Query 018022
Match_columns 362
No_of_seqs 136 out of 1280
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 05:28:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018022.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018022hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.4E-61 3.1E-66 448.1 31.7 308 14-357 1-309 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 9.8E-60 2.1E-64 427.1 31.9 336 15-357 1-337 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 2.5E-58 5.4E-63 411.4 31.5 346 11-359 2-348 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.4E-54 3E-59 390.2 28.3 313 15-358 3-322 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 9.2E-53 2E-57 377.5 28.2 323 10-359 3-329 (360)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 2.7E-50 5.8E-55 388.9 35.5 338 17-360 1-348 (371)
7 PLN02740 Alcohol dehydrogenase 100.0 4E-50 8.6E-55 389.0 36.1 349 10-360 4-357 (381)
8 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.5E-49 3.3E-54 381.9 35.1 330 16-360 1-334 (358)
9 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.6E-48 3.5E-53 376.0 35.8 341 17-360 2-344 (368)
10 cd08300 alcohol_DH_class_III c 100.0 2.8E-48 6.1E-53 374.4 37.2 342 16-360 2-345 (368)
11 cd08301 alcohol_DH_plants Plan 100.0 2.2E-48 4.7E-53 375.3 36.2 343 15-360 1-346 (369)
12 COG1063 Tdh Threonine dehydrog 100.0 1.6E-48 3.5E-53 372.4 32.7 312 17-356 1-318 (350)
13 PLN02827 Alcohol dehydrogenase 100.0 1.7E-47 3.7E-52 370.0 36.5 338 15-360 11-352 (378)
14 cd08239 THR_DH_like L-threonin 100.0 1.5E-47 3.3E-52 365.0 34.6 310 17-360 1-315 (339)
15 cd08277 liver_alcohol_DH_like 100.0 5.1E-47 1.1E-51 365.3 36.5 340 15-360 1-342 (365)
16 PRK09880 L-idonate 5-dehydroge 100.0 4.1E-47 8.9E-52 363.0 33.2 307 14-360 2-318 (343)
17 COG0604 Qor NADPH:quinone redu 100.0 1.4E-47 3E-52 361.8 29.4 293 17-361 1-301 (326)
18 PLN02586 probable cinnamyl alc 100.0 2.7E-46 5.8E-51 359.5 33.4 313 12-357 8-326 (360)
19 TIGR02819 fdhA_non_GSH formald 100.0 1.4E-45 2.9E-50 357.9 33.8 314 17-355 3-358 (393)
20 PLN02178 cinnamyl-alcohol dehy 100.0 8.3E-45 1.8E-49 350.6 33.4 306 19-357 9-321 (375)
21 PRK10309 galactitol-1-phosphat 100.0 1.3E-44 2.7E-49 346.2 34.0 313 17-360 1-321 (347)
22 cd08230 glucose_DH Glucose deh 100.0 1.1E-44 2.4E-49 347.7 32.7 309 17-360 1-332 (355)
23 TIGR03201 dearomat_had 6-hydro 100.0 1.6E-44 3.5E-49 345.8 32.8 305 20-355 2-318 (349)
24 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.8E-44 6E-49 341.5 31.9 299 20-360 2-305 (329)
25 cd08233 butanediol_DH_like (2R 100.0 1.5E-43 3.3E-48 339.2 34.5 310 17-360 1-325 (351)
26 PLN02514 cinnamyl-alcohol dehy 100.0 1.7E-43 3.7E-48 339.8 34.5 316 15-360 8-325 (357)
27 cd08299 alcohol_DH_class_I_II_ 100.0 9E-43 2E-47 336.6 37.4 337 13-354 4-341 (373)
28 cd08231 MDR_TM0436_like Hypoth 100.0 7E-43 1.5E-47 335.9 34.9 323 18-360 2-337 (361)
29 cd08237 ribitol-5-phosphate_DH 100.0 1.1E-43 2.4E-48 339.0 27.9 296 15-360 1-312 (341)
30 cd05279 Zn_ADH1 Liver alcohol 100.0 1.6E-42 3.6E-47 333.9 36.0 332 17-355 1-335 (365)
31 KOG1197 Predicted quinone oxid 100.0 8.3E-44 1.8E-48 309.3 23.8 294 12-361 4-306 (336)
32 cd08278 benzyl_alcohol_DH Benz 100.0 1.6E-42 3.5E-47 334.0 34.9 334 15-354 1-335 (365)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 3.5E-42 7.7E-47 329.7 35.1 311 17-354 1-316 (351)
34 cd08296 CAD_like Cinnamyl alco 100.0 4.5E-41 9.7E-46 319.9 34.3 305 17-356 1-306 (333)
35 PRK10083 putative oxidoreducta 100.0 3.7E-41 8.1E-46 320.9 33.6 307 17-360 1-311 (339)
36 cd08238 sorbose_phosphate_red 100.0 5.4E-41 1.2E-45 328.1 33.0 306 15-360 1-344 (410)
37 cd08279 Zn_ADH_class_III Class 100.0 3.2E-40 7E-45 317.7 36.3 331 17-354 1-332 (363)
38 cd05284 arabinose_DH_like D-ar 100.0 1.5E-40 3.2E-45 316.8 33.5 307 17-357 1-313 (340)
39 cd08283 FDH_like_1 Glutathione 100.0 1.6E-39 3.5E-44 315.3 35.3 323 17-355 1-353 (386)
40 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.7E-39 3.6E-44 311.1 33.8 304 17-355 1-320 (350)
41 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.7E-39 5.8E-44 308.9 35.1 310 17-355 1-313 (345)
42 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.3E-39 2.9E-44 311.7 32.6 313 17-360 1-325 (350)
43 cd05278 FDH_like Formaldehyde 100.0 1.7E-39 3.6E-44 310.3 33.0 310 17-355 1-314 (347)
44 TIGR01202 bchC 2-desacetyl-2-h 100.0 4.2E-40 9.1E-45 310.0 27.6 278 16-360 1-284 (308)
45 cd08286 FDH_like_ADH2 formalde 100.0 3.4E-39 7.3E-44 308.3 33.9 306 17-354 1-310 (345)
46 cd08246 crotonyl_coA_red croto 100.0 1.6E-39 3.5E-44 316.1 32.1 319 13-360 9-367 (393)
47 KOG0025 Zn2+-binding dehydroge 100.0 8.3E-40 1.8E-44 289.2 25.1 291 11-356 14-322 (354)
48 TIGR03366 HpnZ_proposed putati 100.0 1.4E-39 3.1E-44 302.4 26.7 254 73-351 1-262 (280)
49 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.4E-38 3.1E-43 299.3 33.4 301 17-350 1-306 (306)
50 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.7E-38 5.9E-43 304.7 34.6 331 17-355 1-336 (367)
51 cd08291 ETR_like_1 2-enoyl thi 100.0 7.2E-39 1.6E-43 303.6 30.0 287 17-360 1-300 (324)
52 PRK13771 putative alcohol dehy 100.0 1E-38 2.3E-43 303.3 31.2 307 17-360 1-308 (334)
53 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.2E-38 7E-43 300.5 34.3 307 17-359 1-310 (337)
54 TIGR01751 crot-CoA-red crotony 100.0 1.9E-38 4.1E-43 309.1 32.6 320 12-360 3-362 (398)
55 cd08287 FDH_like_ADH3 formalde 100.0 3.7E-38 7.9E-43 301.0 33.9 304 17-354 1-313 (345)
56 cd05283 CAD1 Cinnamyl alcohol 100.0 2.1E-38 4.5E-43 302.1 31.8 309 18-356 1-310 (337)
57 PRK05396 tdh L-threonine 3-deh 100.0 3.1E-38 6.6E-43 301.2 32.9 310 17-359 1-315 (341)
58 cd08265 Zn_ADH3 Alcohol dehydr 100.0 5E-38 1.1E-42 304.7 33.8 311 15-355 27-354 (384)
59 PRK09422 ethanol-active dehydr 100.0 6.2E-38 1.3E-42 298.5 33.9 307 17-357 1-309 (338)
60 PLN02702 L-idonate 5-dehydroge 100.0 9.6E-38 2.1E-42 300.6 35.3 308 13-353 14-328 (364)
61 cd08235 iditol_2_DH_like L-idi 100.0 9.1E-38 2E-42 297.9 34.1 306 17-354 1-312 (343)
62 cd08284 FDH_like_2 Glutathione 100.0 1E-37 2.2E-42 297.7 34.3 308 17-354 1-312 (344)
63 cd08282 PFDH_like Pseudomonas 100.0 1.2E-37 2.7E-42 301.0 34.8 316 17-355 1-344 (375)
64 cd08297 CAD3 Cinnamyl alcohol 100.0 1.7E-37 3.6E-42 296.0 34.6 308 17-356 1-313 (341)
65 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.9E-37 4.2E-42 294.5 33.8 306 17-355 1-309 (338)
66 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.3E-37 5.1E-42 292.9 31.5 301 17-360 1-303 (325)
67 cd08292 ETR_like_2 2-enoyl thi 100.0 2.4E-37 5.2E-42 292.3 31.3 287 17-360 1-300 (324)
68 cd05285 sorbitol_DH Sorbitol d 100.0 4.6E-37 1E-41 293.4 32.8 301 19-353 1-308 (343)
69 cd08266 Zn_ADH_like1 Alcohol d 100.0 6E-37 1.3E-41 290.6 33.0 312 17-360 1-317 (342)
70 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.2E-36 2.6E-41 288.2 33.5 307 17-360 1-308 (332)
71 cd08242 MDR_like Medium chain 100.0 9.2E-37 2E-41 288.3 31.7 291 17-360 1-295 (319)
72 cd08236 sugar_DH NAD(P)-depend 100.0 2.1E-36 4.6E-41 288.6 34.2 306 17-353 1-310 (343)
73 PLN03154 putative allyl alcoho 100.0 1.1E-36 2.4E-41 291.5 31.8 291 12-360 4-320 (348)
74 cd08234 threonine_DH_like L-th 100.0 2.6E-36 5.7E-41 286.7 33.9 303 17-354 1-303 (334)
75 cd08245 CAD Cinnamyl alcohol d 100.0 2.6E-36 5.7E-41 286.3 32.8 303 18-356 1-304 (330)
76 cd08298 CAD2 Cinnamyl alcohol 100.0 4.7E-36 1E-40 284.5 32.4 297 17-355 1-302 (329)
77 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.7E-36 1.2E-40 285.4 32.9 294 17-355 1-310 (341)
78 cd05281 TDH Threonine dehydrog 100.0 5E-36 1.1E-40 286.0 32.3 304 17-354 1-309 (341)
79 cd08295 double_bond_reductase_ 100.0 2.6E-36 5.7E-41 287.7 30.0 289 15-360 6-313 (338)
80 cd08232 idonate-5-DH L-idonate 100.0 5.9E-36 1.3E-40 285.1 32.1 299 21-354 2-306 (339)
81 cd08274 MDR9 Medium chain dehy 100.0 1E-35 2.2E-40 284.4 31.8 300 17-360 1-325 (350)
82 TIGR00692 tdh L-threonine 3-de 100.0 2E-35 4.3E-40 281.8 32.2 298 23-353 5-307 (340)
83 TIGR02825 B4_12hDH leukotriene 100.0 1.9E-35 4E-40 280.3 30.3 269 29-360 19-301 (325)
84 cd08294 leukotriene_B4_DH_like 100.0 2.1E-35 4.5E-40 279.8 30.5 281 16-360 2-304 (329)
85 cd08293 PTGR2 Prostaglandin re 100.0 3.2E-35 6.9E-40 280.7 31.2 275 29-359 23-319 (345)
86 TIGR02817 adh_fam_1 zinc-bindi 100.0 4.6E-35 1E-39 278.4 29.7 286 18-360 1-307 (336)
87 cd08290 ETR 2-enoyl thioester 100.0 9.2E-35 2E-39 277.0 30.0 289 17-360 1-313 (341)
88 cd08276 MDR7 Medium chain dehy 100.0 8.4E-34 1.8E-38 269.0 33.7 305 17-358 1-309 (336)
89 cd08244 MDR_enoyl_red Possible 100.0 9.4E-34 2E-38 267.6 32.0 289 17-360 1-299 (324)
90 PTZ00354 alcohol dehydrogenase 100.0 8.3E-34 1.8E-38 269.0 30.7 288 16-359 1-302 (334)
91 PRK10754 quinone oxidoreductas 100.0 7.4E-34 1.6E-38 269.2 27.6 285 16-355 1-295 (327)
92 cd05188 MDR Medium chain reduc 100.0 2.4E-33 5.3E-38 257.3 28.3 269 43-347 1-271 (271)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 6.1E-33 1.3E-37 262.2 30.1 289 17-359 1-299 (325)
94 cd05282 ETR_like 2-enoyl thioe 100.0 7.3E-33 1.6E-37 261.5 30.1 276 29-360 14-299 (323)
95 cd08269 Zn_ADH9 Alcohol dehydr 100.0 9.3E-33 2E-37 259.5 30.7 273 23-354 2-279 (312)
96 cd08250 Mgc45594_like Mgc45594 100.0 1.2E-32 2.7E-37 260.9 30.1 282 16-356 1-299 (329)
97 cd08249 enoyl_reductase_like e 100.0 4.8E-33 1E-37 265.4 27.1 287 17-359 1-310 (339)
98 cd08243 quinone_oxidoreductase 100.0 2.1E-32 4.5E-37 257.5 30.8 289 17-359 1-295 (320)
99 cd08289 MDR_yhfp_like Yhfp put 100.0 2.1E-32 4.5E-37 258.9 29.6 262 17-331 1-269 (326)
100 cd08252 AL_MDR Arginate lyase 100.0 2.8E-32 6E-37 259.1 30.5 284 17-356 1-305 (336)
101 TIGR02823 oxido_YhdH putative 100.0 6.7E-32 1.4E-36 255.3 31.4 284 18-355 1-294 (323)
102 cd08270 MDR4 Medium chain dehy 100.0 3.7E-32 7.9E-37 254.8 28.5 275 17-360 1-280 (305)
103 cd05276 p53_inducible_oxidored 100.0 1.8E-31 3.9E-36 250.4 30.3 288 17-360 1-300 (323)
104 cd08253 zeta_crystallin Zeta-c 100.0 4.4E-31 9.5E-36 248.2 31.4 291 17-359 1-299 (325)
105 KOG1198 Zinc-binding oxidoredu 100.0 3.3E-32 7.1E-37 257.6 22.9 277 29-361 20-321 (347)
106 cd08248 RTN4I1 Human Reticulon 100.0 1.1E-31 2.4E-36 256.6 26.2 287 17-360 1-326 (350)
107 cd05286 QOR2 Quinone oxidoredu 100.0 8.9E-31 1.9E-35 245.4 31.6 285 18-359 1-294 (320)
108 COG2130 Putative NADP-dependen 100.0 3E-31 6.5E-36 237.2 25.7 270 29-357 27-310 (340)
109 cd08288 MDR_yhdh Yhdh putative 100.0 1.5E-30 3.2E-35 246.1 31.1 284 17-354 1-294 (324)
110 cd08271 MDR5 Medium chain dehy 100.0 8.6E-31 1.9E-35 247.0 28.3 285 17-356 1-296 (325)
111 cd08272 MDR6 Medium chain dehy 100.0 1.5E-30 3.3E-35 245.0 29.9 284 17-357 1-297 (326)
112 cd05288 PGDH Prostaglandin deh 100.0 2E-30 4.4E-35 245.6 29.6 282 17-358 2-304 (329)
113 TIGR02824 quinone_pig3 putativ 100.0 4.3E-30 9.4E-35 241.7 29.6 286 17-358 1-298 (325)
114 cd08268 MDR2 Medium chain dehy 100.0 7.4E-30 1.6E-34 240.4 30.9 292 17-359 1-302 (328)
115 cd08247 AST1_like AST1 is a cy 100.0 9.5E-30 2.1E-34 243.7 30.3 291 18-359 2-326 (352)
116 cd08273 MDR8 Medium chain dehy 100.0 4.3E-30 9.3E-35 243.5 27.2 283 18-359 2-306 (331)
117 cd08241 QOR1 Quinone oxidoredu 100.0 2.5E-29 5.4E-34 236.0 30.2 285 17-358 1-297 (323)
118 cd05289 MDR_like_2 alcohol deh 100.0 2.5E-29 5.3E-34 234.9 27.6 278 17-359 1-285 (309)
119 cd08251 polyketide_synthase po 100.0 4.4E-29 9.4E-34 232.7 27.4 269 36-359 2-279 (303)
120 cd08275 MDR3 Medium chain dehy 100.0 5.1E-28 1.1E-32 229.2 31.8 287 18-360 1-312 (337)
121 cd05195 enoyl_red enoyl reduct 100.0 3.9E-28 8.5E-33 224.1 25.0 260 42-360 1-270 (293)
122 cd08267 MDR1 Medium chain dehy 100.0 1.1E-27 2.4E-32 225.2 27.0 273 30-360 15-296 (319)
123 smart00829 PKS_ER Enoylreducta 100.0 1.9E-27 4E-32 219.5 24.5 251 46-356 2-261 (288)
124 KOG1196 Predicted NAD-dependen 99.9 9.4E-25 2E-29 195.0 26.3 283 16-357 3-312 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 1.2E-24 2.6E-29 201.4 24.2 225 68-360 18-253 (277)
126 PF08240 ADH_N: Alcohol dehydr 99.9 1.7E-23 3.7E-28 166.7 8.9 108 41-170 1-109 (109)
127 KOG1202 Animal-type fatty acid 99.8 5.7E-20 1.2E-24 186.5 15.1 267 29-361 1429-1717(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 8.9E-19 1.9E-23 143.6 14.5 129 212-349 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.4 4.6E-12 1E-16 125.3 15.1 152 198-355 161-335 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.3 1.2E-10 2.6E-15 112.6 16.1 141 190-352 189-333 (413)
131 PF13602 ADH_zinc_N_2: Zinc-bi 98.6 1.7E-08 3.6E-13 82.1 0.7 98 245-360 1-104 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.5 9.5E-07 2.1E-11 87.6 12.0 128 200-330 162-312 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.4 5.2E-06 1.1E-10 80.9 13.8 102 189-306 198-301 (425)
134 TIGR00936 ahcY adenosylhomocys 98.3 1.6E-05 3.6E-10 76.9 14.5 102 189-306 181-284 (406)
135 TIGR01035 hemA glutamyl-tRNA r 98.3 3.9E-08 8.4E-13 96.4 -3.7 159 73-284 89-252 (417)
136 PRK11873 arsM arsenite S-adeno 98.2 1.2E-05 2.7E-10 74.3 10.4 103 196-306 72-185 (272)
137 PLN02494 adenosylhomocysteinas 98.1 3.2E-05 7E-10 75.7 12.9 101 190-306 241-343 (477)
138 PRK08306 dipicolinate synthase 98.1 5E-05 1.1E-09 71.1 13.3 111 201-328 151-261 (296)
139 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1E-05 2.3E-10 76.2 8.4 109 165-285 139-251 (311)
140 PRK00045 hemA glutamyl-tRNA re 98.0 1.5E-07 3.3E-12 92.4 -5.7 161 72-284 90-254 (423)
141 PRK00517 prmA ribosomal protei 98.0 0.00019 4E-09 65.6 13.4 129 155-306 78-215 (250)
142 PTZ00075 Adenosylhomocysteinas 97.8 0.00022 4.7E-09 70.2 12.1 92 199-306 251-343 (476)
143 PRK12771 putative glutamate sy 97.8 1.8E-05 4E-10 80.8 4.7 81 198-284 133-234 (564)
144 TIGR00518 alaDH alanine dehydr 97.8 0.00016 3.5E-09 69.8 10.4 99 201-308 166-271 (370)
145 TIGR02853 spore_dpaA dipicolin 97.8 0.00025 5.5E-09 66.0 11.1 110 201-327 150-259 (287)
146 PRK08324 short chain dehydroge 97.7 0.00031 6.7E-09 73.4 12.4 137 155-306 386-559 (681)
147 COG2518 Pcm Protein-L-isoaspar 97.7 0.00044 9.4E-09 60.6 10.3 118 173-303 46-168 (209)
148 TIGR00406 prmA ribosomal prote 97.5 0.00039 8.5E-09 64.8 8.9 97 199-306 157-261 (288)
149 PF01488 Shikimate_DH: Shikima 97.5 0.00056 1.2E-08 56.3 8.0 96 200-305 10-110 (135)
150 COG4221 Short-chain alcohol de 97.4 0.00086 1.9E-08 59.9 8.7 79 201-282 5-91 (246)
151 PRK05693 short chain dehydroge 97.4 0.0029 6.3E-08 58.2 12.6 77 203-282 2-82 (274)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0028 6E-08 56.8 12.1 104 201-306 4-137 (238)
153 PRK05993 short chain dehydroge 97.3 0.004 8.7E-08 57.5 12.7 103 201-306 3-136 (277)
154 PF00670 AdoHcyase_NAD: S-aden 97.3 0.0028 6.1E-08 53.4 10.3 104 199-322 20-124 (162)
155 PRK06182 short chain dehydroge 97.3 0.003 6.5E-08 58.1 11.7 79 201-282 2-84 (273)
156 COG0300 DltE Short-chain dehyd 97.3 0.0076 1.6E-07 55.1 13.5 81 200-282 4-94 (265)
157 COG2242 CobL Precorrin-6B meth 97.3 0.0039 8.4E-08 53.6 10.7 102 194-305 27-136 (187)
158 KOG1209 1-Acyl dihydroxyaceton 97.2 0.0027 5.8E-08 55.4 9.5 113 200-314 5-148 (289)
159 PRK00377 cbiT cobalt-precorrin 97.1 0.0055 1.2E-07 53.8 11.1 102 195-303 34-144 (198)
160 KOG1205 Predicted dehydrogenas 97.1 0.006 1.3E-07 56.2 11.5 113 201-314 11-159 (282)
161 PF02826 2-Hacid_dh_C: D-isome 97.1 0.0044 9.4E-08 53.5 9.6 90 200-305 34-128 (178)
162 PRK13943 protein-L-isoaspartat 97.1 0.0066 1.4E-07 57.4 11.4 102 194-303 73-179 (322)
163 PF11017 DUF2855: Protein of u 97.0 0.043 9.4E-07 51.3 16.1 138 155-306 90-233 (314)
164 PRK06139 short chain dehydroge 97.0 0.01 2.2E-07 56.5 12.3 79 201-282 6-94 (330)
165 PRK11705 cyclopropane fatty ac 97.0 0.006 1.3E-07 59.3 10.5 107 187-304 153-267 (383)
166 COG3967 DltE Short-chain dehyd 96.9 0.0046 9.9E-08 53.8 8.2 77 201-282 4-88 (245)
167 PRK07109 short chain dehydroge 96.9 0.013 2.9E-07 55.7 12.3 103 201-306 7-145 (334)
168 PRK05872 short chain dehydroge 96.9 0.014 3.1E-07 54.4 12.2 79 201-282 8-95 (296)
169 PRK07825 short chain dehydroge 96.9 0.016 3.5E-07 53.1 12.3 78 202-282 5-88 (273)
170 PF13460 NAD_binding_10: NADH( 96.9 0.025 5.3E-07 48.5 12.7 92 205-306 1-99 (183)
171 PLN03209 translocon at the inn 96.9 0.015 3.3E-07 58.8 12.6 106 195-306 73-209 (576)
172 PRK07326 short chain dehydroge 96.8 0.016 3.4E-07 51.8 11.5 81 201-282 5-92 (237)
173 PRK08265 short chain dehydroge 96.8 0.018 3.9E-07 52.6 12.0 79 201-282 5-90 (261)
174 PRK12742 oxidoreductase; Provi 96.8 0.028 6E-07 50.2 13.0 100 201-306 5-133 (237)
175 PRK06505 enoyl-(acyl carrier p 96.8 0.019 4E-07 53.0 12.0 81 201-282 6-95 (271)
176 PRK07231 fabG 3-ketoacyl-(acyl 96.8 0.023 4.9E-07 51.2 12.3 81 201-282 4-91 (251)
177 TIGR00438 rrmJ cell division p 96.8 0.022 4.9E-07 49.4 11.7 102 196-305 27-147 (188)
178 PRK08339 short chain dehydroge 96.8 0.038 8.2E-07 50.6 13.7 103 201-306 7-145 (263)
179 PRK07806 short chain dehydroge 96.7 0.025 5.5E-07 50.9 12.2 101 201-305 5-135 (248)
180 PRK08177 short chain dehydroge 96.7 0.0096 2.1E-07 53.0 9.3 77 203-282 2-81 (225)
181 PF01135 PCMT: Protein-L-isoas 96.7 0.0031 6.6E-08 55.9 5.9 103 193-305 64-174 (209)
182 PRK12939 short chain dehydroge 96.7 0.026 5.7E-07 50.7 12.2 79 201-282 6-94 (250)
183 COG1748 LYS9 Saccharopine dehy 96.7 0.02 4.4E-07 55.2 11.5 96 203-306 2-101 (389)
184 PRK07533 enoyl-(acyl carrier p 96.7 0.028 6.1E-07 51.3 12.1 104 201-306 9-150 (258)
185 PRK08415 enoyl-(acyl carrier p 96.7 0.034 7.4E-07 51.3 12.6 102 201-306 4-145 (274)
186 TIGR02469 CbiT precorrin-6Y C5 96.7 0.038 8.2E-07 43.9 11.4 102 194-304 12-122 (124)
187 PF12847 Methyltransf_18: Meth 96.7 0.0068 1.5E-07 47.5 6.8 92 201-303 1-110 (112)
188 PRK07576 short chain dehydroge 96.6 0.043 9.4E-07 50.2 13.1 78 201-281 8-95 (264)
189 PRK08017 oxidoreductase; Provi 96.6 0.0082 1.8E-07 54.4 8.0 77 203-282 3-84 (256)
190 PRK06180 short chain dehydroge 96.6 0.034 7.3E-07 51.2 12.3 79 201-282 3-88 (277)
191 PRK04148 hypothetical protein; 96.6 0.014 3E-07 47.7 8.3 89 198-296 13-101 (134)
192 PRK06079 enoyl-(acyl carrier p 96.6 0.031 6.7E-07 50.8 11.7 104 201-306 6-145 (252)
193 PRK12828 short chain dehydroge 96.6 0.036 7.9E-07 49.3 11.7 79 201-282 6-92 (239)
194 PRK13944 protein-L-isoaspartat 96.5 0.021 4.6E-07 50.4 9.9 101 193-303 64-172 (205)
195 PRK07063 short chain dehydroge 96.5 0.047 1E-06 49.6 12.6 79 201-282 6-96 (260)
196 PRK07062 short chain dehydroge 96.5 0.059 1.3E-06 49.1 13.0 79 201-282 7-97 (265)
197 PRK06949 short chain dehydroge 96.5 0.015 3.3E-07 52.6 9.0 82 200-282 7-96 (258)
198 PRK06057 short chain dehydroge 96.5 0.014 3.1E-07 53.0 8.7 79 201-282 6-89 (255)
199 PRK08267 short chain dehydroge 96.5 0.035 7.6E-07 50.5 11.3 77 203-282 2-87 (260)
200 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.044 9.4E-07 54.4 12.8 79 201-282 209-294 (450)
201 PRK08589 short chain dehydroge 96.5 0.048 1E-06 50.1 12.3 78 201-282 5-92 (272)
202 PRK08628 short chain dehydroge 96.5 0.048 1E-06 49.5 12.1 81 201-282 6-93 (258)
203 COG1179 Dinucleotide-utilizing 96.5 0.081 1.7E-06 47.3 12.8 104 201-306 29-155 (263)
204 PRK03369 murD UDP-N-acetylmura 96.5 0.014 3E-07 58.7 9.2 74 199-284 9-82 (488)
205 PRK06603 enoyl-(acyl carrier p 96.5 0.05 1.1E-06 49.7 12.2 79 201-282 7-96 (260)
206 PRK08263 short chain dehydroge 96.4 0.043 9.4E-07 50.4 11.8 80 202-282 3-87 (275)
207 PRK07523 gluconate 5-dehydroge 96.4 0.053 1.1E-06 49.1 12.1 79 201-282 9-97 (255)
208 PRK13940 glutamyl-tRNA reducta 96.4 0.018 4E-07 56.4 9.5 76 200-285 179-255 (414)
209 PRK06500 short chain dehydroge 96.4 0.061 1.3E-06 48.3 12.4 79 201-282 5-90 (249)
210 PF00106 adh_short: short chai 96.4 0.045 9.8E-07 45.9 10.9 81 203-283 1-91 (167)
211 PRK06484 short chain dehydroge 96.4 0.048 1E-06 55.1 12.9 103 200-306 267-402 (520)
212 COG0686 Ald Alanine dehydrogen 96.4 0.016 3.4E-07 53.6 8.3 98 201-307 167-271 (371)
213 PRK06179 short chain dehydroge 96.4 0.032 6.9E-07 51.0 10.7 76 202-282 4-83 (270)
214 PRK07060 short chain dehydroge 96.4 0.025 5.5E-07 50.7 9.8 77 201-282 8-87 (245)
215 PRK08618 ornithine cyclodeamin 96.4 0.066 1.4E-06 50.9 12.9 110 198-323 123-238 (325)
216 PRK07832 short chain dehydroge 96.4 0.062 1.3E-06 49.3 12.5 76 204-282 2-88 (272)
217 PRK13942 protein-L-isoaspartat 96.4 0.067 1.5E-06 47.5 12.1 100 193-303 68-175 (212)
218 PRK08085 gluconate 5-dehydroge 96.3 0.085 1.9E-06 47.7 13.0 81 201-282 8-96 (254)
219 PRK12823 benD 1,6-dihydroxycyc 96.3 0.042 9.2E-07 49.9 11.0 79 201-282 7-94 (260)
220 PRK00107 gidB 16S rRNA methylt 96.3 0.037 8.1E-07 48.1 10.0 99 197-304 41-145 (187)
221 PRK12829 short chain dehydroge 96.3 0.018 3.9E-07 52.3 8.5 83 198-283 7-97 (264)
222 cd00755 YgdL_like Family of ac 96.3 0.15 3.2E-06 45.9 14.1 99 202-304 11-134 (231)
223 PRK07890 short chain dehydroge 96.3 0.07 1.5E-06 48.3 12.2 79 201-282 4-92 (258)
224 PRK09242 tropinone reductase; 96.3 0.099 2.2E-06 47.4 13.2 79 201-282 8-98 (257)
225 PRK08594 enoyl-(acyl carrier p 96.3 0.064 1.4E-06 48.9 11.9 102 201-306 6-149 (257)
226 PRK06200 2,3-dihydroxy-2,3-dih 96.3 0.023 4.9E-07 51.8 8.9 81 201-282 5-90 (263)
227 PRK06181 short chain dehydroge 96.3 0.074 1.6E-06 48.3 12.3 77 203-282 2-88 (263)
228 PRK12549 shikimate 5-dehydroge 96.3 0.04 8.6E-07 51.3 10.6 43 201-243 126-168 (284)
229 cd01075 NAD_bind_Leu_Phe_Val_D 96.3 0.085 1.8E-06 46.4 12.1 81 201-295 27-108 (200)
230 PRK05866 short chain dehydroge 96.3 0.026 5.7E-07 52.6 9.4 81 201-282 39-127 (293)
231 PRK09186 flagellin modificatio 96.3 0.063 1.4E-06 48.5 11.7 78 201-281 3-92 (256)
232 PRK05653 fabG 3-ketoacyl-(acyl 96.3 0.074 1.6E-06 47.5 12.1 78 202-282 5-92 (246)
233 PF03446 NAD_binding_2: NAD bi 96.3 0.076 1.7E-06 45.0 11.4 87 204-305 3-95 (163)
234 TIGR03325 BphB_TodD cis-2,3-di 96.3 0.017 3.8E-07 52.6 8.0 79 201-282 4-89 (262)
235 PRK06101 short chain dehydroge 96.2 0.088 1.9E-06 47.3 12.4 75 203-281 2-80 (240)
236 PF01262 AlaDh_PNT_C: Alanine 96.2 0.014 2.9E-07 49.9 6.7 103 201-306 19-141 (168)
237 PRK12429 3-hydroxybutyrate deh 96.2 0.052 1.1E-06 49.0 10.9 81 201-282 3-91 (258)
238 PRK06128 oxidoreductase; Provi 96.2 0.092 2E-06 49.0 12.8 102 201-306 54-193 (300)
239 PRK06841 short chain dehydroge 96.2 0.023 5E-07 51.4 8.5 81 201-282 14-99 (255)
240 PRK07831 short chain dehydroge 96.2 0.029 6.2E-07 51.1 9.1 81 199-282 14-107 (262)
241 PRK07984 enoyl-(acyl carrier p 96.2 0.11 2.3E-06 47.7 12.8 80 201-281 5-93 (262)
242 PRK06398 aldose dehydrogenase; 96.2 0.045 9.8E-07 49.9 10.3 74 201-282 5-82 (258)
243 PRK08159 enoyl-(acyl carrier p 96.2 0.098 2.1E-06 48.2 12.6 81 200-281 8-97 (272)
244 PRK07814 short chain dehydroge 96.2 0.028 6E-07 51.4 8.9 79 201-282 9-97 (263)
245 PRK07502 cyclohexadienyl dehyd 96.2 0.049 1.1E-06 51.2 10.6 91 203-305 7-101 (307)
246 PRK05867 short chain dehydroge 96.1 0.029 6.2E-07 50.8 8.8 79 201-282 8-96 (253)
247 cd01065 NAD_bind_Shikimate_DH 96.1 0.048 1E-06 45.4 9.5 96 200-306 17-118 (155)
248 PRK14967 putative methyltransf 96.1 0.11 2.4E-06 46.4 12.2 98 195-304 30-159 (223)
249 PRK06124 gluconate 5-dehydroge 96.1 0.13 2.9E-06 46.4 13.1 79 201-282 10-98 (256)
250 CHL00194 ycf39 Ycf39; Provisio 96.1 0.07 1.5E-06 50.3 11.5 94 204-306 2-111 (317)
251 TIGR02356 adenyl_thiF thiazole 96.1 0.06 1.3E-06 47.4 10.0 35 201-235 20-54 (202)
