEALLDDKDIDA 76 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~------~~-~~~~~~~e~l~~~~~D~ 76 (362)
++|||+|||+|.||..++..|.+. +.+|+ ++|+++++++.+.+..++. . .+ ..++++++++. ++|+
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~D~ 78 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALK-GQSVL-AWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK--DADV 78 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT--TCSE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC-CCEEE-EEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHh--cCCE
Confidence 468999999999999999988776 56754 7899999999887775321 0 01 25688989886 4999
Q ss_pred EEEcCCCcccHHHHHHH---HHcCCeEEEe
Q 018020 77 VYLPLPTSMHVKWAISV---AQKKKHLLME 103 (362)
Q Consensus 77 V~i~~~~~~h~~~~~~a---l~~gk~V~~E 103 (362)
|++++|+..+.+++... ++.|+.|++.
T Consensus 79 vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 79 ILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 99999999998887665 3457778777
No 115
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.60 E-value=4e-07 Score=87.84 Aligned_cols=116 Identities=12% Similarity=0.195 Sum_probs=85.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~~h 86 (362)
++||+|||+|.||..++..+.+. +++| .++|+++++++.+.++++- .++..+.|++++++. .++|+|++++|+..+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~~~~-~gi~~~~s~~e~v~~l~~aDvVilavp~~~~ 81 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-GYTV-AIYNRTTSKTEEVFKEHQD-KNLVFTKTLEEFVGSLEKPRRIMLMVQAGAA 81 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-TCCE-EEECSSHHHHHHHHHHTTT-SCEEECSSHHHHHHTBCSSCEEEECCCTTHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-CCEE-EEEcCCHHHHHHHHHhCcC-CCeEEeCCHHHHHhhccCCCEEEEEccCchH
Confidence 57899999999999999999876 5664 5899999999999887620 123578899999874 459999999999876
Q ss_pred HHHHHHHH----HcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 87 VKWAISVA----QKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 87 ~~~~~~al----~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+.+...+ +.|+ ++++. .+....+..++.+.+++.|+.+.
T Consensus 82 v~~vl~~l~~~l~~g~-iiId~-s~~~~~~~~~l~~~l~~~g~~~v 125 (474)
T 2iz1_A 82 TDATIKSLLPLLDIGD-ILIDG-GNTHFPDTMRRNAELADSGINFI 125 (474)
T ss_dssp HHHHHHHHGGGCCTTC-EEEEC-SCCCHHHHHHHHHHTTTSSCEEE
T ss_pred HHHHHHHHHhhCCCCC-EEEEC-CCCCHHHHHHHHHHHHHCCCeEE
Confidence 55554433 3455 45542 23455677888887777776654
No 116
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.59 E-value=4.5e-08 Score=88.62 Aligned_cols=112 Identities=8% Similarity=0.003 Sum_probs=88.8
Q ss_pred eeEEEEE-ec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGII-GA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~ii-G~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
+-+++|| |+ |.+|..++..+++. ++++++.+++.... + +.+|+ .+|.|++|+.+..++|+++|++|+..
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~-G~~~v~~VnP~~~g-~---~i~G~----~vy~sl~el~~~~~vD~avI~vP~~~ 83 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEY-GTNLVGGTTPGKGG-K---THLGL----PVFNTVKEAKEQTGATASVIYVPPPF 83 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTT-C---EETTE----EEESSHHHHHHHHCCCEEEECCCHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHC-CCcEEEEeCCCcCc-c---eECCe----eeechHHHhhhcCCCCEEEEecCHHH
Confidence 3457777 98 99999999998876 68877666665211 0 12354 69999999987446999999999999
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCEEE
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEEN-GVQLM 128 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~-~~~~~ 128 (362)
+.+.+.+|+++|.+.++.-.-..+.++.+++.+.++++ |+.+.
T Consensus 84 ~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 84 AAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEE
Confidence 99999999999977765555577788888999999999 98854
No 117
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.58 E-value=1.7e-07 Score=82.56 Aligned_cols=98 Identities=6% Similarity=0.113 Sum_probs=70.7
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCC---cEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPN---AVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~---~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
++||+|||+|.||..++..+.+... .+| .++|+++++++++++++|+ ..++|.++++++ .|+|++++|+.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V-~~~~r~~~~~~~~~~~~g~----~~~~~~~e~~~~--aDvVilav~~~ 74 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQI-ICSDLNTANLKNASEKYGL----TTTTDNNEVAKN--ADILILSIKPD 74 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGE-EEECSCHHHHHHHHHHHCC----EECSCHHHHHHH--CSEEEECSCTT
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeE-EEEeCCHHHHHHHHHHhCC----EEeCChHHHHHh--CCEEEEEeCHH
Confidence 3689999999999999999877632 154 4899999999999888886 478899999875 89999999887
Q ss_pred ccHHHHHHHH---HcCCeEEEeCCCCCCHHHH
Q 018020 85 MHVKWAISVA---QKKKHLLMEKPMALNVAEF 113 (362)
Q Consensus 85 ~h~~~~~~al---~~gk~V~~EKP~~~~~~~~ 113 (362)
...+++.... +.|+.|+.- --+.+.+..
T Consensus 75 ~~~~v~~~l~~~l~~~~~vvs~-~~gi~~~~l 105 (247)
T 3gt0_A 75 LYASIINEIKEIIKNDAIIVTI-AAGKSIEST 105 (247)
T ss_dssp THHHHC---CCSSCTTCEEEEC-SCCSCHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEEe-cCCCCHHHH
Confidence 7666664432 234444432 234455443
No 118
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=98.57 E-value=9.1e-07 Score=84.99 Aligned_cols=118 Identities=13% Similarity=0.137 Sum_probs=85.5
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~~ 85 (362)
.+++|||||+|.||..++..+.+. +++|+ ++|+++++++.+.++......+..+.|++++++. .++|+|++++|+..
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~ 80 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH-GFVVC-AFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQ 80 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT-TCCEE-EECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChH
Confidence 368999999999999999999887 57755 8899999999887753211112346899999874 46999999999975
Q ss_pred cHHHHHHHHH----cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 86 HVKWAISVAQ----KKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 86 h~~~~~~al~----~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
..+-+...+. .| .++++.- +....+..++.+.+++.|+.+.
T Consensus 81 ~v~~vl~~l~~~L~~g-~iIId~s-t~~~~~t~~~~~~l~~~Gi~fv 125 (484)
T 4gwg_A 81 AVDDFIEKLVPLLDTG-DIIIDGG-NSEYRDTTRRCRDLKAKGILFV 125 (484)
T ss_dssp HHHHHHHHHGGGCCTT-CEEEECS-CCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhcCCC-CEEEEcC-CCCchHHHHHHHHHHhhccccc
Confidence 5444433332 33 4566532 4567788888888888887654
No 119
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.57 E-value=3.3e-08 Score=79.09 Aligned_cols=114 Identities=15% Similarity=0.156 Sum_probs=86.9
Q ss_pred ceeEEEEEec----cHHHHHHHHHHhcCCCcEEEEEEcCCHHH-HHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 7 AAIRFGIIGA----ADIARKLSRAITLAPNAVLSAVASRSLEK-ATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~----G~~g~~~~~~~~~~~~~~vv~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
++-+|+|||+ |.+|..++..+++. +++ |+++++.+ .+.+ .| ..+|.|++|+-+ .+|+++|++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~-G~~---v~~vnp~~~~~~i---~G----~~~~~sl~el~~--~vDlavi~v 78 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQ-GYR---VLPVNPRFQGEEL---FG----EEAVASLLDLKE--PVDILDVFR 78 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHT-TCE---EEEECGGGTTSEE---TT----EECBSSGGGCCS--CCSEEEECS
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHC-CCE---EEEeCCCcccCcC---CC----EEecCCHHHCCC--CCCEEEEEe
Confidence 3568999999 78999999999877 676 55666653 1111 24 468999999876 599999999
Q ss_pred CCcccHHHHHHHHHcC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE-eeecccChh
Q 018020 82 PTSMHVKWAISVAQKK-KHLLMEKPMALNVAEFDVILNACEENGVQLMD-GTMWVHNPR 138 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v-~~~~r~~p~ 138 (362)
|+....+++.+|+++| +.+++..++. .+++.+.|+++|+.+.- ++....+|.
T Consensus 79 p~~~~~~v~~~~~~~gi~~i~~~~g~~-----~~~~~~~a~~~Gir~vgpnc~g~~~~~ 132 (140)
T 1iuk_A 79 PPSALMDHLPEVLALRPGLVWLQSGIR-----HPEFEKALKEAGIPVVADRCLMVEHKR 132 (140)
T ss_dssp CHHHHTTTHHHHHHHCCSCEEECTTCC-----CHHHHHHHHHTTCCEEESCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCcC-----HHHHHHHHHHcCCEEEcCCccceEChh
Confidence 9999999999999999 6788875543 38899999999998764 454445444
No 120
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=98.57 E-value=6.8e-08 Score=89.61 Aligned_cols=101 Identities=19% Similarity=0.318 Sum_probs=68.0
Q ss_pred CCccCCceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---------CCCccc-CCHHHHh
Q 018020 1 MATESQAAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---------PDAKVY-GSYEALL 69 (362)
Q Consensus 1 m~~~~~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---------~~~~~~-~~~~e~l 69 (362)
|+...+.++||+|+| +|.+|..+++.|.++|+++|+++++......+.+.+.++.- .+..+. .+.++++
T Consensus 1 m~~~~~M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1ys4_A 1 MSKGEKMKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEE 80 (354)
T ss_dssp ------CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGG
T ss_pred CCCcccccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHh
Confidence 543332258999999 79999999999999999999999852222223333333210 001111 2455554
Q ss_pred cCCCCcEEEEcCCCcccHHHHHHHHHcCCeEEE
Q 018020 70 DDKDIDAVYLPLPTSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~ 102 (362)
+ .++|+|+.|+|...|.+++..++++|++|+.
T Consensus 81 ~-~~~DvV~~atp~~~~~~~a~~~~~aG~~VId 112 (354)
T 1ys4_A 81 F-EDVDIVFSALPSDLAKKFEPEFAKEGKLIFS 112 (354)
T ss_dssp G-TTCCEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred c-CCCCEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 4 2699999999999999999999999999764
No 121
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.57 E-value=8e-08 Score=86.82 Aligned_cols=109 Identities=14% Similarity=0.208 Sum_probs=81.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+|||+|||+|.||..++..+.+. +.+|+ ++| ++++++.+.+. |+ ..++++++++++ +|+|++++|...|.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~-~~~~~~~~~~~-g~----~~~~~~~~~~~~--~D~vi~~vp~~~~~ 72 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA-GHQLH-VTT-IGPVADELLSL-GA----VNVETARQVTEF--ADIIFIMVPDTPQV 72 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT-TCEEE-ECC-SSCCCHHHHTT-TC----BCCSSHHHHHHT--CSEEEECCSSHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCEEE-EEc-CHHHHHHHHHc-CC----cccCCHHHHHhc--CCEEEEECCCHHHH
Confidence 47999999999999999998876 67765 788 88777777554 43 568899999875 99999999999886
Q ss_pred HHHHH-------HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 88 KWAIS-------VAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 88 ~~~~~-------al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+.+.. .++.|+.| +... +.+....++|.+.+.+.++.++
T Consensus 73 ~~v~~~~~~l~~~l~~~~~v-v~~s-~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 73 EDVLFGEHGCAKTSLQGKTI-VDMS-SISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp HHHHHSTTSSTTSCCTTEEE-EECS-CCCHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHhCchhHhhcCCCCCEE-EECC-CCCHHHHHHHHHHHHHcCCeEE
Confidence 66654 23445554 4443 3456778888888887776654
No 122
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.56 E-value=3.9e-08 Score=87.49 Aligned_cols=110 Identities=12% Similarity=0.103 Sum_probs=84.1
Q ss_pred EEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH-
Q 018020 10 RFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK- 88 (362)
Q Consensus 10 ~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~- 88 (362)
+|+|||+|.+|+.++..+.+. +++ +.++|+++++++.++++++. . +++++++ . +.|+|+++||+..|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~-v~v~~r~~~~~~~l~~~~~~----~-~~~~~~~-~--~~Divi~~tp~~~~~~~ 187 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLE-VWVWNRTPQRALALAEEFGL----R-AVPLEKA-R--EARLLVNATRVGLEDPS 187 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCC-EEEECSSHHHHHHHHHHHTC----E-ECCGGGG-G--GCSEEEECSSTTTTCTT
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCE-EEEEECCHHHHHHHHHHhcc----c-hhhHhhc-c--CCCEEEEccCCCCCCCC
Confidence 899999999999999999877 455 56999999999999998874 2 6788887 4 5999999999987742
Q ss_pred ---HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeec
Q 018020 89 ---WAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMW 133 (362)
Q Consensus 89 ---~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 133 (362)
+....++.|++|+ + ++.+..+. ++.+.+++.|+.++.|...
T Consensus 188 ~~~l~~~~l~~g~~vi-D--~~~~p~~t-~l~~~a~~~g~~~v~g~~m 231 (263)
T 2d5c_A 188 ASPLPAELFPEEGAAV-D--LVYRPLWT-RFLREAKAKGLKVQTGLPM 231 (263)
T ss_dssp CCSSCGGGSCSSSEEE-E--SCCSSSSC-HHHHHHHHTTCEEECSHHH
T ss_pred CCCCCHHHcCCCCEEE-E--eecCCccc-HHHHHHHHCcCEEECcHHH
Confidence 2245567777655 5 44444444 5888889999988766443
No 123
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.54 E-value=6.4e-07 Score=79.49 Aligned_cols=104 Identities=12% Similarity=0.155 Sum_probs=80.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
|||+|||+|.||..++..|.+. +++|+. +|+ +++.++.+.+. |+ . +|.+++++. .|+|++++|+..+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~-g~~V~~-~~~~~~~~~~~~~~~~-g~----~--~~~~~~~~~--aDvvi~~v~~~~~ 69 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR-GVEVVT-SLEGRSPSTIERARTV-GV----T--ETSEEDVYS--CPVVISAVTPGVA 69 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEE-CCTTCCHHHHHHHHHH-TC----E--ECCHHHHHT--SSEEEECSCGGGH
T ss_pred CeEEEEechHHHHHHHHHHHHC-CCeEEE-eCCccCHHHHHHHHHC-CC----c--CCHHHHHhc--CCEEEEECCCHHH
Confidence 4799999999999999999876 577765 788 77777776553 53 3 678888874 9999999999988
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
.+.+...+...++++++. -+.+....++|.+...+.+
T Consensus 70 ~~~~~~~~~~~~~~vi~~-s~~~~~~~~~l~~~~~~~g 106 (264)
T 1i36_A 70 LGAARRAGRHVRGIYVDI-NNISPETVRMASSLIEKGG 106 (264)
T ss_dssp HHHHHHHHTTCCSEEEEC-SCCCHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHhcCcEEEEc-cCCCHHHHHHHHHHHhhCC
Confidence 888766655444488887 4667778888888776665
No 124
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.53 E-value=2.2e-07 Score=83.64 Aligned_cols=110 Identities=11% Similarity=0.109 Sum_probs=83.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
+||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+.+. |+ ...+|++++++. .|+|++++|+..+.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-G~~V~-~~dr~~~~~~~~~~~-g~----~~~~~~~~~~~~--advvi~~v~~~~~~~ 72 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-GFDVT-VWNRNPAKCAPLVAL-GA----RQASSPAEVCAA--CDITIAMLADPAAAR 72 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-TCCEE-EECSSGGGGHHHHHH-TC----EECSCHHHHHHH--CSEEEECCSSHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHC-CCeEE-EEcCCHHHHHHHHHC-CC----eecCCHHHHHHc--CCEEEEEcCCHHHHH
Confidence 4799999999999999998776 56655 789999988887664 43 578899999985 899999999976554
Q ss_pred HHH---H----HHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 89 WAI---S----VAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 89 ~~~---~----al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
.+. . .++.|+ +++..- +.++...+++.+.+++.|+.+..
T Consensus 73 ~v~~~~~~l~~~l~~g~-~vv~~s-t~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 73 EVCFGANGVLEGIGGGR-GYIDMS-TVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp HHHHSTTCGGGTCCTTC-EEEECS-CCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCchhhhhcccCCC-EEEECC-CCCHHHHHHHHHHHHHcCCEEEE
Confidence 443 2 233444 555543 56788889999988888877553
No 125
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=98.53 E-value=7.1e-08 Score=89.04 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=67.3
Q ss_pred ceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CC--CCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 7 AAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FP--PDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 7 ~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~--~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
+++||+|+| +|.+|+.+++.|.++|++++++++++.. ..+++.+.++ +. .. ..+.++++ + .++|+|+.|+|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~-~g~~~~~~~~~~~g~~~-~~~~~~~~-~--~~vDvV~~a~g 77 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRF-AGEPVHFVHPNLRGRTN-LKFVPPEK-L--EPADILVLALP 77 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTT-TTSBGGGTCGGGTTTCC-CBCBCGGG-C--CCCSEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchh-hCchhHHhCchhcCccc-ccccchhH-h--cCCCEEEEcCC
Confidence 469999999 6999999999999999999999998542 2222222221 00 01 12344544 4 36999999999
Q ss_pred CcccHHHHHHHHHcCCeEEE
Q 018020 83 TSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~ 102 (362)
...|.+++..++++|++|+.
T Consensus 78 ~~~s~~~a~~~~~aG~~VId 97 (345)
T 2ozp_A 78 HGVFAREFDRYSALAPVLVD 97 (345)
T ss_dssp TTHHHHTHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999998775
No 126
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.48 E-value=2.8e-07 Score=82.95 Aligned_cols=107 Identities=13% Similarity=0.082 Sum_probs=78.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
+||+|||+|.||..++..+.+ +.+| .++|+++++++.+.+. |+ ..++ +++++. ++|+|++++|+..|.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V-~~~~~~~~~~~~~~~~-g~----~~~~-~~~~~~--~~D~vi~~v~~~~~~~ 70 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPT-LVWNRTFEKALRHQEE-FG----SEAV-PLERVA--EARVIFTCLPTTREVY 70 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCE-EEECSSTHHHHHHHHH-HC----CEEC-CGGGGG--GCSEEEECCSSHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeE-EEEeCCHHHHHHHHHC-CC----cccC-HHHHHh--CCCEEEEeCCChHHHH
Confidence 579999999999999999887 6775 4899999988887665 43 3444 677776 4999999999988665
Q ss_pred HHHHHH----HcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 89 WAISVA----QKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 89 ~~~~al----~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+...+ +.|+.|+.. -..+....+++.+.+++.++.+.
T Consensus 71 ~v~~~l~~~l~~~~~vv~~--s~~~~~~~~~l~~~~~~~g~~~~ 112 (289)
T 2cvz_A 71 EVAEALYPYLREGTYWVDA--TSGEPEASRRLAERLREKGVTYL 112 (289)
T ss_dssp HHHHHHTTTCCTTEEEEEC--SCCCHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHHHHhhCCCCCEEEEC--CCCCHHHHHHHHHHHHHcCCEEE
Confidence 544333 345555543 23456777888888887776654
No 127
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.46 E-value=2.8e-06 Score=81.93 Aligned_cols=118 Identities=15% Similarity=0.187 Sum_probs=84.0
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTS 84 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~ 84 (362)
|.+.||+|||+|.||..++..|.+. +++|+ ++|+++++++.+.++.+ ..++..+.|++++++. .++|+|++++|+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-G~~V~-v~~r~~~~~~~l~~~~~-~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~ 89 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-GYTVS-IFNRSREKTEEVIAENP-GKKLVPYYTVKEFVESLETPRRILLMVKAG 89 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-TCCEE-EECSSHHHHHHHHHHST-TSCEEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHhhCC-CCCeEEeCCHHHHHhCCCCCCEEEEECCCH
Confidence 3478999999999999999999876 67754 89999999999888752 0123578899998874 4589999999996
Q ss_pred ccHHHHHHHHH----cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 85 MHVKWAISVAQ----KKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 85 ~h~~~~~~al~----~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
...+-+...+. .|+ +++. --........++.+.+++.++.+.
T Consensus 90 ~~v~~vl~~l~~~l~~g~-iIId-~s~g~~~~t~~l~~~l~~~g~~~v 135 (480)
T 2zyd_A 90 AGTDAAIDSLKPYLDKGD-IIID-GGNTFFQDTIRRNRELSAEGFNFI 135 (480)
T ss_dssp SHHHHHHHHHGGGCCTTC-EEEE-CSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhhcCCCC-EEEE-CCCCCHHHHHHHHHHHHHCCCCee
Confidence 55443433332 243 5554 123456677778888877777654
No 128
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.46 E-value=7.7e-07 Score=81.19 Aligned_cols=111 Identities=10% Similarity=0.141 Sum_probs=81.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
++||+|||+|.||..++..+.+. +.+| .++|+++++++.+.+ .|+ ..+.+.++++++ +|+|++++|+..+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~-g~~V-~~~~~~~~~~~~~~~-~g~----~~~~~~~~~~~~--~DvVi~av~~~~~~ 100 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM-GHTV-TVWNRTAEKCDLFIQ-EGA----RLGRTPAEVVST--CDITFACVSDPKAA 100 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-TCCE-EEECSSGGGGHHHHH-TTC----EECSCHHHHHHH--CSEEEECCSSHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCEE-EEEeCCHHHHHHHHH-cCC----EEcCCHHHHHhc--CCEEEEeCCCHHHH
Confidence 48999999999999999998776 5665 588999988887765 453 567899998874 89999999977666
Q ss_pred HHHHHH-------HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 88 KWAISV-------AQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 88 ~~~~~a-------l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
+.+... ++.|+.|+. . -+.+....+++.+.+.+.+..+..
T Consensus 101 ~~v~~~~~~~~~~l~~~~~vv~-~-s~~~~~~~~~l~~~~~~~~~~~v~ 147 (316)
T 2uyy_A 101 KDLVLGPSGVLQGIRPGKCYVD-M-STVDADTVTELAQVIVSRGGRFLE 147 (316)
T ss_dssp HHHHHSTTCGGGGCCTTCEEEE-C-SCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCchhHhhcCCCCCEEEE-C-CCCCHHHHHHHHHHHHHcCCEEEE
Confidence 555432 345555552 2 235667788888888777766543
No 129
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.45 E-value=4.3e-08 Score=87.84 Aligned_cols=77 Identities=16% Similarity=0.202 Sum_probs=57.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+|||+|||+|.||..++..+.+. ++|+.++|+++++++.++++++. .+.|+++++++ +|+|++++|+..+.
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~--~DvVilav~~~~~~ 72 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVYGG-----KAATLEKHPEL--NGVVFVIVPDRYIK 72 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHTCC-----CCCSSCCCCC-----CEEECSCTTTHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeCCHHHHHHHHHHcCC-----ccCCHHHHHhc--CCEEEEeCChHHHH
Confidence 47899999999999999988765 67767899999999999888763 46677777764 89999999999887
Q ss_pred HHHHHH
Q 018020 88 KWAISV 93 (362)
Q Consensus 88 ~~~~~a 93 (362)
+++...
T Consensus 73 ~v~~~l 78 (276)
T 2i76_A 73 TVANHL 78 (276)
T ss_dssp HHHTTT
T ss_pred HHHHHh
Confidence 776543
No 130
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.44 E-value=2.3e-06 Score=82.53 Aligned_cols=116 Identities=18% Similarity=0.266 Sum_probs=83.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC---CCCCcccCCHHHHhcC-CCCcEEEEcCCCc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF---PPDAKVYGSYEALLDD-KDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~---~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~ 84 (362)
|||+|||+|.||..++..+.+. +++| .++|+++++++.+.+++|. +.++..+.|++++++. +++|+|++++|+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-G~~V-~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~ 79 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-GFKV-AVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG 79 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCE-EEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred CEEEEEChHHHHHHHHHHHHHC-CCEE-EEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCCh
Confidence 5799999999999999999877 5664 5899999999999887662 1113467899998863 3599999999998
Q ss_pred ccHHHHHHHH----HcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 85 MHVKWAISVA----QKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 85 ~h~~~~~~al----~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+.+.+...+ +.|+ ++++. .........++.+.+++.|+.+.
T Consensus 80 ~~v~~vl~~l~~~l~~g~-iIId~-sng~~~~~~~l~~~l~~~g~~~v 125 (478)
T 1pgj_A 80 AATDSTIEQLKKVFEKGD-ILVDT-GNAHFKDQGRRAQQLEAAGLRFL 125 (478)
T ss_dssp HHHHHHHHHHHHHCCTTC-EEEEC-CCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHhhCCCCC-EEEEC-CCCChHHHHHHHHHHHHCCCeEE
Confidence 6654444333 3454 55542 23455667778887777776543
No 131
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.40 E-value=3.6e-06 Score=81.31 Aligned_cols=113 Identities=13% Similarity=0.156 Sum_probs=82.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH-H---cCCCCCCcccCCHHHHhcC-CCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK-A---NNFPPDAKVYGSYEALLDD-KDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~-~---~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~ 82 (362)
++||+|||+|.||..++..+.+. +++| .++|+++++++.+.+ + .| +..+.|++++++. .++|+|++++|
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~~-G~~V-~v~dr~~~~~~~l~~~~~~g~g----i~~~~~~~e~v~~l~~aDvVilaVp 75 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDH-GFVV-CAFNRTVSKVDDFLANEAKGTK----VLGAHSLEEMVSKLKKPRRIILLVK 75 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCE-EEECSSTHHHHHHHHTTTTTSS----CEECSSHHHHHHHBCSSCEEEECSC
T ss_pred CCeEEEEChHHHHHHHHHHHHHC-CCeE-EEEeCCHHHHHHHHhccccCCC----eEEeCCHHHHHhhccCCCEEEEeCC
Confidence 47899999999999999999876 5664 589999999988876 3 33 3578899998852 35999999999
Q ss_pred CcccHHHHHHH----HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 83 TSMHVKWAISV----AQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 83 ~~~h~~~~~~a----l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+..+.+.+... ++.|+ ++++. -+....+..++.+.+++.|+.+.
T Consensus 76 ~~~~v~~vl~~l~~~l~~g~-iII~~-s~~~~~~~~~l~~~l~~~g~~~v 123 (482)
T 2pgd_A 76 AGQAVDNFIEKLVPLLDIGD-IIIDG-GNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp TTHHHHHHHHHHHHHCCTTC-EEEEC-SCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHHhhcCCCC-EEEEC-CCCCHHHHHHHHHHHHHcCCeEe
Confidence 98665444433 33455 55542 23455667778777777776654
No 132
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=98.39 E-value=1.9e-07 Score=86.62 Aligned_cols=92 Identities=14% Similarity=0.223 Sum_probs=67.2
Q ss_pred CceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCC----cccCCHHHHhcCCCCcEEEEc
Q 018020 6 QAAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDA----KVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 6 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~----~~~~~~~e~l~~~~~D~V~i~ 80 (362)
|+++||+|+| +|.+|+.+++.|.++|.+++++++++. +..+++...++.-.+. ..+.+ ++.++ ++|+|+.|
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~--~vDvVf~a 89 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-KAGQSMESVFPHLRAQKLPTLVSVK-DADFS--TVDAVFCC 89 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-TTTSCHHHHCGGGTTSCCCCCBCGG-GCCGG--GCSEEEEC
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-hcCCCHHHhCchhcCcccccceecc-hhHhc--CCCEEEEc
Confidence 4579999999 799999999999999999999999864 2333444443310110 11222 34443 69999999
Q ss_pred CCCcccHHHHHHHHHcCCeEEE
Q 018020 81 LPTSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~gk~V~~ 102 (362)
+|...|.+.+..+ ++|..|+-
T Consensus 90 tp~~~s~~~a~~~-~aG~~VId 110 (359)
T 1xyg_A 90 LPHGTTQEIIKEL-PTALKIVD 110 (359)
T ss_dssp CCTTTHHHHHHTS-CTTCEEEE
T ss_pred CCchhHHHHHHHH-hCCCEEEE
Confidence 9999999999999 99987654
No 133
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=98.39 E-value=3.1e-06 Score=77.25 Aligned_cols=110 Identities=13% Similarity=0.055 Sum_probs=82.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCC-cEEEEEEcCCH-------HHHHHHHHHcCCCCCCcccC-CHHHHhcCCCCcEEE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPN-AVLSAVASRSL-------EKATNFAKANNFPPDAKVYG-SYEALLDDKDIDAVY 78 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~-~~vv~v~d~~~-------~~~~~~~~~~~~~~~~~~~~-~~~e~l~~~~~D~V~ 78 (362)
++||+|||+|.||...+..|.+. + .+|+ ++|+++ +..+.+. +.| . ++ |++++++. .|+|+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~-G~~~V~-~~dr~~~~~~~~~~~~~~~~-~~g----~--~~~s~~e~~~~--aDvVi 92 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR-NAARLA-AYDLRFNDPAASGALRARAA-ELG----V--EPLDDVAGIAC--ADVVL 92 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCSEEE-EECGGGGCTTTHHHHHHHHH-HTT----C--EEESSGGGGGG--CSEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHc-CCCeEE-EEeCCCccccchHHHHHHHH-HCC----C--CCCCHHHHHhc--CCEEE
Confidence 47999999999999999999877 5 6765 789987 3344333 234 2 66 88888875 89999
Q ss_pred EcCCCcccHHHHHHHHHcC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 79 LPLPTSMHVKWAISVAQKK--KHLLMEKPMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 79 i~~~~~~h~~~~~~al~~g--k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
+++|+....+.+...+..- ..+++..- +..+...+++.+..++.|+.+..
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTSSCEEEE
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHcCCeEEe
Confidence 9999998888776554431 34666654 67888999999988888876643
No 134
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.37 E-value=4.3e-07 Score=80.53 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=57.0
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
|||+|||+|.||..++..+.+....+ |.++|+++++++.+++++|+ ..+.++++++ ++|+|++++|+....+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~-v~~~~r~~~~~~~~~~~~g~----~~~~~~~~~~---~~D~vi~~v~~~~~~~ 72 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYR-IYIANRGAEKRERLEKELGV----ETSATLPELH---SDDVLILAVKPQDMEA 72 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCE-EEEECSSHHHHHHHHHHTCC----EEESSCCCCC---TTSEEEECSCHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCe-EEEECCCHHHHHHHHHhcCC----EEeCCHHHHh---cCCEEEEEeCchhHHH
Confidence 57999999999999999887652155 45899999999999888875 4677777776 4999999999443333
No 135
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.36 E-value=5e-06 Score=75.73 Aligned_cols=105 Identities=10% Similarity=-0.026 Sum_probs=72.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCc--EEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHH-HhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNA--VLSAVASRSLEKATNFAKANNFPPDAKVYGSYEA-LLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~--~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e-~l~~~~~D~V~i~~~~~ 84 (362)
.+||+|||+|.||..++..+.+. +. +|+ ++|+++++++.+. +.|+. ...++++++ +++. +|+|++++|+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~-~~dr~~~~~~~a~-~~G~~--~~~~~~~~~~~~~~--aDvVilavp~~ 105 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIY-GYDINPESISKAV-DLGII--DEGTTSIAKVEDFS--PDFVMLSSPVR 105 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEE-EECSCHHHHHHHH-HTTSC--SEEESCTTGGGGGC--CSEEEECSCGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEE-EEECCHHHHHHHH-HCCCc--chhcCCHHHHhhcc--CCEEEEeCCHH
Confidence 47999999999999999999877 44 654 7899998877654 45542 135678888 7775 99999999998
Q ss_pred ccHHHHHHHHHc--CCeEEEeCCCCCCHHHHHHHHHHH
Q 018020 85 MHVKWAISVAQK--KKHLLMEKPMALNVAEFDVILNAC 120 (362)
Q Consensus 85 ~h~~~~~~al~~--gk~V~~EKP~~~~~~~~~~l~~~a 120 (362)
...+++...... ...++++-- +......+++.+..
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~d~~-Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVTDQG-SVKGKLVYDLENIL 142 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEEECC-SCCTHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCcEEEECC-CCcHHHHHHHHHhc
Confidence 877766655442 234666631 22333344454443
No 136
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.35 E-value=2.3e-07 Score=82.98 Aligned_cols=112 Identities=19% Similarity=0.268 Sum_probs=82.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
..||+|||+|.+|..++..+.+. +++ +.+++|++++++.+++++++ .++++++++++ +.|+|+++||...+.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~-g~~-V~v~~r~~~~~~~l~~~~g~----~~~~~~~~~~~--~aDiVi~atp~~~~~ 200 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKE-GAK-VFLWNRTKEKAIKLAQKFPL----EVVNSPEEVID--KVQVIVNTTSVGLKD 200 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHH-TCE-EEEECSSHHHHHHHTTTSCE----EECSCGGGTGG--GCSEEEECSSTTSST
T ss_pred CCEEEEECchHHHHHHHHHHHHc-CCE-EEEEECCHHHHHHHHHHcCC----eeehhHHhhhc--CCCEEEEeCCCCCCC
Confidence 46899999999999999998876 455 56899999999999888774 45668888876 499999999998764
Q ss_pred H---HH-HHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeec
Q 018020 88 K---WA-ISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMW 133 (362)
Q Consensus 88 ~---~~-~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 133 (362)
. .+ ...++.|+.|+ + ++. ...++++.+++.|+.++.|...
T Consensus 201 ~~~~~i~~~~l~~g~~vi-D--v~~---~~t~ll~~a~~~g~~~v~g~~m 244 (275)
T 2hk9_A 201 EDPEIFNYDLIKKDHVVV-D--IIY---KETKLLKKAKEKGAKLLDGLPM 244 (275)
T ss_dssp TCCCSSCGGGCCTTSEEE-E--SSS---SCCHHHHHHHHTTCEEECSHHH
T ss_pred CCCCCCCHHHcCCCCEEE-E--cCC---ChHHHHHHHHHCcCEEECCHHH
Confidence 2 22 23455666544 4 333 3455778888889888776443
No 137
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.31 E-value=3.1e-06 Score=80.01 Aligned_cols=111 Identities=13% Similarity=0.079 Sum_probs=74.9
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC-------------CCCCcccCCHHHHhcCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF-------------PPDAKVYGSYEALLDDKD 73 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~-------------~~~~~~~~~~~e~l~~~~ 73 (362)
..|||+|||+|.||...+..+.+ +.+|+ ++|+++++.+.+.+...- ..+..+.+|+++.+++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~--G~~V~-~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~-- 109 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ--NHEVV-ALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRN-- 109 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT--TSEEE-EECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTT--
T ss_pred CCCEEEEECcCHHHHHHHHHHHc--CCeEE-EEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhC--
Confidence 45899999999999999888875 78876 789999998887652100 0123567889888885
Q ss_pred CcEEEEcCCCcccH-------HHHHHH------HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 74 IDAVYLPLPTSMHV-------KWAISV------AQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 74 ~D~V~i~~~~~~h~-------~~~~~a------l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
.|+|++++|+.... ..+..+ ++.|. +++.|- +..+...+++.+...+.+
T Consensus 110 aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~-iVV~~S-Tv~pgtt~~l~~~l~~~~ 171 (432)
T 3pid_A 110 ADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNA-VMIIKS-TIPVGFTRDIKERLGIDN 171 (432)
T ss_dssp CSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTS-EEEECS-CCCTTHHHHHHHHHTCCC
T ss_pred CCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCc-EEEEeC-CCChHHHHHHHHHHhhcc
Confidence 99999999997431 122211 44554 445543 455556666666655443
No 138
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.29 E-value=7e-06 Score=73.32 Aligned_cols=100 Identities=11% Similarity=0.151 Sum_probs=71.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
|||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+. ++|+. ...+++++++ . ++|+|++++|+..+.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~-~--~~D~vi~av~~~~~~~ 72 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR-GHYLI-GVSRQQSTCEKAV-ERQLV--DEAGQDLSLL-Q--TAKIIFLCTPIQLILP 72 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHH-HTTSC--SEEESCGGGG-T--TCSEEEECSCHHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHH-hCCCC--ccccCCHHHh-C--CCCEEEEECCHHHHHH
Confidence 4799999999999999998876 56755 6799999888875 56653 1356788888 4 5999999999988777
Q ss_pred HHHHHHH---cCCeEEEeCCCCCCHHHHHHHHH
Q 018020 89 WAISVAQ---KKKHLLMEKPMALNVAEFDVILN 118 (362)
Q Consensus 89 ~~~~al~---~gk~V~~EKP~~~~~~~~~~l~~ 118 (362)
++..... .|+ +++.- -+.+....+++.+
T Consensus 73 ~~~~l~~~~~~~~-~vv~~-~~~~~~~~~~~~~ 103 (279)
T 2f1k_A 73 TLEKLIPHLSPTA-IVTDV-ASVKTAIAEPASQ 103 (279)
T ss_dssp HHHHHGGGSCTTC-EEEEC-CSCCHHHHHHHHH
T ss_pred HHHHHHhhCCCCC-EEEEC-CCCcHHHHHHHHH
Confidence 7765543 233 45543 3345555554443
No 139
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.27 E-value=1.1e-05 Score=78.14 Aligned_cols=115 Identities=16% Similarity=0.183 Sum_probs=83.3
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH-HcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCccc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK-ANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTSMH 86 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~~h 86 (362)
.+|+|||+|.||..++..|.+. +++|+ ++|+++++++.+.+ +.. ..++..+.|++++++. .++|+|++++|+...
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-G~~V~-v~dr~~~~~~~l~~~~~~-~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 87 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-GFTVC-AYNRTQSKVDHFLANEAK-GKSIIGATSIEDFISKLKRPRKVMLLVKAGAP 87 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEE-EECSSSHHHHHHHHTTTT-TSSEECCSSHHHHHHTSCSSCEEEECCCSSHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHccccc-CCCeEEeCCHHHHHhcCCCCCEEEEEcCChHH
Confidence 5799999999999999999877 67754 89999999998877 421 0123567899998864 458999999999755
Q ss_pred HHHHHHHHH----cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 87 VKWAISVAQ----KKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 87 ~~~~~~al~----~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+-+...+. .| .+++.- -+......+++.+.+++.|+.+.
T Consensus 88 v~~vl~~l~~~l~~g-~iIId~-s~~~~~~~~~l~~~l~~~g~~~v 131 (497)
T 2p4q_A 88 VDALINQIVPLLEKG-DIIIDG-GNSHFPDSNRRYEELKKKGILFV 131 (497)
T ss_dssp HHHHHHHHGGGCCTT-CEEEEC-SCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhCCCC-CEEEEC-CCCChhHHHHHHHHHHHcCCcee
Confidence 444444333 23 355552 24566778888888888777654
No 140
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.27 E-value=2.2e-06 Score=82.80 Aligned_cols=77 Identities=12% Similarity=0.234 Sum_probs=56.8
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcC-CCcEEEEEEcCCHHHHHHHHHHcCCC---------------CCCcccCCHHHHh
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLA-PNAVLSAVASRSLEKATNFAKANNFP---------------PDAKVYGSYEALL 69 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~-~~~~vv~v~d~~~~~~~~~~~~~~~~---------------~~~~~~~~~~e~l 69 (362)
+++|||+|||+|.||..++..|.+. ++.+|+ ++|+++++++.+.+. +.+ .+..+.+|+.+.+
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~-~~D~~~~~v~~l~~g-~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~ 84 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVT-VVDMNTAKIAEWNSD-KLPIYEPGLDEIVFAARGRNLFFSSDIPKAI 84 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECSCHHHHHHHTSS-SCSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEECCHHHHHHHHCC-CCCcCCCCHHHHHHHhhcCCEEEECCHHHHh
Confidence 4568999999999999999888765 367866 689999998887542 111 0124556777777
Q ss_pred cCCCCcEEEEcCCCccc
Q 018020 70 DDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~h 86 (362)
++ .|+|++++|++.+
T Consensus 85 ~~--aDvvii~Vptp~~ 99 (481)
T 2o3j_A 85 AE--ADLIFISVNTPTK 99 (481)
T ss_dssp HH--CSEEEECCCCCBC
T ss_pred hc--CCEEEEecCCccc
Confidence 64 8999999887653
No 141
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=98.26 E-value=7.1e-07 Score=71.24 Aligned_cols=90 Identities=18% Similarity=0.173 Sum_probs=67.0
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcc--cCCHHHHhcCCCCcEEEEcCCCc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKV--YGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~--~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
++.++.|||+|..|..++..+++.++++++|++|.+++.... .-.|+ .+ .+++.+++...++|.|+|+.|..
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~--~i~g~----pV~g~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKT--TMQGI----TIYRPKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTC--EETTE----EEECGGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCC--EecCe----EEECHHHHHHHHHHCCCCEEEEeCCCC
Confidence 467999999999999999999888899999999987643210 01233 23 35666777666799999999876
Q ss_pred cc---HHHHHHHHHcCCeEEE
Q 018020 85 MH---VKWAISVAQKKKHLLM 102 (362)
Q Consensus 85 ~h---~~~~~~al~~gk~V~~ 102 (362)
.+ .+++..+.+.|.+|.+
T Consensus 77 ~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 77 SQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp CHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEE
Confidence 55 5666777777877764
No 142
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.26 E-value=2.8e-06 Score=74.54 Aligned_cols=78 Identities=6% Similarity=0.184 Sum_probs=62.3
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHH--------------HHHHHHHcCCCCCCcccCCHHHHhcCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEK--------------ATNFAKANNFPPDAKVYGSYEALLDDK 72 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~e~l~~~ 72 (362)
..+||+|||+|.||..++..|.+. +.+|+ ++|+++++ .+.++++++. ..+.|.++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~-G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~e~~~~- 90 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL-GHEVT-IGTRDPKATLARAEPDAMGAPPFSQWLPEHPH----VHLAAFADVAAG- 90 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESCHHHHHTCC-------CCHHHHGGGSTT----CEEEEHHHHHHH-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCEEE-EEeCChhhhhhhhhhhhhcchhhhHHHhhcCc----eeccCHHHHHhc-
Confidence 468999999999999999999877 57765 78999987 5555555542 357889999875
Q ss_pred CCcEEEEcCCCcccHHHHHH
Q 018020 73 DIDAVYLPLPTSMHVKWAIS 92 (362)
Q Consensus 73 ~~D~V~i~~~~~~h~~~~~~ 92 (362)
.|+|++++|+....+.+..
T Consensus 91 -aDvVilavp~~~~~~~~~~ 109 (245)
T 3dtt_A 91 -AELVVNATEGASSIAALTA 109 (245)
T ss_dssp -CSEEEECSCGGGHHHHHHH
T ss_pred -CCEEEEccCcHHHHHHHHH
Confidence 8999999999988777654
No 143
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.25 E-value=5.5e-06 Score=79.21 Aligned_cols=73 Identities=8% Similarity=0.128 Sum_probs=57.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC---------------CCCCcccCCHHHHhcCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF---------------PPDAKVYGSYEALLDDKD 73 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~---------------~~~~~~~~~~~e~l~~~~ 73 (362)
|||+|||+|.||...+..|.+. +.+|+ ++|+++++.+.+.+.... +......+|+++.+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G~~V~-~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~-- 78 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-GANVR-CIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPE-- 78 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHhc-CCEEE-EEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhc--
Confidence 7999999999999999999877 67866 789999998888762110 1123456888888875
Q ss_pred CcEEEEcCCCcc
Q 018020 74 IDAVYLPLPTSM 85 (362)
Q Consensus 74 ~D~V~i~~~~~~ 85 (362)
.|+|++++|++.
T Consensus 79 aDvViiaVptp~ 90 (450)
T 3gg2_A 79 ADIIFIAVGTPA 90 (450)
T ss_dssp CSEEEECCCCCB
T ss_pred CCEEEEEcCCCc
Confidence 899999999884
No 144
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=98.24 E-value=2.7e-06 Score=77.76 Aligned_cols=100 Identities=19% Similarity=0.192 Sum_probs=72.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CHHHHHHHH---HHcCCC---------------CCCccc--CCHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SLEKATNFA---KANNFP---------------PDAKVY--GSYE 66 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~~~~~~~~---~~~~~~---------------~~~~~~--~~~~ 66 (362)
++||||+|+|.+|+..++.+.++|+++|+++.|. +.+.+..+. ..+|.- ....++ .+.+
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE 80 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChh
Confidence 3799999999999999999999999999999997 444444443 112200 011222 1444
Q ss_pred HH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCCC
Q 018020 67 AL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPMA 107 (362)
Q Consensus 67 e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~~ 107 (362)
++ ..+.++|+|+-|||.....+.+...+++| |.|++.-|..
T Consensus 81 ~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~ 123 (334)
T 3cmc_O 81 NLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAK 123 (334)
T ss_dssp GCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred hcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCc
Confidence 44 23237999999999999999999999999 6688877743
No 145
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.19 E-value=1.4e-06 Score=80.31 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=66.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
.+||+|||+|.||..++..+++. +++++ ++++++++..+.+.+.|+ .++ +++++++. .|+|++++|+..+.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~-G~~V~-~~~~~~~~~~~~a~~~G~----~~~-~~~e~~~~--aDvVilavp~~~~~ 86 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS-GVDVT-VGLRSGSATVAKAEAHGL----KVA-DVKTAVAA--ADVVMILTPDEFQG 86 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-TCCEE-EECCTTCHHHHHHHHTTC----EEE-CHHHHHHT--CSEEEECSCHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC-cCEEE-EEECChHHHHHHHHHCCC----EEc-cHHHHHhc--CCEEEEeCCcHHHH
Confidence 46899999999999999999876 56765 788887665566677775 344 88888875 99999999999988
Q ss_pred HHHH-HH---HHcCCeEEE
Q 018020 88 KWAI-SV---AQKKKHLLM 102 (362)
Q Consensus 88 ~~~~-~a---l~~gk~V~~ 102 (362)
+++. .. ++.|+.|+.
T Consensus 87 ~v~~~~i~~~l~~~~ivi~ 105 (338)
T 1np3_A 87 RLYKEEIEPNLKKGATLAF 105 (338)
T ss_dssp HHHHHHTGGGCCTTCEEEE
T ss_pred HHHHHHHHhhCCCCCEEEE
Confidence 7776 32 334555554
No 146
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.19 E-value=6.9e-06 Score=75.08 Aligned_cols=80 Identities=15% Similarity=0.224 Sum_probs=59.3
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCC---CcEEEEEEcCCHH--HHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAP---NAVLSAVASRSLE--KATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~---~~~vv~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
|++|||+|||+|.||..++..|.+.. ..+|+ ++|++++ +++.+. ++|+ .+.++..+++.. .|+|+++
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~-v~~r~~~~~~~~~l~-~~G~----~~~~~~~e~~~~--aDvVila 91 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIM-ASSPDMDLATVSALR-KMGV----KLTPHNKETVQH--SDVLFLA 91 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEE-EECSCTTSHHHHHHH-HHTC----EEESCHHHHHHH--CSEEEEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEE-EECCCccHHHHHHHH-HcCC----EEeCChHHHhcc--CCEEEEE
Confidence 45689999999999999999987663 15554 7899875 677664 4564 567788888875 8999999
Q ss_pred CCCcccHHHHHHH
Q 018020 81 LPTSMHVKWAISV 93 (362)
Q Consensus 81 ~~~~~h~~~~~~a 93 (362)
+|+....+++...
T Consensus 92 v~~~~~~~vl~~l 104 (322)
T 2izz_A 92 VKPHIIPFILDEI 104 (322)
T ss_dssp SCGGGHHHHHHHH
T ss_pred eCHHHHHHHHHHH
Confidence 9976555555443
No 147
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=98.17 E-value=2e-05 Score=70.49 Aligned_cols=106 Identities=10% Similarity=0.013 Sum_probs=71.1
Q ss_pred eEEEEEeccHHHHHHHHHHhcCC-CcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 9 IRFGIIGAADIARKLSRAITLAP-NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~-~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+||+|||+|.||..++..+.+.. ..+|+ ++|+++++++.+ .++|+. ...++|+++++.+ +.|+|++++|+..+.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~-~~d~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~-~aDvVilavp~~~~~ 76 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIY-GYDINPESISKA-VDLGII--DEGTTSIAKVEDF-SPDFVMLSSPVRTFR 76 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEE-EECSCHHHHHHH-HHTTSC--SEEESCGGGGGGT-CCSEEEECSCHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEE-EEeCCHHHHHHH-HHCCCc--ccccCCHHHHhcC-CCCEEEEcCCHHHHH
Confidence 47999999999999999988763 12655 789999887765 456642 1246788888872 499999999999887
Q ss_pred HHHHHHHH---cCCeEEEeCCCCCCHHHHHHHHHHHH
Q 018020 88 KWAISVAQ---KKKHLLMEKPMALNVAEFDVILNACE 121 (362)
Q Consensus 88 ~~~~~al~---~gk~V~~EKP~~~~~~~~~~l~~~a~ 121 (362)
+++..... .+ .+++..- +......+.+.+...
T Consensus 77 ~v~~~l~~~l~~~-~iv~~~~-~~~~~~~~~l~~~l~ 111 (281)
T 2g5c_A 77 EIAKKLSYILSED-ATVTDQG-SVKGKLVYDLENILG 111 (281)
T ss_dssp HHHHHHHHHSCTT-CEEEECC-SCCTHHHHHHHHHHG
T ss_pred HHHHHHHhhCCCC-cEEEECC-CCcHHHHHHHHHhcc
Confidence 77765433 33 3555421 222333344444443
No 148
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=98.17 E-value=2.2e-06 Score=78.71 Aligned_cols=101 Identities=15% Similarity=0.082 Sum_probs=69.1
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEc-C-CHHHHHHH---HHHcCCCCC---------------CcccC--
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVAS-R-SLEKATNF---AKANNFPPD---------------AKVYG-- 63 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d-~-~~~~~~~~---~~~~~~~~~---------------~~~~~-- 63 (362)
++++||||+|+|.+|+..++.+.++|+++|++|.| . +.+....+ ...+|.-++ ..++.
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~ 94 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAK 94 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCS
T ss_pred CcceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecC
Confidence 35789999999999999999999999999999999 3 33322221 111221011 01221
Q ss_pred CHHHHh-cCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 64 SYEALL-DDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 64 ~~~e~l-~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+.+++. .+.++|+|+-|||.....+.+...+++| |.|++.-|.
T Consensus 95 dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 95 DPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp CGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred ChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCC
Confidence 444431 1136999999999999999999999999 558887774
No 149
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.15 E-value=8e-06 Score=76.01 Aligned_cols=80 Identities=9% Similarity=0.123 Sum_probs=59.8
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC---------CCCCCcccCCHHHHhcCCCCcEEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN---------FPPDAKVYGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~e~l~~~~~D~V~i 79 (362)
+||+|||+|.||..++..|.+. +.+|. ++|+++++++.+.+... ++.++...+|+++++.. .|+|++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~-G~~V~-~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aDvVil 91 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK-CREVC-VWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG--AEIILF 91 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT-EEEEE-EECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT--CSSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcC--CCEEEE
Confidence 4999999999999999998765 56654 78999998888876531 11123456788888874 899999
Q ss_pred cCCCcccHHHHHH
Q 018020 80 PLPTSMHVKWAIS 92 (362)
Q Consensus 80 ~~~~~~h~~~~~~ 92 (362)
++|+....+++..
T Consensus 92 av~~~~~~~v~~~ 104 (366)
T 1evy_A 92 VIPTQFLRGFFEK 104 (366)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHH
Confidence 9998655555433
No 150
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.15 E-value=7.1e-06 Score=78.28 Aligned_cols=73 Identities=12% Similarity=0.129 Sum_probs=56.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC----------------CCCcccCCHHHHhcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP----------------PDAKVYGSYEALLDDK 72 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~----------------~~~~~~~~~~e~l~~~ 72 (362)
|||+|||+|.||..++..|.+. +.+|+ ++|+++++.+.+.+.. .+ ......+|+++.+++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~-G~~V~-~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~- 76 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR-GHEVI-GVDVSSTKIDLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLD- 76 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHT-
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhcc-
Confidence 4899999999999999998876 57755 6899999988876521 10 013467788888875
Q ss_pred CCcEEEEcCCCccc
Q 018020 73 DIDAVYLPLPTSMH 86 (362)
Q Consensus 73 ~~D~V~i~~~~~~h 86 (362)
.|+|++++|++.+
T Consensus 77 -aDvviiaVptp~~ 89 (436)
T 1mv8_A 77 -SDVSFICVGTPSK 89 (436)
T ss_dssp -CSEEEECCCCCBC
T ss_pred -CCEEEEEcCCCcc
Confidence 9999999998775
No 151
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=98.15 E-value=0.00014 Score=66.17 Aligned_cols=211 Identities=10% Similarity=0.084 Sum_probs=131.4
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCC-cEEEEEEc--CCHHHHHHHHHHcCCCCCCcccCC-----------------HH
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPN-AVLSAVAS--RSLEKATNFAKANNFPPDAKVYGS-----------------YE 66 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~-~~vv~v~d--~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 66 (362)
+-||.|+|. |+||..-+..++++|+ ++|+++.- ++.+.+.+.+++|+. ...+..| +.
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p--~~v~v~d~~~~~~~~~~v~~G~~~l~ 98 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGV--TNIAVADEHAAQRVGDIPYHGSDAAT 98 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCC--CCEEESCHHHHHHHCCCSEESTTHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCC--CEEEEcCHHHhhhcCCEEEecHHHHH
Confidence 357999995 9999999999999986 99999765 788888888888873 2223322 33
Q ss_pred HHhcCCCCcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCC-HHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHh
Q 018020 67 ALLDDKDIDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALN-VAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEF 145 (362)
Q Consensus 67 e~l~~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~-~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~ 145 (362)
++...+++|.|+.+..-..-..-...|+++||.|.+--- .+ +....=+.+++++++ .+ .-......+-|+
T Consensus 99 ~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLANK--EsLV~aG~lv~~~a~~~~-il------PVDSEHsAIfQ~ 169 (398)
T 2y1e_A 99 RLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANK--ESLVAGGSLVLRAARPGQ-IV------PVDSEHSALAQC 169 (398)
T ss_dssp HHHHHSCCSEEEECCCSGGGHHHHHHHHHHTCEEEECCH--HHHHHHTHHHHHHCCTTC-EE------ECSHHHHHHHHH
T ss_pred HHhcCCCCCEEEEeCcCHHHHHHHHHHHHCCCceEEccc--chheecHHHHHHHHHHcC-ce------EecchHhHHHHH
Confidence 455556799999999999999999999999999987311 12 233344556667777 22 346666777888
Q ss_pred hcCCCCccceEEEEEEeeecCCccccc--------CccCcCCCCCCC-ccccccc---chHHHH--HHHHccCCCCcEEE
Q 018020 146 VSDPQRFGQLRTMHSCFSFAGDAEFLK--------NDIRVKPDLDGL-GALGDAG---WYGIRS--ILWANDYELPKTVI 211 (362)
Q Consensus 146 i~~~g~iG~i~~i~~~~~~~~~~~~~~--------~~w~~~~~~~gg-g~l~~~g---~h~id~--~~~l~g~~~~~~V~ 211 (362)
+ ..+...+|..+-..-+..+...+.. ..=-.+|.++-| .+-.|.. --.+.+ ..||||. +++++.
T Consensus 170 L-~g~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmNKGLEvIEA~~LF~~-~~d~I~ 247 (398)
T 2y1e_A 170 L-RGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGI-PYDRID 247 (398)
T ss_dssp G-GGSCGGGEEEEEEEECCCTTTTCCHHHHTTCCTTTC-------CCHHHHHHHHHSHHHHHHHHHHHHHHCC-CGGGEE
T ss_pred h-CCCCcccccEEEEECCccccCCCCHHHHhCCCHHHHhhCCCcccCceeeehhHhHhhhhHHHHHHHHHcCC-CHHHeE
Confidence 7 4344456777666554332211100 000001111111 1111110 011222 5899995 467777
Q ss_pred EeeccccCCCCeeEeeEEEEEeCCCcE
Q 018020 212 AMHGPVLNEAGVILSCGASLHWDDGRV 238 (362)
Q Consensus 212 a~~~~~~~~~~~~d~~~~~~~~~~G~~ 238 (362)
....+ ....+.+++|.||.+
T Consensus 248 VvVHP-------QSiIHSmVef~DGSv 267 (398)
T 2y1e_A 248 VVVHP-------QSIIHSMVTFIDGST 267 (398)
T ss_dssp EEECT-------TCCEEEEEEETTSCE
T ss_pred EEECC-------CCceeEEEEEeCCcE
Confidence 77432 225688999999976
No 152
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.15 E-value=6.3e-06 Score=73.99 Aligned_cols=76 Identities=21% Similarity=0.321 Sum_probs=59.7
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
++||+|||+ |.||..++..+.+. +.+|+ ++|+++++++.+.+ +|+. . .+..++++. .|+|++++|+...
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~-g~~V~-~~~r~~~~~~~~~~-~g~~----~-~~~~~~~~~--aDvVi~av~~~~~ 80 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS-AHHLA-AIEIAPEGRDRLQG-MGIP----L-TDGDGWIDE--ADVVVLALPDNII 80 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS-SSEEE-EECCSHHHHHHHHH-TTCC----C-CCSSGGGGT--CSEEEECSCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHHh-cCCC----c-CCHHHHhcC--CCEEEEcCCchHH
Confidence 369999999 99999999999876 57766 89999998888765 6642 2 366777764 9999999999876
Q ss_pred HHHHHHH
Q 018020 87 VKWAISV 93 (362)
Q Consensus 87 ~~~~~~a 93 (362)
.+++...
T Consensus 81 ~~v~~~l 87 (286)
T 3c24_A 81 EKVAEDI 87 (286)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 153
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.14 E-value=4.8e-06 Score=76.50 Aligned_cols=89 Identities=20% Similarity=0.174 Sum_probs=65.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC--CCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD--KDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~--~~~D~V~i~~~~~~ 85 (362)
..||+|||+|.||..++..+++. +.+|+ ++|+++++++.+ .+.|+ ..++|++++++. .+.|+|++++|+..
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~-G~~V~-~~dr~~~~~~~a-~~~G~----~~~~~~~e~~~~a~~~aDlVilavP~~~ 80 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA-NHSVF-GYNRSRSGAKSA-VDEGF----DVSADLEATLQRAAAEDALIVLAVPMTA 80 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-TCCEE-EECSCHHHHHHH-HHTTC----CEESCHHHHHHHHHHTTCEEEECSCHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHH-HHcCC----eeeCCHHHHHHhcccCCCEEEEeCCHHH
Confidence 46899999999999999999877 56655 789999887765 55665 467899998864 25899999999865
Q ss_pred cHHHHHHHHHcC-CeEEEe
Q 018020 86 HVKWAISVAQKK-KHLLME 103 (362)
Q Consensus 86 h~~~~~~al~~g-k~V~~E 103 (362)
-.+++....... ..++++
T Consensus 81 ~~~vl~~l~~~~~~~iv~D 99 (341)
T 3ktd_A 81 IDSLLDAVHTHAPNNGFTD 99 (341)
T ss_dssp HHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHHHccCCCCEEEE
Confidence 555544333222 235555
No 154
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=98.13 E-value=2.3e-05 Score=71.65 Aligned_cols=100 Identities=20% Similarity=0.137 Sum_probs=71.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcC--CCcEEEEEEcC-CHHHHHHHHH---HcCCCCC---------------Ccc--cCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLA--PNAVLSAVASR-SLEKATNFAK---ANNFPPD---------------AKV--YGS 64 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~--~~~~vv~v~d~-~~~~~~~~~~---~~~~~~~---------------~~~--~~~ 64 (362)
++||||+|+|.+|+..++.+.++ |++++++|.|+ +++.+..+.+ .+|..++ ..+ ..|
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 48999999999999999999888 89999999987 5444443321 1111000 111 234
Q ss_pred HHHHh-cCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCCC
Q 018020 65 YEALL-DDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPMA 107 (362)
Q Consensus 65 ~~e~l-~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~~ 107 (362)
++++. .+.++|+|+-||+...-.+.+...+++| |-|++.-|-.
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~ 126 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK 126 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCC
Confidence 55552 3347999999999999999999999999 6677766643
No 155
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.12 E-value=1.6e-05 Score=76.49 Aligned_cols=76 Identities=11% Similarity=0.130 Sum_probs=55.7
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCC-CcEEEEEEcCCHHHHHHHHHHc--------------CCCCCCcccCCHHHHhcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAP-NAVLSAVASRSLEKATNFAKAN--------------NFPPDAKVYGSYEALLDDK 72 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~-~~~vv~v~d~~~~~~~~~~~~~--------------~~~~~~~~~~~~~e~l~~~ 72 (362)
++||+|||+|.||..++..|.+.. +.+|+ ++|+++++.+.+.+.. +...+....+|+++.+++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~-~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~- 82 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVT-VVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE- 82 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH-
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc-
Confidence 579999999999999998887653 67765 7899999888753210 000123456788888874
Q ss_pred CCcEEEEcCCCccc
Q 018020 73 DIDAVYLPLPTSMH 86 (362)
Q Consensus 73 ~~D~V~i~~~~~~h 86 (362)
.|+|++++|++.+
T Consensus 83 -aDvViiaVptp~~ 95 (467)
T 2q3e_A 83 -ADLVFISVNTPTK 95 (467)
T ss_dssp -CSEEEECCCCCBC
T ss_pred -CCEEEEEcCCchh
Confidence 8999999887665
No 156
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.11 E-value=8.4e-06 Score=75.51 Aligned_cols=98 Identities=15% Similarity=0.218 Sum_probs=69.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC---------CCCCCcccCCHHHHhcCCCCcEE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN---------FPPDAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~e~l~~~~~D~V 77 (362)
.++||+|||+|.||..++..|.+. +.+|. ++++++++++.+.+... ++.+....+|+++.+++ .|+|
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~-G~~V~-l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~--aDvV 103 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK-GQKVR-LWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG--VTDI 103 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT-TCCEE-EECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTT--CCEE
T ss_pred cCCeEEEECccHHHHHHHHHHHHC-CCeEE-EEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhc--CCEE
Confidence 368999999999999999998876 56654 88999999888877531 12223456899998875 8999
Q ss_pred EEcCCCcccHHHHHHHH---HcCCeE-EEeCCCCC
Q 018020 78 YLPLPTSMHVKWAISVA---QKKKHL-LMEKPMAL 108 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al---~~gk~V-~~EKP~~~ 108 (362)
++++|+....+++.... +.+..| .+-|.+..