252 PRK06196 oxidoreductase; Provi 96.0 0.038 8.3E-07 52.0 9.4 79 201-282 25-109 (315)
253 COG2226 UbiE Methylase involve 96.0 0.093 2E-06 47.3 11.2 112 187-308 36-160 (238)
254 PRK10538 malonic semialdehyde 96.0 0.13 2.9E-06 46.3 12.5 76 204-282 2-84 (248)
255 PRK07677 short chain dehydroge 96.0 0.034 7.3E-07 50.4 8.5 80 202-282 1-88 (252)
256 PRK12937 short chain dehydroge 96.0 0.16 3.5E-06 45.4 12.9 104 201-306 4-141 (245)
257 PRK07985 oxidoreductase; Provi 96.0 0.12 2.5E-06 48.3 12.3 102 201-306 48-187 (294)
258 TIGR01832 kduD 2-deoxy-D-gluco 96.0 0.052 1.1E-06 48.9 9.6 81 201-282 4-90 (248)
259 COG2230 Cfa Cyclopropane fatty 96.0 0.079 1.7E-06 48.8 10.7 105 189-309 60-181 (283)
260 PRK07904 short chain dehydroge 96.0 0.056 1.2E-06 49.2 9.8 83 199-282 5-97 (253)
261 PRK13394 3-hydroxybutyrate deh 96.0 0.1 2.2E-06 47.2 11.6 81 201-282 6-94 (262)
262 COG2264 PrmA Ribosomal protein 96.0 0.06 1.3E-06 50.1 9.9 128 165-306 130-265 (300)
263 PRK12809 putative oxidoreducta 95.9 0.041 8.9E-07 57.2 9.7 77 201-283 309-406 (639)
264 cd05311 NAD_bind_2_malic_enz N 95.9 0.11 2.4E-06 46.6 11.3 109 200-325 23-145 (226)
265 TIGR00080 pimt protein-L-isoas 95.9 0.023 5E-07 50.5 6.9 101 193-303 69-176 (215)
266 PF06325 PrmA: Ribosomal prote 95.9 0.059 1.3E-06 50.3 9.7 95 199-307 159-262 (295)
267 TIGR01318 gltD_gamma_fam gluta 95.9 0.043 9.2E-07 54.9 9.4 78 201-284 140-238 (467)
268 PRK09291 short chain dehydroge 95.9 0.052 1.1E-06 49.1 9.3 74 202-282 2-83 (257)
269 PRK07478 short chain dehydroge 95.9 0.047 1E-06 49.4 9.0 81 201-282 5-93 (254)
270 cd01080 NAD_bind_m-THF_DH_Cycl 95.9 0.083 1.8E-06 45.1 9.8 96 180-306 22-118 (168)
271 PRK06953 short chain dehydroge 95.9 0.063 1.4E-06 47.6 9.5 77 203-282 2-80 (222)
272 COG2910 Putative NADH-flavin r 95.8 0.087 1.9E-06 45.2 9.4 94 204-306 2-106 (211)
273 PRK08340 glucose-1-dehydrogena 95.8 0.054 1.2E-06 49.3 9.1 78 204-282 2-86 (259)
274 PF03435 Saccharop_dh: Sacchar 95.8 0.075 1.6E-06 51.6 10.5 90 205-302 1-96 (386)
275 PLN02780 ketoreductase/ oxidor 95.8 0.051 1.1E-06 51.5 9.1 80 201-282 52-142 (320)
276 PLN00141 Tic62-NAD(P)-related 95.8 0.13 2.7E-06 46.7 11.3 102 201-306 16-133 (251)
277 PRK08063 enoyl-(acyl carrier p 95.8 0.17 3.8E-06 45.4 12.2 81 201-282 3-92 (250)
278 PRK07340 ornithine cyclodeamin 95.8 0.048 1E-06 51.3 8.7 103 200-317 123-229 (304)
279 COG0169 AroE Shikimate 5-dehyd 95.8 0.027 5.9E-07 52.2 6.7 44 201-244 125-168 (283)
280 PRK15116 sulfur acceptor prote 95.7 0.24 5.3E-06 45.5 12.9 103 201-306 29-155 (268)
281 PRK07574 formate dehydrogenase 95.7 0.097 2.1E-06 50.8 10.8 45 201-246 191-235 (385)
282 PRK06484 short chain dehydroge 95.7 0.15 3.3E-06 51.4 12.8 79 201-282 4-89 (520)
283 TIGR01809 Shik-DH-AROM shikima 95.7 0.042 9.2E-07 51.1 8.0 76 201-283 124-201 (282)
284 PRK08217 fabG 3-ketoacyl-(acyl 95.7 0.068 1.5E-06 48.0 9.3 81 201-282 4-92 (253)
285 PF13241 NAD_binding_7: Putati 95.7 0.025 5.3E-07 44.1 5.5 91 201-309 6-96 (103)
286 PRK05875 short chain dehydroge 95.7 0.063 1.4E-06 49.2 9.1 81 201-282 6-96 (276)
287 PRK09072 short chain dehydroge 95.7 0.076 1.6E-06 48.4 9.5 81 201-282 4-90 (263)
288 PRK07454 short chain dehydroge 95.7 0.076 1.7E-06 47.6 9.4 82 200-282 4-93 (241)
289 PRK08261 fabG 3-ketoacyl-(acyl 95.7 0.026 5.7E-07 56.0 6.9 94 195-307 27-126 (450)
290 PRK07370 enoyl-(acyl carrier p 95.7 0.18 3.9E-06 45.9 12.0 102 201-306 5-149 (258)
291 PRK05854 short chain dehydroge 95.7 0.071 1.5E-06 50.2 9.4 79 201-282 13-103 (313)
292 PRK06940 short chain dehydroge 95.7 0.17 3.7E-06 46.6 11.8 99 202-305 2-126 (275)
293 PRK05717 oxidoreductase; Valid 95.7 0.068 1.5E-06 48.4 9.0 79 201-282 9-94 (255)
294 PRK07402 precorrin-6B methylas 95.7 0.21 4.5E-06 43.6 11.7 103 194-305 33-143 (196)
295 PRK14027 quinate/shikimate deh 95.6 0.11 2.5E-06 48.2 10.5 44 200-243 125-168 (283)
296 PRK06194 hypothetical protein; 95.6 0.071 1.5E-06 49.2 9.2 80 202-282 6-93 (287)
297 PF02353 CMAS: Mycolic acid cy 95.6 0.027 5.8E-07 52.1 6.2 98 193-304 54-166 (273)
298 COG0373 HemA Glutamyl-tRNA red 95.6 0.089 1.9E-06 51.2 9.9 96 200-306 176-276 (414)
299 PRK08643 acetoin reductase; Va 95.6 0.07 1.5E-06 48.3 8.9 78 202-282 2-89 (256)
300 PRK00258 aroE shikimate 5-dehy 95.6 0.038 8.2E-07 51.2 7.2 95 200-304 121-221 (278)
301 PRK06138 short chain dehydroge 95.6 0.073 1.6E-06 47.9 9.0 81 201-282 4-91 (252)
302 cd01078 NAD_bind_H4MPT_DH NADP 95.6 0.12 2.5E-06 45.1 9.9 76 201-284 27-109 (194)
303 PRK07066 3-hydroxybutyryl-CoA 95.6 0.16 3.5E-06 48.1 11.4 134 203-349 8-174 (321)
304 PRK06701 short chain dehydroge 95.6 0.25 5.5E-06 45.9 12.8 105 200-306 44-183 (290)
305 TIGR03206 benzo_BadH 2-hydroxy 95.6 0.077 1.7E-06 47.7 9.0 81 201-282 2-90 (250)
306 cd01483 E1_enzyme_family Super 95.5 0.14 3.1E-06 42.2 9.8 92 204-301 1-117 (143)
307 PRK08220 2,3-dihydroxybenzoate 95.5 0.19 4E-06 45.3 11.4 74 201-282 7-86 (252)
308 PRK08219 short chain dehydroge 95.5 0.11 2.4E-06 45.9 9.7 74 203-282 4-81 (227)
309 PRK06197 short chain dehydroge 95.5 0.079 1.7E-06 49.6 9.2 81 201-282 15-105 (306)
310 PLN03139 formate dehydrogenase 95.5 0.1 2.2E-06 50.6 10.1 45 201-246 198-242 (386)
311 PRK07774 short chain dehydroge 95.5 0.086 1.9E-06 47.4 9.1 79 201-282 5-93 (250)
312 PLN02366 spermidine synthase 95.5 0.17 3.6E-06 47.7 11.2 99 199-305 89-207 (308)
313 PRK07035 short chain dehydroge 95.5 0.081 1.8E-06 47.8 8.9 80 202-282 8-95 (252)
314 PRK11207 tellurite resistance 95.5 0.059 1.3E-06 47.2 7.7 99 194-303 23-133 (197)
315 COG2519 GCD14 tRNA(1-methylade 95.5 0.14 3E-06 46.2 10.0 103 194-305 87-196 (256)
316 PRK06077 fabG 3-ketoacyl-(acyl 95.5 0.41 9E-06 42.9 13.5 101 202-306 6-142 (252)
317 PRK07024 short chain dehydroge 95.5 0.09 2E-06 47.7 9.2 78 202-282 2-88 (257)
318 PRK08277 D-mannonate oxidoredu 95.5 0.083 1.8E-06 48.5 9.0 80 201-281 9-96 (278)
319 PRK12747 short chain dehydroge 95.5 0.4 8.6E-06 43.2 13.4 103 201-307 3-147 (252)
320 PRK06125 short chain dehydroge 95.5 0.12 2.7E-06 46.8 10.1 79 201-282 6-91 (259)
321 PRK12769 putative oxidoreducta 95.5 0.072 1.6E-06 55.6 9.4 78 200-283 325-423 (654)
322 PRK12384 sorbitol-6-phosphate 95.4 0.079 1.7E-06 48.0 8.6 80 202-282 2-91 (259)
323 PRK08862 short chain dehydroge 95.4 0.099 2.1E-06 46.8 9.1 80 201-281 4-92 (227)
324 PRK06198 short chain dehydroge 95.4 0.08 1.7E-06 48.0 8.6 80 201-282 5-94 (260)
325 PRK08703 short chain dehydroge 95.4 0.064 1.4E-06 48.1 7.8 81 201-282 5-97 (239)
326 PRK06172 short chain dehydroge 95.4 0.09 2E-06 47.5 8.9 81 201-282 6-94 (253)
327 PRK00811 spermidine synthase; 95.4 0.12 2.6E-06 48.1 9.7 97 200-305 75-192 (283)
328 PRK08213 gluconate 5-dehydroge 95.4 0.098 2.1E-06 47.5 9.1 79 201-282 11-99 (259)
329 PRK08690 enoyl-(acyl carrier p 95.4 0.092 2E-06 48.0 8.9 81 201-282 5-94 (261)
330 PF02254 TrkA_N: TrkA-N domain 95.4 0.55 1.2E-05 36.9 12.3 93 205-304 1-96 (116)
331 PRK08251 short chain dehydroge 95.4 0.11 2.5E-06 46.6 9.4 77 202-281 2-90 (248)
332 PRK06483 dihydromonapterin red 95.4 0.13 2.7E-06 46.0 9.5 78 202-282 2-84 (236)
333 PRK12743 oxidoreductase; Provi 95.3 0.35 7.5E-06 43.8 12.6 80 202-282 2-90 (256)
334 PRK12548 shikimate 5-dehydroge 95.3 0.17 3.7E-06 47.2 10.5 36 201-236 125-160 (289)
335 PRK07453 protochlorophyllide o 95.3 0.099 2.1E-06 49.3 9.1 78 201-281 5-92 (322)
336 PRK13243 glyoxylate reductase; 95.3 0.19 4.1E-06 47.9 11.0 37 201-238 149-185 (333)
337 PF03807 F420_oxidored: NADP o 95.3 0.37 8E-06 36.5 10.8 85 204-303 1-93 (96)
338 PF07991 IlvN: Acetohydroxy ac 95.3 0.27 5.9E-06 41.4 10.5 87 201-304 3-94 (165)
339 PRK14175 bifunctional 5,10-met 95.3 0.16 3.4E-06 47.1 10.1 94 181-306 137-232 (286)
340 PRK07067 sorbitol dehydrogenas 95.3 0.12 2.6E-06 46.8 9.3 80 202-282 6-90 (257)
341 PLN02253 xanthoxin dehydrogena 95.3 0.09 2E-06 48.3 8.6 79 201-282 17-104 (280)
342 PRK12481 2-deoxy-D-gluconate 3 95.3 0.11 2.4E-06 47.1 9.0 79 201-282 7-93 (251)
343 cd00757 ThiF_MoeB_HesA_family 95.3 0.22 4.8E-06 44.7 10.9 90 202-295 21-134 (228)
344 PRK08317 hypothetical protein; 95.3 0.22 4.8E-06 44.3 10.9 102 193-304 11-124 (241)
345 PRK06482 short chain dehydroge 95.3 0.11 2.3E-06 47.8 9.0 77 203-282 3-86 (276)
346 PRK12475 thiamine/molybdopteri 95.3 0.14 3E-06 48.9 9.9 35 202-236 24-58 (338)
347 PRK06463 fabG 3-ketoacyl-(acyl 95.3 0.11 2.3E-06 47.1 8.9 79 201-282 6-89 (255)
348 PRK07074 short chain dehydroge 95.3 0.11 2.4E-06 47.0 9.0 78 202-282 2-87 (257)
349 PRK05884 short chain dehydroge 95.3 0.11 2.5E-06 46.2 8.9 74 204-281 2-78 (223)
350 PRK05855 short chain dehydroge 95.2 0.27 5.9E-06 50.0 12.7 79 201-282 314-402 (582)
351 PRK06914 short chain dehydroge 95.2 0.11 2.4E-06 47.7 9.0 77 202-282 3-91 (280)
352 cd01492 Aos1_SUMO Ubiquitin ac 95.2 0.17 3.6E-06 44.4 9.6 94 201-299 20-136 (197)
353 TIGR01470 cysG_Nterm siroheme 95.2 0.34 7.4E-06 42.8 11.5 93 201-305 8-101 (205)
354 PRK08226 short chain dehydroge 95.2 0.12 2.7E-06 46.9 9.0 81 201-282 5-92 (263)
355 TIGR02355 moeB molybdopterin s 95.2 0.14 3.1E-06 46.4 9.2 35 202-236 24-58 (240)
356 PRK05650 short chain dehydroge 95.2 0.44 9.5E-06 43.5 12.7 78 204-282 2-87 (270)
357 PRK05876 short chain dehydroge 95.2 0.12 2.5E-06 47.7 8.9 81 201-282 5-93 (275)
358 PRK08762 molybdopterin biosynt 95.1 0.22 4.7E-06 48.3 11.0 35 201-235 134-168 (376)
359 PRK08264 short chain dehydroge 95.1 0.11 2.3E-06 46.5 8.3 75 201-282 5-83 (238)
360 PRK06718 precorrin-2 dehydroge 95.1 0.42 9.1E-06 42.1 11.8 92 201-305 9-101 (202)
361 COG0673 MviM Predicted dehydro 95.1 0.46 1E-05 45.0 13.1 133 204-355 5-148 (342)
362 PRK05690 molybdopterin biosynt 95.1 0.19 4.2E-06 45.6 9.9 35 201-235 31-65 (245)
363 PRK06720 hypothetical protein; 95.1 0.18 3.8E-06 43.1 9.1 81 201-282 15-103 (169)
364 PRK15469 ghrA bifunctional gly 95.1 0.16 3.4E-06 48.0 9.6 36 201-237 135-170 (312)
365 PRK07417 arogenate dehydrogena 95.1 0.16 3.5E-06 47.0 9.6 88 204-305 2-92 (279)
366 PRK12938 acetyacetyl-CoA reduc 95.1 0.28 6.1E-06 43.9 11.0 78 202-282 3-91 (246)
367 PF13823 ADH_N_assoc: Alcohol 95.1 0.022 4.8E-07 31.3 2.2 22 17-39 1-22 (23)
368 PRK06114 short chain dehydroge 95.1 0.16 3.4E-06 46.0 9.4 81 201-282 7-96 (254)
369 PRK12367 short chain dehydroge 95.1 0.18 3.8E-06 45.8 9.6 75 201-282 13-89 (245)
370 PRK07856 short chain dehydroge 95.0 0.11 2.4E-06 47.0 8.3 77 201-282 5-85 (252)
371 PRK07688 thiamine/molybdopteri 95.0 0.16 3.5E-06 48.5 9.6 34 202-235 24-57 (339)
372 PRK07666 fabG 3-ketoacyl-(acyl 95.0 0.14 3E-06 45.8 8.8 81 201-282 6-94 (239)
373 COG4122 Predicted O-methyltran 95.0 0.39 8.4E-06 42.7 11.2 105 195-303 53-165 (219)
374 PRK06113 7-alpha-hydroxysteroi 95.0 0.15 3.2E-06 46.2 8.9 79 201-282 10-98 (255)
375 TIGR00872 gnd_rel 6-phosphoglu 95.0 0.56 1.2E-05 43.9 12.9 89 204-305 2-94 (298)
376 PLN00203 glutamyl-tRNA reducta 95.0 0.14 3.1E-06 51.6 9.4 73 202-284 266-341 (519)
377 PRK12936 3-ketoacyl-(acyl-carr 95.0 0.16 3.6E-06 45.3 9.1 81 201-282 5-90 (245)
378 PRK12826 3-ketoacyl-(acyl-carr 95.0 0.15 3.2E-06 45.7 8.9 81 201-282 5-93 (251)
379 TIGR00507 aroE shikimate 5-deh 94.9 0.23 4.9E-06 45.8 10.1 92 200-305 115-215 (270)
380 PRK12746 short chain dehydroge 94.9 0.42 9E-06 43.1 11.7 80 202-282 6-100 (254)
381 PF01209 Ubie_methyltran: ubiE 94.9 0.14 3E-06 46.2 8.3 106 194-309 40-158 (233)
382 PLN03075 nicotianamine synthas 94.9 0.2 4.4E-06 46.7 9.5 99 200-304 122-233 (296)
383 PF01408 GFO_IDH_MocA: Oxidore 94.9 0.59 1.3E-05 36.9 11.2 89 204-305 2-93 (120)
384 PF02670 DXP_reductoisom: 1-de 94.9 0.17 3.7E-06 41.1 7.9 86 205-295 1-113 (129)
385 PRK08993 2-deoxy-D-gluconate 3 94.9 0.2 4.3E-06 45.4 9.4 81 201-282 9-95 (253)
386 TIGR01963 PHB_DH 3-hydroxybuty 94.8 0.16 3.4E-06 45.8 8.7 77 203-282 2-88 (255)
387 KOG1201 Hydroxysteroid 17-beta 94.8 0.11 2.3E-06 48.0 7.4 80 200-282 36-124 (300)
388 PRK08328 hypothetical protein; 94.8 0.16 3.5E-06 45.7 8.5 35 201-235 26-60 (231)
389 TIGR01505 tartro_sem_red 2-hyd 94.8 0.25 5.4E-06 46.0 10.1 71 204-288 1-71 (291)
390 PRK06719 precorrin-2 dehydroge 94.8 0.37 8.1E-06 40.6 10.2 89 201-304 12-100 (157)
391 PRK06935 2-deoxy-D-gluconate 3 94.8 0.18 3.9E-06 45.7 9.0 80 201-282 14-101 (258)
392 PRK07577 short chain dehydroge 94.8 0.12 2.7E-06 45.9 7.7 73 202-282 3-78 (234)
393 PRK08644 thiamine biosynthesis 94.8 0.22 4.8E-06 44.2 9.2 35 201-235 27-61 (212)
394 PRK11559 garR tartronate semia 94.7 0.34 7.3E-06 45.2 10.8 72 204-289 4-75 (296)
395 PRK07889 enoyl-(acyl carrier p 94.7 0.43 9.4E-06 43.4 11.3 101 201-305 6-146 (256)
396 TIGR03840 TMPT_Se_Te thiopurin 94.7 0.26 5.6E-06 43.8 9.5 102 199-305 32-153 (213)
397 PLN02781 Probable caffeoyl-CoA 94.7 0.39 8.5E-06 43.3 10.8 105 194-303 61-177 (234)
398 PF00899 ThiF: ThiF family; I 94.7 0.23 5.1E-06 40.5 8.5 97 202-304 2-123 (135)
399 TIGR00477 tehB tellurite resis 94.6 0.18 3.8E-06 44.1 8.2 99 193-303 22-132 (195)
400 PRK11579 putative oxidoreducta 94.6 1.3 2.8E-05 42.3 14.8 128 203-352 5-142 (346)
401 COG2084 MmsB 3-hydroxyisobutyr 94.6 0.39 8.6E-06 44.5 10.6 88 204-306 2-97 (286)
402 PLN02657 3,8-divinyl protochlo 94.6 0.21 4.5E-06 48.7 9.4 105 198-306 56-183 (390)
403 PLN02233 ubiquinone biosynthes 94.6 0.55 1.2E-05 43.1 11.7 102 195-306 67-184 (261)
404 PRK07069 short chain dehydroge 94.6 0.42 9.1E-06 42.9 10.8 75 205-282 2-89 (251)
405 PF02558 ApbA: Ketopantoate re 94.6 0.11 2.5E-06 43.0 6.6 94 205-303 1-100 (151)
406 COG0031 CysK Cysteine synthase 94.6 1.2 2.6E-05 41.5 13.6 111 195-305 55-202 (300)
407 PF08704 GCD14: tRNA methyltra 94.6 0.1 2.3E-06 47.3 6.7 105 193-305 32-147 (247)
408 PRK07578 short chain dehydroge 94.6 0.71 1.5E-05 40.0 11.9 86 204-306 2-113 (199)
409 PRK06141 ornithine cyclodeamin 94.5 0.49 1.1E-05 44.7 11.4 112 199-325 122-238 (314)
410 KOG4169 15-hydroxyprostaglandi 94.5 0.47 1E-05 42.2 10.3 111 202-314 5-146 (261)
411 KOG1014 17 beta-hydroxysteroid 94.5 0.29 6.3E-06 45.5 9.4 80 200-283 47-137 (312)
412 PRK07097 gluconate 5-dehydroge 94.5 0.25 5.3E-06 45.1 9.2 81 201-282 9-97 (265)
413 PRK12749 quinate/shikimate deh 94.5 0.39 8.4E-06 44.8 10.5 37 201-237 123-159 (288)
414 PLN00016 RNA-binding protein; 94.5 0.36 7.7E-06 46.7 10.7 95 202-305 52-165 (378)
415 PRK07775 short chain dehydroge 94.5 0.23 5E-06 45.6 9.0 81 201-282 9-97 (274)
416 PRK12824 acetoacetyl-CoA reduc 94.5 0.77 1.7E-05 40.9 12.2 79 203-282 3-90 (245)
417 PRK10669 putative cation:proto 94.5 0.26 5.7E-06 50.4 10.1 94 203-303 418-514 (558)
418 PRK01683 trans-aconitate 2-met 94.4 0.52 1.1E-05 42.9 11.2 99 194-304 24-130 (258)
419 PRK08945 putative oxoacyl-(acy 94.4 0.18 3.8E-06 45.4 7.9 84 198-282 8-102 (247)
420 PRK07791 short chain dehydroge 94.4 0.32 7E-06 45.0 9.8 80 200-282 4-102 (286)
421 cd01487 E1_ThiF_like E1_ThiF_l 94.4 0.49 1.1E-05 40.6 10.2 33 204-236 1-33 (174)
422 PRK01581 speE spermidine synth 94.4 0.96 2.1E-05 43.4 12.9 98 199-305 148-269 (374)
423 KOG0725 Reductases with broad 94.4 0.18 3.9E-06 46.6 7.9 80 200-282 6-99 (270)
424 COG0569 TrkA K+ transport syst 94.4 0.37 8E-06 43.2 9.8 75 204-284 2-78 (225)
425 PLN02928 oxidoreductase family 94.4 0.25 5.4E-06 47.3 9.2 35 201-236 158-192 (347)
426 TIGR02354 thiF_fam2 thiamine b 94.3 0.14 3.1E-06 45.0 6.9 34 202-235 21-54 (200)
427 PRK09599 6-phosphogluconate de 94.3 0.65 1.4E-05 43.5 11.8 44 204-248 2-45 (301)
428 PRK13403 ketol-acid reductoiso 94.3 0.55 1.2E-05 44.2 11.0 86 201-303 15-104 (335)
429 PLN02476 O-methyltransferase 94.3 0.52 1.1E-05 43.6 10.8 105 194-303 111-227 (278)
430 PLN02730 enoyl-[acyl-carrier-p 94.3 0.57 1.2E-05 44.0 11.3 39 201-241 8-49 (303)
431 PRK08303 short chain dehydroge 94.3 0.24 5.3E-06 46.5 8.9 34 201-235 7-41 (305)
432 PRK04457 spermidine synthase; 94.3 0.58 1.2E-05 43.0 11.1 95 200-303 65-176 (262)
433 PRK05597 molybdopterin biosynt 94.3 0.31 6.8E-06 46.9 9.7 36 201-236 27-62 (355)
434 COG0499 SAM1 S-adenosylhomocys 94.3 0.22 4.7E-06 47.1 8.2 102 199-320 206-308 (420)
435 PRK07041 short chain dehydroge 94.3 0.75 1.6E-05 40.7 11.7 74 206-282 1-79 (230)
436 PRK11064 wecC UDP-N-acetyl-D-m 94.3 0.49 1.1E-05 46.5 11.2 73 203-283 4-86 (415)
437 PRK00312 pcm protein-L-isoaspa 94.3 0.18 4E-06 44.5 7.5 97 194-303 71-174 (212)
438 PLN02256 arogenate dehydrogena 94.3 0.79 1.7E-05 43.1 12.1 97 193-305 27-128 (304)
439 PRK01438 murD UDP-N-acetylmura 94.3 0.27 6E-06 49.2 9.6 70 201-283 15-89 (480)
440 PRK07102 short chain dehydroge 94.2 0.38 8.1E-06 43.1 9.7 78 203-282 2-86 (243)
441 PRK06523 short chain dehydroge 94.2 0.2 4.4E-06 45.4 8.0 75 201-281 8-86 (260)
442 PRK03562 glutathione-regulated 94.2 0.32 6.9E-06 50.4 10.2 94 202-302 400-496 (621)
443 COG3288 PntA NAD/NADP transhyd 94.2 0.22 4.7E-06 46.2 7.9 133 196-330 158-308 (356)
444 PRK07424 bifunctional sterol d 94.2 0.3 6.5E-06 47.8 9.5 76 201-282 177-255 (406)
445 PRK12550 shikimate 5-dehydroge 94.2 0.21 4.6E-06 46.1 8.1 71 197-282 117-188 (272)
446 PF02737 3HCDH_N: 3-hydroxyacy 94.2 1.3 2.9E-05 38.1 12.6 39 204-243 1-39 (180)
447 PRK12480 D-lactate dehydrogena 94.2 0.49 1.1E-05 45.0 10.7 37 201-238 145-181 (330)
448 PRK12490 6-phosphogluconate de 94.2 0.72 1.6E-05 43.2 11.8 90 204-305 2-95 (299)
449 PRK11036 putative S-adenosyl-L 94.2 1 2.2E-05 41.0 12.5 93 200-303 43-148 (255)
450 PRK05565 fabG 3-ketoacyl-(acyl 94.2 0.29 6.2E-06 43.7 8.8 80 202-282 5-93 (247)
451 COG0287 TyrA Prephenate dehydr 94.2 0.31 6.7E-06 45.2 9.0 90 203-305 4-99 (279)
452 PF01210 NAD_Gly3P_dh_N: NAD-d 94.2 0.36 7.8E-06 40.6 8.8 85 204-295 1-91 (157)
453 PRK14618 NAD(P)H-dependent gly 94.2 0.35 7.7E-06 45.8 9.7 94 203-304 5-104 (328)
454 PLN02244 tocopherol O-methyltr 94.2 0.3 6.4E-06 46.7 9.2 95 200-305 117-224 (340)
455 PRK14188 bifunctional 5,10-met 94.2 0.47 1E-05 44.3 10.2 93 181-306 137-232 (296)
456 PF03721 UDPG_MGDP_dh_N: UDP-g 94.1 0.67 1.4E-05 40.2 10.5 92 204-305 2-120 (185)
457 PRK10206 putative oxidoreducta 94.1 0.71 1.5E-05 44.2 11.7 130 204-352 3-142 (344)
458 PRK03659 glutathione-regulated 94.1 0.35 7.5E-06 50.0 10.2 96 202-304 400-498 (601)
459 PRK14103 trans-aconitate 2-met 94.1 0.72 1.6E-05 42.0 11.3 97 193-303 21-125 (255)
460 KOG1210 Predicted 3-ketosphing 94.0 0.51 1.1E-05 43.9 9.9 85 198-283 29-123 (331)
461 PRK07023 short chain dehydroge 94.0 0.79 1.7E-05 41.0 11.3 75 204-282 3-87 (243)
462 PTZ00098 phosphoethanolamine N 94.0 0.31 6.7E-06 44.8 8.7 105 193-305 44-157 (263)
463 TIGR02992 ectoine_eutC ectoine 94.0 0.67 1.5E-05 44.0 11.2 105 200-318 127-237 (326)
464 TIGR00563 rsmB ribosomal RNA s 94.0 0.61 1.3E-05 46.0 11.3 104 194-305 231-369 (426)
465 PRK06997 enoyl-(acyl carrier p 94.0 0.31 6.8E-06 44.4 8.7 79 201-282 5-94 (260)
466 PRK05557 fabG 3-ketoacyl-(acyl 94.0 0.42 9E-06 42.6 9.4 79 201-282 4-93 (248)
467 cd05211 NAD_bind_Glu_Leu_Phe_V 94.0 0.53 1.2E-05 41.9 9.8 46 201-246 22-77 (217)
468 TIGR03215 ac_ald_DH_ac acetald 93.9 0.54 1.2E-05 43.7 10.1 88 204-303 3-93 (285)
469 TIGR02622 CDP_4_6_dhtase CDP-g 93.9 0.27 5.8E-06 47.0 8.5 77 201-282 3-85 (349)
470 COG1052 LdhA Lactate dehydroge 93.9 0.84 1.8E-05 43.3 11.6 36 201-237 145-180 (324)
471 PRK05447 1-deoxy-D-xylulose 5- 93.9 0.4 8.7E-06 46.2 9.5 98 203-303 2-120 (385)
472 TIGR01289 LPOR light-dependent 93.9 0.34 7.4E-06 45.6 9.1 78 202-282 3-91 (314)
473 PRK00536 speE spermidine synth 93.9 0.31 6.8E-06 44.6 8.4 100 200-306 71-173 (262)
474 PRK06849 hypothetical protein; 93.9 0.49 1.1E-05 46.0 10.4 95 201-296 3-100 (389)
475 PF10727 Rossmann-like: Rossma 93.9 0.24 5.2E-06 40.2 6.8 88 201-303 9-102 (127)
476 PF05368 NmrA: NmrA-like famil 93.9 0.61 1.3E-05 41.6 10.2 85 205-296 1-93 (233)
477 PRK08278 short chain dehydroge 93.9 0.37 7.9E-06 44.3 9.0 79 201-282 5-100 (273)
478 PRK14192 bifunctional 5,10-met 93.9 0.52 1.1E-05 43.8 9.9 82 194-306 150-233 (283)
479 PRK00121 trmB tRNA (guanine-N( 93.8 0.89 1.9E-05 39.9 10.9 96 201-304 40-156 (202)
480 cd01485 E1-1_like Ubiquitin ac 93.8 0.67 1.4E-05 40.7 10.1 34 202-235 19-52 (198)
481 PRK06171 sorbitol-6-phosphate 93.8 0.2 4.3E-06 45.6 7.1 76 201-282 8-87 (266)
482 TIGR02632 RhaD_aldol-ADH rhamn 93.8 0.29 6.3E-06 51.3 9.0 81 201-282 413-503 (676)
483 TIGR02371 ala_DH_arch alanine 93.8 1 2.2E-05 42.8 12.0 105 199-317 125-234 (325)
484 TIGR00417 speE spermidine synt 93.8 1 2.2E-05 41.5 11.8 97 200-305 71-187 (270)
485 PRK12859 3-ketoacyl-(acyl-carr 93.7 1.9 4.2E-05 39.0 13.4 32 201-233 5-39 (256)
486 PRK14903 16S rRNA methyltransf 93.7 1.4 3.1E-05 43.5 13.3 102 195-305 231-367 (431)
487 PRK04266 fibrillarin; Provisio 93.7 1.6 3.5E-05 39.1 12.5 102 195-303 66-175 (226)
488 PRK09135 pteridine reductase; 93.7 0.49 1.1E-05 42.3 9.3 79 201-282 5-95 (249)
489 KOG1610 Corticosteroid 11-beta 93.6 0.72 1.6E-05 43.0 10.2 108 200-310 27-170 (322)
490 PRK08287 cobalt-precorrin-6Y C 93.6 0.93 2E-05 39.1 10.6 99 194-304 24-131 (187)
491 PRK07792 fabG 3-ketoacyl-(acyl 93.6 0.56 1.2E-05 43.9 9.9 81 201-282 11-99 (306)
492 PRK06436 glycerate dehydrogena 93.5 0.41 8.9E-06 45.0 8.7 34 201-235 121-154 (303)
493 PRK08416 7-alpha-hydroxysteroi 93.5 0.48 1.1E-05 43.0 9.0 80 201-281 7-96 (260)
494 PRK15461 NADH-dependent gamma- 93.5 0.76 1.6E-05 43.0 10.5 72 204-289 3-74 (296)
495 COG2227 UbiG 2-polyprenyl-3-me 93.4 0.67 1.4E-05 41.6 9.3 93 200-303 58-160 (243)
496 PLN02986 cinnamyl-alcohol dehy 93.4 0.56 1.2E-05 44.1 9.6 38 201-239 4-42 (322)
497 PRK14194 bifunctional 5,10-met 93.4 0.77 1.7E-05 42.9 10.1 94 181-306 138-233 (301)
498 TIGR02415 23BDH acetoin reduct 93.4 0.52 1.1E-05 42.4 9.0 76 204-282 2-87 (254)
499 PRK06932 glycerate dehydrogena 93.4 0.47 1E-05 44.8 8.9 34 201-235 146-179 (314)
500 PF01564 Spermine_synth: Sperm 93.3 0.46 1E-05 43.2 8.5 98 200-305 75-192 (246)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.4e-61 Score=448.09 Aligned_cols=308 Identities=29% Similarity=0.444 Sum_probs=289.1
Q ss_pred cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
+++|||+++.++++++++++++.|+|+++||+|+|+|+|||++|++.+.|..+...+|++||||.+|+|+++|++|++||
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCEEEe-eCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 94 EGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 94 ~Gd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
+||||.+ +...+|++|++|++++.++|++... .|++.+| +|+||+++++.+++++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCC
Confidence 9999999 9999999999999999999999887 7888888 999999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++++++||.+.|+..|.|+++ +..+++||++|+|.|+|++|.+++|+|+++|+ +|++++++++|++.++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999986 55999999999999999999999999999997 9999999999999999999999999
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
..+ ++..+.+++. +|++||+++ +..++.+++.|+++ |+++++|.........++...++.+++++.|+..+
T Consensus 217 ~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g 287 (339)
T COG1064 217 SSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVG 287 (339)
T ss_pred cCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecC
Confidence 776 6777777764 999999999 88899999999998 99999998532344568888899999999999887
Q ss_pred CCCccccHHHHHHHHHcCCccccee
Q 018022 333 GLKAKSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g~l~~~~~ 357 (362)
+ +.|+++++++..+|+++|.+.
T Consensus 288 ~---~~d~~e~l~f~~~g~Ikp~i~ 309 (339)
T COG1064 288 T---RADLEEALDFAAEGKIKPEIL 309 (339)
T ss_pred C---HHHHHHHHHHHHhCCceeeEE
Confidence 6 699999999999999999995
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=9.8e-60 Score=427.08 Aligned_cols=336 Identities=43% Similarity=0.760 Sum_probs=321.6
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
|++||++++++++||+++++.+++|++|||+||+.++|+|++|...++|..|.. +|.++|||.+|+|++||++|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 578999999999999999999999999999999999999999999999998877 9999999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+....-.|++|.+|.+++.|+|.....+.+.|...||.++|+ ..|..+.|+++.++|+||.++++.+++++++..
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999999999999999999999999998888888999999999999 888899999999999999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
+++.++++.|...|.+.+..+.+++++|++|.|+|.|.+|++++|-|+..|+.+||+++.+++|++++++||+++++|++
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCc-cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022 255 NCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 255 ~~~~~-~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
+ . ++.+.+.+++++|+|++|||+|+...+++++.++.++ |+.+++|.....+.+++++..+... .+|.|+++++
T Consensus 239 ~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~ 313 (366)
T COG1062 239 E---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGG 313 (366)
T ss_pred h---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeecc-ceEEEEeecC
Confidence 7 4 6999999999999999999999999999999999995 9999999988888888998888885 9999999999
Q ss_pred CCccccHHHHHHHHHcCCccccee
Q 018022 334 LKAKSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~~~~ 357 (362)
...+.|++++++++.+|+|++.-.
T Consensus 314 ~~p~~diP~lv~~y~~Gkl~~d~l 337 (366)
T COG1062 314 ARPRSDIPRLVDLYMAGKLPLDRL 337 (366)
T ss_pred CccccchhHHHHHHHcCCCchhHH
Confidence 999999999999999999987543
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-58 Score=411.43 Aligned_cols=346 Identities=53% Similarity=0.909 Sum_probs=326.4
Q ss_pred CCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCC
Q 018022 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD 90 (362)
Q Consensus 11 ~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~ 90 (362)
..++.++||++.+++++||.+||+.+++|+.+||+||++++++|++|...+.|..+...+|.++|||++|+|+.+|.+|+
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 45788999999999999999999999999999999999999999999999999987788999999999999999999999
Q ss_pred CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (362)
Q Consensus 91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~ 169 (362)
+|++||+|+......|+.|.+|.++..|+|.......+.+. ..||.+||+ --|+.+.|+++..+|+||.+++...+++
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEe
Confidence 99999999999999999999999999999999888865455 469999999 8899999999999999999999999999
Q ss_pred cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
+++..+++.++++.|.+.|+|.+.++.+++++|+++.|+|.|.+|+++++-||+.|+.+||++|.|++|.+.+++||+++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (362)
Q Consensus 250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (362)
.+|+.+ ......+.+++++++|+|+.|||+|+.+++++++.++..+||+-+++|.....+.+++.++.++. +.++.|+
T Consensus 241 ~iNp~d-~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs 318 (375)
T KOG0022|consen 241 FINPKD-LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGS 318 (375)
T ss_pred ecChhh-ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEE
Confidence 999984 33458899999999999999999999999999999999999999999998888899999988877 9999999
Q ss_pred eccCCCccccHHHHHHHHHcCCcccceecc
Q 018022 330 LFGGLKAKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
.++.++.+++++.+++.+.++++++...-+
T Consensus 319 ~FGG~K~~~~iP~lV~~y~~~~l~ld~~IT 348 (375)
T KOG0022|consen 319 AFGGFKSKSDIPKLVKDYMKKKLNLDEFIT 348 (375)
T ss_pred ecccccchhhhhHHHHHHHhCccchhhhhh
Confidence 999999999999999999999998765433
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-54 Score=390.22 Aligned_cols=313 Identities=26% Similarity=0.411 Sum_probs=278.5
Q ss_pred ceeeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVD 90 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~ 90 (362)
..|+|+++.++++ ++++++|.|++ .|+||+|++.++|||+||+++|...... .+.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4699999999999 99999999987 9999999999999999999999877654 35799999999999999999999
Q ss_pred CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (362)
Q Consensus 91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~ 169 (362)
++|+||||++.|..+|..|.+|++++||+|+...|. +. ..+| ++++|++.+++++++
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G-------------------~la~y~~~~~dfc~K 139 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG-------------------TLAEYYVHPADFCYK 139 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC-------------------ceEEEEEechHheee
Confidence 999999999999999999999999999999999983 22 3455 999999999999999
Q ss_pred cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
||++++++++|++. +++++|++. +++++++|++|||+|||++|+.+...|+++|+.+|++++..+.|+++++++|++.
T Consensus 140 LPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~ 217 (354)
T KOG0024|consen 140 LPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV 217 (354)
T ss_pred CCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence 99999999999999 799999985 8899999999999999999999999999999999999999999999999999998
Q ss_pred EEcCCCCC-CccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022 250 FVNSKNCG-DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (362)
Q Consensus 250 vv~~~~~~-~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 327 (362)
+.+..... .+++.+.+.+..+. .+|++|||+|....++.++..++.+ |++++.|+- ....+++..++..|++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLR 294 (354)
T ss_pred EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeee
Confidence 77655411 13344555555554 6999999999999999999999998 999999873 3567899999999999999
Q ss_pred EeeccCCCccccHHHHHHHHHcCCcccceec
Q 018022 328 GSLFGGLKAKSDIPILLKRYMDKWSYVPFSG 358 (362)
Q Consensus 328 g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~ 358 (362)
|++-+ ...+++.+++++++|++++...-
T Consensus 295 g~fry---~~~~y~~ai~li~sGki~~k~lI 322 (354)
T KOG0024|consen 295 GSFRY---CNGDYPTAIELVSSGKIDVKPLI 322 (354)
T ss_pred eeeee---ccccHHHHHHHHHcCCcCchhhe
Confidence 99733 25699999999999999887543
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.2e-53 Score=377.50 Aligned_cols=323 Identities=26% Similarity=0.385 Sum_probs=288.8
Q ss_pred CCCCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCC
Q 018022 10 TAGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGE 87 (362)
Q Consensus 10 ~~~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~ 87 (362)
+...|.+++++.+..++.. +++.+++.|+|+++||+|+|+|+|||++|++.+.|..+..++|+++|||.+|+|+++|+
T Consensus 3 ~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs 82 (360)
T KOG0023|consen 3 SMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGS 82 (360)
T ss_pred cccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECC
Confidence 3457888999999999984 66699999999999999999999999999999999998899999999999999999999
Q ss_pred CCCCCCCCCEE-EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc
Q 018022 88 NVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH 166 (362)
Q Consensus 88 ~v~~~~~Gd~V-~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~ 166 (362)
+|++|++|||| +-+-..+|.+|++|..+..++|++..++ ..|...|| +...|+|++|+++++.+
T Consensus 83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DG--------------t~~~ggf~~~~~v~~~~ 147 (360)
T KOG0023|consen 83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDG--------------TITQGGFQEYAVVDEVF 147 (360)
T ss_pred CcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCC--------------CCccCccceeEEEeeee
Confidence 99999999999 5566788999999999999999975443 46777888 66678999999999999
Q ss_pred eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhc
Q 018022 167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRF 245 (362)
Q Consensus 167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~ 245 (362)
++++|+++++++||.+.|+..|.|..| ...++.||+++.|.|+|++|.+++|+||++|. +|+++++.+ .|.+.++.+
T Consensus 148 a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L 225 (360)
T KOG0023|consen 148 AIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL 225 (360)
T ss_pred EEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc
Confidence 999999999999999999999999986 77888999999999997799999999999999 999999988 566677789
Q ss_pred CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (362)
Q Consensus 246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 325 (362)
|++.+++..+ ++++.+++.+.+++++|.+.+. ....++.++.+++.+ |++|++|.. .. ++.++...+..+.+.
T Consensus 226 GAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p-~~-~~~~~~~~lil~~~~ 298 (360)
T KOG0023|consen 226 GADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLP-EK-PLKLDTFPLILGRKS 298 (360)
T ss_pred CcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCc-CC-cccccchhhhcccEE
Confidence 9999998874 3899999999988888888876 556689999999998 999999984 33 788999999999999
Q ss_pred EEEeeccCCCccccHHHHHHHHHcCCcccceecc
Q 018022 326 LMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
|.|+..++. .+.+++|++..++.+++++..+
T Consensus 299 I~GS~vG~~---ket~E~Ldf~a~~~ik~~IE~v 329 (360)
T KOG0023|consen 299 IKGSIVGSR---KETQEALDFVARGLIKSPIELV 329 (360)
T ss_pred EEeeccccH---HHHHHHHHHHHcCCCcCceEEE
Confidence 999999984 7889999999999988887643
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.7e-50 Score=388.90 Aligned_cols=338 Identities=35% Similarity=0.587 Sum_probs=284.9
Q ss_pred eeEEEeccCCC--------ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCC
Q 018022 17 CRAAIATAPGE--------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (362)
Q Consensus 17 ~ka~~~~~~~~--------~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~ 88 (362)
|||+++.++|+ .++++++|.|+|+++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 79999998763 389999999999999999999999999999999988653 356899999999999999999
Q ss_pred CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceE
Q 018022 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (362)
Q Consensus 89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~ 168 (362)
+++|++||||++.+..+|+.|..|+.+++++|++.......|...+|...+....+.. .+..+.|+|+||+.++.++++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~-~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEI-NHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCccc-ccccCcccceeeEEecccceE
Confidence 9999999999998888999999999999999988654322332222211110000000 001123599999999999999
Q ss_pred EcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (362)
Q Consensus 169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~ 248 (362)
++|+++++++++++++.+.|||+++.+..++++|++|||.|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999989999999887888999999999999999999999999999997799999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022 249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (362)
Q Consensus 249 ~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 328 (362)
+++++.+ +++.+.+++++++++|++|||+|....+..+++.++++ |+++.+|.......++++...++.|++++.|
T Consensus 239 ~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 239 ATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred eEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 9999877 77888888887668999999999887799999999997 9999999754334567888889999999999
Q ss_pred eeccCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022 329 SLFGGLKAKSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 329 ~~~~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
++.+.+...++++++++++++|++++. ++.+|
T Consensus 315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~ 348 (371)
T cd08281 315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRL 348 (371)
T ss_pred EecCCCChHHHHHHHHHHHHcCCCCchhheeeee
Confidence 988766556789999999999999863 45444
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4e-50 Score=388.98 Aligned_cols=349 Identities=49% Similarity=0.878 Sum_probs=284.0
Q ss_pred CCCCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCC
Q 018022 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGEN 88 (362)
Q Consensus 10 ~~~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~ 88 (362)
+.++|++|||+++.++++++.+++++.|.|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++
T Consensus 4 ~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~ 83 (381)
T PLN02740 4 TQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG 83 (381)
T ss_pred ccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence 3467889999999999877899999999999999999999999999999999887532 457999999999999999999
Q ss_pred CCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCCcccccc-CCceecccccccceeeeEEeecCc
Q 018022 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDL-RGETIHHFVSVSSFSEYTVLDIAH 166 (362)
Q Consensus 89 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~-~~~~~~~~~~~g~~a~y~~v~~~~ 166 (362)
+++|++||||++.+..+|+.|..|+.++++.|++....+..+ ...+|..++... .+....+....|+|+||++++.++
T Consensus 84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~ 163 (381)
T PLN02740 84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC 163 (381)
T ss_pred CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence 999999999999999999999999999999999866421110 000110000000 000001112246999999999999
Q ss_pred eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022 167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (362)
Q Consensus 167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g 246 (362)
++++|++++.++++.+.+++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|
T Consensus 164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~G 243 (381)
T PLN02740 164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMG 243 (381)
T ss_pred eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcC
Confidence 99999999999999999999999998778889999999999999999999999999999967999999999999999999
Q ss_pred CcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 018022 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL 326 (362)
Q Consensus 247 ~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i 326 (362)
+++++++++ ...++.+.+++++++++|++||++|.+..+..++.++++++|+++.+|.......++++...++ +++++
T Consensus 244 a~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i 321 (381)
T PLN02740 244 ITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSI 321 (381)
T ss_pred CcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeE
Confidence 999998765 1124778888877668999999999988899999999883399999998543333455554444 68999
Q ss_pred EEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022 327 MGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR 360 (362)
Q Consensus 327 ~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~ 360 (362)
.|++.+.+....+++++++++.+|++++ .++.+|
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~ 357 (381)
T PLN02740 322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHEL 357 (381)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEe
Confidence 9998776655578999999999999876 355554
No 8
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.5e-49 Score=381.85 Aligned_cols=330 Identities=32% Similarity=0.550 Sum_probs=281.8
Q ss_pred eeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 16 ~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
+|||+++++++++++++++|.|+|+++||+|||.+++||++|+..+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 599999999998899999999999999999999999999999999888643 3478999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
|+|++.+..+|+.|..|..++.++|...... ...... +| ...+.....|+|+||+.+++++++++|+++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~ 149 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG---------TELSPALGIGAFAEKTLVHAGQCTKVDPAA 149 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC---------cccccccccccccceEEEehhheEECCCCC
Confidence 9999999999999999999999999753210 000000 01 000001123599999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
++++++++.+.+.++|+++.+...+++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++.
T Consensus 150 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~ 229 (358)
T TIGR03451 150 DPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS 229 (358)
T ss_pred ChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC
Confidence 99999999989999998877888899999999999999999999999999996799999999999999999999999987
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
+ .++.+.+.+.+++ ++|++|||+|++..++.+++.++++ |+++.+|........++++..++.+++++.+++.+.
T Consensus 230 ~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 305 (358)
T TIGR03451 230 G---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGD 305 (358)
T ss_pred C---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCC
Confidence 6 6788888888887 8999999999987799999999997 999999985433346678778888999999987654
Q ss_pred CCccccHHHHHHHHHcCCcccc--eeccc
Q 018022 334 LKAKSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
....++++++++++++|+|++. ++.+|
T Consensus 306 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~ 334 (358)
T TIGR03451 306 CLPERDFPMLVDLYLQGRLPLDAFVTERI 334 (358)
T ss_pred CCcHHHHHHHHHHHHcCCCCchheEEEEe
Confidence 4346789999999999999763 56655
No 9
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.6e-48 Score=376.00 Aligned_cols=341 Identities=44% Similarity=0.804 Sum_probs=278.0
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++..+++.++++++|.|+|.++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 89999999887799999999999999999999999999999999988765556799999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
||++.+..+|++|.+|+.++.++|.+.......|...+|..++. ..|....+..+.|+|+||+.+|.++++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 99999999999999999999999987543222233222211100 00000001112369999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
++++++++++.+||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.+
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~- 239 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND- 239 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-
Confidence 9999999999999998878889999999999999999999999999999978999999999999999999999998763
Q ss_pred CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 336 (362)
...++.+.+++++++++|++|||+|++..+..+++++++++|+++.+|.......++++...++. +..+.|++.+....
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 318 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKG 318 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCc
Confidence 12456677888776689999999998877899999998733999999985433344555555554 55678876654444
Q ss_pred cccHHHHHHHHHcCCcccc--eeccc
Q 018022 337 KSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 337 ~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
+.+++++++++++|++++. ++.+|
T Consensus 319 ~~~~~~~~~~~~~g~i~~~~~it~~~ 344 (368)
T TIGR02818 319 RTELPGIVEQYMKGEIALDDFVTHTM 344 (368)
T ss_pred HHHHHHHHHHHHCCCCCchhheeEEe
Confidence 5789999999999998653 55554
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.8e-48 Score=374.39 Aligned_cols=342 Identities=45% Similarity=0.845 Sum_probs=281.6
Q ss_pred eeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 16 ~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
+|||+++.+++++++++++|.|.|+++||+|||++++||++|+..+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 69999999888779999999999999999999999999999999998876655789999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|+..+..+|+.|.+|+.++++.|++.....+.|...+|..++. ..|....+..+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 999999999999999999999999987653222233222211110 0010111112246999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
+++++++++++.+||+++.+...+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999899999998878889999999999999999999999999999977999999999999999999999998875
Q ss_pred CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (362)
.++++.+.+++++++++|++||++|+...+..+++++++++|+++.+|...+...+.++...++. +..+.|+..+.+.
T Consensus 241 -~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 318 (368)
T cd08300 241 -HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVT-GRVWKGTAFGGWK 318 (368)
T ss_pred -cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhh-cCeEEEEEecccC
Confidence 11257788888877689999999998877999999998733999999975332334455554544 5677887776666
Q ss_pred ccccHHHHHHHHHcCCcccc--eeccc
Q 018022 336 AKSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 336 ~~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
.+++++++++++++|+|++. ++.+|
T Consensus 319 ~~~~~~~~~~~~~~g~l~~~~~i~~~~ 345 (368)
T cd08300 319 SRSQVPKLVEDYMKGKIKVDEFITHTM 345 (368)
T ss_pred cHHHHHHHHHHHHcCCCChhhceeeeE
Confidence 67889999999999999864 55554
No 11
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.2e-48 Score=375.32 Aligned_cols=343 Identities=51% Similarity=0.921 Sum_probs=282.5
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
|+|||+++.++++++++++++.|+|+++||+|||.+++||++|+..+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 47999999998877999999999999999999999999999999999887665677999999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
||||++.+..+|++|..|..++++.|.+.......|... ++...+. ..|....+....|+|+||+.++..+++++|++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 999999999999999999999999999865321122211 1100000 00000001112368999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+++++++++++.+.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~ 239 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNP 239 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcc
Confidence 99999999998999999988888899999999999999999999999999998789999999999999999999999987
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
.+ ..+++.+.+++++++++|++||++|....+..+++++++++|+++.+|.......+++++..++ +++++.|++.+.
T Consensus 240 ~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 317 (369)
T cd08301 240 KD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGG 317 (369)
T ss_pred cc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCC
Confidence 64 1134667788777668999999999987789999999992289999998654345566655554 689999998877
Q ss_pred CCccccHHHHHHHHHcCCcccc--eeccc
Q 018022 334 LKAKSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
+..+++++++++++.+|++++. ++.+|
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~ 346 (369)
T cd08301 318 YKPKTDLPNLVEKYMKKELELEKFITHEL 346 (369)
T ss_pred CChHHHHHHHHHHHHcCCCCcHHheeeee
Confidence 7656789999999999998764 45444
No 12
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.6e-48 Score=372.42 Aligned_cols=312 Identities=28% Similarity=0.355 Sum_probs=263.1
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCc-cccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR-ILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~-~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|+|++++.++...++++.+.|.+.++||+|||.++|||+||++.+.+..+..+.|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 67888888776455888888878999999999999999999999999877766666 99999999999999 77889999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCC--CCCCCCCCccccccCCceecccccccceeeeEEeecCceEE-cCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKIS--PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK-VDP 172 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~--~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~-~P~ 172 (362)
|||++.|..+|++|.+|+.++++.|++..+... .+...+| +|+||+.+|.++.+. +|+
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G-------------------~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG-------------------GFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC-------------------ceEEEEEeccccCeecCCC
Confidence 999999999999999999999999996654211 1111344 999999999755555 588
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEE
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV 251 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv 251 (362)
+++.+.+++.. +++++|++.......+++++|+|+|+|++|++++++++..|+.+||+++.+++|++++++ .+++.++
T Consensus 141 ~~~~~~aal~e-pla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~ 219 (350)
T COG1063 141 GIDEEAAALTE-PLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV 219 (350)
T ss_pred CCChhhhhhcC-hhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence 88555555555 999998875566666677799999999999999999999999999999999999999999 6677777
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (362)
+..+ ++....+.+++++ ++|++|||+|.+.+++++++.++++ |+++++|.+..... .++...++.|++++.|++
T Consensus 220 ~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~ 294 (350)
T COG1063 220 NPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSL 294 (350)
T ss_pred cCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEecc
Confidence 7665 4678888899988 9999999999999999999999998 99999999754433 677888999999999985
Q ss_pred ccCCCccccHHHHHHHHHcCCcccce
Q 018022 331 FGGLKAKSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 331 ~~~~~~~~~l~~~l~~~~~g~l~~~~ 356 (362)
.. ....+++.+++++++|++++..
T Consensus 295 ~~--~~~~~~~~~~~ll~~g~i~~~~ 318 (350)
T COG1063 295 RP--SGREDFERALDLLASGKIDPEK 318 (350)
T ss_pred CC--CCcccHHHHHHHHHcCCCChhH
Confidence 32 2357899999999999999873
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.7e-47 Score=370.02 Aligned_cols=338 Identities=47% Similarity=0.873 Sum_probs=275.0
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
..|||+++.++++.++++++|.|+|+++||+|||.++|||++|+..+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 469999999988669999999999999999999999999999999887642 46889999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
||+|++.+..+|++|.+|+.+++++|++.... ..|... ++...+. ..|....++-..|+|+||+.+|...++++|++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~ 165 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPL 165 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCcccccccccccceeeEEechhheEECCCC
Confidence 99999999999999999999999999874321 011100 0000000 00000000001259999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+++++++.+.+.+.++|+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++
T Consensus 166 l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~ 245 (378)
T PLN02827 166 APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245 (378)
T ss_pred CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence 99999999888889999877777889999999999999999999999999999779999999999999999999999987
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH-HHHHhcCcEEEEeecc
Q 018022 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILMGSLFG 332 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 332 (362)
++ .++++.+.+++++++++|++||++|.+..+..+++.+++++|+++.+|..... ..+++ ..++.+++++.|++.+
T Consensus 246 ~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
T PLN02827 246 ND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFG 322 (378)
T ss_pred cc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecC
Confidence 64 11357777888776689999999999877899999999933999999985432 33433 3577789999999877
Q ss_pred CCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022 333 GLKAKSDIPILLKRYMDKWSYV--PFSGTR 360 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g~l~~--~~~~~~ 360 (362)
.+....+++++++++++|+|++ .++.+|
T Consensus 323 ~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~ 352 (378)
T PLN02827 323 GWKPKSDLPSLVDKYMNKEIMIDEFITHNL 352 (378)
T ss_pred CCchhhhHHHHHHHHHcCCCChHHheEEEe
Confidence 6655678999999999999998 566665
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.5e-47 Score=365.04 Aligned_cols=310 Identities=27% Similarity=0.392 Sum_probs=270.5
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++.+++. +++++++.|+|+++||+|||.+++||++|+..+.+.+.. ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998876 999999999999999999999999999999988776432 3358999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|++.+..+|+.|..|+.+++++|.+... .+|...+| +|+||+.++.++++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999987653 23444445 999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
+++++++++++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999986 6678899999999999999999999999999955999999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccC-HHHHHhcCcEEEEeeccC
Q 018022 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS-SFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~ 333 (362)
.+ .+.+.+++++ ++|++|||+|+...+..+++.++++ |+++++|... .. +++ ...++.+++++.|++.+.
T Consensus 218 ---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~--~~~~~~~~~~~~~~i~g~~~~~ 289 (339)
T cd08239 218 ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG-EL--TIEVSNDLIRKQRTLIGSWYFS 289 (339)
T ss_pred ---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC-Cc--ccCcHHHHHhCCCEEEEEecCC
Confidence 55 6777777777 8999999999988778999999997 9999999743 22 233 346778999999987653
Q ss_pred CCccccHHHHHHHHHcCCccc--ceeccc
Q 018022 334 LKAKSDIPILLKRYMDKWSYV--PFSGTR 360 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~--~~~~~~ 360 (362)
.++++++++++++|++++ .++.+|
T Consensus 290 ---~~~~~~~~~~~~~g~i~~~~~i~~~~ 315 (339)
T cd08239 290 ---VPDMEECAEFLARHKLEVDRLVTHRF 315 (339)
T ss_pred ---HHHHHHHHHHHHcCCCChhHeEEEEe
Confidence 478999999999999875 455544
No 15
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=5.1e-47 Score=365.27 Aligned_cols=340 Identities=48% Similarity=0.883 Sum_probs=282.1
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
+.|||+++.+.++.++++++|.|.++++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4689999998887799999999999999999999999999999999988654 467899999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+..+..+|++|..|..++.++|++.... ..|...++..++.. .|+...+..+.|+|+||+.++.++++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999999999999999999999999986542 22333333222211 01111112234699999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
++++++++++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|++.++++|++++++++
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999877888999999999999999999999999999997899999999999999999999999876
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
+ ...++.+.+++++++++|++||++|....+..+++++++++|+++.+|... ....++++..++. ++++.|++++.+
T Consensus 238 ~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~-~~~i~g~~~~~~ 314 (365)
T cd08277 238 D-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLIL-GRTWKGSFFGGF 314 (365)
T ss_pred c-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhh-CCEEEeeecCCC
Confidence 5 112456777777766899999999988778999999987339999999853 2345666666665 899999988776
Q ss_pred CccccHHHHHHHHHcCCccc--ceeccc
Q 018022 335 KAKSDIPILLKRYMDKWSYV--PFSGTR 360 (362)
Q Consensus 335 ~~~~~l~~~l~~~~~g~l~~--~~~~~~ 360 (362)
..+.++++++++++++++++ .++.+|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (365)
T cd08277 315 KSRSDVPKLVSKYMNKKFDLDELITHVL 342 (365)
T ss_pred ChHHHHHHHHHHHHCCCcChhHheeeEE
Confidence 55678999999999998764 455554
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-47 Score=362.96 Aligned_cols=307 Identities=21% Similarity=0.333 Sum_probs=259.4
Q ss_pred cceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhh-cCCC--CCCCCccccccceEEEEEeCCCCC
Q 018022 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVD 90 (362)
Q Consensus 14 ~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~vG~~v~ 90 (362)
...+||++++++++ +++++++.| +.++||||||.++|||++|++.+. |... ...+|.++|||++|+|+++ +++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 35689999999988 999999987 689999999999999999999875 3322 2357999999999999999 688
Q ss_pred CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-----CCCCCccccccCCceecccccccceeeeEEeecC
Q 018022 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-----PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (362)
Q Consensus 91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-----~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~ 165 (362)
+|++||||++.+..+|+.|.+|..+++++|++..+ .|. ..+ |+|+||++++++
T Consensus 78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~~~~~-------------------G~~aey~~v~~~ 135 (343)
T PRK09880 78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYFPHVD-------------------GGFTRYKVVDTA 135 (343)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccccCCCC-------------------CceeeeEEechH
Confidence 99999999999999999999999999999988654 221 123 499999999999
Q ss_pred ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc
Q 018022 166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (362)
Q Consensus 166 ~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~ 245 (362)
.++++|++++++++++.. ++++||+++ ......+|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++
T Consensus 136 ~~~~~P~~l~~~~aa~~~-~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l 213 (343)
T PRK09880 136 QCIPYPEKADEKVMAFAE-PLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM 213 (343)
T ss_pred HeEECCCCCCHHHHHhhc-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc
Confidence 999999999988766544 778999986 455667899999999999999999999999997899999999999999999
Q ss_pred CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (362)
Q Consensus 246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 325 (362)
|+++++++++ +++.+.. +. .+++|++|||+|.+..++.+++.++++ |+++.+|... ...++++..++.|+++
T Consensus 214 Ga~~vi~~~~---~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~ 285 (343)
T PRK09880 214 GADKLVNPQN---DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG--APPEFPMMTLIVKEIS 285 (343)
T ss_pred CCcEEecCCc---ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC--CCCccCHHHHHhCCcE
Confidence 9999999876 4544322 22 236999999999987789999999997 9999999743 2356788888899999
Q ss_pred EEEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022 326 LMGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR 360 (362)
Q Consensus 326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~ 360 (362)
+.|++.. .++++++++++++|+|++ .++.+|
T Consensus 286 i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~ 318 (343)
T PRK09880 286 LKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEY 318 (343)
T ss_pred EEEEeec----cccHHHHHHHHHcCCCCchhheEEEE
Confidence 9998642 478999999999999986 344444
No 17
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.4e-47 Score=361.78 Aligned_cols=293 Identities=25% Similarity=0.324 Sum_probs=260.0
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcC-CCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~-~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++...+.+ ++++++|.|+|+++||||||.++|||+.|...+.|. .+..++|++||.|++|+|+++|++|++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999998866 889999999999999999999999999999999987 33457899999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||||+..+ ..| .+ |+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~~--------------------------~~-------------------G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GVG--------------------------RD-------------------GGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CCC--------------------------CC-------------------CcceeEEEecHHHceeCCCC
Confidence 999998653 000 12 49999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
+++++||++++++.|||+++....++++|++|||+|+ |++|.+++|+||++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999986 9999999999999998 6666666778777999999999999
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
+++ +++.+.+++++++ ++|+|||++|++. +..++++|+++ |+++.+|...+....+++...++.+++...|...
T Consensus 194 y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~ 268 (326)
T COG0604 194 YRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTL 268 (326)
T ss_pred CCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecc
Confidence 988 7899999999999 9999999999987 88899999998 9999999864345667778888888999999876
Q ss_pred cCC---CccccHHHHHHHHHcCCcccceecccC
Q 018022 332 GGL---KAKSDIPILLKRYMDKWSYVPFSGTRA 361 (362)
Q Consensus 332 ~~~---~~~~~l~~~l~~~~~g~l~~~~~~~~~ 361 (362)
... ...+.++++.+++++|+|++.++.+|.
T Consensus 269 ~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~ 301 (326)
T COG0604 269 GSRDPEALAEALAELFDLLASGKLKPVIDRVYP 301 (326)
T ss_pred eecchHHHHHHHHHHHHHHHcCCCcceeccEec
Confidence 644 124668889999999999999998763
No 18
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.7e-46 Score=359.47 Aligned_cols=313 Identities=23% Similarity=0.325 Sum_probs=264.4
Q ss_pred CCcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (362)
Q Consensus 12 ~~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~ 91 (362)
.-||+++++.+.+..+.+++.+++.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 46788888888888777999999999999999999999999999999999876554567999999999999999999999
Q ss_pred CCCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCC-C---CCCCCCCCccccccCCceecccccccceeeeEEeecCc
Q 018022 92 VVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKI-S---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH 166 (362)
Q Consensus 92 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~-~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~ 166 (362)
|++||+|++.+. .+|++|.+|+.+++++|++..+.. . .|...+| +|+||+++|.++
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~ 148 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYG-------------------GYSDMIVVDQHF 148 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCC-------------------ccceEEEEchHH
Confidence 999999986654 579999999999999999765320 0 1222234 999999999999
Q ss_pred eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHhc
Q 018022 167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRF 245 (362)
Q Consensus 167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~ 245 (362)
++++|+++++++++.+.+.+.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++
T Consensus 149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~ 227 (360)
T PLN02586 149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227 (360)
T ss_pred eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence 999999999999999999999999987666667899999999999999999999999999 77777766655 4566889
Q ss_pred CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (362)
Q Consensus 246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 325 (362)
|+++++++.+ . +.+++.++ ++|++||++|....++.++++++++ |+++.+|... ...++++..++.+++.
T Consensus 228 Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~ 297 (360)
T PLN02586 228 GADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRKL 297 (360)
T ss_pred CCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCeE
Confidence 9999998765 2 34555544 6999999999887789999999998 9999999753 2456788888888888
Q ss_pred EEEeeccCCCccccHHHHHHHHHcCCccccee
Q 018022 326 LMGSLFGGLKAKSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~ 357 (362)
+.|++.++ .++++++++++++|+|++.++
T Consensus 298 i~g~~~~~---~~~~~~~~~li~~g~i~~~~~ 326 (360)
T PLN02586 298 VGGSDIGG---IKETQEMLDFCAKHNITADIE 326 (360)
T ss_pred EEEcCcCC---HHHHHHHHHHHHhCCCCCcEE
Confidence 88887553 478999999999999998764
No 19
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.4e-45 Score=357.90 Aligned_cols=314 Identities=23% Similarity=0.307 Sum_probs=252.6
Q ss_pred eeEEEeccCCCceEEEEeecCCCC-------CCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPN-------SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~-------~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v 89 (362)
|||+++.++++ ++++++|.|+|+ ++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++|
T Consensus 3 mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 3 NRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred ceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcc
Confidence 89999999987 999999999874 68999999999999999999987643 3569999999999999999999
Q ss_pred CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCCccccccCCceecccccccceeeeEEeecC-
Q 018022 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA- 165 (362)
Q Consensus 90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~---~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~- 165 (362)
++|++||||++.+...|+.|.+|+.+++++|.+.... ..+|+...| . ..|+|+||+.+|..
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~--------------~-~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG--------------G-WVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC--------------C-CCCceEEEEEechhh
Confidence 9999999999999999999999999999999975321 012221000 0 01499999999964
Q ss_pred -ceEEcCCCCCc----cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 018022 166 -HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (362)
Q Consensus 166 -~~~~~P~~l~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (362)
+++++|++++. .+++.+.+.+.++|+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998753 34566677889999976 5678999999999989999999999999999966777788889999
Q ss_pred HHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCH--------------HHHHHHHHHhccCCceEEEEcc
Q 018022 241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--------------SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 241 ~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
+++++|++.+...++ .++.+.+.+++++ ++|++||++|.+ ..++++++.++++ |+++.+|.
T Consensus 225 ~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 225 QARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 999999975433333 4677788888877 899999999986 4699999999998 99999998
Q ss_pred CCCCC-----------ccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022 306 DQPGS-----------QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 306 ~~~~~-----------~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
+.... .+++....++.+++++.|... ...+.++++++++++|++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~g~i~~~ 358 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRNLMQAILHDRVQIA 358 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEeccC---ChhhhHHHHHHHHHcCCCCHH
Confidence 63211 223445556667777776421 112345789999999999864
No 20
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8.3e-45 Score=350.58 Aligned_cols=306 Identities=22% Similarity=0.333 Sum_probs=255.4
Q ss_pred EEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 018022 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (362)
Q Consensus 19 a~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 98 (362)
+++..+..+.+++.+++.|+|+++||+|||.++|||++|++.+.|......+|.++|||++|+|+++|+++++|++||||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 33444444458889999999999999999999999999999998865434578999999999999999999999999999
Q ss_pred EeeCCC-CCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 99 IPHFLA-DCTECVGCRSKKGNLCSAFPFKIS----PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 99 ~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
++.+.. +|+.|.+|+.+++++|++..+... .|...+ |+|+||+.+|+++++++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ-------------------GGYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC-------------------CccccEEEEchHHeEECCCC
Confidence 877765 699999999999999998653200 122223 39999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHhcCCcEEE
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFV 251 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~g~~~vv 251 (362)
+++++++.+.+...|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +.+.++++|+++++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999997644332 3689999999999999999999999999 7888887655 47888899999999
Q ss_pred cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
++.+ . +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|... ...++++..++.+++++.|++.