T Consensus 104 ilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 104 LIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp EECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBT
T ss_pred EECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCc
Confidence 99999875555554432 234433 35565543
No 157
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=98.10 E-value=3.7e-06 Score=77.70 Aligned_cols=92 Identities=14% Similarity=0.265 Sum_probs=66.7
Q ss_pred ceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC------CC---CCCccc-CCHHHHhcCCCCc
Q 018020 7 AAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN------FP---PDAKVY-GSYEALLDDKDID 75 (362)
Q Consensus 7 ~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~------~~---~~~~~~-~~~~e~l~~~~~D 75 (362)
+++|||||| +|..|..+++.|.++|.++|+.+.+++. ..+.+.+.+. ++ .+..+. .+.++ + .++|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~--~~vD 81 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M--DDVD 81 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C--TTCC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEeCCHHH-h--cCCC
Confidence 579999999 5999999999999999999999987643 2333433321 00 011111 12222 3 3699
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEE
Q 018020 76 AVYLPLPTSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 76 ~V~i~~~~~~h~~~~~~al~~gk~V~~ 102 (362)
+|+.|+|.....+++..++++|..|+-
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~~vID 108 (359)
T 4dpl_A 82 IIFSPLPQGAAGPVEEQFAKEGFPVIS 108 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred EEEECCChHHHHHHHHHHHHCCCEEEE
Confidence 999999999999999999999987663
No 158
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=98.10 E-value=3.7e-06 Score=77.70 Aligned_cols=92 Identities=14% Similarity=0.265 Sum_probs=66.7
Q ss_pred ceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC------CC---CCCccc-CCHHHHhcCCCCc
Q 018020 7 AAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN------FP---PDAKVY-GSYEALLDDKDID 75 (362)
Q Consensus 7 ~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~------~~---~~~~~~-~~~~e~l~~~~~D 75 (362)
+++|||||| +|..|..+++.|.++|.++|+.+.+++. ..+.+.+.+. ++ .+..+. .+.++ + .++|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~--~~vD 81 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M--DDVD 81 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C--TTCC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEeCCHHH-h--cCCC
Confidence 579999999 5999999999999999999999987643 2333433321 00 011111 12222 3 3699
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEE
Q 018020 76 AVYLPLPTSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 76 ~V~i~~~~~~h~~~~~~al~~gk~V~~ 102 (362)
+|+.|+|.....+++..++++|..|+-
T Consensus 82 vvf~a~p~~~s~~~a~~~~~~G~~vID 108 (359)
T 4dpk_A 82 IIFSPLPQGAAGPVEEQFAKEGFPVIS 108 (359)
T ss_dssp EEEECCCTTTHHHHHHHHHHTTCEEEE
T ss_pred EEEECCChHHHHHHHHHHHHCCCEEEE
Confidence 999999999999999999999987663
No 159
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=98.10 E-value=1.3e-05 Score=73.03 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=69.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CHHHHHHHHHHcCCC----CCC---------------cccC--CH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SLEKATNFAKANNFP----PDA---------------KVYG--SY 65 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~~~~~~~~~~~~~~----~~~---------------~~~~--~~ 65 (362)
++||||+|+|.+|+..++.+.++|+++|+++.|. +.+....+ .+|... ++. .++. |.
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l-~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM-LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHH-HHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHh-hcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 3799999999999999999999999999999997 34433322 223211 010 0121 33
Q ss_pred HHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 66 EAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 66 ~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+++ ..+.++|+|+-|||.....+.+...+++| |-|.+--|+
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred hhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 443 11136999999999999999999999999 446665554
No 160
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.10 E-value=1.1e-05 Score=76.77 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=76.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC---------------CCCCcccCCHHHHhcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF---------------PPDAKVYGSYEALLDD 71 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~---------------~~~~~~~~~~~e~l~~ 71 (362)
..+||++||+|.||...+..|.+. +.+|+ ++|+++++.+.+.+...- +....+.+|+.+.+++
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~-G~~V~-~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~ 84 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF-GHEVV-CVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKD 84 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhc
Confidence 358999999999999999999877 67766 789999988887653110 1123567889888885
Q ss_pred CCCcEEEEcCCCccc----------HHHHHHHH----HcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 018020 72 KDIDAVYLPLPTSMH----------VKWAISVA----QKKKHLLMEKPMALNVAEFDVILNACEEN 123 (362)
Q Consensus 72 ~~~D~V~i~~~~~~h----------~~~~~~al----~~gk~V~~EKP~~~~~~~~~~l~~~a~~~ 123 (362)
.|+|++++|++.. .+-+.+.+ +.| .+++.+- +..+...+++.+..++.
T Consensus 85 --aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g-~iVV~~S-Tv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 85 --ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKP-SVIVTKS-TVPVGTGDEVERIIAEV 146 (446)
T ss_dssp --CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSC-CEEEECS-CCCTTHHHHHHHHHHHH
T ss_pred --CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCC-CEEEEeC-CCCchHHHHHHHHHHHh
Confidence 8999999776642 23332222 234 3555554 56667777777766654
No 161
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=98.08 E-value=5e-05 Score=68.02 Aligned_cols=81 Identities=9% Similarity=0.102 Sum_probs=60.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc------------CCCC--------CCcccCCHHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN------------NFPP--------DAKVYGSYEA 67 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~------------~~~~--------~~~~~~~~~e 67 (362)
..||+|||+|.||...+..+... +++|+ ++|+++++++++.+.. ++.. .....+|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-GFAVT-AYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 56899999999999999998877 67765 7899999887765541 1110 1245788888
Q ss_pred HhcCCCCcEEEEcCCCc--ccHHHHHH
Q 018020 68 LLDDKDIDAVYLPLPTS--MHVKWAIS 92 (362)
Q Consensus 68 ~l~~~~~D~V~i~~~~~--~h~~~~~~ 92 (362)
.+++ +|+|+.++|.. ....+...
T Consensus 82 ~~~~--aDlVi~av~~~~~~~~~v~~~ 106 (283)
T 4e12_A 82 AVKD--ADLVIEAVPESLDLKRDIYTK 106 (283)
T ss_dssp HTTT--CSEEEECCCSCHHHHHHHHHH
T ss_pred Hhcc--CCEEEEeccCcHHHHHHHHHH
Confidence 8875 99999999987 44444443
No 162
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.07 E-value=3e-05 Score=74.68 Aligned_cols=109 Identities=11% Similarity=0.142 Sum_probs=71.3
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc------CC---------CCCCcccCCHHHHhcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN------NF---------PPDAKVYGSYEALLDD 71 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~------~~---------~~~~~~~~~~~e~l~~ 71 (362)
..|||+|||+|.||...+..|.+. +.+|+ ++|+++++.+.+.+.. ++ +....+.+|+++.+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~-G~~V~-~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI-GHDVF-CLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 368999999999999999998876 67755 7899999988876542 10 0113456777777764
Q ss_pred CCCcEEEEcCCCc----------ccHHHHHHHH---HcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 018020 72 KDIDAVYLPLPTS----------MHVKWAISVA---QKKKHLLMEKPMALNVAEFDVILNACE 121 (362)
Q Consensus 72 ~~~D~V~i~~~~~----------~h~~~~~~al---~~gk~V~~EKP~~~~~~~~~~l~~~a~ 121 (362)
.|+|++++|++ .....+.... +.| .+++.|- +..+...+++.+...
T Consensus 85 --aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~-~iVV~~S-Tv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 85 --GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGF-KVIVDKS-TVPVGTAERVRAAVA 143 (478)
T ss_dssp --CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSC-EEEEECS-CCCTTHHHHHHHHHH
T ss_pred --CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCC-CEEEEeC-CcCCCchHHHHHHHH
Confidence 89999999884 2233333222 223 4556664 544555555555443
No 163
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=98.07 E-value=8.3e-06 Score=74.70 Aligned_cols=99 Identities=17% Similarity=0.169 Sum_probs=71.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhc---CCCcEEEEEEcC-CHHHHHHHHH---HcCCCC---------------CCccc--C
Q 018020 8 AIRFGIIGAADIARKLSRAITL---APNAVLSAVASR-SLEKATNFAK---ANNFPP---------------DAKVY--G 63 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~---~~~~~vv~v~d~-~~~~~~~~~~---~~~~~~---------------~~~~~--~ 63 (362)
++||||+|+|.+|+..++.+.+ +|+++|++|.|. +++.+..+.+ .+|.-+ ...++ .
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~ 81 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHER 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecC
Confidence 4899999999999999999988 899999999996 5554444332 111100 01122 2
Q ss_pred CHHHHh-cCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 64 SYEALL-DDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 64 ~~~e~l-~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
|++++. .+.++|+|+-|||.....+.+...+++| |.|++.-|-
T Consensus 82 dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 82 SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 344431 2126999999999999999999999999 568888775
No 164
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.05 E-value=2e-05 Score=62.16 Aligned_cols=120 Identities=12% Similarity=0.074 Sum_probs=74.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcc---cCCHHHHhc--CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKV---YGSYEALLD--DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~---~~~~~e~l~--~~~~D~V~i~~~ 82 (362)
.|+|+|+|+|.+|..++..|.+. +.+++ ++|+++++.+.+.+++++. .+ ..+.+.+.+ ..++|+|++++|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g~~v~-~~d~~~~~~~~~~~~~~~~---~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-GHDIV-LIDIDKDICKKASAEIDAL---VINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESCHHHHHHHHHHCSSE---EEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEE-EEECCHHHHHHHHHhcCcE---EEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 57999999999999999999876 57765 6789999888887776642 12 224444322 246999999999
Q ss_pred CcccHHHHHHHH-HcC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHh
Q 018020 83 TSMHVKWAISVA-QKK-KHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEF 145 (362)
Q Consensus 83 ~~~h~~~~~~al-~~g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~ 145 (362)
+......+..++ +.+ +++++. +.+....+ ..++.|... -++|.......+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~---~~~~~~~~----~l~~~g~~~------v~~p~~~~~~~~ 130 (140)
T 1lss_A 79 KEEVNLMSSLLAKSYGINKTIAR---ISEIEYKD----VFERLGVDV------VVSPELIAANYI 130 (140)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEE---CSSTTHHH----HHHHTTCSE------EECHHHHHHHHH
T ss_pred CchHHHHHHHHHHHcCCCEEEEE---ecCHhHHH----HHHHcCCCE------EECHHHHHHHHH
Confidence 875544444433 334 456653 23333322 334566533 246665544443
No 165
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.03 E-value=7.7e-06 Score=72.33 Aligned_cols=82 Identities=17% Similarity=0.193 Sum_probs=60.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCC---cEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPN---AVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~---~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
++||+|||+|.||..++..+.+... .+| .++|+++++ +|+ ...++.+++++. .|+|++++|+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v-~~~~~~~~~-------~g~----~~~~~~~~~~~~--~D~vi~~v~~~ 69 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENL-FYYGPSKKN-------TTL----NYMSSNEELARH--CDIIVCAVKPD 69 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGE-EEECSSCCS-------SSS----EECSCHHHHHHH--CSEEEECSCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeE-EEEeCCccc-------Cce----EEeCCHHHHHhc--CCEEEEEeCHH
Confidence 5799999999999999988876531 454 578998765 454 567889888874 99999999987
Q ss_pred ccHHHHHHHHH--cCCeEEEe
Q 018020 85 MHVKWAISVAQ--KKKHLLME 103 (362)
Q Consensus 85 ~h~~~~~~al~--~gk~V~~E 103 (362)
...+++..... .++.|++.
T Consensus 70 ~~~~v~~~l~~~l~~~~vv~~ 90 (262)
T 2rcy_A 70 IAGSVLNNIKPYLSSKLLISI 90 (262)
T ss_dssp THHHHHHHSGGGCTTCEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEE
Confidence 77666655432 24445543
No 166
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.02 E-value=8.5e-06 Score=69.96 Aligned_cols=69 Identities=19% Similarity=0.298 Sum_probs=53.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
.++||+|||+|.||..++..+.+. +.+++ ++|+++++++.+.+. |+ ... +++++++ ++|+|++++|+..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~-g~~V~-~~~r~~~~~~~~~~~-g~----~~~-~~~~~~~--~~DvVi~av~~~~ 95 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS-GFKVV-VGSRNPKRTARLFPS-AA----QVT-FQEEAVS--SPEVIFVAVFREH 95 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEE-EEESSHHHHHHHSBT-TS----EEE-EHHHHTT--SCSEEEECSCGGG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHHc-CC----cee-cHHHHHh--CCCEEEECCChHH
Confidence 458999999999999999998876 56655 689999887776443 43 333 7888876 4999999999754
No 167
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.00 E-value=1.2e-06 Score=79.69 Aligned_cols=112 Identities=8% Similarity=0.049 Sum_probs=74.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH----cCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA----NNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~----~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
.-+++|||+|.+|..++..+.....++-+.|+||+ ++++++++ +|++ +..+ |+++++.. .|+|+.+||.
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~--~~~~-~~~eav~~--aDIVi~aT~s 193 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVP--ARMA-APADIAAQ--ADIVVTATRS 193 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSC--EEEC-CHHHHHHH--CSEEEECCCC
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCe--EEEe-CHHHHHhh--CCEEEEccCC
Confidence 46899999999999999998765346667799999 66666554 5653 2345 99999985 9999999998
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDG 130 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 130 (362)
.. .-+-...++.|.||.. ++.+..+.+|+-...-+....+++.
T Consensus 194 ~~-pvl~~~~l~~G~~V~~---vGs~~p~~~El~~~~~~~a~~v~vD 236 (313)
T 3hdj_A 194 TT-PLFAGQALRAGAFVGA---IGSSLPHTRELDDEALRRARAVVVE 236 (313)
T ss_dssp SS-CSSCGGGCCTTCEEEE---CCCSSTTCCCCCHHHHHHCSEEEES
T ss_pred CC-cccCHHHcCCCcEEEE---CCCCCCchhhcCHHHHhcCCEEEEC
Confidence 53 1111345788999986 3333222344443333334345554
No 168
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=97.98 E-value=1.2e-05 Score=73.39 Aligned_cols=98 Identities=20% Similarity=0.205 Sum_probs=69.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcC--CCcEEEEEEcC-CHHHHHHHH---HHcCCCC---------------CCccc--CCH
Q 018020 9 IRFGIIGAADIARKLSRAITLA--PNAVLSAVASR-SLEKATNFA---KANNFPP---------------DAKVY--GSY 65 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~--~~~~vv~v~d~-~~~~~~~~~---~~~~~~~---------------~~~~~--~~~ 65 (362)
+||||+|+|.+|+..++.+.++ |+++|++|.|. +.+.+..+. ..+|.-+ ...++ .+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 5899999999999999999888 99999999996 444443332 1122100 01122 134
Q ss_pred HHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 66 EAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 66 ~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+++ ..+.++|+|+-|||.....+.+...+++| |.|++.-|.
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a 123 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA 123 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred HHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCC
Confidence 443 22226999999999999999999999999 558877664
No 169
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.98 E-value=4.3e-06 Score=80.17 Aligned_cols=76 Identities=14% Similarity=0.186 Sum_probs=54.6
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHH----HHHHHHHHcC-C----------------CCCCcccC
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLE----KATNFAKANN-F----------------PPDAKVYG 63 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~----~~~~~~~~~~-~----------------~~~~~~~~ 63 (362)
+..+||+|||+|.||...+..+.+.|+. +|+ ++|++++ +.+.+.+... + +....+.+
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~-~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt 94 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVL-GFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP 94 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEE-EECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEE-EEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC
Confidence 3468999999999999999998877677 866 7899998 8877754211 0 01123345
Q ss_pred CHHHHhcCCCCcEEEEcCCCcc
Q 018020 64 SYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 64 ~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
+ .+.+++ .|+|++++|++.
T Consensus 95 d-~ea~~~--aDvViiaVptp~ 113 (478)
T 3g79_A 95 D-FSRISE--LDAVTLAIQTPF 113 (478)
T ss_dssp C-GGGGGG--CSEEEECCCCCC
T ss_pred c-HHHHhc--CCEEEEecCCch
Confidence 5 455554 899999988874
No 170
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=97.97 E-value=4e-05 Score=70.84 Aligned_cols=100 Identities=20% Similarity=0.130 Sum_probs=70.7
Q ss_pred eeEEEEEeccHHHHHHHHHHhcC--CCcEEEEEEcC-CHHHHHHHHHH---cCCCCC---------------Ccc--cCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLA--PNAVLSAVASR-SLEKATNFAKA---NNFPPD---------------AKV--YGS 64 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~--~~~~vv~v~d~-~~~~~~~~~~~---~~~~~~---------------~~~--~~~ 64 (362)
++||||+|+|.+|+..++.+..+ |+++|++|.|. +.+.+..+.+- +|..++ ..+ ..|
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 48999999999999999998888 89999999997 55544333211 111000 011 124
Q ss_pred HHHHh-cCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCCC
Q 018020 65 YEALL-DDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPMA 107 (362)
Q Consensus 65 ~~e~l-~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~~ 107 (362)
++++. .+.++|+|+-||+...-.+.+...+++| |.|++.-|-.
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~ 126 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGK 126 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCC
Confidence 44442 1126999999999999999999999999 6677776643
No 171
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.96 E-value=2.8e-06 Score=74.73 Aligned_cols=112 Identities=13% Similarity=0.169 Sum_probs=79.0
Q ss_pred EEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH--
Q 018020 10 RFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV-- 87 (362)
Q Consensus 10 ~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~-- 87 (362)
+++|||+|.+|+..+..|.+. +++-+.|++|+++++++++++++. ..++++.+.+.. .|+|+.+||...+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~~ka~~la~~~~~----~~~~~~~~~~~~--aDiVInatp~gm~p~~ 182 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTIERAKALDFPVKI----FSLDQLDEVVKK--AKSLFNTTSVGMKGEE 182 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCHHHHHTCCSSCEE----EEGGGHHHHHHT--CSEEEECSSTTTTSCC
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHccc----CCHHHHHhhhcC--CCEEEECCCCCCCCCC
Confidence 899999999999999988876 553355899999999988877652 246777777775 99999999865432
Q ss_pred -HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE-EEEeeecc
Q 018020 88 -KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ-LMDGTMWV 134 (362)
Q Consensus 88 -~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~-~~v~~~~r 134 (362)
++-...++.+. ++++ +..+ -..+++.+++.|+. ++-|....
T Consensus 183 ~~i~~~~l~~~~-~V~D--ivy~---~T~ll~~A~~~G~~~~~~Gl~ML 225 (253)
T 3u62_A 183 LPVSDDSLKNLS-LVYD--VIYF---DTPLVVKARKLGVKHIIKGNLMF 225 (253)
T ss_dssp CSCCHHHHTTCS-EEEE--CSSS---CCHHHHHHHHHTCSEEECTHHHH
T ss_pred CCCCHHHhCcCC-EEEE--eeCC---CcHHHHHHHHCCCcEEECCHHHH
Confidence 22234455554 4444 4445 35677788888887 66664443
No 172
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.95 E-value=1.7e-05 Score=72.95 Aligned_cols=94 Identities=13% Similarity=0.189 Sum_probs=64.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-C-CC----CCcccCCHHHHhcCCCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-F-PP----DAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~-~~----~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
++||+|||+|.||..++..|.+. +.+|. ++++++++++.+.++.- . .+ ++.+++|.++ +. +.|+|++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~-~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~--~aDvVil~v 88 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVI-LWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IK--KEDILVIAI 88 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CC--TTEEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hc--CCCEEEEEC
Confidence 68999999999999999988766 56654 88999999998877631 0 00 1356778888 65 489999999
Q ss_pred CCcccHHHHHHHHH-cCCeEE-EeCCCC
Q 018020 82 PTSMHVKWAISVAQ-KKKHLL-MEKPMA 107 (362)
Q Consensus 82 ~~~~h~~~~~~al~-~gk~V~-~EKP~~ 107 (362)
|+....+++. .+. .|+.|+ +-|.+.
T Consensus 89 k~~~~~~v~~-~l~~~~~~vv~~~nGi~ 115 (335)
T 1z82_A 89 PVQYIREHLL-RLPVKPSMVLNLSKGIE 115 (335)
T ss_dssp CGGGHHHHHT-TCSSCCSEEEECCCCCC
T ss_pred CHHHHHHHHH-HhCcCCCEEEEEeCCCC
Confidence 9744444332 232 454443 444443
No 173
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.94 E-value=5.5e-06 Score=74.81 Aligned_cols=118 Identities=19% Similarity=0.202 Sum_probs=78.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCC-CCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPP-DAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
..+|+|||+|.+|+..+..|.+. ++.-+.|++|+++++++++++++... .+..++++.+.+. +.|+|+.+||...+
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~--~aDivIn~t~~~~~ 217 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST-AAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLA--EYDIIINTTSVGMH 217 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGG--GCSEEEECSCTTCS
T ss_pred CCEEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhc--cCCEEEECCCCCCC
Confidence 45899999999999999999877 56234489999999999999886310 1111234444444 59999999998765
Q ss_pred HH-----HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeee
Q 018020 87 VK-----WAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTM 132 (362)
Q Consensus 87 ~~-----~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~ 132 (362)
.. +-...++.|.. +++ +..++.+. ++++.+++.|..+..|..
T Consensus 218 ~~~~~~~i~~~~l~~~~~-v~D--~~y~P~~T-~ll~~A~~~G~~~v~Gl~ 264 (297)
T 2egg_A 218 PRVEVQPLSLERLRPGVI-VSD--IIYNPLET-KWLKEAKARGARVQNGVG 264 (297)
T ss_dssp SCCSCCSSCCTTCCTTCE-EEE--CCCSSSSC-HHHHHHHHTTCEEECSHH
T ss_pred CCCCCCCCCHHHcCCCCE-EEE--cCCCCCCC-HHHHHHHHCcCEEECCHH
Confidence 31 12234555544 444 33443333 377889999988776643
No 174
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.93 E-value=3.3e-05 Score=70.31 Aligned_cols=77 Identities=9% Similarity=0.057 Sum_probs=57.6
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH----------cCCCCC----------CcccCCH
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA----------NNFPPD----------AKVYGSY 65 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~----------~~~~~~----------~~~~~~~ 65 (362)
++..||+|||+|.||...+..+.+. +++|+ ++|+++++++++.+. .|.-++ ....+|+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~ 81 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASG-GFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNL 81 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-TCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCH
Confidence 3457899999999999999988776 67755 789999988776432 342221 2467899
Q ss_pred HHHhcCCCCcEEEEcCCCccc
Q 018020 66 EALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 66 ~e~l~~~~~D~V~i~~~~~~h 86 (362)
++.+++ .|+|+.++|....
T Consensus 82 ~eav~~--aDlVieavpe~~~ 100 (319)
T 2dpo_A 82 AEAVEG--VVHIQECVPENLD 100 (319)
T ss_dssp HHHTTT--EEEEEECCCSCHH
T ss_pred HHHHhc--CCEEEEeccCCHH
Confidence 998885 9999999998653
No 175
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.93 E-value=2e-05 Score=67.28 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=59.2
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC--C-CCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF--P-PDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~--~-~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|||+||| +|.||..++..+.+. +.+++ ++|+++++.+.+.++++. + .+.. .++++++++. +|+|++++|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~D~Vi~~~~~~ 75 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL-GHEIV-VGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEA--CDIAVLTIPWE 75 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT-TCEEE-EEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHH--CSEEEECSCHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhc--CCEEEEeCChh
Confidence 4799999 999999999998876 57765 689999888877765430 0 0112 4678888864 99999999987
Q ss_pred ccHHHHHH
Q 018020 85 MHVKWAIS 92 (362)
Q Consensus 85 ~h~~~~~~ 92 (362)
.+.+++..
T Consensus 76 ~~~~~~~~ 83 (212)
T 1jay_A 76 HAIDTARD 83 (212)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 76666543
No 176
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=97.93 E-value=0.00072 Score=62.73 Aligned_cols=214 Identities=11% Similarity=0.076 Sum_probs=129.9
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhc---CCC-cEEEEEE-cCCHHHHHHHHHHcCCCCCCcccCC----------------
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITL---APN-AVLSAVA-SRSLEKATNFAKANNFPPDAKVYGS---------------- 64 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~---~~~-~~vv~v~-d~~~~~~~~~~~~~~~~~~~~~~~~---------------- 64 (362)
++-||.|+|. |+||..-+..+++ +|+ ++|+|+. .++.+.+.+.+++|+.. ..+..|
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~--~v~v~d~~~~~~L~~~l~~~~~ 153 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPE--YLCIHDKSVYEELKELVKNIKD 153 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCS--EEEESCGGGTHHHHTGGGGSTT
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCC--EEEEcCHHHHHHHHHHhhhhcC
Confidence 4567999995 9999999999988 554 9999965 56778888888888632 111111
Q ss_pred -----------HHHHhcCCCCcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCC-HHHHHHHHHHHHHc-CCEEEEee
Q 018020 65 -----------YEALLDDKDIDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALN-VAEFDVILNACEEN-GVQLMDGT 131 (362)
Q Consensus 65 -----------~~e~l~~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~-~~~~~~l~~~a~~~-~~~~~v~~ 131 (362)
+.++...+++|.|+.+..-..-..-..+|+++||.|.+--- .+ +....=+.++++++ |..+..
T Consensus 154 ~~~~v~~G~egl~e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IALANK--ESLV~aG~Lv~~~a~~~~g~~IlP-- 229 (488)
T 3au8_A 154 YKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANK--ESIVSAGFFLKKLLNIHKNAKIIP-- 229 (488)
T ss_dssp CCCEEEEHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCS--HHHHHHHHHHHHHHHHSTTCEEEE--
T ss_pred CCceEEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCcEEEecc--hhhhhchHHHHHHHHhcCCCeEEE--
Confidence 22344456799999999999999999999999999997322 12 44555567778888 887763
Q ss_pred ecccChhHHHHHHhhcCCC-------------CccceEEEEEEeeecCCcccc----c----CccCcCCCCCCC-ccccc
Q 018020 132 MWVHNPRTAQMKEFVSDPQ-------------RFGQLRTMHSCFSFAGDAEFL----K----NDIRVKPDLDGL-GALGD 189 (362)
Q Consensus 132 ~~r~~p~~~~~k~~i~~~g-------------~iG~i~~i~~~~~~~~~~~~~----~----~~w~~~~~~~gg-g~l~~ 189 (362)
-+.....+-|++ ..+ ...+|..+-..-+..+...+. . ..=-.+|.++.| .+-.|
T Consensus 230 ---VDSEHsAIFQcL-~g~~~~~~~~~~~~~~~~~~V~kIiLTASGGPFR~~~~eeL~~VTpeqALkHPnWsMG~KITID 305 (488)
T 3au8_A 230 ---VDSEHSAIFQCL-DNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITID 305 (488)
T ss_dssp ---CSHHHHHHHHHS-CHHHHTTSCTTCTTHHHHTTEEEEEEEECCCTTTTCCHHHHTTCCTTTC---------CHHHHH
T ss_pred ---echhHHHHHHHh-cCCcccccccccccccccccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCceeeee
Confidence 355556666666 322 123466666554433211110 0 000001111111 11111
Q ss_pred cc---chHHHH--HHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcE
Q 018020 190 AG---WYGIRS--ILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRV 238 (362)
Q Consensus 190 ~g---~h~id~--~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~ 238 (362)
-. --.+.+ ..||||. +++++.....+ ....+.+++|.||.+
T Consensus 306 SATMmNKGLEvIEA~~LF~v-~~d~IeVvVHP-------QSIIHSmVef~DGSv 351 (488)
T 3au8_A 306 SATMMNKGLEVIETHFLFDV-DYNDIEVIVHK-------ECIIHSCVEFIDKSV 351 (488)
T ss_dssp HHSSHHHHHHHHHHHHHHTC-CGGGEEEEECT-------TCCEEEEEEETTSCE
T ss_pred hHhHhhhhHHHhHHHHHcCC-CHHHeEEEECC-------CCceeEEEEEeCCcE
Confidence 11 012333 5899995 46777777432 225688999999976
No 177
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.90 E-value=2.8e-05 Score=71.88 Aligned_cols=84 Identities=11% Similarity=0.173 Sum_probs=59.5
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCC------CcEEEEEEcCCHH-----HHHHHHHHc-------C--CCCCCcccCCHH
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAP------NAVLSAVASRSLE-----KATNFAKAN-------N--FPPDAKVYGSYE 66 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~------~~~vv~v~d~~~~-----~~~~~~~~~-------~--~~~~~~~~~~~~ 66 (362)
.++||+|||+|.||..++..|.+.. ..+| .++|++++ +.+.+.+.. + ++.++...+|++
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRV-TMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEE-EEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeE-EEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 3689999999999999988886542 1454 57889887 777776532 1 112234567888
Q ss_pred HHhcCCCCcEEEEcCCCcccHHHHHHH
Q 018020 67 ALLDDKDIDAVYLPLPTSMHVKWAISV 93 (362)
Q Consensus 67 e~l~~~~~D~V~i~~~~~~h~~~~~~a 93 (362)
+.+.+ .|+|++++|+....+++...
T Consensus 86 ~~~~~--aD~Vilav~~~~~~~v~~~i 110 (354)
T 1x0v_A 86 QAAED--ADILIFVVPHQFIGKICDQL 110 (354)
T ss_dssp HHHTT--CSEEEECCCGGGHHHHHHHH
T ss_pred HHHcC--CCEEEEeCCHHHHHHHHHHH
Confidence 88874 99999999986655555443
No 178
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.89 E-value=1.6e-05 Score=72.64 Aligned_cols=92 Identities=11% Similarity=0.139 Sum_probs=67.2
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCC--HHHHHHHHHHc----CCCCCCcccC--CHHHHhcCCCCcEEE
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRS--LEKATNFAKAN----NFPPDAKVYG--SYEALLDDKDIDAVY 78 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~--~~~~~~~~~~~----~~~~~~~~~~--~~~e~l~~~~~D~V~ 78 (362)
++||+|+|+ |.+|...++.|.++|++++++++++. +...+.+.+.+ +. .+..+.+ +.+++++ ++|+|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~-~~~~v~~~~~~~~~~~--~~Dvvf 80 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGI-VELPLQPMSDISEFSP--GVDVVF 80 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTT-CCCBEEEESSGGGTCT--TCSEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCc-cceeEeccCCHHHHhc--CCCEEE
Confidence 589999995 99999999999999999999998765 12233343332 11 0112222 4444443 699999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEEE
Q 018020 79 LPLPTSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 79 i~~~~~~h~~~~~~al~~gk~V~~ 102 (362)
.|+|...-.+++..++++|..|+-
T Consensus 81 ~a~p~~~s~~~~~~~~~~g~~vID 104 (337)
T 3dr3_A 81 LATAHEVSHDLAPQFLEAGCVVFD 104 (337)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCChHHHHHHHHHHHHCCCEEEE
Confidence 999999999999999999977653
No 179
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.87 E-value=1.2e-05 Score=74.65 Aligned_cols=93 Identities=14% Similarity=0.257 Sum_probs=65.3
Q ss_pred CceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC------C---CCCcccCCHHH--HhcCCC
Q 018020 6 QAAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF------P---PDAKVYGSYEA--LLDDKD 73 (362)
Q Consensus 6 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~------~---~~~~~~~~~~e--~l~~~~ 73 (362)
|+++|||||| +|..|..+++.|.++|.++|+.++.......+.+.+.+.. | .+ ..+.+.++ .++ +
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~-~~v~~~~~~~~~~--~ 93 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQD-IVVQECKPEGNFL--E 93 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHT-CBCEESSSCTTGG--G
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhccccccccccccccc-ceEEeCchhhhcc--c
Confidence 5689999999 5889999999999999999998864333333444433210 0 00 11222221 233 5
Q ss_pred CcEEEEcCCCcccHHHHHHHHHcCCeEE
Q 018020 74 IDAVYLPLPTSMHVKWAISVAQKKKHLL 101 (362)
Q Consensus 74 ~D~V~i~~~~~~h~~~~~~al~~gk~V~ 101 (362)
+|+|+.|+|.....+++..++++|..|+
T Consensus 94 ~Dvvf~alp~~~s~~~~~~~~~~G~~VI 121 (381)
T 3hsk_A 94 CDVVFSGLDADVAGDIEKSFVEAGLAVV 121 (381)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCChhHHHHHHHHHHhCCCEEE
Confidence 9999999999999999999999997766
No 180
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.84 E-value=4.1e-05 Score=69.31 Aligned_cols=82 Identities=11% Similarity=0.111 Sum_probs=56.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCC---------CCcccCCHHHHhcC-CCCcEE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPP---------DAKVYGSYEALLDD-KDIDAV 77 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~---------~~~~~~~~~e~l~~-~~~D~V 77 (362)
+|||+|||+|.||..++..|.+. +.+|+ ++|+++++.+.+.+. |+.. .+. ..+.+++.+. .+.|+|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG-GNDVT-LIDQWPAHIEAIRKN-GLIADFNGEEVVANLP-IFSPEEIDHQNEQVDLI 78 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHH-CEEEEETTEEEEECCC-EECGGGCCTTSCCCSEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-CCcEE-EEECCHHHHHHHHhC-CEEEEeCCCeeEecce-eecchhhcccCCCCCEE
Confidence 57999999999999999998776 56755 789999988888765 3210 001 1133444331 269999
Q ss_pred EEcCCCcccHHHHHHH
Q 018020 78 YLPLPTSMHVKWAISV 93 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~a 93 (362)
++++|+....+++...
T Consensus 79 i~~v~~~~~~~v~~~l 94 (316)
T 2ew2_A 79 IALTKAQQLDAMFKAI 94 (316)
T ss_dssp EECSCHHHHHHHHHHH
T ss_pred EEEeccccHHHHHHHH
Confidence 9999987666555443
No 181
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.83 E-value=2.3e-05 Score=69.64 Aligned_cols=112 Identities=12% Similarity=0.151 Sum_probs=79.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
-++.|||+|.+|+..+..+... ++.-+.|++|+.+++++++++++.+ +..++. ..+.|+|+.+||...+..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt~~ka~~la~~~~~~----~~~~~~----~~~~DivInaTp~gm~~~ 190 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLAALYGYA----YINSLE----NQQADILVNVTSIGMKGG 190 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHHHHHTCE----EESCCT----TCCCSEEEECSSTTCTTS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCc----cchhhh----cccCCEEEECCCCCccCc
Confidence 4799999999999999888877 5533558999999999999988631 222222 236999999999876531
Q ss_pred -------HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeec
Q 018020 89 -------WAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMW 133 (362)
Q Consensus 89 -------~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 133 (362)
+-...+..+..| ++ +..++.+. .+++.|++.|..+.-|...
T Consensus 191 ~~~~~~~~~~~~l~~~~~v-~D--lvY~P~~T-~ll~~A~~~G~~~i~Gl~M 238 (271)
T 1npy_A 191 KEEMDLAFPKAFIDNASVA-FD--VVAMPVET-PFIRYAQARGKQTISGAAV 238 (271)
T ss_dssp TTTTSCSSCHHHHHHCSEE-EE--CCCSSSSC-HHHHHHHHTTCEEECHHHH
T ss_pred cccCCCCCCHHHcCCCCEE-EE--eecCCCCC-HHHHHHHHCCCEEECCHHH
Confidence 234566666544 44 44444444 7888899999887666444
No 182
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=97.81 E-value=9.8e-05 Score=67.33 Aligned_cols=100 Identities=19% Similarity=0.119 Sum_probs=69.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcC--CCcEEEEEEcC-CHHHHHHHHHH---cCCCCC----------------Cccc--C
Q 018020 8 AIRFGIIGAADIARKLSRAITLA--PNAVLSAVASR-SLEKATNFAKA---NNFPPD----------------AKVY--G 63 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~--~~~~vv~v~d~-~~~~~~~~~~~---~~~~~~----------------~~~~--~ 63 (362)
++||||+|+|.+|+..++.+.++ |.++|++|.|. +.+....+.+- +|...+ ..++ .
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 47999999999999999999888 99999999986 33333333221 111100 0011 2
Q ss_pred CHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCCC
Q 018020 64 SYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPMA 107 (362)
Q Consensus 64 ~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~~ 107 (362)
+.+++ ..+.++|+|+-|||.....+.+...+++| |-|.+--|+.
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r 126 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGK 126 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCccc
Confidence 33332 22226999999999999999999999999 6666666653
No 183
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.79 E-value=5.6e-05 Score=69.21 Aligned_cols=81 Identities=14% Similarity=0.178 Sum_probs=58.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHHcC-CC-----CCCcccC--CHHHHhcCCCCcEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKANN-FP-----PDAKVYG--SYEALLDDKDIDAVY 78 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~~~-~~-----~~~~~~~--~~~e~l~~~~~D~V~ 78 (362)
|||+|||+|.||..++..|.+. +.+|+ ++|+ ++++.+.+.+..- +. ....+.+ ++++.+.. .|+|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~D~vi 76 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN-GNEVR-IWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN--AEVVL 76 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-CCEEE-EECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT--CSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEE-EEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhc--CCEEE
Confidence 4799999999999999988765 45655 7899 8888887765431 00 0013445 77777764 99999
Q ss_pred EcCCCcccHHHHHHH
Q 018020 79 LPLPTSMHVKWAISV 93 (362)
Q Consensus 79 i~~~~~~h~~~~~~a 93 (362)
+++|+..+.+++...
T Consensus 77 ~~v~~~~~~~v~~~i 91 (335)
T 1txg_A 77 LGVSTDGVLPVMSRI 91 (335)
T ss_dssp ECSCGGGHHHHHHHH
T ss_pred EcCChHHHHHHHHHH
Confidence 999998776666543
No 184
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.78 E-value=6e-05 Score=66.63 Aligned_cols=111 Identities=16% Similarity=0.149 Sum_probs=77.8
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH-
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV- 87 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~- 87 (362)
-|+.|||+|.+|+..+..|.+.. .+| .|++|+.+++++++ ++++. .. +++++ . +.|+|+.+||...+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v-~V~nRt~~ka~~la-~~~~~----~~-~~~~l-~--~~DiVInaTp~Gm~~~ 187 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQV-SVLNRSSRGLDFFQ-RLGCD----CF-MEPPK-S--AFDLIINATSASLHNE 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEE-EEECSSCTTHHHHH-HHTCE----EE-SSCCS-S--CCSEEEECCTTCCCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEE-EEEeCCHHHHHHHH-HCCCe----Ee-cHHHh-c--cCCEEEEcccCCCCCC
Confidence 47999999999999999998885 665 48999999999999 77742 21 33333 2 699999999976542
Q ss_pred -----HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeeccc
Q 018020 88 -----KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVH 135 (362)
Q Consensus 88 -----~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~ 135 (362)
+.+...++.+ .+++| +..++ -..+++.|++.|+...-|.....
T Consensus 188 ~~l~~~~l~~~l~~~-~~v~D--~vY~P--~T~ll~~A~~~G~~~~~Gl~MLv 235 (269)
T 3phh_A 188 LPLNKEVLKGYFKEG-KLAYD--LAYGF--LTPFLSLAKELKTPFQDGKDMLI 235 (269)
T ss_dssp CSSCHHHHHHHHHHC-SEEEE--SCCSS--CCHHHHHHHHTTCCEECSHHHHH
T ss_pred CCCChHHHHhhCCCC-CEEEE--eCCCC--chHHHHHHHHCcCEEECCHHHHH
Confidence 2223356655 45555 34444 23388889999988877654443
No 185
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=97.78 E-value=2e-05 Score=75.46 Aligned_cols=109 Identities=14% Similarity=0.196 Sum_probs=81.1
Q ss_pred ceeEEEEEecc----HHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 7 AAIRFGIIGAA----DIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 7 ~~~~v~iiG~G----~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
++-+|+|||++ .+|..++..+++.+... +..+++... +-.|+ .+|.|++++.+ .+|+++|++|
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~-v~pVnP~~~------~i~G~----~~y~sl~~lp~--~~Dlavi~vp 73 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGK-VYPVNIKEE------EVQGV----KAYKSVKDIPD--EIDLAIIVVP 73 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSE-EEEECSSCS------EETTE----ECBSSTTSCSS--CCSEEEECSC
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHcCCCE-EEEECCCCC------eECCE----eccCCHHHcCC--CCCEEEEecC
Confidence 46789999997 67999999998775333 445555421 12354 69999999876 5999999999
Q ss_pred CcccHHHHHHHHHcCCeEEEeCCCCCC--H----HHHHHHHHHHHHcCCEEE
Q 018020 83 TSMHVKWAISVAQKKKHLLMEKPMALN--V----AEFDVILNACEENGVQLM 128 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~EKP~~~~--~----~~~~~l~~~a~~~~~~~~ 128 (362)
+..+.+++.+|+++|.+.++-.+-... - +..+++.+.++++|+.+.
T Consensus 74 ~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~vi 125 (457)
T 2csu_A 74 KRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRII 125 (457)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEE
Confidence 999999999999999654443332221 1 236889999999998876
No 186
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=97.78 E-value=3e-05 Score=70.80 Aligned_cols=120 Identities=15% Similarity=0.093 Sum_probs=89.4
Q ss_pred eeEEEEEeccHHHHH---HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARK---LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~---~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
+-|+.|.+.|.++.. .+..+.+.++.++||++|.+ ...+.+.+-.|++.++.++.|++++++. ++|++++.+.|.
T Consensus 7 ~~~~vi~~~g~~~~~~aKta~gl~r~~~~~iVgvid~~-~~G~d~ge~~g~~~gipi~~~l~~al~~-~~d~lvig~a~~ 84 (349)
T 2obn_A 7 NQRVAILLHEGTTGTIGKTGLALLRYSEAPIVAVIDRN-CAGQSLREITGIYRYVPIVKSVEAALEY-KPQVLVIGIAPK 84 (349)
T ss_dssp CCCEEEECTTTSSSSSCHHHHHHHHHCCSCEEEEECGG-GTTSCHHHHHCCCSCCCEESSHHHHGGG-CCSEEEECCCCC
T ss_pred CCcEEEEeCCCCCcHHHHHhHHhhhcCCCcEEEEEeCC-CCCCcHHHhcCCcCCCCccCCHHHHHhC-CCCEEEEEecCC
Confidence 457899999988763 34445666679999999976 3334445555666667789999999964 799999997433
Q ss_pred ------ccHHHHHHHHHcCCeEE--EeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccCh
Q 018020 85 ------MHVKWAISVAQKKKHLL--MEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNP 137 (362)
Q Consensus 85 ------~h~~~~~~al~~gk~V~--~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p 137 (362)
.=.+.+.+|+++|++|. ++-|++.+.+ +.++|++ |+.++.- |..|
T Consensus 85 gG~l~~~~~~~i~~Al~~G~~Vvsglh~~l~~~pe----l~~~A~~-g~~i~dv---r~pp 137 (349)
T 2obn_A 85 GGGIPDDYWIELKTALQAGMSLVNGLHTPLANIPD----LNALLQP-GQLIWDV---RKEP 137 (349)
T ss_dssp CC-SCGGGHHHHHHHHHTTCEEEECSSSCCTTCHH----HHHHCCT-TCCEEET---TCCC
T ss_pred CCCCCHHHHHHHHHHHHcCCcEEeCccchhhCCHH----HHHHHHc-CCEEEEe---ccCc
Confidence 33589999999999997 5557777766 7788888 9888753 5555
No 187
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=97.76 E-value=0.00012 Score=68.94 Aligned_cols=71 Identities=14% Similarity=0.221 Sum_probs=54.2
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC--------------CCCcccCCHHHHhcCCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP--------------PDAKVYGSYEALLDDKDI 74 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~--------------~~~~~~~~~~e~l~~~~~ 74 (362)
|||+|||+|.||..++..|.+ +.+|+ ++|+++++.+.+.+.. .+ ......+++.+.++. .
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G~~V~-~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~--a 74 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--QNEVT-IVDILPSKVDKINNGL-SPIQDEYIEYYLKSKQLSIKATLDSKAAYKE--A 74 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEE-EECSCHHHHHHHHTTC-CSSCCHHHHHHHHHSCCCEEEESCHHHHHHH--C
T ss_pred CEEEEECCCHHHHHHHHHHhC--CCEEE-EEECCHHHHHHHHcCC-CCcCCCCHHHHHHhccCcEEEeCCHHHHhcC--C
Confidence 489999999999999998876 57765 6899999888875432 21 012445677777764 8
Q ss_pred cEEEEcCCCcc
Q 018020 75 DAVYLPLPTSM 85 (362)
Q Consensus 75 D~V~i~~~~~~ 85 (362)
|+|++++|+..
T Consensus 75 Dvviiavpt~~ 85 (402)
T 1dlj_A 75 ELVIIATPTNY 85 (402)
T ss_dssp SEEEECCCCCE
T ss_pred CEEEEecCCCc
Confidence 99999999985
No 188
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.75 E-value=0.00016 Score=61.96 Aligned_cols=107 Identities=18% Similarity=0.223 Sum_probs=73.0
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc--CCCCcEEEEcCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD--DKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~--~~~~D~V~i~~~~ 83 (362)
|||.|+|+|.+|...+..|.+. +.+++ ++|+++++.+.++++.+.. .++ ++.+.+-+ -.+.|+|++++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~-vid~~~~~~~~l~~~~~~~---~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVV-IINKDRELCEEFAKKLKAT---IIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEE-EEESCHHHHHHHHHHSSSE---EEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEE-EEECCHHHHHHHHHHcCCe---EEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 5799999999999999999876 66766 6789999999888776643 222 23332321 2479999999999
Q ss_pred cccHHHHHHHHHc--C-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Q 018020 84 SMHVKWAISVAQK--K-KHLLMEKPMALNVAEFDVILNACEENGVQL 127 (362)
Q Consensus 84 ~~h~~~~~~al~~--g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~ 127 (362)
+.-...+...++. + ++|++ .+.+.+..+.+ ++.|...
T Consensus 76 d~~n~~~~~~a~~~~~~~~iia---~~~~~~~~~~l----~~~G~d~ 115 (218)
T 3l4b_C 76 DEVNLFIAQLVMKDFGVKRVVS---LVNDPGNMEIF----KKMGITT 115 (218)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEE---CCCSGGGHHHH----HHHTCEE
T ss_pred cHHHHHHHHHHHHHcCCCeEEE---EEeCcchHHHH----HHCCCCE
Confidence 8766666655543 4 56776 34455554433 5566654
No 189
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.70 E-value=0.00023 Score=67.05 Aligned_cols=90 Identities=16% Similarity=0.225 Sum_probs=66.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
..+|+|||+|.+|...+..++.. ++ +| .++|+++++++.+++++|.. +..++++.+++. +.|+|+.+||...+
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G~~~V-~v~~r~~~ra~~la~~~g~~--~~~~~~l~~~l~--~aDvVi~at~~~~~ 240 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-GVRAV-LVANRTYERAVELARDLGGE--AVRFDELVDHLA--RSDVVVSATAAPHP 240 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-CCSEE-EEECSSHHHHHHHHHHHTCE--ECCGGGHHHHHH--TCSEEEECCSSSSC
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-CCCEE-EEEeCCHHHHHHHHHHcCCc--eecHHhHHHHhc--CCCEEEEccCCCCc
Confidence 46899999999999999988876 56 54 48899999988888888742 112467788876 49999999987665
Q ss_pred H---HHHHH-HHHc---CCeEEEe
Q 018020 87 V---KWAIS-VAQK---KKHLLME 103 (362)
Q Consensus 87 ~---~~~~~-al~~---gk~V~~E 103 (362)
. +.+.. +++. |.-+++.
T Consensus 241 ~~~~~~l~~~~lk~r~~~~~v~vd 264 (404)
T 1gpj_A 241 VIHVDDVREALRKRDRRSPILIID 264 (404)
T ss_dssp CBCHHHHHHHHHHCSSCCCEEEEE
T ss_pred eecHHHHHHHHHhccCCCCEEEEE
Confidence 3 44444 4542 4556654
No 190
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.70 E-value=3.8e-05 Score=71.67 Aligned_cols=82 Identities=12% Similarity=0.212 Sum_probs=57.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCC------CcEEEEEEcCCHH-----HHHHHHHHc-------C--CCCCCcccCCHHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAP------NAVLSAVASRSLE-----KATNFAKAN-------N--FPPDAKVYGSYEA 67 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~------~~~vv~v~d~~~~-----~~~~~~~~~-------~--~~~~~~~~~~~~e 67 (362)
++||+|||+|.||..++..|.+.. ..+| .++|++++ +++.+.+.. + ++.++...+|+++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEV-RMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCE-EEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeE-EEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 468999999999999888876542 1454 47888887 777776532 1 1123456678888
Q ss_pred HhcCCCCcEEEEcCCCcccHHHHHH
Q 018020 68 LLDDKDIDAVYLPLPTSMHVKWAIS 92 (362)
Q Consensus 68 ~l~~~~~D~V~i~~~~~~h~~~~~~ 92 (362)
.+.+ .|+|++++|+....+++..
T Consensus 100 a~~~--aDvVilav~~~~~~~vl~~ 122 (375)
T 1yj8_A 100 VIND--ADLLIFIVPCQYLESVLAS 122 (375)
T ss_dssp HHTT--CSEEEECCCHHHHHHHHHH
T ss_pred HHcC--CCEEEEcCCHHHHHHHHHH
Confidence 8875 8999999998655555443
No 191
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.69 E-value=7.8e-05 Score=67.64 Aligned_cols=82 Identities=10% Similarity=0.085 Sum_probs=56.0
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCC----C-cEEEEEEcCCHHHHHHHHHHcCCCC----------CCcccCCHHHHhcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAP----N-AVLSAVASRSLEKATNFAKANNFPP----------DAKVYGSYEALLDD 71 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~----~-~~vv~v~d~~~~~~~~~~~~~~~~~----------~~~~~~~~~e~l~~ 71 (362)
.+|||+|||+|.||..++..|.+.+ + .+|+ ++++ +++.+.+.++.|+.. .+.+.++.+ .+.
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~- 82 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVS-WIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPA-EVG- 82 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEE-EECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHH-HHC-
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEE-EEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCcc-ccC-
Confidence 3589999999999999988887651 4 6655 6788 777888776345320 011124444 344
Q ss_pred CCCcEEEEcCCCcccHHHHHHH
Q 018020 72 KDIDAVYLPLPTSMHVKWAISV 93 (362)
Q Consensus 72 ~~~D~V~i~~~~~~h~~~~~~a 93 (362)
+.|+|++++|+....+.+...
T Consensus 83 -~~D~vil~vk~~~~~~v~~~i 103 (317)
T 2qyt_A 83 -TVDYILFCTKDYDMERGVAEI 103 (317)
T ss_dssp -CEEEEEECCSSSCHHHHHHHH
T ss_pred -CCCEEEEecCcccHHHHHHHH
Confidence 599999999998876655443
No 192
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.68 E-value=5.3e-05 Score=58.60 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=76.0
Q ss_pred eeEEEEEecc----HHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGAA----DIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~G----~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+-+|+|||+. ..|...+..|++. +++|.. +++..+ +-.| .++|.|+.++-+ +|+|+|++|+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~-g~~V~p-VnP~~~------~i~G----~~~y~sl~dlp~---vDlavi~~p~ 68 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH-GHEFIP-VGRKKG------EVLG----KTIINERPVIEG---VDTVTLYINP 68 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH-TCCEEE-ESSSCS------EETT----EECBCSCCCCTT---CCEEEECSCH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC-CCeEEE-ECCCCC------cCCC----eeccCChHHCCC---CCEEEEEeCH
Confidence 5579999984 4677888888876 567554 344321 1124 368999888753 9999999999
Q ss_pred cccHHHHHHHHHcC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 84 SMHVKWAISVAQKK-KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 84 ~~h~~~~~~al~~g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
..-.+++.+|.+.| |.|++. |-..+ +++.+.|+++|+.+.
T Consensus 69 ~~v~~~v~e~~~~g~k~v~~~-~G~~~----~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKRVIFN-PGTEN----EELEEILSENGIEPV 109 (122)
T ss_dssp HHHGGGHHHHHHHCCSEEEEC-TTCCC----HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEC-CCCCh----HHHHHHHHHcCCeEE
Confidence 99999999999999 666654 43332 589999999999877
No 193
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.68 E-value=0.00023 Score=64.19 Aligned_cols=74 Identities=8% Similarity=0.151 Sum_probs=54.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH----------HcCCCC--------------CCcccC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK----------ANNFPP--------------DAKVYG 63 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~----------~~~~~~--------------~~~~~~ 63 (362)
..||+|||+|.||...+..+.+. +++|+ ++|+++++++...+ +.|.-. .+...+
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G~~V~-~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 92 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-GHTVV-LVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST 92 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEec
Confidence 45899999999999999888776 67765 89999987765422 122100 123567
Q ss_pred CHHHHhcCCCCcEEEEcCCCcc
Q 018020 64 SYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 64 ~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
|+++.+++ .|+|++++|...
T Consensus 93 ~~~~~~~~--aD~Vi~avp~~~ 112 (302)
T 1f0y_A 93 DAASVVHS--TDLVVEAIVENL 112 (302)
T ss_dssp CHHHHTTS--CSEEEECCCSCH
T ss_pred CHHHhhcC--CCEEEEcCcCcH
Confidence 88887775 999999999875
No 194
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.67 E-value=0.00012 Score=67.56 Aligned_cols=107 Identities=10% Similarity=0.026 Sum_probs=74.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc-cc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS-MH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~-~h 86 (362)
-.+|+|+|+|.+|...+..+.+. +++|+ ++|++++++++++++++. . +.+.++++. .++|+++.|...+ ..
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~-GakVv-v~D~~~~~l~~~a~~~ga----~-~v~~~~ll~-~~~DIvip~a~~~~I~ 244 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTE-GAKLV-VTDVNKAAVSAAVAEEGA----D-AVAPNAIYG-VTCDIFAPCALGAVLN 244 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHHHCC----E-ECCGGGTTT-CCCSEEEECSCSCCBS
T ss_pred cCEEEEECchHHHHHHHHHHHHC-CCEEE-EEcCCHHHHHHHHHHcCC----E-EEChHHHhc-cCCcEeeccchHHHhC
Confidence 46799999999999999999888 78888 999999999999998873 2 346677776 3799999875443 33
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCC-HHHHHHHHHHHHHcCCEEE
Q 018020 87 VKWAISVAQKKKHLLMEKPMALN-VAEFDVILNACEENGVQLM 128 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~-~~~~~~l~~~a~~~~~~~~ 128 (362)
.+.+ ..+ |..+++|.--... .++ ..+..++.|+.+.
T Consensus 245 ~~~~-~~l--g~~iV~e~An~p~t~~e---a~~~L~~~Gi~~~ 281 (364)
T 1leh_A 245 DFTI-PQL--KAKVIAGSADNQLKDPR---HGKYLHELGIVYA 281 (364)
T ss_dssp TTHH-HHC--CCSEECCSCSCCBSSHH---HHHHHHHHTCEEC
T ss_pred HHHH-HhC--CCcEEEeCCCCCcccHH---HHHHHHhCCCEEe
Confidence 3332 222 6678888632222 123 3455666776544
No 195
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=97.66 E-value=0.00034 Score=63.64 Aligned_cols=120 Identities=7% Similarity=0.079 Sum_probs=84.7
Q ss_pred CceeEEEEEec-cHHHHHHHHH--HhcCCCcEEEEEEcCCHHH-HHHHHHHcCCC-CCCcccCCHHHHhcC-CCCcEEEE
Q 018020 6 QAAIRFGIIGA-ADIARKLSRA--ITLAPNAVLSAVASRSLEK-ATNFAKANNFP-PDAKVYGSYEALLDD-KDIDAVYL 79 (362)
Q Consensus 6 ~~~~~v~iiG~-G~~g~~~~~~--~~~~~~~~vv~v~d~~~~~-~~~~~~~~~~~-~~~~~~~~~~e~l~~-~~~D~V~i 79 (362)
.+.+||.+-|+ |.+++..+.. +.+.++.++++.+++...- -+++ .+|.+ .+..+|.|++|+++. +++|+++|
T Consensus 8 ~~~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v--~~G~~~~Gvpvy~sv~ea~~~~p~~DlaVi 85 (334)
T 3mwd_B 8 SRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKF--YWGHKEILIPVFKNMADAMRKHPEVDVLIN 85 (334)
T ss_dssp CTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEE--EETTEEEEEEEESSHHHHHHHCTTCCEEEE
T ss_pred CCCCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccceE--eccCccCCceeeCCHHHHhhcCCCCcEEEE
Confidence 35789999998 5555555444 4455679999999986420 0111 01211 123599999999865 36999999
Q ss_pred cCCCcccHHHHHHHHH-cC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 80 PLPTSMHVKWAISVAQ-KK-KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~-~g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
++|+..-...+.+++. +| +.|+|=.. ..+.++.++|.+.|+++|+.++
T Consensus 86 ~vp~~~a~~ai~ea~~~~Gv~~vViiT~-G~~e~~~~~l~~~a~~~g~rli 135 (334)
T 3mwd_B 86 FASLRSAYDSTMETMNYAQIRTIAIIAE-GIPEALTRKLIKKADQKGVTII 135 (334)
T ss_dssp CCCTTTHHHHHHHHTTSTTCCEEEECCS-CCCHHHHHHHHHHHHHHTCEEE
T ss_pred ecCHHHHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHcCCEEE
Confidence 9999998888888887 88 56776221 4456788999999999998654
No 196
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.64 E-value=0.00036 Score=55.24 Aligned_cols=119 Identities=14% Similarity=0.166 Sum_probs=76.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCH--HHHhc---CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSY--EALLD---DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~--~e~l~---~~~~D~V~i~~~ 82 (362)
+-+|.|+|+|.+|...+..|.+. +.+++ ++|+++++.+.+.+ .|++ .++.|. .+.|. -.+.|+|++++|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~-vid~~~~~~~~~~~-~g~~---~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLV-VIETSRTRVDELRE-RGVR---AVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEE-EEESCHHHHHHHHH-TTCE---EEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEE-EEECCHHHHHHHHH-cCCC---EEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 46799999999999999999876 67766 77899998887765 5553 233222 23332 246899999999
Q ss_pred CcccHHHHHHHH-Hc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHh
Q 018020 83 TSMHVKWAISVA-QK--KKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEF 145 (362)
Q Consensus 83 ~~~h~~~~~~al-~~--gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~ 145 (362)
++.....+...+ +. +.+|++ .+.+.+..+.+ ++.|+...+ .|.....+++
T Consensus 81 ~~~~n~~~~~~a~~~~~~~~iia---r~~~~~~~~~l----~~~G~d~vi------~p~~~~a~~i 133 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPDIEIIA---RAHYDDEVAYI----TERGANQVV------MGEREIARTM 133 (140)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEE---EESSHHHHHHH----HHTTCSEEE------EHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCCCeEEE---EECCHHHHHHH----HHCCCCEEE------CchHHHHHHH
Confidence 986654333333 32 467776 34566665433 456765544 4554444443
No 197
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.64 E-value=0.00018 Score=64.68 Aligned_cols=116 Identities=14% Similarity=0.251 Sum_probs=76.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
..+|+|||+|.+|...+..++.. +++|+ ++|+++++.+.+. ++|.. ..-+.++++++.. .|+|++++|...-.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~-~~dr~~~~~~~~~-~~g~~--~~~~~~l~~~l~~--aDvVi~~~p~~~i~ 227 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-GAKVK-VGARESDLLARIA-EMGME--PFHISKAAQELRD--VDVCINTIPALVVT 227 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESSHHHHHHHH-HTTSE--EEEGGGHHHHTTT--CSEEEECCSSCCBC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHH-HCCCe--ecChhhHHHHhcC--CCEEEECCChHHhC
Confidence 46899999999999999999877 57755 7899987766543 56642 1113678888874 99999999986544
Q ss_pred HHHHHHHHcCCeEEEe---CCCCCCHHHHHHHHHHHHHcCCEEE--EeeecccChh
Q 018020 88 KWAISVAQKKKHLLME---KPMALNVAEFDVILNACEENGVQLM--DGTMWVHNPR 138 (362)
Q Consensus 88 ~~~~~al~~gk~V~~E---KP~~~~~~~~~~l~~~a~~~~~~~~--v~~~~r~~p~ 138 (362)
+-....++.|. +++. .|...+. +.+++.|+.+. .+..-...|.
T Consensus 228 ~~~l~~mk~~~-~lin~ar~~~~~~~-------~~a~~~Gv~~~~~~~l~~~v~p~ 275 (293)
T 3d4o_A 228 ANVLAEMPSHT-FVIDLASKPGGTDF-------RYAEKRGIKALLVPGLPGIVAPK 275 (293)
T ss_dssp HHHHHHSCTTC-EEEECSSTTCSBCH-------HHHHHHTCEEEECCCHHHHHCHH
T ss_pred HHHHHhcCCCC-EEEEecCCCCCCCH-------HHHHHCCCEEEECCCCCcccCHH
Confidence 44455566664 4443 2332332 45567787664 4444445443
No 198
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.63 E-value=0.00023 Score=66.96 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=67.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEc---CCHHHHHHHHHHcCC------CCC--------Cc-ccCCHHHHh
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVAS---RSLEKATNFAKANNF------PPD--------AK-VYGSYEALL 69 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d---~~~~~~~~~~~~~~~------~~~--------~~-~~~~~~e~l 69 (362)
+|||+|||+|.||..++..|.+..+.+|+ +++ +++++.+.+.++.++ +++ .. +.+|+++.+
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~-~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 80 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVR-VLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI 80 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEE-EECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEE-EEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh
Confidence 47999999999999999988654467766 678 777777764443331 011 12 567888887
Q ss_pred cCCCCcEEEEcCCCcccHHHHHHHHHc-C-CeEEEeCCCCCC
Q 018020 70 DDKDIDAVYLPLPTSMHVKWAISVAQK-K-KHLLMEKPMALN 109 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~h~~~~~~al~~-g-k~V~~EKP~~~~ 109 (362)
.. .|+|++++|+..+.+++...... + ..+++-.+.+..
T Consensus 81 ~~--aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 81 SG--ADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp TT--CSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred CC--CCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 74 99999999999887766554322 1 245555554444
No 199
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.62 E-value=6.2e-05 Score=66.97 Aligned_cols=116 Identities=14% Similarity=0.158 Sum_probs=71.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
..+++|+|+|.+|+..+..+.+.. .+|+ |++|+.+++++++++++....+. ..+++++.+ .++|+|+.+||...+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G-~~v~-v~~R~~~~a~~l~~~~~~~~~~~-~~~~~~~~~-~~~DivIn~t~~~~~~ 194 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQ-QNIV-LANRTFSKTKELAERFQPYGNIQ-AVSMDSIPL-QTYDLVINATSAGLSG 194 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTT-CEEE-EEESSHHHHHHHHHHHGGGSCEE-EEEGGGCCC-SCCSEEEECCCC----
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC-CEEE-EEECCHHHHHHHHHHccccCCeE-EeeHHHhcc-CCCCEEEECCCCCCCC
Confidence 358999999999999999888874 6655 89999999999988764200111 234444322 3699999999987764
Q ss_pred HH---HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE-EEEe
Q 018020 88 KW---AISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ-LMDG 130 (362)
Q Consensus 88 ~~---~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~-~~v~ 130 (362)
.. -...++.|..|+ + +..+..+...+.+.+++.|.. ..-|
T Consensus 195 ~~~~i~~~~l~~~~~v~-D--~~y~p~~~t~ll~~a~~~G~~~~v~G 238 (272)
T 1p77_A 195 GTASVDAEILKLGSAFY-D--MQYAKGTDTPFIALCKSLGLTNVSDG 238 (272)
T ss_dssp ---CCCHHHHHHCSCEE-E--SCCCTTSCCHHHHHHHHTTCCCEECS
T ss_pred CCCCCCHHHcCCCCEEE-E--eeCCCCcCCHHHHHHHHcCCCEeeCC
Confidence 31 124455565444 3 333433312355677777776 5544
No 200
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=97.62 E-value=0.0001 Score=62.84 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=75.1
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
-||.+++|+ |.||+...... ..++++|++..|+..+ +++ + ++|+||-.|.|..-
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~~~------------------~~l----~--~~DVvIDFT~P~a~ 66 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVNGV------------------EEL----D--SPDVVIDFSSPEAL 66 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETTEE------------------EEC----S--CCSEEEECSCGGGH
T ss_pred cceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCCCc------------------ccc----c--CCCEEEECCCHHHH
Confidence 589999998 99999887655 5678999999987521 111 2 58999989999999
Q ss_pred HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeec
Q 018020 87 VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMW 133 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 133 (362)
.+.+..|+++|+++.+-.. +.+.++.+++.+++++ +.+....|+
T Consensus 67 ~~~~~~~~~~g~~~ViGTT-G~~~~~~~~l~~~a~~--~~vv~apNf 110 (228)
T 1vm6_A 67 PKTVDLCKKYRAGLVLGTT-ALKEEHLQMLRELSKE--VPVVQAYNF 110 (228)
T ss_dssp HHHHHHHHHHTCEEEECCC-SCCHHHHHHHHHHTTT--SEEEECSCC
T ss_pred HHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHHhh--CCEEEeccc
Confidence 9999999999999888554 4677887777777655 555544443
No 201
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.62 E-value=5e-05 Score=71.93 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=58.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcC-----CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLA-----PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~-----~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
.||+|||+|.||..++..|++. .+++++... +..++..+.+.+.|+........|.+|+++. .|+|++++|+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~-r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~--ADVVILaVP~ 131 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL-RKGSKSFDEARAAGFTEESGTLGDIWETVSG--SDLVLLLISD 131 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE-CTTCSCHHHHHHTTCCTTTTCEEEHHHHHHH--CSEEEECSCH
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe-CCchhhHHHHHHCCCEEecCCCCCHHHHHhc--CCEEEECCCh
Confidence 6899999999999999999875 356766444 4334445556677763100113689999886 8999999999
Q ss_pred cccHHHHHHH
Q 018020 84 SMHVKWAISV 93 (362)
Q Consensus 84 ~~h~~~~~~a 93 (362)
..+.++....