T Consensus 229 ~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~ 298 (375)
T PLN02178 229 VTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQI 298 (375)
T ss_pred cCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCc
Confidence 8764 2 34555554 6999999999987789999999997 9999999753 3457788888889999999876
Q ss_pred cCCCccccHHHHHHHHHcCCccccee
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~~~~ 357 (362)
+. .++++++++++++|+|++.++
T Consensus 299 ~~---~~~~~~~~~l~~~g~i~~~i~ 321 (375)
T PLN02178 299 GG---MKETQEMLEFCAKHKIVSDIE 321 (375)
T ss_pred cC---HHHHHHHHHHHHhCCCcccEE
Confidence 54 478999999999999998774
No 21
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-44 Score=346.19 Aligned_cols=313 Identities=22% Similarity=0.332 Sum_probs=261.3
Q ss_pred eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++.+++. ++++++|.|+| .++||+|||.++++|++|...+.... ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 79999999886 99999999998 59999999999999999987543221 12358899999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|++.+..+|+.|..|..+.++.|.+..+ .|...+| +|+||+.++.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999976543 3433444 999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
+++++++. .+.++|++ .+...+++|++|||+|+|++|++++|+|+++|++.|++++++++|+++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998875 45667876 46678899999999999999999999999999966899999999999999999999998876
Q ss_pred CCCccHHHHHHhhcCC-Ccc-EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcccc-CHHHHHhcCcEEEEeecc
Q 018022 256 CGDKSVSQIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL-SSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~-g~d-~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~-~~~~~~~~~~~i~g~~~~ 332 (362)
.+ .+.+.+++.+ ++| ++|||+|++..+..++++++++ |+++++|.......++. ++..++.|++++.|++++
T Consensus 215 ---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 289 (347)
T PRK10309 215 ---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMN 289 (347)
T ss_pred ---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEecc
Confidence 44 5567777766 898 9999999988799999999997 99999997543222211 234677889999998765
Q ss_pred CCC--ccccHHHHHHHHHcCCcc--cceeccc
Q 018022 333 GLK--AKSDIPILLKRYMDKWSY--VPFSGTR 360 (362)
Q Consensus 333 ~~~--~~~~l~~~l~~~~~g~l~--~~~~~~~ 360 (362)
... .+++++++++++++|+++ +.++.+|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~ 321 (347)
T PRK10309 290 YSSPWPGQEWETASRLLTERKLSLEPLIAHRG 321 (347)
T ss_pred ccCCcchhHHHHHHHHHHcCCCCchhheEEEe
Confidence 322 247899999999999985 4455554
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.1e-44 Score=347.72 Aligned_cols=309 Identities=24% Similarity=0.309 Sum_probs=248.1
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++..++.+++++++|.|+|+++||||||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 689999865544999999999999999999999999999999999887532 246899999999999999999 9999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
+||||++.+..+|++|..|..+++++|++..+. ..|.. .+ |+|+||+.+++..++++|+
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~-------------------G~~aey~~~~~~~~~~~P~ 139 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH-------------------GFMREYFVDDPEYLVKVPP 139 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC-------------------ccceeEEEeccccEEECCC
Confidence 999999999999999999999999999875431 11221 23 3999999999999999999
Q ss_pred CCCccchhccccchhhhHHHHH------HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC---CchHHHHHH
Q 018022 173 TVPPNRACLLSCGVSTGVGAAW------RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGK 243 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~------~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~---~~~~~~~~~ 243 (362)
+++ ++++ +..++.+++.++. ...++++|++|+|+|+|++|++++|+|+++|+ +|+++++ +++|+++++
T Consensus 140 ~~~-~~a~-~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 140 SLA-DVGV-LLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred CCC-ccee-ecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence 998 4443 3335555444332 22336789999999999999999999999999 8999987 678999999
Q ss_pred hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccC----HHHH
Q 018022 244 RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS----SFEV 319 (362)
Q Consensus 244 ~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~----~~~~ 319 (362)
++|++. +++.+ +++.+ .. . .+++|++|||+|.+..+..+++.++++ |+++++|...+....+++ ...+
T Consensus 217 ~~Ga~~-v~~~~---~~~~~-~~-~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~ 288 (355)
T cd08230 217 ELGATY-VNSSK---TPVAE-VK-L-VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDL 288 (355)
T ss_pred HcCCEE-ecCCc---cchhh-hh-h-cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhH
Confidence 999986 56654 44433 21 1 238999999999987789999999997 999999986543345555 3567
Q ss_pred HhcCcEEEEeeccCCCccccHHHHHHHHHcCC------cccceeccc
Q 018022 320 LHSGKILMGSLFGGLKAKSDIPILLKRYMDKW------SYVPFSGTR 360 (362)
Q Consensus 320 ~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~------l~~~~~~~~ 360 (362)
+.|++++.|++.+. +++++++++++.+++ +++.++.+|
T Consensus 289 ~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~ 332 (355)
T cd08230 289 VLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRV 332 (355)
T ss_pred hhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeee
Confidence 88999999986543 478999999999877 555566665
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.6e-44 Score=345.82 Aligned_cols=305 Identities=24% Similarity=0.394 Sum_probs=263.5
Q ss_pred EEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC-CCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 018022 20 AIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (362)
Q Consensus 20 ~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 98 (362)
+++.+++.+++++++|.|.|+++||+|||.+++||++|+..+.+.. +...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4667777669999999999999999999999999999998874432 334678999999999999999999887 99999
Q ss_pred EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC------
Q 018022 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP------ 172 (362)
Q Consensus 99 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~------ 172 (362)
++.+..+|+.|..|+.+++++|.+... .|...+| +|+||+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccccc
Confidence 999999999999999999999987554 3433345 999999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++++++++.+.+.+.++|+++ ...++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 899999988888999999976 45789999999999999999999999999999 8999999999999999999999998
Q ss_pred CCCCCCccHHHHHHhhcCC-Ccc----EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GAD----YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d----~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 327 (362)
+.+...+++.+.+++++++ ++| ++|||+|+...++.++++++++ |+++++|.... ..++++..++.+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEE
Confidence 7651113577788888877 886 8999999988788999999997 99999998532 34677778888889999
Q ss_pred EeeccCCCccccHHHHHHHHHcCCcccc
Q 018022 328 GSLFGGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 328 g~~~~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
|++.+. .++++++++++++|+|++.
T Consensus 294 g~~~~~---~~~~~~~~~~i~~g~i~~~ 318 (349)
T TIGR03201 294 GNWGCP---PDRYPAALDLVLDGKIQLG 318 (349)
T ss_pred EEecCC---HHHHHHHHHHHHcCCCCcc
Confidence 987543 4789999999999999763
No 24
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.8e-44 Score=341.46 Aligned_cols=299 Identities=21% Similarity=0.239 Sum_probs=256.2
Q ss_pred EEeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 20 AIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 20 ~~~~~~~~----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
+++..++. .++++++|.|+|+++||+|||.++|||++|.+.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 45555552 38999999999999999999999999999999998876544558999999999999999999999999
Q ss_pred CEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 96 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
|+|++.+. ..|+.|..|+.++++.|++..+ .|...+| +|+||+.+|.++++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCCC
Confidence 99987764 4699999999999999988665 3444445 99999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
++++++.+.+.+.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999998999999987 56889999999999999999999999999999 899999999999999999999998754
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
+ .. .+++|+++++.+....+..++++++++ |+++.+|...+ ...++++..++.+++++.|++...
T Consensus 218 ~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~- 282 (329)
T TIGR02822 218 D---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLT-DTPPLNYQRHLFYERQIRSVTSNT- 282 (329)
T ss_pred c---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCc-cCCCCCHHHHhhCCcEEEEeecCC-
Confidence 3 11 126899999998888899999999997 99999997432 223577777888899999986443
Q ss_pred CccccHHHHHHHHHcCCcccceeccc
Q 018022 335 KAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 335 ~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
++++.++++++++|++++ ++++|
T Consensus 283 --~~~~~~~~~l~~~g~i~~-i~~~~ 305 (329)
T TIGR02822 283 --RADAREFLELAAQHGVRV-TTHTY 305 (329)
T ss_pred --HHHHHHHHHHHHhCCCee-EEEEE
Confidence 477899999999999985 45554
No 25
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.5e-43 Score=339.17 Aligned_cols=310 Identities=25% Similarity=0.399 Sum_probs=270.5
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC-----------CCCCCccccccceEEEEEe
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV 85 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~v 85 (362)
|||+++.+++. +++++++.|+|.++||+||+.++++|++|+..+.+... ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 79999998876 99999999999999999999999999999887654311 0136899999999999999
Q ss_pred CCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeec
Q 018022 86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (362)
Q Consensus 86 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~ 164 (362)
|+++++|++||+|+..+..+|+.|.+|+.+..++|.+..+ .|.. .+ |+|++|+.++.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~a~~~~~~~ 137 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG-------------------GGFAEYVVVPA 137 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC-------------------CceeeEEEech
Confidence 9999999999999999999999999999999999976543 2221 13 39999999999
Q ss_pred CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (362)
Q Consensus 165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (362)
+.++++|+++++++++++ ..+.+||+++ ...++++|++|+|+|+|.+|++++|+|+.+|+++|+++++++++.+++++
T Consensus 138 ~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~ 215 (351)
T cd08233 138 YHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE 215 (351)
T ss_pred HHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 999999999999998876 4778999987 78889999999999999999999999999999789999999999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022 245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG 323 (362)
Q Consensus 245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 323 (362)
+|++.++++++ .++.+.+++.+++ ++|++||++|....++.++++++++ |+++.+|... ...++++..++.++
T Consensus 216 ~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~ 289 (351)
T cd08233 216 LGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKE 289 (351)
T ss_pred hCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhC
Confidence 99999999887 7788889888877 7999999999877789999999997 9999999854 34677888888999
Q ss_pred cEEEEeeccCCCccccHHHHHHHHHcCCccc--ceeccc
Q 018022 324 KILMGSLFGGLKAKSDIPILLKRYMDKWSYV--PFSGTR 360 (362)
Q Consensus 324 ~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~--~~~~~~ 360 (362)
+++.|++.+. +++++++++++++|+|++ .++.+|
T Consensus 290 ~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~ 325 (351)
T cd08233 290 KTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRI 325 (351)
T ss_pred cEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEe
Confidence 9999986543 588999999999999964 355554
No 26
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.7e-43 Score=339.75 Aligned_cols=316 Identities=21% Similarity=0.305 Sum_probs=263.1
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
..++|++++.+++.+++++++.|+|+++||+|||.+++||++|+..+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 45999999999988999999999999999999999999999999998886644457899999999999999999999999
Q ss_pred CCEEEeeCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 95 GDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 95 Gd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
||+|++.+.. .|++|..|+.++.++|++..+....+. ..| ....|+|+||+.++.+.++++|++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP~~ 152 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIPEG 152 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECCCC
Confidence 9999876544 699999999999999987643210000 001 011249999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~vv~ 252 (362)
+++++++.+++.+.|||+++......++|++|+|+|+|++|++++|+|+.+|+ +++++++++++++. ++++|++++++
T Consensus 153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~ 231 (357)
T PLN02514 153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV 231 (357)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence 99999999999999999987665666899999999989999999999999999 78888777776655 46799998887
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
+.+ . +.+.+.+. ++|++||++|....++.++++++++ |+++.+|... ...++++..++.+++++.|++.+
T Consensus 232 ~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~ 301 (357)
T PLN02514 232 SSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN--TPLQFVTPMLMLGRKVITGSFIG 301 (357)
T ss_pred CCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCcccHHHHhhCCcEEEEEecC
Confidence 654 2 23444443 6999999999877789999999997 9999999853 23567778888899999999765
Q ss_pred CCCccccHHHHHHHHHcCCcccceeccc
Q 018022 333 GLKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
. .++++++++++++|++++.++ +|
T Consensus 302 ~---~~~~~~~~~~~~~g~l~~~i~-~~ 325 (357)
T PLN02514 302 S---MKETEEMLEFCKEKGLTSMIE-VV 325 (357)
T ss_pred C---HHHHHHHHHHHHhCCCcCcEE-EE
Confidence 4 468999999999999987664 44
No 27
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=9e-43 Score=336.59 Aligned_cols=337 Identities=42% Similarity=0.749 Sum_probs=272.6
Q ss_pred CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022 13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (362)
Q Consensus 13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~ 92 (362)
+-.+|||+++..++++++++++|.|+|.++||+|||.+++||++|...+.|..+ ..+|.++|||++|+|+++|++++.|
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence 445699999999887799999999999999999999999999999999988753 3568999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
++||+|++.+..+|++|.+|+.++.+.|++.......|...++..++. ..|...++.+..|+|+||++++.++++++|+
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccccccCCCcccceEEecccceeeCCC
Confidence 999999999999999999999999999987543211122211111100 0111112222346999999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++++++++++.+++.+||+++....++++|++|+|+|+|++|++++++|+.+|+.+|++++++++|++.++++|++++++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~ 241 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECIN 241 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence 99999999999999999998878889999999999988999999999999999878999999999999999999999998
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHh-ccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
..+ ...++.+.+.+++++++|++|||+|++..+..++..+ +++ |+++.+|.......+++++.. +.++.++.+++.
T Consensus 242 ~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~ 318 (373)
T cd08299 242 PQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPML-LLTGRTWKGAVF 318 (373)
T ss_pred ccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHH-HhcCCeEEEEEe
Confidence 764 1123667777776568999999999877678777765 566 999999975433345555543 346889999988
Q ss_pred cCCCccccHHHHHHHHHcCCccc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~ 354 (362)
+.+..++++.++++.+.++.+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~ 341 (373)
T cd08299 319 GGWKSKDSVPKLVADYMAKKFNL 341 (373)
T ss_pred cCCccHHHHHHHHHHHHcCCCCc
Confidence 77655678888888888776543
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=7e-43 Score=335.86 Aligned_cols=323 Identities=27% Similarity=0.375 Sum_probs=270.5
Q ss_pred eEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC------
Q 018022 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG------ 91 (362)
Q Consensus 18 ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~------ 91 (362)
||+++.++++.+++++++.|.|+++||+|||.++++|++|...+.|..+...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 79999999966999999999999999999999999999999998887653567899999999999999999986
Q ss_pred CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCC-CCccccccCCceecccccccceeeeEEeecC-ceEE
Q 018022 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVK 169 (362)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~-~~~~ 169 (362)
|++||+|+..+..+|+.|..|+.++.+.|++.... |.... |. .-..|+|++|+.++++ .+++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~~~ 145 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCDD-------------PHLSGGYAEHIYLPPGTAIVR 145 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---cccccccC-------------CCCCcccceEEEecCCCceEE
Confidence 99999999999999999999999999999887652 22110 00 0012499999999986 7999
Q ss_pred cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
+|++++.++++++++++.|||+++.+....+++++|||+|+|.+|++++++|+.+|+++|+++++++++.++++++|+++
T Consensus 146 lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~ 225 (361)
T cd08231 146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225 (361)
T ss_pred CCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCe
Confidence 99999999999988899999998866666679999999999999999999999999978999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (362)
Q Consensus 250 vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 328 (362)
++++++....++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|........++++..++.+++++.+
T Consensus 226 vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
T cd08231 226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIG 304 (361)
T ss_pred EEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEE
Confidence 9987651112234577888877 9999999999877789999999997 9999999754334556777778889999999
Q ss_pred eeccCCCccccHHHHHHHHHcC--Cc--ccceeccc
Q 018022 329 SLFGGLKAKSDIPILLKRYMDK--WS--YVPFSGTR 360 (362)
Q Consensus 329 ~~~~~~~~~~~l~~~l~~~~~g--~l--~~~~~~~~ 360 (362)
++.+. +++++++++++.++ .+ .+.+.++|
T Consensus 305 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 337 (361)
T cd08231 305 VHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRY 337 (361)
T ss_pred cccCC---chhHHHHHHHHHhccCcCCchhheeeee
Confidence 87543 47899999999887 33 33445444
No 29
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.1e-43 Score=338.98 Aligned_cols=296 Identities=21% Similarity=0.229 Sum_probs=242.1
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC----CCCCccccccceEEEEEeCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIGVVESVGENVD 90 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~----~~~p~~~G~e~~G~Vv~vG~~v~ 90 (362)
|.-||++++++++ +++++++.|. +++||+|||.++|||++|++++.|.+.. ..+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 4568999999997 9999999995 9999999999999999999999887532 357999999999999998864
Q ss_pred CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (362)
Q Consensus 91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~ 170 (362)
+|++||||++.+..+|+ |..| ...++|.+..+ .|...+| +|+||+.+|+++++++
T Consensus 77 ~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 131 (341)
T cd08237 77 TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKL 131 (341)
T ss_pred ccCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEEC
Confidence 79999999999888877 4355 45677877654 2333345 9999999999999999
Q ss_pred CCCCCccchhccccchhhhHHHHHH--hcCCCCCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhcCC
Q 018022 171 DPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGV 247 (362)
Q Consensus 171 P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~g~ 247 (362)
|+++++++|+++. +++++|+++.. .+.+++|++|||+|+|++|++++|+++. +|..+|++++++++|++++++++.
T Consensus 132 P~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~ 210 (341)
T cd08237 132 PDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADE 210 (341)
T ss_pred CCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCc
Confidence 9999999888665 78889987643 3457899999999999999999999986 665589999999999999988766
Q ss_pred cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCC---HHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG 323 (362)
Q Consensus 248 ~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 323 (362)
+.+++ ++ ... ++|+|||++|+ +..+..+++.++++ |+++++|... .+.++++..++.|+
T Consensus 211 ~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~ 273 (341)
T cd08237 211 TYLID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKG 273 (341)
T ss_pred eeehh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCc
Confidence 54321 11 112 69999999994 56689999999998 9999999743 24577888888999
Q ss_pred cEEEEeeccCCCccccHHHHHHHHHcC-----Ccccceeccc
Q 018022 324 KILMGSLFGGLKAKSDIPILLKRYMDK-----WSYVPFSGTR 360 (362)
Q Consensus 324 ~~i~g~~~~~~~~~~~l~~~l~~~~~g-----~l~~~~~~~~ 360 (362)
+++.|++.+. .+++++++++++++ ++++.++.+|
T Consensus 274 ~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 312 (341)
T cd08237 274 LTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVF 312 (341)
T ss_pred eEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhcccc
Confidence 9999986433 47899999999998 5666666665
No 30
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.6e-42 Score=333.91 Aligned_cols=332 Identities=40% Similarity=0.743 Sum_probs=282.1
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
+||+++.+++.++++++++.|.++++||+||+.++++|++|+..+.+... ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 47899998887799999999999999999999999999999998887654 35678999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|+..+..+|++|.+|+.++.++|+........|...+|.+.++- -|-..++.++.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999999999999999999999999887764334444444333211 0111223334569999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
++++++.+++.+||+++.+.+++++|++|||+|+|++|++++++|+.+|+..|++++++++|.+.++++|++++++.++
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~- 237 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD- 237 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc-
Confidence 9999999899999998888889999999999988999999999999999967889998999999999999999998776
Q ss_pred CCc--cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhc-cCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022 257 GDK--SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 257 ~~~--~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~-~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
. ++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|.........++...+ .++.++.|++.+.
T Consensus 238 --~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~ 313 (365)
T cd05279 238 --QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG 313 (365)
T ss_pred --ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence 4 67788888775599999999998777899999999 97 9999999753334567777777 6788999988777
Q ss_pred CCccccHHHHHHHHHcCCcccc
Q 018022 334 LKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
+...+++.+++++++++.+++.
T Consensus 314 ~~~~~~~~~~~~l~~~~~l~~~ 335 (365)
T cd05279 314 WKSKDSVPKLVALYRQKKFPLD 335 (365)
T ss_pred CchHhHHHHHHHHHHcCCcchh
Confidence 6667899999999999998863
No 31
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=8.3e-44 Score=309.34 Aligned_cols=294 Identities=23% Similarity=0.274 Sum_probs=261.7
Q ss_pred CCcceeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022 12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (362)
Q Consensus 12 ~~~~~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v 89 (362)
..|+..|-+++++.|.. +++++.|.|+|+++|++||..|+|+|+-|..++.|.+.+.+.|++||-|++|+|+++|++|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 35677899999998866 9999999999999999999999999999999999999888999999999999999999999
Q ss_pred CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (362)
Q Consensus 90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~ 169 (362)
+++++||||+... ..|.|+|++.+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence 9999999998542 124999999999999999
Q ss_pred cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (362)
Q Consensus 170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~ 248 (362)
+|+.+++.+||++.+...|||..+++.-++++|++|||+.| |++|+++.|++++.|. .+|++.+.++|++.+++.|++
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999976 9999999999999999 999999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022 249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (362)
Q Consensus 249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 327 (362)
++|+++. +|+.+.+.+++++ |+|+++|.+|.+. +...+.+|++. |.++.+|+.. ...-+++...+--|.+++.
T Consensus 194 h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lv 267 (336)
T KOG1197|consen 194 HPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLV 267 (336)
T ss_pred ceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhc
Confidence 9999998 9999999999988 9999999999877 99999999998 9999999853 3444666666666777765
Q ss_pred EeeccCCC-cc----ccHHHHHHHHHcCCcccceecccC
Q 018022 328 GSLFGGLK-AK----SDIPILLKRYMDKWSYVPFSGTRA 361 (362)
Q Consensus 328 g~~~~~~~-~~----~~l~~~l~~~~~g~l~~~~~~~~~ 361 (362)
-.++..+. +. ....++++++-+|.|++.|+++|.
T Consensus 268 rpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~yp 306 (336)
T KOG1197|consen 268 RPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYP 306 (336)
T ss_pred cHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecc
Confidence 44433332 22 345788899999999999999873
No 32
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.6e-42 Score=333.97 Aligned_cols=334 Identities=33% Similarity=0.577 Sum_probs=276.4
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
|+|||+++.++++++++++.+.|.+.++||+|||.++++|++|...+.+..+ ..+|.++|+|++|+|+++|+++.+|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 5799999999877799999999999999999999999999999999888654 346889999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC-ceecccccccceeeeEEeecCceEEcCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG-ETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~-~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
||+|++.+. .|+.|..|+.+..++|.+.......|...+|..-..+..| +...+.+..|+|++|+.++.++++++|++
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 999999775 8999999999999999865432222222222000000000 00011223469999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+++++++.+++++.+||.++.....++++++|+|+|+|.+|++++++|+.+|++.+++++++++|.++++++|+++++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999988888899999999999889999999999999999779999999999999999999999998
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
++ .++.+.+.++++.++|+++||+|....+..++++++++ |+++.+|.........+++..++.+++++.++....
T Consensus 239 ~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 239 KE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 76 67888888887339999999999877789999999997 999999975333445677777778899999887654
Q ss_pred CCccccHHHHHHHHHcCCccc
Q 018022 334 LKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~ 354 (362)
....+.++++++++++++|++
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~ 335 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPF 335 (365)
T ss_pred cChHHHHHHHHHHHHcCCCCh
Confidence 433567899999999999865
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.5e-42 Score=329.73 Aligned_cols=311 Identities=26% Similarity=0.303 Sum_probs=265.4
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++. +++++++.|.+.++||+|||.++++|++|+..+.+.......|.++|||++|+|+++|+++++|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999987 99999999999999999999999999999998887665556689999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCCC
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~l 174 (362)
+|+..+..+|+.|..|..++++.|.+....+..+...+ |+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD-------------------GVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------------cceeEEEEcchhhCceEECCCCC
Confidence 99999888999999999999999986532212222223 399999999974 899999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
+.+++++++..+.+||++ .+..+++++++|||+|+|++|++++|+|+.+|++.+++++++++|.++++++|++++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 999999998899999998 4778899999999998899999999999999997799999999999999999999999987
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH--HHHHhcCcEEEEeec
Q 018022 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS--FEVLHSGKILMGSLF 331 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~--~~~~~~~~~i~g~~~ 331 (362)
+ .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|........+++. .....+...+.+++.
T Consensus 220 ~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 295 (351)
T cd08285 220 N---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC 295 (351)
T ss_pred C---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeec
Confidence 6 6788888887766 8999999999887789999999997 9999999764333334442 222345667776543
Q ss_pred cCCCccccHHHHHHHHHcCCccc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~ 354 (362)
.. .+++++++++++++|+|++
T Consensus 296 ~~--~~~~~~~~~~~~~~g~i~~ 316 (351)
T cd08285 296 PG--GRLRMERLASLIEYGRVDP 316 (351)
T ss_pred CC--ccccHHHHHHHHHcCCCCh
Confidence 22 2578999999999999998
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=4.5e-41 Score=319.91 Aligned_cols=305 Identities=23% Similarity=0.348 Sum_probs=267.2
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++.+++++++|.|++.++||+||+.++++|++|...+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999965699999999999999999999999999999999888664446688999999999999999999999999
Q ss_pred EEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 97 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
+|++.+ ...|+.|.+|..++++.|.+..+ .|...+| +|++|+.++...++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCC
Confidence 998755 56799999999999999987664 3443344 999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
+++++.+++.+.+||+++. ...+.++++|||+|+|.+|++++++|+.+|+ +++++++++++++.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 9999999999999999874 4589999999999999999999999999999 8999999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (362)
.++.+.+.++ +++|++||++|....+..++++++++ |+++.+|... ...++++..++.+++++.++..+.
T Consensus 217 ---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~-- 286 (333)
T cd08296 217 ---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT-- 286 (333)
T ss_pred ---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC--
Confidence 5677777665 36999999998777789999999997 9999999854 346777777889999999986433
Q ss_pred ccccHHHHHHHHHcCCcccce
Q 018022 336 AKSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 336 ~~~~l~~~l~~~~~g~l~~~~ 356 (362)
.++++.++++++++++++.+
T Consensus 287 -~~~~~~~~~~~~~~~l~~~v 306 (333)
T cd08296 287 -ALDSEDTLKFSALHGVRPMV 306 (333)
T ss_pred -HHHHHHHHHHHHhCCCCceE
Confidence 47899999999999888654
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.7e-41 Score=320.88 Aligned_cols=307 Identities=20% Similarity=0.377 Sum_probs=261.5
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++. +++++++.|+|.++||+||+.+++||++|+..+.|..+..++|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 78999999886 99999999999999999999999999999999888765556799999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|++.+..+|+.|..|..+++++|.+..+ .+...+| +|++|+.++..+++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG-------------------GFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEccCC-------------------cceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999976543 2222234 9999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
++++++ ..+.++|. +.+..++++|++|+|+|+|.+|++++|+|+. +|++.+++++++++|.++++++|+++++++++
T Consensus 138 ~~a~~~-~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAVMV-EPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHhhh-chHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 887644 57788885 5677899999999999999999999999996 69977999999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
.++.+.+.. .+ ++|++||++|.+..+..++++++++ |+++.+|.... ...++...+..+++++.++..
T Consensus 216 ---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~--- 284 (339)
T PRK10083 216 ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL--- 284 (339)
T ss_pred ---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec---
Confidence 566666643 23 5789999999877799999999997 99999997532 344555566678888888753
Q ss_pred CccccHHHHHHHHHcCCcccc--eeccc
Q 018022 335 KAKSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 335 ~~~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
..+++++++++++++++++. ++.+|
T Consensus 285 -~~~~~~~~~~~~~~g~l~~~~~~~~~~ 311 (339)
T PRK10083 285 -NANKFPVVIDWLSKGLIDPEKLITHTF 311 (339)
T ss_pred -ChhhHHHHHHHHHcCCCChHHheeeee
Confidence 24789999999999999873 44443
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.4e-41 Score=328.07 Aligned_cols=306 Identities=19% Similarity=0.226 Sum_probs=247.4
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-hcCCCC------CCCCccccccceEEEEEeCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP------AVFPRILGHEAIGVVESVGE 87 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~-~g~~~~------~~~p~~~G~e~~G~Vv~vG~ 87 (362)
|+|||+++++++. ++++++|.|+|+++||+|||.++|||++|++.+ .|.... ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5799999999987 999999999999999999999999999999976 443211 24789999999999999999
Q ss_pred CCC-CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC-
Q 018022 88 NVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA- 165 (362)
Q Consensus 88 ~v~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~- 165 (362)
+++ +|++||||++.+...|+.|..|.. .|...+| +|+||++++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G-------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG-------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC-------------------cceEEEEecHHh
Confidence 998 699999999999989998877621 1222344 99999999987
Q ss_pred ---ceEEcCCCCCccchhcccc-ch-hhhHHHH--------HHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcC--CCEE
Q 018022 166 ---HVVKVDPTVPPNRACLLSC-GV-STGVGAA--------WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG--ATRI 229 (362)
Q Consensus 166 ---~~~~~P~~l~~~~aa~~~~-~~-~ta~~~l--------~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g--~~~v 229 (362)
+++++|+++++++++++.. .. .+++.++ .+..++++|++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 6899999999999886531 11 1233322 24578899999999985 999999999999975 4589
Q ss_pred EEEcCCchHHHHHHhc--------CCc-EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCce
Q 018022 230 IGVDVISEKFEIGKRF--------GVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK 299 (362)
Q Consensus 230 i~~~~~~~~~~~~~~~--------g~~-~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~ 299 (362)
++++++++|++.++++ |++ .++++++ ..++.+.+++++++ ++|++||++|.+..++.++++++++ |+
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~ 283 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GC 283 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-Ce
Confidence 9999999999999997 666 5677653 24678888888887 9999999999888899999999997 98
Q ss_pred EEEEccCC-CCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022 300 TIVLGVDQ-PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 300 iv~~G~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
++.++... .....++++..++.+++++.|++.+. +++++++++++++|+|++. ++.+|
T Consensus 284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~ 344 (410)
T cd08238 284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIG 344 (410)
T ss_pred EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEe
Confidence 88775422 22235678888899999999986543 4789999999999999983 55444
No 37
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.2e-40 Score=317.69 Aligned_cols=331 Identities=43% Similarity=0.692 Sum_probs=276.6
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++.++++++++.|++.++||+||+.++++|+.|...+.|..+ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 79999999987799999999999999999999999999999998888654 35678999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|+..+..+|+.|.+|..++.+.|+....+ .+|...++.++|. .-|....-.+..|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFT-ADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCccccc-ccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999865321 0111111111110 00111111133469999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
++++++++.+.+||.++.+..++.++++|||+|+|.+|++++++|+.+|+++|+++++++++.+.++++|++++++++.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999998888889999999999988999999999999999955999999999999999999999998876
Q ss_pred CCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (362)
.++.+.+.+++.+ ++|++||+++....+..++++++++ |+++.+|.........++...+..++..+.++.++...
T Consensus 237 --~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (363)
T cd08279 237 --DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN 313 (363)
T ss_pred --ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcC
Confidence 6788888888765 8999999999777789999999997 99999987543345567777777788888888765544
Q ss_pred ccccHHHHHHHHHcCCccc
Q 018022 336 AKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 336 ~~~~l~~~l~~~~~g~l~~ 354 (362)
..+.+++++++++++++++
T Consensus 314 ~~~~~~~~~~l~~~g~l~~ 332 (363)
T cd08279 314 PRRDIPRLLDLYRAGRLKL 332 (363)
T ss_pred cHHHHHHHHHHHHcCCCCc
Confidence 5688999999999999986
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.5e-40 Score=316.77 Aligned_cols=307 Identities=29% Similarity=0.442 Sum_probs=270.0
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++.++++++++.+.+.|++.++||+||+.++++|++|...+.|..+ ...+|.++|+|++|+|+++|+++.+|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 78999999877799999999999999999999999999999998887654 245689999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..+...|+.|..|..+..++|++..+ .|+..+| +|++|+.++.++++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence 99999999999999999999999999998887 4544455 9999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHh-cCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEFV 251 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~g~~~vv 251 (362)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999987665 46889999999999779999999999999 6 899999999999999999999999
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (362)
++++ . +.+.+++++++ ++|+++|++|+...++.++++++++ |+++.+|.... .+++...++.+++++.++.
T Consensus 218 ~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~ 289 (340)
T cd05284 218 NASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSL 289 (340)
T ss_pred cCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEe
Confidence 9876 5 78888888776 8999999999877789999999997 99999997532 3455555567899999876
Q ss_pred ccCCCccccHHHHHHHHHcCCccccee
Q 018022 331 FGGLKAKSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 331 ~~~~~~~~~l~~~l~~~~~g~l~~~~~ 357 (362)
.. ..+.+++++++++++.+++.+.
T Consensus 290 ~~---~~~~~~~~~~~l~~g~l~~~~~ 313 (340)
T cd05284 290 WG---TRAELVEVVALAESGKVKVEIT 313 (340)
T ss_pred cc---cHHHHHHHHHHHHhCCCCcceE
Confidence 43 3578999999999999987543
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.6e-39 Score=315.35 Aligned_cols=323 Identities=26% Similarity=0.359 Sum_probs=266.7
Q ss_pred eeEEEeccCCCceEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++.++++ +++++++.|.|. +++|+||+.+++||++|+..+.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 79999998876 999999999984 9999999999999999999998987666678999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCC-C---CCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEE
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-S---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVK 169 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~ 169 (362)
|+|++.+..+|+.|.+|+.+..++|++..... . +|....| ..|-........|+|++|++++.+ .+++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG------IFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccc------ccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 99999999999999999999999998754310 0 0000000 000000000123599999999987 8999
Q ss_pred cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
+|++++++++++++..+.+||+++ ....++++++|||+|+|.+|++++++|+.+|..+++++++++++.+++++++...
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 232 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence 999999999999998999999987 7889999999999988999999999999999867999999999999999984446
Q ss_pred EEcCCCCCCc-cHHHHHHhhcCC-CccEEEEcCCCH---------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 250 FVNSKNCGDK-SVSQIIIDMTDG-GADYCFECVGLA---------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 250 vv~~~~~~~~-~~~~~i~~~~~~-g~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
++++.. . ++.+.+.+++++ ++|++||++|+. ..+..++++++++ |+++.+|..
T Consensus 233 vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~ 308 (386)
T cd08283 233 TINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVY 308 (386)
T ss_pred EEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCC
Confidence 777765 4 488888888877 899999999853 3578899999997 999999975
Q ss_pred CCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
... ...+++..++.+++++.++... ..+.+++++++++++++++.
T Consensus 309 ~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~ 353 (386)
T cd08283 309 GGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPS 353 (386)
T ss_pred CCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChh
Confidence 432 3456666677889999987532 35789999999999999864
No 40
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.7e-39 Score=311.08 Aligned_cols=304 Identities=25% Similarity=0.395 Sum_probs=260.3
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---------CCCCccccccceEEEEEeCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---------AVFPRILGHEAIGVVESVGE 87 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---------~~~p~~~G~e~~G~Vv~vG~ 87 (362)
|||++++++++ +++++++.|++.+++|+||+.+++||++|...+.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 79999999987 999999999999999999999999999999988775311 24688999999999999999
Q ss_pred CCC--CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC--CCCCccccccCCceecccccccceeeeEEee
Q 018022 88 NVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP--RDQTSRFKDLRGETIHHFVSVSSFSEYTVLD 163 (362)
Q Consensus 88 ~v~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~--~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~ 163 (362)
+++ +|++||+|+..+..+|++|..|+.++.++|..... .|.. .+ |+|++|+.++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~-------------------g~~~~~~~~~ 137 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNNVN-------------------GGMAEYMRFP 137 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccCCC-------------------CcceeeEEcc
Confidence 998 89999999999999999999999999999975332 2321 23 3999999999
Q ss_pred cC-ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022 164 IA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (362)
Q Consensus 164 ~~-~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (362)
++ .++++|+++++++++++ .++.++|+++ +..+++++++|+|.|+|.+|++++++|+.+|+..++++++++++.+++
T Consensus 138 ~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~ 215 (350)
T cd08256 138 KEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA 215 (350)
T ss_pred cccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH
Confidence 88 57899999999999988 7889999986 788999999999977899999999999999987889999999999999
Q ss_pred HhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHH-H
Q 018022 243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV-L 320 (362)
Q Consensus 243 ~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~-~ 320 (362)
+++|++++++++. .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.... ...++...+ .
T Consensus 216 ~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~ 289 (350)
T cd08256 216 RKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGD--PVTVDWSIIGD 289 (350)
T ss_pred HHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCC--CCccChhHhhc
Confidence 9999999998876 6788888888877 8999999999766688999999997 99999987543 233444433 3
Q ss_pred hcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022 321 HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
.+++++.++.... ..++++++++++|.+++.
T Consensus 290 ~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~ 320 (350)
T cd08256 290 RKELDVLGSHLGP----YCYPIAIDLIASGRLPTD 320 (350)
T ss_pred ccccEEEEeccCc----hhHHHHHHHHHcCCCChh
Confidence 5688888876443 568999999999999873
No 41
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.7e-39 Score=308.93 Aligned_cols=310 Identities=29% Similarity=0.413 Sum_probs=269.7
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++.++++++.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999999887799999999999999999999999999999999988766556789999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCCC
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~l 174 (362)
+|+..+..+|++|..|..+..++|..+.+ .+...+| +|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG-------------------SFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------------cceeEEEcccccCceEECCCCC
Confidence 99988888999999999999999998653 3333344 99999999974 899999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
+.++++.+.+.+.+||+++.+..++.++++|+|+|+|.+|++++++|+..|+ .|+++++++++.+.++++|++++++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999988999999988778889999999999999999999999999999 899999999999999999999999876
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc-cccCHHHHHhcCcEEEEeeccC
Q 018022 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~-~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
+ +.++.+.+..+..+++|++||++|+...+...+++++++ |+++.+|....... ..+++..++.+++++.++...
T Consensus 218 ~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (345)
T cd08260 218 E--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM- 293 (345)
T ss_pred c--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC-
Confidence 3 245677777766558999999999776688999999997 99999997533222 456666777889999997643
Q ss_pred CCccccHHHHHHHHHcCCcccc
Q 018022 334 LKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
..+.+++++++++++++.+.
T Consensus 294 --~~~~~~~~~~l~~~~~i~~~ 313 (345)
T cd08260 294 --PAHRYDAMLALIASGKLDPE 313 (345)
T ss_pred --CHHHHHHHHHHHHcCCCChh
Confidence 35789999999999998764
No 42
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.3e-39 Score=311.71 Aligned_cols=313 Identities=26% Similarity=0.357 Sum_probs=268.4
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC------------CCCCCccccccceEEEEE
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF------------PAVFPRILGHEAIGVVES 84 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~------------~~~~p~~~G~e~~G~Vv~ 84 (362)
|||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.+..+ ...+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 79999998888799999999999999999999999999999998877543 224578899999999999
Q ss_pred eCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022 85 VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (362)
Q Consensus 85 vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~ 164 (362)
+|++++++++||+|+..+...|+.|..|.++++++|....+ .|.... |+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD-------------------GGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------------CcceeeEEecH
Confidence 99999999999999999999999999999999999977544 222223 49999999999
Q ss_pred CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (362)
Q Consensus 165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (362)
+.++++|+++++.+++.+.+.+.+||+++.....++++++|+|+|+|.+|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999988776667789999999889999999999999999889999999999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCc
Q 018022 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK 324 (362)
Q Consensus 245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 324 (362)
+|++.+++.++ .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|...... .++...+..+++
T Consensus 219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~~~~~ 292 (350)
T cd08240 219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEA--TLPLPLLPLRAL 292 (350)
T ss_pred hCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCC--cccHHHHhhcCc
Confidence 99998888776 66777777766558999999999877799999999997 9999998754322 344444566899
Q ss_pred EEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022 325 ILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 325 ~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
++.+++... .+++.+++++++++.+++.+..+|
T Consensus 293 ~i~~~~~~~---~~~~~~~~~ll~~~~i~~~~~~~~ 325 (350)
T cd08240 293 TIQGSYVGS---LEELRELVALAKAGKLKPIPLTER 325 (350)
T ss_pred EEEEcccCC---HHHHHHHHHHHHcCCCccceeeEE
Confidence 999886543 378999999999999887554443
No 43
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.7e-39 Score=310.26 Aligned_cols=310 Identities=30% Similarity=0.422 Sum_probs=264.9
Q ss_pred eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++.+++. +.+.++|.|.| .++||+|||.++++|++|...+.|..+..++|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999999887 99999999999 89999999999999999999988877656778999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~ 173 (362)
|+|+..+..+|+.|.+|..+...+|++...+...+...+ |+|++|++++.+ +++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID-------------------GGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCC-------------------CeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999987664322221222 499999999987 89999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
++.++++.+++.+.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|..+++++++++++.++++++|+++++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999986 77889999999998889999999999999996588999888999999999999999998
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
++ .++.+.+++.+++ ++|++||++|+...+..++++++++ |+++.+|.......... ....+.+++++.++...
T Consensus 220 ~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 294 (347)
T cd05278 220 KN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPL-LGEWFGKNLTFKTGLVP 294 (347)
T ss_pred Cc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCc-cchhhhceeEEEeeccC
Confidence 77 6788888887776 8999999999866689999999997 99999986533221111 12334678888876533
Q ss_pred CCCccccHHHHHHHHHcCCcccc
Q 018022 333 GLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
. .+.+++++++++++.|++.
T Consensus 295 ~---~~~~~~~~~~~~~~~l~~~ 314 (347)
T cd05278 295 V---RARMPELLDLIEEGKIDPS 314 (347)
T ss_pred c---hhHHHHHHHHHHcCCCChh
Confidence 2 5789999999999999863
No 44
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=4.2e-40 Score=310.02 Aligned_cols=278 Identities=18% Similarity=0.242 Sum_probs=224.2
Q ss_pred eeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecc-hhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCC
Q 018022 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLC-HSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG 91 (362)
Q Consensus 16 ~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~-~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~ 91 (362)
+|||+++.+++. +++++++.|+|+++||+|||.+++|| ++|+..+.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 489999998887 99999999999999999999999996 7999988887643 3579999999999999999998 6
Q ss_pred CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (362)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P 171 (362)
|++||||++. |..|..|..+ .+ |+|+||+.+|.+.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~~-----------------~~-------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVRG-----------------LF-------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Cccccccccc-----------------cC-------------------CcccceEEcCHHHceeCC
Confidence 9999999873 2233322110 12 399999999999999999
Q ss_pred CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (362)
Q Consensus 172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv 251 (362)
++++++. +++. ...+||+++.. . ..++++++|+|+|++|++++|+|+++|++.|++++.+++|++.+..+ +++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9998764 5555 57899998644 3 34688999999999999999999999996788888888888777654 455
Q ss_pred cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
|+.+ . .+.++|++|||+|+...++.+++.++++ |+++++|.+.. ..++++..++.|++++.++..
T Consensus 192 ~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~ 256 (308)
T TIGR01202 192 DPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAE 256 (308)
T ss_pred Chhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEecc
Confidence 5432 1 1227999999999988789999999997 99999998542 356677778888999998754
Q ss_pred cCCCccccHHHHHHHHHcCCcccc--eeccc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYVP--FSGTR 360 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~~--~~~~~ 360 (362)
+. +++++++++++++|++++. ++.+|
T Consensus 257 ~~---~~~~~~~~~l~~~g~i~~~~~it~~~ 284 (308)
T TIGR01202 257 WQ---PGDLHAVRELIESGALSLDGLITHQR 284 (308)
T ss_pred cc---hhHHHHHHHHHHcCCCChhhccceee
Confidence 32 4789999999999999874 55554
No 45
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=3.4e-39 Score=308.26 Aligned_cols=306 Identities=26% Similarity=0.379 Sum_probs=266.6
Q ss_pred eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++.+++. +++++++.|+| .++||+|||+++++|++|+..+.|..+...+|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 78999999887 99999999996 89999999999999999999998877655568899999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~ 173 (362)
|+|++.+...|++|.+|..+..+.|....+ ..|...+| +|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g-------------------~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGW--ILGNLIDG-------------------TQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCccc--ccccccCC-------------------eeeeEEEcccccCceEECCCC
Confidence 999999999999999999999999986543 12322333 99999999987 89999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
++..+++.+.+.+.+||+.+....++.++++|||.|+|.+|.+++|+|+.+|..++++++++++|.++++++|+++++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999998999999977778889999999999889999999999999994489999999999999999999999998
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
++ .++.+.+.+++.+ ++|++|||+|....++.+++.++++ |+++.+|... ...++++..++.+++++.+....
T Consensus 219 ~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08286 219 AK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG--KPVDLHLEKLWIKNITITTGLVD 292 (345)
T ss_pred cc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC--CCCCcCHHHHhhcCcEEEeecCc
Confidence 76 6677888887776 8999999999877789999999997 9999999743 23567777777889999876432
Q ss_pred CCCccccHHHHHHHHHcCCccc
Q 018022 333 GLKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g~l~~ 354 (362)
.+.+++++++++++.+++
T Consensus 293 ----~~~~~~~~~~~~~~~l~~ 310 (345)
T cd08286 293 ----TNTTPMLLKLVSSGKLDP 310 (345)
T ss_pred ----hhhHHHHHHHHHcCCCCh
Confidence 256889999999999875
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.6e-39 Score=316.07 Aligned_cols=319 Identities=19% Similarity=0.184 Sum_probs=265.1
Q ss_pred CcceeeEEEecc--CC---CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC----------CCCCcccccc
Q 018022 13 KPIQCRAAIATA--PG---EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----------AVFPRILGHE 77 (362)
Q Consensus 13 ~~~~~ka~~~~~--~~---~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~----------~~~p~~~G~e 77 (362)
.|.+|||+++.. .+ +.+++++++.|.++++||+|||.+++||++|+..+.+.... ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 678899999863 22 23889999999999999999999999999999887665210 1123589999
Q ss_pred ceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccce
Q 018022 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSF 156 (362)
Q Consensus 78 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~ 156 (362)
++|+|+++|++++.|++||+|++.+...|+.|..|..+..++|....+ .|.. .+ |+|
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~-------------------g~~ 146 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNY-------------------GSF 146 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCC-------------------Ccc
Confidence 999999999999999999999999999999999999999999986554 2322 22 499
Q ss_pred eeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHh--cCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (362)
Q Consensus 157 a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~ 233 (362)
++|++++..+++++|+++++++++.+.+.+.+||+++... ++++++++|+|+|+ |++|++++++|+.+|+ ++++++
T Consensus 147 a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~ 225 (393)
T cd08246 147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVV 225 (393)
T ss_pred eeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEe
Confidence 9999999999999999999999999999999999987654 68899999999997 9999999999999999 778888
Q ss_pred CCchHHHHHHhcCCcEEEcCCCCC-------------------CccHHHHHHhhcCC--CccEEEEcCCCHHHHHHHHHH
Q 018022 234 VISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG--GADYCFECVGLASLVQEAYAC 292 (362)
Q Consensus 234 ~~~~~~~~~~~~g~~~vv~~~~~~-------------------~~~~~~~i~~~~~~--g~d~vid~~g~~~~~~~~~~~ 292 (362)
+++++++.++++|+++++++++.. ...+.+.+.+++++ ++|++||++|+. .+..++++
T Consensus 226 ~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~ 304 (393)
T cd08246 226 SSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFV 304 (393)
T ss_pred CCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHH
Confidence 899999999999999999875410 01356777787766 799999999974 48899999
Q ss_pred hccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022 293 CRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 293 l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
++++ |+++.+|.... ....++...++.++.++.|++.+. .+++.+++++++++.|.+.+..+|
T Consensus 305 l~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~ 367 (393)
T cd08246 305 CDRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDPCLSKVF 367 (393)
T ss_pred hccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCceeeeeEEE
Confidence 9997 99999987432 234566777778899999986553 368999999999999987655544
No 47
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=8.3e-40 Score=289.22 Aligned_cols=291 Identities=22% Similarity=0.282 Sum_probs=250.1
Q ss_pred CCCcceeeEEEeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeC
Q 018022 11 AGKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVG 86 (362)
Q Consensus 11 ~~~~~~~ka~~~~~~~~~---l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG 86 (362)
..++...|++++.+.|+| ++++++++|+....+|+||.+|+.|||+|+..++|.++- +++|.+-|+|++|+|+.+|
T Consensus 14 ~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vG 93 (354)
T KOG0025|consen 14 SQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVG 93 (354)
T ss_pred cccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEec
Confidence 357778999999999988 889999999988888999999999999999999999987 6789999999999999999
Q ss_pred CCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc
Q 018022 87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH 166 (362)
Q Consensus 87 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~ 166 (362)
+++.+|++||+|+.... +.|+|++|.+.+++.
T Consensus 94 s~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~ 125 (354)
T KOG0025|consen 94 SNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESD 125 (354)
T ss_pred CCcCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccc
Confidence 99999999999985432 235999999999999
Q ss_pred eEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----
Q 018022 167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI---- 241 (362)
Q Consensus 167 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~---- 241 (362)
++++++.+++++||.+.++-+|||..+.+-.++++||+|+-.|+ +.+|++.+|+|++.|+ +.|-+.|+....+.
T Consensus 126 Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~ 204 (354)
T KOG0025|consen 126 LIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQ 204 (354)
T ss_pred eEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHH
Confidence 99999999999999999999999999989999999999999998 9999999999999999 66677667665544
Q ss_pred HHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHH
Q 018022 242 GKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL 320 (362)
Q Consensus 242 ~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 320 (362)
++.+|+++|+...+ ..-.+..+..... .+...|+|+|+.+ ...+.+.|..+ |+++.+|+. +.++++++...++
T Consensus 205 Lk~lGA~~ViTeee---l~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lI 278 (354)
T KOG0025|consen 205 LKSLGATEVITEEE---LRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLI 278 (354)
T ss_pred HHHcCCceEecHHH---hcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchhe
Confidence 45689999996544 1111111121222 7999999999988 77889999998 999999984 6788999999999
Q ss_pred hcCcEEEEeeccCCCcc--------ccHHHHHHHHHcCCcccce
Q 018022 321 HSGKILMGSLFGGLKAK--------SDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 321 ~~~~~i~g~~~~~~~~~--------~~l~~~l~~~~~g~l~~~~ 356 (362)
+|++.+.|+|+..|... +.+.++.++++.|+|..+-
T Consensus 279 FKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~ 322 (354)
T KOG0025|consen 279 FKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN 322 (354)
T ss_pred eccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc
Confidence 99999999999998742 4578899999999998764
No 48
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.4e-39 Score=302.35 Aligned_cols=254 Identities=21% Similarity=0.336 Sum_probs=215.1
Q ss_pred cccccceEEEEEeCCCCC------CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCce
Q 018022 73 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 146 (362)
Q Consensus 73 ~~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 146 (362)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.++++.|++... .|....+. +
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~-------~-- 68 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS-------G-- 68 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC-------C--
Confidence 579999999999999999 89999999999999999999999999999988654 23221000 0
Q ss_pred ecccccccceeeeEEeecC-ceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC
Q 018022 147 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 225 (362)
Q Consensus 147 ~~~~~~~g~~a~y~~v~~~-~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g 225 (362)
....|+|+||+.+|++ +++++|+++++++++.+.+.+.|+|+++ +.....++++|||+|+|++|++++|+|+++|
T Consensus 69 ---~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 69 ---WPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred ---ccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 0012499999999997 7999999999999999998999999976 4556679999999999999999999999999
Q ss_pred CCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022 226 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 226 ~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G 304 (362)
+++|++++++++|+++++++|+++++++++ ..+.+++++++ ++|++||++|.+..++.+++.++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 966999999999999999999999988654 34566677766 8999999999988899999999998 9999999
Q ss_pred cCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCC
Q 018022 305 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKW 351 (362)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~ 351 (362)
...+....++++..++.|++++.|++.+. .++++++++++++++
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~ 262 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANG 262 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhC
Confidence 75433456788889999999999986443 478999999999854
No 49
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.4e-38 Score=299.34 Aligned_cols=301 Identities=27% Similarity=0.445 Sum_probs=259.1
Q ss_pred eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++.+.+ ..+++++++.|.+.++||+|||.++++|++|...+.+.......|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5899998755 249999999999999999999999999999998888775444557899999999999999999999999
Q ss_pred CEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 96 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
|+|+..+. .+|+.|.+|..+..+.|..... +|...+| +|++|++++.++++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQADG-------------------GFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCCC-------------------ceEEEEEcchHHeEECcCCC
Confidence 99998875 6799999999999999986432 3333334 99999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEE--cCCchHHHHHHhcCCcEEEc
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV--DVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~g~~~vv~ 252 (362)
++++++ +...+.++|+++....+++++++|||.|+|.+|.+++++|+.+|+ +|+++ ++++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 555888999998888899999999998889999999999999999 77776 345568888999999888 7
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
++. .++.+.+..++++ ++|.+||++|....+...+++++++ |+++.+|... .....+++..+++|++++.|+++
T Consensus 216 ~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~ 290 (306)
T cd08258 216 GGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRS 290 (306)
T ss_pred CCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEec
Confidence 766 7788888887766 8999999998777789999999997 9999999854 33467788888899999999987
Q ss_pred cCCCccccHHHHHHHHHcC
Q 018022 332 GGLKAKSDIPILLKRYMDK 350 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g 350 (362)
+. +++++++++++++|
T Consensus 291 ~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 291 ST---PASWETALRLLASG 306 (306)
T ss_pred Cc---hHhHHHHHHHHhcC
Confidence 65 47899999999876
No 50
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.7e-38 Score=304.70 Aligned_cols=331 Identities=29% Similarity=0.452 Sum_probs=271.8
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC---CC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG---VV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~---~~ 93 (362)
|||+++.+++.++++++.|.|.+.++||+||+.++++|++|+..+.+..+. .+|.++|||++|+|+++|+++++ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 789999999777999999999999999999999999999999988876643 66889999999999999999988 99
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
+||+|+..+..+|++|..|.-+..++|+...++..++ ...+|-+......+..+.. ...|+|++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccc-ccCCcceeEEEechhhEEECCC
Confidence 9999999999999999999999999998765321111 1111111100000000000 1235999999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++++.+++.+++.+.+||+++.....+.++++|||+|+|.+|++++++|+.+|++.+++++.++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999998877788899999999988999999999999999955999999999999999999999999
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
+++ .++.+.+++..++ ++|++||++++...++.++++++++ |+++.+|.........+++..++.+++++.+++.
T Consensus 239 ~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (367)
T cd08263 239 AAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG 314 (367)
T ss_pred CCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC
Confidence 877 6788888887766 8999999999974588999999997 9999998754333445676777678999888542
Q ss_pred cCCCccccHHHHHHHHHcCCcccc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
.. ..+.+++++++++++++++.
T Consensus 315 ~~--~~~~~~~~~~ll~~~~l~~~ 336 (367)
T cd08263 315 AR--PRQDLPELVGLAASGKLDPE 336 (367)
T ss_pred CC--cHHHHHHHHHHHHcCCCCcc
Confidence 22 24689999999999998864
No 51
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=7.2e-39 Score=303.56 Aligned_cols=287 Identities=18% Similarity=0.197 Sum_probs=242.3
Q ss_pred eeEEEeccCCC-----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022 17 CRAAIATAPGE-----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (362)
Q Consensus 17 ~ka~~~~~~~~-----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~ 90 (362)
|||+++.+++. .++++++|.|.|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 78999998874 3888899999999999999999999999999998886643 45789999999999999999998
Q ss_pred C-CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 018022 91 G-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (362)
Q Consensus 91 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~ 169 (362)
+ |++||+|+..+. .+ |+|+||+.+|.+.+++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~~-------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------SY-------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------CC-------------------CcchheeeecHHHeEE
Confidence 6 999999975321 01 3999999999999999
Q ss_pred cCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEE-C-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC
Q 018022 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-G-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (362)
Q Consensus 170 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~-G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~ 247 (362)
+|+++++++++.+.+...|||. +...... ++++++|+ | +|++|++++|+|+.+|+ +|++++++++|+++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 9999999999988888899975 4455555 55566665 5 59999999999999999 89999999999999999999
Q ss_pred cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 018022 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL 326 (362)
Q Consensus 248 ~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i 326 (362)
++++++++ .++.+.+++++++ ++|++||++|+.. ....+++++++ |+++.+|.........++...++.+++++
T Consensus 190 ~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08291 190 EYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSI 264 (324)
T ss_pred cEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEE
Confidence 99999887 7888999998877 9999999999876 67789999997 99999997433222236667778899999
Q ss_pred EEeeccCCC---ccccHHHHHHHHHcCCcccceeccc
Q 018022 327 MGSLFGGLK---AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 327 ~g~~~~~~~---~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.+++++.+. ..+++++++++++ +++++.++++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~ 300 (324)
T cd08291 265 EGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRY 300 (324)
T ss_pred EEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEE
Confidence 999876543 2457889999998 99999988876
No 52
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1e-38 Score=303.31 Aligned_cols=307 Identities=27% Similarity=0.369 Sum_probs=261.1
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++++++++++|.|++.++|++||++++++|++|+..+.|..+..++|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 78999999998899999999999999999999999999999998888766556788999999999999999998899999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|++.+..+|+.|.+|..+..+.|....+ +|...+| +|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCH
Confidence 99999889999999999999999988654 3433444 9999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
.+++.+.+.+.+||+++... .++++++|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++ ++++++.+
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987554 8999999999998 9999999999999999 899999999999999888 66666543
Q ss_pred CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (362)
++.+.++++ + ++|++|||+|+.. +..+++.++++ |+++.+|.......++++...++.+++++.++...
T Consensus 215 ----~~~~~v~~~-~-~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 283 (334)
T PRK13771 215 ----KFSEEVKKI-G-GADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA--- 283 (334)
T ss_pred ----hHHHHHHhc-C-CCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---
Confidence 345556554 3 6999999999865 88999999997 99999997533222234444456678999887432
Q ss_pred ccccHHHHHHHHHcCCcccceeccc
Q 018022 336 AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 336 ~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.++++++++++++++.+++.+..+|
T Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (334)
T PRK13771 284 TKRDVEEALKLVAEGKIKPVIGAEV 308 (334)
T ss_pred CHHHHHHHHHHHHcCCCcceEeeeE
Confidence 3688999999999999987655443
No 53
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.2e-38 Score=300.50 Aligned_cols=307 Identities=29% Similarity=0.494 Sum_probs=264.9
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++..++. +++++++.|++.++||+|||.++++|+.|...+.+..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 78999998876 99999999999999999999999999999999888765556688999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|+..+..+|+.|..|..++.++|.+... .+....| +|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRDG-------------------GFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCCC-------------------cceeEEEechh-eEECCCCCCH
Confidence 99999999999999999999999954332 2222233 99999999999 9999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
++++++ ..+.++++++ ...++.++++|||+|+|.+|.+++++|+.+|+ +|+++.+++++.+.++++|+++++++++
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999877 4778888875 78899999999999889999999999999999 8999988999999999999999999887
Q ss_pred CCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (362)
.++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|... ....++...++.+++++.++.. .
T Consensus 213 --~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---~ 284 (337)
T cd08261 213 --EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSRN---A 284 (337)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEecc---C
Confidence 6788888888776 8999999999877789999999997 9999998753 2345566667778898887642 2
Q ss_pred ccccHHHHHHHHHcCCccc--ceecc
Q 018022 336 AKSDIPILLKRYMDKWSYV--PFSGT 359 (362)
Q Consensus 336 ~~~~l~~~l~~~~~g~l~~--~~~~~ 359 (362)
..+.++++++++++|.+++ .+..+
T Consensus 285 ~~~~~~~~~~l~~~~~i~~~~~~~~~ 310 (337)
T cd08261 285 TREDFPDVIDLLESGKVDPEALITHR 310 (337)
T ss_pred ChhhHHHHHHHHHcCCCChhhheEEE
Confidence 3578999999999999987 44443
No 54
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.9e-38 Score=309.06 Aligned_cols=320 Identities=21% Similarity=0.214 Sum_probs=263.8
Q ss_pred CCcceeeEEEecc--CCC---ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC----------CCCCC-cccc
Q 018022 12 GKPIQCRAAIATA--PGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFP-RILG 75 (362)
Q Consensus 12 ~~~~~~ka~~~~~--~~~---~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~----------~~~~p-~~~G 75 (362)
..|.+|||+++.. +++ .+++++++.|.|+++||+||+.++++|++|.....+... ....| .++|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 82 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG 82 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence 4567899999965 443 399999999999999999999999999999876655321 11223 3799
Q ss_pred ccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceeccccccc
Q 018022 76 HEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVS 154 (362)
Q Consensus 76 ~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g 154 (362)
||++|+|+++|++++.|++||+|++.+...|++|+.|+.++.++|..... .|. +.+ |
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~-------------------g 140 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF-------------------G 140 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC-------------------c
Confidence 99999999999999999999999999999999999999999999976543 121 122 4
Q ss_pred ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHH--hcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEE
Q 018022 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIG 231 (362)
Q Consensus 155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~ 231 (362)
+|++|+.++.+.++++|+++++++++.+.+.+.+||+++.. ..++.++++|+|+|+ |.+|++++++|+.+|+ ++++
T Consensus 141 ~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~ 219 (398)
T TIGR01751 141 SFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVA 219 (398)
T ss_pred cceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEE
Confidence 99999999999999999999999999999899999998654 477899999999998 9999999999999999 7788
Q ss_pred EcCCchHHHHHHhcCCcEEEcCCCCC-------------------CccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHH
Q 018022 232 VDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYA 291 (362)
Q Consensus 232 ~~~~~~~~~~~~~~g~~~vv~~~~~~-------------------~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~ 291 (362)
+++++++.+.++++|++.++|++++. ...+.+.+.+++++ ++|++|||+|.. .+..+++
T Consensus 220 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~ 298 (398)
T TIGR01751 220 VVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVF 298 (398)
T ss_pred EcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHH
Confidence 88889999999999999999875410 01245667777776 899999999975 4889999
Q ss_pred HhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022 292 CCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 292 ~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
+++++ |+++.+|... .....++...++.++.++.++.++. .+++++++++++++++++.+..++
T Consensus 299 ~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~ 362 (398)
T TIGR01751 299 VCRRG-GMVVICGGTT-GYNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPTLSKVY 362 (398)
T ss_pred hhccC-CEEEEEcccc-CCCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccceeeEE
Confidence 99997 9999999853 3334666777777888898886554 366889999999999987665544
No 55
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.7e-38 Score=300.99 Aligned_cols=304 Identities=30% Similarity=0.421 Sum_probs=260.2
Q ss_pred eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||++++++++ +++++.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+++.++++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 78999998887 99999999996 8999999999999999999888876542 458899999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~ 173 (362)
|+|+.....+|++|..|..++.+.|.+..+ +|...+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCC
Confidence 999986778899999999999999987654 4444555 99999999975 99999999
Q ss_pred CCccchh-----ccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022 174 VPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (362)
Q Consensus 174 l~~~~aa-----~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~ 248 (362)
++++.+. .+...+.+||+++ ...++++|++|+|.|+|.+|++++++|+++|++.++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9873222 1224678899876 578899999999998899999999999999996799999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022 249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (362)
Q Consensus 249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 327 (362)
++++++. .++.+.+.+++++ ++|+++|++|++..++.++++++++ |+++.+|.... ...+++...+.+++++.
T Consensus 216 ~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~ 289 (345)
T cd08287 216 DIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLA 289 (345)
T ss_pred eEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEE
Confidence 9999887 6788888888776 8999999999887799999999997 99999987542 34566656678899998
Q ss_pred EeeccCCCccccHHHHHHHHHcCCccc
Q 018022 328 GSLFGGLKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 328 g~~~~~~~~~~~l~~~l~~~~~g~l~~ 354 (362)
+.... ..+.+++++++++++++++
T Consensus 290 ~~~~~---~~~~~~~~~~~~~~~~l~~ 313 (345)
T cd08287 290 GGPAP---VRRYLPELLDDVLAGRINP 313 (345)
T ss_pred EecCC---cHHHHHHHHHHHHcCCCCH
Confidence 86422 2578999999999999986
No 56
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.1e-38 Score=302.07 Aligned_cols=309 Identities=21% Similarity=0.328 Sum_probs=261.5
Q ss_pred eEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 018022 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (362)
Q Consensus 18 ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~ 97 (362)
|+++++.++..|++++++.|+|.++||+||++++++|++|...+.|......+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57888988887999999999999999999999999999999999887655667999999999999999999999999999
Q ss_pred EEe-eCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 98 VIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 98 V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
|++ .....|+.|.+|++++.++|....+.. .|+...+ ....|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCCCH
Confidence 984 445579999999999999998766421 1211111 122359999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
++++.+.+.+.+||+++ ...++++|++++|.|+|.+|++++++|+.+|+ +++++++++++.+.++++|++.+++.+.
T Consensus 146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 99999999999999976 45568999999998889999999999999999 9999999999999999999999988765
Q ss_pred CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 336 (362)
.++.+. .++++|++|||+|....+..++++++++ |+++.+|.... ..++++..++.+++++.+++.+.
T Consensus 223 --~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~--- 290 (337)
T cd05283 223 --PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE--PLPVPPFPLIFGRKSVAGSLIGG--- 290 (337)
T ss_pred --hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC--CCccCHHHHhcCceEEEEecccC---
Confidence 333221 2348999999999886689999999997 99999997533 23667777788999999987653
Q ss_pred cccHHHHHHHHHcCCcccce
Q 018022 337 KSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 337 ~~~l~~~l~~~~~g~l~~~~ 356 (362)
.+++++++++++++++++.+
T Consensus 291 ~~~~~~~~~~~~~~~l~~~~ 310 (337)
T cd05283 291 RKETQEMLDFAAEHGIKPWV 310 (337)
T ss_pred HHHHHHHHHHHHhCCCccce
Confidence 47899999999999998754
No 57
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.1e-38 Score=301.24 Aligned_cols=310 Identities=23% Similarity=0.346 Sum_probs=257.7
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~---~~~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
||++++..+++.++++++|.|.|+++||+||++++++|++|..++.+.. ....+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999888779999999999999999999999999999998776532 1234678999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..+..+|..|..|..+..++|+...+ .+...+| +|++|+.++.++++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------------AFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------------cceeeEEechHHeEECcCC
Confidence 99999999999999999999999999976542 3333344 9999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+++++++.+ ..+.++++++.. ...+|++|+|.|+|.+|++++++|+++|+.+|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888755 366666665432 34689999999889999999999999999678888889999999999999999988
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
++ .++.+.+++++++ ++|++|||+|....++.++++++++ |+++.+|.... ..+++...++.+++++.++...
T Consensus 216 ~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~ 289 (341)
T PRK05396 216 AK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGR 289 (341)
T ss_pred cc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEcc
Confidence 76 6788888888776 9999999999888799999999997 99999997543 3445567778889999887532
Q ss_pred CCCccccHHHHHHHHHcC-Ccccceecc
Q 018022 333 GLKAKSDIPILLKRYMDK-WSYVPFSGT 359 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g-~l~~~~~~~ 359 (362)
. ..+.+..++++++++ ++.+.+..+
T Consensus 290 ~--~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (341)
T PRK05396 290 E--MFETWYKMSALLQSGLDLSPIITHR 315 (341)
T ss_pred C--ccchHHHHHHHHHcCCChhHheEEE
Confidence 2 235577788999888 454444443
No 58
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=5e-38 Score=304.73 Aligned_cols=311 Identities=23% Similarity=0.359 Sum_probs=257.7
Q ss_pred ceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC------C-CCCCCccccccceEEEEEeCC
Q 018022 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD------F-PAVFPRILGHEAIGVVESVGE 87 (362)
Q Consensus 15 ~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~------~-~~~~p~~~G~e~~G~Vv~vG~ 87 (362)
..+.+.++... . ++++++|.|+++++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++|+
T Consensus 27 ~~~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 104 (384)
T cd08265 27 TNLGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGK 104 (384)
T ss_pred ccceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECC
Confidence 44666666644 3 9999999999999999999999999999998876321 1 135688999999999999999
Q ss_pred CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (362)
Q Consensus 88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~ 167 (362)
+++.|++||+|++.+..+|+.|..|+.++.++|.+... .|...+| +|++|+.++.+.+
T Consensus 105 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~ 162 (384)
T cd08265 105 NVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYA 162 (384)
T ss_pred CCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHe
Confidence 99999999999999999999999999999999987553 4444445 9999999999999
Q ss_pred EEcCCCC-------CccchhccccchhhhHHHHHHh-cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022 168 VKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF 239 (362)
Q Consensus 168 ~~~P~~l-------~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~ 239 (362)
+++|+++ +.+ ++++..++++||+++... .++++|++|+|+|+|.+|++++++|+.+|+.+|++++++++|.
T Consensus 163 ~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~ 241 (384)
T cd08265 163 WEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERR 241 (384)
T ss_pred EECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 9999863 445 445555889999987665 6899999999998899999999999999987899999999999
Q ss_pred HHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022 240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317 (362)
Q Consensus 240 ~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~ 317 (362)
++++++|+++++++++....++.+.+++++++ ++|+++|++|.+ ..+..+++.++++ |+++.+|.... ..++++.
T Consensus 242 ~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~ 318 (384)
T cd08265 242 NLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLE 318 (384)
T ss_pred HHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHH
Confidence 99999999999987741113678888888887 999999999974 4578999999997 99999996432 3456666
Q ss_pred HHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022 318 EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
.+..+..++.++.... ....+++++++++++.+++.