T Consensus 132 ~~~~eVl~eI 141 (525)
T 3fr7_A 132 AAQADNYEKI 141 (525)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9887766543
No 202
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.61 E-value=0.00011 Score=67.19 Aligned_cols=66 Identities=27% Similarity=0.393 Sum_probs=52.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|||||+|.||...+..++.. +++|+ ++|++++. ..+.++|+ . +.+++++++. .|+|++++|..
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~-G~~V~-~~d~~~~~--~~~~~~g~----~-~~~l~e~l~~--aDiVil~vp~~ 211 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPF-GVKLY-YWSRHRKV--NVEKELKA----R-YMDIDELLEK--SDIVILALPLT 211 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-TCEEE-EECSSCCH--HHHHHHTE----E-ECCHHHHHHH--CSEEEECCCCC
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEE-EECCCcch--hhhhhcCc----e-ecCHHHHHhh--CCEEEEcCCCC
Confidence 46899999999999999999876 67865 78888765 33445564 2 3589999875 99999999986
No 203
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.60 E-value=0.00014 Score=65.56 Aligned_cols=106 Identities=15% Similarity=0.263 Sum_probs=71.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
..+|+|||+|.+|...+..++.. +++|+ ++|+++++.+.+.+ +|.. ..-+.+++++++. .|+|++++|...-.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~-~~d~~~~~~~~~~~-~g~~--~~~~~~l~~~l~~--aDvVi~~~p~~~i~ 229 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL-GANVK-VGARSSAHLARITE-MGLV--PFHTDELKEHVKD--IDICINTIPSMILN 229 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESSHHHHHHHHH-TTCE--EEEGGGHHHHSTT--CSEEEECCSSCCBC
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHHH-CCCe--EEchhhHHHHhhC--CCEEEECCChhhhC
Confidence 46899999999999999999877 57755 78999887665543 5532 1114688888874 99999999986543
Q ss_pred HHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 88 KWAISVAQKKKHLLMEK---PMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 88 ~~~~~al~~gk~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+.....++.|. +++.- |...+. +.+++.|+.+.
T Consensus 230 ~~~~~~mk~g~-~lin~a~g~~~~~~-------~~a~~~G~~~i 265 (300)
T 2rir_A 230 QTVLSSMTPKT-LILDLASRPGGTDF-------KYAEKQGIKAL 265 (300)
T ss_dssp HHHHTTSCTTC-EEEECSSTTCSBCH-------HHHHHHTCEEE
T ss_pred HHHHHhCCCCC-EEEEEeCCCCCcCH-------HHHHHCCCEEE
Confidence 33344455553 44442 322222 45566777654
No 204
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.58 E-value=3.1e-05 Score=69.05 Aligned_cols=114 Identities=20% Similarity=0.187 Sum_probs=78.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
.-++.|||+|.+|+..+..|.+. ++.-+.|++|+.+++++++++++. . +++++-+- +.|+|+.+||...+.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~~ka~~La~~~~~----~---~~~~l~~l-~~DivInaTp~Gm~~ 192 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNPEKTSEIYGEFKV----I---SYDELSNL-KGDVIINCTPKGMYP 192 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCHHHHHHHCTTSEE----E---EHHHHTTC-CCSEEEECSSTTSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhcCc----c---cHHHHHhc-cCCEEEECCccCccC
Confidence 34899999999999999988877 663355899999999999876631 2 33443322 699999999975442
Q ss_pred -----HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecc
Q 018020 88 -----KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWV 134 (362)
Q Consensus 88 -----~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r 134 (362)
++-...++.+ .+++| +..++.+ -.+++.|++.|+.+.-|....
T Consensus 193 ~~~~~pi~~~~l~~~-~~v~D--lvY~P~~-T~ll~~A~~~G~~~~~Gl~ML 240 (282)
T 3fbt_A 193 KEGESPVDKEVVAKF-SSAVD--LIYNPVE-TLFLKYARESGVKAVNGLYML 240 (282)
T ss_dssp STTCCSSCHHHHTTC-SEEEE--SCCSSSS-CHHHHHHHHTTCEEECSHHHH
T ss_pred CCccCCCCHHHcCCC-CEEEE--EeeCCCC-CHHHHHHHHCcCeEeCcHHHH
Confidence 2344556655 45555 4444433 457778889999887765443
No 205
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.58 E-value=0.00017 Score=66.01 Aligned_cols=78 Identities=21% Similarity=0.128 Sum_probs=53.4
Q ss_pred CCccC-CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH-------cCCCCCCcccCCHHHHhcCC
Q 018020 1 MATES-QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA-------NNFPPDAKVYGSYEALLDDK 72 (362)
Q Consensus 1 m~~~~-~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~e~l~~~ 72 (362)
|+.++ ++++||+|||+|.+|...+..+...+.++ +.++|+++++++..+.. .+.+..+..++|+++.+++
T Consensus 1 ~~~~~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~- 78 (331)
T 1pzg_A 1 MAPALVQRRKKVAMIGSGMIGGTMGYLCALRELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTG- 78 (331)
T ss_dssp --CCCCSCCCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTT-
T ss_pred CCcCcCCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCC-
Confidence 44433 24589999999999999888886653347 66999998776652221 2333233446899887775
Q ss_pred CCcEEEEcC
Q 018020 73 DIDAVYLPL 81 (362)
Q Consensus 73 ~~D~V~i~~ 81 (362)
.|+|+++.
T Consensus 79 -aDiVi~a~ 86 (331)
T 1pzg_A 79 -ADCVIVTA 86 (331)
T ss_dssp -CSEEEECC
T ss_pred -CCEEEEcc
Confidence 99999987
No 206
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.57 E-value=3.2e-05 Score=70.96 Aligned_cols=89 Identities=15% Similarity=0.175 Sum_probs=63.1
Q ss_pred ceeEEEEEe-ccHHHHHHHHHHhcC--CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHH-HhcCCCCcEEEEcCC
Q 018020 7 AAIRFGIIG-AADIARKLSRAITLA--PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEA-LLDDKDIDAVYLPLP 82 (362)
Q Consensus 7 ~~~~v~iiG-~G~~g~~~~~~~~~~--~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e-~l~~~~~D~V~i~~~ 82 (362)
+++||+|+| +|.+|...++.+.++ |.++++++.++... .+.+. ++- ... .+.+.+. .+ .++|+|+.|+|
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~--~~~-~~i-~~~~~~~~~~--~~vDvVf~a~g 74 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR--FNG-KTV-RVQNVEEFDW--SQVHIALFSAG 74 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE--ETT-EEE-EEEEGGGCCG--GGCSEEEECSC
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee--ecC-cee-EEecCChHHh--cCCCEEEECCC
Confidence 369999999 899999999998887 88999999975321 00000 110 011 1222222 22 36999999999
Q ss_pred CcccHHHHHHHHHcCCeEEE
Q 018020 83 TSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~ 102 (362)
...+.+++..++++|..|+.
T Consensus 75 ~~~s~~~a~~~~~~G~~vId 94 (336)
T 2r00_A 75 GELSAKWAPIAAEAGVVVID 94 (336)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHHHHHHcCCEEEE
Confidence 99999999999999986664
No 207
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.56 E-value=6e-05 Score=66.95 Aligned_cols=119 Identities=22% Similarity=0.227 Sum_probs=78.7
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
.-++.|+|+|.+|+..+..|.+. ++.-+.|++|+.+++++++++++- .. ....+++++-. .+.|+|+.+||...+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~-~~-~~~~~~~~l~~-~~~DivInaTp~gm~~ 195 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-GPSELVIANRDMAKALALRNELDH-SR-LRISRYEALEG-QSFDIVVNATSASLTA 195 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHCC-TT-EEEECSGGGTT-CCCSEEEECSSGGGGT
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhcc-CC-eeEeeHHHhcc-cCCCEEEECCCCCCCC
Confidence 35799999999999999988876 653355899999999999998762 11 12234555433 5799999999976542
Q ss_pred H---HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE-EEEeeecc
Q 018020 88 K---WAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ-LMDGTMWV 134 (362)
Q Consensus 88 ~---~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~-~~v~~~~r 134 (362)
+ +-...++.+ +++++ +..++.+ ..+++.|++.|+. +.-|....
T Consensus 196 ~~~~i~~~~l~~~-~~V~D--lvY~P~~-T~ll~~A~~~G~~~~~~Gl~ML 242 (272)
T 3pwz_A 196 DLPPLPADVLGEA-ALAYE--LAYGKGL-TPFLRLAREQGQARLADGVGML 242 (272)
T ss_dssp CCCCCCGGGGTTC-SEEEE--SSCSCCS-CHHHHHHHHHSCCEEECTHHHH
T ss_pred CCCCCCHHHhCcC-CEEEE--eecCCCC-CHHHHHHHHCCCCEEECCHHHH
Confidence 2 112334444 44555 4444433 3377788888986 66664433
No 208
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.56 E-value=0.00057 Score=56.63 Aligned_cols=110 Identities=13% Similarity=0.061 Sum_probs=69.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc---CCCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD---DKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~---~~~~D~V~i~~ 81 (362)
..+|+|+|+|.+|...+..|.+..+.+++ ++|+++++.+.+. +.|.. .++ ++.+.+.+ -.+.|+|++++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~-vid~~~~~~~~~~-~~g~~---~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISL-GIEIREEAAQQHR-SEGRN---VISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEE-EEESCHHHHHHHH-HTTCC---EEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEE-EEECCHHHHHHHH-HCCCC---EEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 45899999999999999988765145655 6799999888765 44542 222 23333322 24689999999
Q ss_pred CCcccHHHHHHHHHc-C--CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 82 PTSMHVKWAISVAQK-K--KHLLMEKPMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 82 ~~~~h~~~~~~al~~-g--k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
|+......+...++. | ..|++- +.+.+..+ ..++.|....+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~ii~~---~~~~~~~~----~l~~~G~~~vi 157 (183)
T 3c85_A 114 PHHQGNQTALEQLQRRNYKGQIAAI---AEYPDQLE----GLLESGVDAAF 157 (183)
T ss_dssp SSHHHHHHHHHHHHHTTCCSEEEEE---ESSHHHHH----HHHHHTCSEEE
T ss_pred CChHHHHHHHHHHHHHCCCCEEEEE---ECCHHHHH----HHHHcCCCEEE
Confidence 987655555545544 3 356552 44555544 33455665543
No 209
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=97.56 E-value=7e-05 Score=68.53 Aligned_cols=121 Identities=10% Similarity=0.059 Sum_probs=82.7
Q ss_pred ceeEEEEEeccHHHHHHHH----HHhcCCCcEEEEEEcCCHHHHHHHHHHc-CCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARKLSR----AITLAPNAVLSAVASRSLEKATNFAKAN-NFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~----~~~~~~~~~vv~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
.+-|+.|.|.|.+|...++ .++..+..++|+++ ++. .-+.+.+-. |.+.++.++.|++++++. .+|++++++
T Consensus 21 ~~~~~vi~~~g~~g~~~aKta~gllr~~~~~~iVgvi-~~~-~Gkd~ge~~~g~~~gipv~~d~~~al~~-~~d~lvig~ 97 (350)
T 2g0t_A 21 PGTPAAIVAWGQLGTAHAKTTYGLLRHSRLFKPVCVV-AEH-EGKMASDFVKPVRYDVPVVSSVEKAKEM-GAEVLIIGV 97 (350)
T ss_dssp TTEEEEEECTTTTTSGGGHHHHHHHHHCSSEEEEEEE-SSC-TTCBGGGTCC-CCSCCBEESSHHHHHHT-TCCEEEECC
T ss_pred cCCCEEEEeCCCCChHHHHHHHHHHhhCCCCeEEEEe-ecC-CCCcHHHhhCCCCCCceeeCCHHHHHhc-CCCEEEEEe
Confidence 3568999999998765443 34443669999999 542 122222222 344556789999999975 599999987
Q ss_pred CCcc------cHHHHHHHHHcCCeEEE--eCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccCh
Q 018020 82 PTSM------HVKWAISVAQKKKHLLM--EKPMALNVAEFDVILNACEENGVQLMDGTMWVHNP 137 (362)
Q Consensus 82 ~~~~------h~~~~~~al~~gk~V~~--EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p 137 (362)
.+.. =.+.+.+|+++|++|++ +-+ +.+-.++.++|+++|+.+..- |..|
T Consensus 98 a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~~----l~~~pel~~~A~~~Gv~i~dv---r~~p 154 (350)
T 2g0t_A 98 SNPGGYLEEQIATLVKKALSLGMDVISGLHFK----ISQQTEFLKIAHENGTRIIDI---RIPP 154 (350)
T ss_dssp CSCCHHHHHHHHHHHHHHHHTTCEEEECCCC------CCHHHHHHHHHHHTCCEEES---SSCC
T ss_pred cCCCCCCCHHHHHHHHHHHHcCCcEEeCChhh----hhCCHHHHHHHHHCCCEEEEe---CcCC
Confidence 4332 24788899999999985 334 333444788999999988754 6666
No 210
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=97.55 E-value=0.00018 Score=65.41 Aligned_cols=98 Identities=11% Similarity=0.127 Sum_probs=70.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CHHHHHHHHHH---cCCC---------------CCCccc--CCHHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SLEKATNFAKA---NNFP---------------PDAKVY--GSYEA 67 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~~~~~~~~~~---~~~~---------------~~~~~~--~~~~e 67 (362)
+||||+|+|.+|+..++.+.++ ++++++|-|. +.+....+.+- +|.- ....++ .+.++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 79 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChhh
Confidence 5899999999999999988777 8999999986 55555444331 2210 011222 14444
Q ss_pred H-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCCC
Q 018020 68 L-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPMA 107 (362)
Q Consensus 68 ~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~~ 107 (362)
+ ..+.++|+|+-||+.....+.+...+++| |.|++.-|-.
T Consensus 80 l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~ 121 (331)
T 2g82_O 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAK 121 (331)
T ss_dssp SCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred CcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCc
Confidence 4 23347899999999999999999999999 7788877743
No 211
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=97.55 E-value=4.5e-05 Score=72.28 Aligned_cols=90 Identities=16% Similarity=0.092 Sum_probs=64.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCc---EEEEEEcCCHHHHHHHHHHcCCCC-CCcc-cCCHH----HHhcCCCCcEEE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNA---VLSAVASRSLEKATNFAKANNFPP-DAKV-YGSYE----ALLDDKDIDAVY 78 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~---~vv~v~d~~~~~~~~~~~~~~~~~-~~~~-~~~~~----e~l~~~~~D~V~ 78 (362)
+.||.|||+|.+|+..++.+.+++++ +|+ ++|++...+ .+.+..|+.. ...+ -++++ ++|+. .|+|+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~-vaD~~~~~~-~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~--~DvVI 88 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVT-IIAAEGTKV-DVAQQYGVSFKLQQITPQNYLEVIGSTLEE--NDFLI 88 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEE-EEESSCCSC-CHHHHHTCEEEECCCCTTTHHHHTGGGCCT--TCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEE-Eeccchhhh-hHHhhcCCceeEEeccchhHHHHHHHHhcC--CCEEE
Confidence 47899999999999999988877765 455 557665432 3344445321 1112 23443 45543 49999
Q ss_pred EcCCCcccHHHHHHHHHcCCeEE
Q 018020 79 LPLPTSMHVKWAISVAQKKKHLL 101 (362)
Q Consensus 79 i~~~~~~h~~~~~~al~~gk~V~ 101 (362)
.++++..-..++..|+++|.|++
T Consensus 89 N~s~~~~~l~Im~acleaGv~Yl 111 (480)
T 2ph5_A 89 DVSIGISSLALIILCNQKGALYI 111 (480)
T ss_dssp ECCSSSCHHHHHHHHHHHTCEEE
T ss_pred ECCccccCHHHHHHHHHcCCCEE
Confidence 99999999999999999999988
No 212
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.54 E-value=0.00032 Score=63.58 Aligned_cols=74 Identities=15% Similarity=0.175 Sum_probs=52.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCC-cEEEEEEcCCHHHHHHHHHHcC-----CCCCCcc-cCCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPN-AVLSAVASRSLEKATNFAKANN-----FPPDAKV-YGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~-~~vv~v~d~~~~~~~~~~~~~~-----~~~~~~~-~~~~~e~l~~~~~D~V~i~~ 81 (362)
+||+|||+|.||...+..+....- .+| .++|+++++++.++.+++ .+..+.+ .+++ +.++ +.|+|++++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V-~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~--~aDvViiav 77 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDY-VFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALA--DADVVISTL 77 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEE-EEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGT--TCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEE-EEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhC--CCCEEEEec
Confidence 589999999999998888765531 354 589999988887765432 0011233 4676 5555 599999999
Q ss_pred CCccc
Q 018020 82 PTSMH 86 (362)
Q Consensus 82 ~~~~h 86 (362)
+....
T Consensus 78 ~~~~~ 82 (309)
T 1hyh_A 78 GNIKL 82 (309)
T ss_dssp SCGGG
T ss_pred CCccc
Confidence 98764
No 213
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.52 E-value=0.00028 Score=55.81 Aligned_cols=108 Identities=17% Similarity=0.150 Sum_probs=67.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHh--cCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALL--DDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l--~~~~~D~V~i~~~ 82 (362)
+.+|.|+|+|.+|...+..|.+. +.+++ ++|+++++.+.+.+. +.. .++ ++.+.+- .-.++|+|++++|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g~~V~-~id~~~~~~~~~~~~-~~~---~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-GKKVL-AVDKSKEKIELLEDE-GFD---AVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEE-EEESCHHHHHHHHHT-TCE---EEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEE-EEECCHHHHHHHHHC-CCc---EEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 45899999999999999999877 67766 678999988877653 432 122 2333332 1247999999999
Q ss_pred CcccHHHHHHHH-HcC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 83 TSMHVKWAISVA-QKK-KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 83 ~~~h~~~~~~al-~~g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+......+...+ +.| ..|++- +.+....+. .++.|+...
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~---~~~~~~~~~----l~~~G~~~v 120 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVR---VSSPKKKEE----FEEAGANLV 120 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEE---ESCGGGHHH----HHHTTCSEE
T ss_pred CHHHHHHHHHHHHHhCCceEEEE---EcChhHHHH----HHHcCCCEE
Confidence 765444444333 334 456552 334443333 355666443
No 214
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=97.51 E-value=0.00023 Score=63.86 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=56.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC--CCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN--FPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~--~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..||++||+|.||...+..+. . +++|+ ++|++++++++..+.+- ...++...+|+++ ++ ++|+|+.++|...
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~-v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~--~aDlVieavpe~~ 85 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVV-LQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VK--DCDIVMEAVFEDL 85 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEE-EECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GG--GCSEEEECCCSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEE-EEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-Hc--CCCEEEEcCcCCH
Confidence 468999999999999999998 5 88866 89999999888777620 0001245678876 55 4999999999987
Q ss_pred cH
Q 018020 86 HV 87 (362)
Q Consensus 86 h~ 87 (362)
..
T Consensus 86 ~v 87 (293)
T 1zej_A 86 NT 87 (293)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 215
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=97.47 E-value=0.00061 Score=61.79 Aligned_cols=99 Identities=18% Similarity=0.185 Sum_probs=69.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcC---CCcEEEEEEcC-CHHHHHHHHHH---cC-CC--------------CCCccc--C
Q 018020 8 AIRFGIIGAADIARKLSRAITLA---PNAVLSAVASR-SLEKATNFAKA---NN-FP--------------PDAKVY--G 63 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~---~~~~vv~v~d~-~~~~~~~~~~~---~~-~~--------------~~~~~~--~ 63 (362)
++||||.|+|.+|+..++.+... +++++++|-|. +.+....+.+- +| ++ +...++ .
T Consensus 1 ~ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 1 TIRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcC
Confidence 37999999999999999988777 79999999996 44434333211 10 00 011222 2
Q ss_pred CHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 64 SYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 64 ~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+.+++ ..+.++|+|+-+|+.....+.+...+++| |-|++--|.
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps 125 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcc
Confidence 33443 23347999999999999999999999999 567775553
No 216
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=97.43 E-value=0.00043 Score=62.92 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=69.0
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHHcCCC----CC---------------CcccC-
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKANNFP----PD---------------AKVYG- 63 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~~~~~----~~---------------~~~~~- 63 (362)
|.++||||=|+|.+|+..++++..+|+++|++|-|+ +.+.+..+. +|... ++ ..++.
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~-~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~ 87 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAE 87 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHh-ccCCCCCcCCCCEEEcCCEEEECCEEEEEEEc
Confidence 458999999999999999999888899999999993 555444332 22211 00 01111
Q ss_pred -CHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 64 -SYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 64 -~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+.+++ ..+.++|+|+-+|+...-.+.+...+++| |.|++.-|-
T Consensus 88 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps 133 (345)
T 2b4r_O 88 KDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP 133 (345)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred CCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCC
Confidence 22222 11127999999999999999999999999 667776663
No 217
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=97.43 E-value=0.00024 Score=67.09 Aligned_cols=109 Identities=9% Similarity=0.141 Sum_probs=71.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhc-------------CCCCc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLD-------------DKDID 75 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~-------------~~~~D 75 (362)
-|.-+||+|+||...+..|.+. +++|+ ++|+++++.+.+.+.. .| ..-..++++++ -.+.|
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G~~V~-~~D~~~~kv~~L~~g~-~p---i~epgl~~ll~~~~~~g~l~~ttd~~~aD 85 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-GVDVL-GVDINQQTIDKLQNGQ-IS---IEEPGLQEVYEEVLSSGKLKVSTTPEASD 85 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHTTC-CS---SCCTTHHHHHHHHHHTTCEEEESSCCCCS
T ss_pred CccEEEeeCHHHHHHHHHHHHC-CCEEE-EEECCHHHHHHHHCCC-CC---cCCCCHHHHHHhhcccCceEEeCchhhCC
Confidence 3678999999999999999877 78876 7899999999886532 21 12233444421 13689
Q ss_pred EEEEcCCCcccH--------HHHH---HH----HHcCCeEEEeCCCCCCHHHHHHHHHHH-HHcCC
Q 018020 76 AVYLPLPTSMHV--------KWAI---SV----AQKKKHLLMEKPMALNVAEFDVILNAC-EENGV 125 (362)
Q Consensus 76 ~V~i~~~~~~h~--------~~~~---~a----l~~gk~V~~EKP~~~~~~~~~~l~~~a-~~~~~ 125 (362)
+|++++|++... ..+. +. ++.| .+++.|- +..+..++++.+.. ++.|.
T Consensus 86 vvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g-~iVV~~S-TV~pgtt~~v~~~i~e~~g~ 149 (431)
T 3ojo_A 86 VFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKG-NTIIVES-TIAPKTMDDFVKPVIENLGF 149 (431)
T ss_dssp EEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTT-EEEEECS-CCCTTHHHHTHHHHHHTTTC
T ss_pred EEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCC-CEEEEec-CCChhHHHHHHHHHHHHcCC
Confidence 999999988742 1222 22 2234 4666665 66777777776654 33553
No 218
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.42 E-value=6.3e-05 Score=67.13 Aligned_cols=118 Identities=16% Similarity=0.180 Sum_probs=75.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
.-++.|+|+|.+|+..+..|.+. ++.-+.|++|+.+++++++++++-...+ ...+++++. .+.|+|+.+||...+.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~~~a~~la~~~~~~~~~-~~~~~~~l~--~~aDiIInaTp~gm~~ 201 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ-QPASITVTNRTFAKAEQLAELVAAYGEV-KAQAFEQLK--QSYDVIINSTSASLDG 201 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESSHHHHHHHHHHHGGGSCE-EEEEGGGCC--SCEEEEEECSCCCC--
T ss_pred CCEEEEECchHHHHHHHHHHHhc-CCCeEEEEECCHHHHHHHHHHhhccCCe-eEeeHHHhc--CCCCEEEEcCcCCCCC
Confidence 45899999999999999999876 6533558999999999999887521011 123556654 4699999999987654
Q ss_pred HH---HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE-EEEeeec
Q 018020 88 KW---AISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ-LMDGTMW 133 (362)
Q Consensus 88 ~~---~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~-~~v~~~~ 133 (362)
+. -...++.| .++++ +..++.+. .+++.|++.|+. +.-|...
T Consensus 202 ~~~~l~~~~l~~~-~~V~D--lvY~P~~T-~ll~~A~~~G~~~~~~Gl~M 247 (281)
T 3o8q_A 202 ELPAIDPVIFSSR-SVCYD--MMYGKGYT-VFNQWARQHGCAQAIDGLGM 247 (281)
T ss_dssp --CSCCGGGEEEE-EEEEE--SCCCSSCC-HHHHHHHHTTCSEEECTHHH
T ss_pred CCCCCCHHHhCcC-CEEEE--ecCCCccC-HHHHHHHHCCCCEEECcHHH
Confidence 31 11223333 34455 33443333 356788888876 6655433
No 219
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=97.41 E-value=0.0002 Score=65.12 Aligned_cols=98 Identities=21% Similarity=0.239 Sum_probs=68.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CHHHHHHHHHH---cC-CC--------------CCCcccC--CHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SLEKATNFAKA---NN-FP--------------PDAKVYG--SYE 66 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~~~~~~~~~~---~~-~~--------------~~~~~~~--~~~ 66 (362)
++||||.|+|.+|+..++.+...|++++++|-|. +.+....+.+- +| ++ +...++. +.+
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~ 81 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPS 81 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCChh
Confidence 4799999999999999999888889999999996 45544333221 11 00 0011221 222
Q ss_pred HH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCC
Q 018020 67 AL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKP 105 (362)
Q Consensus 67 e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP 105 (362)
++ ..+.++|+|+-+|+.....+.+...+++| |.|++.-|
T Consensus 82 ~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisap 122 (342)
T 2ep7_A 82 QIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAP 122 (342)
T ss_dssp GCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSC
T ss_pred hCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCC
Confidence 22 11127999999999999999999999999 67887766
No 220
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.39 E-value=0.00029 Score=63.88 Aligned_cols=67 Identities=22% Similarity=0.161 Sum_probs=53.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++.. .+.++|. . +.++++++.. .|+|++++|...
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~-G~~V~-~~d~~~~~~--~~~~~g~----~-~~~l~ell~~--aDvVvl~~P~~~ 208 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAM-GMKVL-AYDILDIRE--KAEKINA----K-AVSLEELLKN--SDVISLHVTVSK 208 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT-TCEEE-EECSSCCHH--HHHHTTC----E-ECCHHHHHHH--CSEEEECCCCCT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEE-EECCCcchh--HHHhcCc----e-ecCHHHHHhh--CCEEEEeccCCh
Confidence 46899999999999999999877 68866 788887654 2456664 2 3589999985 999999999643
No 221
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.38 E-value=9.5e-05 Score=66.08 Aligned_cols=121 Identities=19% Similarity=0.198 Sum_probs=79.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---CCCccc--CCHHHHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---PDAKVY--GSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~~~~~~--~~~~e~l~~~~~D~V~i~~~ 82 (362)
.-++.|+|+|.+|+..+..+.+. ++.-+.|++|+.+++++++++++.. ..+..+ +++++.+.. .|+|+.+||
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp 203 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA--ADGVVNATP 203 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHH--SSEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhc--CCEEEECCC
Confidence 34799999999999999988877 6643558999999999888776310 011223 377777775 899999999
Q ss_pred CcccH----HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeeccc
Q 018020 83 TSMHV----KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVH 135 (362)
Q Consensus 83 ~~~h~----~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~ 135 (362)
...+. ++-...++.+ ++++| +..++.+ -.+++.|++.|+++.-|.....
T Consensus 204 ~Gm~~~~~~pi~~~~l~~~-~~v~D--lvY~P~~-T~ll~~A~~~G~~~~~Gl~MLv 256 (283)
T 3jyo_A 204 MGMPAHPGTAFDVSCLTKD-HWVGD--VVYMPIE-TELLKAARALGCETLDGTRMAI 256 (283)
T ss_dssp TTSTTSCSCSSCGGGCCTT-CEEEE--CCCSSSS-CHHHHHHHHHTCCEECTHHHHH
T ss_pred CCCCCCCCCCCCHHHhCCC-CEEEE--ecCCCCC-CHHHHHHHHCcCeEeCcHHHHH
Confidence 65442 1222334444 34444 3333322 3466778888888776654443
No 222
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.38 E-value=0.0001 Score=67.88 Aligned_cols=91 Identities=15% Similarity=0.244 Sum_probs=62.5
Q ss_pred CceeEEEEEe-ccHHHHHHHHHHhcCC-----CcEEEEEEcCCHHHHHHHHHHcC-CC--CCCccc-CCHHHHhcCCCCc
Q 018020 6 QAAIRFGIIG-AADIARKLSRAITLAP-----NAVLSAVASRSLEKATNFAKANN-FP--PDAKVY-GSYEALLDDKDID 75 (362)
Q Consensus 6 ~~~~~v~iiG-~G~~g~~~~~~~~~~~-----~~~vv~v~d~~~~~~~~~~~~~~-~~--~~~~~~-~~~~e~l~~~~~D 75 (362)
|+++||+|+| +|.+|...++.|.++| .++++++.++... .+.+...+. +. ....+. .+.++ +. ++|
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~a-gk~~~~~~~~l~~~~~~~~~~~~~~~-~~--~~D 82 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSA-GSTLGEHHPHLTPLAHRVVEPTEAAV-LG--GHD 82 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCT-TSBGGGTCTTCGGGTTCBCEECCHHH-HT--TCS
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcC-CCchhhhcccccccceeeeccCCHHH-hc--CCC
Confidence 4468999999 7999999999999999 8999999875421 111111110 00 011111 13333 43 599
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEE
Q 018020 76 AVYLPLPTSMHVKWAISVAQKKKHLL 101 (362)
Q Consensus 76 ~V~i~~~~~~h~~~~~~al~~gk~V~ 101 (362)
+|+.|+|.....+++..+ ++|+.|+
T Consensus 83 vVf~alg~~~s~~~~~~~-~~G~~vI 107 (352)
T 2nqt_A 83 AVFLALPHGHSAVLAQQL-SPETLII 107 (352)
T ss_dssp EEEECCTTSCCHHHHHHS-CTTSEEE
T ss_pred EEEECCCCcchHHHHHHH-hCCCEEE
Confidence 999999999999999999 9997655
No 223
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.38 E-value=0.00018 Score=58.15 Aligned_cols=108 Identities=12% Similarity=0.138 Sum_probs=68.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc--CCCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD--DKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~--~~~~D~V~i~~ 81 (362)
...+|+|+|+|.+|...+..|.+. +.+++ ++|+++++++.+.++.|.. .+. .+.+.+.+ -.++|+|++++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~-vid~~~~~~~~~~~~~g~~---~~~~d~~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVV-VVDKNEYAFHRLNSEFSGF---TVVGDAAEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESCGGGGGGSCTTCCSE---EEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEE-EEECCHHHHHHHHhcCCCc---EEEecCCCHHHHHHcCcccCCEEEEEe
Confidence 357999999999999999999876 56766 6788888776554234431 121 23333322 13689999999
Q ss_pred CCcccHHHHHHHHHc--C-CeEEEeCCCCCCHHHHHHHHHHHHHcCCE
Q 018020 82 PTSMHVKWAISVAQK--K-KHLLMEKPMALNVAEFDVILNACEENGVQ 126 (362)
Q Consensus 82 ~~~~h~~~~~~al~~--g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~ 126 (362)
++..-...+...++. + ..+++. ..+....+ ..++.|..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~iv~~---~~~~~~~~----~l~~~G~~ 133 (155)
T 2g1u_A 93 NDDSTNFFISMNARYMFNVENVIAR---VYDPEKIK----IFEENGIK 133 (155)
T ss_dssp SCHHHHHHHHHHHHHTSCCSEEEEE---CSSGGGHH----HHHTTTCE
T ss_pred CCcHHHHHHHHHHHHHCCCCeEEEE---ECCHHHHH----HHHHCCCc
Confidence 997766666666654 4 344442 33333332 34446766
No 224
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.37 E-value=0.00097 Score=63.02 Aligned_cols=73 Identities=10% Similarity=0.056 Sum_probs=50.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC----------------CCCcccCCHHHHhc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP----------------PDAKVYGSYEALLD 70 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~----------------~~~~~~~~~~e~l~ 70 (362)
++-+|+|||+|++|...+-.+.+. +++|+ .+|.++++.+.+.+-. .| ....+.+|.++.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~-G~~V~-g~Did~~kV~~ln~G~-~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALL-GHRVV-GYDVNPSIVERLRAGR-PHIYEPGLEEALGRALSSGRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-TCEEE-EECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-CCcEE-EEECCHHHHHHHHCCC-CCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHh
Confidence 356899999999999888888766 67877 5799999887764310 00 01234667778777
Q ss_pred CCCCcEEEEcCCCc
Q 018020 71 DKDIDAVYLPLPTS 84 (362)
Q Consensus 71 ~~~~D~V~i~~~~~ 84 (362)
. .|+++||.|++
T Consensus 97 ~--ad~~~I~VpTP 108 (444)
T 3vtf_A 97 A--TDATFIAVGTP 108 (444)
T ss_dssp T--SSEEEECCCCC
T ss_pred c--CCceEEEecCC
Confidence 5 67777665543
No 225
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.36 E-value=0.0002 Score=63.67 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=73.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
..+++|+|+|.+|...+..+.+.. .+|+ +++|+.+++++++++++....+. ..+++++.+ .++|+|+.++|...+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G-~~V~-v~~R~~~~~~~la~~~~~~~~~~-~~~~~~~~~-~~~DivVn~t~~~~~~ 194 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLD-CAVT-ITNRTVSRAEELAKLFAHTGSIQ-ALSMDELEG-HEFDLIINATSSGISG 194 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEE-EECSSHHHHHHHHHHTGGGSSEE-ECCSGGGTT-CCCSEEEECCSCGGGT
T ss_pred CCEEEEECCcHHHHHHHHHHHHcC-CEEE-EEECCHHHHHHHHHHhhccCCee-EecHHHhcc-CCCCEEEECCCCCCCC
Confidence 357999999999999999998874 6655 88999999999988875210111 234455543 4799999999976652
Q ss_pred H---HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE-EEEe
Q 018020 88 K---WAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ-LMDG 130 (362)
Q Consensus 88 ~---~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~-~~v~ 130 (362)
. +-...++.|. ++++ +..+..+. .+.+.+++.|.. +.-|
T Consensus 195 ~~~~i~~~~l~~~~-~v~D--~~y~p~~t-~~~~~a~~~G~~~~~~G 237 (271)
T 1nyt_A 195 DIPAIPSSLIHPGI-YCYD--MFYQKGKT-PFLAWCEQRGSKRNADG 237 (271)
T ss_dssp CCCCCCGGGCCTTC-EEEE--SCCCSSCC-HHHHHHHHTTCCEEECT
T ss_pred CCCCCCHHHcCCCC-EEEE--eccCCcCC-HHHHHHHHcCCCeecCC
Confidence 1 1112233443 4444 33333222 356778888876 5444
No 226
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.35 E-value=0.00051 Score=62.43 Aligned_cols=79 Identities=10% Similarity=0.134 Sum_probs=55.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---------CCCcccCCHHHHhcCCCCcEE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---------PDAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~e~l~~~~~D~V 77 (362)
.++||+|||+|.||..++..|.+. +.+|. ++ +++++++.+.++ |+. ..+...++.+++ . +.|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G~~V~-l~-~~~~~~~~i~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~--~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-GHEVI-LI-ARPQHVQAIEAT-GLRLETQSFDEQVKVSASSDPSAV-Q--GADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-TCEEE-EE-CCHHHHHHHHHH-CEEEECSSCEEEECCEEESCGGGG-T--TCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-CCeEE-EE-EcHhHHHHHHhC-CeEEEcCCCcEEEeeeeeCCHHHc-C--CCCEE
Confidence 468999999999999999998776 56766 45 778888887664 211 112345666553 3 69999
Q ss_pred EEcCCCcccHHHHHH
Q 018020 78 YLPLPTSMHVKWAIS 92 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~ 92 (362)
++++|+....+.+..
T Consensus 91 ilavk~~~~~~~l~~ 105 (318)
T 3hwr_A 91 LFCVKSTDTQSAALA 105 (318)
T ss_dssp EECCCGGGHHHHHHH
T ss_pred EEEcccccHHHHHHH
Confidence 999999855544443
No 227
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.35 E-value=0.00027 Score=64.77 Aligned_cols=67 Identities=24% Similarity=0.336 Sum_probs=53.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
.++|||||+|.||...+..++.. +++|+ ++|++++. ..+.++|+ . +.++++++.. .|+|++++|...
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~--~~~~~~g~----~-~~~l~~~l~~--aDvVil~vp~~~ 216 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF-NMRIL-YYSRTRKE--EVERELNA----E-FKPLEDLLRE--SDFVVLAVPLTR 216 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCH--HHHHHHCC----E-ECCHHHHHHH--CSEEEECCCCCT
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCEEE-EECCCcch--hhHhhcCc----c-cCCHHHHHhh--CCEEEECCCCCh
Confidence 46899999999999999999876 67865 78888765 33445564 2 4689999985 899999999865
No 228
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.34 E-value=9.5e-06 Score=72.26 Aligned_cols=117 Identities=18% Similarity=0.221 Sum_probs=73.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
.-++.|||+|.+|+..+..|.+. ++.-+.|++|+.+++++++++... ..++++.+.+. +.|+|+.+||...+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~~~a~~la~~~~~----~~~~~~~~~~~--~aDiVInaTp~Gm~~ 189 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI-VRPTLTVANRTMSRFNNWSLNINK----INLSHAESHLD--EFDIIINTTPAGMNG 189 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCGGGGTTCCSCCEE----ECHHHHHHTGG--GCSEEEECCC-----
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhccc----ccHhhHHHHhc--CCCEEEECccCCCCC
Confidence 35799999999999999999876 563345899999888776653321 22445555555 489999999976543
Q ss_pred HH----HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeeccc
Q 018020 88 KW----AISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVH 135 (362)
Q Consensus 88 ~~----~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~ 135 (362)
.. -...++.+ .++++ +..++.+ ..+++.|++.|+.+.-|.....
T Consensus 190 ~~~~~l~~~~l~~~-~~V~D--~vY~P~~-T~ll~~A~~~G~~~~~Gl~MLv 237 (277)
T 3don_A 190 NTDSVISLNRLASH-TLVSD--IVYNPYK-TPILIEAEQRGNPIYNGLDMFV 237 (277)
T ss_dssp --CCSSCCTTCCSS-CEEEE--SCCSSSS-CHHHHHHHHTTCCEECTHHHHH
T ss_pred CCcCCCCHHHcCCC-CEEEE--ecCCCCC-CHHHHHHHHCcCEEeCCHHHHH
Confidence 21 11223333 45555 3333333 2578889999988876654433
No 229
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=97.34 E-value=0.0025 Score=58.22 Aligned_cols=209 Identities=11% Similarity=0.097 Sum_probs=131.4
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCC-cEEEEEE-cCCHHHHHHHHHHcCCCCCCcccCC--------------------
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPN-AVLSAVA-SRSLEKATNFAKANNFPPDAKVYGS-------------------- 64 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~-~~vv~v~-d~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 64 (362)
+-+|.|+|. |+||..-+..++++|+ ++|+++. .++.+.+.+.+++|+.. ..+..|
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~--~v~v~d~~~~~~L~~~l~~~~~~~~v 86 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPR--YAVMDDEASAKLLKTMLQQQGSRTEV 86 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCS--EEEESSHHHHHHHHHHHHHTTCCCEE
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCC--EEEEcCHHHHHHHHHHhhcCCCCcEE
Confidence 468999995 9999999999999986 9999975 56777777777777622 122211
Q ss_pred ------HHHHhcCCCCcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCC-HHHHHHHHHHHHHcCCEEEEeeecccCh
Q 018020 65 ------YEALLDDKDIDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALN-VAEFDVILNACEENGVQLMDGTMWVHNP 137 (362)
Q Consensus 65 ------~~e~l~~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~-~~~~~~l~~~a~~~~~~~~v~~~~r~~p 137 (362)
+.++...+++|.|+.+..-..-..-...|+++||.|.+--- .+ +....=+.++++++|..+.. -..
T Consensus 87 ~~G~~~l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLANK--EsLV~aG~lv~~~a~~~~~~ilP-----VDS 159 (406)
T 1q0q_A 87 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANK--ESLVTCGRLFMDAVKQSKAQLLP-----VDS 159 (406)
T ss_dssp EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCH--HHHHHHTHHHHHHHHHHTCEEEE-----CSH
T ss_pred EeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCeEEEech--HHHHhchHHHHHHHHHcCCeEEE-----ecc
Confidence 22444556799999999999999999999999999987311 12 33445567788888988763 344
Q ss_pred hHHHHHHhh----cCC--C---CccceEEEEEEeeecCCcccc--------------cCccCcCCCCCCCcccccccc--
Q 018020 138 RTAQMKEFV----SDP--Q---RFGQLRTMHSCFSFAGDAEFL--------------KNDIRVKPDLDGLGALGDAGW-- 192 (362)
Q Consensus 138 ~~~~~k~~i----~~~--g---~iG~i~~i~~~~~~~~~~~~~--------------~~~w~~~~~~~ggg~l~~~g~-- 192 (362)
....+-+++ ... + ...+|..+-..-+..+...+. ..+|..- ..+-.|-.+
T Consensus 160 EHsAIfQ~L~~~~~g~~~~~~~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG-----~KITIDSATmm 234 (406)
T 1q0q_A 160 EHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMG-----RKISVDSATMM 234 (406)
T ss_dssp HHHHHHHTSCHHHHTTTTTSCTGGGTEEEEEEEECCCTTTTSCGGGGGGCCHHHHHCCSSCCCC-----HHHHHHHHHTH
T ss_pred hHHHHHHHcccccCCccccccCCcccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCC-----CeeeehHHhHH
Confidence 555566665 211 0 224577766655433221110 1223221 012111110
Q ss_pred -hHHHH--HHHHccCCCCcEEEEeeccccCCCCeeEeeEEEEEeCCCcE
Q 018020 193 -YGIRS--ILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRV 238 (362)
Q Consensus 193 -h~id~--~~~l~g~~~~~~V~a~~~~~~~~~~~~d~~~~~~~~~~G~~ 238 (362)
-.+.+ ..||||. +++++.....+ ....+.+++|.||.+
T Consensus 235 NKGLEvIEA~~LF~~-~~d~I~VvVHP-------QSiIHSmVef~DGSv 275 (406)
T 1q0q_A 235 NKGLEYIEARWLFNA-SASQMEVLIHP-------QSVIHSMVRYQDGSV 275 (406)
T ss_dssp HHHHHHHHHHHHHTC-CGGGEEEEECT-------TCCEEEEEEETTSCE
T ss_pred hhhHHHHHHHHHcCC-CHHHeEEEECC-------CCceeEEEEEcCCcE
Confidence 12333 4899995 46777777432 225688999999976
No 230
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.33 E-value=0.00027 Score=65.11 Aligned_cols=69 Identities=20% Similarity=0.192 Sum_probs=53.0
Q ss_pred eeEEEEEeccHHHHHHHHHHh-cCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAIT-LAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~-~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
-.+|||||+|.||...+..++ .. +++|+ ++|+++++.+. +.++|+ ...++++++++. .|+|++++|...
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~-G~~V~-~~d~~~~~~~~-~~~~g~----~~~~~l~ell~~--aDvVil~vp~~~ 232 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGL-GMKLV-YYDVAPADAET-EKALGA----ERVDSLEELARR--SDCVSVSVPYMK 232 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CCEEE-EECSSCCCHHH-HHHHTC----EECSSHHHHHHH--CSEEEECCCCSG
T ss_pred CCEEEEEEECHHHHHHHHHHHHhc-CCEEE-EECCCCcchhh-HhhcCc----EEeCCHHHHhcc--CCEEEEeCCCCh
Confidence 358999999999999999998 66 68866 68887654443 234454 344689999985 999999999864
No 231
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.32 E-value=0.00036 Score=64.16 Aligned_cols=68 Identities=18% Similarity=0.238 Sum_probs=52.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|+++...+. +.+.|+ ..+++++++++. .|+|++++|..
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~-G~~V~-~~dr~~~~~~~-~~~~g~----~~~~~l~ell~~--aDvV~l~~Plt 231 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPF-GCNLL-YHDRLQMAPEL-EKETGA----KFVEDLNEMLPK--CDVIVINMPLT 231 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-CCEEE-EECSSCCCHHH-HHHHCC----EECSCHHHHGGG--CSEEEECSCCC
T ss_pred CCEEeEEEeCHHHHHHHHHHHHC-CCEEE-EeCCCccCHHH-HHhCCC----eEcCCHHHHHhc--CCEEEECCCCC
Confidence 46899999999999999999877 78855 68887533333 334454 456799999986 99999999964
No 232
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.31 E-value=0.00044 Score=63.66 Aligned_cols=67 Identities=24% Similarity=0.257 Sum_probs=52.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|++... ..+.+.|+ ...++++++++. .|+|++++|..
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~--~~~~~~g~----~~~~~l~ell~~--aDiV~l~~Plt 226 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF-GMNVL-VWGRENSK--ERARADGF----AVAESKDALFEQ--SDVLSVHLRLN 226 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSHHHH--HHHHHTTC----EECSSHHHHHHH--CSEEEECCCCS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-CCEEE-EECCCCCH--HHHHhcCc----eEeCCHHHHHhh--CCEEEEeccCc
Confidence 46899999999999999999877 78876 68887532 23445554 456799999986 89999999864
No 233
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.31 E-value=8.9e-05 Score=68.08 Aligned_cols=86 Identities=9% Similarity=0.143 Sum_probs=60.8
Q ss_pred eeEEEEEe-ccHHHHHHHHHHh--cCCCcEEEEEEcCCHHHHHHHHHHc-CCCCCCcccCCHH-HHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIG-AADIARKLSRAIT--LAPNAVLSAVASRSLEKATNFAKAN-NFPPDAKVYGSYE-ALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG-~G~~g~~~~~~~~--~~~~~~vv~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~-e~l~~~~~D~V~i~~~ 82 (362)
++||+|+| +|.+|+..++.|. .+|.++++++.++.... +.+. + +. ... +.+.+ +.+ .++|+|+.|+|
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g-~~~~--~~g~--~i~-~~~~~~~~~--~~~DvV~~a~g 77 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QRMG--FAES--SLR-VGDVDSFDF--SSVGLAFFAAA 77 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-CEEE--ETTE--EEE-CEEGGGCCG--GGCSEEEECSC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCC-Cccc--cCCc--ceE-EecCCHHHh--cCCCEEEEcCC
Confidence 58999999 7999999999887 78999999998754210 0000 1 10 011 12221 112 36999999999
Q ss_pred CcccHHHHHHHHHcCCeEE
Q 018020 83 TSMHVKWAISVAQKKKHLL 101 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~ 101 (362)
...+.+++..++++|..|+
T Consensus 78 ~~~s~~~a~~~~~aG~kvI 96 (340)
T 2hjs_A 78 AEVSRAHAERARAAGCSVI 96 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHCCCEEE
Confidence 9999999999999997655
No 234
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.31 E-value=0.00037 Score=63.39 Aligned_cols=67 Identities=15% Similarity=0.147 Sum_probs=52.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|||||+|.||+..++.++.. +++|+ ++|+ +++.. .+.++|+ ...++++++++. .|+|++++|..
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~-G~~V~-~~d~~~~~~~--~~~~~g~----~~~~~l~ell~~--aDvVil~~p~~ 213 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGF-DMDID-YFDTHRASSS--DEASYQA----TFHDSLDSLLSV--SQFFSLNAPST 213 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEE-EECSSCCCHH--HHHHHTC----EECSSHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEE-EECCCCcChh--hhhhcCc----EEcCCHHHHHhh--CCEEEEeccCc
Confidence 46899999999999999999876 68866 7888 76542 3445564 345589999985 99999999965
No 235
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=97.29 E-value=0.0022 Score=58.13 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=70.5
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHHcCCC----CC---------------Cccc--C
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKANNFP----PD---------------AKVY--G 63 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~~~~~----~~---------------~~~~--~ 63 (362)
+++||||.|+|.||+..++.+...+ +++++|.|+ +.+.+..+- +|+.. ++ +.++ .
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~-~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMF-KYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK 83 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CeeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccc-cccCCCCCCCCcEEEcCCEEEECCEEEEEEecC
Confidence 5799999999999998888877665 999999996 555554442 23211 00 1111 1
Q ss_pred CHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 64 SYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 64 ~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+.+++ ..+.++|+|+-+|......+.+...+++| |.|++.-|-
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps 128 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPS 128 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCC
Confidence 23332 12237999999999999999999999999 789988874
No 236
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=97.28 E-value=0.00037 Score=63.88 Aligned_cols=90 Identities=20% Similarity=0.262 Sum_probs=63.5
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CCCCCccc-CCHHHHhcCCCCcEEEEcCCC
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FPPDAKVY-GSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~~~~~~~-~~~~e~l~~~~~D~V~i~~~~ 83 (362)
.++||||||+ |..|..+++.|.++|.++|+.+.+++ ..-+.+.+-+. +..+..+. .+.+++++ ++|+|+.|+|.
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~aG~~~~~~~p~~~~~l~~~~~~~~~~~~--~~Dvvf~alp~ 88 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YAGKKLEEIFPSTLENSILSEFDPEKVSK--NCDVLFTALPA 88 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TTTSBHHHHCGGGCCCCBCBCCCHHHHHH--HCSEEEECCST
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-cccCChHHhChhhccCceEEeCCHHHhhc--CCCEEEECCCc
Confidence 4799999996 88999999999999999999988753 22333332211 00111121 24555544 49999999999
Q ss_pred cccHHHHHHHHHcCCeEE
Q 018020 84 SMHVKWAISVAQKKKHLL 101 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~ 101 (362)
....+++..+ +|..|+
T Consensus 89 ~~s~~~~~~~--~g~~VI 104 (351)
T 1vkn_A 89 GASYDLVREL--KGVKII 104 (351)
T ss_dssp THHHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHh--CCCEEE
Confidence 9999999888 776655
No 237
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.00073 Score=61.81 Aligned_cols=63 Identities=21% Similarity=0.179 Sum_probs=48.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..+..++.. +++|+ ++|++++. ..+ ...+.+++++++. .|+|++++|..
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~-G~~V~-~~dr~~~~------~~~----~~~~~sl~ell~~--aDvVil~vP~t 233 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF-GMSVR-YWNRSTLS------GVD----WIAHQSPVDLARD--SDVLAVCVAAS 233 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEE-EECSSCCT------TSC----CEECSSHHHHHHT--CSEEEECC---
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEE-EEcCCccc------ccC----ceecCCHHHHHhc--CCEEEEeCCCC
Confidence 36899999999999999999876 78866 78887643 112 2457899999986 99999999953
No 238
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.27 E-value=0.0008 Score=52.94 Aligned_cols=106 Identities=13% Similarity=0.177 Sum_probs=64.8
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcc---cCCHHHHhc--CCCCcEEEEcCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKV---YGSYEALLD--DKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~---~~~~~e~l~--~~~~D~V~i~~~~ 83 (362)
.+|+|+|+|.+|...+..+.+. +.+++ ++|+++++.+.+.+. +.. .+ ..+.+.+.+ ..++|+|++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~-g~~v~-~~d~~~~~~~~~~~~-~~~---~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM-GHEVL-AVDINEEKVNAYASY-ATH---AVIANATEENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCCE-EEESCHHHHHTTTTT-CSE---EEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred CcEEEECCCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHHh-CCE---EEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence 4699999999999999999876 46655 678888877655432 221 11 234444332 2469999999998
Q ss_pred ccc--HHHHHHHHHcC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Q 018020 84 SMH--VKWAISVAQKK-KHLLMEKPMALNVAEFDVILNACEENGVQL 127 (362)
Q Consensus 84 ~~h--~~~~~~al~~g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~ 127 (362)
..+ ..++..+.+.| +++++ .+.+....+ ..++.|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~ii~---~~~~~~~~~----~l~~~g~~~ 120 (144)
T 2hmt_A 81 NIQASTLTTLLLKELDIPNIWV---KAQNYYHHK----VLEKIGADR 120 (144)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEE---ECCSHHHHH----HHHHHTCSE
T ss_pred chHHHHHHHHHHHHcCCCeEEE---EeCCHHHHH----HHHHcCCCE
Confidence 633 34444455566 34554 344555433 234456543
No 239
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.27 E-value=0.00046 Score=63.07 Aligned_cols=63 Identities=29% Similarity=0.355 Sum_probs=50.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|||||+|.||+..+..++.. +++|+ ++|++++... + ...+.+++++++. .|+|++++|..
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~-G~~V~-~~dr~~~~~~------g----~~~~~~l~ell~~--aDvVil~vP~~ 226 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAF-DCPIS-YFSRSKKPNT------N----YTYYGSVVELASN--SDILVVACPLT 226 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-TCCEE-EECSSCCTTC------C----SEEESCHHHHHHT--CSEEEECSCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEE-EECCCchhcc------C----ceecCCHHHHHhc--CCEEEEecCCC
Confidence 45899999999999999999876 67765 6888765321 3 2457899999985 99999999985
No 240
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.26 E-value=0.00032 Score=64.50 Aligned_cols=67 Identities=16% Similarity=0.158 Sum_probs=52.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++.+.. .+.++|. ..+.+++++++. .|+|++++|..
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~-G~~V~-~~d~~~~~~--~~~~~g~----~~~~~l~ell~~--aDvV~l~~P~t 234 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF-GFNVL-FYDPYLSDG--VERALGL----QRVSTLQDLLFH--SDCVTLHCGLN 234 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEE-EECTTSCTT--HHHHHTC----EECSSHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-CCEEE-EECCCcchh--hHhhcCC----eecCCHHHHHhc--CCEEEEcCCCC
Confidence 46899999999999999999876 78876 688865432 2345564 356689999985 99999999975
No 241
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.25 E-value=0.00066 Score=62.05 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=53.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|++.+.. .+.++|+. +.+++++++. .|+|++++|...
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~--~~~~~g~~-----~~~l~ell~~--aDvV~l~~P~t~ 231 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF-GMKTI-GYDPIISPE--VSASFGVQ-----QLPLEEIWPL--CDFITVHTPLLP 231 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEE-EECSSSCHH--HHHHTTCE-----ECCHHHHGGG--CSEEEECCCCCT
T ss_pred cCEEEEEeECHHHHHHHHHHHHC-CCEEE-EECCCcchh--hhhhcCce-----eCCHHHHHhc--CCEEEEecCCCH
Confidence 45899999999999999999876 68876 688876542 34566642 4589999985 999999999864
No 242
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.24 E-value=0.0005 Score=62.14 Aligned_cols=67 Identities=21% Similarity=0.236 Sum_probs=52.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++. + .+.++|+. +.+++++++. .|+|++++|...
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~-G~~V~-~~d~~~~~-~-~~~~~g~~-----~~~l~ell~~--aDvV~l~~p~~~ 208 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANAL-GMNIL-LYDPYPNE-E-RAKEVNGK-----FVDLETLLKE--SDVVTIHVPLVE 208 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCH-H-HHHHTTCE-----ECCHHHHHHH--CSEEEECCCCST
T ss_pred CceEEEEccCHHHHHHHHHHHHC-CCEEE-EECCCCCh-h-hHhhcCcc-----ccCHHHHHhh--CCEEEEecCCCh
Confidence 46899999999999999999877 68866 78887765 2 34566642 3489999985 999999999753
No 243
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.22 E-value=0.00041 Score=63.59 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=51.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|+++...+.. .+. ...++++++++. .|+|++++|..
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~-G~~V~-~~dr~~~~~~~~---~g~----~~~~~l~ell~~--sDvV~l~~Plt 238 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGF-GLAIH-YHNRTRLSHALE---EGA----IYHDTLDSLLGA--SDIFLIAAPGR 238 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTT-TCEEE-EECSSCCCHHHH---TTC----EECSSHHHHHHT--CSEEEECSCCC
T ss_pred CCEEEEEEeChhHHHHHHHHHHC-CCEEE-EECCCCcchhhh---cCC----eEeCCHHHHHhh--CCEEEEecCCC
Confidence 35899999999999999999877 78876 588875332221 142 455799999986 99999999964
No 244
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.19 E-value=0.0029 Score=56.86 Aligned_cols=98 Identities=13% Similarity=0.196 Sum_probs=64.8
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
.||+||| +|.||..++..+.+. +.+|. ++|++++ .+.++.+.. .|+|++++|+..-.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-G~~V~-~~~~~~~------------------~~~~~~~~~--aDvVilavp~~~~~ 79 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-GYPIS-ILDREDW------------------AVAESILAN--ADVVIVSVPINLTL 79 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-TCCEE-EECTTCG------------------GGHHHHHTT--CSEEEECSCGGGHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-CCeEE-EEECCcc------------------cCHHHHhcC--CCEEEEeCCHHHHH
Confidence 4899999 999999999999876 56655 6787653 156677764 99999999998877
Q ss_pred HHHHHHHHc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeee
Q 018020 88 KWAISVAQK--KKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTM 132 (362)
Q Consensus 88 ~~~~~al~~--gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~ 132 (362)
+++...... ...+++.. -+......+++.+. .+..++.+++
T Consensus 80 ~vl~~l~~~l~~~~iv~~~-~svk~~~~~~~~~~---~~~~~v~~hP 122 (298)
T 2pv7_A 80 ETIERLKPYLTENMLLADL-TSVKREPLAKMLEV---HTGAVLGLHP 122 (298)
T ss_dssp HHHHHHGGGCCTTSEEEEC-CSCCHHHHHHHHHH---CSSEEEEEEE
T ss_pred HHHHHHHhhcCCCcEEEEC-CCCCcHHHHHHHHh---cCCCEEeeCC
Confidence 666654322 12366653 23344444444433 3455665554
No 245
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.19 E-value=0.00037 Score=63.89 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=52.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---------CCCcccCCHHHHhcCCCCcEEE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---------PDAKVYGSYEALLDDKDIDAVY 78 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~e~l~~~~~D~V~ 78 (362)
.+||+|||+|.||..++..|.+. +.+|. +++++ ++.+.+.+ .|+. ..+...++++++ . +.|+|+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-g~~V~-~~~r~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~--~~D~Vi 75 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-GEAIN-VLARG-ATLQALQT-AGLRLTEDGATHTLPVRATHDAAAL-G--EQDVVI 75 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-TCCEE-EECCH-HHHHHHHH-TCEEEEETTEEEEECCEEESCHHHH-C--CCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEE-EEECh-HHHHHHHH-CCCEEecCCCeEEEeeeEECCHHHc-C--CCCEEE
Confidence 58999999999999999988776 45655 67775 55665543 3431 012345688774 3 599999
Q ss_pred EcCCCcccHHHH
Q 018020 79 LPLPTSMHVKWA 90 (362)
Q Consensus 79 i~~~~~~h~~~~ 90 (362)
+++|+....+.+
T Consensus 76 lavk~~~~~~~~ 87 (335)
T 3ghy_A 76 VAVKAPALESVA 87 (335)
T ss_dssp ECCCHHHHHHHH
T ss_pred EeCCchhHHHHH
Confidence 999996544443
No 246
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.18 E-value=0.0005 Score=64.12 Aligned_cols=68 Identities=21% Similarity=0.216 Sum_probs=52.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|+++...+ .+.++|+ ..+.+++++++. .|+|++++|..
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~-G~~V~-~~d~~~~~~~-~~~~~G~----~~~~~l~ell~~--aDvV~l~~Plt 258 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPF-DVHLH-YTDRHRLPES-VEKELNL----TWHATREDMYPV--CDVVTLNCPLH 258 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-TCEEE-EECSSCCCHH-HHHHHTC----EECSSHHHHGGG--CSEEEECSCCC
T ss_pred CCEEEEEeECHHHHHHHHHHHhC-CCEEE-EEcCCccchh-hHhhcCc----eecCCHHHHHhc--CCEEEEecCCc
Confidence 46899999999999999999876 68866 6788754332 3445564 345789999985 99999999964
No 247
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.16 E-value=0.0004 Score=63.50 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=51.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
.++|||||+|.||...+..+... +++|+ ++|+++++.+.. .++|+ .. .+++++++. .|+|++++|...
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~-~~~g~----~~-~~l~e~l~~--aDvVi~~vp~~~ 222 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF-GVQRF-LYTGRQPRPEEA-AEFQA----EF-VSTPELAAQ--SDFIVVACSLTP 222 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-TCCEE-EEESSSCCHHHH-HTTTC----EE-CCHHHHHHH--CSEEEECCCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEE-EECCCCcchhHH-HhcCc----ee-CCHHHHHhh--CCEEEEeCCCCh
Confidence 46899999999999999999866 67765 678776544433 34553 23 389999875 899999999753
No 248
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=97.16 E-value=0.0014 Score=63.01 Aligned_cols=74 Identities=11% Similarity=0.051 Sum_probs=54.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH----------cCCCC---------CCcccCCHHHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA----------NNFPP---------DAKVYGSYEAL 68 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~----------~~~~~---------~~~~~~~~~e~ 68 (362)
..||+|||+|.||...+..+.+. +++|+ ++|++++++++..+. .|.-. .....+|++ .
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G~~V~-l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 81 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-GHQVL-LYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-A 81 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEE-EECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-H
Confidence 56899999999999999988776 67755 799999988876553 22100 113456775 3
Q ss_pred hcCCCCcEEEEcCCCccc
Q 018020 69 LDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 69 l~~~~~D~V~i~~~~~~h 86 (362)
++ ++|+|+.++|....
T Consensus 82 ~~--~aDlVIeAVpe~~~ 97 (483)
T 3mog_A 82 LA--AADLVIEAASERLE 97 (483)
T ss_dssp GG--GCSEEEECCCCCHH
T ss_pred hc--CCCEEEEcCCCcHH
Confidence 55 49999999999854
No 249
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=96.24 E-value=6.2e-05 Score=63.81 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=49.9
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+||+|||+|.||..++..|.+. +.+|+ +++|+++ .+.+.. .++ ... +.+++++. .|+|++++|+..
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~-G~~V~-~~~r~~~-~~~~~~-~g~----~~~-~~~~~~~~--aDvVilav~~~~ 85 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC-GYSVV-FGSRNPQ-VSSLLP-RGA----EVL-CYSEAASR--SDVIVLAVHREH 85 (201)
Confidence 357899999999999999988766 56655 6788876 444432 343 334 77777764 999999999853
No 250
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.14 E-value=0.00086 Score=61.04 Aligned_cols=71 Identities=11% Similarity=0.018 Sum_probs=49.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc-------CCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN-------NFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
++||+|||+|.+|...+..+...+-++ +.++|+++++++..+... +.+..+..++|+ +.+++ .|+|+++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~--aD~Vi~a 79 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAG--ADVVIVT 79 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTT--CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC--CCEEEEe
Confidence 579999999999999888887664447 779999987766433221 222223334777 55664 9999999
Q ss_pred CC
Q 018020 81 LP 82 (362)
Q Consensus 81 ~~ 82 (362)
.+
T Consensus 80 ~g 81 (322)
T 1t2d_A 80 AG 81 (322)
T ss_dssp CS
T ss_pred CC
Confidence 73
No 251
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.14 E-value=0.00087 Score=60.91 Aligned_cols=81 Identities=22% Similarity=0.238 Sum_probs=45.2
Q ss_pred CCccCCceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-C-C--CCCccc-CCHHHHhcCCCCc
Q 018020 1 MATESQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-F-P--PDAKVY-GSYEALLDDKDID 75 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~-~--~~~~~~-~~~~e~l~~~~~D 75 (362)
|.| +++++||+|||+|++|...+..+...+-+.-+.++|+++++++..+.++. . + ..+++. +++ +.++ +.|
T Consensus 1 ~~m-~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~-~a~~--~aD 76 (318)
T 1y6j_A 1 MEM-VKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY-SDVK--DCD 76 (318)
T ss_dssp -------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG-GGGT--TCS
T ss_pred CCC-CCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCH-HHhC--CCC
Confidence 444 23468999999999999887777665433335589999887665444432 1 1 112222 333 3344 599
Q ss_pred EEEEcCCCcc
Q 018020 76 AVYLPLPTSM 85 (362)
Q Consensus 76 ~V~i~~~~~~ 85 (362)
+|+++.+.+.
T Consensus 77 vVii~~g~p~ 86 (318)
T 1y6j_A 77 VIVVTAGANR 86 (318)
T ss_dssp EEEECCCC--
T ss_pred EEEEcCCCCC
Confidence 9999887654
No 252
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.14 E-value=0.00051 Score=63.58 Aligned_cols=68 Identities=16% Similarity=0.120 Sum_probs=52.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcE-EEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAV-LSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~-vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++ |+ ++|+++...+ .+.++|+ ..+.+++++++. .|+|++++|..
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~-G~~~V~-~~d~~~~~~~-~~~~~g~----~~~~~l~ell~~--aDvV~l~~P~t 232 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPF-NPKELL-YYDYQALPKD-AEEKVGA----RRVENIEELVAQ--ADIVTVNAPLH 232 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG-CCSEEE-EECSSCCCHH-HHHHTTE----EECSSHHHHHHT--CSEEEECCCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCcEEE-EECCCccchh-HHHhcCc----EecCCHHHHHhc--CCEEEECCCCC
Confidence 46899999999999999999876 675 65 6887754333 3345563 345799999985 99999999985
No 253
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=97.13 E-value=0.0021 Score=58.06 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=70.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHHcCCC----CC--Cccc-----------------
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKANNFP----PD--AKVY----------------- 62 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~~~~~----~~--~~~~----------------- 62 (362)
++||||=|+|.||+..++++...+++++|+|-|+ +.+....+- +|+.. ++ ++.-
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~-kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMF-KYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHH-HCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHh-hhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 7999999999999998888877788999999997 555554442 23211 11 1111
Q ss_pred CCHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 63 GSYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 63 ~~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
.+++++ ..+.++|+|+-+|......+.+...+++| |.|++.-|.
T Consensus 82 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps 127 (337)
T 3v1y_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp SSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCC
T ss_pred cCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCC
Confidence 112221 11227999999999999999999999999 778887773
No 254
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.12 E-value=0.002 Score=61.53 Aligned_cols=79 Identities=14% Similarity=0.147 Sum_probs=54.0
Q ss_pred eeEEEEEeccHHH--HHHHHHHhcC---CCcEEEEEEcCCHHHHHHHHH-------HcCCCCCCcccCCHHHHhcCCCCc
Q 018020 8 AIRFGIIGAADIA--RKLSRAITLA---PNAVLSAVASRSLEKATNFAK-------ANNFPPDAKVYGSYEALLDDKDID 75 (362)
Q Consensus 8 ~~~v~iiG~G~~g--~~~~~~~~~~---~~~~vv~v~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~e~l~~~~~D 75 (362)
++||+|||+|++| ..++..+... ++.+|+ ++|+++++++...+ ..+.+..+..++|+++.+++ .|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~-L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~d--AD 79 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVT-LMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIID--AD 79 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEE-EECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT--CS
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEE-EEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCC--CC
Confidence 6899999999964 4555555432 355655 99999987664322 23444444556899888875 99
Q ss_pred EEEEcCCCcccHHH
Q 018020 76 AVYLPLPTSMHVKW 89 (362)
Q Consensus 76 ~V~i~~~~~~h~~~ 89 (362)
+|+++.|.......
T Consensus 80 ~VIiaagv~~~~~~ 93 (480)
T 1obb_A 80 FVINTAMVGGHTYL 93 (480)
T ss_dssp EEEECCCTTHHHHH
T ss_pred EEEECCCccccccc
Confidence 99999998654433
No 255
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=97.11 E-value=0.0052 Score=55.37 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=72.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHHcCCC----CC---------------Cccc--CC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKANNFP----PD---------------AKVY--GS 64 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~~~~~----~~---------------~~~~--~~ 64 (362)
++||||=|+|.||+-..+++...+++++|+|-|+ +.+.+..+- +|+.. ++ +.++ .+
T Consensus 1 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~-kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 1 MVRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMF-KYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CeEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHh-cccCCCCCCCCcEEEcCCEEEECCEEEEEEeecc
Confidence 3799999999999988888777788999999997 555554442 23211 00 1122 23
Q ss_pred HHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 65 YEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 65 ~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
++++ ..+.++|+|+-+|......+.+...+++| |.|++.-|.
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps 123 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPS 123 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCC
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCC
Confidence 4443 23458999999999999999999999999 778887773
No 256
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.10 E-value=0.0011 Score=60.06 Aligned_cols=78 Identities=17% Similarity=0.014 Sum_probs=49.6
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC--CC---CCCcccCCHHHHhcCCCCcEEEEc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN--FP---PDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~--~~---~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
++++||+|||+|.+|...+..+...+-+.-+.++|+++++++..+.+.. .+ ..+++..+..+.++ +.|+|+++
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~--~aDvViia 81 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCR--DADLVVIC 81 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTT--TCSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhC--CCCEEEEc
Confidence 3468999999999999887777654333335589999876664333221 11 12233333334455 49999999
Q ss_pred CCCcc
Q 018020 81 LPTSM 85 (362)
Q Consensus 81 ~~~~~ 85 (362)
.+...
T Consensus 82 ~~~~~ 86 (316)
T 1ldn_A 82 AGANQ 86 (316)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 87654
No 257
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=97.10 E-value=0.0053 Score=55.42 Aligned_cols=98 Identities=19% Similarity=0.162 Sum_probs=71.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC-HHHHHHHHHHcCCC----C---------------CCccc--CCH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS-LEKATNFAKANNFP----P---------------DAKVY--GSY 65 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~-~~~~~~~~~~~~~~----~---------------~~~~~--~~~ 65 (362)
++||||=|+|.||+...+++...+++++|+|-|.. .+....+ =+|+.. + .+.++ .++
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l-~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHL-LKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDA 82 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHH-HHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHH-hccCCCCCCcCCeEEEcCCEEEECCEEEEEEEeccc
Confidence 58999999999999988888777889999999853 3333322 223211 0 01222 344
Q ss_pred HHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 66 EAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 66 ~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+++ ..+.++|+|+-+|......+.+...+++| |.|++.-|.
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps 125 (338)
T 3lvf_P 83 SKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPA 125 (338)
T ss_dssp GGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred ccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCC
Confidence 443 23458999999999999999999999999 778887774
No 258
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.09 E-value=0.00092 Score=61.69 Aligned_cols=67 Identities=21% Similarity=0.320 Sum_probs=51.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|++... ..+.+.|+ .+.+++++++. .|+|++++|...
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~f-G~~V~-~~d~~~~~--~~~~~~g~-----~~~~l~ell~~--aDvV~l~~Plt~ 242 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGF-RARIR-VFDPWLPR--SMLEENGV-----EPASLEDVLTK--SDFIFVVAAVTS 242 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTS-CCEEE-EECSSSCH--HHHHHTTC-----EECCHHHHHHS--CSEEEECSCSSC
T ss_pred CCEEEEecCCcccHHHHHhhhhC-CCEEE-EECCCCCH--HHHhhcCe-----eeCCHHHHHhc--CCEEEEcCcCCH
Confidence 35899999999999999999876 78876 68887432 22344553 35799999986 999999999753
No 259
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.09 E-value=0.0013 Score=59.85 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=51.1
Q ss_pred CCccCC-ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CC---CCCcccCCHHHHhcCCCCc
Q 018020 1 MATESQ-AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FP---PDAKVYGSYEALLDDKDID 75 (362)
Q Consensus 1 m~~~~~-~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~---~~~~~~~~~~e~l~~~~~D 75 (362)
|++.+. +++||+|||+|++|...+..+...+-+.-+.++|+++++++..+.++. .. ..+++..+..+.++ +.|
T Consensus 1 ~~~~~~~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~--~aD 78 (326)
T 2zqz_A 1 MASITDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAK--DAD 78 (326)
T ss_dssp -----CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGG--GCS
T ss_pred CCccccCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhC--CCC
Confidence 444433 458999999999999877766554444445589999988876555431 10 12234333344455 499
Q ss_pred EEEEcCCCccc
Q 018020 76 AVYLPLPTSMH 86 (362)
Q Consensus 76 ~V~i~~~~~~h 86 (362)
+|+++.+...-
T Consensus 79 vVii~ag~~~k 89 (326)
T 2zqz_A 79 LVVITAGAPQK 89 (326)
T ss_dssp EEEECCCCC--
T ss_pred EEEEcCCCCCC
Confidence 99999876543
No 260
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.08 E-value=0.00057 Score=62.37 Aligned_cols=106 Identities=15% Similarity=0.147 Sum_probs=66.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc--
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM-- 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~-- 85 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|+++...+ .+.++|. .+.+++++++. .|+|++++|...
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~-G~~V~-~~d~~~~~~~-~~~~~g~-----~~~~l~ell~~--aDvV~l~~P~t~~t 214 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW-GATLQ-YHEAKALDTQ-TEQRLGL-----RQVACSELFAS--SDFILLALPLNADT 214 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS-CCEEE-EECSSCCCHH-HHHHHTE-----EECCHHHHHHH--CSEEEECCCCSTTT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEE-EECCCCCcHh-HHHhcCc-----eeCCHHHHHhh--CCEEEEcCCCCHHH
Confidence 46899999999999999999877 78866 6888763332 2334453 24589999985 899999999542
Q ss_pred cHHH---HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 018020 86 HVKW---AISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV 125 (362)
Q Consensus 86 h~~~---~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~ 125 (362)
+.-+ ....++.| .+++.-- ...+-+-.+|.++.++.++
T Consensus 215 ~~li~~~~l~~mk~g-ailIN~a-rg~~vd~~aL~~aL~~g~i 255 (330)
T 4e5n_A 215 LHLVNAELLALVRPG-ALLVNPC-RGSVVDEAAVLAALERGQL 255 (330)
T ss_dssp TTCBCHHHHTTSCTT-EEEEECS-CGGGBCHHHHHHHHHHTSE
T ss_pred HHHhCHHHHhhCCCC-cEEEECC-CCchhCHHHHHHHHHhCCc
Confidence 2111 12222333 3555421 1233444455665555443
No 261
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.07 E-value=0.00076 Score=61.63 Aligned_cols=105 Identities=18% Similarity=0.259 Sum_probs=67.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc--c
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS--M 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~--~ 85 (362)
-.+|||||+|.||+..+..++.. +++|+ ++|++++.... +.+. .+.+++++++. .|+|++++|.. .
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~-G~~V~-~~d~~~~~~~~---~~g~-----~~~~l~ell~~--aDvV~l~~P~t~~t 208 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF-GMKVL-CYDVVKREDLK---EKGC-----VYTSLDELLKE--SDVISLHVPYTKET 208 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCHHHH---HTTC-----EECCHHHHHHH--CSEEEECCCCCTTT
T ss_pred CceEEEECcCHHHHHHHHHHHHC-cCEEE-EECCCcchhhH---hcCc-----eecCHHHHHhh--CCEEEEeCCCChHH
Confidence 46899999999999999999877 78876 68887654421 3443 35579999985 99999999953 2
Q ss_pred cH---HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE
Q 018020 86 HV---KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ 126 (362)
Q Consensus 86 h~---~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~ 126 (362)
+. .-....++.| .+++.-- ...+-+.+.|.++.++.++.
T Consensus 209 ~~li~~~~l~~mk~g-ailIN~a-Rg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 209 HHMINEERISLMKDG-VYLINTA-RGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp TTCBCHHHHHHSCTT-EEEEECS-CGGGBCHHHHHHHHHTTCEE
T ss_pred HHhhCHHHHhhCCCC-cEEEECC-CCcccCHHHHHHHHHhCCce
Confidence 21 1222333333 4555421 22344555566666554433
No 262
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.06 E-value=0.00089 Score=58.59 Aligned_cols=92 Identities=15% Similarity=0.079 Sum_probs=55.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH-------------------HHHHHHHHHcC-CCCCCcc------
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL-------------------EKATNFAKANN-FPPDAKV------ 61 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~-------------------~~~~~~~~~~~-~~~~~~~------ 61 (362)
..||.|||+|.+|...+..|... ++.-+.++|++. .+++.++++.. +.|++.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 109 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 109 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 46899999999999999998776 553345888876 56666555431 1122111
Q ss_pred cC--CHHHHhcCCCCcEEEEcCCCccc-HHHHHHHHHcCCeEEE
Q 018020 62 YG--SYEALLDDKDIDAVYLPLPTSMH-VKWAISVAQKKKHLLM 102 (362)
Q Consensus 62 ~~--~~~e~l~~~~~D~V~i~~~~~~h-~~~~~~al~~gk~V~~ 102 (362)
++ +++++++ +.|+|+.++++..- ..+...|.+.|++++.
T Consensus 110 ~~~~~~~~~~~--~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~ 151 (249)
T 1jw9_B 110 LDDAELAALIA--EHDLVLDCTDNVAVRNQLNAGCFAAKVPLVS 151 (249)
T ss_dssp CCHHHHHHHHH--TSSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHhHHHHHHh--CCCEEEEeCCCHHHHHHHHHHHHHcCCCEEE
Confidence 11 2344555 37888887776432 3333344455655443
No 263
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.05 E-value=0.0019 Score=61.16 Aligned_cols=76 Identities=17% Similarity=0.182 Sum_probs=52.6
Q ss_pred CceeEEEEEeccHH--HHHHHHHHhcCCC--cEEEEEEcCCHHHHHHHHHHcC----CCCCCcccCCHHHHhcCCCCcEE
Q 018020 6 QAAIRFGIIGAADI--ARKLSRAITLAPN--AVLSAVASRSLEKATNFAKANN----FPPDAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 6 ~~~~~v~iiG~G~~--g~~~~~~~~~~~~--~~vv~v~d~~~~~~~~~~~~~~----~~~~~~~~~~~~e~l~~~~~D~V 77 (362)
|+++||+|||+|++ |...+..+...+. -+ +.++|+++++++....... .+..+..++|+++.+++ .|+|
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~ge-V~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~d--ADfV 79 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSGT-VALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSA--ADIV 79 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCEE-EEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTT--CSEE
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCCe-EEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcC--CCEE
Confidence 35789999999996 5667666654331 25 4599999987665432211 11234567899999986 9999
Q ss_pred EEcCCCc
Q 018020 78 YLPLPTS 84 (362)
Q Consensus 78 ~i~~~~~ 84 (362)
+++.++.
T Consensus 80 I~airvG 86 (450)
T 3fef_A 80 IISILPG 86 (450)
T ss_dssp EECCCSS
T ss_pred EeccccC
Confidence 9999864
No 264
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.04 E-value=0.0014 Score=59.47 Aligned_cols=78 Identities=12% Similarity=0.071 Sum_probs=50.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-C---CCCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-F---PPDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
+++||+|||+|++|...+..+...+-+.-+.++|+++++++..+.++. . ...+++..+..+.++ +.|+|+++.+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~--~aDvVii~ag 81 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCK--DADLVVITAG 81 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGT--TCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhC--CCCEEEECCC
Confidence 469999999999999877766554444445589999988876544431 1 012234333344455 4999999987
Q ss_pred Cccc
Q 018020 83 TSMH 86 (362)
Q Consensus 83 ~~~h 86 (362)
...-
T Consensus 82 ~~~~ 85 (318)
T 1ez4_A 82 APQK 85 (318)
T ss_dssp C---
T ss_pred CCCC
Confidence 6543
No 265
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.04 E-value=0.0015 Score=59.26 Aligned_cols=78 Identities=12% Similarity=0.031 Sum_probs=49.6
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC--CC---CCCcccCCHHHHhcCCCCcEEEEc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN--FP---PDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~--~~---~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
|+++||+|||+|++|...+..+...+-+.-+.++|+++++++..+.++. .+ ..+.+..+..+.++ +.|+|+++
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~--~aDvVvi~ 81 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCH--DADLVVIC 81 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGT--TCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhC--CCCEEEEC
Confidence 4578999999999999877766554333445689999877664322210 10 11233333344455 49999998
Q ss_pred CCCcc
Q 018020 81 LPTSM 85 (362)
Q Consensus 81 ~~~~~ 85 (362)
.+...
T Consensus 82 ag~~~ 86 (317)
T 3d0o_A 82 AGAAQ 86 (317)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 87654
No 266
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=97.03 E-value=0.0024 Score=57.79 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=70.9
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH-HHHHHHHHHcCCC----C---------------CCccc--CC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL-EKATNFAKANNFP----P---------------DAKVY--GS 64 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~-~~~~~~~~~~~~~----~---------------~~~~~--~~ 64 (362)
.++||||=|+|.||+-..+++...+++++|+|-|+.. +.+..+ =+|+.. + .+.++ .+
T Consensus 3 ~~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~l-lkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~d 81 (345)
T 4dib_A 3 AMTRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPSETLAHL-IKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRD 81 (345)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHH-HHEETTTEECSSCEEECSSEEEETTEEEEEECCSC
T ss_pred ccEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHH-hcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCC
Confidence 3689999999999999888887778899999999742 222222 222111 0 11222 34
Q ss_pred HHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 65 YEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 65 ~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
++++ ..+.++|+|+-+|......+.+...+++| |.|++.-|.
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps 125 (345)
T 4dib_A 82 PKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPG 125 (345)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred hhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCC
Confidence 4443 23457999999999999999999999999 778887773
No 267
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.03 E-value=0.0014 Score=59.31 Aligned_cols=78 Identities=13% Similarity=0.186 Sum_probs=52.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCC---CC---cccCCHHHHhcCCCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPP---DA---KVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~---~~---~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
+|||+|||+|.||..++..|. .+.+|. +++|++++++.+.+. |+.. +. ..+....+. ..+.|+|++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~--~g~~V~-~~~r~~~~~~~l~~~-G~~~~~~~~~~~~~~~~~~~~--~~~~D~vilav 75 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS--LYHDVT-VVTRRQEQAAAIQSE-GIRLYKGGEEFRADCSADTSI--NSDFDLLVVTV 75 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH--TTSEEE-EECSCHHHHHHHHHH-CEEEEETTEEEEECCEEESSC--CSCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHh--cCCceE-EEECCHHHHHHHHhC-CceEecCCCeecccccccccc--cCCCCEEEEEe
Confidence 479999999999999988887 467765 678998888877654 4320 00 000000122 23689999999
Q ss_pred CCcccHHHHH
Q 018020 82 PTSMHVKWAI 91 (362)
Q Consensus 82 ~~~~h~~~~~ 91 (362)
++....+.+.
T Consensus 76 K~~~~~~~l~ 85 (307)
T 3ego_A 76 KQHQLQSVFS 85 (307)
T ss_dssp CGGGHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9976655553
No 268
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.03 E-value=0.0018 Score=59.00 Aligned_cols=72 Identities=15% Similarity=0.085 Sum_probs=49.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH-------cCCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA-------NNFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
++||+|||+|.+|...+..+...+.++ +.++|+++++++..+.. ...+..+..++|+ +.+++ .|+|+++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~--aD~VI~a 89 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN--SDVVIIT 89 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT--CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC--CCEEEEc
Confidence 479999999999999888877664347 67999998776643211 1222223445777 55654 9999999
Q ss_pred CCC
Q 018020 81 LPT 83 (362)
Q Consensus 81 ~~~ 83 (362)
.+.
T Consensus 90 vg~ 92 (328)
T 2hjr_A 90 AGV 92 (328)
T ss_dssp CSC
T ss_pred CCC
Confidence 743
No 269
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=97.00 E-value=0.0029 Score=60.50 Aligned_cols=76 Identities=11% Similarity=0.055 Sum_probs=51.4
Q ss_pred ceeEEEEEeccHH-HHHHHHHHhcC-CC--cEEEEEEcCCHHHHHHHH---H----HcCCCCCCcccCCHHHHhcCCCCc
Q 018020 7 AAIRFGIIGAADI-ARKLSRAITLA-PN--AVLSAVASRSLEKATNFA---K----ANNFPPDAKVYGSYEALLDDKDID 75 (362)
Q Consensus 7 ~~~~v~iiG~G~~-g~~~~~~~~~~-~~--~~vv~v~d~~~~~~~~~~---~----~~~~~~~~~~~~~~~e~l~~~~~D 75 (362)
+++||+|||+|+. +..++..+... ++ ..=+.++|+++++++... + ..+.+..+..++|+++.+++ .|
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~--AD 104 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD--VD 104 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS--CS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcC--CC
Confidence 4689999999996 44455444333 12 233559999998766432 2 23444444556799888885 99
Q ss_pred EEEEcCCCc
Q 018020 76 AVYLPLPTS 84 (362)
Q Consensus 76 ~V~i~~~~~ 84 (362)
+|+++.|..
T Consensus 105 ~VViaag~~ 113 (472)
T 1u8x_X 105 FVMAHIRVG 113 (472)
T ss_dssp EEEECCCTT
T ss_pred EEEEcCCCc
Confidence 999999984
No 270
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.00 E-value=0.0026 Score=57.71 Aligned_cols=74 Identities=20% Similarity=0.235 Sum_probs=48.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcC--CC--CCCcc-cCCHHHHhcCCCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANN--FP--PDAKV-YGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~--~~--~~~~~-~~~~~e~l~~~~~D~V~i~~~ 82 (362)
|||+|||+|.||...+..+...... + +.++|+++++++..+..+. .+ ....+ .+++ +.++ +.|+|+++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~-~~~~--~aDvViiav~ 76 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFARE-MVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-ADLK--GSDVVIVAAG 76 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSE-EEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-GGGT--TCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCe-EEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCH-HHhC--CCCEEEEccC
Confidence 5899999999999888877654222 5 4488999988777654321 00 01122 2454 3344 5999999999
Q ss_pred Cccc
Q 018020 83 TSMH 86 (362)
Q Consensus 83 ~~~h 86 (362)
....
T Consensus 77 ~~~~ 80 (319)
T 1a5z_A 77 VPQK 80 (319)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7653
No 271
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.00095 Score=62.09 Aligned_cols=99 Identities=10% Similarity=0.172 Sum_probs=66.0
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcC----CC--cEEEEEEcCCHHH-----HHHHHHH---------cCCCCCCcccCCH
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLA----PN--AVLSAVASRSLEK-----ATNFAKA---------NNFPPDAKVYGSY 65 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~----~~--~~vv~v~d~~~~~-----~~~~~~~---------~~~~~~~~~~~~~ 65 (362)
.+++||+|||+|.||..++..+.+. +. -.-|-++.++++. .+.+... ..+|++..+.+|+
T Consensus 32 ~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl 111 (391)
T 4fgw_A 32 EKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDL 111 (391)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCH
T ss_pred CCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCH
Confidence 4689999999999999988777532 21 1224467665432 2323221 1344566778999
Q ss_pred HHHhcCCCCcEEEEcCCCcccHHHHHHHH---HcCCeE-EEeCCC
Q 018020 66 EALLDDKDIDAVYLPLPTSMHVKWAISVA---QKKKHL-LMEKPM 106 (362)
Q Consensus 66 ~e~l~~~~~D~V~i~~~~~~h~~~~~~al---~~gk~V-~~EKP~ 106 (362)
++.+++ .|+|++++|...-.+++.+.. +.++.+ .|-|-+
T Consensus 112 ~~al~~--ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 112 IDSVKD--VDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp HHHHTT--CSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred HHHHhc--CCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 999986 999999999988777777654 334444 355655
No 272
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.00 E-value=0.0015 Score=59.10 Aligned_cols=73 Identities=12% Similarity=0.037 Sum_probs=50.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc-------CCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN-------NFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
++||+|||+|.+|...+..+...+.++ +.++|+++++++..+.+. +.+..+..++|+ +.+++ .|+|+++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~--aD~Vi~a 77 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN--SDVIVVT 77 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT--CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC--CCEEEEc
Confidence 369999999999998888887665457 779999887776543332 111112334777 55654 9999998
Q ss_pred CCCc
Q 018020 81 LPTS 84 (362)
Q Consensus 81 ~~~~ 84 (362)
.+.+
T Consensus 78 ~g~p 81 (309)
T 1ur5_A 78 SGAP 81 (309)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 7544
No 273
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.99 E-value=0.004 Score=58.62 Aligned_cols=81 Identities=11% Similarity=0.147 Sum_probs=57.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHH--HHhc---CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYE--ALLD---DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~--e~l~---~~~~D~V~i~~~ 82 (362)
+++|.|||+|.+|+..++.|.+. +.+++ ++|.++++.+.+. +.|++ .++.|.. ++|. -.+.|+|+++++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~vv-vId~d~~~v~~~~-~~g~~---vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVKMV-VLDHDPDHIETLR-KFGMK---VFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEE-EEECCHHHHHHHH-HTTCC---CEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEE-EEECCHHHHHHHH-hCCCe---EEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 57899999999999999999876 67766 6799999888775 46654 3443332 2332 246899999999
Q ss_pred CcccHHHHHHHH
Q 018020 83 TSMHVKWAISVA 94 (362)
Q Consensus 83 ~~~h~~~~~~al 94 (362)
+......+...+
T Consensus 78 ~~~~n~~i~~~a 89 (413)
T 3l9w_A 78 DPQTNLQLTEMV 89 (413)
T ss_dssp SHHHHHHHHHHH
T ss_pred ChHHHHHHHHHH
Confidence 876544444333
No 274
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=96.97 E-value=0.0014 Score=59.34 Aligned_cols=72 Identities=13% Similarity=0.107 Sum_probs=50.3
Q ss_pred eEEEEEeccHHHHHHHHHHhcCC-CcEEEEEEcCCHHHHHHHHHHc-------CCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 9 IRFGIIGAADIARKLSRAITLAP-NAVLSAVASRSLEKATNFAKAN-------NFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~-~~~vv~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
|||+|||+|.+|...+..+...+ +.+|+ ++|+++++++..+.+. ..+..+..++|+++ +++ .|+|+++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~-l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~--aDvViia 76 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELV-LLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TAN--SDIVIIT 76 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTT--CSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCC--CCEEEEe
Confidence 58999999999999888876642 56655 8899888777554321 11112234578877 654 9999999
Q ss_pred CCCc
Q 018020 81 LPTS 84 (362)
Q Consensus 81 ~~~~ 84 (362)
+|.+
T Consensus 77 v~~p 80 (310)
T 1guz_A 77 AGLP 80 (310)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 8764
No 275
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.96 E-value=0.0071 Score=57.85 Aligned_cols=74 Identities=14% Similarity=0.189 Sum_probs=51.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH----------cC-C------CCCCcccCCHHHHh
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA----------NN-F------PPDAKVYGSYEALL 69 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~----------~~-~------~~~~~~~~~~~e~l 69 (362)
...||+|||+|.||...+..+.+. +++|+ ++|+++++++...+. .| + .....+.+|++ .+
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~-G~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-~~ 112 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARV-GISVV-AVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-EL 112 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT-TCEEE-EECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG-GG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC-CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH-HH
Confidence 346899999999999999988766 67765 789999877654331 01 0 00013456773 45
Q ss_pred cCCCCcEEEEcCCCcc
Q 018020 70 DDKDIDAVYLPLPTSM 85 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~ 85 (362)
+ ++|+|++++|...
T Consensus 113 ~--~aDlVIeaVpe~~ 126 (463)
T 1zcj_A 113 S--TVDLVVEAVFEDM 126 (463)
T ss_dssp T--TCSEEEECCCSCH
T ss_pred C--CCCEEEEcCCCCH
Confidence 4 4999999999865
No 276
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.95 E-value=0.0029 Score=57.33 Aligned_cols=76 Identities=16% Similarity=0.190 Sum_probs=47.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHH--HcCCC--CCCcc--cCCHHHHhcCCCCcEEEE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAK--ANNFP--PDAKV--YGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~--~~~~~--~~~~~--~~~~~e~l~~~~~D~V~i 79 (362)
++|||+|||+|.+|..++..+.....+ +|+ ++|+++++++..+. ..+.+ ....+ .++++ .+. +.|+|++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~aD~Vii 81 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIV-LEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE-ICR--DADMVVI 81 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG-GGT--TCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHH-HhC--CCCEEEE
Confidence 458999999999999988888766323 654 88999877652221 11211 01122 23543 344 5999999
Q ss_pred cCCCccc
Q 018020 80 PLPTSMH 86 (362)
Q Consensus 80 ~~~~~~h 86 (362)
+++....
T Consensus 82 ~v~~~~~ 88 (319)
T 1lld_A 82 TAGPRQK 88 (319)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 9965543
No 277
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.95 E-value=0.0011 Score=60.28 Aligned_cols=72 Identities=13% Similarity=0.064 Sum_probs=48.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH-------cCCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA-------NNFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
++||+|||+|.||...+..+...+..+ +.++|+++++++..+.+ .+.+..+...+++ +.++ +.|+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~--~aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADIS--GSDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT--TCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhC--CCCEEEEe
Confidence 589999999999999888886653237 66899988766653211 1112223344777 5555 49999999
Q ss_pred CCC
Q 018020 81 LPT 83 (362)
Q Consensus 81 ~~~ 83 (362)
.+.
T Consensus 80 vg~ 82 (317)
T 2ewd_A 80 ASI 82 (317)
T ss_dssp CCC
T ss_pred CCC
Confidence 843
No 278
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.95 E-value=0.0018 Score=57.96 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=48.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH-------cCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA-------NNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
|||+|||+|.+|...+..+...+.+.-+.++|+++++++..+.+ +..+..+...+| .+.+++ .|+|+++.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~--aDiVViaa 77 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG--SEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT--CSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC--CCEEEECC
Confidence 58999999999998888776654443355899999876522111 222222333457 566664 99999986
Q ss_pred CCc
Q 018020 82 PTS 84 (362)
Q Consensus 82 ~~~ 84 (362)
+.+
T Consensus 78 g~~ 80 (294)
T 1oju_A 78 GLA 80 (294)
T ss_dssp CCC
T ss_pred CCC
Confidence 544
No 279
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.94 E-value=0.0008 Score=60.89 Aligned_cols=120 Identities=13% Similarity=0.118 Sum_probs=77.0
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC---HHHHHHHHHHcC----CCCCCcccCCHH---HHhcCCCCcEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRS---LEKATNFAKANN----FPPDAKVYGSYE---ALLDDKDIDAVY 78 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~---~~~~~~~~~~~~----~~~~~~~~~~~~---e~l~~~~~D~V~ 78 (362)
-++.|+|+|.+|+..+..|.+. ++.-+.|++|+ .+++++++++++ ..-.+.-+++.+ +.+. +.|+|+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~--~aDiII 231 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD-GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA--ESVIFT 231 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--TCSEEE
T ss_pred CEEEEECCChHHHHHHHHHHHC-CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc--CCCEEE
Confidence 4799999999999999988876 66334588999 899988877643 110011234433 4455 499999
Q ss_pred EcCCCcccHH-----H-HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeeccc
Q 018020 79 LPLPTSMHVK-----W-AISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVH 135 (362)
Q Consensus 79 i~~~~~~h~~-----~-~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~ 135 (362)
.+||...+.. + -...++. ..+++| +..++.+ -.+++.|++.|+++.-|.....
T Consensus 232 NaTp~Gm~~~~~~~p~~~~~~l~~-~~~V~D--lvY~P~~-T~ll~~A~~~G~~~~~Gl~MLv 290 (315)
T 3tnl_A 232 NATGVGMKPFEGETLLPSADMLRP-ELIVSD--VVYKPTK-TRLLEIAEEQGCQTLNGLGMML 290 (315)
T ss_dssp ECSSTTSTTSTTCCSCCCGGGCCT-TCEEEE--SCCSSSS-CHHHHHHHHTTCEEECSHHHHH
T ss_pred ECccCCCCCCCCCCCCCcHHHcCC-CCEEEE--eccCCCC-CHHHHHHHHCCCeEeCcHHHHH
Confidence 9999654422 1 1233433 355555 3334333 3567788889998877755444
No 280
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.93 E-value=0.00039 Score=62.22 Aligned_cols=63 Identities=19% Similarity=0.257 Sum_probs=49.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..+..++.. +++|+ ++|++++..+. ....++++++++. .|+|++++|..
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~-~~dr~~~~~~~----------~~~~~~l~ell~~--aDiV~l~~P~t 184 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAF-GMRVI-AYTRSSVDQNV----------DVISESPADLFRQ--SDFVLIAIPLT 184 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCEEE-EECSSCCCTTC----------SEECSSHHHHHHH--CSEEEECCCCC
T ss_pred cchheeeccCchhHHHHHHHHhh-CcEEE-EEecccccccc----------ccccCChHHHhhc--cCeEEEEeecc
Confidence 36899999999999999999877 78877 57887543221 2456799999986 99999999953
No 281
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=96.93 E-value=0.001 Score=61.37 Aligned_cols=90 Identities=13% Similarity=0.058 Sum_probs=63.6
Q ss_pred eEEEEEec-cHHHHHHHH-HHhcCC--CcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC---CHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSR-AITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYG---SYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~-~~~~~~--~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~e~l~~~~~D~V~i~~ 81 (362)
|||||||+ |..|..+++ .|.++| ..+++.+.+++ ..+.+.+ ++- .. ..+. +.++ ++ ++|+|+.|+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~--aG~~~~~-~~~-~~-~~~~~~~~~~~-~~--~~Dvvf~a~ 72 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ--IGVPAPN-FGK-DA-GMLHDAFDIES-LK--QLDAVITCQ 72 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS--TTSBCCC-SSS-CC-CBCEETTCHHH-HT--TCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc--cCcCHHH-hCC-Cc-eEEEecCChhH-hc--cCCEEEECC
Confidence 68999996 778999998 888888 68888887654 2222111 210 01 1222 3333 33 699999999
Q ss_pred CCcccHHHHHHHHHcCC-eEEEeCCC
Q 018020 82 PTSMHVKWAISVAQKKK-HLLMEKPM 106 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk-~V~~EKP~ 106 (362)
|.....+++..++++|. .++++-|-
T Consensus 73 ~~~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 73 GGSYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred ChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 99999999999999995 57777664
No 282
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.92 E-value=0.0031 Score=56.84 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=46.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-C-C--CCCccc-CCHHHHhcCCCCcEEEEcCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-F-P--PDAKVY-GSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~-~--~~~~~~-~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+||+|||+|.+|...+..+...+.+.-+.++|+++++++..+.+.. . + ...++. +++ +.++ +.|+|+++.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a~~--~aDvVIi~~~~ 77 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-SELA--DAQVVILTAGA 77 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-GGGT--TCSEEEECC--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-HHhC--CCCEEEEcCCC
Confidence 4899999999999988887665333235589999987776555432 1 0 112222 344 3344 59999999976
Q ss_pred ccc
Q 018020 84 SMH 86 (362)
Q Consensus 84 ~~h 86 (362)
..+
T Consensus 78 ~~~ 80 (304)
T 2v6b_A 78 NQK 80 (304)
T ss_dssp ---
T ss_pred CCC
Confidence 554
No 283
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.91 E-value=0.00083 Score=59.36 Aligned_cols=118 Identities=17% Similarity=0.229 Sum_probs=73.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC-CCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP-PDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~-~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
.-|+.|+|+|..++..+..+.+. ++.-+.|++|+.++++.+++.++.. +...+.... +.+ .+.|+|+.+||-..+
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~-g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~-~~~--~~~dliiNaTp~Gm~ 200 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEA-GIASITLCDPSTARMGAVCELLGNGFPGLTVSTQF-SGL--EDFDLVANASPVGMG 200 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCC-SCS--TTCSEEEECSSTTCS
T ss_pred cCeEEEEecHHHHHHHHHHHHHh-CCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhh-hhh--hcccccccCCccccC
Confidence 35799999999999888888877 4444569999999999988876410 111111111 112 358999999996543
Q ss_pred HH----HH---HHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeec
Q 018020 87 VK----WA---ISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMW 133 (362)
Q Consensus 87 ~~----~~---~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 133 (362)
.. +- ...++ ..++++| +..++.+ -.+++.|++.|.++.-|...
T Consensus 201 ~~~~~p~~~~~~~~l~-~~~~v~D--~vY~P~~-T~ll~~A~~~G~~~~~Gl~M 250 (269)
T 3tum_A 201 TRAELPLSAALLATLQ-PDTLVAD--VVTSPEI-TPLLNRARQVGCRIQTGPEM 250 (269)
T ss_dssp TTCCCSSCHHHHHTCC-TTSEEEE--CCCSSSS-CHHHHHHHHHTCEEECHHHH
T ss_pred CCCCCCCChHHHhccC-CCcEEEE--EccCCCC-CHHHHHHHHCcCEEECcHHH
Confidence 21 11 12222 2345555 3333332 35677888888887766444
No 284
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=96.89 E-value=0.00091 Score=61.94 Aligned_cols=94 Identities=7% Similarity=-0.024 Sum_probs=64.8
Q ss_pred ceeEEEEEec-cHHHHHHHH-HHhcCC--CcEEEEEEcCCHHHHHHHHHHc-CCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 7 AAIRFGIIGA-ADIARKLSR-AITLAP--NAVLSAVASRSLEKATNFAKAN-NFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~-~~~~~~--~~~vv~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
.++||||||+ |..|..+++ .|.++| ..+++.+.+++ ..+.+.+ + +....+.-.++.++ ++ ++|+|+.|+
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~--aG~~~~~-~~~~~~~v~~~~~~~~-~~--~vDvvf~a~ 76 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN--AGGKAPS-FAKNETTLKDATSIDD-LK--KCDVIITCQ 76 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC--TTSBCCT-TCCSCCBCEETTCHHH-HH--TCSEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh--cCCCHHH-cCCCceEEEeCCChhH-hc--CCCEEEECC
Confidence 4799999997 777999998 888888 68888877653 2221111 2 11100111123334 33 599999999
Q ss_pred CCcccHHHHHHHHHcCC-eEEEeCCC
Q 018020 82 PTSMHVKWAISVAQKKK-HLLMEKPM 106 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk-~V~~EKP~ 106 (362)
|.....+++..++++|. .++++-|-
T Consensus 77 ~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 77 GGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred ChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 99999999999999995 47777664
No 285
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.87 E-value=0.00027 Score=64.22 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=49.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|++++....+ . ....+.+++++++. .|+|++++|..
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~-~~dr~~~~~~~~----~---~~~~~~~l~ell~~--aDvV~l~lPlt 205 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF-GMKVL-GVSRSGRERAGF----D---QVYQLPALNKMLAQ--ADVIVSVLPAT 205 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCCCTTC----S---EEECGGGHHHHHHT--CSEEEECCCCC
T ss_pred cceEEEEEECHHHHHHHHHHHhC-CCEEE-EEcCChHHhhhh----h---cccccCCHHHHHhh--CCEEEEeCCCC
Confidence 46899999999999999999877 78876 678875322111 1 01235789999986 99999999964
No 286
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.87 E-value=0.0048 Score=58.66 Aligned_cols=76 Identities=13% Similarity=0.207 Sum_probs=52.2
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHH--------HHHHcCCC--------CCCcccCCHHHHh
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATN--------FAKANNFP--------PDAKVYGSYEALL 69 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~--------~~~~~~~~--------~~~~~~~~~~e~l 69 (362)
+...||+|||+|.||...+..+.+. +++|+ ++|++++++.. +.++-.++ ......+|++ .+
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~a-G~~V~-l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al 128 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLA-GIETF-LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KL 128 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHC-CCeEE-EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HH
Confidence 3457899999999999999988876 78866 78999885432 21211111 1123567775 44
Q ss_pred cCCCCcEEEEcCCCccc
Q 018020 70 DDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~h 86 (362)
+ ++|+|+.++|....
T Consensus 129 ~--~aDlVIeAVpe~~~ 143 (460)
T 3k6j_A 129 S--NCDLIVESVIEDMK 143 (460)
T ss_dssp T--TCSEEEECCCSCHH
T ss_pred c--cCCEEEEcCCCCHH
Confidence 4 59999999998654
No 287
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.86 E-value=0.0018 Score=60.36 Aligned_cols=73 Identities=14% Similarity=0.061 Sum_probs=53.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCC--cccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDA--KVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|+|||+|.+|...+..++.. +++|+ ++|+++++++.+.+.+|..-.+ .-..++++++. ++|+|+.+++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~-~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~--~aDvVi~~~~~p 242 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM-GATVT-VLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK--RADLVIGAVLVP 242 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH--HCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEE-EEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc--CCCEEEECCCcC
Confidence 46899999999999999999887 57755 7899999888877767642000 01345667776 499999987543
No 288
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.85 E-value=0.0046 Score=49.46 Aligned_cols=109 Identities=9% Similarity=0.047 Sum_probs=67.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC-HHHHHHHHHHc--CCCCCCccc---CCHHHHh--cCCCCcEEEE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS-LEKATNFAKAN--NFPPDAKVY---GSYEALL--DDKDIDAVYL 79 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~-~~~~~~~~~~~--~~~~~~~~~---~~~~e~l--~~~~~D~V~i 79 (362)
+.+|.|+|+|.+|...+..|.+. +.+++ ++|++ +++.+.+.+.+ |+. .++ ++.+.+. .-.+.|+|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-g~~V~-vid~~~~~~~~~~~~~~~~~~~---~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-GQNVT-VISNLPEDDIKQLEQRLGDNAD---VIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEE-EEECCCHHHHHHHHHHHCTTCE---EEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEE-EEECCChHHHHHHHHhhcCCCe---EEEcCCCCHHHHHHcChhhCCEEEE
Confidence 56899999999999999999876 57767 55675 66666665543 322 122 2333332 1246999999
Q ss_pred cCCCcccHHHHHHHH-Hc-C-CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 80 PLPTSMHVKWAISVA-QK-K-KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 80 ~~~~~~h~~~~~~al-~~-g-k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
++++......+...+ +. + .+|++. +.+.+..+.+ ++.|....
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~---~~~~~~~~~l----~~~G~~~v 122 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSDVKTVLA---VSDSKNLNKI----KMVHPDII 122 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSSSCEEEE---CSSGGGHHHH----HTTCCSEE
T ss_pred ecCChHHHHHHHHHHHHHCCCCEEEEE---ECCHHHHHHH----HHcCCCEE
Confidence 999876554444443 33 3 567762 3444444333 45666543
No 289
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.84 E-value=0.002 Score=58.56 Aligned_cols=93 Identities=16% Similarity=0.126 Sum_probs=60.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC-----C-C-----CCcccCCHHHHhcCCCCcE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF-----P-P-----DAKVYGSYEALLDDKDIDA 76 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~-----~-~-----~~~~~~~~~e~l~~~~~D~ 76 (362)
+|||+|||+|.||..++..|.+. +.+|. +++|++ .+.+.+. |+ . . ...++++.+++.+ +.|+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~-g~~V~-~~~r~~--~~~i~~~-Gl~~~~~~~g~~~~~~~~~~~~~~~~~~--~~Dl 74 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT-GHCVS-VVSRSD--YETVKAK-GIRIRSATLGDYTFRPAAVVRSAAELET--KPDC 74 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT-TCEEE-EECSTT--HHHHHHH-CEEEEETTTCCEEECCSCEESCGGGCSS--CCSE
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEE-EEeCCh--HHHHHhC-CcEEeecCCCcEEEeeeeeECCHHHcCC--CCCE
Confidence 37999999999999999988776 56765 667765 2444443 21 0 0 1234677777653 5899
Q ss_pred EEEcCCCcccHHHHHHHH---HcCCeE-EEeCCCC
Q 018020 77 VYLPLPTSMHVKWAISVA---QKKKHL-LMEKPMA 107 (362)
Q Consensus 77 V~i~~~~~~h~~~~~~al---~~gk~V-~~EKP~~ 107 (362)
|++++|+....+.+.... ..+..| .+.+.+.
T Consensus 75 VilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 75 TLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp EEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred EEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 999999988776555432 223343 3555553
No 290
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.83 E-value=0.0015 Score=60.67 Aligned_cols=64 Identities=19% Similarity=0.297 Sum_probs=50.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++.. ..+ ..+.+++++++. .|+|++++|...
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~-----~~g-----~~~~~l~ell~~--aDvV~l~~Plt~ 179 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGL-GWKVL-VCDPPRQAR-----EPD-----GEFVSLERLLAE--ADVISLHTPLNR 179 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECHHHHHH-----STT-----SCCCCHHHHHHH--CSEEEECCCCCS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC-CCEEE-EEcCChhhh-----ccC-----cccCCHHHHHHh--CCEEEEeccCcc
Confidence 46899999999999999999877 78876 678755321 223 236799999985 899999998754
No 291
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.83 E-value=0.0027 Score=57.65 Aligned_cols=75 Identities=15% Similarity=0.143 Sum_probs=48.7
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH-------cCCCCCCcccCCHHHHhcCCCCcEEE
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA-------NNFPPDAKVYGSYEALLDDKDIDAVY 78 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~e~l~~~~~D~V~ 78 (362)
|+++||+|||+|.+|...+..+...+-.+ +.++|+++++++..+.+ .+.+..+..++|+ +.+++ .|+|+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~--aDiVI 80 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGD-VVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEG--ADVVI 80 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTT--CSEEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCC--CCEEE
Confidence 45789999999999998888776553226 45899988776432221 1222223335677 55654 99999
Q ss_pred EcCCCc
Q 018020 79 LPLPTS 84 (362)
Q Consensus 79 i~~~~~ 84 (362)
++...+
T Consensus 81 iaag~p 86 (324)
T 3gvi_A 81 VTAGVP 86 (324)
T ss_dssp ECCSCC
T ss_pred EccCcC
Confidence 986543
No 292
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.83 E-value=0.002 Score=58.85 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=50.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++.. + +++ . ...++++++++. .|+|++++|...
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G~~V~-~~d~~~~~~--~-~~~-~----~~~~~l~ell~~--aDvV~l~~p~~~ 211 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF-GAKVI-TYDIFRNPE--L-EKK-G----YYVDSLDDLYKQ--ADVISLHVPDVP 211 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCHH--H-HHT-T----CBCSCHHHHHHH--CSEEEECSCCCG
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-CCEEE-EECCCcchh--H-Hhh-C----eecCCHHHHHhh--CCEEEEcCCCcH
Confidence 46899999999999999999877 78866 688876543 2 333 2 334589999985 999999999653
No 293
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.82 E-value=0.0017 Score=63.21 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=51.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|||||+|.||...+..++.. +++|+ ++|++... +. +.+.|+ .. .+++++++. .|+|++++|..
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~-G~~V~-~~d~~~~~-~~-a~~~g~----~~-~~l~e~~~~--aDvV~l~~P~~ 207 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF-GAYVV-AYDPYVSP-AR-AAQLGI----EL-LSLDDLLAR--ADFISVHLPKT 207 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEE-EECTTSCH-HH-HHHHTC----EE-CCHHHHHHH--CSEEEECCCCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEE-EECCCCCh-hH-HHhcCc----EE-cCHHHHHhc--CCEEEECCCCc
Confidence 46899999999999999999877 68866 67887643 22 445564 23 389999985 89999999986
No 294
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.81 E-value=0.0012 Score=61.09 Aligned_cols=63 Identities=11% Similarity=0.264 Sum_probs=49.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|+..+.. ..+ ..+.+++++++. .|+|++++|..
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~-G~~V~-~~d~~~~~~-----~~~-----~~~~sl~ell~~--aDiV~l~~Plt 181 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEAL-GIRTL-LCDPPRAAR-----GDE-----GDFRTLDELVQE--ADVLTFHTPLY 181 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECHHHHHT-----TCC-----SCBCCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-CCEEE-EECCChHHh-----ccC-----cccCCHHHHHhh--CCEEEEcCcCC
Confidence 45899999999999999999877 78877 577643321 112 357899999985 99999999854
No 295
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.80 E-value=0.0002 Score=65.15 Aligned_cols=66 Identities=14% Similarity=0.200 Sum_probs=49.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|++++..+.+ . ....+.+++++++. .|+|++++|..
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~-G~~V~-~~dr~~~~~~~~----~---~~~~~~~l~ell~~--aDvV~l~lPlt 202 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL-GMHVI-GVNTTGHPADHF----H---ETVAFTATADALAT--ANFIVNALPLT 202 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESSCCCCTTC----S---EEEEGGGCHHHHHH--CSEEEECCCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-CCEEE-EECCCcchhHhH----h---hccccCCHHHHHhh--CCEEEEcCCCc
Confidence 35899999999999999999877 78877 578875432211 1 01235789999985 99999999964
No 296
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.79 E-value=0.0017 Score=55.22 Aligned_cols=73 Identities=11% Similarity=0.201 Sum_probs=49.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
..+||+|||+|.||..++..+.+. +.+|+ ++|++++ .+ .+.|+|++++|+...
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~-g~~V~-~~~~~~~-----------------------~~--~~aD~vi~av~~~~~ 70 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA-GHEVT-YYGSKDQ-----------------------AT--TLGEIVIMAVPYPAL 70 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECTTCC-----------------------CS--SCCSEEEECSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEE-EEcCCHH-----------------------Hh--ccCCEEEEcCCcHHH
Confidence 367999999999999999998776 56765 6787643 22 358999999996655
Q ss_pred HHHHHH---HHHcCCeEE-EeCCCC
Q 018020 87 VKWAIS---VAQKKKHLL-MEKPMA 107 (362)
Q Consensus 87 ~~~~~~---al~~gk~V~-~EKP~~ 107 (362)
.+++.. .++ ++-|+ +-+++.
T Consensus 71 ~~v~~~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 71 AALAKQYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred HHHHHHHHHhcC-CCEEEEECCCCC
Confidence 555543 334 54443 334443
No 297
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.79 E-value=0.00043 Score=61.77 Aligned_cols=78 Identities=9% Similarity=0.040 Sum_probs=51.1
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCC-----cccCCHHHHhcCCCCcEEEEcCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDA-----KVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
|||+|||+|.||..++..|.+. +.+|+ ++|+++++.+.+... +. .+. ...++. +.++ +.|+|++++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~r~~~~~~~l~~~-~~-~~~~~~~~~~~~~~-~~~~--~~d~vi~~v~~ 73 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ-GHEVQ-GWLRVPQPYCSVNLV-ET-DGSIFNESLTANDP-DFLA--TSDLLLVTLKA 73 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCSEEEEEEE-CT-TSCEEEEEEEESCH-HHHH--TCSEEEECSCG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCCEE-EEEcCccceeeEEEE-cC-CCceeeeeeeecCc-cccC--CCCEEEEEecH
Confidence 4799999999999999998776 56755 678876654432211 10 010 023443 4555 49999999999
Q ss_pred cccHHHHHHH
Q 018020 84 SMHVKWAISV 93 (362)
Q Consensus 84 ~~h~~~~~~a 93 (362)
....+++...
T Consensus 74 ~~~~~v~~~l 83 (291)
T 1ks9_A 74 WQVSDAVKSL 83 (291)
T ss_dssp GGHHHHHHHH
T ss_pred HhHHHHHHHH
Confidence 8766655443
No 298
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.78 E-value=0.0013 Score=60.67 Aligned_cols=87 Identities=10% Similarity=0.163 Sum_probs=60.3
Q ss_pred eeEEEEEe-ccHHHHHHHHHHhcC--CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHH-HHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIG-AADIARKLSRAITLA--PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYE-ALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG-~G~~g~~~~~~~~~~--~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-e~l~~~~~D~V~i~~~~ 83 (362)
++||+||| +|..|...++.|.++ |..+++.+.+++.. -+.+. +.. .+ ..+.+.+ +.+ .++|+|+.|+|.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~~~~--~~~-~~-~~~~~~~~~~~--~~~Dvvf~a~~~ 74 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLK--FKD-QD-ITIEETTETAF--EGVDIALFSAGS 74 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TCEEE--ETT-EE-EEEEECCTTTT--TTCSEEEECSCH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CCcce--ecC-CC-ceEeeCCHHHh--cCCCEEEECCCh
Confidence 58999999 588999999998886 88898888765321 11110 110 00 1111111 123 369999999999
Q ss_pred cccHHHHHHHHHcCCeEE
Q 018020 84 SMHVKWAISVAQKKKHLL 101 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~ 101 (362)
....+++..++++|..|+
T Consensus 75 ~~s~~~a~~~~~~G~~vI 92 (366)
T 3pwk_A 75 STSAKYAPYAVKAGVVVV 92 (366)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HhHHHHHHHHHHCCCEEE
Confidence 999999999999998665
No 299
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.78 E-value=0.0013 Score=59.19 Aligned_cols=63 Identities=17% Similarity=0.300 Sum_probs=50.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++ +. +. ..+.+++++++. .|+|++++|...
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~-G~~V~-~~dr~~~--~~-----~~----~~~~~l~ell~~--aDvV~l~~P~~~ 186 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAAL-GAQVR-GFSRTPK--EG-----PW----RFTNSLEEALRE--ARAAVCALPLNK 186 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHT-TCEEE-EECSSCC--CS-----SS----CCBSCSHHHHTT--CSEEEECCCCST
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-CCEEE-EECCCcc--cc-----Cc----ccCCCHHHHHhh--CCEEEEeCcCch
Confidence 46899999999999999999877 68866 6888764 11 21 346789999986 999999999764
No 300
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.77 E-value=0.003 Score=57.34 Aligned_cols=75 Identities=16% Similarity=0.135 Sum_probs=50.7
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-C-C--CCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-F-P--PDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~-~--~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
..+||+|||+|.+|...+..+...+-+.-+.++|+++++++..+.++. . + +.+.++++..+.++ +.|+|+++..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~--~aDiVvi~ag 85 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAK--DADLVVITAG 85 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGT--TCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhc--CCCEEEECCC
Confidence 468999999999999998888766444345589999988875544431 1 1 12344444344455 4999999865
Q ss_pred C
Q 018020 83 T 83 (362)
Q Consensus 83 ~ 83 (362)
.
T Consensus 86 ~ 86 (326)
T 3vku_A 86 A 86 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 301
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=96.77 E-value=0.0057 Score=55.20 Aligned_cols=98 Identities=19% Similarity=0.221 Sum_probs=68.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcC--CCcEEEEEEcCC-HHHHHHHHHHcCC-----C--------------CCCccc--C
Q 018020 8 AIRFGIIGAADIARKLSRAITLA--PNAVLSAVASRS-LEKATNFAKANNF-----P--------------PDAKVY--G 63 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~--~~~~vv~v~d~~-~~~~~~~~~~~~~-----~--------------~~~~~~--~ 63 (362)
++||||=|+|.||+...+++... +++++|+|-|+. .+....+- +|+. + +.+.++ .
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~-kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 80 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLL-RYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAVR 80 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCCEECSSEEESSSSEEEEECCS
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHh-cccCCCCCCCCeEEEecCEEEECCEEEEEEeec
Confidence 58999999999999888877655 689999999983 23333221 2211 0 011121 2
Q ss_pred CHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 64 SYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 64 ~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
+++++ ..+.++|+|+-+|......+.+...+++| |.|++.-|.
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps 125 (335)
T 3doc_A 81 NPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPA 125 (335)
T ss_dssp STTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred ccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCC
Confidence 33333 23457999999999999999999999999 778887773
No 302
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=96.75 E-value=0.0018 Score=59.24 Aligned_cols=86 Identities=15% Similarity=0.171 Sum_probs=59.9
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcC--CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHH-HHhcCCCCcEEEEcCCCc
Q 018020 9 IRFGIIG-AADIARKLSRAITLA--PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYE-ALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~--~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-e~l~~~~~D~V~i~~~~~ 84 (362)
+||+||| +|..|..+++.|.++ |.++++.+.+++.. .+.+. ++- .+ ..+.+.+ +.+ .++|+|+.|+|..
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a-G~~~~--~~~-~~-~~~~~~~~~~~--~~~Dvvf~a~~~~ 74 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQ-GRKLA--FRG-QE-IEVEDAETADP--SGLDIALFSAGSA 74 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS-SCEEE--ETT-EE-EEEEETTTSCC--TTCSEEEECSCHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccC-CCcee--ecC-Cc-eEEEeCCHHHh--ccCCEEEECCChH
Confidence 7999999 588899999999887 88899988765321 11110 110 00 1122222 122 3699999999999
Q ss_pred ccHHHHHHHHHcCCeEE
Q 018020 85 MHVKWAISVAQKKKHLL 101 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~ 101 (362)
.+.+++..++++|..|+
T Consensus 75 ~s~~~a~~~~~~G~~vI 91 (344)
T 3tz6_A 75 MSKVQAPRFAAAGVTVI 91 (344)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhCCCEEE
Confidence 99999999999998655
No 303
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.74 E-value=0.0052 Score=58.97 Aligned_cols=67 Identities=21% Similarity=0.185 Sum_probs=52.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|+|||+|.+|...+..++.. +++|+ ++|+++++++. +.+.|. . +.++++++. +.|+|+.++++.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-Ga~Vi-v~d~~~~~~~~-A~~~Ga----~-~~~l~e~l~--~aDvVi~atgt~ 340 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-GARVS-VTEIDPINALQ-AMMEGF----D-VVTVEEAIG--DADIVVTATGNK 340 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHH-HHHTTC----E-ECCHHHHGG--GCSEEEECSSSS
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHH-HHHcCC----E-EecHHHHHh--CCCEEEECCCCH
Confidence 35899999999999999999877 57755 78999887655 345664 2 457888886 499999998654
No 304
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.74 E-value=0.0033 Score=56.83 Aligned_cols=78 Identities=18% Similarity=0.240 Sum_probs=52.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC-----C-----CCcccCCHHHHhcCCCCcEE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP-----P-----DAKVYGSYEALLDDKDIDAV 77 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~e~l~~~~~D~V 77 (362)
++||+|||+|.||..++..|.+. +.+|. +++|++ .+.+. +.|+. . ...++++.+++ . +.|+|
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~-g~~V~-~~~r~~--~~~i~-~~g~~~~~~~g~~~~~~~~~~~~~~~~-~--~~D~v 73 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRS-GEDVH-FLLRRD--YEAIA-GNGLKVFSINGDFTLPHVKGYRAPEEI-G--PMDLV 73 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHT-SCCEE-EECSTT--HHHHH-HTCEEEEETTCCEEESCCCEESCHHHH-C--CCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCeEE-EEEcCc--HHHHH-hCCCEEEcCCCeEEEeeceeecCHHHc-C--CCCEE
Confidence 37899999999999999988776 45655 667765 34444 33321 0 12345677663 3 59999
Q ss_pred EEcCCCcccHHHHHHH
Q 018020 78 YLPLPTSMHVKWAISV 93 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~a 93 (362)
++++|+....+.+...
T Consensus 74 ilavk~~~~~~~l~~l 89 (312)
T 3hn2_A 74 LVGLKTFANSRYEELI 89 (312)
T ss_dssp EECCCGGGGGGHHHHH
T ss_pred EEecCCCCcHHHHHHH
Confidence 9999998877666554
No 305
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.74 E-value=0.0025 Score=57.98 Aligned_cols=75 Identities=16% Similarity=-0.017 Sum_probs=49.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc--CCC---CCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN--NFP---PDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~--~~~---~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
..+||+|||+|.+|...+..+...+-+.-+.++|+++++++..+.++ +.| ..+.++++..+.++ +.|+|+++.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~--~aDvVvi~a 81 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCK--DADIVCICA 81 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGT--TCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhC--CCCEEEEec
Confidence 46899999999999999888876644433458999998877643332 111 12334433334455 499999986
Q ss_pred CC
Q 018020 82 PT 83 (362)
Q Consensus 82 ~~ 83 (362)
..
T Consensus 82 g~ 83 (326)
T 3pqe_A 82 GA 83 (326)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 306
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.70 E-value=0.00021 Score=64.76 Aligned_cols=66 Identities=20% Similarity=0.211 Sum_probs=48.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|++++..+ ++. ......+++++++. .|+|++++|..
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G~~V~-~~dr~~~~~~------~~~-~~~~~~~l~ell~~--aDiV~l~~Plt 204 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-GFPLR-CWSRSRKSWP------GVE-SYVGREELRAFLNQ--TRVLINLLPNT 204 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-TCCEE-EEESSCCCCT------TCE-EEESHHHHHHHHHT--CSEEEECCCCC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEE-EEcCCchhhh------hhh-hhcccCCHHHHHhh--CCEEEEecCCc
Confidence 46899999999999999999877 78877 5777654221 110 00112689999985 89999999954
No 307
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.68 E-value=0.0065 Score=55.56 Aligned_cols=79 Identities=11% Similarity=0.081 Sum_probs=52.9
Q ss_pred CCccCCceeEEEEEec-cHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHc---CCC-CCCcccCCHHHHhcCCCC
Q 018020 1 MATESQAAIRFGIIGA-ADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKAN---NFP-PDAKVYGSYEALLDDKDI 74 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~-G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~---~~~-~~~~~~~~~~e~l~~~~~ 74 (362)
|+-+-|..+||+|||+ |.+|...+..+...+-. + +.++|+++++++..+.++ ..+ ..+...+++.+.+++ .
T Consensus 1 ~~~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~e-vvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d--A 77 (343)
T 3fi9_A 1 MSLSYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPN-LCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD--A 77 (343)
T ss_dssp -CCCCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSC-EEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT--E
T ss_pred CCccccCCCEEEEECCCChHHHHHHHHHHhcCCCCE-EEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC--C
Confidence 4445567889999997 99999887766555322 4 458999988766533221 122 123445788888885 9
Q ss_pred cEEEEcCC
Q 018020 75 DAVYLPLP 82 (362)
Q Consensus 75 D~V~i~~~ 82 (362)
|+|+++..