T Consensus 319 ~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~ 354 (384)
T cd08265 319 VLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMT 354 (384)
T ss_pred HHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChH
Confidence 6777788888875322 24679999999999999864
No 59
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=6.2e-38 Score=298.49 Aligned_cols=307 Identities=24% Similarity=0.374 Sum_probs=260.6
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.++++...++++|.|.+.++||+|||.++++|++|...+.|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 799999998874448999999999999999999999999999988776543 3478999999999999999999999999
Q ss_pred EEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 97 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
+|++.+ ..+|+.|..|..+..++|.+... .|...+| +|++|+.++.++++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCC
Confidence 999765 55799999999999999987654 4444455 999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
+.+++.+++.+.|||+++ ..+++++|++|||+|+|++|++++++|+. +|+ +|+++++++++.+.++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999986 77899999999999999999999999998 599 899999999999999999999998875
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
. ..++.+.+++..+ ++|.++++.++...+..++++++++ |+++.+|... ...+++...+..++.++.+++++.
T Consensus 216 ~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~- 288 (338)
T PRK09422 216 R--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP--ESMDLSIPRLVLDGIEVVGSLVGT- 288 (338)
T ss_pred c--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC--CCceecHHHHhhcCcEEEEecCCC-
Confidence 3 1456677777766 6896666666666799999999997 9999999753 234566667777889998875433
Q ss_pred CccccHHHHHHHHHcCCccccee
Q 018022 335 KAKSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 335 ~~~~~l~~~l~~~~~g~l~~~~~ 357 (362)
+++++.+++++++|++++.+.
T Consensus 289 --~~~~~~~~~l~~~g~l~~~v~ 309 (338)
T PRK09422 289 --RQDLEEAFQFGAEGKVVPKVQ 309 (338)
T ss_pred --HHHHHHHHHHHHhCCCCccEE
Confidence 478999999999999876544
No 60
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=9.6e-38 Score=300.58 Aligned_cols=308 Identities=27% Similarity=0.421 Sum_probs=254.2
Q ss_pred CcceeeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCC
Q 018022 13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENV 89 (362)
Q Consensus 13 ~~~~~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v 89 (362)
...+|+++++.+++. +++++++.|.|.++||+||+.++++|++|+..+.+... ...+|.++|||++|+|+++|+++
T Consensus 14 ~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
T PLN02702 14 VEEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV 92 (364)
T ss_pred cccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence 445677777777766 99999999999999999999999999999998876321 12357899999999999999999
Q ss_pred CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceE
Q 018022 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (362)
Q Consensus 90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~ 168 (362)
++|++||+|+..+..+|+.|..|..+..+.|++..+ ++.. .+ |+|++|+.++.+.++
T Consensus 93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~-------------------g~~~~y~~v~~~~~~ 150 (364)
T PLN02702 93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVH-------------------GSLANQVVHPADLCF 150 (364)
T ss_pred CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCC-------------------CcccceEEcchHHeE
Confidence 999999999999999999999999999999987443 1111 12 499999999999999
Q ss_pred EcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (362)
Q Consensus 169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~ 248 (362)
++|++++++++++.. .+.++|+++ ...++.++++|+|+|+|++|++++++|+.+|++.+++++++++|.++++++|++
T Consensus 151 ~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~ 228 (364)
T PLN02702 151 KLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGAD 228 (364)
T ss_pred ECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC
Confidence 999999999887632 455578765 778899999999999899999999999999997789999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHhh---cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022 249 EFVNSKNCGDKSVSQIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (362)
Q Consensus 249 ~vv~~~~~~~~~~~~~i~~~---~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 325 (362)
+++++.. ...++.+.+.++ .++++|++||++|+...+..++++++++ |+++.+|.... ...++...+..++++
T Consensus 229 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~ 304 (364)
T PLN02702 229 EIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVD 304 (364)
T ss_pred EEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccE
Confidence 8876532 114566666654 2338999999999877799999999997 99999997432 245566678888999
Q ss_pred EEEeeccCCCccccHHHHHHHHHcCCcc
Q 018022 326 LMGSLFGGLKAKSDIPILLKRYMDKWSY 353 (362)
Q Consensus 326 i~g~~~~~~~~~~~l~~~l~~~~~g~l~ 353 (362)
+.+++.. ...++++++++++++++
T Consensus 305 i~~~~~~----~~~~~~~~~~~~~~~l~ 328 (364)
T PLN02702 305 VVGVFRY----RNTWPLCLEFLRSGKID 328 (364)
T ss_pred EEEeccC----hHHHHHHHHHHHcCCCC
Confidence 9987632 36789999999999986
No 61
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=9.1e-38 Score=297.91 Aligned_cols=306 Identities=27% Similarity=0.389 Sum_probs=265.1
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++. +.+++.+.|.+.+++|+|||.++++|+.|..++.+..+....|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999998886 99999999999999999999999999999998887664345578999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc-----eEEcC
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-----VVKVD 171 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~-----~~~~P 171 (362)
+|+..+..+|+.|..|..+..++|....+ .|...+| +|++|+.++.++ ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG-------------------GFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------------cceeeEEecccccccccEEECC
Confidence 99999999999999999999999977654 3333334 999999999998 99999
Q ss_pred CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (362)
Q Consensus 172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv 251 (362)
+++++.+++++ +.+.+||+++. ..++++|++|+|+|+|.+|++++++|+..|++.++++++++++.+.++++|.++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999999876 68899999874 45899999999998899999999999999994499999999999999999999999
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (362)
++++ .++.+.+++++++ ++|++||++++...+...+++++++ |+++.+|.........+++..+..+++.+.++.
T Consensus 216 ~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (343)
T cd08235 216 DAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSY 291 (343)
T ss_pred cCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEe
Confidence 9887 7788888888777 8999999999876689999999997 999999875443345666677788899988765
Q ss_pred ccCCCccccHHHHHHHHHcCCccc
Q 018022 331 FGGLKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 331 ~~~~~~~~~l~~~l~~~~~g~l~~ 354 (362)
.. ..+.+++++++++++.|.+
T Consensus 292 ~~---~~~~~~~~~~l~~~~~l~~ 312 (343)
T cd08235 292 AA---SPEDYKEALELIASGKIDV 312 (343)
T ss_pred cC---ChhhHHHHHHHHHcCCCCh
Confidence 33 2478999999999999863
No 62
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1e-37 Score=297.68 Aligned_cols=308 Identities=25% Similarity=0.375 Sum_probs=260.2
Q ss_pred eeEEEeccCCCceEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++.+++. +++++++.|+|. ++||+||+.++++|+.|...+.|..+ ..+|.++|+|++|+|+++|++++++++|
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 68999998865 999999999985 99999999999999999988877654 3457899999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~ 173 (362)
|+|+..+..+|+.|.+|..+..+.|++... .|.... ....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS---------------PNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccccc---------------CCCCCceeEEEEcccccCceEECCCC
Confidence 999999999999999999999999976533 111000 0113499999999864 99999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+++++++.+++++.|||+++. ..++.++++|+|+|+|.+|++++++|+.+|+.+|+++++.+++.++++++|+. +++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999874 58899999999998899999999999999976899998889999999999975 4666
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
+. .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.... .....+....+.+++++.+..
T Consensus 219 ~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-- 291 (344)
T cd08284 219 ED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFGR-- 291 (344)
T ss_pred CC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEec--
Confidence 55 5678888888876 9999999999877799999999997 99999997542 334556666777899887653
Q ss_pred CCCccccHHHHHHHHHcCCccc
Q 018022 333 GLKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g~l~~ 354 (362)
....+.+++++++++++++++
T Consensus 292 -~~~~~~~~~~~~~~~~~~i~~ 312 (344)
T cd08284 292 -CPVRSLFPELLPLLESGRLDL 312 (344)
T ss_pred -CCcchhHHHHHHHHHcCCCCh
Confidence 223688999999999999876
No 63
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.2e-37 Score=301.02 Aligned_cols=316 Identities=24% Similarity=0.331 Sum_probs=258.8
Q ss_pred eeEEEeccCCCceEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~-~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
||++++.+++. ++++++|.|++ +++||+|||++++||++|+..+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 68999998875 99999999996 799999999999999999999988765 3568999999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~--~~~~~P~~ 173 (362)
|+|+..+..+|+.|..|..++.++|.+.... .+....| .++ ..-..|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~--~~~~~~~------~~~----~~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG--RAGGAYG------YVD----MGPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc--ccccccc------ccc----cCCCCCeeeeEEEeecccCcEEECCCC
Confidence 9999999999999999999999999864321 0000001 000 00012499999999976 89999999
Q ss_pred CCcc---chhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022 174 VPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (362)
Q Consensus 174 l~~~---~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v 250 (362)
++++ +++.+...+++||+++ ..+++.+|++|+|.|+|.+|++++|+|+++|+.+|++++++++|.++++++|+ ..
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence 9998 4677777899999987 78899999999999889999999999999998678889999999999999998 45
Q ss_pred EcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH-----------HHHHHHHHhccCCceEEEEccCCCC----------
Q 018022 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-----------LVQEAYACCRKGWGKTIVLGVDQPG---------- 309 (362)
Q Consensus 251 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~-----------~~~~~~~~l~~~~G~iv~~G~~~~~---------- 309 (362)
+++++ .++.+.+.+++++++|++|||+|... .+..++++++++ |+++.+|.....
T Consensus 225 v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~ 300 (375)
T cd08282 225 IDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAK 300 (375)
T ss_pred eccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccccc
Confidence 67665 67788888776667999999999763 478999999997 999988864311
Q ss_pred -CccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022 310 -SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 310 -~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
....+++..+..++..+.++... .++.+++++++++++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~ 344 (375)
T cd08282 301 QGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPS 344 (375)
T ss_pred CccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChH
Confidence 12345667777788888776432 35789999999999999873
No 64
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.7e-37 Score=296.00 Aligned_cols=308 Identities=28% Similarity=0.418 Sum_probs=267.9
Q ss_pred eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
|||+++.+++ ..+++++++.|.|.++||+||+.++++|++|..++.+..+. ...|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7999999887 33999999999999999999999999999999988876543 345778999999999999999999999
Q ss_pred CCEEEeeC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 95 GDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 95 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
||+|+..+ ...|+.|.+|..++.++|.+..+ .|+...| +|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCC
Confidence 99999876 67799999999999999988765 3433344 8999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++..+++.+++.+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++++++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999988899999998654 58999999999998 6799999999999999 9999999999999999999999999
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
+++ .++.+.+.+.+++ ++|++||+.+....+..++++++++ |+++.+|... ....++++..++.+++++.++..
T Consensus 217 ~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 217 FKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred CCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEecc
Confidence 877 6788888888766 8999999888777789999999997 9999999754 33446777777889999998654
Q ss_pred cCCCccccHHHHHHHHHcCCcccce
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~~~ 356 (362)
+. .+++++++++++++++++.+
T Consensus 292 ~~---~~~~~~~~~~~~~~~l~~~~ 313 (341)
T cd08297 292 GT---RQDLQEALEFAARGKVKPHI 313 (341)
T ss_pred CC---HHHHHHHHHHHHcCCCccee
Confidence 32 47899999999999998754
No 65
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.9e-37 Score=294.49 Aligned_cols=306 Identities=30% Similarity=0.449 Sum_probs=266.9
Q ss_pred eeEEEeccCCCc-eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC-CCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 17 CRAAIATAPGEP-LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 17 ~ka~~~~~~~~~-l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~-~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
||++++..++++ +.+.+.+.|.+.+++|+||+.++++|+.|...+.+..+ ...+|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999987 68888889999999999999999999999999888765 2456889999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+..|..+|+.|.+|..++.++|..... .|...+| +|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999966543 3433344 99999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
+.++++.+...+.+||+++....+++++++|||.|+|.+|++++++|+.+|+ +|++++.++++.+.++++|.+++++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999989999999988788889999999999889999999999999999 799999999999999999999988877
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
+ ..+.+.+ ....+ ++|++|||+|....++.++++++++ |+++.+|.... ...++...++.++.++.+++..
T Consensus 218 ~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~- 289 (338)
T cd08254 218 D---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG- 289 (338)
T ss_pred C---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC-
Confidence 6 5566666 44555 8999999999887789999999997 99999987432 3456667788889999987543
Q ss_pred CCccccHHHHHHHHHcCCcccc
Q 018022 334 LKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 334 ~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
..+.++.++++++++.|++.
T Consensus 290 --~~~~~~~~~~ll~~~~l~~~ 309 (338)
T cd08254 290 --TPEDLPEVLDLIAKGKLDPQ 309 (338)
T ss_pred --CHHHHHHHHHHHHcCCCccc
Confidence 35789999999999999875
No 66
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.3e-37 Score=292.93 Aligned_cols=301 Identities=26% Similarity=0.339 Sum_probs=251.2
Q ss_pred eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899998766 34888898888899999999999999999999887642 222457889999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|+..+...|+.|..|..++.++|++..+ .|....| +|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCC
Confidence 999999999999999999999999987654 3333334 999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
+++++.+++.+.+||+++. ..+++++++|+|+|+ |++|++++++|+.+|+ +++++++ .+.++++|++++++++
T Consensus 138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence 9999999999999999864 489999999999998 9999999999999999 7888762 3677889998888765
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
+ ..+.+++++ +++|+++|++|.. .+..++++++++ |+++.+|.. ......+++..++.++.++.++..+.
T Consensus 212 ~-----~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (325)
T cd08264 212 E-----VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGGT- 281 (325)
T ss_pred H-----HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCCC-
Confidence 4 355566666 6899999999975 589999999997 999999974 23346777788888899999876543
Q ss_pred CccccHHHHHHHHHcCCcccceeccc
Q 018022 335 KAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 335 ~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
+++++++++++...+ +.+..+|
T Consensus 282 --~~~~~~~~~l~~~~~--~~~~~~~ 303 (325)
T cd08264 282 --RKELLELVKIAKDLK--VKVWKTF 303 (325)
T ss_pred --HHHHHHHHHHHHcCC--ceeEEEE
Confidence 578999999996444 4444443
No 67
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2.4e-37 Score=292.32 Aligned_cols=287 Identities=23% Similarity=0.253 Sum_probs=246.6
Q ss_pred eeEEEeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 018022 17 CRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (362)
Q Consensus 17 ~ka~~~~~~~~~---l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~ 92 (362)
|||+++.+++.+ ++++++|.|.+.++||+|||.++++|++|+..+.|..+. ..+|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 789999888753 788999999999999999999999999999998887652 4568899999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
++||+|+..+. .|+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence 99999975421 13899999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv 251 (362)
++++++++.+++.+.++|+++ ...++++|++|||+|+ |.+|++++++|+.+|+ .++++..++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999888889999975 5688999999999987 9999999999999999 888888888888888889999999
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (362)
++++ .++.+.+.+++++ ++|++||++|+.. ...++++++++ |+++.+|... ....++++..++.+++++.++.
T Consensus 190 ~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 263 (324)
T cd08292 190 STEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFW 263 (324)
T ss_pred cCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEE
Confidence 8876 7788889998887 9999999999865 78999999997 9999999742 3345667766778899999987
Q ss_pred ccCCC-------ccccHHHHHHHHHcCCcccceeccc
Q 018022 331 FGGLK-------AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 331 ~~~~~-------~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
...+. ..+.++++++++++|++++.+..+|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~ 300 (324)
T cd08292 264 GGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVF 300 (324)
T ss_pred cHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEe
Confidence 65432 1356899999999999987665544
No 68
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.6e-37 Score=293.44 Aligned_cols=301 Identities=30% Similarity=0.465 Sum_probs=254.0
Q ss_pred EEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC-CC--CCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FP--AVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 19 a~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~-~~--~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|+++++++. +++++.+.|.+.++||+|||.++++|+.|...+.+.. .. ..+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467888865 9999999999999999999999999999988764321 11 2457789999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|+..+..+|+.|..|+.+.+++|++..+. .....+| +|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVDG-------------------TLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCCC-------------------ceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999865431 0111233 999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
+++++++ ..+.+||+++ ...+++++++|+|+|+|.+|++++++|+.+|+++|+++++++++.+.++++|+++++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998877 4788899875 8899999999999988999999999999999955999999999999999999999998876
Q ss_pred CCCcc---HHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 256 CGDKS---VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 256 ~~~~~---~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
.+ +.+.+.+.+++ ++|++|||+|+...++..+++++++ |+++.+|.... ...+++..+..+++.+.++..
T Consensus 217 ---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd05285 217 ---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP--EVTLPLSAASLREIDIRGVFR 290 (343)
T ss_pred ---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHhhCCcEEEEecc
Confidence 44 37778777776 8999999999876689999999997 99999986432 245566677788899888643
Q ss_pred cCCCccccHHHHHHHHHcCCcc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSY 353 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~ 353 (362)
. .+.+++++++++++++.
T Consensus 291 ~----~~~~~~~~~~l~~~~l~ 308 (343)
T cd05285 291 Y----ANTYPTAIELLASGKVD 308 (343)
T ss_pred C----hHHHHHHHHHHHcCCCC
Confidence 2 27789999999999875
No 69
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=6e-37 Score=290.60 Aligned_cols=312 Identities=22% Similarity=0.326 Sum_probs=264.8
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++...+.+ +++.+.+.|.+.+++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 689999844322 788888888889999999999999999999988876542 35688999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|++.+..+|+.|.+|..++++.|+...+ .|....| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999987543 4443344 8999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
+++++++.+++.+.+||+++.+..++.++++++|+|+ +.+|++++++++..|+ +++++++++++.+.+++++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999998899999998878889999999999998 7999999999999999 8999999999999998888888887
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
..+ .++.+.+.+.+.+ ++|++++++|... +...++.++++ |+++.+|.... ....+++...+.+++++.++..
T Consensus 218 ~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
T cd08266 218 YRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTG-YEAPIDLRHVFWRQLSILGSTM 291 (342)
T ss_pred cCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCC-CCCCcCHHHHhhcceEEEEEec
Confidence 665 5677777777666 8999999999865 88999999997 99999987533 2345666556778999988764
Q ss_pred cCCCccccHHHHHHHHHcCCcccceeccc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.. ..++.+++++++++.+++.+..+|
T Consensus 292 ~~---~~~~~~~~~~l~~~~l~~~~~~~~ 317 (342)
T cd08266 292 GT---KAELDEALRLVFRGKLKPVIDSVF 317 (342)
T ss_pred CC---HHHHHHHHHHHHcCCcccceeeeE
Confidence 33 468899999999999887654443
No 70
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.2e-36 Score=288.19 Aligned_cols=307 Identities=31% Similarity=0.462 Sum_probs=259.3
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++..+++++.++++|.|.+.++||+|||+++++|++|...+.|..+....|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999988555699999999999999999999999999999999888766556788999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|+..+...|+.|.+|..++.++|++.. ..|....| +|++|++++...++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG-------------------GFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC-------------------eeeeEEEechhheEECCCCCCH
Confidence 9999999999999999999999998752 24443344 9999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
++++.+++++.+||+++.. ..+.++++++|+|+ |.+|++++++++..|. +++++.+++++.+.+++++.+.+++.+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~- 215 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS- 215 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH-
Confidence 9999999999999998766 88999999999998 9999999999999999 889998889999999889988777543
Q ss_pred CCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC
Q 018022 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (362)
. +.+.+.+.. ++|++++++|... ...++++++++ |+++.+|..... ...++......++..+.++.. .
T Consensus 216 ---~-~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~ 283 (332)
T cd08259 216 ---K-FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSIS---A 283 (332)
T ss_pred ---H-HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecC---C
Confidence 2 555555543 6999999999876 88999999997 999999874322 222344444467888887642 2
Q ss_pred ccccHHHHHHHHHcCCcccceeccc
Q 018022 336 AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 336 ~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
..+++++++++++++.|++.+..+|
T Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (332)
T cd08259 284 TKADVEEALKLVKEGKIKPVIDRVV 308 (332)
T ss_pred CHHHHHHHHHHHHcCCCccceeEEE
Confidence 3578999999999999987665443
No 71
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=9.2e-37 Score=288.25 Aligned_cols=291 Identities=23% Similarity=0.357 Sum_probs=246.2
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.++++ +++++++.|+++++||+|||.++++|++|...+.|..+ .|.++|+|++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 68999998875 99999999999999999999999999999998887653 5889999999999999987 78999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
+|...+..+|+.|.+|..+.+++|..... .+. ..+| +|++|+.++.++++++|++++
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~ 131 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG-------------------AFAEYLTLPLENLHVVPDLVP 131 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------------ceEEEEEechHHeEECcCCCC
Confidence 99999999999999999999999987654 232 1234 999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~ 255 (362)
.++++.+ ..+.++|. +.+..+++++++|+|+|+|.+|++++|+|+.+|+ ++++++.++++.+.++++|++.++++++
T Consensus 132 ~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~ 208 (319)
T cd08242 132 DEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA 208 (319)
T ss_pred HHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc
Confidence 9888764 35556665 4577889999999999889999999999999999 7999999999999999999998887654
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 256 ~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
. +.+ ++|++||++|+...++.++++++++ |+++.++... ....+++..+..+++++.++..+
T Consensus 209 ---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~-- 271 (319)
T cd08242 209 ---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA--GPASFDLTKAVVNEITLVGSRCG-- 271 (319)
T ss_pred ---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC--CCCccCHHHheecceEEEEEecc--
Confidence 1 233 8999999999877789999999997 9999987643 23566777778889999987532
Q ss_pred CccccHHHHHHHHHcCCcc--cceeccc
Q 018022 335 KAKSDIPILLKRYMDKWSY--VPFSGTR 360 (362)
Q Consensus 335 ~~~~~l~~~l~~~~~g~l~--~~~~~~~ 360 (362)
.++++++++++++|+ +.+..+|
T Consensus 272 ----~~~~~~~~~~~~~l~~~~~~~~~~ 295 (319)
T cd08242 272 ----PFAPALRLLRKGLVDVDPLITAVY 295 (319)
T ss_pred ----cHHHHHHHHHcCCCChhhceEEEE
Confidence 388999999999994 3344443
No 72
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.1e-36 Score=288.63 Aligned_cols=306 Identities=27% Similarity=0.450 Sum_probs=260.1
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++. +.+++.+.|++.++||+||+.++++|++|...+.+..+ ...|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 78999999876 99999999999999999999999999999988877652 34578999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|+..+...|+.|.+|..+....|+.... +|...+| +|++|+.++.++++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG-------------------AFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------------cccceEEechHHeEECcCCCCH
Confidence 99999999999999999999999977543 3333334 9999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
++++++ ..+.+||+++. ...++++++|+|+|+|.+|.+++++|+.+|++.++++++++++.++++++|++.++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999887 47889999874 788999999999988999999999999999955999999999999999999999998876
Q ss_pred CCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc-ccCHHHHHhcCcEEEEeeccCC
Q 018022 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
.. .+.+.+..++ ++|++|||+|....+..++++++++ |+++.+|.......+ ..++..++.++.++.++.+...
T Consensus 214 --~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (343)
T cd08236 214 --ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYS 289 (343)
T ss_pred --cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccc
Confidence 45 6677777776 8999999999877789999999997 999999975432112 2344556678999999876432
Q ss_pred C--ccccHHHHHHHHHcCCcc
Q 018022 335 K--AKSDIPILLKRYMDKWSY 353 (362)
Q Consensus 335 ~--~~~~l~~~l~~~~~g~l~ 353 (362)
. ..+.+++++++++++++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~l~ 310 (343)
T cd08236 290 APFPGDEWRTALDLLASGKIK 310 (343)
T ss_pred cccchhhHHHHHHHHHcCCCC
Confidence 1 146788999999999986
No 73
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-36 Score=291.48 Aligned_cols=291 Identities=17% Similarity=0.203 Sum_probs=235.0
Q ss_pred CCcceeeEEEeccCC------CceEEEE---eecCC-CCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccc--cce
Q 018022 12 GKPIQCRAAIATAPG------EPLVIDE---VIVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH--EAI 79 (362)
Q Consensus 12 ~~~~~~ka~~~~~~~------~~l~l~~---~~~p~-~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~--e~~ 79 (362)
.+.+++|++++...- ++|++++ ++.|. +++|||||||.+++||+.|...+.+.......|.++|+ |++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~ 83 (348)
T PLN03154 4 GQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGF 83 (348)
T ss_pred CccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEee
Confidence 445667888885421 1188877 46663 48999999999999999987654432222345889998 889
Q ss_pred EEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeee
Q 018022 80 GVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEY 159 (362)
Q Consensus 80 G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y 159 (362)
|+|+.+|+++++|++||+|+.. |+|+||
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey 111 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEY 111 (348)
T ss_pred EEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEE
Confidence 9999999999999999999621 289999
Q ss_pred EEeecCc--eEE--cCCCCCcc-chhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022 160 TVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (362)
Q Consensus 160 ~~v~~~~--~~~--~P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~ 233 (362)
+.++.+. +++ +|++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++
T Consensus 112 ~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~ 190 (348)
T PLN03154 112 SLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 190 (348)
T ss_pred EEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEc
Confidence 9998753 544 48999986 677889999999999878889999999999998 9999999999999999 899999
Q ss_pred CCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc
Q 018022 234 VISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312 (362)
Q Consensus 234 ~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~ 312 (362)
+++++.+.++ ++|+++++++++ ..++.+.+++++++++|++||++|+. .+..++++++++ |+++.+|..... ..
T Consensus 191 ~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~ 265 (348)
T PLN03154 191 GSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLN-SL 265 (348)
T ss_pred CCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccC-CC
Confidence 9999999987 799999999864 13677888887766899999999975 589999999997 999999975322 11
Q ss_pred -----ccCHHHHHhcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccceeccc
Q 018022 313 -----SLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 313 -----~~~~~~~~~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.+++..++.|++++.|++.+.+. ..+.++++++++++|+|++.++.+|
T Consensus 266 ~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~ 320 (348)
T PLN03154 266 SASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSE 320 (348)
T ss_pred CCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceeccc
Confidence 13566788899999998765432 1356889999999999999887765
No 74
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.6e-36 Score=286.67 Aligned_cols=303 Identities=29% Similarity=0.469 Sum_probs=258.6
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd 96 (362)
|||+++.+++. +++++.+.|++.++||+||+.++++|+.|...+.|..+. .+|.++|+|++|+|+++|+++++|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 78999999886 999999999999999999999999999999988887653 3788999999999999999999999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
+|+..+...|++|.+|..++.++|+.... +|...+| +|++|+.++.++++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCH
Confidence 99999999999999999999999977642 3333344 9999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
.+++++ ..+.++++++ +.++++++++|+|+|+|.+|.+++++|+..|+++|+++++++++.+.++++|++++++.++
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998876 5788899886 7889999999999988999999999999999955899999999999999999988888766
Q ss_pred CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 336 (362)
.++... +...+.++|++||++|....+...+++++++ |+++.+|.........++...+..+++++.+....
T Consensus 214 --~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 285 (334)
T cd08234 214 --EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN---- 285 (334)
T ss_pred --CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----
Confidence 445444 3333338999999999877789999999997 99999987543334556666666688999887532
Q ss_pred cccHHHHHHHHHcCCccc
Q 018022 337 KSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 337 ~~~l~~~l~~~~~g~l~~ 354 (362)
.+.+++++++++++++.+
T Consensus 286 ~~~~~~~~~~~~~~~l~~ 303 (334)
T cd08234 286 PYTFPRAIALLESGKIDV 303 (334)
T ss_pred HHHHHHHHHHHHcCCCCh
Confidence 467999999999999875
No 75
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.6e-36 Score=286.34 Aligned_cols=303 Identities=27% Similarity=0.406 Sum_probs=257.3
Q ss_pred eEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 018022 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (362)
Q Consensus 18 ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~ 97 (362)
||+++.+++..+++++.|.|.+.+++|+||+.++++|++|...+.+......+|.++|+|++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68999999766999999999999999999999999999999998887655567889999999999999999999999999
Q ss_pred EEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 98 VIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 98 V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
|++.+. .+|++|.+|.++..++|++..+ ++....| +|++|+.++.++++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCH
Confidence 988665 6799999999999999998665 3332334 8999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
.+++.+.+.+.+||+++.. .+++++++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999988899999998744 789999999999988899999999999999 8999999999999999999988887655
Q ss_pred CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc
Q 018022 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 336 (362)
.+.... ..+++|++||+++.......++++++++ |+++.+|... ......+...++.++.++.++..+.
T Consensus 216 --~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 284 (330)
T cd08245 216 --ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPE-SPPFSPDIFPLIMKRQSIAGSTHGG--- 284 (330)
T ss_pred --cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCC-CCccccchHHHHhCCCEEEEeccCC---
Confidence 333332 2237999999998877789999999997 9999998642 2233333556778899998886543
Q ss_pred cccHHHHHHHHHcCCcccce
Q 018022 337 KSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 337 ~~~l~~~l~~~~~g~l~~~~ 356 (362)
.+.+++++++++++.+.+.+
T Consensus 285 ~~~~~~~~~ll~~~~l~~~~ 304 (330)
T cd08245 285 RADLQEALDFAAEGKVKPMI 304 (330)
T ss_pred HHHHHHHHHHHHcCCCcceE
Confidence 47889999999999987643
No 76
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=4.7e-36 Score=284.50 Aligned_cols=297 Identities=25% Similarity=0.353 Sum_probs=253.2
Q ss_pred eeEEEeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022 17 CRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (362)
Q Consensus 17 ~ka~~~~~~~~----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~ 92 (362)
|||+++.+++. ++++++.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 78999998883 48888888888999999999999999999999988876655678899999999999999999999
Q ss_pred CCCCEEEeeCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022 93 VEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (362)
Q Consensus 93 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P 171 (362)
++||+|++.+. .+|++|..|+.++.++|+...+ .|...+| +|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECC
Confidence 99999987654 6799999999999999987765 4444445 99999999999999999
Q ss_pred CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (362)
Q Consensus 172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv 251 (362)
+++++.+++.+.+.+.+||+++ +.++++++++|+|+|+|++|++++++++..|+ +|+++++++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88999999999999999999999999999999 999999999999999999998888
Q ss_pred cCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
+.+. . ..+++|+++++.+....++.++++++++ |+++.+|... .....+++.. +.++..+.++..
T Consensus 217 ~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~-~~~~~~i~~~~~ 281 (329)
T cd08298 217 DSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYEL-LWGEKTIRSVAN 281 (329)
T ss_pred ccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhh-hhCceEEEEecC
Confidence 7654 1 1237999999988777799999999997 9999998632 2222344433 446777777653
Q ss_pred cCCCccccHHHHHHHHHcCCcccc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
. ..+.+++++++++++.+++.
T Consensus 282 ~---~~~~~~~~~~l~~~~~l~~~ 302 (329)
T cd08298 282 L---TRQDGEEFLKLAAEIPIKPE 302 (329)
T ss_pred C---CHHHHHHHHHHHHcCCCCce
Confidence 2 24778999999999998874
No 77
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.7e-36 Score=285.41 Aligned_cols=294 Identities=23% Similarity=0.319 Sum_probs=240.4
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC-----------CCCCCccccccceEEEEEe
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV 85 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~v 85 (362)
|||+++.++ .+++++++.|++.++||+|||.++++|+.|...+.|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 789999877 499999999999999999999999999999998877321 2235889999999999999
Q ss_pred CCCCCC-CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 018022 86 GENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (362)
Q Consensus 86 G~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~ 164 (362)
|+++++ |++||+|+..+...|+.|..|..+ + ....+ |+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~---------~----~~~~~-------------------g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIG---------L----SPEAP-------------------GGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCC---------C----CcCCC-------------------CceeeeEEech
Confidence 999987 999999999999999999999321 0 00112 39999999999
Q ss_pred CceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (362)
Q Consensus 165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (362)
+.++++|+++++++++ +...+++||++ ....+++++++|||+|+|.+|.+++|+|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 45588899997 578899999999999889999999999999999778889989999999999
Q ss_pred cCCcEEEcCCCCCCccHHH---HHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHH
Q 018022 245 FGVTEFVNSKNCGDKSVSQ---IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL 320 (362)
Q Consensus 245 ~g~~~vv~~~~~~~~~~~~---~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 320 (362)
+|+++++++++ .+..+ .+...+.+ ++|++||++|+...+..++++++++ |+++.+|...... .+.....+
T Consensus 205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~ 278 (341)
T cd08262 205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESD--NIEPALAI 278 (341)
T ss_pred cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCC--ccCHHHHh
Confidence 99999998765 32211 34444555 8999999999865588899999997 9999999753222 23333334
Q ss_pred hcCcEEEEeeccCCCccccHHHHHHHHHcCCcccc
Q 018022 321 HSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~ 355 (362)
.+++.+.++... ..++++++++++++|+|++.
T Consensus 279 ~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~ 310 (341)
T cd08262 279 RKELTLQFSLGY---TPEEFADALDALAEGKVDVA 310 (341)
T ss_pred hcceEEEEEecc---cHHHHHHHHHHHHcCCCChH
Confidence 578888765432 24689999999999999863
No 78
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5e-36 Score=286.04 Aligned_cols=304 Identities=25% Similarity=0.380 Sum_probs=251.6
Q ss_pred eeEEEeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~---~~~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++..+++.+++.+.+.|.|.++|++|||+++++|+.|+..+.+.. ....+|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888679999999999999999999999999999988764421 1234577899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..+..+|+.|..|..+..++|....+ .|....| +|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDTDG-------------------CFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccce---EeccCCC-------------------cceEEEEechHHcEECcCC
Confidence 99999999999999999999999999976432 3333334 9999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
++.+.+ ++...+.++++++. ....+|++|+|.|+|.+|++++++|+.+|..+|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998555 44457788887653 456789999999889999999999999998678888888999999999999999987
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH-HHHhcCcEEEEeec
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLF 331 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~-~~~~~~~~i~g~~~ 331 (362)
+. .++. .+.++.++ ++|++||++|....+..++++++++ |+++.+|.... ...+++. .+..+++.+.+...
T Consensus 216 ~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 288 (341)
T cd05281 216 RE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG--PVDIDLNNLVIFKGLTVQGITG 288 (341)
T ss_pred cc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC--CcccccchhhhccceEEEEEec
Confidence 76 5677 78887776 9999999999887789999999997 99999987533 2333332 36667888887652
Q ss_pred cCCCccccHHHHHHHHHcCCccc
Q 018022 332 GGLKAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 332 ~~~~~~~~l~~~l~~~~~g~l~~ 354 (362)
.. ..+.+.+++++++++.+++
T Consensus 289 ~~--~~~~~~~~~~~l~~~~l~~ 309 (341)
T cd05281 289 RK--MFETWYQVSALLKSGKVDL 309 (341)
T ss_pred CC--cchhHHHHHHHHHcCCCCh
Confidence 22 2467889999999999863
No 79
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.6e-36 Score=287.72 Aligned_cols=289 Identities=19% Similarity=0.186 Sum_probs=234.7
Q ss_pred ceeeEEEeccCCC-ceEEEEeec----CCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccc--eEEEEEeC
Q 018022 15 IQCRAAIATAPGE-PLVIDEVIV----DPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEA--IGVVESVG 86 (362)
Q Consensus 15 ~~~ka~~~~~~~~-~l~l~~~~~----p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~--~G~Vv~vG 86 (362)
..+|++....+.. .|++.+.++ |+|+++||||||++++||+.|...+.|.... ..+|.++|++. .|.+..+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~ 85 (338)
T cd08295 6 VILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD 85 (338)
T ss_pred EEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence 4567777655553 399998887 8899999999999999999999988875432 35688899754 45666688
Q ss_pred CCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-C
Q 018022 87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-A 165 (362)
Q Consensus 87 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~-~ 165 (362)
+++++|++||+|+.. |+|+||+++|. .