T Consensus 78 DvVvitaG 85 (343)
T 3fi9_A 78 KYIVSSGG 85 (343)
T ss_dssp EEEEECCC
T ss_pred CEEEEccC
Confidence 99999753
No 308
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.68 E-value=0.011 Score=54.15 Aligned_cols=89 Identities=11% Similarity=0.066 Sum_probs=61.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHH-HH---hcCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYE-AL---LDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~-e~---l~~~~~D~V~i~~ 81 (362)
-+|.|+|+|.+|...++.++...+.++++ .++++++.+ +++++|.. .+. +++. ++ .....+|+|+-++
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~-~~~~~~~~~-~~~~lGa~---~~i~~~~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIA-VDLDDDRLA-LAREVGAD---AAVKSGAGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEE-EESCHHHHH-HHHHTTCS---EEEECSTTHHHHHHHHHGGGCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEE-EcCCHHHHH-HHHHcCCC---EEEcCCCcHHHHHHHHhCCCCCeEEEECC
Confidence 47899999999998888887775677664 567777665 55778753 122 1222 22 2223799999999
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
......+.+.++++.| +-|++
T Consensus 248 G~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 248 GAQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp CCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHhcCCEEEEE
Confidence 9987788888888776 44444
No 309
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=96.67 E-value=0.0093 Score=54.10 Aligned_cols=126 Identities=13% Similarity=0.146 Sum_probs=81.3
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcC---------------------C-CcEEEEEEcCCHHHHHH-HHH----HcCC---
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLA---------------------P-NAVLSAVASRSLEKATN-FAK----ANNF--- 55 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~---------------------~-~~~vv~v~d~~~~~~~~-~~~----~~~~--- 55 (362)
..++||||||.|+.|...+..+... + ++++++.+|.++.+.-+ +.+ +.++
T Consensus 13 ~~~~rVaIVGvGN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~~~ 92 (367)
T 1gr0_A 13 STEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIK 92 (367)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCCCC
T ss_pred ccCCCEEEECcChHHHHHHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCchhh
Confidence 3579999999999999877743211 1 57899999997754321 111 1121
Q ss_pred ----C------------CC------------CcccCCHHHHhcCCCCcEEEEcCCCccc---HHHHHHHHHcCCeEEEeC
Q 018020 56 ----P------------PD------------AKVYGSYEALLDDKDIDAVYLPLPTSMH---VKWAISVAQKKKHLLMEK 104 (362)
Q Consensus 56 ----~------------~~------------~~~~~~~~e~l~~~~~D~V~i~~~~~~h---~~~~~~al~~gk~V~~EK 104 (362)
+ .+ .....|+.+.+++.++|+|+.-.|.... .-++.+|+++|.+.+---
T Consensus 93 ~~~v~~~~v~v~~g~~ldgia~~~~~~i~~s~~~~~Di~~~~~~~~~dVvV~~lp~gs~~aS~~YA~Aal~ag~~fvN~~ 172 (367)
T 1gr0_A 93 IADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNAL 172 (367)
T ss_dssp CSCCCCCCCBCEECCCTTSCCHHHHTTSCBCSSCCCCHHHHHHHTTCSEEEECCCTTCHHHHHHHHHHHHHHTCEEEECS
T ss_pred hhcccccCceEccCCCCCchhhhhhhccccccchhhHHHHHHHHhCCcEEEEeeeCCCcCHHHHHHHHHHHcCCceEecC
Confidence 1 00 0123367778888899977777776532 446778999999988777
Q ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEeeecc
Q 018020 105 PMALNVAEFDVILNACEENGVQLMDGTMWV 134 (362)
Q Consensus 105 P~~~~~~~~~~l~~~a~~~~~~~~v~~~~r 134 (362)
|-..- .-.++.++++++|+++. |--..
T Consensus 173 P~~~~--~~P~~~el~~~~g~pi~-GdD~K 199 (367)
T 1gr0_A 173 PVFIA--SDPVWAKKFTDARVPIV-GDDIK 199 (367)
T ss_dssp SCCST--TSHHHHHHHHHHTCEEE-ESSBC
T ss_pred Ccccc--CCHHHHHHHHHcCCCEe-ccccc
Confidence 74332 22337789999999865 44433
No 310
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.66 E-value=0.0017 Score=59.37 Aligned_cols=103 Identities=15% Similarity=0.173 Sum_probs=66.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++.. + ++. ..+.+++++++. .|+|++++|.....
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~-G~~V~-~~d~~~~~~--~-~~~------~~~~~l~ell~~--aDvV~~~~P~~~~t 211 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF-GAKVI-AYDPYPMKG--D-HPD------FDYVSLEDLFKQ--SDVIDLHVPGIEQN 211 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCSS--C-CTT------CEECCHHHHHHH--CSEEEECCCCCGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEE-EECCCcchh--h-Hhc------cccCCHHHHHhc--CCEEEEcCCCchhH
Confidence 46899999999999999999877 78866 688875432 1 111 125689999985 99999999975421
Q ss_pred -----HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 018020 88 -----KWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV 125 (362)
Q Consensus 88 -----~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~ 125 (362)
.-....++.| .+++.-- ...+-+.+.|.++.++.++
T Consensus 212 ~~li~~~~l~~mk~g-a~lIn~s-rg~~vd~~aL~~aL~~g~i 252 (333)
T 1dxy_A 212 THIINEAAFNLMKPG-AIVINTA-RPNLIDTQAMLSNLKSGKL 252 (333)
T ss_dssp TTSBCHHHHHHSCTT-EEEEECS-CTTSBCHHHHHHHHHTTSE
T ss_pred HHHhCHHHHhhCCCC-cEEEECC-CCcccCHHHHHHHHHhCCc
Confidence 1223444444 4555432 2233444566666665443
No 311
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.65 E-value=0.0013 Score=59.49 Aligned_cols=62 Identities=19% Similarity=0.342 Sum_probs=49.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++... + .+.+++++++. .|+|++++|...
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~-G~~V~-~~d~~~~~~~-------~-----~~~~l~ell~~--aDvV~l~~p~~~ 205 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAF-GMRVV-YHARTPKPLP-------Y-----PFLSLEELLKE--ADVVSLHTPLTP 205 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCSSS-------S-----CBCCHHHHHHH--CSEEEECCCCCT
T ss_pred CCEEEEEEECHHHHHHHHHHHHC-CCEEE-EECCCCcccc-------c-----ccCCHHHHHhh--CCEEEEeCCCCh
Confidence 46899999999999999999877 68865 6888764322 1 25689999985 899999999863
No 312
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.62 E-value=0.0061 Score=57.92 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=51.6
Q ss_pred eeEEEEEeccHH-HHHHHHHHhcC-CC--cEEEEEEcCCH--HHHHH---HHH----HcCCCCCCcccCCHHHHhcCCCC
Q 018020 8 AIRFGIIGAADI-ARKLSRAITLA-PN--AVLSAVASRSL--EKATN---FAK----ANNFPPDAKVYGSYEALLDDKDI 74 (362)
Q Consensus 8 ~~~v~iiG~G~~-g~~~~~~~~~~-~~--~~vv~v~d~~~--~~~~~---~~~----~~~~~~~~~~~~~~~e~l~~~~~ 74 (362)
++||+|||+|+. +..++..+... ++ ..=+.++|+++ ++++. ++. ..+.+..+..++|+++.+++ .
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g--A 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG--A 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT--C
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC--C
Confidence 689999999997 65555544432 33 23355999998 77654 222 23444344456799888885 9
Q ss_pred cEEEEcCCCcc
Q 018020 75 DAVYLPLPTSM 85 (362)
Q Consensus 75 D~V~i~~~~~~ 85 (362)
|+|+++.+...
T Consensus 85 D~VVitagv~~ 95 (450)
T 1s6y_A 85 DFVTTQFRVGG 95 (450)
T ss_dssp SEEEECCCTTH
T ss_pred CEEEEcCCCCC
Confidence 99999999754
No 313
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.62 E-value=0.0017 Score=59.52 Aligned_cols=64 Identities=19% Similarity=0.337 Sum_probs=49.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
-.+|||||+|.||+..++.++.. +++|+ ++|++++.. . +.+ ..+.+++++++. .|+|++++|..
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~~--~--~~~-----~~~~~l~ell~~--aDvV~l~~Plt 211 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM-GAKVI-AYDVAYNPE--F--EPF-----LTYTDFDTVLKE--ADIVSLHTPLF 211 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCGG--G--TTT-----CEECCHHHHHHH--CSEEEECCCCC
T ss_pred CCeEEEEecCHHHHHHHHHHhhC-CCEEE-EECCChhhh--h--hcc-----ccccCHHHHHhc--CCEEEEcCCCC
Confidence 45899999999999999999877 78866 688876431 1 111 235599999985 99999999953
No 314
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.56 E-value=0.0055 Score=58.54 Aligned_cols=91 Identities=15% Similarity=0.195 Sum_probs=63.9
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc--CCCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD--DKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~--~~~~D~V~i~~ 81 (362)
..|||.|+|+|..|...++.|... +.+++ +.|.++++++.+.+++++. .++ ++.+-+-+ -.+.|+++.+|
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~-~~~v~-vId~d~~~~~~~~~~~~~~---~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE-NNDIT-IVDKDGDRLRELQDKYDLR---VVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST-TEEEE-EEESCHHHHHHHHHHSSCE---EEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC-CCCEE-EEECCHHHHHHHHHhcCcE---EEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 368999999999999999998765 67766 7899999999999998764 233 23333322 25799999999
Q ss_pred CCcccHHHHHHHHHc--C-CeEEE
Q 018020 82 PTSMHVKWAISVAQK--K-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~--g-k~V~~ 102 (362)
+.+.---++....+. + ++++.
T Consensus 77 ~~De~Nl~~~~~Ak~~~~~~~~ia 100 (461)
T 4g65_A 77 NTDETNMAACQVAFTLFNTPNRIA 100 (461)
T ss_dssp SCHHHHHHHHHHHHHHHCCSSEEE
T ss_pred CChHHHHHHHHHHHHhcCCcccee
Confidence 887654444333322 3 55554
No 315
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.55 E-value=0.0085 Score=56.20 Aligned_cols=65 Identities=11% Similarity=0.047 Sum_probs=50.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
-.+|+|||+|.+|+..+..++.. +++|+ ++|+++.++... ...|. .+.++++++.. .|+|+.++.
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~-Ga~Vi-v~D~~p~~a~~A-~~~G~-----~~~sL~eal~~--ADVVilt~g 275 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGF-GARVV-VTEVDPINALQA-AMEGY-----QVLLVEDVVEE--AHIFVTTTG 275 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHH-HHTTC-----EECCHHHHTTT--CSEEEECSS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEE-EECCChhhhHHH-HHhCC-----eecCHHHHHhh--CCEEEECCC
Confidence 46899999999999999999988 68865 799998765543 34453 25699999985 999997553
No 316
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.54 E-value=0.0031 Score=58.29 Aligned_cols=92 Identities=10% Similarity=0.039 Sum_probs=61.9
Q ss_pred eEEEEEe-ccHHHHHHHH-HHhcC--CCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHHhcCCCCcEEEEcCC
Q 018020 9 IRFGIIG-AADIARKLSR-AITLA--PNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~-~~~~~--~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~l~~~~~D~V~i~~~ 82 (362)
+||||+| +|.+|...++ .+.++ |.+++..+..++. .+.+..-.|. ...+. .+.++ ++ ++|+|+.|+|
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~--G~~v~~~~g~--~i~~~~~~~~~~-~~--~~DvVf~a~g 74 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL--GQAAPSFGGT--TGTLQDAFDLEA-LK--ALDIIVTCQG 74 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST--TSBCCGGGTC--CCBCEETTCHHH-HH--TCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCC--CCCccccCCC--ceEEEecCChHH-hc--CCCEEEECCC
Confidence 6899999 8999999999 66655 3467766665431 1111100121 11222 23444 34 6999999999
Q ss_pred CcccHHHHHHHHHcCC-eEEEeCCCC
Q 018020 83 TSMHVKWAISVAQKKK-HLLMEKPMA 107 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk-~V~~EKP~~ 107 (362)
.....+++..++++|. -++++-|-+
T Consensus 75 ~~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 75 GDYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred chhHHHHHHHHHHCCCCEEEEcCChh
Confidence 9999999999999995 577776543
No 317
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=96.54 E-value=0.0012 Score=59.90 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=66.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC-HHHHHHHHHHcCC-----C--------------CCCcccC--C
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS-LEKATNFAKANNF-----P--------------PDAKVYG--S 64 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~-~~~~~~~~~~~~~-----~--------------~~~~~~~--~ 64 (362)
.++||||.|+|.+|+..++.+.+. +++|++|-|.. .+....+- +|.. + +.+.++. +
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl~d~~~~a~ll-kydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~~d 97 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDLTDPKTLAHLL-KYDSTFGVYNKKVESRDGAIVVDGREIKIIAERD 97 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCHHHhhhhh-ccccCCCCCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 469999999999999999988766 89999999873 33333222 1111 0 0112221 3
Q ss_pred HHHH-hcCCCCcEEEEcCCCccc----HHHHHHHHH-cC-CeEEEeCCC
Q 018020 65 YEAL-LDDKDIDAVYLPLPTSMH----VKWAISVAQ-KK-KHLLMEKPM 106 (362)
Q Consensus 65 ~~e~-l~~~~~D~V~i~~~~~~h----~~~~~~al~-~g-k~V~~EKP~ 106 (362)
.+++ ..+.++|+|+-+|....- .+.+...++ +| |.|++.-|.
T Consensus 98 p~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps 146 (356)
T 3hja_A 98 PKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPA 146 (356)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCC
T ss_pred hhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCC
Confidence 3332 122379999999998888 888889999 88 778988774
No 318
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.53 E-value=0.0068 Score=54.96 Aligned_cols=75 Identities=13% Similarity=0.105 Sum_probs=48.8
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc-------CCCCCCcccCCHHHHhcCCCCcEEE
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN-------NFPPDAKVYGSYEALLDDKDIDAVY 78 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~e~l~~~~~D~V~ 78 (362)
|+++||+|||+|.+|...+..+...+-.+ +.++|+++++++..+.+. +.+..+...+++ +.+++ .|+|+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~-v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~a~~~--aDvVI 78 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGD-VVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-KDLEN--SDVVI 78 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT--CSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-HHHCC--CCEEE
Confidence 34689999999999998888876553236 448999987765443332 111122224565 45554 89999
Q ss_pred EcCCCc
Q 018020 79 LPLPTS 84 (362)
Q Consensus 79 i~~~~~ 84 (362)
++.+.+
T Consensus 79 i~ag~p 84 (321)
T 3p7m_A 79 VTAGVP 84 (321)
T ss_dssp ECCSCC
T ss_pred EcCCcC
Confidence 986543
No 319
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.49 E-value=0.022 Score=52.22 Aligned_cols=107 Identities=14% Similarity=0.078 Sum_probs=71.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCC-Cccc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLP-TSMH 86 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~-~~~h 86 (362)
-.+|+|+|+|.+|...+..++.. +++|+ ++|+++++ .+++++++. . +.+.++++.. ++|+++-|.- +...
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~-GakVv-vsD~~~~~-~~~a~~~ga----~-~v~~~ell~~-~~DIliP~A~~~~I~ 245 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEA-GAQLL-VADTDTER-VAHAVALGH----T-AVALEDVLST-PCDVFAPCAMGGVIT 245 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHH-HHHHHHTTC----E-ECCGGGGGGC-CCSEEEECSCSCCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeCCccH-HHHHHhcCC----E-EeChHHhhcC-ccceecHhHHHhhcC
Confidence 36899999999999999988877 78998 99999876 667777763 2 3477888874 6899886432 2233
Q ss_pred HHHHHHHHHcCCeEEEeCCCCC-CHHHHHHHHHHHHHcCCEEEE
Q 018020 87 VKWAISVAQKKKHLLMEKPMAL-NVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 87 ~~~~~~al~~gk~V~~EKP~~~-~~~~~~~l~~~a~~~~~~~~v 129 (362)
.+.+ ..+ +..+++|--=.. +.+++. +..++.|+.+..
T Consensus 246 ~~~~-~~l--k~~iVie~AN~p~t~~eA~---~~L~~~gIlv~P 283 (355)
T 1c1d_A 246 TEVA-RTL--DCSVVAGAANNVIADEAAS---DILHARGILYAP 283 (355)
T ss_dssp HHHH-HHC--CCSEECCSCTTCBCSHHHH---HHHHHTTCEECC
T ss_pred HHHH-hhC--CCCEEEECCCCCCCCHHHH---HHHHhCCEEEEC
Confidence 3333 233 457888852111 223443 556777776653
No 320
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.48 E-value=0.0098 Score=60.07 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=51.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH----------cCC-C--------CCCcccCCHHHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA----------NNF-P--------PDAKVYGSYEAL 68 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~----------~~~-~--------~~~~~~~~~~e~ 68 (362)
..||+|||+|.||...+..+.+. +++|+ ++|++++++++..+. .|. + ..+...+|+ +.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a-G~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~ 388 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS-NYPVI-LKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ES 388 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-TCCEE-EECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GG
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC-CCEEE-EEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HH
Confidence 45899999999999999988776 67755 789999877654221 121 0 112345677 44
Q ss_pred hcCCCCcEEEEcCCCccc
Q 018020 69 LDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 69 l~~~~~D~V~i~~~~~~h 86 (362)
++ ++|+|+.++|....
T Consensus 389 ~~--~aDlVIeaVpe~~~ 404 (725)
T 2wtb_A 389 FR--DVDMVIEAVIENIS 404 (725)
T ss_dssp GT--TCSEEEECCCSCHH
T ss_pred HC--CCCEEEEcCcCCHH
Confidence 55 49999999998863
No 321
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.44 E-value=0.028 Score=51.30 Aligned_cols=91 Identities=11% Similarity=0.001 Sum_probs=60.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCH-H---HHhcCCCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSY-E---ALLDDKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~-~---e~l~~~~~D~V~i~~~ 82 (362)
-+|.|+|+|.+|...+..++...+.+|++ .|+++++.+ +++++|... +.-+ .++ + ++.....+|.++.++.
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~-~~~~~~r~~-~~~~~Ga~~-~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIA-VDINQDKLN-LAKKIGADV-TINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEE-EESCHHHHH-HHHHTTCSE-EEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEE-EECcHHHhh-hhhhcCCeE-EEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 36899999999988888888777888875 457777654 566776430 0111 122 2 2333457899999988
Q ss_pred CcccHHHHHHHHHcC-CeEEE
Q 018020 83 TSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 83 ~~~h~~~~~~al~~g-k~V~~ 102 (362)
.......+..+++.| +-+++
T Consensus 242 ~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 242 ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CHHHHHHHHHTEEEEEEEEEC
T ss_pred CcchhheeheeecCCceEEEE
Confidence 887777777777665 44444
No 322
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.41 E-value=0.0051 Score=57.03 Aligned_cols=73 Identities=5% Similarity=0.012 Sum_probs=52.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCC--cccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDA--KVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|+|+|+|.+|...+..++.. +++|+ ++|+++++++.+.+.++..-.+ .-..++++++. ++|+|+.+++..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~-~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~--~~DvVi~~~g~~ 240 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQVT-ILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ--HADLLIGAVLVP 240 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH--HCSEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEE-EEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh--CCCEEEECCCCC
Confidence 47899999999999999999877 67755 7899999888777667632000 01245566665 499999988754
No 323
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.37 E-value=0.0022 Score=60.13 Aligned_cols=64 Identities=22% Similarity=0.264 Sum_probs=48.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
.++||||+|.||+..+..++.. +++|+ ++|+++... . .+...+.+++++++. .|+|++++|...
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~-~yd~~~~~~------~---~~~~~~~sl~ell~~--aDvV~lhvPlt~ 220 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVR-YYDTSDKLQ------Y---GNVKPAASLDELLKT--SDVVSLHVPSSK 220 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECTTCCCC------B---TTBEECSSHHHHHHH--CSEEEECCCC--
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEE-EECCcchhc------c---cCcEecCCHHHHHhh--CCEEEEeCCCCH
Confidence 5899999999999999999887 78876 688763211 1 112456899999986 999999999743
No 324
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.36 E-value=0.011 Score=55.43 Aligned_cols=64 Identities=14% Similarity=0.068 Sum_probs=49.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
-+|+|||+|.+|+..+..++.. +++|+ ++|+++.++... ...|. -+.++++++.. .|+|+.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf-Ga~Vi-v~d~dp~~a~~A-~~~G~-----~vv~LeElL~~--ADIVv~atg 311 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA-GARVK-VTEVDPICALQA-AMDGF-----EVVTLDDAAST--ADIVVTTTG 311 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSHHHHHHH-HHTTC-----EECCHHHHGGG--CSEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeCCcchhhHH-HhcCc-----eeccHHHHHhh--CCEEEECCC
Confidence 5799999999999999999887 78866 789988765433 34453 24589999985 899988654
No 325
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.35 E-value=0.0023 Score=59.97 Aligned_cols=65 Identities=20% Similarity=0.192 Sum_probs=50.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
-.++||||+|.||...+..++.. +++|+ ++|+++.. ..+ ++..+.+++++++. .|+|++++|...
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~-G~~V~-~~d~~~~~------~~~---~~~~~~~l~ell~~--aDvV~l~~P~t~ 209 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESL-GMYVY-FYDIENKL------PLG---NATQVQHLSDLLNM--SDVVSLHVPENP 209 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCC------CCT---TCEECSCHHHHHHH--CSEEEECCCSST
T ss_pred CCEEEEEeECHHHHHHHHHHHHC-CCEEE-EEcCCchh------ccC---CceecCCHHHHHhc--CCEEEEccCCCh
Confidence 35899999999999999999877 78876 68886432 112 12456799999986 899999999753
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.34 E-value=0.0077 Score=51.50 Aligned_cols=89 Identities=9% Similarity=0.067 Sum_probs=59.3
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHH-HHhcCCCCcEEEEcCCCcc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYE-ALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-e~l~~~~~D~V~i~~~~~~ 85 (362)
+..+|.|||+|.+|..-+..|.+. +++|+.+.....+..+.++++.++. -....++ +.|+ ++|+|+.+|....
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~~~~~l~~l~~~~~i~---~i~~~~~~~dL~--~adLVIaAT~d~~ 103 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPTVSAEINEWEAKGQLR---VKRKKVGEEDLL--NVFFIVVATNDQA 103 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSSCCHHHHHHHHTTSCE---EECSCCCGGGSS--SCSEEEECCCCTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHcCCcE---EEECCCCHhHhC--CCCEEEECCCCHH
Confidence 356899999999999999988877 5676644333324466677665542 1122232 2344 5999999999887
Q ss_pred cHHHHHHHHHcCCeEE
Q 018020 86 HVKWAISVAQKKKHLL 101 (362)
Q Consensus 86 h~~~~~~al~~gk~V~ 101 (362)
-...+..+.++|+.|-
T Consensus 104 ~N~~I~~~ak~gi~VN 119 (223)
T 3dfz_A 104 VNKFVKQHIKNDQLVN 119 (223)
T ss_dssp HHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHhCCCEEE
Confidence 7666666666666554
No 327
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.34 E-value=0.014 Score=53.49 Aligned_cols=86 Identities=15% Similarity=0.193 Sum_probs=61.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccHH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVK 88 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~~ 88 (362)
-+|.|+|+|.+|...+..++.. ++++++ .++++++.+ +++++|.. .++.+.+++ .. .+|+|+.++......+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~-~~~~~~~~~-~~~~lGa~---~v~~~~~~~-~~-~~D~vid~~g~~~~~~ 249 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM-GAEVSV-FARNEHKKQ-DALSMGVK---HFYTDPKQC-KE-ELDFIISTIPTHYDLK 249 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEE-ECSSSTTHH-HHHHTTCS---EEESSGGGC-CS-CEEEEEECCCSCCCHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCeEEE-EeCCHHHHH-HHHhcCCC---eecCCHHHH-hc-CCCEEEECCCcHHHHH
Confidence 4789999999999888888877 678775 456666555 55678853 333444443 33 7999999999887788
Q ss_pred HHHHHHHcC-CeEEE
Q 018020 89 WAISVAQKK-KHLLM 102 (362)
Q Consensus 89 ~~~~al~~g-k~V~~ 102 (362)
.+..+++.| +-|++
T Consensus 250 ~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 250 DYLKLLTYNGDLALV 264 (348)
T ss_dssp HHHTTEEEEEEEEEC
T ss_pred HHHHHHhcCCEEEEE
Confidence 888888776 44444
No 328
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.33 E-value=0.029 Score=51.73 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=64.7
Q ss_pred eeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhcC---CCCcEEEEc
Q 018020 8 AIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLDD---KDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~~---~~~D~V~i~ 80 (362)
--+|.|+| +|.+|...+..++...+.+|++ .++++++.+. ++++|.. .++ +++.+-+.. ..+|+|+.+
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~-~~~~~~~~~~-~~~lGad---~vi~~~~~~~~~v~~~~~~g~Dvvid~ 246 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIA-TASRPETQEW-VKSLGAH---HVIDHSKPLAAEVAALGLGAPAFVFST 246 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEE-ECSSHHHHHH-HHHTTCS---EEECTTSCHHHHHHTTCSCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHH-HHHcCCC---EEEeCCCCHHHHHHHhcCCCceEEEEC
Confidence 45799999 8999998888887655788775 4567766654 5667753 222 233333322 469999999
Q ss_pred CCCcccHHHHHHHHHcC-CeEEEeCCCCC
Q 018020 81 LPTSMHVKWAISVAQKK-KHLLMEKPMAL 108 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~g-k~V~~EKP~~~ 108 (362)
+......+.+.++++.| +-|++..|...
T Consensus 247 ~g~~~~~~~~~~~l~~~G~iv~~g~~~~~ 275 (363)
T 4dvj_A 247 THTDKHAAEIADLIAPQGRFCLIDDPSAF 275 (363)
T ss_dssp SCHHHHHHHHHHHSCTTCEEEECSCCSSC
T ss_pred CCchhhHHHHHHHhcCCCEEEEECCCCcc
Confidence 98877777777888766 55566555433
No 329
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.33 E-value=0.013 Score=53.35 Aligned_cols=89 Identities=15% Similarity=0.041 Sum_probs=61.7
Q ss_pred ceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCH--HHHHHHHHHcCCCCCCccc--CCHHHHhcCCCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSL--EKATNFAKANNFPPDAKVY--GSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~--~~~~~~~~~~~~~~~~~~~--~~~~e~l~~~~~D~V~i~~ 81 (362)
.+.||.+||.|.+|.. .+..+.+. +++|. ++|... ...+.+. +.|++ ++ .+.+++.+ .++|+|+++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~-G~~V~-~~D~~~~~~~~~~L~-~~gi~----v~~g~~~~~l~~-~~~d~vV~Sp 74 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEA-GFEVS-GCDAKMYPPMSTQLE-ALGID----VYEGFDAAQLDE-FKADVYVIGN 74 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHT-TCEEE-EEESSCCTTHHHHHH-HTTCE----EEESCCGGGGGS-CCCSEEEECT
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhC-CCEEE-EEcCCCCcHHHHHHH-hCCCE----EECCCCHHHcCC-CCCCEEEECC
Confidence 3568999999999985 77777777 78866 677643 2334443 34653 33 34455541 2489999876
Q ss_pred CCcccHHHHHHHHHcCCeEEEe
Q 018020 82 PTSMHVKWAISVAQKKKHLLME 103 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk~V~~E 103 (362)
--+...+.+.+|.++|.+|+.|
T Consensus 75 gi~~~~p~~~~a~~~gi~v~~~ 96 (326)
T 3eag_A 75 VAKRGMDVVEAILNLGLPYISG 96 (326)
T ss_dssp TCCTTCHHHHHHHHTTCCEEEH
T ss_pred CcCCCCHHHHHHHHcCCcEEeH
Confidence 6666667788899999999976
No 330
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.30 E-value=0.012 Score=55.01 Aligned_cols=63 Identities=13% Similarity=0.143 Sum_probs=49.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
.+|+|+|+|.+|+..+..++.. +++|+ ++|+++.++.. +...|. -+.++++++.. .|+|+.++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-Ga~Vi-v~D~dp~ra~~-A~~~G~-----~v~~Leeal~~--ADIVi~at 283 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-GSIVY-VTEIDPICALQ-ACMDGF-----RLVKLNEVIRQ--VDIVITCT 283 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHH-HHHTTC-----EECCHHHHTTT--CSEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEE-EEeCChhhhHH-HHHcCC-----EeccHHHHHhc--CCEEEECC
Confidence 5899999999999999999887 78855 79999876544 334453 24689999985 89999963
No 331
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.30 E-value=0.0057 Score=55.81 Aligned_cols=65 Identities=20% Similarity=0.305 Sum_probs=49.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..++||||+|.+|+..++.++.. +++++ .+|+.... . ..+.+ ..+.+++++|+. .|+|++.+|-.
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~f-g~~v~-~~d~~~~~--~-~~~~~-----~~~~~l~ell~~--sDivslh~Plt 205 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAF-GMKVL-CYDVVKRE--D-LKEKG-----CVYTSLDELLKE--SDVISLHVPYT 205 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCH--H-HHHTT-----CEECCHHHHHHH--CSEEEECCCCC
T ss_pred CcEEEEECcchHHHHHHHhhccc-Cceee-ecCCccch--h-hhhcC-----ceecCHHHHHhh--CCEEEEcCCCC
Confidence 35899999999999999999877 78877 57775432 1 22334 247899999986 89999998854
No 332
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.29 E-value=0.041 Score=50.76 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=60.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCcccH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTSMHV 87 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~~h~ 87 (362)
-+|.|+|+|.+|...++.++.. ++++++ .++++++.+.+.+++|.. .+.-+.+.+.+.+. ..+|+|+.++......
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~-~~~~~~~~~~~~~~lGa~-~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~ 265 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF-GSKVTV-ISTSPSKKEEALKNFGAD-SFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL 265 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE-EESCGGGHHHHHHTSCCS-EEEETTCHHHHHHTTTCEEEEEECCSSCCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEE-EeCCHHHHHHHHHhcCCc-eEEeccCHHHHHHhhCCCCEEEECCCcHHHH
Confidence 4789999999999988888876 678664 556777777666677743 11123443333221 3699999999876555
Q ss_pred HHHHHHHHcC-CeEEE
Q 018020 88 KWAISVAQKK-KHLLM 102 (362)
Q Consensus 88 ~~~~~al~~g-k~V~~ 102 (362)
+.+..+++.| +-|.+
T Consensus 266 ~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 266 LPLFGLLKSHGKLILV 281 (366)
T ss_dssp HHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhcCCEEEEE
Confidence 6667777665 43443
No 333
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.29 E-value=0.0058 Score=53.41 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=27.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS 42 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~ 42 (362)
..||.|||+|..|...+..|... ++.-+.++|.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCC
Confidence 46899999999999999999877 55455677764
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.28 E-value=0.049 Score=50.11 Aligned_cols=87 Identities=15% Similarity=0.059 Sum_probs=59.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHH----HhcCCCCcEEEEc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEA----LLDDKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e----~l~~~~~D~V~i~ 80 (362)
-+|.|+|+|.+|...+..++.. ++++++ .++++++.+. ++++|.. .++ .++.+ +.....+|+|+.+
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~-~~~~~~~~~~-~~~lGa~---~vi~~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT-GAEVIV-TSSSREKLDR-AFALGAD---HGINRLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT-TCEEEE-EESCHHHHHH-HHHHTCS---EEEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEE-EecCchhHHH-HHHcCCC---EEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 4799999999999888888876 678775 4677776665 5667753 222 23333 2333479999999
Q ss_pred CCCcccHHHHHHHHHcC-CeEEE
Q 018020 81 LPTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~g-k~V~~ 102 (362)
+. ......+.++++.| +-|++
T Consensus 265 ~g-~~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 265 AG-GAGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp TT-SSCHHHHHHHEEEEEEEEEE
T ss_pred CC-hHHHHHHHHHhhcCCEEEEE
Confidence 88 45566777777765 44444
No 335
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.19 E-value=0.007 Score=55.30 Aligned_cols=77 Identities=22% Similarity=0.121 Sum_probs=44.7
Q ss_pred CCceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCH----HHHHHHHH--HcCCC---CCCcccCCHHHHhcCCCC
Q 018020 5 SQAAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSL----EKATNFAK--ANNFP---PDAKVYGSYEALLDDKDI 74 (362)
Q Consensus 5 ~~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~----~~~~~~~~--~~~~~---~~~~~~~~~~e~l~~~~~ 74 (362)
+|.+++|.|+|+ |++|...+..|.+. +.+|+++. |++ ++.+.+.. ..++. -+..-.+++.++++..++
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~-R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDA-HRPTYILA-RPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEE-CSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEE-CCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 355679999998 99999999999877 47777554 433 44443222 12221 011112334455663469
Q ss_pred cEEEEcCCC
Q 018020 75 DAVYLPLPT 83 (362)
Q Consensus 75 D~V~i~~~~ 83 (362)
|+|+.+...
T Consensus 85 d~Vi~~a~~ 93 (346)
T 3i6i_A 85 DIVVSTVGG 93 (346)
T ss_dssp CEEEECCCG
T ss_pred CEEEECCch
Confidence 999987765
No 336
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.17 E-value=0.033 Score=51.18 Aligned_cols=91 Identities=16% Similarity=0.150 Sum_probs=60.6
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCcccH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTSMHV 87 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~~h~ 87 (362)
-+|.|+|+|.+|...++.++.. ++++++ .++++++.+.+.+++|.. .+.-+.+.+.+.+. ..+|+|+.++......
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~-~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~g~D~vid~~g~~~~~ 258 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAM-GHHVTV-ISSSNKKREEALQDLGAD-DYVIGSDQAKMSELADSLDYVIDTVPVHHAL 258 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEE-EESSTTHHHHHHTTSCCS-CEEETTCHHHHHHSTTTEEEEEECCCSCCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEE-EeCChHHHHHHHHHcCCc-eeeccccHHHHHHhcCCCCEEEECCCChHHH
Confidence 4799999999999888887766 677665 556666666655578753 11223444444322 3699999999876666
Q ss_pred HHHHHHHHcC-CeEEE
Q 018020 88 KWAISVAQKK-KHLLM 102 (362)
Q Consensus 88 ~~~~~al~~g-k~V~~ 102 (362)
+.+..+++.| +-|++
T Consensus 259 ~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 259 EPYLSLLKLDGKLILM 274 (357)
T ss_dssp HHHHTTEEEEEEEEEC
T ss_pred HHHHHHhccCCEEEEe
Confidence 6677777665 44444
No 337
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.17 E-value=0.0025 Score=58.15 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=49.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..+|||||+|.||+..++.++.. +++|+ ++|++++.. + ++. ..+.+++++++. .|+|++++|..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G~~V~-~~d~~~~~~--~-~~~------~~~~~l~ell~~--aDvV~~~~p~t 209 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM-GATVI-GEDVFEIKG--I-EDY------CTQVSLDEVLEK--SDIITIHAPYI 209 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSCCCS--C-TTT------CEECCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEE-EECCCccHH--H-Hhc------cccCCHHHHHhh--CCEEEEecCCc
Confidence 46899999999999999999877 78866 688876432 1 111 125699999985 99999998864
No 338
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=96.17 E-value=0.014 Score=54.48 Aligned_cols=85 Identities=21% Similarity=0.205 Sum_probs=59.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHH-----HHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLE-----KATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
--+|+|||+|+-|..|+..|++. +++|+. .-|... +..+-|++-|+. + .++.|..+. .|+|.+.+|
T Consensus 37 gK~IaVIGyGsQG~AqAlNLRDS-Gv~V~V-glr~~s~~e~~~S~~~A~~~Gf~----v-~~~~eA~~~--ADvV~~L~P 107 (491)
T 3ulk_A 37 GKKVVIVGCGAQGLNQGLNMRDS-GLDISY-ALRKEAIAEKRASWRKATENGFK----V-GTYEELIPQ--ADLVINLTP 107 (491)
T ss_dssp TSEEEEESCSHHHHHHHHHHHHT-TCEEEE-EECHHHHHTTCHHHHHHHHTTCE----E-EEHHHHGGG--CSEEEECSC
T ss_pred CCEEEEeCCChHhHHHHhHHHhc-CCcEEE-EeCCCCcccccchHHHHHHCCCE----e-cCHHHHHHh--CCEEEEeCC
Confidence 45899999999999999999988 777663 323111 223344555652 3 378888885 999999999
Q ss_pred CcccHHHHHH---HHHcCCeEE
Q 018020 83 TSMHVKWAIS---VAQKKKHLL 101 (362)
Q Consensus 83 ~~~h~~~~~~---al~~gk~V~ 101 (362)
...|..+... .|+.|+.+.
T Consensus 108 D~~q~~vy~~I~p~lk~G~~L~ 129 (491)
T 3ulk_A 108 DKQHSDVVRTVQPLMKDGAALG 129 (491)
T ss_dssp GGGHHHHHHHHGGGSCTTCEEE
T ss_pred hhhHHHHHHHHHhhCCCCCEEE
Confidence 9999877654 233455444
No 339
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.16 E-value=0.0048 Score=55.78 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=45.8
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-----CCCCCccc-CCHHHHhcCCCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-----FPPDAKVY-GSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-----~~~~~~~~-~~~~e~l~~~~~D~V~i~~~ 82 (362)
|||+|||+|.+|...+..+...+-+.-+.++|+++++++..+.++. ....+.+. ++..+.++ +.|+|+++.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~--~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTE--DSDVCIITAG 78 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGT--TCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhC--CCCEEEECCC
Confidence 6899999999999988877655434335589998877653322211 00112333 23334444 4999999876
Q ss_pred Cc
Q 018020 83 TS 84 (362)
Q Consensus 83 ~~ 84 (362)
.+
T Consensus 79 ~~ 80 (314)
T 3nep_X 79 LP 80 (314)
T ss_dssp C-
T ss_pred CC
Confidence 54
No 340
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.15 E-value=0.014 Score=55.79 Aligned_cols=64 Identities=13% Similarity=0.059 Sum_probs=50.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
..+|+|||+|.+|+..++.++.. +++|+ ++|+++.+.... ...|. . +.++++++.. .|+|++++
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~-G~~V~-v~d~~~~~~~~a-~~~G~----~-~~~l~ell~~--aDiVi~~~ 340 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGL-GATVW-VTEIDPICALQA-AMEGY----R-VVTMEYAADK--ADIFVTAT 340 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEE-EECSCHHHHHHH-HTTTC----E-ECCHHHHTTT--CSEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC-CCEEE-EEeCChHhHHHH-HHcCC----E-eCCHHHHHhc--CCEEEECC
Confidence 46899999999999999999887 78866 789998764332 23343 2 4589999985 99999986
No 341
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.11 E-value=0.013 Score=55.86 Aligned_cols=64 Identities=13% Similarity=0.044 Sum_probs=50.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
..+|+|||+|.+|+..++.++.. +++|+ ++|+++.+.... ...|+ .+.++++++.. .|+|++++
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~-G~~Vi-v~d~~~~~~~~a-~~~g~-----~~~~l~ell~~--aDiVi~~~ 320 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGL-GARVY-ITEIDPICAIQA-VMEGF-----NVVTLDEIVDK--GDFFITCT 320 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH-TCEEE-EECSCHHHHHHH-HTTTC-----EECCHHHHTTT--CSEEEECC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-cCEEE-EEeCChhhHHHH-HHcCC-----EecCHHHHHhc--CCEEEECC
Confidence 46899999999999999999877 78866 789998765332 23343 24689999985 99999985
No 342
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=96.11 E-value=0.01 Score=53.01 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=47.1
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc-------CCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN-------NFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
|||+|||+|.+|...+..+...+-+.-+.++|.++++++-.+.++ +..+.....+|+++ ++ +.|+|+|+.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~-~~--~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL-LK--GSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGG-GT--TCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHH-hC--CCCEEEEec
Confidence 789999999999988877765555444559999987766444332 11111223456654 44 489999975
Q ss_pred C
Q 018020 82 P 82 (362)
Q Consensus 82 ~ 82 (362)
-
T Consensus 78 G 78 (294)
T 2x0j_A 78 G 78 (294)
T ss_dssp C
T ss_pred C
Confidence 3
No 343
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.10 E-value=0.0067 Score=61.24 Aligned_cols=74 Identities=8% Similarity=0.018 Sum_probs=51.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH----------HcCCCC---------CCcccCCHHHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK----------ANNFPP---------DAKVYGSYEAL 68 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~----------~~~~~~---------~~~~~~~~~e~ 68 (362)
..||+|||+|.||...+..+.+. +++|+ ++|+++++++...+ +.|... .+...+|+ +.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a-G~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~ 390 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK-GTPIL-MKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GD 390 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT-TCCEE-EECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TT
T ss_pred CCEEEEECCChhhHHHHHHHHhC-CCEEE-EEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HH
Confidence 46799999999999999988776 67755 89999987765311 112100 01245566 44
Q ss_pred hcCCCCcEEEEcCCCccc
Q 018020 69 LDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 69 l~~~~~D~V~i~~~~~~h 86 (362)
++ ++|+|+.++|....
T Consensus 391 ~~--~aDlVIeaV~e~~~ 406 (715)
T 1wdk_A 391 FG--NVDLVVEAVVENPK 406 (715)
T ss_dssp GG--GCSEEEECCCSCHH
T ss_pred HC--CCCEEEEcCCCCHH
Confidence 55 49999999998764
No 344
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.10 E-value=0.01 Score=53.92 Aligned_cols=74 Identities=8% Similarity=-0.018 Sum_probs=49.5
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc------CCCCCCcccCCHHHHhcCCCCcEEEEc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN------NFPPDAKVYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~------~~~~~~~~~~~~~e~l~~~~~D~V~i~ 80 (362)
..+||+|||+|.+|...+..+...+-+.-+.++|+++++++..+.+. .........+|+++ ++ +.|+|+++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~--daDiVIit 96 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SA--GSKLVVIT 96 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CS--SCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hC--CCCEEEEe
Confidence 35899999999999988887765543333558999998776543322 11112223467776 55 49999998
Q ss_pred CCC
Q 018020 81 LPT 83 (362)
Q Consensus 81 ~~~ 83 (362)
...
T Consensus 97 aG~ 99 (330)
T 3ldh_A 97 AGA 99 (330)
T ss_dssp CSC
T ss_pred CCC
Confidence 543
No 345
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.08 E-value=0.017 Score=52.14 Aligned_cols=75 Identities=17% Similarity=0.130 Sum_probs=48.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CC---CCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FP---PDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~---~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
+||+|||+|++|...+..+...+-+.-+.++|+++++++..+.++. .. ..+++..+-.+.++ +.|+|+++.+..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~--~aD~Vii~ag~~ 78 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLE--GARAVVLAAGVA 78 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGT--TEEEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhC--CCCEEEECCCCC
Confidence 5899999999999877776655434445589999988876555432 10 12233222233455 499999987765
Q ss_pred c
Q 018020 85 M 85 (362)
Q Consensus 85 ~ 85 (362)
.
T Consensus 79 ~ 79 (310)
T 2xxj_A 79 Q 79 (310)
T ss_dssp C
T ss_pred C
Confidence 3
No 346
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=96.05 E-value=0.011 Score=56.49 Aligned_cols=70 Identities=13% Similarity=0.186 Sum_probs=49.1
Q ss_pred eEEEEEeccHHHH--HHHHHHhcCCC-----cEEEEEEcCCHHHHHH-------HHHHcCCCCCCcccCCHHHHhcCCCC
Q 018020 9 IRFGIIGAADIAR--KLSRAITLAPN-----AVLSAVASRSLEKATN-------FAKANNFPPDAKVYGSYEALLDDKDI 74 (362)
Q Consensus 9 ~~v~iiG~G~~g~--~~~~~~~~~~~-----~~vv~v~d~~~~~~~~-------~~~~~~~~~~~~~~~~~~e~l~~~~~ 74 (362)
|||+|||+|+.|. .++..+...+. .+ +.++|.++++++. ..+..|.+..+..++|.++.|++ .
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~e-i~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~g--A 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTH-IYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEG--A 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCE-EEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTT--C
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCE-EEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCC--C
Confidence 6899999998654 34444443332 34 5599999988654 34445655445667999999986 9
Q ss_pred cEEEEcC
Q 018020 75 DAVYLPL 81 (362)
Q Consensus 75 D~V~i~~ 81 (362)
|+|+++.
T Consensus 78 D~Vi~~~ 84 (477)
T 3u95_A 78 DFIINTA 84 (477)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 9999875
No 347
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.05 E-value=0.063 Score=48.86 Aligned_cols=91 Identities=18% Similarity=0.046 Sum_probs=64.1
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHHh----cCCCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEALL----DDKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~l----~~~~~D~V~i~~~ 82 (362)
-+|.|+|+|.+|...+..++.. +...+.++|+++++.+ +++++|... +..+ .+..+.. +...+|+|+.++.
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~-~a~~lGa~~-~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVAL-GAKSVTAIDISSEKLA-LAKSFGAMQ-TFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHH-HHHHTTCSE-EEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CEEEEECCCCcchHHHHHHHHc-CCcEEEEEechHHHHH-HHHHcCCeE-EEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 4689999999999888888877 6666667888887654 567888531 1111 2333332 2356899999998
Q ss_pred CcccHHHHHHHHHcCCeEEE
Q 018020 83 TSMHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~ 102 (362)
.....+.+..+++.|-.+.+
T Consensus 239 ~~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 239 VPQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp SHHHHHHHHHHCCTTCEEEE
T ss_pred ccchhhhhhheecCCeEEEE
Confidence 88888888888888755543
No 348
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.05 E-value=0.0084 Score=54.06 Aligned_cols=118 Identities=19% Similarity=0.211 Sum_probs=71.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC---HHHHHHHHHHcCCCCC--Cc--ccCCH---HHHhcCCCCcEE
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS---LEKATNFAKANNFPPD--AK--VYGSY---EALLDDKDIDAV 77 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~---~~~~~~~~~~~~~~~~--~~--~~~~~---~e~l~~~~~D~V 77 (362)
.-++.|+|+|.+|+..+..|.+. ++.-+.|++|+ .+++++++++++...+ +. -+.+. .+.+.. .|+|
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~--~DiI 224 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS--ADIL 224 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH--CSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC--ceEE
Confidence 34799999999999999988877 66445589999 8889888876531000 11 13443 444553 8999
Q ss_pred EEcCCCcccHH----HH--HHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeee
Q 018020 78 YLPLPTSMHVK----WA--ISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTM 132 (362)
Q Consensus 78 ~i~~~~~~h~~----~~--~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~ 132 (362)
|.+||...+.. +. ...+. ...+++| +..++.+ -.+++.|++.|+++.-|..
T Consensus 225 INaTp~Gm~~~~~~~~~~~~~~l~-~~~~v~D--~vY~P~~-T~ll~~A~~~G~~~~~Gl~ 281 (312)
T 3t4e_A 225 TNGTKVGMKPLENESLIGDVSLLR-PELLVTE--CVYNPHM-TKLLQQAQQAGCKTIDGYG 281 (312)
T ss_dssp EECSSTTSTTSTTCCSCCCGGGSC-TTCEEEE--CCCSSSS-CHHHHHHHHTTCEEECHHH
T ss_pred EECCcCCCCCCCCCcccCCHHHcC-CCCEEEE--eccCCCC-CHHHHHHHHCCCeEECcHH
Confidence 99999865321 00 11222 2344444 3333322 3455666777776655543
No 349
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=96.04 E-value=0.023 Score=51.70 Aligned_cols=98 Identities=16% Similarity=0.108 Sum_probs=67.9
Q ss_pred eeEEEEEeccHHHHHHHHH----HhcCCCcEEEEEEcC--CHHHHHHHHHHc----C-CCCCC-----------------
Q 018020 8 AIRFGIIGAADIARKLSRA----ITLAPNAVLSAVASR--SLEKATNFAKAN----N-FPPDA----------------- 59 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~----~~~~~~~~vv~v~d~--~~~~~~~~~~~~----~-~~~~~----------------- 59 (362)
++||||=|+|.||+-..++ +...+++++|+|-|+ +.+....+-+ | | ++..+
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llk-yDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMR-YDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHH-EETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhc-ccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 5899999999999988888 555678999999995 5554444322 2 1 11011
Q ss_pred -----cccC---CHHHH-hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEEeCCC
Q 018020 60 -----KVYG---SYEAL-LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLMEKPM 106 (362)
Q Consensus 60 -----~~~~---~~~e~-l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~EKP~ 106 (362)
.++. +++++ ..+.++|+|+-+|......+.+...+++| |.|++--|.
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps 137 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPA 137 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCC
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCC
Confidence 1111 22221 11226999999999999999999999999 778887774
No 350
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.03 E-value=0.011 Score=53.82 Aligned_cols=74 Identities=12% Similarity=0.083 Sum_probs=49.4
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC----CC--CCCcccCCHHHHhcCCCCcEEEE
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN----FP--PDAKVYGSYEALLDDKDIDAVYL 79 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~----~~--~~~~~~~~~~e~l~~~~~D~V~i 79 (362)
+..+||+|||+|.+|...+..+...+-+.-+.++|+++++++..+.++. ++ +......|+++ ++ +.|+|++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~~--~aDiVvi 93 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-TA--NSKLVII 93 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-GT--TEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-hC--CCCEEEE
Confidence 4568999999999999887776655433335589999988776544431 11 11222467764 55 4999998
Q ss_pred cCC
Q 018020 80 PLP 82 (362)
Q Consensus 80 ~~~ 82 (362)
+..
T Consensus 94 ~aG 96 (331)
T 4aj2_A 94 TAG 96 (331)
T ss_dssp CCS
T ss_pred ccC
Confidence 753
No 351
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.01 E-value=0.01 Score=51.10 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=66.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc--CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD--DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~--~~~~D~V~i~~~ 82 (362)
+.+|.|+|+|.+|...+..|.+. +. ++ ++|+++++.+.+. .++. .++ ++.+.+-+ -.+.|+|+++++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~-g~-v~-vid~~~~~~~~~~--~~~~---~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS-EV-FV-LAEDENVRKKVLR--SGAN---FVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS-EE-EE-EESCGGGHHHHHH--TTCE---EEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CCEEEEECCChHHHHHHHHHHhC-Ce-EE-EEECCHHHHHHHh--cCCe---EEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 56899999999999999998766 45 44 7799988887765 4432 222 33333321 247999999999
Q ss_pred CcccHHHHHH-HHHcC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 83 TSMHVKWAIS-VAQKK--KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 83 ~~~h~~~~~~-al~~g--k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+......+.. |-+.+ .+|++. +.+.+..+.+ ++.|....
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~---~~~~~~~~~l----~~~G~~~v 122 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAE---AERYENIEQL----RMAGADQV 122 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEE---CSSGGGHHHH----HHHTCSEE
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEE---ECCHhHHHHH----HHCCCCEE
Confidence 8755444433 33445 367763 3444444332 34555443
No 352
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.99 E-value=0.0028 Score=56.67 Aligned_cols=113 Identities=21% Similarity=0.304 Sum_probs=68.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---C---CCcccCCHHHHhcCCCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---P---DAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~---~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
..++.|+|+|.+|+..+..|.+. + +|+ +++|+.++++.++++++.. . .+. ..++.+.+ .++|+|+.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~-G-~V~-v~~r~~~~~~~l~~~~~~~~~~~~~~~~d-~~~~~~~~--~~~DilVn~a 201 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKD-N-NII-IANRTVEKAEALAKEIAEKLNKKFGEEVK-FSGLDVDL--DGVDIIINAT 201 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSS-S-EEE-EECSSHHHHHHHHHHHHHHHTCCHHHHEE-EECTTCCC--TTCCEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHHC-C-CEE-EEECCHHHHHHHHHHHhhhcccccceeEE-EeeHHHhh--CCCCEEEECC
Confidence 35799999999999999999877 4 655 7899999888887765310 0 001 12222222 3699999999
Q ss_pred CCcccHH-----H-HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Q 018020 82 PTSMHVK-----W-AISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDG 130 (362)
Q Consensus 82 ~~~~h~~-----~-~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 130 (362)
+...+.. + -...++.|.. +++ +..++.+ ..+.+.+++.|..+.-|
T Consensus 202 g~~~~~~~~~~~~~~~~~l~~~~~-v~D--v~y~p~~-t~ll~~a~~~G~~~~~G 252 (287)
T 1nvt_A 202 PIGMYPNIDVEPIVKAEKLREDMV-VMD--LIYNPLE-TVLLKEAKKVNAKTING 252 (287)
T ss_dssp CTTCTTCCSSCCSSCSTTCCSSSE-EEE--CCCSSSS-CHHHHHHHTTTCEEECT
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCE-EEE--eeeCCcc-CHHHHHHHHCCCEEeCc
Confidence 8765421 1 1233444443 333 2222222 23666788888775544
No 353
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=95.97 E-value=0.03 Score=47.50 Aligned_cols=90 Identities=18% Similarity=0.071 Sum_probs=57.5
Q ss_pred CCceeEEEEE--eccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCC-------------HHHHh
Q 018020 5 SQAAIRFGII--GAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGS-------------YEALL 69 (362)
Q Consensus 5 ~~~~~~v~ii--G~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~-------------~~e~l 69 (362)
++.++||++. |.|+-....+...+..-+++|++|+...+....+.|+++|+| ...-+ +.+.|
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~gIp---~~~~~~~~~~~r~~~d~~~~~~l 85 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVP---VFTVRLADHPSRDAWDVAITAAT 85 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHTTCC---EEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCchHHHHHHHHcCCC---EEEeCcccccchhhhhHHHHHHH
Confidence 3457899999 666655566666543224788888765444567789999997 22222 23456
Q ss_pred cCCCCcEEEEcCCCcccHHHHHHHHHcC
Q 018020 70 DDKDIDAVYLPLPTSMHVKWAISVAQKK 97 (362)
Q Consensus 70 ~~~~~D~V~i~~~~~~h~~~~~~al~~g 97 (362)
+..++|+++++.-..--.+-+....+.|
T Consensus 86 ~~~~~Dlivlagy~~iL~~~~l~~~~~~ 113 (215)
T 3da8_A 86 AAHEPDLVVSAGFMRILGPQFLSRFYGR 113 (215)
T ss_dssp HTTCCSEEEEEECCSCCCHHHHHHHTTT
T ss_pred HhhCCCEEEEcCchhhCCHHHHhhccCC
Confidence 6678999999876554444444444433
No 354
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.96 E-value=0.049 Score=51.87 Aligned_cols=89 Identities=18% Similarity=0.086 Sum_probs=58.1
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCC--H------------------HH
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGS--Y------------------EA 67 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~------------------~e 67 (362)
-+|.|+|+ |.+|...+..++.. +++++++. +++++++. ++++|... +.-+.+ + ++
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~-~~~~~~~~-~~~lGa~~-vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG-GANPICVV-SSPQKAEI-CRAMGAEA-IIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEE-SSHHHHHH-HHHHTCCE-EEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCeEEEEE-CCHHHHHH-HHhhCCcE-EEecCcCcccccccccccchHHHHHHHHH
Confidence 46999998 99999888888776 78888665 67776664 46677531 011111 0 22
Q ss_pred H---hcCCCCcEEEEcCCCcccHHHHHHHHHcC-CeEEE
Q 018020 68 L---LDDKDIDAVYLPLPTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 68 ~---l~~~~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~ 102 (362)
+ .....+|+|+.++.. .....+..+++.| +-|++
T Consensus 306 i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPGR-ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCCcEEEEE
Confidence 2 222479999999887 6666777777665 33443
No 355
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=95.93 E-value=0.037 Score=56.18 Aligned_cols=117 Identities=7% Similarity=0.059 Sum_probs=80.1
Q ss_pred CceeEEEEEeccHHHHHHHHHHh------cCCCcEEEEEEcCCHHH-HHHHHHHcCCC-CCCcccCCHHHHhcC-CCCcE
Q 018020 6 QAAIRFGIIGAADIARKLSRAIT------LAPNAVLSAVASRSLEK-ATNFAKANNFP-PDAKVYGSYEALLDD-KDIDA 76 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~------~~~~~~vv~v~d~~~~~-~~~~~~~~~~~-~~~~~~~~~~e~l~~-~~~D~ 76 (362)
.+..||.+-|+-.- +...+. +.++.++|+.+++...- -+.+ .+|.+ -+..+|.|+.++.+. +++|+
T Consensus 494 ~~~trviV~G~tg~---~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~--~~G~~~~Gvp~y~sv~ea~~~~p~~Dl 568 (829)
T 3pff_A 494 SRHTKAIVWGMQTR---AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKF--YWGHKEILIPVFKNMADAMRKHPEVDV 568 (829)
T ss_dssp CTTCCEEEESCCHH---HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEE--EETTEEEEEEEESSHHHHHHHCTTCCE
T ss_pred cCCCeEEEECCcHH---HHHHHHHhcccccCCCCcEEEEEcCCCCCccceE--EecCCcCCcccCCcHHHHhhccCCCcE
Confidence 35689999997532 333332 23567889999876420 0000 01110 023589999999875 47999
Q ss_pred EEEcCCCcccHHHHHHHHH-cCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 77 VYLPLPTSMHVKWAISVAQ-KKKH-LLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 77 V~i~~~~~~h~~~~~~al~-~gk~-V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
++|++|+..-...+.+|++ +|.+ ++|=. -.....+.++|.+.|+++|+.++
T Consensus 569 aVI~vP~~~v~~av~ea~~~~Gvk~~Viis-~Gf~e~~~~~l~~~A~~~g~rli 621 (829)
T 3pff_A 569 LINFASLRSAYDSTMETMNYAQIRTIAIIA-EGIPEALTRKLIKKADQKGVTII 621 (829)
T ss_dssp EEECCCTTTHHHHHHHHTTSTTCCEEEECC-SCCCHHHHHHHHHHHHHHTCEEE
T ss_pred EEEeCCHHHHHHHHHHHHhhCCCCEEEEeC-CCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999999999999999999 9944 54421 23456778899999999998654
No 356
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.90 E-value=0.013 Score=50.29 Aligned_cols=91 Identities=10% Similarity=0.249 Sum_probs=54.7
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCccc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMH 86 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h 86 (362)
.+|||+|||+|.||..++..|++. +.+|+ ++++. ++ +. +.| ++++|+..-
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~-G~~V~-~~~~~-----------------------~~-~~--~aD--ilavP~~ai 54 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV-GHYVT-VLHAP-----------------------ED-IR--DFE--LVVIDAHGV 54 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT-TCEEE-ECSSG-----------------------GG-GG--GCS--EEEECSSCH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC-CCEEE-EecCH-----------------------HH-hc--cCC--EEEEcHHHH
Confidence 468999999999999999999877 67776 45541 12 23 356 778888766
Q ss_pred HHHHHHHHHcC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEee
Q 018020 87 VKWAISVAQKK--KHLLMEKPMALNVAEFDVILNACEENGVQLMDGT 131 (362)
Q Consensus 87 ~~~~~~al~~g--k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~ 131 (362)
.+++......- ..+++.--.+... ++++.+...|..+..++
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~~~----~vl~~~~~~g~~fvg~H 97 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTHGI----TVMDPLETSGGIVMSAH 97 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSCCG----GGGHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECCcCHH----HHHHHHHhCCCcEEEee
Confidence 66665544321 2345543222222 23334445666554333
No 357
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.86 E-value=0.024 Score=51.20 Aligned_cols=73 Identities=12% Similarity=0.071 Sum_probs=46.3
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCC--HHHHHHHHHHc-------CCCCCCcccCCHHHHhcCCCCc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNA-VLSAVASRS--LEKATNFAKAN-------NFPPDAKVYGSYEALLDDKDID 75 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~--~~~~~~~~~~~-------~~~~~~~~~~~~~e~l~~~~~D 75 (362)
|+..||+|||+|.+|...+..+... +. +|+ ++|++ +++++..+.+. +....+...+++++ ++ +.|
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-g~~~v~-l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a-~~--~aD 80 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-ELADVV-LVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYAD-TA--DSD 80 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCCEEE-EECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGG-GT--TCS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-CCCeEE-EEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHH-hC--CCC
Confidence 3467999999999999988887665 34 544 89998 55554332221 11111222355543 44 499
Q ss_pred EEEEcCCC
Q 018020 76 AVYLPLPT 83 (362)
Q Consensus 76 ~V~i~~~~ 83 (362)
+|+++...
T Consensus 81 vVIiaag~ 88 (315)
T 3tl2_A 81 VVVITAGI 88 (315)
T ss_dssp EEEECCSC
T ss_pred EEEEeCCC
Confidence 99998643
No 358
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.86 E-value=0.0066 Score=51.49 Aligned_cols=94 Identities=15% Similarity=0.256 Sum_probs=60.7
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC-CCCcccCC-HHHHhcC-CCCcEEEEcCCCc
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP-PDAKVYGS-YEALLDD-KDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~-~~~~~~~~-~~e~l~~-~~~D~V~i~~~~~ 84 (362)
|||.|+| +|++|...+..|.+. +.+|++ .+|++++.+.. .++. -... ..| .+++.+. .++|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~---~~~~~~~~D-~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT-DYQIYA-GARKVEQVPQY---NNVKAVHFD-VDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS-SCEEEE-EESSGGGSCCC---TTEEEEECC-TTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHC-CCEEEE-EECCccchhhc---CCceEEEec-ccCCHHHHHHHHcCCCEEEECCcCC
Confidence 4799999 588999999999876 688775 55766543321 1110 0001 223 4433221 3699999877654
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV 125 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~ 125 (362)
. +..+..++.....+++++++.++
T Consensus 75 ~-----------------~~~~~~n~~~~~~l~~a~~~~~~ 98 (219)
T 3dqp_A 75 G-----------------KSLLKVDLYGAVKLMQAAEKAEV 98 (219)
T ss_dssp T-----------------SSCCCCCCHHHHHHHHHHHHTTC
T ss_pred C-----------------CCcEeEeHHHHHHHHHHHHHhCC
Confidence 3 23567788888999999988775
No 359
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.82 E-value=0.015 Score=51.90 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=28.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL 43 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~ 43 (362)
+..||.|||+|..|...+..|... ++.-+.++|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 357999999999999999988776 444455778754
No 360
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.79 E-value=0.018 Score=53.06 Aligned_cols=72 Identities=10% Similarity=0.121 Sum_probs=51.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCc-cc---CCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAK-VY---GSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~-~~---~~~~e~l~~~~~D~V~i~~~~ 83 (362)
.-+|+|+|+|.+|...+..++.. +++|+ ++|+++++++.+.+.++.. +. .. .++.+.+. ++|+|+.+++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-Ga~V~-v~dr~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~DvVI~~~~~ 240 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-GAQVQ-IFDINVERLSYLETLFGSR--VELLYSNSAEIETAVA--EADLLIGAVLV 240 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESCHHHHHHHHHHHGGG--SEEEECCHHHHHHHHH--TCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEE-EEeCCHHHHHHHHHhhCce--eEeeeCCHHHHHHHHc--CCCEEEECCCc
Confidence 46899999999999999999888 56644 7899999988876655311 10 11 23445554 59999999876
Q ss_pred cc
Q 018020 84 SM 85 (362)
Q Consensus 84 ~~ 85 (362)
..
T Consensus 241 ~~ 242 (361)
T 1pjc_A 241 PG 242 (361)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 361
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.74 E-value=0.021 Score=54.30 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=60.7
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH----HHHHHHHHHcCCCCCCccc--CCHHHHhcCCCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL----EKATNFAKANNFPPDAKVY--GSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~----~~~~~~~~~~~~~~~~~~~--~~~~e~l~~~~~D~V~i~~ 81 (362)
..||.+||.|..|...+..|.+. +++|. ++|... ...+.+ ++.|++ ++ .+.+++++. ++|+|+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~-G~~V~-~~D~~~~~~~~~~~~L-~~~gi~----~~~g~~~~~~~~~-~~d~vv~sp 80 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL-GAIVT-VNDGKPFDENPTAQSL-LEEGIK----VVCGSHPLELLDE-DFCYMIKNP 80 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT-TCEEE-EEESSCGGGCHHHHHH-HHTTCE----EEESCCCGGGGGS-CEEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEE-EEeCCcccCChHHHHH-HhCCCE----EEECCChHHhhcC-CCCEEEECC
Confidence 46899999999998888888877 78866 577633 223333 345653 32 233345442 389999877
Q ss_pred CCcccHHHHHHHHHcCCeEEEe
Q 018020 82 PTSMHVKWAISVAQKKKHLLME 103 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk~V~~E 103 (362)
--..+.+.+.+|.++|.+|+.|
T Consensus 81 gi~~~~p~~~~a~~~gi~v~~~ 102 (451)
T 3lk7_A 81 GIPYNNPMVKKALEKQIPVLTE 102 (451)
T ss_dssp TSCTTSHHHHHHHHTTCCEECH
T ss_pred cCCCCChhHHHHHHCCCcEEeH
Confidence 6666667788899999999854
No 362
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=95.71 E-value=0.026 Score=50.97 Aligned_cols=77 Identities=16% Similarity=0.187 Sum_probs=52.2
Q ss_pred CCceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CH----------HHHHHHHHHcCCCC-CCcccC--CHHHHhc
Q 018020 5 SQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SL----------EKATNFAKANNFPP-DAKVYG--SYEALLD 70 (362)
Q Consensus 5 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~----------~~~~~~~~~~~~~~-~~~~~~--~~~e~l~ 70 (362)
||++|||.++|+...+...+..|.+. +++|++|+.. +. ...+.+|+++|+|- ...-+. ++.+.|+
T Consensus 4 m~~~mrivf~Gt~~fa~~~L~~L~~~-~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~ 82 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDFAARHLAALLSS-EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESKQQLA 82 (318)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTS-SSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHHHHHHHH
T ss_pred cccCCEEEEEecCHHHHHHHHHHHHC-CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHHHHHHHH
Confidence 35689999999999888888888765 6899999863 22 12467899999971 001112 2334566
Q ss_pred CCCCcEEEEcCC
Q 018020 71 DKDIDAVYLPLP 82 (362)
Q Consensus 71 ~~~~D~V~i~~~ 82 (362)
..++|+++++.-
T Consensus 83 ~~~~Dliv~~~y 94 (318)
T 3q0i_A 83 ALNADLMVVVAY 94 (318)
T ss_dssp TTCCSEEEESSC
T ss_pred hcCCCEEEEeCc
Confidence 778999998743
No 363
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.71 E-value=0.14 Score=41.32 Aligned_cols=113 Identities=12% Similarity=0.054 Sum_probs=62.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH---HcCCCCCCcccCCHHHHhcC--CCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK---ANNFPPDAKVYGSYEALLDD--KDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~e~l~~--~~~D~V~i~~ 81 (362)
...+|.-||||. |.......+..|+.+++ .+|.+++..+...+ +.+++..+.+..+..+.+.. ..+|+|++..
T Consensus 25 ~~~~vldiG~G~-G~~~~~l~~~~~~~~v~-~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 25 PHETLWDIGGGS-GSIAIEWLRSTPQTTAV-CFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TTEEEEEESTTT-THHHHHHHTTSSSEEEE-EECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCCeEEEeCCCC-CHHHHHHHHHCCCCeEE-EEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 356899999997 65555555566778877 67899876655443 34543222233455444444 5799999765
Q ss_pred CCcc--cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 82 PTSM--HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 82 ~~~~--h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
+.+. -.+.+.+.|+.|-.+++.- .+.+....+.+..++.+
T Consensus 103 ~~~~~~~l~~~~~~L~~gG~l~~~~---~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 103 GLTAPGVFAAAWKRLPVGGRLVANA---VTVESEQMLWALRKQFG 144 (178)
T ss_dssp -TTCTTHHHHHHHTCCTTCEEEEEE---CSHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHhcCCCCEEEEEe---eccccHHHHHHHHHHcC
Confidence 4432 2333334444454444422 23444444444444444
No 364
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.70 E-value=0.019 Score=52.21 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=45.5
Q ss_pred CceeEEEEEe-ccHHHHHHHHHHhcCCC-cEEEEEEcCCHHHHH--HHHHHcCCCCCCcc---cCCHHHHhcCCCCcEEE
Q 018020 6 QAAIRFGIIG-AADIARKLSRAITLAPN-AVLSAVASRSLEKAT--NFAKANNFPPDAKV---YGSYEALLDDKDIDAVY 78 (362)
Q Consensus 6 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~-~~vv~v~d~~~~~~~--~~~~~~~~~~~~~~---~~~~~e~l~~~~~D~V~ 78 (362)
.+++||+||| +|++|...+..|...+. .+|+ ++|++++... .+.+ ...+..... .+|+.+.+++ .|+|+
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~-l~Di~~~~~~~~dL~~-~~~~~~v~~~~~t~d~~~al~g--aDvVi 81 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLH-LYDVVNAPGVTADISH-MDTGAVVRGFLGQQQLEAALTG--MDLII 81 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCTTEEEEE-EEESSSHHHHHHHHHT-SCSSCEEEEEESHHHHHHHHTT--CSEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCCCCCEEE-EEeCCCcHhHHHHhhc-ccccceEEEEeCCCCHHHHcCC--CCEEE
Confidence 3578999999 79999988888766533 4544 5887765222 1222 111101122 2366777775 99999
Q ss_pred EcCCCc
Q 018020 79 LPLPTS 84 (362)
Q Consensus 79 i~~~~~ 84 (362)
++.+..
T Consensus 82 ~~ag~~ 87 (326)
T 1smk_A 82 VPAGVP 87 (326)
T ss_dssp ECCCCC
T ss_pred EcCCcC
Confidence 986543
No 365
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.66 E-value=0.1 Score=47.38 Aligned_cols=88 Identities=13% Similarity=0.018 Sum_probs=60.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhc--CCCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLD--DKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~--~~~~D~V~i~~~ 82 (362)
-+|.|+|+|.+|...++.++.. ++++++ .++++++.+ +++++|.. .++ .++.+.+. ...+|+|+.++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~-~~~~~~~~~-~~~~lGa~---~~i~~~~~~~~~~~~~~~g~~d~vid~~g 241 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAM-GLRVAA-VDIDDAKLN-LARRLGAE---VAVNARDTDPAAWLQKEIGGAHGVLVTAV 241 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCEEEE-EESCHHHHH-HHHHTTCS---EEEETTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEE-EeCCHHHHH-HHHHcCCC---EEEeCCCcCHHHHHHHhCCCCCEEEEeCC
Confidence 4689999999999888888877 678775 567777666 45777743 122 23333332 126899999998
Q ss_pred CcccHHHHHHHHHcC-CeEEE
Q 018020 83 TSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 83 ~~~h~~~~~~al~~g-k~V~~ 102 (362)
.....+.+..+++.| +-|++
T Consensus 242 ~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 242 SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp CHHHHHHHHHHEEEEEEEEEC
T ss_pred CHHHHHHHHHHhccCCEEEEe
Confidence 877888888888766 33444
No 366
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.63 E-value=0.029 Score=47.49 Aligned_cols=72 Identities=15% Similarity=0.232 Sum_probs=45.2
Q ss_pred eE-EEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHH-HHHHHHHHc-CCC---CCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 9 IR-FGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLE-KATNFAKAN-NFP---PDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~-v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~-~~~~~~~~~-~~~---~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
+| |.|+|+ |.+|...+..|.+..+.+|+ +.+|+++ +++.++... ++. -+..-.++++++++ ++|+|+.+.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~~a 81 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHIT-LYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFVGA 81 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEE-EEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEESC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEE-EEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc--CCCEEEEcC
Confidence 44 999995 89999999998833478877 4678887 766654221 110 01111133445565 589999877
Q ss_pred CC
Q 018020 82 PT 83 (362)
Q Consensus 82 ~~ 83 (362)
..
T Consensus 82 g~ 83 (221)
T 3r6d_A 82 ME 83 (221)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 367
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.63 E-value=0.12 Score=48.23 Aligned_cols=110 Identities=19% Similarity=0.245 Sum_probs=72.7
Q ss_pred ceeEEEEEeccHHHHHHHHHHhc-CCCcEEEEEEcC----------CHHHHHHHHHHcCCCC---CCcccCCHHHHhcCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITL-APNAVLSAVASR----------SLEKATNFAKANNFPP---DAKVYGSYEALLDDK 72 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~-~~~~~vv~v~d~----------~~~~~~~~~~~~~~~~---~~~~~~~~~e~l~~~ 72 (362)
+..+|+|.|+|.+|...+..|.+ . +++|++|.|. +.+.+.++.++.+.-. +.. +-+.++++..
T Consensus 208 ~g~~vaVqG~GnVG~~~a~~L~e~~-GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~-~~~~~eil~~- 284 (415)
T 2tmg_A 208 KKATVAVQGFGNVGQFAALLISQEL-GSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGE-RITNEELLEL- 284 (415)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSE-EECHHHHTTC-
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhc-CCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCce-EcCchhhhcC-
Confidence 45789999999999988888876 5 8999999998 7888888888765110 111 2256787764
Q ss_pred CCcEEEEcCCCc-ccHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 73 DIDAVYLPLPTS-MHVKWAISVAQKKKHLLMEK---PMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 73 ~~D~V~i~~~~~-~h~~~~~~al~~gk~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
++|+++-|.... .+.+-+.. -+..+++|- |+ + .++.+++ +++|+.+.
T Consensus 285 ~~DIliP~A~~n~i~~~~a~~---l~ak~V~EgAN~p~--t-~~a~~~l---~~~Gi~~~ 335 (415)
T 2tmg_A 285 DVDILVPAALEGAIHAGNAER---IKAKAVVEGANGPT--T-PEADEIL---SRRGILVV 335 (415)
T ss_dssp SCSEEEECSSTTSBCHHHHTT---CCCSEEECCSSSCB--C-HHHHHHH---HHTTCEEE
T ss_pred CCcEEEecCCcCccCcccHHH---cCCeEEEeCCCccc--C-HHHHHHH---HHCCCEEE
Confidence 799999876543 44433332 255566665 43 2 4444443 46676654
No 368
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.62 E-value=0.018 Score=51.89 Aligned_cols=72 Identities=14% Similarity=0.053 Sum_probs=45.8
Q ss_pred EEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc-------CCCCCCcccCCHHHHhcCCCCcEEEEcCC
Q 018020 10 RFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN-------NFPPDAKVYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 10 ~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
||+|||+|.+|...+..+... ++.-+.++|+++++++..+.++ +.+..+..++|+ +.++ +.|+|+++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~--~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMR--GSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT--TCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhC--CCCEEEEeCC
Confidence 699999999999876665433 3322448899887766533332 212222334676 4455 4999999976
Q ss_pred Ccc
Q 018020 83 TSM 85 (362)
Q Consensus 83 ~~~ 85 (362)
...
T Consensus 77 ~~~ 79 (308)
T 2d4a_B 77 IGR 79 (308)
T ss_dssp CCC
T ss_pred CCC
Confidence 554
No 369
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.61 E-value=0.026 Score=51.28 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=28.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL 43 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~ 43 (362)
.-||.|||+|..|...+..|... ++.-+.++|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 57899999999999999999877 555566788753
No 370
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.55 E-value=0.05 Score=49.09 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=49.9
Q ss_pred CCccCCceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH----------HcC-CCC---------CCc
Q 018020 1 MATESQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK----------ANN-FPP---------DAK 60 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~----------~~~-~~~---------~~~ 60 (362)
||.. ..-||+|||+|.||...+..+... +++|+ ++|++++.+++..+ +.| +.. ...
T Consensus 1 Ma~p--~~~~VaViGaG~MG~giA~~~a~~-G~~V~-l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~ 76 (319)
T 3ado_A 1 MASP--AAGDVLIVGSGLVGRSWAMLFASG-GFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLIS 76 (319)
T ss_dssp --------CEEEEECCSHHHHHHHHHHHHT-TCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEE
T ss_pred CCCC--CCCeEEEECCcHHHHHHHHHHHhC-CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcc
Confidence 5543 346899999999999998888766 78866 89999876543211 112 110 112
Q ss_pred ccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 61 VYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 61 ~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
..+|+++.+++ +|+|+=+.|-..
T Consensus 77 ~~~~l~~a~~~--ad~ViEav~E~l 99 (319)
T 3ado_A 77 SCTNLAEAVEG--VVHIQECVPENL 99 (319)
T ss_dssp EECCHHHHTTT--EEEEEECCCSCH
T ss_pred cccchHhHhcc--CcEEeeccccHH
Confidence 35677777775 888887777654
No 371
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.55 E-value=0.13 Score=46.60 Aligned_cols=87 Identities=14% Similarity=0.116 Sum_probs=58.6
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHH----hcCCCCcEEEE
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEAL----LDDKDIDAVYL 79 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~----l~~~~~D~V~i 79 (362)
-+|.|+| +|.+|...+..++.. ++++++ .++++++.+ +++++|.. .++ .++.+. .....+|+|+.
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~-~~~~~~~~~-~~~~~ga~---~~~~~~~~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMK-GAHTIA-VASTDEKLK-IAKEYGAE---YLINASKEDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCEEEE-EESSHHHHH-HHHHTTCS---EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEE-EeCCHHHHH-HHHHcCCc---EEEeCCCchHHHHHHHHhCCCCceEEEE
Confidence 4789999 799999888888876 678775 456777766 56677742 111 233222 22346999999
Q ss_pred cCCCcccHHHHHHHHHcC-CeEEE
Q 018020 80 PLPTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~g-k~V~~ 102 (362)
++.. ...+.+..+++.| +-|++
T Consensus 224 ~~g~-~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 224 SVGK-DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp CCGG-GGHHHHHHHEEEEEEEEEC
T ss_pred CCCh-HHHHHHHHHhccCCEEEEE
Confidence 9886 5666777777766 44444
No 372
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.55 E-value=0.032 Score=50.75 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=48.6
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCc------EEEEEEcCC----HHHHHHHHHHcC---CC--CCCcccCCHHHHhc
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNA------VLSAVASRS----LEKATNFAKANN---FP--PDAKVYGSYEALLD 70 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~------~vv~v~d~~----~~~~~~~~~~~~---~~--~~~~~~~~~~e~l~ 70 (362)
+++||+|+|+ |++|...+..+...+-+ +|+ ++|++ +++++..+.++. .+ .++...+++.+.++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~-l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQ-LLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEE-EEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 4689999998 99999988887665322 555 68998 665554332221 11 12233477888887
Q ss_pred CCCCcEEEEcCC
Q 018020 71 DKDIDAVYLPLP 82 (362)
Q Consensus 71 ~~~~D~V~i~~~ 82 (362)
+ .|+|+++..
T Consensus 83 ~--aD~Vi~~ag 92 (329)
T 1b8p_A 83 D--ADVALLVGA 92 (329)
T ss_dssp T--CSEEEECCC
T ss_pred C--CCEEEEeCC
Confidence 5 899998754
No 373
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.50 E-value=0.067 Score=50.00 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=75.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC----------CHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR----------SLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDA 76 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~----------~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~ 76 (362)
+..+|+|.|+|+.|...+..+.+. +.+|++|.|+ +.+.+.++.++.+.-.+. .-+.++++.. ++|+
T Consensus 217 ~gk~vaVqG~GnVG~~~a~~L~~~-GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~--~~~~~e~~~~-~~DV 292 (419)
T 3aoe_E 217 RGARVVVQGLGQVGAAVALHAERL-GMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRL--DLAPEEVFGL-EAEV 292 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCC--CBCTTTGGGS-SCSE
T ss_pred cCCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCccee--eccchhhhcc-CceE
Confidence 357899999999999888888877 8999999999 888888888876621111 1133566664 7999
Q ss_pred EEEcCCC-cccHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 77 VYLPLPT-SMHVKWAISVAQKKKHLLMEK---PMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 77 V~i~~~~-~~h~~~~~~al~~gk~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
.+-|... ..+.+-+... +..+++|- |+ + .++.++ .+++|+.+..
T Consensus 293 liP~A~~n~i~~~~A~~l---~ak~V~EgAN~p~--t-~~A~~~---L~~~Gi~~~P 340 (419)
T 3aoe_E 293 LVLAAREGALDGDRARQV---QAQAVVEVANFGL--N-PEAEAY---LLGKGALVVP 340 (419)
T ss_dssp EEECSCTTCBCHHHHTTC---CCSEEEECSTTCB--C-HHHHHH---HHHHTCEEEC
T ss_pred EEecccccccccchHhhC---CceEEEECCCCcC--C-HHHHHH---HHHCCCEEEC
Confidence 9987554 3444443332 66788886 43 2 445444 4566777653
No 374
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.49 E-value=0.017 Score=51.83 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=44.8
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHHHHHHcC----CCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASR--SLEKATNFAKANN----FPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~~~~~~~----~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
|||+|+| +|++|...+..+...+...-+.++|+ ++++++..+.+.. ....+++..+-.+.++ +.|+|+++.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~--~aDvVi~~a 78 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTA--GSDVVVITA 78 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGT--TCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhC--CCCEEEEcC
Confidence 5899999 99999988877765543332447899 8776543322221 1112233222244455 499999986
Q ss_pred CCc
Q 018020 82 PTS 84 (362)
Q Consensus 82 ~~~ 84 (362)
...
T Consensus 79 g~~ 81 (303)
T 1o6z_A 79 GIP 81 (303)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 375
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.48 E-value=0.085 Score=49.55 Aligned_cols=111 Identities=17% Similarity=0.161 Sum_probs=75.5
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC----------CHHHHHHHHHHcCCC---CCCcccCCHHHHhcCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR----------SLEKATNFAKANNFP---PDAKVYGSYEALLDDKD 73 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~----------~~~~~~~~~~~~~~~---~~~~~~~~~~e~l~~~~ 73 (362)
+..||+|.|+|..|...+..|.+. +.+|++|.|+ +.+.+.++.++.+.- ++.. +-+.++++. .+
T Consensus 234 ~g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~-~i~~~ei~~-~~ 310 (440)
T 3aog_A 234 EGARVAIQGFGNVGNAAARAFHDH-GARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAE-PLPAADFWG-LP 310 (440)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSE-ECCHHHHTT-CC
T ss_pred cCCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCce-EcCchhhhc-CC
Confidence 357899999999999988888877 8999999998 788888888876521 1112 335678876 47
Q ss_pred CcEEEEcCCC-cccHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEEE
Q 018020 74 IDAVYLPLPT-SMHVKWAISVAQKKKHLLMEK---PMALNVAEFDVILNACEENGVQLMD 129 (362)
Q Consensus 74 ~D~V~i~~~~-~~h~~~~~~al~~gk~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~v 129 (362)
+|+++=|... ..+.+-+... +..+++|- |+ + .++.+++ +++|+.+..
T Consensus 311 ~DIlvPcA~~n~i~~~na~~l---~ak~VvEgAN~p~--t-~eA~~iL---~~~GI~~~P 361 (440)
T 3aog_A 311 VEFLVPAALEKQITEQNAWRI---RARIVAEGANGPT--T-PAADDIL---LEKGVLVVP 361 (440)
T ss_dssp CSEEEECSSSSCBCTTTGGGC---CCSEEECCSSSCB--C-HHHHHHH---HHHTCEEEC
T ss_pred CcEEEecCCcCccchhhHHHc---CCcEEEecCcccc--C-HHHHHHH---HHCCCEEEC
Confidence 9999987543 3343333322 56677775 43 2 4555554 466777653
No 376
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.46 E-value=0.031 Score=51.64 Aligned_cols=44 Identities=9% Similarity=-0.081 Sum_probs=36.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN 54 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~ 54 (362)
..||+|||+|.+|...++.++.. +++|+ ++|+++++++.+.+ +|
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~-v~D~~~~~l~~~~~-lG 227 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTT-GYDVRPEVAEQVRS-VG 227 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEE-EECSSGGGHHHHHH-TT
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHH-cC
Confidence 46999999999999999988887 67755 89999988777654 54
No 377
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.45 E-value=0.032 Score=53.78 Aligned_cols=87 Identities=10% Similarity=0.082 Sum_probs=59.0
Q ss_pred eeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
..||.+||.|..|.. .+..|.+. +++|. ++|.........-++.|++ ++ .+.+ .+. ++|+|+++.--.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~-G~~V~-~~D~~~~~~~~~l~~~gi~----~~~g~~~~-~~~--~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE-GYQIS-GSDLAPNSVTQHLTALGAQ----IYFHHRPE-NVL--DASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT-TCEEE-EECSSCCHHHHHHHHTTCE----EESSCCGG-GGT--TCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC-CCeEE-EEECCCCHHHHHHHHCCCE----EECCCCHH-HcC--CCCEEEECCCCC
Confidence 468999999998885 78888877 78876 5676443322223445663 33 2222 343 489999876555
Q ss_pred ccHHHHHHHHHcCCeEEEe
Q 018020 85 MHVKWAISVAQKKKHLLME 103 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~E 103 (362)
...+.+.+|.++|.+|+.|
T Consensus 93 ~~~p~~~~a~~~gi~v~~~ 111 (494)
T 4hv4_A 93 ADNPEIVAAREARIPVIRR 111 (494)
T ss_dssp TTCHHHHHHHHTTCCEEEH
T ss_pred CCCHHHHHHHHCCCCEEcH
Confidence 5666778888999999865
No 378
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.43 E-value=0.013 Score=49.83 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=60.1
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-CCCCCcccCCHHHHhcCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-FPPDAKVYGSYEALLDDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~ 85 (362)
++||.|+|+ |++|...+..|.+. +.+|+ +.+|++++...+..... +.-+..-.++++++++ ++|+|+.+.....
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~-g~~V~-~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~ 79 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR-GFEVT-AVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK--GADAVISAFNPGW 79 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT-TCEEE-EECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT--TCSEEEECCCC--
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC-CCEEE-EEEcCcccchhccCceEEEEecCCCHHHHHHHhc--CCCEEEEeCcCCC
Confidence 578999995 88999999999877 57777 45677654332211100 0001111233445565 5999998765431
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV 125 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~ 125 (362)
.. +..+..++.....+++++++.++
T Consensus 80 ~~---------------~~~~~~n~~~~~~l~~~~~~~~~ 104 (227)
T 3dhn_A 80 NN---------------PDIYDETIKVYLTIIDGVKKAGV 104 (227)
T ss_dssp -------------------CCSHHHHHHHHHHHHHHHTTC
T ss_pred CC---------------hhHHHHHHHHHHHHHHHHHHhCC
Confidence 11 11345578888999999988775
No 379
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.41 E-value=0.027 Score=50.59 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=42.1
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHH---HHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEK---ATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
.+.||+|||+|.+|...+..+....-+.-+.++|++++. +..+.. +.. +.+..+.|+ +.++ +.|+|+++.
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~-~~~-~~i~~t~d~-~~l~--~aD~Vi~aa 85 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI-FNL-PNVEISKDL-SASA--HSKVVIFTV 85 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH-HTC-TTEEEESCG-GGGT--TCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh-hcC-CCeEEeCCH-HHHC--CCCEEEEcC
Confidence 357999999999998766665433222234489998752 223332 222 234556787 4455 499999986
No 380
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=95.38 E-value=0.081 Score=48.54 Aligned_cols=131 Identities=8% Similarity=0.013 Sum_probs=75.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CC-HHH----HhcCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GS-YEA----LLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~-~~e----~l~~~~~D~V~i~~ 81 (362)
-+|.|+|+|.+|...++.++..++++++ +.++++++.+. ++++|.. .++ .+ +.+ +.....+|+|+-++
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~Ga~Vi-~~~~~~~~~~~-~~~lGa~---~vi~~~~~~~~~v~~~~~g~g~Dvvid~~ 262 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMTPATVI-ALDVKEEKLKL-AERLGAD---HVVDARRDPVKQVMELTRGRGVNVAMDFV 262 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEE-EEESSHHHHHH-HHHTTCS---EEEETTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEE-EEeCCHHHHHH-HHHhCCC---EEEeccchHHHHHHHHhCCCCCcEEEECC
Confidence 4799999999999888887766467866 45677776654 4678743 222 22 222 22223699999999
Q ss_pred CCcc--cHHHHHHHHHcCCeEEEeCCC--CCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 82 PTSM--HVKWAISVAQKKKHLLMEKPM--ALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 82 ~~~~--h~~~~~~al~~gk~V~~EKP~--~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
.... ..+.+.++ ..|+-|++--+- ..+.. .. -.+++.+. +........+..+-+++ ++|.|-.
T Consensus 263 G~~~~~~~~~~~~~-~~G~~v~~g~~~~~~~~~~------~~-~~~~~~i~-g~~~~~~~~~~~~~~l~-~~g~l~~ 329 (359)
T 1h2b_A 263 GSQATVDYTPYLLG-RMGRLIIVGYGGELRFPTI------RV-ISSEVSFE-GSLVGNYVELHELVTLA-LQGKVRV 329 (359)
T ss_dssp CCHHHHHHGGGGEE-EEEEEEECCCSSCCCCCHH------HH-HHTTCEEE-ECCSCCHHHHHHHHHHH-HTTSCCC
T ss_pred CCchHHHHHHHhhc-CCCEEEEEeCCCCCCCCHH------HH-HhCCcEEE-EecCCCHHHHHHHHHHH-HcCCCcc
Confidence 8764 44444445 556656654322 22322 11 12344443 32222223466777777 6676643
No 381
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.37 E-value=0.069 Score=48.83 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=60.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHH----hcCCCCcEEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEAL----LDDKDIDAVYL 79 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~----l~~~~~D~V~i 79 (362)
-+|.|+|+|.+|...+..++.. ++ +|++ +|+++++.+ +++++|.. .++ .++.+- .....+|+|+.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~-~~~~~~~~~-~~~~lGa~---~vi~~~~~~~~~~v~~~t~g~g~D~v~d 241 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL-GAGRIFA-VGSRKHCCD-IALEYGAT---DIINYKNGDIVEQILKATDGKGVDKVVI 241 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCSSEEE-ECCCHHHHH-HHHHHTCC---EEECGGGSCHHHHHHHHTTTCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCcEEEE-ECCCHHHHH-HHHHhCCc---eEEcCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 4689999999999888888766 66 5664 678877654 56777753 222 233332 22346999999
Q ss_pred cCCCcccHHHHHHHHHcC-CeEEE
Q 018020 80 PLPTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~g-k~V~~ 102 (362)
++......+.+.++++.| +-|++
T Consensus 242 ~~g~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 242 AGGDVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred CCCChHHHHHHHHHHhcCCEEEEe
Confidence 999877788888888776 33433
No 382
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.32 E-value=0.00089 Score=60.11 Aligned_cols=81 Identities=10% Similarity=0.118 Sum_probs=48.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCcccH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHV 87 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~~h~ 87 (362)
+|||+|||+|.||..++..|.+. +.+|. +++|+++..+. ....|..+ ..+..+..+.+. .++|+|++++|+....
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~-g~~V~-~~~r~~~~~~~-~~~~g~~~-~~~~~~~~~~~~-~~~D~vilavk~~~~~ 76 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS-LPHTT-LIGRHAKTITY-YTVPHAPA-QDIVVKGYEDVT-NTFDVIIIAVKTHQLD 76 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH-CTTCE-EEESSCEEEEE-ESSTTSCC-EEEEEEEGGGCC-SCEEEEEECSCGGGHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC-CCeEE-EEEeccCcEEE-EecCCeec-cceecCchHhcC-CCCCEEEEeCCccCHH
Confidence 37899999999999988888755 34444 55676543221 11122111 122233334331 3589999999998766
Q ss_pred HHHHHH
Q 018020 88 KWAISV 93 (362)
Q Consensus 88 ~~~~~a 93 (362)
+.+...
T Consensus 77 ~~l~~l 82 (294)
T 3g17_A 77 AVIPHL 82 (294)
T ss_dssp HHGGGH
T ss_pred HHHHHH
Confidence 555443
No 383
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.31 E-value=0.08 Score=44.42 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=57.1
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHH----HHhcCCCCcEEEEcCCC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYE----ALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~----e~l~~~~~D~V~i~~~~ 83 (362)
|||.|+|+ |++|...+..|.+. +.+|++ ++|++++...+. -++. .+.-|+. +.+. ++|+|+.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~~--~~~~---~~~~D~~d~~~~~~~--~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR-GHEVTA-IVRNAGKITQTH--KDIN---ILQKDIFDLTLSDLS--DQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEE-EESCSHHHHHHC--SSSE---EEECCGGGCCHHHHT--TCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC-CCEEEE-EEcCchhhhhcc--CCCe---EEeccccChhhhhhc--CCCEEEECCcC
Confidence 57999995 99999999999877 688775 567776665543 2221 1112221 4454 59999987665
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
... ....+....+.+++++++.+
T Consensus 72 ~~~------------------~~~~~~~~~~~l~~a~~~~~ 94 (221)
T 3ew7_A 72 SPD------------------EAEKHVTSLDHLISVLNGTV 94 (221)
T ss_dssp STT------------------TTTSHHHHHHHHHHHHCSCC
T ss_pred Ccc------------------ccchHHHHHHHHHHHHHhcC
Confidence 321 23446677777777777664
No 384
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.29 E-value=0.093 Score=47.78 Aligned_cols=132 Identities=12% Similarity=0.021 Sum_probs=78.8
Q ss_pred eEEEEEeccHHHHHHHHHHhcC-CCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCH------HHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLA-PNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSY------EALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~-~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~------~e~l~~~~~D~V~i~~ 81 (362)
-+|.|+|+|.+|...++.++.. |+++++ +.++++++.+. ++++|.. .+++.- +++.+...+|+|+.++
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi-~~~~~~~~~~~-~~~lGa~---~vi~~~~~~~~~~~~~~g~g~D~vid~~ 246 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIV-GISRSKKHRDF-ALELGAD---YVSEMKDAESLINKLTDGLGASIAIDLV 246 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEE-EECSCHHHHHH-HHHHTCS---EEECHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEE-EEeCCHHHHHH-HHHhCCC---EEeccccchHHHHHhhcCCCccEEEECC
Confidence 4799999999999887777654 367855 56677776654 4567742 222211 1222223699999999
Q ss_pred CCcccHHHHHHHHHcC-CeEEEe---CCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 82 PTSMHVKWAISVAQKK-KHLLME---KPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~E---KP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
......+.+..+++.| +-|++- .++..+... + -.+++.+. +........+.++-+++ ++|.|-.
T Consensus 247 g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~-~~~~~~i~-g~~~~~~~~~~~~~~l~-~~g~i~~ 314 (344)
T 2h6e_A 247 GTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFD------T-AVWNKKLL-GSNYGSLNDLEDVVRLS-ESGKIKP 314 (344)
T ss_dssp CCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHH------H-HHTTCEEE-ECCSCCHHHHHHHHHHH-HTTSSCC
T ss_pred CChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHH------H-hhCCcEEE-EEecCCHHHHHHHHHHH-HcCCCCc
Confidence 8876677777777765 444433 233334322 1 12344443 33222234567777888 6777743
No 385
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.29 E-value=0.073 Score=48.00 Aligned_cols=131 Identities=11% Similarity=0.060 Sum_probs=76.6
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCC---HHHHhcCCCCcEEEEcCCCc
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGS---YEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~e~l~~~~~D~V~i~~~~~ 84 (362)
-+|.|+| +|.+|...+..++.. ++++++++ +.++ .++++++|... +.-+.+ +.+.+ ..+|+|+-++...
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~--~~~~-~~~~~~lGa~~-~i~~~~~~~~~~~~--~g~D~v~d~~g~~ 226 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA--SKRN-HAFLKALGAEQ-CINYHEEDFLLAIS--TPVDAVIDLVGGD 226 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE--CHHH-HHHHHHHTCSE-EEETTTSCHHHHCC--SCEEEEEESSCHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe--ccch-HHHHHHcCCCE-EEeCCCcchhhhhc--cCCCEEEECCCcH
Confidence 4688997 899999888888877 67888776 3444 55677888531 111222 33434 3699999998865
Q ss_pred ccHHHHHHHHHcCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 85 MHVKWAISVAQKKKH-LLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 85 ~h~~~~~~al~~gk~-V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
.- ..+.++++.|-. |.+- ..+... +.......++.+.-.........+..+-+++ ++|.|-.
T Consensus 227 ~~-~~~~~~l~~~G~iv~~g---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~l~~ 289 (321)
T 3tqh_A 227 VG-IQSIDCLKETGCIVSVP---TITAGR---VIEVAKQKHRRAFGLLKQFNIEELHYLGKLV-SEDKLRI 289 (321)
T ss_dssp HH-HHHGGGEEEEEEEEECC---STTHHH---HHHHHHHTTCEEECCCCCCCHHHHHHHHHHH-HTTSSCC
T ss_pred HH-HHHHHhccCCCEEEEeC---CCCchh---hhhhhhhcceEEEEEecCCCHHHHHHHHHHH-HCCCccc
Confidence 54 556666666533 3331 112211 2333445566554212222234566777777 6777644
No 386
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.26 E-value=0.036 Score=51.55 Aligned_cols=45 Identities=9% Similarity=-0.033 Sum_probs=36.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF 55 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~ 55 (362)
..+|+|||+|.+|...+..++.. +++ |-++|+++++++.+.+ +|.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~-V~~~d~~~~~~~~~~~-~Ga 216 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL-GAV-VMATDVRAATKEQVES-LGG 216 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCE-EEEECSCSTTHHHHHH-TTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHHHH-cCC
Confidence 56899999999999999998888 577 5689998877766544 763
No 387
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=95.25 E-value=0.042 Score=47.11 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=57.9
Q ss_pred ceeEEEEE--eccHHHHHHHHHHhcCC-CcEEEEEEcC-CHHHHHHHHHHcCCCCC---CcccCC-------HHHHhcCC
Q 018020 7 AAIRFGII--GAADIARKLSRAITLAP-NAVLSAVASR-SLEKATNFAKANNFPPD---AKVYGS-------YEALLDDK 72 (362)
Q Consensus 7 ~~~~v~ii--G~G~~g~~~~~~~~~~~-~~~vv~v~d~-~~~~~~~~~~~~~~~~~---~~~~~~-------~~e~l~~~ 72 (362)
+++||+++ |.|..+...+..+.+.. +++|++|+.. ........|+++|+|-- ..-+.+ +.+.|+..
T Consensus 21 ~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~ 100 (229)
T 3auf_A 21 HMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQAY 100 (229)
T ss_dssp TCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccHHHHHHHHhc
Confidence 46899999 88887777888776543 5788888754 33446678999999710 011121 22345556
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcC
Q 018020 73 DIDAVYLPLPTSMHVKWAISVAQKK 97 (362)
Q Consensus 73 ~~D~V~i~~~~~~h~~~~~~al~~g 97 (362)
++|+++++.-..--.+-+....+.|
T Consensus 101 ~~Dliv~agy~~IL~~~~l~~~~~~ 125 (229)
T 3auf_A 101 GVDLVCLAGYMRLVRGPMLTAFPNR 125 (229)
T ss_dssp TCSEEEESSCCSCCCHHHHHHSTTC
T ss_pred CCCEEEEcChhHhCCHHHHhhccCC
Confidence 8999999876554444444444433
No 388
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.24 E-value=0.038 Score=54.00 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=28.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL 43 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~ 43 (362)
..||.|||+|..|...+..|... ++.-+.++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCC
Confidence 56899999999999999999877 555566888753
No 389
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.24 E-value=0.2 Score=45.87 Aligned_cols=130 Identities=9% Similarity=-0.040 Sum_probs=79.3
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc-------CCHHH-H---hcCCCCcEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY-------GSYEA-L---LDDKDIDAV 77 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~e-~---l~~~~~D~V 77 (362)
-+|.|+|+|.+|...++.++.. +++.|.+.++++++.+.+. ++. . .+..| .++.+ + .....+|+|
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~-~l~-~-~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAK-EIC-P-EVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHH-HHC-T-TCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH-Hhc-h-hcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 3689999999999888888876 6763445678888776554 443 1 11112 12222 2 223479999
Q ss_pred EEcCCCcccHHHHHHHHHcCCeE-EEe---CCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCc
Q 018020 78 YLPLPTSMHVKWAISVAQKKKHL-LME---KPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~gk~V-~~E---KP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~i 152 (362)
+.++........+.++++.|-.+ ++- .+...+... .-.+++.+.-.+ ++...+..+-+++ ++|.+
T Consensus 257 id~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-------~~~~~~~i~g~~--~~~~~~~~~~~l~-~~g~i 325 (363)
T 3m6i_A 257 LECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMR-------ASVREVDLQFQY--RYCNTWPRAIRLV-ENGLV 325 (363)
T ss_dssp EECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHH-------HHHHTCEEEECC--SCSSCHHHHHHHH-HTTSS
T ss_pred EECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHH-------HHhcCcEEEEcc--CCHHHHHHHHHHH-HhCCC
Confidence 99999887788888888777544 432 233334321 122334443222 3355677888888 77776
No 390
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.23 E-value=0.032 Score=54.45 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=27.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS 42 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~ 42 (362)
..||.|||+|..|...+..|... ++.=+.++|.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCC
Confidence 46899999999999999999877 56555678764
No 391
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.19 E-value=0.055 Score=50.06 Aligned_cols=91 Identities=12% Similarity=0.087 Sum_probs=61.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhc---CCCCcEEEEc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLD---DKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~---~~~~D~V~i~ 80 (362)
-+|.|+|+|.+|...+..++.. ++ +|+ ++|+++++.+ +++++|... +.-+ .++.+.+. ...+|+|+.+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi-~~~~~~~~~~-~a~~lGa~~-vi~~~~~~~~~~~~i~~~~~gg~D~vid~ 270 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTA-GASRII-GIDIDSKKYE-TAKKFGVNE-FVNPKDHDKPIQEVIVDLTDGGVDYSFEC 270 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCSCEE-EECSCTTHHH-HHHTTTCCE-EECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEE-EEcCCHHHHH-HHHHcCCcE-EEccccCchhHHHHHHHhcCCCCCEEEEC
Confidence 4689999999999888888766 56 566 4567777665 667887531 1111 23333221 1279999999
Q ss_pred CCCcccHHHHHHHHHc--CCeEEEe
Q 018020 81 LPTSMHVKWAISVAQK--KKHLLME 103 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~--gk~V~~E 103 (362)
+......+.+..+++. |+-|++-
T Consensus 271 ~g~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 271 IGNVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCHHHHHHHHHHhhccCCEEEEEc
Confidence 9987777888888876 4445543
No 392
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.19 E-value=0.071 Score=48.08 Aligned_cols=72 Identities=17% Similarity=0.176 Sum_probs=45.8
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC-C-CC-CCcc---cCCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN-F-PP-DAKV---YGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~-~-~~-~~~~---~~~~~e~l~~~~~D~V~i~~ 81 (362)
|||+|||+ |++|...+..|...+-..-+.++|+++ ++..+.++. . .+ .... .+|+++.+++ .|+|+++.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~--aDvVvi~a 76 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKG--CDVVVIPA 76 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTT--CSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCC--CCEEEECC
Confidence 58999998 999998888877554333355889876 222223321 1 11 1122 1478888875 99999986
Q ss_pred CCc
Q 018020 82 PTS 84 (362)
Q Consensus 82 ~~~ 84 (362)
...
T Consensus 77 g~~ 79 (314)
T 1mld_A 77 GVP 79 (314)
T ss_dssp SCC
T ss_pred CcC
Confidence 543
No 393
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.17 E-value=0.047 Score=50.86 Aligned_cols=45 Identities=16% Similarity=0.064 Sum_probs=36.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF 55 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~ 55 (362)
+.||+|||+|.+|...+..++.. +++|+ ++|+++++.+.+.+ +|.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~-v~D~~~~~l~~~~~-~G~ 234 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVS-ATDVRPAAKEQVAS-LGA 234 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSSTTHHHHHHH-TTC
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEE-EEcCCHHHHHHHHH-cCC
Confidence 57999999999999999999888 67755 89999988776654 553
No 394
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.12 E-value=0.22 Score=45.15 Aligned_cols=131 Identities=11% Similarity=0.122 Sum_probs=76.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhcC--CCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLDD--KDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~~--~~~D~V~i~~~ 82 (362)
-+|.|+|+|.+|...+..++.. +++++ +.++++++.+.+ +++|.. .++ .++.+.+.. ..+|+|+.++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi-~~~~~~~~~~~~-~~lGa~---~~~d~~~~~~~~~~~~~~~~~d~vid~~g 239 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAM-GLNVV-AVDIGDEKLELA-KELGAD---LVVNPLKEDAAKFMKEKVGGVHAAVVTAV 239 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEE-EECSCHHHHHHH-HHTTCS---EEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEE-EEeCCHHHHHHH-HHCCCC---EEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence 4799999999999888888877 67766 566787776654 567742 121 233332211 36999999998
Q ss_pred CcccHHHHHHHHHcC-CeEEEeCC---CCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 83 TSMHVKWAISVAQKK-KHLLMEKP---MALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 83 ~~~h~~~~~~al~~g-k~V~~EKP---~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
.....+.+..+++.| +-|++--+ +..+... + -.+++.+. +........+..+-+++ ++|.+-.
T Consensus 240 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~~~~i~-g~~~~~~~~~~~~~~l~-~~g~l~~ 306 (339)
T 1rjw_A 240 SKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFD---T----VLNGIKII-GSIVGTRKDLQEALQFA-AEGKVKT 306 (339)
T ss_dssp CHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHH---H----HHTTCEEE-ECCSCCHHHHHHHHHHH-HTTSCCC
T ss_pred CHHHHHHHHHHhhcCCEEEEecccCCCCccCHHH---H----HhCCcEEE-EeccCCHHHHHHHHHHH-HcCCCCc
Confidence 766666667777665 44444222 1112211 1 12344443 32222223466777777 6666643
No 395
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.08 E-value=0.043 Score=51.35 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=35.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN 54 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~ 54 (362)
..+|+|||+|.+|...+..++.. +++ |.++|+++++++.+ +++|
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~-V~v~D~~~~~~~~~-~~lG 215 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-GAI-VRAFDTRPEVKEQV-QSMG 215 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCE-EEEECSCGGGHHHH-HHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCE-EEEEcCCHHHHHHH-HHcC
Confidence 46899999999999999999888 576 55899998877765 5566
No 396
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.08 E-value=0.018 Score=47.96 Aligned_cols=97 Identities=16% Similarity=0.122 Sum_probs=59.4
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---CCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---PDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
.++|.|+|+ |.+|...++.|.+. +.+|++ .+|++++..... ..++. -+..-.++++++++ ++|+|+.+...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~-g~~V~~-~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQA-GYEVTV-LVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEE-EESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEE-EEeChhhccccc-CCceEEEEecCCCHHHHHHHHc--CCCEEEECccC
Confidence 378999998 99999999999877 578775 457655432110 00110 00011123445555 48999987664
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV 125 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~ 125 (362)
... +.|...+......+++++++.++
T Consensus 78 ~~~----------------~~~~~~n~~~~~~~~~~~~~~~~ 103 (206)
T 1hdo_A 78 RND----------------LSPTTVMSEGARNIVAAMKAHGV 103 (206)
T ss_dssp TTC----------------CSCCCHHHHHHHHHHHHHHHHTC
T ss_pred CCC----------------CCccchHHHHHHHHHHHHHHhCC
Confidence 322 23444567778888888887765
No 397
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.02 E-value=0.28 Score=44.79 Aligned_cols=130 Identities=10% Similarity=-0.018 Sum_probs=78.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCcccC--CHH----HHhc--CCCCcEEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVYG--SYE----ALLD--DKDIDAVYL 79 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~----e~l~--~~~~D~V~i 79 (362)
-+|.|+|+|.+|...++.++.. ++ +|+ +.++++++.+ +++++|.. .+.-+. +.+ ++.+ ...+|+|+.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi-~~~~~~~~~~-~a~~lGa~-~vi~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAM-GAAQVV-VTDLSATRLS-KAKEIGAD-LVLQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEE-EEESCHHHHH-HHHHTTCS-EEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEE-EECCCHHHHH-HHHHhCCC-EEEcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 4799999999999888888776 66 666 4567777655 45678753 111122 112 2221 146999999
Q ss_pred cCCCcccHHHHHHHHHcCCeE-EEe---CCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCc
Q 018020 80 PLPTSMHVKWAISVAQKKKHL-LME---KPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~gk~V-~~E---KP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~i 152 (362)
++......+.+.++++.|-.+ ++- .+...+... .-.+++.+.-. +++...+..+.+++ ++|.+
T Consensus 249 ~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-------~~~~~~~i~g~--~~~~~~~~~~~~l~-~~g~i 315 (356)
T 1pl8_A 249 CTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLH-------AAIREVDIKGV--FRYCNTWPVAISML-ASKSV 315 (356)
T ss_dssp CSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHH-------HHHTTCEEEEC--CSCSSCHHHHHHHH-HTTSC
T ss_pred CCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHH-------HHhcceEEEEe--cccHHHHHHHHHHH-HcCCC
Confidence 998876677777888776443 332 233344321 12334544322 23345677888888 66764
No 398
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.01 E-value=0.042 Score=50.51 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=54.0
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC-----CHHHHhcCCCCcEEEEcCCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG-----SYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~e~l~~~~~D~V~i~~~~ 83 (362)
-+|.|+|+|.+|...+..++.. ++++++ .++++++.+. ++++|.. .+++ ++.+-+. ..+|+|+.++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~-~~~~~~~~~~-~~~lGa~---~v~~~~~~~~~~~~~~-~~~D~vid~~g~ 253 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM-GAETYV-ISRSSRKRED-AMKMGAD---HYIATLEEGDWGEKYF-DTFDLIVVCASS 253 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEE-EESSSTTHHH-HHHHTCS---EEEEGGGTSCHHHHSC-SCEEEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEE-EcCCHHHHHH-HHHcCCC---EEEcCcCchHHHHHhh-cCCCEEEECCCC
Confidence 4799999999999888888766 678665 4555555544 4557743 2221 3333333 379999999887
Q ss_pred --cccHHHHHHHHHcC
Q 018020 84 --SMHVKWAISVAQKK 97 (362)
Q Consensus 84 --~~h~~~~~~al~~g 97 (362)
....+.+..+++.|
T Consensus 254 ~~~~~~~~~~~~l~~~ 269 (360)
T 1piw_A 254 LTDIDFNIMPKAMKVG 269 (360)
T ss_dssp STTCCTTTGGGGEEEE
T ss_pred CcHHHHHHHHHHhcCC
Confidence 55555566666654
No 399
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.00 E-value=0.14 Score=48.41 Aligned_cols=117 Identities=10% Similarity=0.067 Sum_probs=78.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC----------CHHHHHHHHHHcC-----CC------CCCcccCCHH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR----------SLEKATNFAKANN-----FP------PDAKVYGSYE 66 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~----------~~~~~~~~~~~~~-----~~------~~~~~~~~~~ 66 (362)
-.||+|-|+|+.|...+..+.+. +.++|+|.|. +.+....+.+... +. ++.... +.+
T Consensus 252 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v-~~~ 329 (470)
T 2bma_A 252 KQTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF-PNE 329 (470)
T ss_dssp GCEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC-SSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe-cCc
Confidence 47899999999999888888877 8999999994 5555554433221 10 012222 224
Q ss_pred HHhcCCCCcEEEEc-CCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Q 018020 67 ALLDDKDIDAVYLP-LPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDG 130 (362)
Q Consensus 67 e~l~~~~~D~V~i~-~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 130 (362)
+++. .++|+.+=| +++..+.+-+...++++..+++|=-=.....+| .+..+++|+.+..+
T Consensus 330 ~~~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA---~~~L~~rGIl~~PD 390 (470)
T 2bma_A 330 KPWG-VPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDA---INLFKSNNIIYCPS 390 (470)
T ss_dssp CTTS-SCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHH---HHHHHHTTCEEECH
T ss_pred Ceee-cCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHH---HHHHHHCCcEEECh
Confidence 6664 479999864 667788888888888898999996211122333 35567788877643
No 400
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=94.99 E-value=0.039 Score=46.94 Aligned_cols=81 Identities=12% Similarity=0.188 Sum_probs=51.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCC---HHHHhcCCCCcEEEEcCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGS---YEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~e~l~~~~~D~V~i~~~~ 83 (362)
.+-|+.|+|+|..|+..++.+++ .++++++..|.++... .-.|+ .++.+ +.++.+. ..+.++++.++
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~-~~~~~vgfiDd~~~~~----~~~g~----~Vlg~~~~~~~~~~~-~~~~v~iAIg~ 80 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRA-CGETVAAIVDADPTRR----AVLGV----PVVGDDLALPMLREQ-GLSRLFVAIGD 80 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECSCC-------CBTTB----CEEESGGGHHHHHHT-TCCEEEECCCC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHh-CCCEEEEEEeCCcccC----cCCCe----eEECCHHHHHHhhcc-cccEEEEecCC
Confidence 34579999999999999999887 5799999999876431 12344 35443 4444443 46777888776
Q ss_pred c-ccHHHHHHHHHcC
Q 018020 84 S-MHVKWAISVAQKK 97 (362)
Q Consensus 84 ~-~h~~~~~~al~~g 97 (362)
. .+.++...+.+.|
T Consensus 81 ~~~R~~i~~~l~~~g 95 (220)
T 4ea9_A 81 NRLRQKLGRKARDHG 95 (220)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 3 2333444444444
No 401
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.98 E-value=0.094 Score=48.97 Aligned_cols=128 Identities=9% Similarity=0.032 Sum_probs=77.8
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHH----HhcCCCCcEEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEA----LLDDKDIDAVYL 79 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e----~l~~~~~D~V~i 79 (362)
-+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+ +++++|.. .++ .++.+ +.....+|+|+-
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi-~~~~~~~~~~-~~~~lGa~---~vi~~~~~~~~~~i~~~t~g~g~D~vid 288 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHA-GASKVI-LSEPSEVRRN-LAKELGAD---HVIDPTKENFVEAVLDYTNGLGAKLFLE 288 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEE-EECSCHHHHH-HHHHHTCS---EEECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEE-EECCCHHHHH-HHHHcCCC---EEEcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence 4799999999999888888877 66 666 5677777665 55677743 222 23333 223347999999
Q ss_pred cCCCc-ccHHHHHHHH----HcC-CeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCC
Q 018020 80 PLPTS-MHVKWAISVA----QKK-KHLLMEK---PMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQ 150 (362)
Q Consensus 80 ~~~~~-~h~~~~~~al----~~g-k~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g 150 (362)
++... ...+.+..++ +.| +-|++-. +...+... ....++.+.-.........+..+-+++ ++|
T Consensus 289 ~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~-------~~~~~~~i~g~~~~~~~~~~~~~~~ll-~~g 360 (404)
T 3ip1_A 289 ATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEV-------FQVRRAQIVGSQGHSGHGTFPRVISLM-ASG 360 (404)
T ss_dssp CSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHH-------HHHTTCEEEECCCCCSTTHHHHHHHHH-HTT
T ss_pred CCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHH-------HhccceEEEEecCCCchHHHHHHHHHH-HcC
Confidence 99887 4566677777 665 4444432 22223222 123445554333222244677888888 666
No 402
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=94.95 E-value=0.29 Score=37.45 Aligned_cols=117 Identities=9% Similarity=0.070 Sum_probs=62.7
Q ss_pred CCccCCceeEEEEEeccHHHHHH-HHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc------CC----HHHHh
Q 018020 1 MATESQAAIRFGIIGAADIARKL-SRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY------GS----YEALL 69 (362)
Q Consensus 1 m~~~~~~~~~v~iiG~G~~g~~~-~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~------~~----~~e~l 69 (362)
|++.++++++|.||.-...-... ...+....+++++..++...+..+.+ ++.. ++..+. .+ ++.+-
T Consensus 1 M~~~~~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l-~~~~--~dlii~d~~l~~~~g~~~~~~l~ 77 (143)
T 3cnb_A 1 MSLNVKNDFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLL-HTVK--PDVVMLDLMMVGMDGFSICHRIK 77 (143)
T ss_dssp --------CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHH-HHTC--CSEEEEETTCTTSCHHHHHHHHH
T ss_pred CcccccCCceEEEEECCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHH-HhcC--CCEEEEecccCCCcHHHHHHHHH
Confidence 66666778999999988755444 44455425788565665444444444 3322 111111 12 22232
Q ss_pred c---CCCCcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 70 D---DKDIDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 70 ~---~~~~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
+ .+.+-+|+++... .......++++|..-++.||+ +.++..+.++.+-+..
T Consensus 78 ~~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~kP~--~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 78 STPATANIIVIAMTGAL--TDDNVSRIVALGAETCFGKPL--NFTLLEKTIKQLVEQK 131 (143)
T ss_dssp TSTTTTTSEEEEEESSC--CHHHHHHHHHTTCSEEEESSC--CHHHHHHHHHHHHHTT
T ss_pred hCccccCCcEEEEeCCC--CHHHHHHHHhcCCcEEEeCCC--CHHHHHHHHHHHHHhh
Confidence 3 1334455554443 356678899999988999995 6777777666665543
No 403
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.92 E-value=0.063 Score=47.20 Aligned_cols=70 Identities=14% Similarity=0.086 Sum_probs=46.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
++||.|+|+|++|...+..|.+. +.+|+++ +|++++...+.. .++. .+..|+.++ +..++|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~-~~~~---~~~~D~~d~-~~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ-GWRIIGT-SRNPDQMEAIRA-SGAE---PLLWPGEEP-SLDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG-TCEEEEE-ESCGGGHHHHHH-TTEE---EEESSSSCC-CCTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHC-CCEEEEE-EcChhhhhhHhh-CCCe---EEEeccccc-ccCCCCEEEECCCcc
Confidence 47899999999999999999877 6887765 577666655543 2321 122233332 144699999876654
No 404
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=94.91 E-value=0.29 Score=44.01 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=49.5
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC--CCCc-ccCCHHHHhc---CCCCcEEEEc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP--PDAK-VYGSYEALLD---DKDIDAVYLP 80 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~--~~~~-~~~~~~e~l~---~~~~D~V~i~ 80 (362)
++++|.+||+|. |......++..|+.+++ ++|.+++-.+...+.++.+ +.+. ...|..+.+. ....|+|++-
T Consensus 89 ~~~rVLdIG~G~-G~la~~la~~~p~~~v~-~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 89 SKLRITHLGGGA-CTMARYFADVYPQSRNT-VVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp GGCEEEEESCGG-GHHHHHHHHHSTTCEEE-EEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CCCEEEEEECCc-CHHHHHHHHHCCCcEEE-EEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 357999999997 43333344447888866 6899998777666666543 1222 3578888764 3468999985
Q ss_pred CC
Q 018020 81 LP 82 (362)
Q Consensus 81 ~~ 82 (362)
..
T Consensus 167 ~~ 168 (317)
T 3gjy_A 167 VF 168 (317)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 405
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.87 E-value=0.19 Score=46.25 Aligned_cols=88 Identities=11% Similarity=0.120 Sum_probs=57.3
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcC-CCCcEEEEcCCCcccH
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDD-KDIDAVYLPLPTSMHV 87 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~-~~~D~V~i~~~~~~h~ 87 (362)
-+|.|+|+|.+|...++.++.. +++++ +.++++++.+. ++++|.. .+.-+.+.+.+-+- ..+|+|+.++......
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi-~~~~~~~~~~~-a~~lGa~-~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~ 271 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVV-AFTTSEAKREA-AKALGAD-EVVNSRNADEMAAHLKSFDFILNTVAAPHNL 271 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESSGGGHHH-HHHHTCS-EEEETTCHHHHHTTTTCEEEEEECCSSCCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHH-HHHcCCc-EEeccccHHHHHHhhcCCCEEEECCCCHHHH
Confidence 4789999999999888888776 77865 45567666654 4567743 11113332211111 4699999999887667
Q ss_pred HHHHHHHHcCCeE
Q 018020 88 KWAISVAQKKKHL 100 (362)
Q Consensus 88 ~~~~~al~~gk~V 100 (362)
+.+..+++.|-.+
T Consensus 272 ~~~~~~l~~~G~i 284 (369)
T 1uuf_A 272 DDFTTLLKRDGTM 284 (369)
T ss_dssp HHHHTTEEEEEEE
T ss_pred HHHHHHhccCCEE
Confidence 7777777665333
No 406
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=94.85 E-value=0.0024 Score=58.29 Aligned_cols=85 Identities=16% Similarity=0.171 Sum_probs=55.9
Q ss_pred eEEEEEe-ccHHHHHHHHHHh--cCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC-CHHHHhcCCCCcEEEEcCCCc
Q 018020 9 IRFGIIG-AADIARKLSRAIT--LAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG-SYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~--~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|||+|+| +|.+|+..++.+. .+|..+++.+.++... -+.+. ++- ....+.+ +.++ + ++|+|+.|+|..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~-g~~l~--~~g-~~i~v~~~~~~~-~---~~DvV~~a~g~~ 72 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSA-GVRLA--FRG-EEIPVEPLPEGP-L---PVDLVLASAGGG 72 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGS-SCEEE--ETT-EEEEEEECCSSC-C---CCSEEEECSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccC-CCEEE--EcC-ceEEEEeCChhh-c---CCCEEEECCCcc
Confidence 5799999 8999999999887 7787777655543110 00000 000 0011211 2222 2 699999999999
Q ss_pred ccHHHHHHHHHcCCeEE
Q 018020 85 MHVKWAISVAQKKKHLL 101 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~ 101 (362)
...+.+...+++|..|+
T Consensus 73 ~s~~~a~~~~~~G~~vI 89 (331)
T 2yv3_A 73 ISRAKALVWAEGGALVV 89 (331)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred chHHHHHHHHHCCCEEE
Confidence 99999999999997544
No 407
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.82 E-value=0.12 Score=46.74 Aligned_cols=88 Identities=16% Similarity=0.123 Sum_probs=58.1
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhc---CCCCcEEEEc
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLD---DKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~---~~~~D~V~i~ 80 (362)
-+|.|+|+ |.+|...++.++.. ++++++ .++++++.+.+++++|.. .++ .++.+.+. ...+|+|+.+
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLK-GCRVVG-IAGGAEKCRFLVEELGFD---GAIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT-TCEEEE-EESSHHHHHHHHHTTCCS---EEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEE-EeCCHHHHHHHHHHcCCC---EEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 47899998 99999888888876 678775 567888888776788753 111 23333221 2369999998
Q ss_pred CCCcccHHHHHHHHHcC-CeEEE
Q 018020 81 LPTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~g-k~V~~ 102 (362)
+.. .....+..+++.| +-|++
T Consensus 226 ~g~-~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 226 VGG-EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp SCH-HHHHHHHTTEEEEEEEEEC
T ss_pred CCc-chHHHHHHHHhhCCEEEEE
Confidence 875 3455555666555 33443
No 408
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.81 E-value=0.16 Score=46.31 Aligned_cols=86 Identities=16% Similarity=0.101 Sum_probs=58.5
Q ss_pred eEEEEE-eccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHh---cCCCCcEEEEcC
Q 018020 9 IRFGII-GAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALL---DDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~ii-G~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l---~~~~~D~V~i~~ 81 (362)
-+|.|+ |+|.+|...+..++.. ++++++ .++++++.+.+ +++|.. .++ +++.+.+ ....+|+|+.++
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~-~~~~~~~~~~~-~~lGa~---~vi~~~~~~~~~~~~~~~~g~Dvv~d~~ 225 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAY-GLRVIT-TASRNETIEWT-KKMGAD---IVLNHKESLLNQFKTQGIELVDYVFCTF 225 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEE-ECCSHHHHHHH-HHHTCS---EEECTTSCHHHHHHHHTCCCEEEEEESS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc-CCEEEE-EeCCHHHHHHH-HhcCCc---EEEECCccHHHHHHHhCCCCccEEEECC
Confidence 468999 6899999888888866 678775 46777766554 557643 121 2333322 224699999999
Q ss_pred CCcccHHHHHHHHHcCCeE
Q 018020 82 PTSMHVKWAISVAQKKKHL 100 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk~V 100 (362)
......+.+..+++.|-.+
T Consensus 226 g~~~~~~~~~~~l~~~G~i 244 (346)
T 3fbg_A 226 NTDMYYDDMIQLVKPRGHI 244 (346)
T ss_dssp CHHHHHHHHHHHEEEEEEE
T ss_pred CchHHHHHHHHHhccCCEE
Confidence 8877777788888776444
No 409
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.78 E-value=0.05 Score=46.48 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=62.3
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCC-CC-CCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNF-PP-DAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~-~~-~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
+.++|.|.|+ |++|...+..|.+. +.+|+ +++|++++.+.+... ++ .. ...+.+++.+.+. ++|+|+.+...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~-G~~V~-~~~R~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~--~~D~vi~~ag~ 94 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK-GHEPV-AMVRNEEQGPELRER-GASDIVVANLEEDFSHAFA--SIDAVVFAAGS 94 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-TCEEE-EEESSGGGHHHHHHT-TCSEEEECCTTSCCGGGGT--TCSEEEECCCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC-CCeEE-EEECChHHHHHHHhC-CCceEEEcccHHHHHHHHc--CCCEEEECCCC
Confidence 4679999997 89999999999876 67877 456887777766542 32 10 0011155566665 59999987654
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV 125 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~ 125 (362)
..... .++-+..++.....+++++++.++
T Consensus 95 ~~~~~-------------~~~~~~~n~~~~~~l~~a~~~~~~ 123 (236)
T 3e8x_A 95 GPHTG-------------ADKTILIDLWGAIKTIQEAEKRGI 123 (236)
T ss_dssp CTTSC-------------HHHHHHTTTHHHHHHHHHHHHHTC
T ss_pred CCCCC-------------ccccchhhHHHHHHHHHHHHHcCC
Confidence 32100 011223455666777777766653
No 410
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=94.74 E-value=0.055 Score=45.93 Aligned_cols=77 Identities=22% Similarity=0.242 Sum_probs=50.3
Q ss_pred eEEEEE--eccHHHHHHHHHHhcCC-CcEEEEEEcC-CHHHHHHHHHHcCCCCC---CcccCC-------HHHHhcCCCC
Q 018020 9 IRFGII--GAADIARKLSRAITLAP-NAVLSAVASR-SLEKATNFAKANNFPPD---AKVYGS-------YEALLDDKDI 74 (362)
Q Consensus 9 ~~v~ii--G~G~~g~~~~~~~~~~~-~~~vv~v~d~-~~~~~~~~~~~~~~~~~---~~~~~~-------~~e~l~~~~~ 74 (362)
+||+++ |.|..+...+..+.+.. .+++++|+.. ........|+++|+|-- ..-+.+ +.+.|+..++
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~ 81 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKGV 81 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcCC
Confidence 689999 88888878888877543 2588887754 33456778999999710 011111 2234555689
Q ss_pred cEEEEcCCCcc
Q 018020 75 DAVYLPLPTSM 85 (362)
Q Consensus 75 D~V~i~~~~~~ 85 (362)
|+++++.-..-
T Consensus 82 Dliv~a~y~~i 92 (216)
T 2ywr_A 82 ELVVLAGFMRI 92 (216)
T ss_dssp CEEEESSCCSC
T ss_pred CEEEEeCchhh
Confidence 99998866443
No 411
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=94.73 E-value=0.052 Score=48.94 Aligned_cols=71 Identities=21% Similarity=0.277 Sum_probs=43.5
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcC--CHHHHHH----HHHHcC-CCCCCcccC---CHHHHhcCCCCcEE
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASR--SLEKATN----FAKANN-FPPDAKVYG---SYEALLDDKDIDAV 77 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~--~~~~~~~----~~~~~~-~~~~~~~~~---~~~e~l~~~~~D~V 77 (362)
|||+|+|+ |++|...+..+...+.+.-+.++|+ ++++++. +.+-.- ....+.+.. ++.+.+++ +|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~g--aD~V 78 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDE--SDVV 78 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTT--CSEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCC--CCEE
Confidence 58999999 9999998888766543343557898 7665543 221100 101123332 24566664 9999
Q ss_pred EEcC
Q 018020 78 YLPL 81 (362)
Q Consensus 78 ~i~~ 81 (362)
+++.