T Consensus 86 ~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~ 113 (338)
T cd08295 86 SGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQ 113 (338)
T ss_pred cCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchh
Confidence 888899999999621 28999999999 7
Q ss_pred ceEEcC-CCCCcc-chhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022 166 HVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (362)
Q Consensus 166 ~~~~~P-~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (362)
.++++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++
T Consensus 114 ~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~ 192 (338)
T cd08295 114 DLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLL 192 (338)
T ss_pred ceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999995 678886 788889899999999878889999999999998 9999999999999999 899999999999999
Q ss_pred Hh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc----cccCHH
Q 018022 243 KR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ----LSLSSF 317 (362)
Q Consensus 243 ~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~----~~~~~~ 317 (362)
++ +|+++++++.+ +.++.+.+++.+++++|++||++|+. .+..++++++++ |+++.+|....... ...++.
T Consensus 193 ~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~ 268 (338)
T cd08295 193 KNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLL 268 (338)
T ss_pred HHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHH
Confidence 98 99999998754 14678888877655899999999985 489999999997 99999997432211 113456
Q ss_pred HHHhcCcEEEEeeccCCCc--cccHHHHHHHHHcCCcccceeccc
Q 018022 318 EVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.++.+++++.+++.+.+.. .+.++++++++++|++++.+..+|
T Consensus 269 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~ 313 (338)
T cd08295 269 NIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIAD 313 (338)
T ss_pred HHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeeccc
Confidence 6777889999876554321 245788999999999998766554
No 80
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=5.9e-36 Score=285.07 Aligned_cols=299 Identities=27% Similarity=0.404 Sum_probs=244.8
Q ss_pred EeccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhh-cCCC--CCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 018022 21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (362)
Q Consensus 21 ~~~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~ 97 (362)
++++.+. +++++.+.|.++++||+|||.++++|++|...+. +... ...+|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 5677766 9999999999999999999999999999988763 3221 1245789999999999999999999999999
Q ss_pred EEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 018022 98 VIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (362)
Q Consensus 98 V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~ 176 (362)
|+..+..+|+.|.+|..+..+.|.++.+ ++.. .+ .+..|+|++|+.++.+.++++|++++.
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~---------------~~~~g~~~~~v~v~~~~~~~iP~~~~~ 142 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF---------------PHVQGGFREYLVVDASQCVPLPDGLSL 142 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc---------------CCCCCceeeEEEechHHeEECcCCCCH
Confidence 9999999999999999999999998644 2210 00 011249999999999999999999999
Q ss_pred cchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC
Q 018022 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 256 (362)
++++. ..++.++|+++.....+ ++++|||.|+|.+|++++++|+.+|+.+++++++++++.++++++|.++++++++
T Consensus 143 ~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~- 219 (339)
T cd08232 143 RRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR- 219 (339)
T ss_pred HHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc-
Confidence 99876 45888999987555555 9999999988999999999999999877999999899999999999999998765
Q ss_pred CCccHHHHHHhhc-CC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC
Q 018022 257 GDKSVSQIIIDMT-DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (362)
Q Consensus 257 ~~~~~~~~i~~~~-~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (362)
.++ .++. .. ++|++||++|+...++.++++|+++ |+++.+|... ....+++..++.+++++.+...
T Consensus 220 --~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~--- 287 (339)
T cd08232 220 --DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR--- 287 (339)
T ss_pred --hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec---
Confidence 332 2222 22 6999999999876689999999997 9999998643 3345566666778888888752
Q ss_pred CccccHHHHHHHHHcCCccc
Q 018022 335 KAKSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 335 ~~~~~l~~~l~~~~~g~l~~ 354 (362)
..+++++++++++++.+++
T Consensus 288 -~~~~~~~~~~~~~~~~i~~ 306 (339)
T cd08232 288 -FDDEFAEAVRLLAAGRIDV 306 (339)
T ss_pred -CHHHHHHHHHHHHcCCCCc
Confidence 2467999999999999864
No 81
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-35 Score=284.40 Aligned_cols=300 Identities=24% Similarity=0.274 Sum_probs=243.4
Q ss_pred eeEEEeccCCCc--eEEEE-eecCCCCCCeEEEEEeeeecchhhhhhhhcCCC--------------------CCCCCcc
Q 018022 17 CRAAIATAPGEP--LVIDE-VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------------------PAVFPRI 73 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~-~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~--------------------~~~~p~~ 73 (362)
|||+++..++.+ +.+.+ ++.|.+.+++|+|||.++++|++|+.++.|..+ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 689999877643 55543 577788999999999999999999998876542 2356899
Q ss_pred ccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccc
Q 018022 74 LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSV 153 (362)
Q Consensus 74 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~ 153 (362)
+|||++|+|+++|+++++|++||+|+..+...|+.|..|. .| .+ .|...+|
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~---~~---~~~~~~g------------------ 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DI---DY---IGSERDG------------------ 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----cc---cc---cCCCCCc------------------
Confidence 9999999999999999999999999998888888776532 11 11 2222233
Q ss_pred cceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE
Q 018022 154 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (362)
Q Consensus 154 g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~ 232 (362)
+|++|+.++...++++|+++++.+++.+.+.+.+||+++ ...+++++++|||+|+ |.+|++++++|+.+|+ +++++
T Consensus 132 -~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 132 -GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred -cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 999999999999999999999999999999999999976 7788999999999998 9999999999999999 78888
Q ss_pred cCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc
Q 018022 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311 (362)
Q Consensus 233 ~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~ 311 (362)
++++ +++.++++|++.+++... ..+.+ ...+.+ ++|++||++|+.. ++.++++++++ |+++.+|.. ....
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~-~~~~ 279 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAI-AGPV 279 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEeccc-CCcc
Confidence 7655 888889999976666544 34434 445555 8999999999864 89999999997 999999864 2223
Q ss_pred cccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022 312 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 312 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
..+++..++.+++++.++.... .+.++++++++++++|++.+..+|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~ 325 (350)
T cd08274 280 VELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRPVVAKTF 325 (350)
T ss_pred ccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccccccccc
Confidence 5677777788899999987542 578999999999999987655544
No 82
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2e-35 Score=281.85 Aligned_cols=298 Identities=26% Similarity=0.410 Sum_probs=249.2
Q ss_pred ccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC---CCCCCCccccccceEEEEEeCCCCCCCCCCCEEE
Q 018022 23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99 (362)
Q Consensus 23 ~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~---~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 99 (362)
.++++.+++++.|.|.|.++||+||+.++++|++|..++.+.. ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 4677779999999999999999999999999999998765542 1234577899999999999999999999999999
Q ss_pred eeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccch
Q 018022 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA 179 (362)
Q Consensus 100 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~a 179 (362)
..+...|+.|..|..+..++|...++ .|....| +|++|+.++.+.++++|++++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------CFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---EeecCCC-------------------cceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999998755 2322334 9999999999999999999998655
Q ss_pred hccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCc
Q 018022 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK 259 (362)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~ 259 (362)
+ +...+.+|++++ .....+|++|+|.|+|.+|.+++++|+.+|.+.|+++++++++.++++++|++++++..+ .
T Consensus 143 ~-~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~ 216 (340)
T TIGR00692 143 T-IQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E 216 (340)
T ss_pred h-hcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence 4 556888888865 345789999999888999999999999999955889988889999999999998998876 6
Q ss_pred cHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH-HHHhcCcEEEEeeccCCCcc
Q 018022 260 SVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGLKAK 337 (362)
Q Consensus 260 ~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~ 337 (362)
++.+.+.+++++ ++|++|||+|+...+...+++++++ |+++.+|.... ..++++. .++.+++++.+... ....
T Consensus 217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~ 291 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG--KVTIDFTNKVIFKGLTIYGITG--RHMF 291 (340)
T ss_pred CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC--CcccchhhhhhhcceEEEEEec--CCch
Confidence 788888888776 8999999999877789999999997 99999997532 2333343 56778888887652 1224
Q ss_pred ccHHHHHHHHHcCCcc
Q 018022 338 SDIPILLKRYMDKWSY 353 (362)
Q Consensus 338 ~~l~~~l~~~~~g~l~ 353 (362)
+.+.++++++++++++
T Consensus 292 ~~~~~~~~~l~~~~l~ 307 (340)
T TIGR00692 292 ETWYTVSRLIQSGKLD 307 (340)
T ss_pred hhHHHHHHHHHcCCCC
Confidence 6688999999999987
No 83
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.9e-35 Score=280.30 Aligned_cols=269 Identities=19% Similarity=0.188 Sum_probs=221.1
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCC
Q 018022 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTE 108 (362)
Q Consensus 29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~ 108 (362)
|++++++.|+|++|||||||.+++||+.++. |.+.....|.++|.|++|+|+++|+ +|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8899999999999999999999999997653 4333334578999999999999874 59999999732
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc----CCCCCccch-hccc
Q 018022 109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLS 183 (362)
Q Consensus 109 c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~----P~~l~~~~a-a~~~ 183 (362)
++|++|+.++.+.+.++ |++++++++ ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 26899999999888877 899999987 6788
Q ss_pred cchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHH
Q 018022 184 CGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS 262 (362)
Q Consensus 184 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~ 262 (362)
+++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++++ ..++.
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~ 197 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLE 197 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHH
Confidence 899999999888899999999999996 9999999999999999 8999999999999999999999999875 12566
Q ss_pred HHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---Cccc--cCHHHHHhcCcEEEEeeccCCC--
Q 018022 263 QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---SQLS--LSSFEVLHSGKILMGSLFGGLK-- 335 (362)
Q Consensus 263 ~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---~~~~--~~~~~~~~~~~~i~g~~~~~~~-- 335 (362)
+.++...++++|++||++|+.. +..++++++++ |+++.+|..... ...+ .....++.+++++.++....+.
T Consensus 198 ~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 275 (325)
T TIGR02825 198 ETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGE 275 (325)
T ss_pred HHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhh
Confidence 6666665458999999999876 79999999997 999999964321 1112 2344567788999887654332
Q ss_pred -ccccHHHHHHHHHcCCcccceeccc
Q 018022 336 -AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 336 -~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
..+.++++++++++|++++.+..+|
T Consensus 276 ~~~~~~~~~~~l~~~g~l~~~~~~~~ 301 (325)
T TIGR02825 276 VRQKALKELLKWVLEGKIQYKEYVIE 301 (325)
T ss_pred hhHHHHHHHHHHHHCCCcccceeccc
Confidence 1357899999999999998876655
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.1e-35 Score=279.80 Aligned_cols=281 Identities=19% Similarity=0.171 Sum_probs=228.6
Q ss_pred eeeEEEeccC--CCc----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCC
Q 018022 16 QCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (362)
Q Consensus 16 ~~ka~~~~~~--~~~----l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v 89 (362)
+|||+++.+. +.+ +++++++.|+|+++||+|||.+++||+.|..... ...++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---~~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---RLNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---cCCCCCcEecceEEEEEec---CC
Confidence 5899999983 332 8899999999999999999999999988754221 1124689999999999996 44
Q ss_pred CCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC---c
Q 018022 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA---H 166 (362)
Q Consensus 90 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~---~ 166 (362)
++|++||+|+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999732 278999999999 9
Q ss_pred eEEcCCCCC--c---cchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 018022 167 VVKVDPTVP--P---NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (362)
Q Consensus 167 ~~~~P~~l~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~ 240 (362)
++++|++++ + ..++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999988 2 2234567799999999888899999999999986 9999999999999999 8999999999999
Q ss_pred HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCC---c--cccC
Q 018022 241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS---Q--LSLS 315 (362)
Q Consensus 241 ~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~---~--~~~~ 315 (362)
+++++|+++++++++ +++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|...... . ....
T Consensus 183 ~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~ 257 (329)
T cd08294 183 WLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYV 257 (329)
T ss_pred HHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCccc
Confidence 999999999999887 78888888877668999999999854 89999999997 9999998532111 1 1233
Q ss_pred HHHHHhcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccceeccc
Q 018022 316 SFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 316 ~~~~~~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
...++.+++++.+++...+. ..+.++++++++++|+|++.+..+|
T Consensus 258 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~ 304 (329)
T cd08294 258 QETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTE 304 (329)
T ss_pred HHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence 45677789999987654431 1345788999999999998765544
No 85
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.2e-35 Score=280.72 Aligned_cols=275 Identities=19% Similarity=0.174 Sum_probs=214.7
Q ss_pred eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhh---cCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCC
Q 018022 29 LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA 104 (362)
Q Consensus 29 l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~---g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 104 (362)
+++++++.|+|. ++||||||.++|||+.|..... +.....++|.++|||++|+|+++|+++++|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 889999999875 9999999999999999864332 1111235688999999999999999999999999997310
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc----hh
Q 018022 105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----AC 180 (362)
Q Consensus 105 ~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~----aa 180 (362)
++|+||++++.+.++++|++++..+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 2799999999999999999864432 34
Q ss_pred ccccchhhhHHHHHHhcCCCCC--CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCC
Q 018022 181 LLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNC 256 (362)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~~~g--~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~ 256 (362)
.+.+++.|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|+++++++++
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 5666899999988778888877 99999998 9999999999999998679999999999999876 99999999887
Q ss_pred CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC-Ccc----ccC--HHHH-HhcCcEEEE
Q 018022 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG-SQL----SLS--SFEV-LHSGKILMG 328 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~-~~~----~~~--~~~~-~~~~~~i~g 328 (362)
.++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... .+. .++ ...+ ..+++.+.+
T Consensus 211 --~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (345)
T cd08293 211 --DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRER 286 (345)
T ss_pred --CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEE
Confidence 77888888887668999999999876 78999999997 999999853211 111 111 1122 234555444
Q ss_pred eeccCCC--ccccHHHHHHHHHcCCcccceecc
Q 018022 329 SLFGGLK--AKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 329 ~~~~~~~--~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
.....+. ..+.++++++++++|+|++.+..+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~ 319 (345)
T cd08293 287 FLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVY 319 (345)
T ss_pred EEeeccHhHHHHHHHHHHHHHHCCCccceeEEe
Confidence 3222211 134577888999999999875544
No 86
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=4.6e-35 Score=278.38 Aligned_cols=286 Identities=17% Similarity=0.146 Sum_probs=234.4
Q ss_pred eEEEeccC---CCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCC
Q 018022 18 RAAIATAP---GEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (362)
Q Consensus 18 ka~~~~~~---~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~ 92 (362)
||+++.++ +.+ +++.++|.|+|+++||+|||+++++|++|..++.+..+...+|.++|+|++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57788876 433 8888999999999999999999999999998887765555678899999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
++||+|+.... ... .|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~---------------------------~~~-------------------~g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD---------------------------IDR-------------------PGSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC---------------------------CCC-------------------CCcccceEEEcHHHcccCCC
Confidence 99999974310 011 24899999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCC-----CCEEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhc
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRF 245 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~ 245 (362)
++++++++.+++++.|||+++....++++ |++|||+|+ |.+|++++|+|+.+ |+ +|+++++++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999878888877 999999987 99999999999998 99 899999999999999999
Q ss_pred CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (362)
Q Consensus 246 g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 325 (362)
|+++++++.. ++.+.+.+..++++|+++|++++...+...+++++++ |+++.++.. ..+++..+..+++.
T Consensus 194 g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~ 263 (336)
T TIGR02817 194 GAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSIS 263 (336)
T ss_pred CCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceE
Confidence 9999998643 5777777754348999999987766689999999997 999988532 23444455556677
Q ss_pred EEEeeccC--CCc-------cccHHHHHHHHHcCCcccceeccc
Q 018022 326 LMGSLFGG--LKA-------KSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 326 i~g~~~~~--~~~-------~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
+.+..+.. ... .+.+++++++++++.+++.+.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ 307 (336)
T TIGR02817 264 LHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETF 307 (336)
T ss_pred EEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhcc
Confidence 77654331 111 145788999999999987665544
No 87
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=9.2e-35 Score=276.98 Aligned_cols=289 Identities=21% Similarity=0.266 Sum_probs=242.4
Q ss_pred eeEEEeccCCCc---eEEEEeecCCCCC-CeEEEEEeeeecchhhhhhhhcCCCCC-C----CCccccccceEEEEEeCC
Q 018022 17 CRAAIATAPGEP---LVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKMKDFPA-V----FPRILGHEAIGVVESVGE 87 (362)
Q Consensus 17 ~ka~~~~~~~~~---l~l~~~~~p~~~~-~eVlVkv~~~~i~~~d~~~~~g~~~~~-~----~p~~~G~e~~G~Vv~vG~ 87 (362)
|||+++.+++.+ +.++++|.|.|.+ +||+||+.++++|++|...+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999999875 8999999999888 999999999999999999888865431 2 678999999999999999
Q ss_pred CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 018022 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (362)
Q Consensus 88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~ 167 (362)
++..|++||+|+.... . .|+|++|+.++...+
T Consensus 81 ~v~~~~~Gd~V~~~~~-----------------------------~-------------------~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP-----------------------------G-------------------LGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC-----------------------------C-------------------CccchheEeccHHHe
Confidence 9999999999985321 0 148999999999999
Q ss_pred EEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc----hHHHHH
Q 018022 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIG 242 (362)
Q Consensus 168 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~----~~~~~~ 242 (362)
+++|+++++++++.+++.+.+||+++.....++++++|||+|+ |++|++++++|+..|+ +++++.+++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999998877788999999999987 9999999999999999 777777665 678888
Q ss_pred HhcCCcEEEcCCCCCCc---cHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHH
Q 018022 243 KRFGVTEFVNSKNCGDK---SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV 319 (362)
Q Consensus 243 ~~~g~~~vv~~~~~~~~---~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~ 319 (362)
+++|++++++++. . ++.+.+..+.++++|.+|||+|+.. +...+++++++ |+++.+|.... ....+++..+
T Consensus 192 ~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~ 265 (341)
T cd08290 192 KALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLL 265 (341)
T ss_pred HhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHH
Confidence 8999999998765 4 6777777766557999999999876 77889999997 99999986432 2445676667
Q ss_pred HhcCcEEEEeeccCCC---c----cccHHHHHHHHHcCCcccceeccc
Q 018022 320 LHSGKILMGSLFGGLK---A----KSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 320 ~~~~~~i~g~~~~~~~---~----~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
+.++.++.+..+..+. . .+.+++++++++++++++....++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 313 (341)
T cd08290 266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKV 313 (341)
T ss_pred hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCccccc
Confidence 7889999998765432 1 135888999999999987655443
No 88
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.4e-34 Score=268.96 Aligned_cols=305 Identities=23% Similarity=0.297 Sum_probs=252.3
Q ss_pred eeEEEeccCC--CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~--~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++...+ +.+++++.+.|.++++|++||+.++++|++|+....|..+. ...|.++|||++|+|+++|+.+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899999664 33888888888899999999999999999999988776543 34688999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|++.....|+.| .++.|.... +.|...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~------~~~~~~~~~---~~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDG------PPTAEDEAS---ALGGPID-------------------GVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccc------ccccccccc---ccccccC-------------------ceeeeEEEecHHHeEECCCC
Confidence 9999998876665443 334443221 1232223 48999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+++.+++.+.+.+.+||+++.....+++|++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.++++|.+.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999988777899999999999889999999999999999 89999999999999999999998886
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
+. +.++.+.+.+.+++ ++|.+||+++... +..++++++++ |+++.+|..... ....+...++.+++++.++..+
T Consensus 212 ~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 286 (336)
T cd08276 212 RT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVG 286 (336)
T ss_pred Cc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecC
Confidence 54 24677888888876 9999999998654 88999999997 999999975332 2345666778899999998765
Q ss_pred CCCccccHHHHHHHHHcCCcccceec
Q 018022 333 GLKAKSDIPILLKRYMDKWSYVPFSG 358 (362)
Q Consensus 333 ~~~~~~~l~~~l~~~~~g~l~~~~~~ 358 (362)
. .+.+++++++++++.+.+.+..
T Consensus 287 ~---~~~~~~~~~l~~~~~l~~~~~~ 309 (336)
T cd08276 287 S---RAQFEAMNRAIEAHRIRPVIDR 309 (336)
T ss_pred c---HHHHHHHHHHHHcCCcccccCc
Confidence 4 4789999999999888765433
No 89
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=9.4e-34 Score=267.61 Aligned_cols=289 Identities=20% Similarity=0.217 Sum_probs=241.9
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG 91 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~ 91 (362)
|||+++++++.+ +.+.+.+.|.+.++||+||+.++++|++|+..+.|..+. ..+|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876643 667777777789999999999999999999888776432 356789999999999999999999
Q ss_pred CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (362)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P 171 (362)
+++||+|+.... ..+ |+|++|+.++.++++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~~~-------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------RAG-------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------CCC-------------------ceeeEEEEEchHHeEeCC
Confidence 999999985421 012 389999999999999999
Q ss_pred CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (362)
Q Consensus 172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v 250 (362)
+++++++++.+++.+.+|| ++....+++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999998999995 4678889999999999996 9999999999999999 89999999999999999999888
Q ss_pred EcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (362)
Q Consensus 251 v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (362)
++..+ .++.+.+.+++++ ++|+++|++|+.. ...++++++++ |+++.+|.... ....+++..++.+++++.++
T Consensus 192 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08244 192 VDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASG-EWTALDEDDARRRGVTVVGL 265 (324)
T ss_pred EecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCC-CCCccCHHHHhhCCcEEEEe
Confidence 88876 6788888888777 8999999999876 68899999997 99999997533 22366666677889999988
Q ss_pred eccCCCc---cccHHHHHHHHHcCCcccceeccc
Q 018022 330 LFGGLKA---KSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 330 ~~~~~~~---~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
....... .+.+++++++++++++.+.+..+|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 299 (324)
T cd08244 266 LGVQAERGGLRALEARALAEAAAGRLVPVVGQTF 299 (324)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCccCccceEE
Confidence 7644321 356888899999999876554443
No 90
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.3e-34 Score=268.97 Aligned_cols=288 Identities=22% Similarity=0.247 Sum_probs=239.9
Q ss_pred eeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 018022 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (362)
Q Consensus 16 ~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~ 92 (362)
+|||+++..+++. +++++.+.|.+.++||+|||.++++|+.|...+.+..+. ...|.++|+|++|+|+++|++++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 5999999988753 777788888899999999999999999999888776532 3456789999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
++||+|+... ..|+|++|++++.++++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------------------------PGGGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------------------------CCCceeeEEEecHHHcEeCCC
Confidence 9999997431 113899999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv 251 (362)
+++..+++.+.+++.+||+++.....++++++|+|+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|+++++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999998899999998877789999999999997 9999999999999999 767788889999999999999898
Q ss_pred cCCCCCCcc-HHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccc-cCHHHHHhcCcEEEE
Q 018022 252 NSKNCGDKS-VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMG 328 (362)
Q Consensus 252 ~~~~~~~~~-~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~-~~~~~~~~~~~~i~g 328 (362)
++.. .+ +.+.+.+.+++ ++|++||++|+.. +..++++++++ |+++.+|...+ ..+. +++..++.+++++.+
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (334)
T PTZ00354 191 RYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIF 264 (334)
T ss_pred ecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEe
Confidence 8765 44 77888888776 9999999998754 88999999997 99999986433 2333 777777778889998
Q ss_pred eeccCCCc-------cccHHHHHHHHHcCCcccceecc
Q 018022 329 SLFGGLKA-------KSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 329 ~~~~~~~~-------~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
+....... .+.+++++++++++.+++.+..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 302 (334)
T PTZ00354 265 STLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRT 302 (334)
T ss_pred eeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccE
Confidence 86554221 12357788999999988654443
No 91
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=7.4e-34 Score=269.23 Aligned_cols=285 Identities=19% Similarity=0.222 Sum_probs=233.0
Q ss_pred eeeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 018022 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 16 ~~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
+||++++.+++.+ +++++++.|.|.++||+||+.++++|++|+....+..+...+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 4999999988764 88999999999999999999999999999998887765555688999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+... .. .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-----------------------------~~-------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQ-----------------------------SA-------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECC-----------------------------CC-------------------CcceeeEEEcCHHHceeCCCC
Confidence 999997321 01 138999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
+++++++.+.+.+.+||.++.....+++|++|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999888889999998877788999999999976 9999999999999999 8999999999999999999999998
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEE-E-Ee
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL-M-GS 329 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i-~-g~ 329 (362)
.++ .++.+.+++++++ ++|++|||+|+.. +...+++++++ |+++.+|.... ....+++..+..++..+ . ..
T Consensus 192 ~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 265 (327)
T PRK10754 192 YRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTRPS 265 (327)
T ss_pred CCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEecce
Confidence 876 7788889988887 9999999999854 88899999997 99999997532 22234444443333221 1 11
Q ss_pred eccCCCcc----ccHHHHHHHHHcCCcccc
Q 018022 330 LFGGLKAK----SDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 330 ~~~~~~~~----~~l~~~l~~~~~g~l~~~ 355 (362)
....+..+ +.++++++++++|+|++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~ 295 (327)
T PRK10754 266 LQGYITTREELTEASNELFSLIASGVIKVD 295 (327)
T ss_pred eecccCCHHHHHHHHHHHHHHHHCCCeeee
Confidence 11111112 235668999999999864
No 92
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.4e-33 Score=257.26 Aligned_cols=269 Identities=31% Similarity=0.459 Sum_probs=228.1
Q ss_pred eEEEEEeeeecchhhhhhhhcCCC-CCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCC
Q 018022 43 EVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (362)
Q Consensus 43 eVlVkv~~~~i~~~d~~~~~g~~~-~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~ 121 (362)
||+|||.++++|++|...+.+..+ ...+|.++|+|++|+|+++|++++.|++||+|+..+...|+.|..|.. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999988765 345688999999999999999999999999999999999999999997 676
Q ss_pred CCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCC
Q 018022 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (362)
Q Consensus 122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~ 201 (362)
.... .+....| +|++|+.++.+.++++|+++++++++.+++.+.+||+++.....+.+
T Consensus 77 ~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LGEGLDG-------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---eccccCC-------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 6654 3333344 99999999999999999999999999998899999998877777799
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV 280 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~ 280 (362)
+++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|.+++++..+ .++.+.+. ...+ ++|++|+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~ 209 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAV 209 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECC
Confidence 9999999985599999999999998 9999999999999999999988888776 56666666 4444 899999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHH
Q 018022 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRY 347 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~ 347 (362)
+....++.++++++++ |+++.+|....... ......++.+++++.++..+. .++++++++++
T Consensus 210 ~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 271 (271)
T cd05188 210 GGPETLAQALRLLRPG-GRIVVVGGTSGGPP-LDDLRRLLFKELTIIGSTGGT---REDFEEALDLL 271 (271)
T ss_pred CCHHHHHHHHHhcccC-CEEEEEccCCCCCC-cccHHHHHhcceEEEEeecCC---HHHHHHHHhhC
Confidence 9855588999999997 99999997543322 223456778899999997665 36778777753
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=6.1e-33 Score=262.16 Aligned_cols=289 Identities=17% Similarity=0.154 Sum_probs=226.0
Q ss_pred eeEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++.++++ +++++++|.|.++++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999985 5999999999999999999999999999999998887543 346889999999999999 456899
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..+. ..|+..+| +|++|+.++.++++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~~~g-------------------~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMNTDG-------------------GFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCCCCc-------------------eeEEEEEEchhhEEECCCC
Confidence 9999986421 02222233 9999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhc--CCC-CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTA--NVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~--~~~-~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
+++++++.+++.+.+||.++.... ++. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++++.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999999875443 335 3579999998 9999999999999999 7999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (362)
Q Consensus 250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (362)
++++++ . ..+..+....+++|++||++|+.. +..++++++++ |+++.+|..... +..+++..++.+++++.+.
T Consensus 195 ~~~~~~---~-~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd05280 195 VLDRED---L-LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGI 267 (325)
T ss_pred EEcchh---H-HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEE
Confidence 988654 2 122223333338999999999864 89999999997 999999975322 2355555566789999987
Q ss_pred eccCCCc---cccHHHHHHHHHcCCcccceecc
Q 018022 330 LFGGLKA---KSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 330 ~~~~~~~---~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
....... .+.++.+.+++..+.+. .+..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 299 (325)
T cd05280 268 DSVNCPMELRKQVWQKLATEWKPDLLE-IVVRE 299 (325)
T ss_pred EeecCchhHHHHHHHHHHHHHhcCCcc-ceeeE
Confidence 6544311 13345555556666333 34433
No 94
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=7.3e-33 Score=261.45 Aligned_cols=276 Identities=21% Similarity=0.267 Sum_probs=236.1
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCC
Q 018022 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCT 107 (362)
Q Consensus 29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~ 107 (362)
+++++.+.|.+.++||+|||.++++|+.|...+.+.... ..+|.++|+|++|+|+++|++++++++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999888776543 356789999999999999999999999999985421
Q ss_pred CCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchh
Q 018022 108 ECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187 (362)
Q Consensus 108 ~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ 187 (362)
.|+|++|+.++.+.++++|++++..+++.+++.+.
T Consensus 90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 13899999999999999999999999999888999
Q ss_pred hhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHH
Q 018022 188 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 266 (362)
Q Consensus 188 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~ 266 (362)
+||+++.....+.++++|+|+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|+++++++++ .++.+.+.
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~ 200 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVK 200 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHH
Confidence 99998878888899999999988 9999999999999999 8889988999999999999999999876 67888888
Q ss_pred hhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCc-------cc
Q 018022 267 DMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KS 338 (362)
Q Consensus 267 ~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~ 338 (362)
+.+++ ++|++|||+|+.. ....+++++++ |+++.+|..... ...+++..+..+++++.+..+..+.. .+
T Consensus 201 ~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (323)
T cd05282 201 EATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQE 277 (323)
T ss_pred HHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHH
Confidence 88877 9999999999876 67889999997 999999875433 45667666666899999988765431 24
Q ss_pred cHHHHHHHHHcCCcccceeccc
Q 018022 339 DIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 339 ~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.+++++++++++++.+.+..+|
T Consensus 278 ~~~~~~~~l~~~~l~~~~~~~~ 299 (323)
T cd05282 278 TFAEVIKLVEAGVLTTPVGAKF 299 (323)
T ss_pred HHHHHHHHHhCCCcccCcccee
Confidence 5888999999999987654443
No 95
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9.3e-33 Score=259.46 Aligned_cols=273 Identities=23% Similarity=0.333 Sum_probs=228.1
Q ss_pred ccCCCceEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-hcCCCC--CCCCccccccceEEEEEeCCCCCCCCCCCEEE
Q 018022 23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99 (362)
Q Consensus 23 ~~~~~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~-~g~~~~--~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 99 (362)
++++. +++++++.|++.++||+||+.++++|++|...+ .+.... +.+|.++|+|++|+|+++|++++++++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34555 999999999999999999999999999999887 665422 23478999999999999999999999999998
Q ss_pred eeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccch
Q 018022 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA 179 (362)
Q Consensus 100 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~a 179 (362)
..+ .|+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence 542 2489999999999999999998 233
Q ss_pred hccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCc
Q 018022 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK 259 (362)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~ 259 (362)
+....+++++|+++. ..+++++++|+|+|+|.+|.+++++|+.+|++.++++++.+++.++++++|++++++.+. .
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~ 184 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E 184 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---c
Confidence 333257788888764 888999999999988999999999999999944999999999999999999999988766 6
Q ss_pred cHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCC-Ccc
Q 018022 260 SVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL-KAK 337 (362)
Q Consensus 260 ~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-~~~ 337 (362)
++.+.+.+++++ ++|++|||+|....+...+++++++ |+++.+|... ....++++..+..+++.+.++..... ...
T Consensus 185 ~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (312)
T cd08269 185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGL 262 (312)
T ss_pred CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchh
Confidence 788888888877 9999999999887789999999997 9999999753 33456666677788999887754332 124
Q ss_pred ccHHHHHHHHHcCCccc
Q 018022 338 SDIPILLKRYMDKWSYV 354 (362)
Q Consensus 338 ~~l~~~l~~~~~g~l~~ 354 (362)
+.+++++++++++++++
T Consensus 263 ~~~~~~~~~~~~~~l~~ 279 (312)
T cd08269 263 EGMREAVKLIADGRLDL 279 (312)
T ss_pred hHHHHHHHHHHcCCCCc
Confidence 68999999999999986
No 96
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.2e-32 Score=260.91 Aligned_cols=282 Identities=23% Similarity=0.257 Sum_probs=234.8
Q ss_pred eeeEEEeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCC
Q 018022 16 QCRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (362)
Q Consensus 16 ~~ka~~~~~~~~----~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~ 90 (362)
+|||+++.+++. ++++++++.|.+.++||+|||.++++|++|+..+.|..+. ..+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 499999998776 3899999999999999999999999999999988876543 46788999999999999999999
Q ss_pred CCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (362)
Q Consensus 91 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~ 170 (362)
++++||+|+... .|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999997431 248999999999999999
Q ss_pred CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 171 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
|++ ..+++.+.+++.+||+++.+..++.++++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 34667788899999999877789999999999997 9999999999999999 8999999999999999999988
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---------CccccCHHHHH
Q 018022 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---------SQLSLSSFEVL 320 (362)
Q Consensus 250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---------~~~~~~~~~~~ 320 (362)
+++.++ .++.+.+....++++|++||++|+. .+..++++++++ |+++.+|..... ....++ ...+
T Consensus 188 v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 261 (329)
T cd08250 188 PINYKT---EDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLP-PKLL 261 (329)
T ss_pred EEeCCC---ccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhccC-CeEEEEecccCCcccCccccccccccc-HHHh
Confidence 888766 5677777666545899999999974 488999999997 999999875321 111223 2446
Q ss_pred hcCcEEEEeeccCCC--ccccHHHHHHHHHcCCcccce
Q 018022 321 HSGKILMGSLFGGLK--AKSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 321 ~~~~~i~g~~~~~~~--~~~~l~~~l~~~~~g~l~~~~ 356 (362)
.+++++.++.+.... ..+.+.+++++++++.+++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 299 (329)
T cd08250 262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEV 299 (329)
T ss_pred hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeE
Confidence 678999988654321 245688899999999988743
No 97
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=4.8e-33 Score=265.39 Aligned_cols=287 Identities=23% Similarity=0.254 Sum_probs=229.1
Q ss_pred eeEEEeccCC-CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~-~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
|||+++++++ ..+++++++.|+|+++||+||+.++++|++|+..+.+.. ....|.++|+|++|+|+.+|++++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 7899999994 239999999999999999999999999999988775543 22357889999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|+......|+ + ....|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence 999876543221 0 11124999999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCC----------CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~----------~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (362)
+++++.+++.+.+||+++.+..++ .++++|+|+|+ |.+|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987666544 78999999998 9999999999999999 788877 5689999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhcc--CCceEEEEccCCCCCccccCHHHHHhc
Q 018022 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK--GWGKTIVLGVDQPGSQLSLSSFEVLHS 322 (362)
Q Consensus 245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~--~~G~iv~~G~~~~~~~~~~~~~~~~~~ 322 (362)
+|+++++++++ .++.+.+++++++++|++||++|++..+..+++++++ + |+++.+|...... .+ ..