T Consensus 79 i~~A 82 (313)
T 1hye_A 79 IITS 82 (313)
T ss_dssp EECC
T ss_pred EECC
Confidence 9864
No 412
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.68 E-value=0.33 Score=44.13 Aligned_cols=131 Identities=10% Similarity=0.007 Sum_probs=75.7
Q ss_pred EEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHHh----cCCCCcEEEEcCC
Q 018020 10 RFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEALL----DDKDIDAVYLPLP 82 (362)
Q Consensus 10 ~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~l----~~~~~D~V~i~~~ 82 (362)
+|.|+|+|.+|...++.++.. ++ +++ +.++++++.+. ++++|... +.-+ .++.+.+ ....+|+|+.++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi-~~~~~~~~~~~-~~~~Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKAS-GAYPVI-VSEPSDFRREL-AKKVGADY-VINPFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCSEE-EECSCHHHHHH-HHHHTCSE-EECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCCEEE-EECCCHHHHHH-HHHhCCCE-EECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 699999999999888888877 56 766 46677776654 45666420 0011 2333332 2236999999998
Q ss_pred CcccHHHHHHHHHcCCe-EEEe---CCCCCCHHHHHHHHHHHHHcCCEEEEeeeccc-ChhHHHHHHhhcCCCCc
Q 018020 83 TSMHVKWAISVAQKKKH-LLME---KPMALNVAEFDVILNACEENGVQLMDGTMWVH-NPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~-V~~E---KP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~-~p~~~~~k~~i~~~g~i 152 (362)
.....+.+..+++.|-. |.+- .+...+.. . ..-.+++.+. +...+. ...+..+.+++ ++|.+
T Consensus 246 ~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~--~----~~~~~~~~i~-g~~~~~~~~~~~~~~~l~-~~g~i 312 (348)
T 2d8a_A 246 APKALEQGLQAVTPAGRVSLLGLYPGKVTIDFN--N----LIIFKALTIY-GITGRHLWETWYTVSRLL-QSGKL 312 (348)
T ss_dssp CHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHH--H----HTTTTTCEEE-ECCCCCSHHHHHHHHHHH-HHTCC
T ss_pred CHHHHHHHHHHHhcCCEEEEEccCCCCcccCch--H----HHHhCCcEEE-EecCCCcHHHHHHHHHHH-HcCCC
Confidence 76666777777766533 3332 22223320 0 1112344433 332222 34566777777 56653
No 413
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.67 E-value=0.67 Score=38.65 Aligned_cols=114 Identities=14% Similarity=0.172 Sum_probs=70.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH---HcCCCCCCc-ccCCHHHH---hcCCCCcEEEEc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK---ANNFPPDAK-VYGSYEAL---LDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~---~~~~~~~~~-~~~~~~e~---l~~~~~D~V~i~ 80 (362)
.-+|.=||||. |.......+..|+.+++ .+|.+++..+...+ ..+++ ++. +..|..++ +....+|+|++.
T Consensus 42 ~~~vLDiGcG~-G~~~~~la~~~p~~~v~-gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 42 NPIHVEVGSGK-GAFVSGMAKQNPDINYI-GIDIQKSVLSYALDKVLEVGVP-NIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CCEEEEESCTT-SHHHHHHHHHCTTSEEE-EEESCHHHHHHHHHHHHHHCCS-SEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCeEEEEccCc-CHHHHHHHHHCCCCCEE-EEEcCHHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 45788999996 65555556667888877 46888876554433 23432 112 23444443 445579999987
Q ss_pred CCCcc--------------cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Q 018020 81 LPTSM--------------HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQL 127 (362)
Q Consensus 81 ~~~~~--------------h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~ 127 (362)
-|.+. -...+..+|+.|-.++++.+ +...+..+.+..++.|..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~~~~~~~g~~~ 176 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD---NRGLFEYSLVSFSQYGMKL 176 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES---CHHHHHHHHHHHHHHTCEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC---CHHHHHHHHHHHHHCCCee
Confidence 66431 23334456667777777643 4556677777777777544
No 414
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=94.66 E-value=0.065 Score=51.06 Aligned_cols=68 Identities=9% Similarity=0.152 Sum_probs=55.5
Q ss_pred cccCCHHHHhcCC-CCcEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 60 KVYGSYEALLDDK-DIDAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 60 ~~~~~~~e~l~~~-~~D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.+|.++.++.+.+ .+|+++|++|...-...+.+|+++|.+++|= .-....+.-++|.+.|+++|+.++
T Consensus 22 Pv~~~~~~~~~~p~~~DlavI~vPa~~v~~~v~e~~~~Gv~~vii-s~Gf~~~~~~~l~~~A~~~g~rli 90 (480)
T 3dmy_A 22 TQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMF-SDNVTLEDEIQLKTRAREKGLLVM 90 (480)
T ss_dssp EEESSHHHHHHHSTTCCEEEECSCHHHHHHHHHHHHHTTCEEEEC-CCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cccchHHHHHhcCCCCCEEEEecCHHHHHHHHHHHHhcCCCEEEE-CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4788888887653 7999999999999999999999999767662 123347777899999999998765
No 415
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.64 E-value=0.075 Score=50.59 Aligned_cols=87 Identities=18% Similarity=0.232 Sum_probs=59.3
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC-HHHHHHHHHHcCCCCCCcccCCHH-HHhcCCCCcEEEEcCCCc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS-LEKATNFAKANNFPPDAKVYGSYE-ALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~-e~l~~~~~D~V~i~~~~~ 84 (362)
+..+|.|||.|..|...++.|.+. +.+|+ |+|++ .+..+.+.++.++. -....++ +.|+ +.|+|+++|...
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~-ga~V~-vi~~~~~~~~~~l~~~~~i~---~~~~~~~~~~l~--~~~lVi~at~~~ 83 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEA-GARLT-VNALTFIPQFTVWANEGMLT---LVEGPFDETLLD--SCWLAIAATDDD 83 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHT-TBEEE-EEESSCCHHHHHHHTTTSCE---EEESSCCGGGGT--TCSEEEECCSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-cCEEE-EEcCCCCHHHHHHHhcCCEE---EEECCCCccccC--CccEEEEcCCCH
Confidence 356899999999999999999887 67777 44443 23345554444432 1122222 2343 589999998887
Q ss_pred -ccHHHHHHHHHcCCeE
Q 018020 85 -MHVKWAISVAQKKKHL 100 (362)
Q Consensus 85 -~h~~~~~~al~~gk~V 100 (362)
....++..|-++|+.|
T Consensus 84 ~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 84 TVNQRVSDAAESRRIFC 100 (457)
T ss_dssp HHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCEE
Confidence 5788888888899876
No 416
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=94.61 E-value=0.054 Score=49.16 Aligned_cols=73 Identities=12% Similarity=0.152 Sum_probs=50.0
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-----CHHHHHHHHHHcCCCCCCcccC----------CHHHHhc
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-----SLEKATNFAKANNFPPDAKVYG----------SYEALLD 70 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-----~~~~~~~~~~~~~~~~~~~~~~----------~~~e~l~ 70 (362)
|++|||+++|...++...+..+.+. +.+|++|+.. .+...+.+|.++|+| +...+ ++-+.|.
T Consensus 20 ~~~mrIvf~G~~~fa~~~L~~L~~~-~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIp--v~~~~~~~~~~~~~~~~~~~l~ 96 (329)
T 2bw0_A 20 FQSMKIAVIGQSLFGQEVYCHLRKE-GHEVVGVFTVPDKDGKADPLGLEAEKDGVP--VFKYSRWRAKGQALPDVVAKYQ 96 (329)
T ss_dssp -CCCEEEEECCHHHHHHHHHHHHHT-TCEEEEEEECCCCSSCCCHHHHHHHHHTCC--EEECSCCEETTEECHHHHHHHH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEEeCCCcCCCCCHHHHHHHHcCCC--EEecCcccccccccHHHHHHHH
Confidence 3469999999888877777777665 5899998861 123466788999997 11122 1234455
Q ss_pred CCCCcEEEEcC
Q 018020 71 DKDIDAVYLPL 81 (362)
Q Consensus 71 ~~~~D~V~i~~ 81 (362)
..++|+++++.
T Consensus 97 ~~~~Dliv~a~ 107 (329)
T 2bw0_A 97 ALGAELNVLPF 107 (329)
T ss_dssp TTCCSEEEESS
T ss_pred hcCCCEEEEee
Confidence 67899999864
No 417
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=94.61 E-value=0.13 Score=43.45 Aligned_cols=86 Identities=16% Similarity=0.085 Sum_probs=55.1
Q ss_pred ceeEEEEE--eccHHHHHHHHHHhcCCCcEEEEEEcCCH-HHHHHHHHHcCCCCCCccc------CC-------HHHHhc
Q 018020 7 AAIRFGII--GAADIARKLSRAITLAPNAVLSAVASRSL-EKATNFAKANNFPPDAKVY------GS-------YEALLD 70 (362)
Q Consensus 7 ~~~~v~ii--G~G~~g~~~~~~~~~~~~~~vv~v~d~~~-~~~~~~~~~~~~~~~~~~~------~~-------~~e~l~ 70 (362)
+++||+|+ |.|+-....+..+++--+++|++|+...+ ....+.|+++|+| ..+ .+ +.+.|+
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp---~~~~~~~~~~~r~~~d~~~~~~l~ 80 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIP---THIIPHEEFPSRTDFESTLQKTID 80 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCC---EEECCGGGSSSHHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCC---EEEeCccccCchhHhHHHHHHHHH
Confidence 47899998 66665556666665423589999886433 3445688999997 222 21 234566
Q ss_pred CCCCcEEEEcCCCcccHHHHHHHHH
Q 018020 71 DKDIDAVYLPLPTSMHVKWAISVAQ 95 (362)
Q Consensus 71 ~~~~D~V~i~~~~~~h~~~~~~al~ 95 (362)
..++|+++++.-..--.+-+....+
T Consensus 81 ~~~~Dliv~agy~~il~~~~l~~~~ 105 (215)
T 3tqr_A 81 HYDPKLIVLAGFMRKLGKAFVSHYS 105 (215)
T ss_dssp TTCCSEEEESSCCSCCCHHHHHHTT
T ss_pred hcCCCEEEEccchhhCCHHHHhhcc
Confidence 7789999998765444444444443
No 418
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.55 E-value=0.087 Score=48.60 Aligned_cols=129 Identities=12% Similarity=0.121 Sum_probs=81.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhcC------CCCcEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLDD------KDIDAVY 78 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~~------~~~D~V~ 78 (362)
-+|.|+|+|.+|...+..++.. ++..|.++++++++.+ +++++|.. .++ .++.+.+.. ..+|+|+
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~-~a~~lGa~---~vi~~~~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRR-LAEEVGAT---ATVDPSAGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHH-HHHHHTCS---EEECTTSSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHH-HHHHcCCC---EEECCCCcCHHHHHHhhhhccCCCCCEEE
Confidence 4789999999999888888876 6633446778877655 66777753 222 244443322 3699999
Q ss_pred EcCCCcccHHHHHHHHHcCCe-EEEeC-----CCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCc
Q 018020 79 LPLPTSMHVKWAISVAQKKKH-LLMEK-----PMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 79 i~~~~~~h~~~~~~al~~gk~-V~~EK-----P~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~i 152 (362)
-++......+.+..+++.|-. |++-- ++..+... .-.+++.+.-.+. +...+..+-+++ ++|.+
T Consensus 259 d~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~-------~~~~~~~i~g~~~--~~~~~~~~~~l~-~~g~i 328 (370)
T 4ej6_A 259 ECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFD-------ILFRELRVLGSFI--NPFVHRRAADLV-ATGAI 328 (370)
T ss_dssp ECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHH-------HHHTTCEEEECCS--CTTCHHHHHHHH-HTTCS
T ss_pred ECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHH-------HHhCCcEEEEecc--ChHHHHHHHHHH-HcCCC
Confidence 999887777888888877644 44432 33334322 2234455443322 334578888888 67766
No 419
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.54 E-value=0.12 Score=47.33 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=26.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS 42 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~ 42 (362)
.-||.|||+|..|...+..|... ++.-+.++|.+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D 151 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDND 151 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCC
Confidence 46899999999999998888766 55445577764
No 420
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=94.53 E-value=0.29 Score=40.60 Aligned_cols=111 Identities=16% Similarity=0.104 Sum_probs=61.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH---HcCCCCCCc-ccCCHHHHhc-CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK---ANNFPPDAK-VYGSYEALLD-DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~---~~~~~~~~~-~~~~~~e~l~-~~~~D~V~i~~~ 82 (362)
..+|.-||||. |.......+..|..+++ .+|.+++..+...+ ..+++ .+. ...|..+.+. ...+|+|++..+
T Consensus 41 ~~~vLDiG~G~-G~~~~~la~~~~~~~v~-~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 41 DLVMWDIGAGS-ASVSIEASNLMPNGRIF-ALERNPQYLGFIRDNLKKFVAR-NVTLVEAFAPEGLDDLPDPDRVFIGGS 117 (204)
T ss_dssp TCEEEEETCTT-CHHHHHHHHHCTTSEEE-EEECCHHHHHHHHHHHHHHTCT-TEEEEECCTTTTCTTSCCCSEEEESCC
T ss_pred CCEEEEECCCC-CHHHHHHHHHCCCCEEE-EEeCCHHHHHHHHHHHHHhCCC-cEEEEeCChhhhhhcCCCCCEEEECCC
Confidence 46899999996 65555555556677776 57898876655433 33442 112 2355544443 257999998765
Q ss_pred CcccHHH---HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 83 TSMHVKW---AISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 83 ~~~h~~~---~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
......+ +.+.|+.|-.+++.- .+.....++.+..++.|
T Consensus 118 ~~~~~~~l~~~~~~LkpgG~l~~~~---~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 118 GGMLEEIIDAVDRRLKSEGVIVLNA---VTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp TTCHHHHHHHHHHHCCTTCEEEEEE---CBHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHhcCCCeEEEEEe---cccccHHHHHHHHHHCC
Confidence 4322222 223344454444432 23444444444444444
No 421
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=94.51 E-value=0.19 Score=43.30 Aligned_cols=112 Identities=12% Similarity=0.045 Sum_probs=68.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhc-CCCcEEEEEEcCCHHHHHHHHHH---cCCCCCCc-ccCCHHHHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITL-APNAVLSAVASRSLEKATNFAKA---NNFPPDAK-VYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~-~~~~~vv~v~d~~~~~~~~~~~~---~~~~~~~~-~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
..+|.-+|||. |......++. .|..+++ .+|.+++..+...+. ++++..+. ...|+.+.+.+..+|+|+...|
T Consensus 94 ~~~vldiG~G~-G~~~~~l~~~~~~~~~v~-~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~ 171 (255)
T 3mb5_A 94 GDFIVEAGVGS-GALTLFLANIVGPEGRVV-SYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDLP 171 (255)
T ss_dssp TCEEEEECCTT-SHHHHHHHHHHCTTSEEE-EECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECSS
T ss_pred CCEEEEecCCc-hHHHHHHHHHhCCCeEEE-EEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECCC
Confidence 46899999997 5544444444 4567766 578988765544333 45432122 3467777776667999998766
Q ss_pred Ccc-cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 83 TSM-HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 83 ~~~-h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
... -.+.+.++|+.|-.+++.-| +.++..++.+..++.|
T Consensus 172 ~~~~~l~~~~~~L~~gG~l~~~~~---~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 172 QPERVVEHAAKALKPGGFFVAYTP---CSNQVMRLHEKLREFK 211 (255)
T ss_dssp CGGGGHHHHHHHEEEEEEEEEEES---SHHHHHHHHHHHHHTG
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEC---CHHHHHHHHHHHHHcC
Confidence 542 45666667777666665433 3455555555555544
No 422
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=94.47 E-value=0.16 Score=46.41 Aligned_cols=89 Identities=6% Similarity=-0.058 Sum_probs=56.5
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHH--HHHHHHHHcCCCCCCcccC-------CHHHHhcCC-CCcEE
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLE--KATNFAKANNFPPDAKVYG-------SYEALLDDK-DIDAV 77 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~--~~~~~~~~~~~~~~~~~~~-------~~~e~l~~~-~~D~V 77 (362)
-+|.|+|+ |.+|...++.++.. ++++++++++++. ...++++++|.. .+++ ++.++.... .+|+|
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~~~~~~~~Dvv 244 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGAE---HVITEEELRRPEMKNFFKDMPQPRLA 244 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTCS---EEEEHHHHHSGGGGGTTSSSCCCSEE
T ss_pred CEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCCc---EEEecCcchHHHHHHHHhCCCCceEE
Confidence 47999998 99999888887766 7888888877542 234566788853 2332 122222221 48999
Q ss_pred EEcCCCcccHHHHHHHHHcC-CeEEE
Q 018020 78 YLPLPTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~g-k~V~~ 102 (362)
+-++....-. .+..+++.| +-|++
T Consensus 245 id~~g~~~~~-~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 245 LNCVGGKSST-ELLRQLARGGTMVTY 269 (357)
T ss_dssp EESSCHHHHH-HHHTTSCTTCEEEEC
T ss_pred EECCCcHHHH-HHHHhhCCCCEEEEE
Confidence 9998764433 355566555 44444
No 423
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.43 E-value=0.059 Score=47.54 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=55.3
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---CCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---PDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
|||.|+|+ |++|...+..|.+.++.+|+++ +|++++...+.. .++. -+..-.++++++++ ++|+|+.+....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~-~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIG-VRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFK--GMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEE-ESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTT--TCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEE-ECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHh--CCCEEEEeCCCC
Confidence 46999995 9999999998887767887755 566654433211 1111 00111123444555 599999876643
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV 125 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~ 125 (362)
.... .++...+.++++|++.|+
T Consensus 77 ~~~~-------------------~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 77 HPSF-------------------KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CSHH-------------------HHHHHHHHHHHHHHHTTC
T ss_pred ccch-------------------hhHHHHHHHHHHHHHcCC
Confidence 2211 134555667777777664
No 424
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.37 E-value=0.18 Score=44.75 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=44.1
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCC-----HHHHHHHHH--HcCCC---CCCcccCCHHHHhcCCCCcE
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRS-----LEKATNFAK--ANNFP---PDAKVYGSYEALLDDKDIDA 76 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~-----~~~~~~~~~--~~~~~---~~~~~~~~~~e~l~~~~~D~ 76 (362)
+++|.|+|+ |.+|...++.|.+. +.+|++ .+|+ +++++.+.. ..++. -+..-.+++.++++ ++|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d~ 79 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYV-LFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDV 79 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEE-ECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEE-EECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCCE
Confidence 468999995 99999999998876 577775 4565 555544322 12321 01011123445555 5999
Q ss_pred EEEcCCC
Q 018020 77 VYLPLPT 83 (362)
Q Consensus 77 V~i~~~~ 83 (362)
|+.+...
T Consensus 80 vi~~a~~ 86 (313)
T 1qyd_A 80 VISALAG 86 (313)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9987654
No 425
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=94.33 E-value=0.12 Score=49.17 Aligned_cols=66 Identities=14% Similarity=0.065 Sum_probs=50.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
-.+++|+|+|.+|...+..++.. +++|+ ++|+++.++...+.. +. -..+.++++.. +|+|+.++.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~-GA~Vi-v~D~~~~~a~~Aa~~-g~-----dv~~lee~~~~--aDvVi~atG~ 330 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA-GARVI-VTEIDPICALQATME-GL-----QVLTLEDVVSE--ADIFVTTTGN 330 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSCHHHHHHHHHT-TC-----EECCGGGTTTT--CSEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEE-EEcCCHHHHHHHHHh-CC-----ccCCHHHHHHh--cCEEEeCCCC
Confidence 35799999999999999999888 67765 789998877665543 32 24577887774 8999977654
No 426
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=94.32 E-value=0.019 Score=54.27 Aligned_cols=111 Identities=14% Similarity=0.055 Sum_probs=66.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh---cCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALL---DDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l---~~~~~D~V~i~~~~~ 84 (362)
+|||.|||.|......+..+.+.+++.-+.+++.++... ..++..+++ .-+.|++.++ ...++|+|++.....
T Consensus 3 ~mkvlviG~ggre~ala~~l~~s~~v~~v~~~pgn~g~~-~~~~~~~~~---~~~~d~~~l~~~a~~~~id~vv~g~e~~ 78 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQSPLADKIYVAPGNAGTA-LEPTLENVD---IAATDIAGLLAFAQSHDIGLTIVGPEAP 78 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCHHHH-HCTTCEECC---CCTTCHHHHHHHHHHTTEEEEEECSHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCCEEEEECCCHHHh-hhcccceec---CCcCCHHHHHHHHHHhCcCEEEECCchH
Confidence 589999999965556677777888876666777666433 222211122 1245677665 346799988753222
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHH------HHHHHHHHcCCEE
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFD------VILNACEENGVQL 127 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~------~l~~~a~~~~~~~ 127 (362)
.-..++..+-+.|.+++. .+.+.++ .+.++++++|++.
T Consensus 79 l~~~~~~~l~~~Gi~~~G-----p~~~a~~~~~dK~~~k~~l~~~GIpt 122 (431)
T 3mjf_A 79 LVIGVVDAFRAAGLAIFG-----PTQAAAQLEGSKAFTKDFLARHNIPS 122 (431)
T ss_dssp HHTTHHHHHHHTTCCEES-----CCHHHHHHHHCHHHHHHHHHHTTCSB
T ss_pred HHHHHHHHHHhcCCCeeC-----CCHHHHHHhhCHHHHHHHHHHcCCCC
Confidence 223455555567888773 2333332 2335667788775
No 427
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.31 E-value=0.1 Score=46.88 Aligned_cols=73 Identities=15% Similarity=0.247 Sum_probs=43.7
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcC-CCcEEEEEEcCCHHHHHHHHHHc-CCCCCCccc----CCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIG-AADIARKLSRAITLA-PNAVLSAVASRSLEKATNFAKAN-NFPPDAKVY----GSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~-~~~~vv~v~d~~~~~~~~~~~~~-~~~~~~~~~----~~~~e~l~~~~~D~V~i~~ 81 (362)
|||+||| +|.+|...+..+... +-..-+.++|+++ +++..+.++ +.+..+.+. ++..+.+++ .|+|+++.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~--aDivii~a 77 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEG--ADVVLISA 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTT--CSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCC--CCEEEEeC
Confidence 5899999 899999888877653 4444455889876 222222221 222212232 233445554 99999986
Q ss_pred CCc
Q 018020 82 PTS 84 (362)
Q Consensus 82 ~~~ 84 (362)
..+
T Consensus 78 g~~ 80 (312)
T 3hhp_A 78 GVA 80 (312)
T ss_dssp SCS
T ss_pred CCC
Confidence 543
No 428
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.28 E-value=0.062 Score=45.98 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=43.2
Q ss_pred CceeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---CCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 6 QAAIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---PDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 6 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
|.+.+|.|.| +|.+|...+..|.+.+..+|+ +++|++++.+..... ++. -+..-.++++++++ ++|+|+.+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~-~~~R~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~a 96 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQT-LFARQPAKIHKPYPT-NSQIIMGDVLNHAALKQAMQ--GQDIVYANL 96 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEE-EEESSGGGSCSSCCT-TEEEEECCTTCHHHHHHHHT--TCSEEEEEC
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEE-EEEcChhhhcccccC-CcEEEEecCCCHHHHHHHhc--CCCEEEEcC
Confidence 3457899999 589999999999877447766 456776544321110 100 01111223444555 489998765
Q ss_pred CC
Q 018020 82 PT 83 (362)
Q Consensus 82 ~~ 83 (362)
..
T Consensus 97 ~~ 98 (236)
T 3qvo_A 97 TG 98 (236)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 429
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.21 E-value=0.18 Score=45.84 Aligned_cols=134 Identities=10% Similarity=0.035 Sum_probs=75.3
Q ss_pred eEEEEEecc-HHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC--CH----HHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGAA-DIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG--SY----EALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G-~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~----~e~l~~~~~D~V~i~~ 81 (362)
-+|.|+|+| .+|...+..++...+++++ +.++++++.+.+ +++|... +.-+. +. .++.....+|+|+.++
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi-~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 248 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVSGATII-GVDVREEAVEAA-KRAGADY-VINASMQDPLAEIRRITESKGVDAVIDLN 248 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEE-EEESSHHHHHHH-HHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred CEEEEECCCccHHHHHHHHHHHcCCCeEE-EEcCCHHHHHHH-HHhCCCE-EecCCCccHHHHHHHHhcCCCceEEEECC
Confidence 468999998 8899888888766467766 567787776655 5566320 00111 22 2333213699999998
Q ss_pred CCcccHHHHHHHHHcC-CeEEEeCCC---CCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 82 PTSMHVKWAISVAQKK-KHLLMEKPM---ALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~EKP~---~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
......+.+..+++.| +-|++--+- ..+... .. .+++.+. +........+..+.+++ ++|.|-.
T Consensus 249 g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~------~~-~~~~~i~-g~~~~~~~~~~~~~~l~-~~g~l~~ 316 (347)
T 1jvb_A 249 NSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPL------IT-LSEIQFV-GSLVGNQSDFLGIMRLA-EAGKVKP 316 (347)
T ss_dssp CCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHH------HH-HHTCEEE-ECCSCCHHHHHHHHHHH-HTTSSCC
T ss_pred CCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCHHH------HH-hCceEEE-EEeccCHHHHHHHHHHH-HcCCCCc
Confidence 8765555566666655 334443221 233321 11 2334443 32222223566777777 6777643
No 430
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.16 E-value=0.11 Score=47.43 Aligned_cols=89 Identities=12% Similarity=0.045 Sum_probs=57.9
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh----cCCCCcEEEEcCCC
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALL----DDKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l----~~~~~D~V~i~~~~ 83 (362)
-+|.|+| +|.+|...+..++.. +++++++ .++++.+ +++++|... +....++.+.+ ....+|+|+.++..
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~--~~~~~~~-~~~~lGa~~-i~~~~~~~~~~~~~~~~~g~D~vid~~g~ 226 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALAR-GARVFAT--ARGSDLE-YVRDLGATP-IDASREPEDYAAEHTAGQGFDLVYDTLGG 226 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEE--ECHHHHH-HHHHHTSEE-EETTSCHHHHHHHHHTTSCEEEEEESSCT
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEE--eCHHHHH-HHHHcCCCE-eccCCCHHHHHHHHhcCCCceEEEECCCc
Confidence 4799999 699999888888766 7788877 4566655 456677531 11123333332 33479999999885
Q ss_pred cccHHHHHHHHHcC-CeEEEe
Q 018020 84 SMHVKWAISVAQKK-KHLLME 103 (362)
Q Consensus 84 ~~h~~~~~~al~~g-k~V~~E 103 (362)
.....+..+++.| +-|.+-
T Consensus 227 -~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 227 -PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp -HHHHHHHHHEEEEEEEEESC
T ss_pred -HHHHHHHHHHhcCCeEEEEc
Confidence 4555666677665 444443
No 431
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.15 E-value=0.46 Score=44.81 Aligned_cols=87 Identities=15% Similarity=0.129 Sum_probs=56.3
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC----C-------------------
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG----S------------------- 64 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~----~------------------- 64 (362)
-+|.|+|+ |.+|...+..++.. +++++++. +++++.+. ++++|.. .+++ +
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~-~~~~~~~~-~~~lGa~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNG-GGIPVAVV-SSAQKEAA-VRALGCD---LVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEE-SSHHHHHH-HHHTTCC---CEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCEEEEEe-CCHHHHHH-HHhcCCC---EEEecccccccccccccccccchhhhHH
Confidence 47899998 99999888888866 78877654 67776665 4677753 1221 1
Q ss_pred HHHHhc--CCCCcEEEEcCCCcccHHHHHHHHHcCCe-EEE
Q 018020 65 YEALLD--DKDIDAVYLPLPTSMHVKWAISVAQKKKH-LLM 102 (362)
Q Consensus 65 ~~e~l~--~~~~D~V~i~~~~~~h~~~~~~al~~gk~-V~~ 102 (362)
.+++.+ ...+|+|+.++... ..+.+..+++.|-. |++
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHhCCCceEEEECCCch-HHHHHHHHHhcCCEEEEE
Confidence 122211 24699999988873 45566666666533 443
No 432
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=94.13 E-value=0.12 Score=43.80 Aligned_cols=88 Identities=17% Similarity=0.131 Sum_probs=53.2
Q ss_pred eEEEEE--eccHHHHHHHHHHhcCC-CcEEEEEEcC-CHHHHHHHHHHcCCCC---CCcccC-------CHHHHhcCCCC
Q 018020 9 IRFGII--GAADIARKLSRAITLAP-NAVLSAVASR-SLEKATNFAKANNFPP---DAKVYG-------SYEALLDDKDI 74 (362)
Q Consensus 9 ~~v~ii--G~G~~g~~~~~~~~~~~-~~~vv~v~d~-~~~~~~~~~~~~~~~~---~~~~~~-------~~~e~l~~~~~ 74 (362)
+||+|+ |.|......+..+.+.. +++|++|+.. ........|+++|+|- ...-+. .+-+.|+..++
T Consensus 4 ~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 83 (212)
T 3av3_A 4 KRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQI 83 (212)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred cEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCC
Confidence 456655 66776777777776543 5888888754 3345677899999971 001111 12244555689
Q ss_pred cEEEEcCCCcccHHHHHHHHHc
Q 018020 75 DAVYLPLPTSMHVKWAISVAQK 96 (362)
Q Consensus 75 D~V~i~~~~~~h~~~~~~al~~ 96 (362)
|+++++.-..--.+-+....+.
T Consensus 84 Dliv~a~y~~il~~~~l~~~~~ 105 (212)
T 3av3_A 84 DWIALAGYMRLIGPTLLSAYEG 105 (212)
T ss_dssp CEEEESSCCSCCCHHHHHHTTT
T ss_pred CEEEEchhhhhCCHHHHhhhcC
Confidence 9999987655444444444443
No 433
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.07 E-value=0.12 Score=47.12 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=47.9
Q ss_pred CceeEEEEEec-cHHHHHHHHHHhcCCCc-----EEEEEEcCCHH--HHHHHHHHc---CCC--CCCcccCCHHHHhcCC
Q 018020 6 QAAIRFGIIGA-ADIARKLSRAITLAPNA-----VLSAVASRSLE--KATNFAKAN---NFP--PDAKVYGSYEALLDDK 72 (362)
Q Consensus 6 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~-----~vv~v~d~~~~--~~~~~~~~~---~~~--~~~~~~~~~~e~l~~~ 72 (362)
|+++||+|+|+ |.+|+..+..+...+-+ .-+.++|..+. +++-.+-+. ..+ ......++..+.+++
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~- 100 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDG- 100 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTT-
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCC-
Confidence 56899999996 99999888877654322 23458898653 233332221 221 123456777777775
Q ss_pred CCcEEEEcCC
Q 018020 73 DIDAVYLPLP 82 (362)
Q Consensus 73 ~~D~V~i~~~ 82 (362)
.|+|+|+.-
T Consensus 101 -advVvi~aG 109 (345)
T 4h7p_A 101 -VAIAIMCGA 109 (345)
T ss_dssp -CSEEEECCC
T ss_pred -CCEEEECCC
Confidence 999999653
No 434
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=94.05 E-value=0.22 Score=43.69 Aligned_cols=112 Identities=13% Similarity=0.071 Sum_probs=66.5
Q ss_pred eeEEEEEeccHHHHHHHHHHhc-CCCcEEEEEEcCCHHHHHHHHHH---cCCCCCCc-ccCCHHHHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITL-APNAVLSAVASRSLEKATNFAKA---NNFPPDAK-VYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~-~~~~~vv~v~d~~~~~~~~~~~~---~~~~~~~~-~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
..+|.-+|||. |......++. .|..+++ .+|.+++..+...+. +++.+.+. ...|+.+.+....+|+|+...|
T Consensus 113 ~~~VLDiG~G~-G~~~~~la~~~~~~~~v~-~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 113 GDRIIDTGVGS-GAMCAVLARAVGSSGKVF-AYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVP 190 (277)
T ss_dssp TCEEEEECCTT-SHHHHHHHHHTTTTCEEE-EECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCS
T ss_pred CCEEEEECCcC-CHHHHHHHHHhCCCcEEE-EEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCc
Confidence 35899999998 6544444555 3466766 578888766554433 34321112 2456666665557999998666
Q ss_pred Cc-ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 83 TS-MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 83 ~~-~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
.. .-.+.+.++|+.|-.+++.-| +..+..++.+..++.|
T Consensus 191 ~~~~~l~~~~~~L~pgG~l~~~~~---~~~~~~~~~~~l~~~g 230 (277)
T 1o54_A 191 DPWNYIDKCWEALKGGGRFATVCP---TTNQVQETLKKLQELP 230 (277)
T ss_dssp CGGGTHHHHHHHEEEEEEEEEEES---SHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHcCCCCEEEEEeC---CHHHHHHHHHHHHHCC
Confidence 54 445556666666656666544 3344455555555544
No 435
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.02 E-value=0.33 Score=44.05 Aligned_cols=132 Identities=14% Similarity=0.115 Sum_probs=76.6
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHH----hcCCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEAL----LDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~----l~~~~~D~V~i~~ 81 (362)
-+|.|+|+ |.+|...+..++.. ++++++ .++++++.+.+ +++|... +.-+ .++.+. .....+|+|+.++
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~-~~~~~~~~~~~-~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLF-GARVIA-TAGSEDKLRRA-KALGADE-TVNYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHT-TCEEEE-EESSHHHHHHH-HHHTCSE-EEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCEEEE-EeCCHHHHHHH-HhcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 57999999 88999888888876 678765 56777777655 4566420 0011 122222 2224699999998
Q ss_pred CCcccHHHHHHHHHcC-CeEEEeCCC----CCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 82 PTSMHVKWAISVAQKK-KHLLMEKPM----ALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~EKP~----~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
. ....+.+..+++.| +-|++-.+- ..+... .-.+++.+. +........+..+-+++ ++|.+-.
T Consensus 244 g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-------~~~~~~~~~-g~~~~~~~~~~~~~~l~-~~g~l~~ 311 (343)
T 2eih_A 244 G-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAH-------VFYRQLSIL-GSTMASKSRLFPILRFV-EEGKLKP 311 (343)
T ss_dssp C-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTH-------HHHTTCEEE-ECCSCCGGGHHHHHHHH-HHTSSCC
T ss_pred C-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHH-------HHhCCcEEE-EecCccHHHHHHHHHHH-HcCCCCC
Confidence 8 55666777777665 444443221 122211 112344443 33322334567777887 6676643
No 436
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.00 E-value=0.16 Score=47.45 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=63.3
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH---------------HHHHHHHHHcCCC---CCCcccCCHHHH
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL---------------EKATNFAKANNFP---PDAKVYGSYEAL 68 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~---------------~~~~~~~~~~~~~---~~~~~~~~~~e~ 68 (362)
+..||+|.|+|+.|...+..+.+. +.+||+|.|.++ +.+.++.++.+.- ++.. +-+.+++
T Consensus 211 ~g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~-~i~~~~~ 288 (421)
T 2yfq_A 211 EDAKIAVQGFGNVGTFTVKNIERQ-GGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAE-RITDEEF 288 (421)
T ss_dssp GGSCEEEECCSHHHHHHHHHHHHT-TCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC----------------
T ss_pred cCCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCce-EeCccch
Confidence 357899999999999988888877 799999999982 5566666655410 0111 1133566
Q ss_pred hcCCCCcEEEEcCCC-cccHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 69 LDDKDIDAVYLPLPT-SMHVKWAISVAQKKKHLLMEK---PMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 69 l~~~~~D~V~i~~~~-~~h~~~~~~al~~gk~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
+. .++|+++=|... ..+.+-+... +..+++|- |+ + .++.++++ ++|+.+.
T Consensus 289 ~~-~~~DIliP~A~~n~i~~~~A~~l---~ak~VvEgAN~P~--t-~ea~~il~---~~GI~~~ 342 (421)
T 2yfq_A 289 WT-KEYDIIVPAALENVITGERAKTI---NAKLVCEAANGPT--T-PEGDKVLT---ERGINLT 342 (421)
T ss_dssp -------CEEECSCSSCSCHHHHTTC---CCSEEECCSSSCS--C-HHHHHHHH---HHTCEEE
T ss_pred hc-CCccEEEEcCCcCcCCcccHHHc---CCeEEEeCCcccc--C-HHHHHHHH---HCCCEEE
Confidence 65 378988876544 4454444433 55566665 43 2 55665554 6677654
No 437
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.98 E-value=0.054 Score=45.67 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=44.1
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHH----HHhcCCCCcEEEEcCCC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYE----ALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~----e~l~~~~~D~V~i~~~~ 83 (362)
|||.|+|+ |++|...+..|.+. +.+|++ .+|++++...+.. -++. .+..|+. +.+. ++|+|+.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~~~-~~~~---~~~~D~~d~~~~~~~--~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-GHEVLA-VVRDPQKAADRLG-ATVA---TLVKEPLVLTEADLD--SVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEE-EESCHHHHHHHTC-TTSE---EEECCGGGCCHHHHT--TCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-CCEEEE-EEecccccccccC-CCce---EEecccccccHhhcc--cCCEEEECCcc
Confidence 47999997 89999999999877 678775 5688777664422 1211 1111221 4444 58999987655
Q ss_pred c
Q 018020 84 S 84 (362)
Q Consensus 84 ~ 84 (362)
.
T Consensus 73 ~ 73 (224)
T 3h2s_A 73 P 73 (224)
T ss_dssp C
T ss_pred C
Confidence 4
No 438
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=93.97 E-value=0.68 Score=38.50 Aligned_cols=110 Identities=11% Similarity=0.053 Sum_probs=60.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHH---HHcCCCCCCc-ccCCHHHHhc-CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFA---KANNFPPDAK-VYGSYEALLD-DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~---~~~~~~~~~~-~~~~~~e~l~-~~~~D~V~i~~~ 82 (362)
..+|.-||||. |..-....+. +.+++ .+|.+++..+... +++|++.++. ...|..+.+. .+.+|+|++...
T Consensus 56 ~~~vLDlGcG~-G~~~~~la~~--~~~v~-~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 56 GELLWDIGGGS-GSVSVEWCLA--GGRAI-TIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG 131 (204)
T ss_dssp TCEEEEETCTT-CHHHHHHHHT--TCEEE-EEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC
T ss_pred CCEEEEecCCC-CHHHHHHHHc--CCEEE-EEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc
Confidence 46899999997 5543333333 66766 5789887665443 3345531222 2466666443 357999997542
Q ss_pred Ccc-cHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 83 TSM-HVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 83 ~~~-h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
... -.+.+.+.|+.|-.+++.- .+.+...++.+..++.|
T Consensus 132 ~~~~~l~~~~~~LkpgG~lv~~~---~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 132 GSQALYDRLWEWLAPGTRIVANA---VTLESETLLTQLHARHG 171 (204)
T ss_dssp CCHHHHHHHHHHSCTTCEEEEEE---CSHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHhcCCCcEEEEEe---cCcccHHHHHHHHHhCC
Confidence 211 2223333444454555432 24555555555555554
No 439
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.97 E-value=0.12 Score=47.49 Aligned_cols=89 Identities=11% Similarity=0.172 Sum_probs=62.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC----HHHH--------HHHHHHcCCCCCCcccCCHHHHhcCCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS----LEKA--------TNFAKANNFPPDAKVYGSYEALLDDKDI 74 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~----~~~~--------~~~~~~~~~~~~~~~~~~~~e~l~~~~~ 74 (362)
+..||.++|+|.+|...++.+... +.+=+.++|++ .++. +.++++.+. .....++.|.+.. .
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~---~~~~~~L~eav~~--A 264 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP---ERLSGDLETALEG--A 264 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---TCCCSCHHHHHTT--C
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---cCchhhHHHHHcc--C
Confidence 478999999999999888888776 56445699987 5542 556666542 1346789999986 7
Q ss_pred cEEEEcCC-CcccHHHHHHHHHcCCeEEEe
Q 018020 75 DAVYLPLP-TSMHVKWAISVAQKKKHLLME 103 (362)
Q Consensus 75 D~V~i~~~-~~~h~~~~~~al~~gk~V~~E 103 (362)
|+++-++. .-...++++. ++. .+|+.+
T Consensus 265 DVlIG~Sap~l~t~emVk~-Ma~-~pIIfa 292 (388)
T 1vl6_A 265 DFFIGVSRGNILKPEWIKK-MSR-KPVIFA 292 (388)
T ss_dssp SEEEECSCSSCSCHHHHTT-SCS-SCEEEE
T ss_pred CEEEEeCCCCccCHHHHHh-cCC-CCEEEE
Confidence 99886544 4456666666 443 456654
No 440
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.95 E-value=0.28 Score=44.71 Aligned_cols=130 Identities=13% Similarity=0.070 Sum_probs=78.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC---C-HHHHhc------CCCCcEEE
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG---S-YEALLD------DKDIDAVY 78 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~---~-~~e~l~------~~~~D~V~ 78 (362)
-+|.|+|+|.+|...++.++.. +++|+ +.++++++.+. ++++|.. .+.-+. + .+++.+ ...+|+|+
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi-~~~~~~~~~~~-~~~lGa~-~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY-GAFVV-CTARSPRRLEV-AKNCGAD-VTLVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EEESCHHHHHH-HHHTTCS-EEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEE-EEcCCHHHHHH-HHHhCCC-EEEcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 4789999999999888888776 67754 56778776654 4677753 111122 1 233332 24699999
Q ss_pred EcCCCcccHHHHHHHHHcCCeE-EEe---CCCCCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCc
Q 018020 79 LPLPTSMHVKWAISVAQKKKHL-LME---KPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 79 i~~~~~~h~~~~~~al~~gk~V-~~E---KP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~i 152 (362)
.++......+.+..+++.|-.+ ++- .+...+.. ..-.+++.+.-. +++...+..+.+++ ++|.+
T Consensus 246 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-------~~~~~~~~i~g~--~~~~~~~~~~~~l~-~~g~i 313 (352)
T 1e3j_A 246 DCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLV-------NACAREIDIKSV--FRYCNDYPIALEMV-ASGRC 313 (352)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHH-------HHHTTTCEEEEC--CSCSSCHHHHHHHH-HTTSC
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHH-------HHHhcCcEEEEe--ccchHHHHHHHHHH-HcCCC
Confidence 9998876667777788776444 332 22333331 122334444322 23455677788888 66764
No 441
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=93.94 E-value=0.096 Score=46.95 Aligned_cols=70 Identities=11% Similarity=0.123 Sum_probs=49.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC-HH-------HHHHHHHHcCCCCCCcccCC-----HHHHhcCCCCc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRS-LE-------KATNFAKANNFPPDAKVYGS-----YEALLDDKDID 75 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~-~~-------~~~~~~~~~~~~~~~~~~~~-----~~e~l~~~~~D 75 (362)
|||++.|++.+|...+..|.+. +++|++|+... .. ..+.+|+++|+| +...++ +.+.|+..++|
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~-~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIp--v~~~~~~~~~~~~~~l~~~~~D 77 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA-GYEISAIFTHTDNPGEKAFYGSVARLAAERGIP--VYAPDNVNHPLWVERIAQLSPD 77 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT-TCEEEEEECCCC------CCCCHHHHHHHHTCC--EECCSCCCSHHHHHHHHHTCCS
T ss_pred CEEEEEEcCHHHHHHHHHHHHC-CCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCC--EECCCcCCcHHHHHHHHhcCCC
Confidence 6899999999988888888765 68999988642 21 267889999997 111222 23455556899
Q ss_pred EEEEcC
Q 018020 76 AVYLPL 81 (362)
Q Consensus 76 ~V~i~~ 81 (362)
+++++.
T Consensus 78 liv~~~ 83 (305)
T 2bln_A 78 VIFSFY 83 (305)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 999864
No 442
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.92 E-value=0.036 Score=50.89 Aligned_cols=73 Identities=15% Similarity=0.128 Sum_probs=43.3
Q ss_pred CceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---CCCc-ccCCHHHHhcCCCCcEEEEc
Q 018020 6 QAAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---PDAK-VYGSYEALLDDKDIDAVYLP 80 (362)
Q Consensus 6 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~~~~-~~~~~~e~l~~~~~D~V~i~ 80 (362)
|+++||.|+|+ |++|...+..|.+.++.+|+++ +++.++...+...-++. -+.. -.++++++++ ++|+|+-+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~-~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih~ 98 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGM-DMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK--KCDVILPL 98 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEE-ESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--HCSEEEEC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEE-eCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--cCCEEEEc
Confidence 44679999994 9999999999887767888865 56554443332211211 0001 1122344555 58999864
Q ss_pred C
Q 018020 81 L 81 (362)
Q Consensus 81 ~ 81 (362)
.
T Consensus 99 A 99 (372)
T 3slg_A 99 V 99 (372)
T ss_dssp B
T ss_pred C
Confidence 3
No 443
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.90 E-value=0.43 Score=43.49 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=56.7
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHHhc---CCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEALLD---DKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~l~---~~~~D~V~i~~ 81 (362)
-+|.|+|+ |.+|...+..++.. ++ ++++ +++++++.+.+.+++|... +.-+ .++.+.+. ...+|+|+.++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~-~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL-GCSRVVG-ICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCSEEEE-EESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCCeEEE-EeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 57899998 99999888888876 67 7764 5677777777766577420 0011 23333221 12699999988
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
.. ...+.+..+++.| +-|++
T Consensus 239 G~-~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 239 GG-NISDTVISQMNENSHIILC 259 (357)
T ss_dssp CH-HHHHHHHHTEEEEEEEEEC
T ss_pred CH-HHHHHHHHHhccCcEEEEE
Confidence 75 3444555555554 44444
No 444
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.90 E-value=0.37 Score=43.48 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=56.8
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHH----HHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYE----ALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~----e~l~~~~~D~V~i~~ 81 (362)
-+|.|+|+ |.+|...+..++.. ++++++ +++++++.+.+ +++|... +.-+ .++. +......+|+|+.++
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~-~~~~~~~~~~~-~~~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHL-GATVIG-TVSTEEKAETA-RKLGCHH-TINYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT-TCEEEE-EESSHHHHHHH-HHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CEEEEECCccHHHHHHHHHHHHC-CCEEEE-EeCCHHHHHHH-HHcCCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 46899995 99999988888877 677664 56787776655 4455320 0001 1222 222234699999998
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
.. ...+.+..+++.| +-|++
T Consensus 223 g~-~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 223 GK-DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp CT-TTHHHHHHTEEEEEEEEEC
T ss_pred cH-HHHHHHHHhhccCCEEEEE
Confidence 87 5566677777665 44444
No 445
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.88 E-value=0.053 Score=47.78 Aligned_cols=104 Identities=14% Similarity=0.128 Sum_probs=61.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---CCCcccCCHHHHhcCCCCcEEEEcCCCc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---PDAKVYGSYEALLDDKDIDAVYLPLPTS 84 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~e~l~~~~~D~V~i~~~~~ 84 (362)
++||.|+|+|++|...+..|.+. +.+|+++. ++++... .++. -+..-.++++++++. ++|+|+.+....
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~ 74 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-GHEVTGLR-RSAQPMP-----AGVQTLIADVTRPDTLASIVHL-RPEILVYCVAAS 74 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEEE-CTTSCCC-----TTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCEEEEEe-CCccccc-----cCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCC
Confidence 57899999999999999999877 67877654 5543210 1111 011112233344442 599998754321
Q ss_pred ccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC--EEEEeeec
Q 018020 85 MHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV--QLMDGTMW 133 (362)
Q Consensus 85 ~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~--~~~v~~~~ 133 (362)
... -++-...++.....++++|++.++ .+++....
T Consensus 75 ----------~~~----~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~ 111 (286)
T 3gpi_A 75 ----------EYS----DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG 111 (286)
T ss_dssp ----------HHC---------CCSHHHHHHHHHHTTTSCCCEEEEEEEGG
T ss_pred ----------CCC----HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccE
Confidence 011 133346689999999999998775 34444433
No 446
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=93.85 E-value=0.12 Score=48.57 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=45.3
Q ss_pred eeEEEEEeccHH-HHHHHHHHhc----CCCcEEEEEEcCCHHHHHH---HHHHc-CCCCCCcccCCHHHHhcCCCCcEEE
Q 018020 8 AIRFGIIGAADI-ARKLSRAITL----APNAVLSAVASRSLEKATN---FAKAN-NFPPDAKVYGSYEALLDDKDIDAVY 78 (362)
Q Consensus 8 ~~~v~iiG~G~~-g~~~~~~~~~----~~~~~vv~v~d~~~~~~~~---~~~~~-~~~~~~~~~~~~~e~l~~~~~D~V~ 78 (362)
++||+|||+|+. +..++..+.. .+..+| .++|.++++++. ++... .....+..++|+.+.+++ .|+|+
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el-~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~--AD~Vi 78 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEV-IFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVD--AKYVI 78 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEE-EEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEE-EEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCC--CCEEE
Confidence 579999999984 2233333332 223454 499999988654 22211 100112335788888886 99999
Q ss_pred EcCCCc
Q 018020 79 LPLPTS 84 (362)
Q Consensus 79 i~~~~~ 84 (362)
++....
T Consensus 79 itagvg 84 (417)
T 1up7_A 79 FQFRPG 84 (417)
T ss_dssp ECCCTT
T ss_pred EcCCCC
Confidence 998654
No 447
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=93.84 E-value=0.11 Score=47.09 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=44.2
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCc------EEEEEEcCCH--HHHHHHHHHc---CCC--CCCcccCCHHHHhcCC
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNA------VLSAVASRSL--EKATNFAKAN---NFP--PDAKVYGSYEALLDDK 72 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~------~vv~v~d~~~--~~~~~~~~~~---~~~--~~~~~~~~~~e~l~~~ 72 (362)
++|||.|+|+ |++|...+..|...+.+ +|+ ++|+.+ ++.+..+.+. .++ .++...+++.+.++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~-l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~-- 79 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQ-LLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK-- 79 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEE-EECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEE-EEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhC--
Confidence 3689999996 99999988888765322 655 578763 3333222211 111 11222356777776
Q ss_pred CCcEEEEcC
Q 018020 73 DIDAVYLPL 81 (362)
Q Consensus 73 ~~D~V~i~~ 81 (362)
++|+|+.+.
T Consensus 80 ~~D~Vih~A 88 (327)
T 1y7t_A 80 DADYALLVG 88 (327)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEECC
Confidence 499999863
No 448
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.79 E-value=0.28 Score=41.92 Aligned_cols=91 Identities=9% Similarity=-0.018 Sum_probs=50.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH---cCCCCCCc-ccCCHHHHh-cCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA---NNFPPDAK-VYGSYEALL-DDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~---~~~~~~~~-~~~~~~e~l-~~~~~D~V~i~~~ 82 (362)
..+|..+|+|. |......++. ..+++ .+|.+++..+...+. .++.+.+. ...|+.+.+ ....+|+|+...|
T Consensus 92 ~~~vldiG~G~-G~~~~~l~~~--~~~v~-~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 92 EKRVLEFGTGS-GALLAVLSEV--AGEVW-TFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR 167 (248)
T ss_dssp TCEEEEECCTT-SHHHHHHHHH--SSEEE-EECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS
T ss_pred CCEEEEeCCCc-cHHHHHHHHh--CCEEE-EEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc
Confidence 45899999995 6544444444 45655 678888776654433 34422222 235555554 4457999998665
Q ss_pred Cc-ccHHHHHHHHHcCCeEEE
Q 018020 83 TS-MHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 83 ~~-~h~~~~~~al~~gk~V~~ 102 (362)
.. .-.+.+.++|+.|-.+++
T Consensus 168 ~~~~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 168 EPWHYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp CGGGGHHHHHHHBCTTCEEEE
T ss_pred CHHHHHHHHHHHcCCCCEEEE
Confidence 43 233333344444433333
No 449
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.77 E-value=0.14 Score=45.52 Aligned_cols=86 Identities=19% Similarity=0.125 Sum_probs=50.1
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCC------HHHHHHHHH--HcCCC---CCCcccCCHHHHhcCCCCc
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRS------LEKATNFAK--ANNFP---PDAKVYGSYEALLDDKDID 75 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~------~~~~~~~~~--~~~~~---~~~~~~~~~~e~l~~~~~D 75 (362)
+++|.|+|+ |.+|...++.|.+. +.+|++ .+|+ +++++.+.. ..++. -+..-.+++.++++ ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~-l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d 79 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-GHPTFL-LVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK--NVD 79 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEE-ECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEE-EECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc--CCC
Confidence 467999996 99999999998877 477664 4554 444433321 12321 00011123444555 499
Q ss_pred EEEEcCCCc---ccHHHHHHHHHcC
Q 018020 76 AVYLPLPTS---MHVKWAISVAQKK 97 (362)
Q Consensus 76 ~V~i~~~~~---~h~~~~~~al~~g 97 (362)
+|+.+.... ....++..|.++|
T Consensus 80 ~vi~~a~~~~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 80 VVISTVGSLQIESQVNIIKAIKEVG 104 (308)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred EEEECCcchhhhhHHHHHHHHHhcC
Confidence 999887643 2344555555555
No 450
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.73 E-value=0.11 Score=46.52 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=48.0
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHH-HHHHHH--HHcCCC---CCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLE-KATNFA--KANNFP---PDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~-~~~~~~--~~~~~~---~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
.+|.|+|+ |.+|...++.|.+. +.+|+++ +|+++ +.+.+. ...++. -+..-.+++.++++ ++|+|+.+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l-~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a 87 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-GHPTYVF-TRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK--KVDVVISAL 87 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-TCCEEEE-ECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHC-CCcEEEE-ECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc--CCCEEEECC
Confidence 37999996 99999999998877 5777754 45542 222221 122321 00011123445555 599999877
Q ss_pred CCc---ccHHHHHHHHHcC
Q 018020 82 PTS---MHVKWAISVAQKK 97 (362)
Q Consensus 82 ~~~---~h~~~~~~al~~g 97 (362)
... ....++..|.++|
T Consensus 88 ~~~~~~~~~~l~~aa~~~g 106 (318)
T 2r6j_A 88 AFPQILDQFKILEAIKVAG 106 (318)
T ss_dssp CGGGSTTHHHHHHHHHHHC
T ss_pred chhhhHHHHHHHHHHHhcC
Confidence 642 2334444444444
No 451
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.71 E-value=0.41 Score=44.43 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=56.3
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC---CHHH-Hh---cCCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG---SYEA-LL---DDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~e-~l---~~~~~D~V~i~~ 81 (362)
-+|.|+|+|.+|...++.++.. ++..|.+.|+++++.+. ++++|.. +..+. ++.+ +. ....+|+|+-++
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~-a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~ 262 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAH-AKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVDAV 262 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHH-HHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHH-HHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 4789999999999888888877 66334456788776654 4678752 11222 1333 22 224699999998
Q ss_pred CCcc---------------cHHHHHHHHHcCCe
Q 018020 82 PTSM---------------HVKWAISVAQKKKH 99 (362)
Q Consensus 82 ~~~~---------------h~~~~~~al~~gk~ 99 (362)
.... ..+.+.++++.|-.
T Consensus 263 G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 295 (398)
T 1kol_A 263 GFEARGHGHEGAKHEAPATVLNSLMQVTRVAGK 295 (398)
T ss_dssp CTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEE
T ss_pred CCcccccccccccccchHHHHHHHHHHHhcCCE
Confidence 7652 45666677766533
No 452
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=93.64 E-value=0.15 Score=45.96 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=51.8
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CH----------HHHHHHHHHcCCCCCCcccCC-----HHHHhc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SL----------EKATNFAKANNFPPDAKVYGS-----YEALLD 70 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~----------~~~~~~~~~~~~~~~~~~~~~-----~~e~l~ 70 (362)
++|||+++|++..+...+..|.+. +.+|++|+.. +. ...+.+|.++|+| +....+ +.+.|.
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~-~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIp--v~~~~~~~~~~~~~~l~ 78 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS-GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLP--VFQPVSLRPQENQQLVA 78 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT-TCEEEEEECCCCBC------CBCCHHHHHHHHTTCC--EECCSCSCSHHHHHHHH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC-CCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCc--EEecCCCCCHHHHHHHH
Confidence 479999999999888888888765 6899998863 21 2467889999997 111122 224455
Q ss_pred CCCCcEEEEcCC
Q 018020 71 DKDIDAVYLPLP 82 (362)
Q Consensus 71 ~~~~D~V~i~~~ 82 (362)
..++|+++++.-
T Consensus 79 ~~~~Dliv~~~y 90 (314)
T 1fmt_A 79 ELQADVMVVVAY 90 (314)
T ss_dssp HTTCSEEEEESC
T ss_pred hcCCCEEEEeec
Confidence 568999998644
No 453
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=93.64 E-value=0.098 Score=48.86 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=73.4
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC----------HHHHHHHHHHcCCCCCC-cccCCHHHHhcCCCCc
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS----------LEKATNFAKANNFPPDA-KVYGSYEALLDDKDID 75 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~----------~~~~~~~~~~~~~~~~~-~~~~~~~e~l~~~~~D 75 (362)
+..||+|-|+|+.|...+..+.+. +.++|+|+|.+ .+.+.++.++.+.-.+. .-+-+.++++.. ++|
T Consensus 220 ~g~~vaVqG~GnVG~~aa~~l~e~-GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~-~~D 297 (424)
T 3k92_A 220 QNARIIIQGFGNAGSFLAKFMHDA-GAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEK-DCD 297 (424)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-TCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHS-CCS
T ss_pred ccCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceec-ccc
Confidence 457899999999999888888776 89999999987 77777766655410000 112356788875 799
Q ss_pred EEEEcCC-CcccHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEEEe
Q 018020 76 AVYLPLP-TSMHVKWAISVAQKKKHLLMEK---PMALNVAEFDVILNACEENGVQLMDG 130 (362)
Q Consensus 76 ~V~i~~~-~~~h~~~~~~al~~gk~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~v~ 130 (362)
+.+=|.. +..+.+-+... +..+++|- |+ + .++.+ ..+++|+.+..+
T Consensus 298 IliPcA~~n~I~~~~a~~l---~ak~V~EgAN~p~--t-~eA~~---iL~~rGI~~~PD 347 (424)
T 3k92_A 298 ILVPAAISNQITAKNAHNI---QASIVVERANGPT--T-IDATK---ILNERGVLLVPD 347 (424)
T ss_dssp EEEECSCSSCBCTTTGGGC---CCSEEECCSSSCB--C-HHHHH---HHHHTTCEEECH
T ss_pred EEeecCcccccChhhHhhc---CceEEEcCCCCCC--C-HHHHH---HHHHCCCEEECc
Confidence 9987644 33344333332 66677775 43 2 34443 346678776544
No 454
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=93.60 E-value=0.53 Score=41.99 Aligned_cols=75 Identities=19% Similarity=0.130 Sum_probs=44.2
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcC------CCCCC-cccCCHHHHhc---CCCCcE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANN------FPPDA-KVYGSYEALLD---DKDIDA 76 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~------~~~~~-~~~~~~~e~l~---~~~~D~ 76 (362)
+..||..||||. |......++..+..+++ ++|.+++..+...+.+. ..+.+ ....|..+.+. +...|+
T Consensus 95 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~-~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGD-GGVLREVLRHGTVEHCD-LVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTT-SHHHHHHHTCTTCCEEE-EEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCC-CHHHHHHHhCCCCCEEE-EEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 457999999997 43333333333345655 68999876665544330 01112 23577777763 457899
Q ss_pred EEEcCCC
Q 018020 77 VYLPLPT 83 (362)
Q Consensus 77 V~i~~~~ 83 (362)
|++-.+.
T Consensus 173 Ii~d~~~ 179 (304)
T 3bwc_A 173 VIIDTTD 179 (304)
T ss_dssp EEEECC-
T ss_pred EEECCCC
Confidence 9985543
No 455
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=93.60 E-value=0.29 Score=42.13 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=54.1
Q ss_pred eeEEEEEeccHHHHHHHHHHhc-CCCcEEEEEEcCCHHHHHHHHHHc----CCCCCCc-ccCCHHHH-hcCCCCcEEEEc
Q 018020 8 AIRFGIIGAADIARKLSRAITL-APNAVLSAVASRSLEKATNFAKAN----NFPPDAK-VYGSYEAL-LDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~-~~~~~vv~v~d~~~~~~~~~~~~~----~~~~~~~-~~~~~~e~-l~~~~~D~V~i~ 80 (362)
..+|.-+|||. |......++. .|..+++ .+|.+++..+...+.+ |.+ .+. ...|+.+. +.+..+|+|+..
T Consensus 97 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~-~~D~~~~~~~~a~~~~~~~~g~~-~v~~~~~d~~~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 97 GMRVLEAGTGS-GGLTLFLARAVGEKGLVE-SYEARPHHLAQAERNVRAFWQVE-NVRFHLGKLEEAELEEAAYDGVALD 173 (258)
T ss_dssp TCEEEEECCTT-SHHHHHHHHHHCTTSEEE-EEESCHHHHHHHHHHHHHHCCCC-CEEEEESCGGGCCCCTTCEEEEEEE
T ss_pred CCEEEEECCCc-CHHHHHHHHHhCCCCEEE-EEeCCHHHHHHHHHHHHHhcCCC-CEEEEECchhhcCCCCCCcCEEEEC
Confidence 45899999997 6544444444 3466766 5788887666554432 421 122 24566666 555579999986
Q ss_pred CCCc-ccHHHHHHHHHcCCeEEE
Q 018020 81 LPTS-MHVKWAISVAQKKKHLLM 102 (362)
Q Consensus 81 ~~~~-~h~~~~~~al~~gk~V~~ 102 (362)
.|.. .-...+.++|+.|-.+++
T Consensus 174 ~~~~~~~l~~~~~~L~~gG~l~~ 196 (258)
T 2pwy_A 174 LMEPWKVLEKAALALKPDRFLVA 196 (258)
T ss_dssp SSCGGGGHHHHHHHEEEEEEEEE
T ss_pred CcCHHHHHHHHHHhCCCCCEEEE
Confidence 5544 334444555555544444
No 456
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.57 E-value=0.055 Score=50.60 Aligned_cols=110 Identities=18% Similarity=0.147 Sum_probs=66.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC----------CHHHHHHHHHHcCC--C---CCC---cccCCHHHHh
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR----------SLEKATNFAKANNF--P---PDA---KVYGSYEALL 69 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~----------~~~~~~~~~~~~~~--~---~~~---~~~~~~~e~l 69 (362)
..+|+|.|+|.+|...+..+.+. +.+||++.|. +.+.+.++.++.+. - ++. ..+.+.++++
T Consensus 210 gk~vaVqG~GnVG~~aa~~L~e~-GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~ 288 (421)
T 1v9l_A 210 GKTVAIQGMGNVGRWTAYWLEKM-GAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIF 288 (421)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhhh
Confidence 47899999999999888888776 8999999998 56666655443321 0 000 1232446777
Q ss_pred cCCCCcEEEEcC-CCcccHHHHHHHHHcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 70 DDKDIDAVYLPL-PTSMHVKWAISVAQKKKHLLMEK---PMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 70 ~~~~~D~V~i~~-~~~~h~~~~~~al~~gk~V~~EK---P~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
.. ++|+.+-|. ++..+.+-+... +..+++|= |+ + .++.+ ..+++|+.+.
T Consensus 289 ~~-~~Dil~P~A~~~~I~~~~a~~l---~ak~V~EgAN~p~--t-~~a~~---~l~~~Gi~~~ 341 (421)
T 1v9l_A 289 KL-DVDIFVPAAIENVIRGDNAGLV---KARLVVEGANGPT--T-PEAER---ILYERGVVVV 341 (421)
T ss_dssp GC-CCSEEEECSCSSCBCTTTTTTC---CCSEEECCSSSCB--C-HHHHH---HHHTTTCEEE
T ss_pred cC-CccEEEecCcCCccchhhHHHc---CceEEEecCCCcC--C-HHHHH---HHHHCCCEEe
Confidence 74 799998754 444443333222 55677774 42 2 33333 3455566554
No 457
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.47 E-value=0.34 Score=43.93 Aligned_cols=90 Identities=12% Similarity=0.095 Sum_probs=57.6
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc---CCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD---DKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~---~~~~D~V~i~~ 81 (362)
-+|.|+|+ |.+|...+..++.. +++++ ++++++++.+.+.+++|... +.-+ +++.+.+. ...+|+|+.++
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~-~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMM-GCYVV-GSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT-TCEEE-EEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 47899997 99999988888877 67766 46688887776655677421 0011 23444332 23699999988
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
.. ...+.+..+++.| +-|++
T Consensus 234 g~-~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 234 GG-KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp CH-HHHHHHHTTEEEEEEEEEC
T ss_pred CH-HHHHHHHHHHhcCCEEEEE
Confidence 76 3455555566555 43443
No 458
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.47 E-value=0.09 Score=46.64 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=49.8
Q ss_pred eeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc----CCCCCCcccCC---HHHHhcCCCCcEEEE
Q 018020 8 AIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN----NFPPDAKVYGS---YEALLDDKDIDAVYL 79 (362)
Q Consensus 8 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~----~~~~~~~~~~~---~~e~l~~~~~D~V~i 79 (362)
..++.|+| +|.+|...+..+.+. +.+ +.+++|+.++++++++++ ++..-..-.++ ++++++ ++|+|+.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~-G~~-V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn 194 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGE-GAE-VVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK--GAHFVFT 194 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT-TCE-EEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT--TCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-cCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH--hCCEEEE
Confidence 35789999 899999999998877 677 558899998888776654 22100001223 345555 4899999
Q ss_pred cCCC
Q 018020 80 PLPT 83 (362)
Q Consensus 80 ~~~~ 83 (362)
+++.
T Consensus 195 ~ag~ 198 (287)
T 1lu9_A 195 AGAI 198 (287)
T ss_dssp CCCT
T ss_pred CCCc
Confidence 9975
No 459
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.32 E-value=0.32 Score=42.96 Aligned_cols=71 Identities=13% Similarity=0.087 Sum_probs=43.2
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHH--HHHHHHcCCC---CCCcccCCHHHHhcCCCCcEEEEcC
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKA--TNFAKANNFP---PDAKVYGSYEALLDDKDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~--~~~~~~~~~~---~~~~~~~~~~e~l~~~~~D~V~i~~ 81 (362)
+++|.|+|+ |.+|...++.|.+.++.+|+++ +|++++. +.+.. .++. -+..-.++++++++ ++|+|+.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~-~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVV-TRNPRKKAAKELRL-QGAEVVQGDQDDQVIMELALN--GAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEE-ESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHHHHT--TCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEE-EcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHHHHh--cCCEEEEeC
Confidence 468999997 9999999998877644787765 4554432 22222 2321 00011123444555 499999877
Q ss_pred C
Q 018020 82 P 82 (362)
Q Consensus 82 ~ 82 (362)
.
T Consensus 81 ~ 81 (299)
T 2wm3_A 81 N 81 (299)
T ss_dssp C
T ss_pred C
Confidence 5
No 460
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.31 E-value=0.16 Score=46.05 Aligned_cols=88 Identities=13% Similarity=0.013 Sum_probs=54.3
Q ss_pred eEEEEEecc-HHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHH----hcCCCCcEEEE
Q 018020 9 IRFGIIGAA-DIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEAL----LDDKDIDAVYL 79 (362)
Q Consensus 9 ~~v~iiG~G-~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~----l~~~~~D~V~i 79 (362)
-+|.|+|+| .+|...+..++.. +++++++ ++++++.+. ++++|.. .++ .++.+. .....+|+|+.
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~-~~~~~~~~~-~~~lga~---~~~~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQIL-NFRLIAV-TRNNKHTEE-LLRLGAA---YVIDTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH-TCEEEEE-ESSSTTHHH-HHHHTCS---EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHc-CCEEEEE-eCCHHHHHH-HHhCCCc---EEEeCCcccHHHHHHHHhCCCCCcEEEE
Confidence 478999997 7898888877766 6787755 556565554 3456642 111 233332 22347999999
Q ss_pred cCCCcccHHHHHHHHHcC-CeEEEe
Q 018020 80 PLPTSMHVKWAISVAQKK-KHLLME 103 (362)
Q Consensus 80 ~~~~~~h~~~~~~al~~g-k~V~~E 103 (362)
++....-...+ .+++.| +-|++-
T Consensus 220 ~~g~~~~~~~~-~~l~~~G~iv~~G 243 (340)
T 3gms_A 220 SIGGPDGNELA-FSLRPNGHFLTIG 243 (340)
T ss_dssp SSCHHHHHHHH-HTEEEEEEEEECC
T ss_pred CCCChhHHHHH-HHhcCCCEEEEEe
Confidence 88876544444 566555 445543
No 461
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.29 E-value=0.33 Score=43.67 Aligned_cols=89 Identities=16% Similarity=-0.009 Sum_probs=57.0
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHH----hcCCCCcEEEEcC
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEAL----LDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~----l~~~~~D~V~i~~ 81 (362)
-+|.|+| +|.+|...+..++.. +++++++ ++++++.+.+ +++|... +.-+ .++.+. .....+|+|+.++
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~-~~~~~~~~~~-~~~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKAL-GAKLIGT-VSSPEKAAHA-KALGAWE-TIDYSHEDVAKRVLELTDGKKCPVVYDGV 217 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH-TCEEEEE-ESSHHHHHHH-HHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCEEEEE-eCCHHHHHHH-HHcCCCE-EEeCCCccHHHHHHHHhCCCCceEEEECC
Confidence 4789999 799999888888766 6787754 5677776644 5666420 0011 223222 2234799999998
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
.. ...+.+..+++.| +-|++
T Consensus 218 g~-~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 218 GQ-DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp CG-GGHHHHHTTEEEEEEEEEC
T ss_pred Ch-HHHHHHHHHhcCCCEEEEE
Confidence 87 5566667777665 44444
No 462
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.23 E-value=0.19 Score=44.55 Aligned_cols=86 Identities=16% Similarity=0.095 Sum_probs=48.7
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCH-------HHHHHHHH--HcCCC---CCCcccCCHHHHhcCCCC
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSL-------EKATNFAK--ANNFP---PDAKVYGSYEALLDDKDI 74 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~-------~~~~~~~~--~~~~~---~~~~~~~~~~e~l~~~~~ 74 (362)
+++|.|+|+ |.+|...+..|.+. +.+|++ .+|++ ++++.+.. ..++. -+..-.+++.++++ ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~ 77 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-GNPTYA-LVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK--QV 77 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-TCCEEE-EECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TC
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-CCcEEE-EECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CC
Confidence 357999996 99999999988776 467665 45654 44443321 22321 00011123444555 59
Q ss_pred cEEEEcCCCc---ccHHHHHHHHHcC
Q 018020 75 DAVYLPLPTS---MHVKWAISVAQKK 97 (362)
Q Consensus 75 D~V~i~~~~~---~h~~~~~~al~~g 97 (362)
|+|+.+.... ....++..|.++|
T Consensus 78 d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 78 DIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp SEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred CEEEECCcccccccHHHHHHHHHhcC
Confidence 9999877643 2333444444444
No 463
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.18 E-value=0.24 Score=46.07 Aligned_cols=87 Identities=13% Similarity=0.127 Sum_probs=56.2
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCcccC--C--HHHHh---cCCCCcEEEEc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVYG--S--YEALL---DDKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~--~--~~e~l---~~~~~D~V~i~ 80 (362)
-+|.|+|+|.+|...++.++.. ++ +|+ +.++++++.+ +++++|.. +..+. + .+++. ....+|+|+.+
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi-~~~~~~~~~~-~a~~lGa~--~i~~~~~~~~~~~~~~~~~g~g~Dvvid~ 261 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLL-GAACVI-VGDQNPERLK-LLSDAGFE--TIDLRNSAPLRDQIDQILGKPEVDCGVDA 261 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEE-EEESCHHHHH-HHHTTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEE-EEcCCHHHHH-HHHHcCCc--EEcCCCcchHHHHHHHHhCCCCCCEEEEC
Confidence 4799999999999888887766 56 666 4567777665 45677742 11122 2 22232 22369999999
Q ss_pred CCCcc--------------cHHHHHHHHHcCCeE
Q 018020 81 LPTSM--------------HVKWAISVAQKKKHL 100 (362)
Q Consensus 81 ~~~~~--------------h~~~~~~al~~gk~V 100 (362)
+.... ..+.+.++++.|-.+
T Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~i 295 (398)
T 2dph_A 262 VGFEAHGLGDEANTETPNGALNSLFDVVRAGGAI 295 (398)
T ss_dssp SCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEE
T ss_pred CCCccccccccccccccHHHHHHHHHHHhcCCEE
Confidence 88653 356666777666443
No 464
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=93.16 E-value=0.18 Score=45.38 Aligned_cols=72 Identities=17% Similarity=0.125 Sum_probs=51.6
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-CH----------HHHHHHHHHcCCCCCCcccCC-----HHHHhcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-SL----------EKATNFAKANNFPPDAKVYGS-----YEALLDD 71 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-~~----------~~~~~~~~~~~~~~~~~~~~~-----~~e~l~~ 71 (362)
+|||.++|+...+...+..|.+. +.+|++|+.. +. ...+.+|.++|+| +.-..+ +.+.|..
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~-~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIp--v~~~~~~~~~~~~~~l~~ 78 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS-SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIP--IIQPFSLRDEVEQEKLIA 78 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS-SSEEEEEECCCC----------CCHHHHHHHHTTCC--EECCSCSSSHHHHHHHHT
T ss_pred CcEEEEECCCHHHHHHHHHHHHC-CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCC--EECcccCCCHHHHHHHHh
Confidence 58999999999999888888765 6899999862 22 1245789999997 111122 2345667
Q ss_pred CCCcEEEEcCC
Q 018020 72 KDIDAVYLPLP 82 (362)
Q Consensus 72 ~~~D~V~i~~~ 82 (362)
.++|+++++.-
T Consensus 79 ~~~Dliv~~~~ 89 (314)
T 3tqq_A 79 MNADVMVVVAY 89 (314)
T ss_dssp TCCSEEEEESC
T ss_pred cCCCEEEEcCc
Confidence 78999998743
No 465
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.06 E-value=0.12 Score=47.58 Aligned_cols=87 Identities=10% Similarity=0.085 Sum_probs=55.5
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH---HHHHHHHHHcCCCCCCcccC--CH-HHHhc-CCCCcEEEEcC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL---EKATNFAKANNFPPDAKVYG--SY-EALLD-DKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~---~~~~~~~~~~~~~~~~~~~~--~~-~e~l~-~~~~D~V~i~~ 81 (362)
-+|.|+|+|.+|...++.++.. +++++++ ++++ ++. ++++++|.. ..+ ++ +++.+ ...+|+|+.++
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~-~~~~~~ga~----~v~~~~~~~~~~~~~~~~d~vid~~ 254 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTY-GLEVWMA-NRREPTEVEQ-TVIEETKTN----YYNSSNGYDKLKDSVGKFDVIIDAT 254 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHH-TCEEEEE-ESSCCCHHHH-HHHHHHTCE----EEECTTCSHHHHHHHCCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEE-eCCccchHHH-HHHHHhCCc----eechHHHHHHHHHhCCCCCEEEECC
Confidence 4799999999999888888766 6777754 5555 555 445667742 111 11 22221 14699999999
Q ss_pred CCcccH-HHHHHHHHcC-CeEEE
Q 018020 82 PTSMHV-KWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~-~~~~~al~~g-k~V~~ 102 (362)
...... +.+..+++.| +-|++
T Consensus 255 g~~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 255 GADVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp CCCTHHHHHHGGGEEEEEEEEEC
T ss_pred CChHHHHHHHHHHHhcCCEEEEE
Confidence 876555 5666666554 43444
No 466
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=92.98 E-value=0.15 Score=43.21 Aligned_cols=90 Identities=19% Similarity=0.234 Sum_probs=51.8
Q ss_pred ceeEEEEEec--cHHHHHHHHHHhcCC-CcEEEEEEcCCH-HHHHHHHHHcCCCCC---CcccC--CHHHHhcCCCCcEE
Q 018020 7 AAIRFGIIGA--ADIARKLSRAITLAP-NAVLSAVASRSL-EKATNFAKANNFPPD---AKVYG--SYEALLDDKDIDAV 77 (362)
Q Consensus 7 ~~~~v~iiG~--G~~g~~~~~~~~~~~-~~~vv~v~d~~~-~~~~~~~~~~~~~~~---~~~~~--~~~e~l~~~~~D~V 77 (362)
.++||+|+-. |+-....+..++.-. .++|++|+...+ ....+.|+++|+|-- .+-+. .+.+.|+..++|++
T Consensus 7 ~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dli 86 (215)
T 3kcq_A 7 KELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLDIEHISTVLREHDVDLV 86 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEE
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCChHHHHHHHHHhCCCEE
Confidence 3566666554 444445555554321 379999887433 335567899999710 00111 23345666789999
Q ss_pred EEcCCCcccHHHHHHHHHc
Q 018020 78 YLPLPTSMHVKWAISVAQK 96 (362)
Q Consensus 78 ~i~~~~~~h~~~~~~al~~ 96 (362)
+++.-..--.+-+....+.
T Consensus 87 vlagy~~IL~~~~l~~~~~ 105 (215)
T 3kcq_A 87 CLAGFMSILPEKFVTDWHH 105 (215)
T ss_dssp EESSCCSCCCHHHHHHTTT
T ss_pred EEeCCceEeCHHHHhhccC
Confidence 9987665444444444443
No 467
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.97 E-value=0.55 Score=42.79 Aligned_cols=89 Identities=11% Similarity=0.090 Sum_probs=55.6
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccC--CHH-HH---hcCCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYG--SYE-AL---LDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~-e~---l~~~~~D~V~i~~ 81 (362)
-+|.|+|+ |.+|...+..++.. +++++ ++++++++.+ .++++|... +.-+. ++. ++ .....+|+|+.++
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~-Ga~Vi-~~~~~~~~~~-~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAY-GLKIL-GTAGTEEGQK-IVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEE-EEESSHHHHH-HHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEE-EEeCChhHHH-HHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 47999998 99999988888876 67866 4567777776 456676420 00111 222 22 2233699999988
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
... ..+.+..+++.| +-|++
T Consensus 248 G~~-~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 248 ANV-NLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp HHH-HHHHHHHHEEEEEEEEEC
T ss_pred ChH-HHHHHHHhccCCCEEEEE
Confidence 753 344555666554 44444
No 468
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.89 E-value=0.16 Score=46.08 Aligned_cols=106 Identities=12% Similarity=0.077 Sum_probs=66.2
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc--CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD--DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~--~~~~D~V~i~~~ 82 (362)
+.+|.|+|+|..|...++.+.+. +. ++ ++|+++++.+ +. +.+.+ .++ ++.+.+.+ -.+.|+|+++++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~-g~-v~-vid~~~~~~~-~~-~~~~~---~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGS-EV-FV-LAEDENVRKK-VL-RSGAN---FVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGS-CE-EE-EESCGGGHHH-HH-HTTCE---EEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhC-Cc-EE-EEeCChhhhh-HH-hCCcE---EEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 34799999999999999988776 45 44 7799999888 54 45543 222 33443322 257899999999
Q ss_pred CcccHHHHHHHHH-cC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 83 TSMHVKWAISVAQ-KK--KHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 83 ~~~h~~~~~~al~-~g--k~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
++...-.+...++ .+ .+|++. +.+.+..+.+ ++.|....
T Consensus 187 ~d~~n~~~~~~ar~~~~~~~iiar---~~~~~~~~~l----~~~G~d~v 228 (336)
T 1lnq_A 187 SDSETIHCILGIRKIDESVRIIAE---AERYENIEQL----RMAGADQV 228 (336)
T ss_dssp SHHHHHHHHHHHHTTCTTSEEEEE---CSSGGGHHHH----HHTTCSEE
T ss_pred ccHHHHHHHHHHHHHCCCCeEEEE---ECCHHHHHHH----HHcCCCEE
Confidence 8755444444444 34 367664 3344444333 35665544
No 469
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=92.77 E-value=0.2 Score=45.65 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=51.1
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHh---cCCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALL---DDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l---~~~~~D~V~i~~ 81 (362)
-+|.|+|+ |.+|...++.++......++++++ .++.+.+ + +|.. .++ .++.+-+ ....+|+|+-++
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~--~~~~~~~-~-~ga~---~~~~~~~~~~~~~~~~~~~g~Dvv~d~~ 216 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS--TFKHEAI-K-DSVT---HLFDRNADYVQEVKRISAEGVDIVLDCL 216 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC--GGGHHHH-G-GGSS---EEEETTSCHHHHHHHHCTTCEEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC--HHHHHHH-H-cCCc---EEEcCCccHHHHHHHhcCCCceEEEECC
Confidence 47999999 899998888888776688887763 3444433 3 5542 122 2333322 224799999988
Q ss_pred CCcccHHHHHHHHHcC-CeEEEe
Q 018020 82 PTSMHVKWAISVAQKK-KHLLME 103 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~E 103 (362)
....- +.+..+++.| +-|++-
T Consensus 217 g~~~~-~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 217 CGDNT-GKGLSLLKPLGTYILYG 238 (349)
T ss_dssp C--------CTTEEEEEEEEEEC
T ss_pred CchhH-HHHHHHhhcCCEEEEEC
Confidence 76543 5555666655 555554
No 470
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=92.77 E-value=1.2 Score=35.16 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=61.2
Q ss_pred ceeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc------CC----HHHHhcCCCCc
Q 018020 7 AAIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY------GS----YEALLDDKDID 75 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~------~~----~~e~l~~~~~D 75 (362)
+++||.||.-...-.. ....+...+++.++..++...+..+.+.+. . +++.+. .+ ++.+-+....-
T Consensus 24 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~-~--~dlvilD~~l~~~~g~~l~~~lr~~~~~~ 100 (164)
T 3t8y_A 24 RVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAIEL-K--PDVITMDIEMPNLNGIEALKLIMKKAPTR 100 (164)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHH-C--CSEEEECSSCSSSCHHHHHHHHHHHSCCE
T ss_pred CccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhccC-C--CCEEEEeCCCCCCCHHHHHHHHHhcCCce
Confidence 5789999998775444 444566666777777776555544444333 2 111111 11 22222222355
Q ss_pred EEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCC
Q 018020 76 AVYLPLPTSMHVKWAISVAQKKKHLLMEKPMAL 108 (362)
Q Consensus 76 ~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~ 108 (362)
+|++.+......+.+..++++|..=++.||+..
T Consensus 101 ii~~s~~~~~~~~~~~~~~~~ga~~~l~KP~~~ 133 (164)
T 3t8y_A 101 VIMVSSLTEEGAAITIEALRNGAVDFITKPHGS 133 (164)
T ss_dssp EEEEESSCCTTCHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEEecCCccchHHHHHHHHcCcCEEEeCCCCH
Confidence 666666666666778899999999899999864
No 471
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.71 E-value=0.33 Score=44.37 Aligned_cols=89 Identities=10% Similarity=-0.033 Sum_probs=55.0
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHH--HHHHHHHHcCCCCCCcccC-------CHHH-Hh-----cCC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLE--KATNFAKANNFPPDAKVYG-------SYEA-LL-----DDK 72 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~--~~~~~~~~~~~~~~~~~~~-------~~~e-~l-----~~~ 72 (362)
-+|.|+|+ |.+|...++.++.. +++++++++.... +...+++++|.. .+++ ++.+ +. ...
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~t~~~~~ 244 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWIKQSGG 244 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred cEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHHhhccCC
Confidence 47899998 99999888887766 7888888743322 233445677743 2221 2222 22 224
Q ss_pred CCcEEEEcCCCcccHHHHHHHHHcC-CeEEE
Q 018020 73 DIDAVYLPLPTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 73 ~~D~V~i~~~~~~h~~~~~~al~~g-k~V~~ 102 (362)
.+|+|+-++....-. .+..+++.| +-|++
T Consensus 245 g~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 245 EAKLALNCVGGKSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp CEEEEEESSCHHHHH-HHHHTSCTTCEEEEC
T ss_pred CceEEEECCCchhHH-HHHHHhccCCEEEEe
Confidence 699999998865444 455666665 44444
No 472
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.70 E-value=0.58 Score=42.04 Aligned_cols=89 Identities=13% Similarity=0.066 Sum_probs=56.3
Q ss_pred eEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHH-HH---hcCCCCcEEEEcC
Q 018020 9 IRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYE-AL---LDDKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~-e~---l~~~~~D~V~i~~ 81 (362)
-+|.|+| +|.+|...+..++.. ++++++ +++++++.+.+. ++|... +.-+ .++. ++ .....+|+|+.++
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~-~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKAL-GAKLIG-TVGTAQKAQSAL-KAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHH-TCEEEE-EESSHHHHHHHH-HHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCEEEE-EeCCHHHHHHHH-HcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 4789999 699999888888776 677664 567877766554 455320 0011 1222 22 2234699999998
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
. ....+.+..+++.| +-|++
T Consensus 218 g-~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 218 G-RDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp C-GGGHHHHHHTEEEEEEEEEC
T ss_pred c-hHHHHHHHHHhcCCCEEEEE
Confidence 8 55666677777665 43444
No 473
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=92.69 E-value=0.16 Score=45.74 Aligned_cols=74 Identities=12% Similarity=0.069 Sum_probs=52.2
Q ss_pred CceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCC-----------HHHHHHHHHHcCCCCCCcccCCH---H--HHh
Q 018020 6 QAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRS-----------LEKATNFAKANNFPPDAKVYGSY---E--ALL 69 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~-----------~~~~~~~~~~~~~~~~~~~~~~~---~--e~l 69 (362)
.++|||.++|+...+...+..|.+. +++|++|+... +...+.+|.++|+| +....++ + +.|
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~-~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIp--v~~~~~~~~~~~~~~l 78 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED-GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIP--VLQPLRIREKDEYEKV 78 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCC--EECCSCTTSHHHHHHH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC-CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCC--EEccccCCCHHHHHHH
Confidence 4679999999999998888888766 58999998631 12367889999997 1111122 2 335
Q ss_pred cCCCCcEEEEcCC
Q 018020 70 DDKDIDAVYLPLP 82 (362)
Q Consensus 70 ~~~~~D~V~i~~~ 82 (362)
...++|+++++.-
T Consensus 79 ~~~~~Dliv~~~y 91 (317)
T 3rfo_A 79 LALEPDLIVTAAF 91 (317)
T ss_dssp HHHCCSEEEESSC
T ss_pred HhcCCCEEEEcCc
Confidence 4567999998744
No 474
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.67 E-value=0.26 Score=47.70 Aligned_cols=87 Identities=8% Similarity=0.001 Sum_probs=58.5
Q ss_pred eeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCH--HHHHHHHHHcCCCCCCccc--CCHHHHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSL--EKATNFAKANNFPPDAKVY--GSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~--~~~~~~~~~~~~~~~~~~~--~~~~e~l~~~~~D~V~i~~~ 82 (362)
..||-+||.|..|.. .+..|++. +++|. ++|... ...+.+ ++.|++ ++ .+.+.+.. ++|+|+++.-
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~-G~~V~-~sD~~~~~~~~~~L-~~~gi~----~~~G~~~~~~~~--~~d~vV~Spg 89 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARAL-GHTVT-GSDANIYPPMSTQL-EQAGVT----IEEGYLIAHLQP--APDLVVVGNA 89 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEE-EEESCCCTTHHHHH-HHTTCE----EEESCCGGGGCS--CCSEEEECTT
T ss_pred CCEEEEEEecHhhHHHHHHHHHhC-CCEEE-EECCCCCcHHHHHH-HHCCCE----EECCCCHHHcCC--CCCEEEECCC
Confidence 468999999999885 56667766 78866 677642 233344 345653 33 33444433 4899998765
Q ss_pred CcccHHHHHHHHHcCCeEEEe
Q 018020 83 TSMHVKWAISVAQKKKHLLME 103 (362)
Q Consensus 83 ~~~h~~~~~~al~~gk~V~~E 103 (362)
-+...+.+.+|.++|.+|+.|
T Consensus 90 i~~~~p~l~~a~~~gi~v~~~ 110 (524)
T 3hn7_A 90 MKRGMDVIEYMLDTGLRYTSG 110 (524)
T ss_dssp CCTTSHHHHHHHHHTCCEEEH
T ss_pred cCCCCHHHHHHHHCCCcEEEH
Confidence 555566678899999999976
No 475
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=92.60 E-value=1.5 Score=33.08 Aligned_cols=110 Identities=7% Similarity=0.014 Sum_probs=61.8
Q ss_pred CceeEEEEEeccHHHHHH-HHHHhcCCCcEEEEEEcCCHHHHHHHHHH-cC-------CCCCCcccCCHHHHhcCCCCcE
Q 018020 6 QAAIRFGIIGAADIARKL-SRAITLAPNAVLSAVASRSLEKATNFAKA-NN-------FPPDAKVYGSYEALLDDKDIDA 76 (362)
Q Consensus 6 ~~~~~v~iiG~G~~g~~~-~~~~~~~~~~~vv~v~d~~~~~~~~~~~~-~~-------~~~~~~~~~~~~e~l~~~~~D~ 76 (362)
+.++||.||.-...-... ...+... +++++..++...+..+.+.+. +. .+.+....+-++.+-+.+.+-+
T Consensus 7 ~~~~~iLivdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~i 85 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLAAATLRIQLESL-GYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPI 85 (140)
T ss_dssp -CCCEEEEECCBHHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCE
T ss_pred CCCceEEEEECCHHHHHHHHHHHHHC-CCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCE
Confidence 357899999987754443 4445443 788886666555544444432 11 1000011111122222245666
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHH
Q 018020 77 VYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNAC 120 (362)
Q Consensus 77 V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a 120 (362)
|+++.... ......+++.|..-++.||+ +.++..+.++.+
T Consensus 86 i~ls~~~~--~~~~~~~~~~g~~~~l~kp~--~~~~l~~~i~~~ 125 (140)
T 3cg0_A 86 IFITSSQD--VETFQRAKRVNPFGYLAKPV--AADTLHRSIEMA 125 (140)
T ss_dssp EEEECCCC--HHHHHHHHTTCCSEEEEESC--CHHHHHHHHHHH
T ss_pred EEEecCCC--HHHHHHHHhcCCCEEEeCCC--CHHHHHHHHHHH
Confidence 66655443 56778899999888999996 556665555544
No 476
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=92.59 E-value=0.58 Score=42.62 Aligned_cols=119 Identities=8% Similarity=0.061 Sum_probs=60.9
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCC----CcccCCHHHHhcC--CCCcEEEEcC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPD----AKVYGSYEALLDD--KDIDAVYLPL 81 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~----~~~~~~~~e~l~~--~~~D~V~i~~ 81 (362)
..||.|||+|..|...+..|... ++.=+.++|.+.-....+.+++-.... .+ .....+.|.. +.+++..+..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~K-a~~~~~~l~~lnp~v~v~~~~~ 113 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNR-AEASLERAQNLNPMVDVKVDTE 113 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBH-HHHHHHHHHHTCTTSEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCCcchhhCCCCCccccccCcCCH-HHHHHHHHHhHCCCeEEEEEec
Confidence 56899999999999999998766 554455777643111111111100000 01 0111111221 2333333322
Q ss_pred CCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeecc
Q 018020 82 PTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWV 134 (362)
Q Consensus 82 ~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~r 134 (362)
.-... ....+ .+-.|++. ...+.+.-..|.+.|+++++++..+....
T Consensus 114 ~~~~~---~~~~~-~~~dvVv~--~~d~~~~r~~ln~~~~~~~ip~i~~~~~G 160 (346)
T 1y8q_A 114 DIEKK---PESFF-TQFDAVCL--TCCSRDVIVKVDQICHKNSIKFFTGDVFG 160 (346)
T ss_dssp CGGGC---CHHHH-TTCSEEEE--ESCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred ccCcc---hHHHh-cCCCEEEE--cCCCHHHHHHHHHHHHHcCCCEEEEeecc
Confidence 21110 11222 34455554 24567777788888999999888765443
No 477
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=92.53 E-value=3.3 Score=34.45 Aligned_cols=111 Identities=15% Similarity=0.151 Sum_probs=62.0
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHH---HcCCCCCCc-ccCCHHHH---hcCCCCcEEEEc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAK---ANNFPPDAK-VYGSYEAL---LDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~---~~~~~~~~~-~~~~~~e~---l~~~~~D~V~i~ 80 (362)
.-+|.=||||. |.......+..|+.+++| +|.+++..+...+ +.+++ ++. +..|+.++ +.+..+|.|++.
T Consensus 39 ~~~vLDiGcG~-G~~~~~la~~~p~~~v~g-iD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 39 NPIHIEVGTGK-GQFISGMAKQNPDINYIG-IELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CCEEEEECCTT-SHHHHHHHHHCTTSEEEE-ECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CceEEEEecCC-CHHHHHHHHHCCCCCEEE-EEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 45688899997 655555555678888775 6888876554433 34442 122 23455443 555679999886
Q ss_pred CCCcc----c----------HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 018020 81 LPTSM----H----------VKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENG 124 (362)
Q Consensus 81 ~~~~~----h----------~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~ 124 (362)
-|.+. | ...+.+.|+.|-.+++.- .+...+..+.+..++.|
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t---d~~~~~~~~~~~~~~~g 170 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT---DNRGLFEYSLKSFSEYG 170 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE---SCHHHHHHHHHHHHHHT
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe---CCHHHHHHHHHHHHHCC
Confidence 55431 1 233344555555555432 23444444555555544
No 478
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.44 E-value=0.11 Score=46.38 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=63.3
Q ss_pred eeEEEEEe-ccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCC---CCCcccCCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIG-AADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFP---PDAKVYGSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~e~l~~~~~D~V~i~~~~ 83 (362)
++||.|.| +|++|...+..|.+. +.+|+++. |++.... +. ++. -+.. .++++++++ ++|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~-~~---~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND-GNTPIILT-RSIGNKA-IN---DYEYRVSDYT-LEDLINQLN--DVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-SCCC---------CCEEEECCCC-HHHHHHHTT--TCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC-CCEEEEEe-CCCCccc-CC---ceEEEEcccc-HHHHHHhhc--CCCEEEEcccc
Confidence 36899999 599999999999877 67877554 5533332 22 221 1222 344556666 69999976554
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCE--EEEeeeccc
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQ--LMDGTMWVH 135 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~--~~v~~~~r~ 135 (362)
.... --++-+..++.....++++|++.++. +++....-|
T Consensus 73 ~~~~-------------~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vy 113 (311)
T 3m2p_A 73 RGSQ-------------GKISEFHDNEILTQNLYDACYENNISNIVYASTISAY 113 (311)
T ss_dssp CCSS-------------SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGC
T ss_pred CCCC-------------ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHh
Confidence 3221 01122344677788999999988764 344443333
No 479
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.43 E-value=0.66 Score=41.29 Aligned_cols=90 Identities=17% Similarity=0.147 Sum_probs=54.4
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCH------HHHHHHHH--HcCCC---CCCcccCCHHHHhcCCCCc
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSL------EKATNFAK--ANNFP---PDAKVYGSYEALLDDKDID 75 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~------~~~~~~~~--~~~~~---~~~~~~~~~~e~l~~~~~D 75 (362)
+++|.|+|+ |.+|...++.|.+. +.+|+++ +|++ ++.+.+.. ..++. -+..-.+++.++++ ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d 79 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF-SHPTFIY-ARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVD 79 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEE-ECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCS
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC-CCcEEEE-ECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCC
Confidence 467999996 99999999998876 5777754 4543 34433321 22321 00011123445565 499
Q ss_pred EEEEcCCC---cccHHHHHHHHHcC--CeEE
Q 018020 76 AVYLPLPT---SMHVKWAISVAQKK--KHLL 101 (362)
Q Consensus 76 ~V~i~~~~---~~h~~~~~~al~~g--k~V~ 101 (362)
+|+.+... .....++..|.++| ++++
T Consensus 80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 80 IVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 99987764 34566667777777 4554
No 480
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=92.42 E-value=0.87 Score=41.24 Aligned_cols=74 Identities=20% Similarity=0.181 Sum_probs=48.1
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCC------CCCcccCCHHHHhcCCCCcEEE
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFP------PDAKVYGSYEALLDDKDIDAVY 78 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~------~~~~~~~~~~e~l~~~~~D~V~ 78 (362)
+.++|.|.|+ |++|...++.|.+.++. +|+ ++++++.+...+.+++.-+ -++.-.++++++++ ++|+|+
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~-~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~D~Vi 96 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKII-VYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE--GVDICI 96 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEE-EEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT--TCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEE-EEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh--cCCEEE
Confidence 4578999995 89999999988776454 766 5678888777766654211 01111123344555 599999
Q ss_pred EcCCC
Q 018020 79 LPLPT 83 (362)
Q Consensus 79 i~~~~ 83 (362)
-+...
T Consensus 97 h~Aa~ 101 (344)
T 2gn4_A 97 HAAAL 101 (344)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 76643
No 481
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=92.42 E-value=0.42 Score=46.26 Aligned_cols=35 Identities=9% Similarity=0.127 Sum_probs=28.4
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCH
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSL 43 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~ 43 (362)
..||.|||+|..|...+..|... ++.=+.++|.+.
T Consensus 32 ~~~VlvvG~GGlGseiak~La~a-GVg~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLP-GIGSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTT-TCSEEEEECCCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHc-CCCeEEEEeCCE
Confidence 57999999999999999999866 665566888653
No 482
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.39 E-value=0.42 Score=43.93 Aligned_cols=85 Identities=13% Similarity=0.077 Sum_probs=57.7
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhc---CCCCcEEEEc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLD---DKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~---~~~~D~V~i~ 80 (362)
-+|.|+|+|.+|...++.++.. ++ +|+ +.++++++.+. ++++|... +.-+ +++.+.+. ...+|+|+.+
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi-~~~~~~~~~~~-~~~lGa~~-vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAA-GAARII-GVDINKDKFAK-AKEVGATE-CVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEE-EECSCGGGHHH-HHHTTCSE-EECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEE-EEcCCHHHHHH-HHHhCCce-EecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 4799999999999888888877 66 665 45677776654 46777531 1111 23444332 1369999999
Q ss_pred CCCcccHHHHHHHHHcC
Q 018020 81 LPTSMHVKWAISVAQKK 97 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~g 97 (362)
+......+.+.++++.|
T Consensus 269 ~g~~~~~~~~~~~l~~~ 285 (374)
T 2jhf_A 269 IGRLDTMVTALSCCQEA 285 (374)
T ss_dssp SCCHHHHHHHHHHBCTT
T ss_pred CCCHHHHHHHHHHhhcC
Confidence 98866777777888765
No 483
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.36 E-value=0.44 Score=43.30 Aligned_cols=134 Identities=8% Similarity=0.003 Sum_probs=74.2
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcc--cCCHHHHhcC---CCCcEEEEcCC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKV--YGSYEALLDD---KDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~--~~~~~e~l~~---~~~D~V~i~~~ 82 (362)
-+|.|+|+ |.+|...+..++.. ++++++ +++++++.+ .++++|...-... ..++.+.+.. ..+|+|+.++.
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~-~~~~~~~~~-~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 247 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAM-GYRVLG-IDGGEGKEE-LFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV 247 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEE-EECSTTHHH-HHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCcEEE-EcCCHHHHH-HHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence 47999999 88999888888876 678775 556666664 4556664210001 1244444321 26999999988
Q ss_pred CcccHHHHHHHHHcC-CeEEEeCCC----CCCHHHHHHHHHHHHHcCCEEEEeeecccChhHHHHHHhhcCCCCccc
Q 018020 83 TSMHVKWAISVAQKK-KHLLMEKPM----ALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQ 154 (362)
Q Consensus 83 ~~~h~~~~~~al~~g-k~V~~EKP~----~~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~~g~iG~ 154 (362)
.....+.+..+++.| +-|++--+- ..+.. .+ . .+++.+. ++.......+.++-+++ ++|.+-.
T Consensus 248 ~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~---~~---~-~~~~~i~-g~~~~~~~~~~~~~~l~-~~g~l~~ 315 (347)
T 2hcy_A 248 SEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVF---NQ---V-VKSISIV-GSYVGNRADTREALDFF-ARGLVKS 315 (347)
T ss_dssp CHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHH---HH---H-HTTCEEE-ECCCCCHHHHHHHHHHH-HTTSCCC
T ss_pred cHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHH---HH---h-hCCcEEE-EccCCCHHHHHHHHHHH-HhCCCcc
Confidence 655555555566554 334432221 11221 11 1 2344443 32222224566777777 6676643
No 484
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=92.32 E-value=0.042 Score=52.12 Aligned_cols=110 Identities=11% Similarity=0.086 Sum_probs=64.7
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh---cCCCCcEEEEcCCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALL---DDKDIDAVYLPLPT 83 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l---~~~~~D~V~i~~~~ 83 (362)
.+|||.|||.|......+..+.+.+++..+.++..++... ...+...+ -+.|.+.++ ...++|+|++....
T Consensus 20 ~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~pgn~g~~-~~~~~~~i-----~~~d~~~l~~~a~~~~id~vv~g~E~ 93 (442)
T 3lp8_A 20 GSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAPGREGMS-GLADIIDI-----DINSTIEVIQVCKKEKIELVVIGPET 93 (442)
T ss_dssp CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCGGGT-TTSEECCC-----CTTCHHHHHHHHHHTTCCEEEECSHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCCEEEEECCChHHh-hccceeec-----CcCCHHHHHHHHHHhCCCEEEECCcH
Confidence 4689999999965556677777888877676666554322 11111221 245666654 44679999974222
Q ss_pred cccHHHHHHHHHcCCeEEEeCCCCCCHHHHH------HHHHHHHHcCCEE
Q 018020 84 SMHVKWAISVAQKKKHLLMEKPMALNVAEFD------VILNACEENGVQL 127 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~------~l~~~a~~~~~~~ 127 (362)
..-..++..+-+.|.+++. .+.+.++ .+.++++++|++.
T Consensus 94 ~l~~~~~~~l~~~Gi~~~G-----p~~~a~~~~~dK~~~k~~l~~~GIp~ 138 (442)
T 3lp8_A 94 PLMNGLSDALTEEGILVFG-----PSKAAARLESSKGFTKELCMRYGIPT 138 (442)
T ss_dssp HHHTTHHHHHHHTTCEEES-----CCHHHHHHHHCHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHhcCCcEec-----CCHHHHHHhhCHHHHHHHHHHCCCCC
Confidence 2222345555577888773 2333332 2345667788875
No 485
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=92.30 E-value=0.071 Score=50.02 Aligned_cols=113 Identities=8% Similarity=-0.018 Sum_probs=60.1
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh---cCCCCcEEEEcCCCcc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALL---DDKDIDAVYLPLPTSM 85 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l---~~~~~D~V~i~~~~~~ 85 (362)
|||+|||.|......+..+.+..+++++.+.+.++. ...+++ . ++ .-+.|.+.++ ...++|+|+.......
T Consensus 1 m~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~~~~-~~~~~~-~-~~---~~~~d~~~l~~~~~~~~~d~v~~~~E~~~ 74 (422)
T 2xcl_A 1 MNVLIIGKGGREHTLAWKAAQSSLVENVFAAPGNDG-MAASAQ-L-VN---IEESDHAGLVSFAKQNQVGLTIVGPEVPL 74 (422)
T ss_dssp CEEEEEECSHHHHHHHHHHTTCTTCSEEEEEECCGG-GTTTCE-E-CC---CCTTCHHHHHHHHHHTTEEEEEECSHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEeCCChh-hhhhcc-c-cc---cCcCCHHHHHHHHHHcCCCEEEECCcHHH
Confidence 579999999544444555555557887766654443 212222 1 22 1245666654 3457899987432211
Q ss_pred cHHHHHHHHHcCCeEEEeCCCCCCHHHHH-HHHHHHHHcCCEE
Q 018020 86 HVKWAISVAQKKKHLLMEKPMALNVAEFD-VILNACEENGVQL 127 (362)
Q Consensus 86 h~~~~~~al~~gk~V~~EKP~~~~~~~~~-~l~~~a~~~~~~~ 127 (362)
-..++..+-+.|.+++.-.|-+.....=+ .+.+.++++|++.
T Consensus 75 ~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~ 117 (422)
T 2xcl_A 75 IEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPT 117 (422)
T ss_dssp HTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCC
Confidence 11333344467888874334333332222 3345677778764
No 486
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.29 E-value=0.4 Score=44.09 Aligned_cols=89 Identities=9% Similarity=0.100 Sum_probs=59.5
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHHHhc---CCCCcEEEEcCC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEALLD---DKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e~l~---~~~~D~V~i~~~ 82 (362)
-+|.|+|+ |.+|...+..++.. ++++++++ ++++.+ +++++|.. .+.-+ .++.+.+. ...+|+|+-++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~--~~~~~~-~~~~lGa~-~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS-GYIPIATC--SPHNFD-LAKSRGAE-EVFDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE--CGGGHH-HHHHTTCS-EEEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe--CHHHHH-HHHHcCCc-EEEECCCchHHHHHHHHccCCccEEEECCC
Confidence 57999999 88999888888766 78888886 445544 67888853 11111 23333221 235999999999
Q ss_pred CcccHHHHHHHH-Hc-CCeEEE
Q 018020 83 TSMHVKWAISVA-QK-KKHLLM 102 (362)
Q Consensus 83 ~~~h~~~~~~al-~~-gk~V~~ 102 (362)
.....+.+..++ +. |+-|.+
T Consensus 241 ~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 241 NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp SHHHHHHHHHHSCTTCEEEEES
T ss_pred chHHHHHHHHHhhcCCCEEEEE
Confidence 877778888888 44 444444
No 487
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.23 E-value=0.72 Score=41.51 Aligned_cols=89 Identities=18% Similarity=0.136 Sum_probs=56.3
Q ss_pred eEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc---CCCCcEEEEcC
Q 018020 9 IRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD---DKDIDAVYLPL 81 (362)
Q Consensus 9 ~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~---~~~~D~V~i~~ 81 (362)
-+|.|+|+ |.+|...+..++.. +++++ ++++++++.+.+ +++|... +.-+ .++.+.+. ...+|+|+.++
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~-~~~~~~~~~~~~-~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLK-GCKVV-GAAGSDEKIAYL-KQIGFDA-AFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHT-TCEEE-EEESSHHHHHHH-HHTTCSE-EEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CEEEEecCCCcHHHHHHHHHHHC-CCEEE-EEeCCHHHHHHH-HhcCCcE-EEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 46899998 99999888888876 67766 466788877766 6676420 0011 34444332 13699999988
Q ss_pred CCcccHHHHHHHHHcC-CeEEE
Q 018020 82 PTSMHVKWAISVAQKK-KHLLM 102 (362)
Q Consensus 82 ~~~~h~~~~~~al~~g-k~V~~ 102 (362)
... ....+..+++.| +-|++
T Consensus 223 g~~-~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 223 GGE-FLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CHH-HHHHHHTTEEEEEEEEEC
T ss_pred ChH-HHHHHHHHHhcCCEEEEE
Confidence 753 244444555554 44544
No 488
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.19 E-value=0.13 Score=45.18 Aligned_cols=89 Identities=13% Similarity=0.210 Sum_probs=53.7
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHH-----HHHHHH----------------------HHcCC-CCC
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLE-----KATNFA----------------------KANNF-PPD 58 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~-----~~~~~~----------------------~~~~~-~~~ 58 (362)
+..+|.|||+|..|...+..|.+. +++|+ |++++.. ..+.+. ...++ .
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~-Ga~Vt-Viap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~-- 87 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPT-GCKLT-LVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYE-- 87 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGG-TCEEE-EEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSE--
T ss_pred CCCEEEEECCcHHHHHHHHHHHhC-CCEEE-EEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeE--
Confidence 457899999999999999998877 57766 4444321 112221 00111 0
Q ss_pred CcccCCHH-HHhc----CCCCcEEEEcCCCc-ccHHHHHHHHHc---CCeE
Q 018020 59 AKVYGSYE-ALLD----DKDIDAVYLPLPTS-MHVKWAISVAQK---KKHL 100 (362)
Q Consensus 59 ~~~~~~~~-e~l~----~~~~D~V~i~~~~~-~h~~~~~~al~~---gk~V 100 (362)
....+++ +.|+ ..+.|+|+.+|+.. ....++..|-+. |+.|
T Consensus 88 -~i~~~~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~V 137 (274)
T 1kyq_A 88 -YIRSDFKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLV 137 (274)
T ss_dssp -EECSSCCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEE
T ss_pred -EEcCCCCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEE
Confidence 1111221 1222 12589999999987 667777777777 7766
No 489
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.13 E-value=0.4 Score=44.13 Aligned_cols=85 Identities=14% Similarity=0.023 Sum_probs=57.0
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhc---CCCCcEEEEc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLD---DKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~---~~~~D~V~i~ 80 (362)
-+|.|+|+|.+|...++.++.. ++ +|+ +.++++++.+. ++++|... +.-+ +++.+.+. ...+|+|+.+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi-~~~~~~~~~~~-a~~lGa~~-vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA-GASRII-AIDINGEKFPK-AKALGATD-CLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEE-EECSCGGGHHH-HHHTTCSE-EECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEE-EEcCCHHHHHH-HHHhCCcE-EEccccccchHHHHHHHHhCCCccEEEEC
Confidence 3799999999999888888877 66 666 46677776654 46777531 1111 23433322 1379999999
Q ss_pred CCCcccHHHHHHHHHcC
Q 018020 81 LPTSMHVKWAISVAQKK 97 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~g 97 (362)
+......+.+.++++.|
T Consensus 273 ~G~~~~~~~~~~~l~~~ 289 (376)
T 1e3i_A 273 AGTAQTLKAAVDCTVLG 289 (376)
T ss_dssp SCCHHHHHHHHHTBCTT
T ss_pred CCCHHHHHHHHHHhhcC
Confidence 98766667777777765
No 490
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=92.13 E-value=3.7 Score=32.56 Aligned_cols=70 Identities=9% Similarity=0.032 Sum_probs=43.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHH---cCCCCCCc-ccCCHHHHhcCCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKA---NNFPPDAK-VYGSYEALLDDKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~---~~~~~~~~-~~~~~~e~l~~~~~D~V~i~~~ 82 (362)
..+|.=||||. |.......+ +..+++ .+|.+++..+...+. .+++ .+. ...|+.+.+.+..+|+|+...+
T Consensus 36 ~~~vLdiG~G~-G~~~~~l~~--~~~~v~-~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 36 DDVVVDVGCGS-GGMTVEIAK--RCKFVY-AIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAEDVLDKLEFNKAFIGGT 109 (183)
T ss_dssp TCEEEEESCCC-SHHHHHHHT--TSSEEE-EEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHHHGGGCCCSEEEECSC
T ss_pred CCEEEEeCCCC-CHHHHHHHh--cCCeEE-EEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccccccCCCCcEEEECCc
Confidence 45899999997 443333333 567777 578888765544333 3432 122 3467777666567999998766
No 491
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.11 E-value=0.18 Score=46.40 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=76.4
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc--CCHHH-Hhc--CCCCcEEEEcCC
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY--GSYEA-LLD--DKDIDAVYLPLP 82 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~e-~l~--~~~~D~V~i~~~ 82 (362)
-+|.|+|+|.+|...++.++.. ++ +|+ +.++++++.+. ++++|.. .+.-+ .++.+ +.+ ...+|+|+.++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi-~~~~~~~~~~~-a~~lGa~-~vi~~~~~~~~~~~~~~~~gg~D~vid~~g 267 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVC-GASIII-AVDIVESRLEL-AKQLGAT-HVINSKTQDPVAAIKEITDGGVNFALESTG 267 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-TCSEEE-EEESCHHHHHH-HHHHTCS-EEEETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEE-EECCCHHHHHH-HHHcCCC-EEecCCccCHHHHHHHhcCCCCcEEEECCC
Confidence 3799999999999888887766 56 455 56677776654 4667742 01111 23333 222 126999999998
Q ss_pred CcccHHHHHHHHHcC-CeEEEeC-----CCCCCHHHHHHHHHHHHHcCCEEEEeeec-cc--ChhHHHHHHhhcCCCCc
Q 018020 83 TSMHVKWAISVAQKK-KHLLMEK-----PMALNVAEFDVILNACEENGVQLMDGTMW-VH--NPRTAQMKEFVSDPQRF 152 (362)
Q Consensus 83 ~~~h~~~~~~al~~g-k~V~~EK-----P~~~~~~~~~~l~~~a~~~~~~~~v~~~~-r~--~p~~~~~k~~i~~~g~i 152 (362)
.....+.+.++++.| +-|++-- |+..+... + . .+++.+. +... .+ ...+.++-+++ ++|.|
T Consensus 268 ~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~---~---~-~~~~~i~-g~~~~~~~~~~~~~~~~~l~-~~g~l 337 (371)
T 1f8f_A 268 SPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVND---L---L-LGGKTIL-GVVEGSGSPKKFIPELVRLY-QQGKF 337 (371)
T ss_dssp CHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHH---H---H-HTTCEEE-ECSGGGSCHHHHHHHHHHHH-HTTSC
T ss_pred CHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHH---H---H-hCCCEEE-EeCCCCCchHHHHHHHHHHH-HcCCC
Confidence 766667777777665 4444432 23334322 1 1 2345544 3222 11 23467777787 66765
No 492
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=92.06 E-value=1.5 Score=38.92 Aligned_cols=74 Identities=15% Similarity=0.147 Sum_probs=42.9
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHc-----CC-CCCCc-ccCCHHHHhc--CCCCcEE
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKAN-----NF-PPDAK-VYGSYEALLD--DKDIDAV 77 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~-----~~-~~~~~-~~~~~~e~l~--~~~~D~V 77 (362)
.+.||..||+|. |......++..+..+++ ++|.+++..+...+.+ +. .+.+. ...|..+.+. ....|+|
T Consensus 90 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~-~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 90 NPKKVLIIGGGD-GGTLREVLKHDSVEKAI-LCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SCCEEEEEECTT-CHHHHHHTTSTTCSEEE-EEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCEEEEEcCCc-CHHHHHHHhcCCCCEEE-EEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 357899999997 43333333333456655 6899987666554433 11 11222 3567777653 2458999
Q ss_pred EEcCC
Q 018020 78 YLPLP 82 (362)
Q Consensus 78 ~i~~~ 82 (362)
++-.+
T Consensus 168 i~d~~ 172 (296)
T 1inl_A 168 IIDST 172 (296)
T ss_dssp EEEC-
T ss_pred EEcCC
Confidence 97544
No 493
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.05 E-value=0.44 Score=43.43 Aligned_cols=72 Identities=13% Similarity=0.223 Sum_probs=41.8
Q ss_pred eeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHHH--HHHHHHcCCCC-CCcccCC---HHHHhcCCCCcEEEEc
Q 018020 8 AIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEKA--TNFAKANNFPP-DAKVYGS---YEALLDDKDIDAVYLP 80 (362)
Q Consensus 8 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~--~~~~~~~~~~~-~~~~~~~---~~e~l~~~~~D~V~i~ 80 (362)
+++|.|.|+ |++|...++.|.+. +.+|+++. |++++. +.+.+..++.. .....+| ++++++ ++|+|+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~-R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~ 80 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQV-HSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFIN 80 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEE-SCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEE-CCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh--cCCEEEEc
Confidence 578999996 89999999988775 67777654 554332 33332112110 0010223 344455 48999976
Q ss_pred CCC
Q 018020 81 LPT 83 (362)
Q Consensus 81 ~~~ 83 (362)
+..
T Consensus 81 a~~ 83 (352)
T 1xgk_A 81 TTS 83 (352)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 494
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.04 E-value=0.019 Score=53.94 Aligned_cols=80 Identities=14% Similarity=0.001 Sum_probs=54.8
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCcccCCHHHHh--cCCCCcEEEEcCCCcc
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALL--DDKDIDAVYLPLPTSM 85 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~l--~~~~~D~V~i~~~~~~ 85 (362)
..++.|+|+|..|+..+..+++. +++++|++|.++.+... .-.|+ .++. .+++. ...+++.|+|+. ..
T Consensus 52 ~~~v~IiGAG~~G~~l~~~l~~~-g~~ivgfiDdd~~~~g~--~i~Gi----pV~~-~~~l~~~~~~~~~~viiai--~~ 121 (409)
T 2py6_A 52 ATRLVILGTKGFGAHLMNVRHER-PCEVIAAVDDFRYHSGE--LYYGL----PIIS-TDRFTELATHDRDLVALNT--CR 121 (409)
T ss_dssp GCEEEEECSSSTHHHHHSCSSSC-SSEEEEEECTTTTTSCC--EETTE----EEEC-HHHHHHHHHTCTTEEEEEC--CC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHC-CCEEEEEEeCCcccccC--EECCE----EEEC-HHHHHHHHhCCCCEEEEec--cH
Confidence 45799999999999998877664 69999999986542111 11233 3554 34443 345688888888 45
Q ss_pred cHHHHHHHHHcC
Q 018020 86 HVKWAISVAQKK 97 (362)
Q Consensus 86 h~~~~~~al~~g 97 (362)
..+++..+.+.|
T Consensus 122 r~~i~~~l~~~g 133 (409)
T 2py6_A 122 YDGPKRFFDQIC 133 (409)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC
Confidence 677777777666
No 495
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=91.98 E-value=2.8 Score=32.27 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=63.6
Q ss_pred ceeEEEEEeccHHHHHHH-HHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc------CCHHHHh----c-CCCC
Q 018020 7 AAIRFGIIGAADIARKLS-RAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY------GSYEALL----D-DKDI 74 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~-~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~------~~~~e~l----~-~~~~ 74 (362)
+++||.||.-...-...+ ..+....++++++.+....+..+.+ ++.. ++..+. .+--+++ + .+.+
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l-~~~~--~dlii~D~~l~~~~g~~~~~~l~~~~~~~ 80 (153)
T 3cz5_A 4 STARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLY-RETT--PDIVVMDLTLPGPGGIEATRHIRQWDGAA 80 (153)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHH-HTTC--CSEEEECSCCSSSCHHHHHHHHHHHCTTC
T ss_pred cccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHH-hcCC--CCEEEEecCCCCCCHHHHHHHHHHhCCCC
Confidence 478999999887655444 4455446888886665544444333 3322 121111 1222222 2 2456
Q ss_pred cEEEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 018020 75 DAVYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEEN 123 (362)
Q Consensus 75 D~V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~ 123 (362)
-+|+++.... .+....++++|..-++.||+.. ++..+.++.+-+.
T Consensus 81 ~ii~ls~~~~--~~~~~~~~~~g~~~~l~kp~~~--~~L~~~i~~~~~~ 125 (153)
T 3cz5_A 81 RILIFTMHQG--SAFALKAFEAGASGYVTKSSDP--AELVQAIEAILAG 125 (153)
T ss_dssp CEEEEESCCS--HHHHHHHHHTTCSEEEETTSCT--THHHHHHHHHTTT
T ss_pred eEEEEECCCC--HHHHHHHHHCCCcEEEecCCCH--HHHHHHHHHHHhC
Confidence 6666655443 5677889999999899999744 4555555544443
No 496
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=91.93 E-value=0.42 Score=45.78 Aligned_cols=86 Identities=8% Similarity=0.081 Sum_probs=55.1
Q ss_pred eeEEEEEeccHHHHH-HHHHHhcCCCcEEEEEEcCCHHH-HHHHHHHcCCCCCCccc--CCHHHHhcCCCCcEEEEcCCC
Q 018020 8 AIRFGIIGAADIARK-LSRAITLAPNAVLSAVASRSLEK-ATNFAKANNFPPDAKVY--GSYEALLDDKDIDAVYLPLPT 83 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~-~~~~~~~~~~~~vv~v~d~~~~~-~~~~~~~~~~~~~~~~~--~~~~e~l~~~~~D~V~i~~~~ 83 (362)
..||.+||.|..|.. .+..|.+. +.+|. ++|..... .+.+ ++.|++ ++ .+.+ .++ +.|+|++...-
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~-G~~V~-~~D~~~~~~~~~l-~~~gi~----~~~g~~~~-~~~--~a~~vv~s~~i 88 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANE-GYQIS-GSDLAPNPVTQQL-MNLGAT----IYFNHRPE-NVR--DASVVVVSSAI 88 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT-TCEEE-EECSSCCHHHHHH-HHTTCE----EESSCCGG-GGT--TCSEEEECTTC
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhC-CCeEE-EECCCCCHHHHHH-HHCCCE----EECCCCHH-HcC--CCCEEEECCCC
Confidence 468999999999886 77888776 78766 56654332 2333 445653 33 2333 343 58999887543
Q ss_pred cccHHHHHHHHHcCCeEEEe
Q 018020 84 SMHVKWAISVAQKKKHLLME 103 (362)
Q Consensus 84 ~~h~~~~~~al~~gk~V~~E 103 (362)
....+.+.+|.+.|.+|+.+
T Consensus 89 ~~~~p~~~~a~~~~ipvl~~ 108 (491)
T 2f00_A 89 SADNPEIVAAHEARIPVIRR 108 (491)
T ss_dssp CTTCHHHHHHHHTTCCEEEH
T ss_pred CCCCHHHHHHHHcCCcEEEH
Confidence 33345566777888888754
No 497
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=91.92 E-value=0.26 Score=44.41 Aligned_cols=118 Identities=11% Similarity=0.027 Sum_probs=64.3
Q ss_pred ceeEEEEEec-cHHHHHHHHHHhcCCCcEEEEEEcCCHHH----HHHHHHHcC--CC---CCCcccCCHHHHhcCCCCcE
Q 018020 7 AAIRFGIIGA-ADIARKLSRAITLAPNAVLSAVASRSLEK----ATNFAKANN--FP---PDAKVYGSYEALLDDKDIDA 76 (362)
Q Consensus 7 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~vv~v~d~~~~~----~~~~~~~~~--~~---~~~~~~~~~~e~l~~~~~D~ 76 (362)
++++|.|.|+ |++|...+..|.+. +.+|++ ++++.+. .+.+....+ +. -+..-.++++++++..++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH-GYDVVI-ADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT-TCEEEE-ECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC-CCcEEE-EecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence 3578999995 89999999999877 688775 4554322 223322222 10 11111234455666456999
Q ss_pred EEEcCCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC--EEEEeeeccc
Q 018020 77 VYLPLPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEENGV--QLMDGTMWVH 135 (362)
Q Consensus 77 V~i~~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~~~--~~~v~~~~r~ 135 (362)
|+.+.............. .-+..++.....+++.+++.+. .+++....-|
T Consensus 82 vih~A~~~~~~~~~~~~~---------~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~ 133 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPI---------EYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVY 133 (341)
T ss_dssp EEECCCCCCHHHHHHCHH---------HHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGB
T ss_pred EEECccccccCccccChH---------HHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEe
Confidence 997654322111100000 0012256667788888888764 4555554333
No 498
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.86 E-value=0.35 Score=44.45 Aligned_cols=90 Identities=8% Similarity=-0.058 Sum_probs=58.9
Q ss_pred eEEEEEeccHHHHHHHHHHhcCCCc-EEEEEEcCCHHHHHHHHHHcCCCCCCccc----CCHHHHhc---CCCCcEEEEc
Q 018020 9 IRFGIIGAADIARKLSRAITLAPNA-VLSAVASRSLEKATNFAKANNFPPDAKVY----GSYEALLD---DKDIDAVYLP 80 (362)
Q Consensus 9 ~~v~iiG~G~~g~~~~~~~~~~~~~-~vv~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~e~l~---~~~~D~V~i~ 80 (362)
-+|.|+|+|.+|...++.++.. ++ +|+ +.++++++.+. ++++|... +.-+ .++.+.+. ...+|+|+.+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi-~~~~~~~~~~~-a~~lGa~~-vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA-GASRII-GVGTHKDKFPK-AIELGATE-CLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEE-EECSCGGGHHH-HHHTTCSE-EECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEE-EECCCHHHHHH-HHHcCCcE-EEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 4799999999999888888766 56 665 46677766654 56787531 1112 23433332 1379999999
Q ss_pred CCCcccHHHHHHHHHcC--CeEEE
Q 018020 81 LPTSMHVKWAISVAQKK--KHLLM 102 (362)
Q Consensus 81 ~~~~~h~~~~~~al~~g--k~V~~ 102 (362)
+......+.+.++++.| +-|++
T Consensus 269 ~g~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 269 AGRIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEE
Confidence 98766677777777765 44444
No 499
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.85 E-value=0.63 Score=45.37 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=67.3
Q ss_pred eeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcCCHHHHHHHHHHcCCCCCCccc---CCHHHHhc--CCCCcEEEEcCC
Q 018020 8 AIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVY---GSYEALLD--DKDIDAVYLPLP 82 (362)
Q Consensus 8 ~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~--~~~~D~V~i~~~ 82 (362)
+.+|.|+|+|..|...+..|.+. +.+++ ++|.++++.+.+.++++++ .++ .+.+.+.+ -.+.|+|++ |+
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~-~~~vv-vid~~~~~~~~~~~~~~~~---~i~Gd~~~~~~L~~a~i~~a~~vi~-t~ 200 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESR-NHLFV-VVTDNYDQALHLEEQEGFK---VVYGSPTDAHVLAGLRVAAARSIIA-NL 200 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTT-TCCEE-EEESCHHHHHHHHHSCSSE---EEESCTTCHHHHHHTTGGGCSEEEE-CS
T ss_pred CCeEEEECCChHHHHHHHHHHHC-CCCEE-EEECCHHHHHHHHHhcCCe---EEEeCCCCHHHHHhcCcccCCEEEE-eC
Confidence 56899999999999999999765 56655 6789999988887765653 222 23333322 246899988 66
Q ss_pred CcccHHHHHHHHHc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Q 018020 83 TSMHVKWAISVAQK--KKHLLMEKPMALNVAEFDVILNACEENGVQLM 128 (362)
Q Consensus 83 ~~~h~~~~~~al~~--gk~V~~EKP~~~~~~~~~~l~~~a~~~~~~~~ 128 (362)
++...-.+...++. ..+|++. +.+.+..+.+ ++.|....
T Consensus 201 ~D~~n~~~~~~ar~~~~~~iiar---~~~~~~~~~l----~~~Gad~v 241 (565)
T 4gx0_A 201 SDPDNANLCLTVRSLCQTPIIAV---VKEPVHGELL----RLAGANQV 241 (565)
T ss_dssp CHHHHHHHHHHHHTTCCCCEEEE---CSSGGGHHHH----HHHTCSEE
T ss_pred CcHHHHHHHHHHHHhcCceEEEE---ECCHHHHHHH----HHcCCCEE
Confidence 65443333333332 4567664 3444444443 34555433
No 500
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=91.81 E-value=0.72 Score=43.38 Aligned_cols=117 Identities=9% Similarity=0.085 Sum_probs=72.0
Q ss_pred ceeEEEEEeccHHHHHHHHHHhcCCCcEEEEEEcC-----------CHH---HHHHHHHHc-C-CC---C--CCcccCCH
Q 018020 7 AAIRFGIIGAADIARKLSRAITLAPNAVLSAVASR-----------SLE---KATNFAKAN-N-FP---P--DAKVYGSY 65 (362)
Q Consensus 7 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~vv~v~d~-----------~~~---~~~~~~~~~-~-~~---~--~~~~~~~~ 65 (362)
+..+|+|.|+|.+|...+..|.+. +.+||+|+|. +++ .+..+.++. + +. . +.+.. +.
T Consensus 229 ~g~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i-~~ 306 (449)
T 1bgv_A 229 VGKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFF-PG 306 (449)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEE-ET
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEe-Cc
Confidence 347899999999999888877766 8999999983 443 333333332 1 10 0 01111 22
Q ss_pred HHHhcCCCCcEEEEc-CCCcccHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCEEEE
Q 018020 66 EALLDDKDIDAVYLP-LPTSMHVKWAISVAQKKKHLLMEKPMALNVAEFDVILNACEEN-GVQLMD 129 (362)
Q Consensus 66 ~e~l~~~~~D~V~i~-~~~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~-~~~~~v 129 (362)
++++. .++|+.+=| +++..+.+-+.....+|..+++|--=.....++. +...++ |+.+..
T Consensus 307 ~e~~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~---~~l~~~~Gi~~~P 368 (449)
T 1bgv_A 307 EKPWG-QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEAL---RFLMQQPNMVVAP 368 (449)
T ss_dssp CCGGG-SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHH---HHHHHCTTCEEEC
T ss_pred hhhhc-CCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHH---HHHHHcCCEEEEC
Confidence 34564 478988854 5666777777777777888888862111223333 444556 776653
Done!