T Consensus 197 ~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~------~~ 264 (339)
T cd08249 197 LGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP------RK 264 (339)
T ss_pred cCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC------CC
Confidence 99999999876 6788888887766899999999985669999999999 8 9999998753211 11 11
Q ss_pred CcEEEEeeccCC---------CccccHHHHHHHHHcCCcccceecc
Q 018022 323 GKILMGSLFGGL---------KAKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 323 ~~~i~g~~~~~~---------~~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
+..+........ .....++.++++++++++.+....+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 310 (339)
T cd08249 265 GVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRV 310 (339)
T ss_pred CceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCcee
Confidence 223222221111 1124577889999999998764443
No 98
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.1e-32 Score=257.47 Aligned_cols=289 Identities=24% Similarity=0.318 Sum_probs=233.6
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
||++++...+.. +++.+.+.|.+.++||+||+.++++|++|+..+.+..+....|.++|+|++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 689999877642 77778888888999999999999999999998888765456688999999999999995 57999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+.... +++...+ |+|++|+.++...++++|+++
T Consensus 79 Gd~V~~~~~------------------------~~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMG------------------------GMGRTFD-------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecC------------------------CCCCCCC-------------------cccceEEEcCHHHcEeCCCCC
Confidence 999986521 0111122 399999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
++++++.+++++.+||+++....++++|++|+|+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999878788999999999998 9999999999999999 89999999999999999999888754
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc-ccCHHHHH--hcCcEEEEee
Q 018022 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVL--HSGKILMGSL 330 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~-~~~~~~~~--~~~~~i~g~~ 330 (362)
. .++.+.+.++ +.++|++||++|+. .+...+++++++ |+++.+|...+.... ......+. .+++.+.++.
T Consensus 195 -~---~~~~~~i~~~-~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (320)
T cd08243 195 -D---GAIAEQLRAA-PGGFDKVLELVGTA-TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSS 267 (320)
T ss_pred -C---ccHHHHHHHh-CCCceEEEECCChH-HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecc
Confidence 3 4677778777 44899999999985 488999999997 999999974322211 12222333 5678887775
Q ss_pred ccCCCccccHHHHHHHHHcCCcccceecc
Q 018022 331 FGGLKAKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 331 ~~~~~~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
..... .+.+++++++++++.+++.+..+
T Consensus 268 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 295 (320)
T cd08243 268 SGDVP-QTPLQELFDFVAAGHLDIPPSKV 295 (320)
T ss_pred hhhhh-HHHHHHHHHHHHCCceecccccE
Confidence 43321 35688899999999988754433
No 99
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2.1e-32 Score=258.93 Aligned_cols=262 Identities=17% Similarity=0.182 Sum_probs=213.2
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCC-CCCCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++.+++++ +.+++++.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++| +++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 799999988764 8889999999999999999999999999987664322 123458899999999999964 56899
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..+.. .|...+| +|++|+.++.++++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVSHHG-------------------GYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCCCCC-------------------cceeEEEEcHHHeEECCCC
Confidence 99999865320 2222233 9999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHh--cC-CCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRT--AN-VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~--~~-~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
+++++++.+++.+.|||.++... .. ...+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999998999998876432 23 345789999998 9999999999999999 8999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (362)
Q Consensus 250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (362)
+++.++ . ..+.+.++.++++|++||++|+. .+...+++++++ |+++.+|... ....++++..++.+++++.++
T Consensus 195 v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T cd08289 195 VIPREE---L-QEESIKPLEKQRWAGAVDPVGGK-TLAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGI 267 (326)
T ss_pred EEcchh---H-HHHHHHhhccCCcCEEEECCcHH-HHHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEE
Confidence 988765 3 34556666434899999999985 488999999997 9999999753 233455566677889999997
Q ss_pred ec
Q 018022 330 LF 331 (362)
Q Consensus 330 ~~ 331 (362)
..
T Consensus 268 ~~ 269 (326)
T cd08289 268 DS 269 (326)
T ss_pred Ee
Confidence 54
No 100
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.8e-32 Score=259.14 Aligned_cols=284 Identities=19% Similarity=0.130 Sum_probs=234.4
Q ss_pred eeEEEeccCCCc-----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCC
Q 018022 17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (362)
Q Consensus 17 ~ka~~~~~~~~~-----l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~ 91 (362)
|||+++.++++. +.+++++.|++.++||+||+.++++|++|+..+.+..+..+.|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999998863 566678888889999999999999999999888776554456789999999999999999999
Q ss_pred CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (362)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P 171 (362)
|++||+|+.... ...+ |+|++|+.++.++++++|
T Consensus 81 ~~~Gd~V~~~~~---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGD---------------------------ITRP-------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCC---------------------------CCCC-------------------ccceEEEEEchHHeeeCC
Confidence 999999974311 0012 389999999999999999
Q ss_pred CCCCccchhccccchhhhHHHHHHhcCCCC-----CCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh
Q 018022 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR 244 (362)
Q Consensus 172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~ 244 (362)
++++.++++.+++.+.+||+++.+...+.+ +++|+|+|+ |.+|++++++|+.+| . +|+++++++++.+.+++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998778788887 999999986 999999999999999 7 99999999999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCc
Q 018022 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK 324 (362)
Q Consensus 245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 324 (362)
+|+++++++++ ++.+.+....++++|++||++|+...+..++++++++ |+++.+|... ..+++..+..+++
T Consensus 194 ~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~ 264 (336)
T cd08252 194 LGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSA 264 (336)
T ss_pred cCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcccc
Confidence 99999888653 4556666443348999999999876689999999997 9999998642 3445555556788
Q ss_pred EEEEeeccCCC--c-------cccHHHHHHHHHcCCcccce
Q 018022 325 ILMGSLFGGLK--A-------KSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 325 ~i~g~~~~~~~--~-------~~~l~~~l~~~~~g~l~~~~ 356 (362)
++.++.+.... . .+.++++++++++|.+++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 305 (336)
T cd08252 265 SFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTL 305 (336)
T ss_pred eEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecce
Confidence 88887654311 1 13478899999999998754
No 101
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=6.7e-32 Score=255.27 Aligned_cols=284 Identities=17% Similarity=0.144 Sum_probs=225.1
Q ss_pred eEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 18 ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
||+++...+.+ ++++++|.|.+.++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|++ +++.+|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 68888887764 789999999999999999999999999999988886533 35688999999999998 55678999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+..+.. .|...+| +|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~~~g-------------------~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVSHDG-------------------GYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCCCCc-------------------cceEEEEEchhheEECCCCC
Confidence 9999865320 1222233 99999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHh--cCCCCCC-EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022 175 PPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v 250 (362)
++++++.+++.+.+||.++... ..+.+++ +|+|+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999998889998765333 3488898 9999998 9999999999999999 78888778888899999999988
Q ss_pred EcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (362)
Q Consensus 251 v~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (362)
++.++ .+. .++.+.++++|.++||+|+.. +...+++++++ |+++.+|... .....++...++.+++++.+..
T Consensus 195 ~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T TIGR02823 195 IDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGID 266 (323)
T ss_pred Ecccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEe
Confidence 88654 222 444554447999999999875 88999999997 9999999753 2334455566667899999976
Q ss_pred ccCCCc---cccHHHHHHHHHcCCcccc
Q 018022 331 FGGLKA---KSDIPILLKRYMDKWSYVP 355 (362)
Q Consensus 331 ~~~~~~---~~~l~~~l~~~~~g~l~~~ 355 (362)
+..... .+.++.+.+++..+.+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
T TIGR02823 267 SVYCPMALREAAWQRLATDLKPRNLESI 294 (323)
T ss_pred ccccCchhHHHHHHHHHHHhhcCCCcCc
Confidence 542211 1235666677778877653
No 102
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.7e-32 Score=254.76 Aligned_cols=275 Identities=20% Similarity=0.247 Sum_probs=225.7
Q ss_pred eeEEEeccCCC-ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 17 CRAAIATAPGE-PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 17 ~ka~~~~~~~~-~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
||++++.+.+. .+++++.+.|.+.++||+||+.++++|++|.....+. ..|.++|+|++|+|+++|+++..|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 68999987552 1777799999999999999999999999999876522 236789999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|+... . .|+|++|+.++.++++++|++++
T Consensus 77 d~V~~~~------------------------------~-------------------~g~~~~~~~v~~~~~~~ip~~~~ 107 (305)
T cd08270 77 ARVVGLG------------------------------A-------------------MGAWAELVAVPTGWLAVLPDGVS 107 (305)
T ss_pred CEEEEec------------------------------C-------------------CcceeeEEEEchHHeEECCCCCC
Confidence 9997431 1 14899999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
+++++.+++.+.+||+++...... ++++|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++|++.+++..
T Consensus 108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 185 (305)
T cd08270 108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG 185 (305)
T ss_pred HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence 999999999999999987555544 5999999998 9999999999999999 899999999999999999987665432
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHh--cCcEEEEeecc
Q 018022 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH--SGKILMGSLFG 332 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~--~~~~i~g~~~~ 332 (362)
. + +.++++|+++|++|+.. +..++++++.+ |+++.+|... .....+++..+.. ++.++.++++.
T Consensus 186 ~----~-------~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 186 S----E-------LSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred c----c-------ccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 2 1 12237999999999875 89999999997 9999999753 3345566666655 68999988765
Q ss_pred C-CCccccHHHHHHHHHcCCcccceeccc
Q 018022 333 G-LKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 333 ~-~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
. ....+.++.++++++++++++.+..++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 280 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDPRIGWRG 280 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccceeccEE
Confidence 3 112467899999999999987655443
No 103
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.8e-31 Score=250.40 Aligned_cols=288 Identities=23% Similarity=0.293 Sum_probs=240.3
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++.+++.+ +++.+++.|.+.++||+||+.++++|++|+..+.+..+. ...|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999886543 778888888889999999999999999999888775533 34678999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+.... .|+|++|+.++.++++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALLA-------------------------------------------------GGGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEecC-------------------------------------------------CCceeEEEEcCHHHhccCCCC
Confidence 9999974311 138999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
+++.+++.+...+.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+ .++++++++++.+.++++|.+.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999998899999998877788999999999997 9999999999999999 7999999999999999999988888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
... .++.+.+.+...+ ++|++||++|+.. +...+++++++ |+++.+|... .....+++..++.+++++.++..
T Consensus 191 ~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd05276 191 YRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLG-GAKAELDLAPLLRKRLTLTGSTL 264 (323)
T ss_pred CCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCC-CCCCCCchHHHHHhCCeEEEeec
Confidence 776 6777788777766 8999999999877 88899999997 9999998743 22345666666678999999876
Q ss_pred cCCCc-------cccHHHHHHHHHcCCcccceeccc
Q 018022 332 GGLKA-------KSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 332 ~~~~~-------~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
..... .+.+++++++++++++.+....+|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (323)
T cd05276 265 RSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVF 300 (323)
T ss_pred cchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEE
Confidence 54311 123577888999999876554433
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=4.4e-31 Score=248.22 Aligned_cols=291 Identities=23% Similarity=0.297 Sum_probs=240.3
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
||++++..++.+ +++++++.|.+.+++|+|++.++++|++|+..+.|..+. ...|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888876543 888999999999999999999999999999888776543 45788999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..+.. .+ ... |++++|+.++...++++|++
T Consensus 81 ~Gd~v~~~~~~------------------------~~-~~~-------------------g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG------------------------WG-RRQ-------------------GTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc------------------------cC-CCC-------------------cceeeEEEecHHHcEeCCCC
Confidence 99999865320 00 012 38999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++.++++.+.+++.+||+.+....++.++++++|+|+ |.+|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877789999999999997 9999999999999999 8999999999999999999998888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
... .++.+.+.+...+ ++|.+++++|+.. ....++.++++ |+++.+|... ...++++..++.++.++.+...
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd08253 196 YRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLL 268 (325)
T ss_pred CCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeeh
Confidence 766 6778888887766 8999999999876 78889999997 9999998743 3345666666677888887764
Q ss_pred cCCC---ccccHHHHHHHHHcCCcccceecc
Q 018022 332 GGLK---AKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 332 ~~~~---~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
+... ..+.++.+.++++++.+++.+..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 299 (325)
T cd08253 269 YTATPEERAAAAEAIAAGLADGALRPVIARE 299 (325)
T ss_pred hhcCHHHHHHHHHHHHHHHHCCCccCccccE
Confidence 4321 123466677788888887765444
No 105
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.3e-32 Score=257.62 Aligned_cols=277 Identities=25% Similarity=0.382 Sum_probs=211.2
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCC----CCCccccccceEEE---EEeC-CCCCCCCCCCEEEe
Q 018022 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA----VFPRILGHEAIGVV---ESVG-ENVDGVVEGDVVIP 100 (362)
Q Consensus 29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~----~~p~~~G~e~~G~V---v~vG-~~v~~~~~Gd~V~~ 100 (362)
...++.+.|.|++++++|++.++++|+.|..++.|.+... .+|.+++.++.|++ ...| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 5557899999999999999999999999999999888653 47755666655553 3344 23334556665542
Q ss_pred eCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchh
Q 018022 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180 (362)
Q Consensus 101 ~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa 180 (362)
.. . .|+|+||+++|...++++|++++++++|
T Consensus 100 ~~------------------------------~-------------------~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 FL------------------------------S-------------------SGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred cc------------------------------C-------------------CCceeeEEEcchhhccCCCCccChhhhh
Confidence 21 1 2499999999999999999999999999
Q ss_pred ccccchhhhHHHHHHhc------CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 181 LLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 181 ~~~~~~~ta~~~l~~~~------~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+++.++.|||.++.... ++++|++|||+|+ |++|++++|+|+..++ ..+++.++++++++++++|+++++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 9999999999987 9999999999999996 66666668999999999999999999
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC---CCCCccccCHH-HHHh---cCcEE
Q 018022 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD---QPGSQLSLSSF-EVLH---SGKIL 326 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~---~~~~~~~~~~~-~~~~---~~~~i 326 (362)
++ +++.+.+++.++++||+||||+|+.. ......++..+ |+...++.. ....... .+. .+.. ..+.+
T Consensus 210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 283 (347)
T KOG1198|consen 210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGL 283 (347)
T ss_pred CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEeccccccccccc-cchhhhhhhhheeeee
Confidence 98 99999999988449999999999975 67777788776 764444432 1111111 000 0111 01111
Q ss_pred EEeec---cCCCccccHHHHHHHHHcCCcccceecccC
Q 018022 327 MGSLF---GGLKAKSDIPILLKRYMDKWSYVPFSGTRA 361 (362)
Q Consensus 327 ~g~~~---~~~~~~~~l~~~l~~~~~g~l~~~~~~~~~ 361 (362)
.+... ......+.++.+.+++++|+|+|.++++|.
T Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p 321 (347)
T KOG1198|consen 284 KGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYP 321 (347)
T ss_pred eccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeee
Confidence 11110 011235889999999999999999999874
No 106
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.1e-31 Score=256.55 Aligned_cols=287 Identities=20% Similarity=0.207 Sum_probs=222.0
Q ss_pred eeEEEeccCCCc---eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCC---------------CCCCCcccccc
Q 018022 17 CRAAIATAPGEP---LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDF---------------PAVFPRILGHE 77 (362)
Q Consensus 17 ~ka~~~~~~~~~---l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~---------------~~~~p~~~G~e 77 (362)
|||+++.+++++ +++++++.|.|. ++||+|||+++++|++|+..+.|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999888775 889999999994 99999999999999999998877421 23568899999
Q ss_pred ceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 018022 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157 (362)
Q Consensus 78 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 157 (362)
++|+|+++|+++++|++||+|+..+.. +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999864321 1124999
Q ss_pred eeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCC----CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE
Q 018022 158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (362)
Q Consensus 158 ~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~ 232 (362)
+|+.++.++++++|++++.++++.+++.+.+||+++.+...+.+ |++|+|+|+ |.+|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998777777654 999999996 9999999999999999 78877
Q ss_pred cCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCc-
Q 018022 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ- 311 (362)
Q Consensus 233 ~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~- 311 (362)
.++ ++.+.++++|.+.+++..+ .++.+.+... +++|++||++|+. ....++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 265 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTD 265 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccccc
Confidence 754 6788889999988888765 4555555432 3799999999987 589999999997 99999986421111
Q ss_pred -cccC----H--HHHHhc-------CcEEEEeeccCCCccccHHHHHHHHHcCCcccceeccc
Q 018022 312 -LSLS----S--FEVLHS-------GKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 312 -~~~~----~--~~~~~~-------~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
..+. . ..++.. ...+.... .....+.+.+++++++++.+.+.+..+|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 326 (350)
T cd08248 266 KLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIKPVIDKVF 326 (350)
T ss_pred cccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEecccceee
Confidence 1110 0 011111 11111111 1112467999999999999887654443
No 107
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=8.9e-31 Score=245.36 Aligned_cols=285 Identities=23% Similarity=0.283 Sum_probs=234.6
Q ss_pred eEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 018022 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (362)
Q Consensus 18 ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G 95 (362)
||+.+..++.. +.+++.+.|.+.++||+|||.++++|++|+....+..+. .+|.++|||++|+|+.+|+++.+|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666665543 667777777789999999999999999999888776543 457789999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 018022 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (362)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~ 175 (362)
|+|+... . .|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~------------------------------~-------------------~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG------------------------------P-------------------PGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec------------------------------C-------------------CCceeEEEEecHHHceeCCCCCC
Confidence 9997431 0 13899999999999999999999
Q ss_pred ccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCC
Q 018022 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (362)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~ 254 (362)
..+++.+.+...++|+++.+..++.+|++|+|+|+ |.+|++++++++.+|+ .++++++++++.+.++++|++++++.+
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999888899999998878889999999999996 9999999999999999 899999999999999999999988877
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccC
Q 018022 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (362)
Q Consensus 255 ~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (362)
+ .++.+.+.+.+.+ ++|.+|+|+++. ....++++++++ |+++.+|.... ....+++..+..+++++.+.....
T Consensus 190 ~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 263 (320)
T cd05286 190 D---EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNASG-PVPPFDLLRLSKGSLFLTRPSLFH 263 (320)
T ss_pred c---hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecCCC-CCCccCHHHHHhcCcEEEEEehhh
Confidence 6 6788888888776 899999999985 488999999997 99999997432 233455555557889887654433
Q ss_pred CC-c----cccHHHHHHHHHcCCcccceecc
Q 018022 334 LK-A----KSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 334 ~~-~----~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
.. . .+.+.+++++++++.+++.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 294 (320)
T cd05286 264 YIATREELLARAAELFDAVASGKLKVEIGKR 294 (320)
T ss_pred hcCCHHHHHHHHHHHHHHHHCCCCcCcccce
Confidence 22 1 13456788999999988765443
No 108
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=3e-31 Score=237.23 Aligned_cols=270 Identities=20% Similarity=0.176 Sum_probs=222.5
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEe--CCCCCCCCCCCEEEeeCCCCC
Q 018022 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESV--GENVDGVVEGDVVIPHFLADC 106 (362)
Q Consensus 29 l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~v--G~~v~~~~~Gd~V~~~~~~~~ 106 (362)
|+++++++|+|+++|||||..|.|+.+..+.-+... +..-.|.-+|...+|.++.. -|..+.|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~-~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA-PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCC-cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 999999999999999999999999998544322222 22334777787776666553 2567789999999732
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc--hhcccc
Q 018022 107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR--ACLLSC 184 (362)
Q Consensus 107 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~--aa~~~~ 184 (362)
.+|+||..++.+.+.+++++.-... ...+.+
T Consensus 101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 2899999999999999986643222 334677
Q ss_pred chhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHH
Q 018022 185 GVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVS 262 (362)
Q Consensus 185 ~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~ 262 (362)
+..|||.+|.+....++|++|+|.+| |++|..+.|+||..|+ +|+++...++|.+++++ +|+|.++|++. +++.
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~ 209 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFA 209 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHH
Confidence 89999999999999999999999987 9999999999999999 99999999999999988 99999999999 8999
Q ss_pred HHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc-----ccCHHHHHhcCcEEEEeeccCCCc-
Q 018022 263 QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-----SLSSFEVLHSGKILMGSLFGGLKA- 336 (362)
Q Consensus 263 ~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~-----~~~~~~~~~~~~~i~g~~~~~~~~- 336 (362)
+++++.++.|+|+.||++|++- +...+..|+.. +||.++|.-...... +-.+..++.|++++.|+...+...
T Consensus 210 ~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~ 287 (340)
T COG2130 210 QALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ 287 (340)
T ss_pred HHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence 9999999889999999999987 99999999997 999999974322211 223345777899999998733321
Q ss_pred --cccHHHHHHHHHcCCccccee
Q 018022 337 --KSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 337 --~~~l~~~l~~~~~g~l~~~~~ 357 (362)
.+.++++..|+++|+|+.+.+
T Consensus 288 ~~~e~~~~l~~wv~~GKi~~~et 310 (340)
T COG2130 288 RFPEALRELGGWVKEGKIQYRET 310 (340)
T ss_pred hhHHHHHHHHHHHHcCceeeEee
Confidence 367899999999999998874
No 109
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.5e-30 Score=246.11 Aligned_cols=284 Identities=14% Similarity=0.116 Sum_probs=225.1
Q ss_pred eeEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++.++++ .++++++|.|+|+++||+||+.++++|++|...+.+.... ..+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998885 3999999999999999999999999999999888776532 34688899999999999 6778899
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..... .+... .|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~~-------------------~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG------------------------VGERH-------------------WGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc------------------------CCCCC-------------------CCcceeEEEEchHHeeeCCCC
Confidence 99999864210 11111 248999999999999999999
Q ss_pred CCccchhccccchhhhHHHHH--HhcCCC-CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE
Q 018022 174 VPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 249 (362)
++.++++.+++.+++++.++. ...... ++++|+|+|+ |++|++++|+|+.+|+ ++++++.++++.+.++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999988888887643 224445 6789999998 9999999999999999 8899888999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (362)
Q Consensus 250 vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (362)
++++++ ....++.+..+++|.++|++++.. +...+..++.+ |+++.+|.... ....+++..++.+++++.+.
T Consensus 195 ~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08288 195 IIDRAE-----LSEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGI 266 (324)
T ss_pred EEEcch-----hhHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEE
Confidence 998765 223555555557899999999754 77888889997 99999997522 23345555565789999997
Q ss_pred eccCCCc---cccHHHHHHHHHcCCccc
Q 018022 330 LFGGLKA---KSDIPILLKRYMDKWSYV 354 (362)
Q Consensus 330 ~~~~~~~---~~~l~~~l~~~~~g~l~~ 354 (362)
.+..... .+.++.+++++.++.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (324)
T cd08288 267 DSVMAPIERRRAAWARLARDLDPALLEA 294 (324)
T ss_pred EeecccchhhHHHHHHHHHHHhcCCccc
Confidence 6433211 235667777888888875
No 110
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.6e-31 Score=247.01 Aligned_cols=285 Identities=23% Similarity=0.283 Sum_probs=227.6
Q ss_pred eeEEEeccCC--CceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 018022 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 17 ~ka~~~~~~~--~~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
|||+++.+++ +.+++++++.|.+.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999999 35999999999999999999999999999999888776543334788999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+..+.. .. .|+|++|+.++...++++|+++
T Consensus 81 Gd~V~~~~~~---------------------------~~-------------------~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL---------------------------AR-------------------GGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC---------------------------CC-------------------CccceeEEEeCHHHeEECCCCC
Confidence 9999864310 01 2389999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+..+++.+.+.+.+||+++.+..++.+|++++|+|+ |.+|++++++++..|+ .++++. ++++.+.+.++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999998899999998878889999999999998 8899999999999999 777776 6778888888999988887
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCH--HHHHhcCcEEEEee
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS--FEVLHSGKILMGSL 330 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~--~~~~~~~~~i~g~~ 330 (362)
.. .++.+.+.+...+ ++|.+++++++.. ....+++++++ |+++.+|..... . .... ..+..+++.+.+..
T Consensus 193 ~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T cd08271 193 ND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDA-S-PDPPFTRALSVHEVALGAAH 265 (325)
T ss_pred CC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCC-c-chhHHhhcceEEEEEecccc
Confidence 76 6677888887776 8999999999876 66789999997 999999753221 1 1111 11222333333332
Q ss_pred ccCC-----CccccHHHHHHHHHcCCcccce
Q 018022 331 FGGL-----KAKSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 331 ~~~~-----~~~~~l~~~l~~~~~g~l~~~~ 356 (362)
.... ...+.+.+++++++++.+++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 296 (325)
T cd08271 266 DHGDPAAWQDLRYAGEELLELLAAGKLEPLV 296 (325)
T ss_pred cccchhhHHHHHHHHHHHHHHHHCCCeeecc
Confidence 1111 1124567888999999887643
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-30 Score=245.01 Aligned_cols=284 Identities=21% Similarity=0.238 Sum_probs=234.3
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++.+++.+ +++++.+.|.+.+++|+|++.++++|++|.....+.... ...|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 789999988764 788888888889999999999999999999888776432 34578899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+.... |... ..|+|++|+.++...++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~~------------------~~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLGG------------------LQGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcCC------------------CCCceeEEEEecHHHcccCCCC
Confidence 9999985421 0000 0248999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++..+++.+++.+.+||+++.+..++.++++++|+|+ |.+|++++++++.+|+ +|++++++ ++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999998899999998878899999999999986 9999999999999999 88888887 8999999999988888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
... . +.+.+.+.+.+ ++|.++|++++.. +...+++++++ |+++.+|... . .++.....+++.+.+..+
T Consensus 195 ~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~--~~~~~~~~~~~~~~~~~~ 263 (326)
T cd08272 195 YRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---T--HDLAPLSFRNATYSGVFT 263 (326)
T ss_pred cch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---c--cchhhHhhhcceEEEEEc
Confidence 766 5 77888888877 8999999999865 88899999997 9999998642 2 222233467888888764
Q ss_pred cC--CC------ccccHHHHHHHHHcCCccccee
Q 018022 332 GG--LK------AKSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 332 ~~--~~------~~~~l~~~l~~~~~g~l~~~~~ 357 (362)
.. .. ..+.+++++++++++.+++.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 297 (326)
T cd08272 264 LLPLLTGEGRAHHGEILREAARLVERGQLRPLLD 297 (326)
T ss_pred ccccccccchhhHHHHHHHHHHHHHCCCcccccc
Confidence 42 10 1356888899999999886543
No 112
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2e-30 Score=245.63 Aligned_cols=282 Identities=20% Similarity=0.200 Sum_probs=225.8
Q ss_pred eeEEEeccCCC------ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCC
Q 018022 17 CRAAIATAPGE------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGE 87 (362)
Q Consensus 17 ~ka~~~~~~~~------~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~ 87 (362)
.||+++.+..+ .+++++++.|++.+++|+||+.++++|++|.....+... +...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46667665431 288999999999999999999999999987655544321 122356789999999999996
Q ss_pred CCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-Cc
Q 018022 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AH 166 (362)
Q Consensus 88 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~-~~ 166 (362)
. +|++||+|+.. ++|++|+.++. +.
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 4 79999999731 27999999999 99
Q ss_pred eEEcCCCCC--ccchhc-cccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 018022 167 VVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (362)
Q Consensus 167 ~~~~P~~l~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~ 242 (362)
++++|++++ +.+++. +.+.+.+||+++.....+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999985 445544 77899999998877788999999999996 9999999999999999 899999999999999
Q ss_pred Hh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCcc----ccCHH
Q 018022 243 KR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL----SLSSF 317 (362)
Q Consensus 243 ~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~----~~~~~ 317 (362)
++ +|+++++++++ .++.+.+.+.+++++|++|||+|+. .++.++++++++ |+++.+|........ .++..
T Consensus 187 ~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~ 261 (329)
T cd05288 187 VEELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLG 261 (329)
T ss_pred HhhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCC-ceEEEEeeccCcccccccccccHH
Confidence 88 99999998876 6777888777755899999999985 489999999997 999999864332211 13455
Q ss_pred HHHhcCcEEEEeeccCCCc--cccHHHHHHHHHcCCcccceec
Q 018022 318 EVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKWSYVPFSG 358 (362)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~l~~~~~~ 358 (362)
.++.++.++.++.+..... .+.+.+++++++++.+++....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~ 304 (329)
T cd05288 262 NIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV 304 (329)
T ss_pred HHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccc
Confidence 6677899999876544321 2567889999999998875433
No 113
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.98 E-value=4.3e-30 Score=241.65 Aligned_cols=286 Identities=22% Similarity=0.256 Sum_probs=237.1
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+.+..++.. +++++.+.|.+.+++++|||.++++|++|.....+..+. ..+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 688898876654 667777777789999999999999999999888765532 34578999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+... .+ |+|++|+.++...++++|++
T Consensus 81 ~Gd~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV------------------------------AG-------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc------------------------------CC-------------------CcceeEEEecHHHcEeCCCC
Confidence 999997431 01 38999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++..+++.+.+.+.++|+++.+...++++++++|+|+ |.+|++++++++.+|+ +++++.+++++.+.++++|.+.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999898899999998888899999999999997 9999999999999999 8999999999999998899888887
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
... .++.+.++...++ ++|++++++|... +...+++++++ |+++.+|...... ..+++..++.+++++.+...
T Consensus 191 ~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (325)
T TIGR02824 191 YRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRK-AELDLGPLLAKRLTITGSTL 264 (325)
T ss_pred cCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCc-CCCChHHHHhcCCEEEEEeh
Confidence 765 6677888877776 8999999999864 88899999997 9999998743222 25666667788999999876
Q ss_pred cCCCc-------cccHHHHHHHHHcCCcccceec
Q 018022 332 GGLKA-------KSDIPILLKRYMDKWSYVPFSG 358 (362)
Q Consensus 332 ~~~~~-------~~~l~~~l~~~~~g~l~~~~~~ 358 (362)
..... .+.+.+++++++++.+++....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 298 (325)
T TIGR02824 265 RARPVAEKAAIAAELREHVWPLLASGRVRPVIDK 298 (325)
T ss_pred hhcchhhhHHHHHHHHHHHHHHHHCCcccCcccc
Confidence 54211 1335667889999988765433
No 114
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=7.4e-30 Score=240.35 Aligned_cols=292 Identities=25% Similarity=0.304 Sum_probs=236.0
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~ 93 (362)
|||+++...+.+ +++++.+.|.+.+++++|+|.++++|++|..+..+.... ..+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 688999876643 777788888889999999999999999999887776533 34578899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 018022 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (362)
Q Consensus 94 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~ 173 (362)
+||+|+..+.. +...+ |++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~-------------------------~~~~~-------------------g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAA-------------------------DLGQY-------------------GTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEecccc-------------------------ccCCC-------------------ccceEEEEechHhcEeCCCC
Confidence 99999865321 01112 38999999999999999999
Q ss_pred CCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 174 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
++.++++.+.+.+.++|.++.....+.++++++|+|+ |.+|++++++++..|+ .+++++++.++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998878889999999999998 9999999999999999 8999998999999998899988888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeec
Q 018022 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (362)
.+. .++.+.+.+...+ ++|++++++|+.. ...++++++++ |+++.+|.... ....++....+.+++.+.+...
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (328)
T cd08268 196 TDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSL 269 (328)
T ss_pred cCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEec
Confidence 776 6777778877766 8999999999854 88899999997 99999987433 3334555545778999988765
Q ss_pred cCCC-ccc----cHHHHHHHHHcCCcccceecc
Q 018022 332 GGLK-AKS----DIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 332 ~~~~-~~~----~l~~~l~~~~~g~l~~~~~~~ 359 (362)
.... .++ .++.+.++++++.+.+....+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (328)
T cd08268 270 DEITLDPEARRRAIAFILDGLASGALKPVVDRV 302 (328)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCCcCCcccE
Confidence 4311 122 345555667788877654333
No 115
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.98 E-value=9.5e-30 Score=243.73 Aligned_cols=291 Identities=18% Similarity=0.199 Sum_probs=216.7
Q ss_pred eEEEeccCCCceEEEEeecCCC---CCCeEEEEEeeeecchhhhhhhhcCCCCC-CCCccccccceEEEEEeCCCCC-CC
Q 018022 18 RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPA-VFPRILGHEAIGVVESVGENVD-GV 92 (362)
Q Consensus 18 ka~~~~~~~~~l~l~~~~~p~~---~~~eVlVkv~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~Vv~vG~~v~-~~ 92 (362)
|+++++++++++++++++.|.| .++||+||+.++++|++|+..+.+..... ..|.++|+|++|+|+++|++++ +|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888888777776 89999999999999999998775432222 2478899999999999999998 89
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC----ceE
Q 018022 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA----HVV 168 (362)
Q Consensus 93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~----~~~ 168 (362)
++||+|+......| .. .|+|++|++++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~-------------------------~~-------------------~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY-------------------------GG-------------------QGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC-------------------------CC-------------------CceeeEEEEEccccccceeE
Confidence 99999986532110 01 2489999999987 799
Q ss_pred EcCCCCCccchhccccchhhhHHHHHHhc-CCCCCCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc
Q 018022 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF 245 (362)
Q Consensus 169 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~ 245 (362)
++|+++++.+++.+++++.+||+++.+.. ++++|++|+|+|+ |.+|++++++|+.+| .+.++++.+ +++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence 99999999999999999999999876666 7999999999998 899999999999875 436777764 5556688899
Q ss_pred CCcEEEcCCCCCCcc---HHHH-HHhhcCC-CccEEEEcCCCHHHHHHHHHHhc---cCCceEEEEccCCCC--Cccc--
Q 018022 246 GVTEFVNSKNCGDKS---VSQI-IIDMTDG-GADYCFECVGLASLVQEAYACCR---KGWGKTIVLGVDQPG--SQLS-- 313 (362)
Q Consensus 246 g~~~vv~~~~~~~~~---~~~~-i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~---~~~G~iv~~G~~~~~--~~~~-- 313 (362)
|++++++.++ .+ +... ++..+++ ++|++|||+|+......++++++ ++ |+++.++..... ....
T Consensus 197 g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~ 272 (352)
T cd08247 197 GADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFN 272 (352)
T ss_pred CCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhh
Confidence 9999998766 33 4444 4444434 89999999999666889999999 97 999987532211 0001
Q ss_pred ------cCHH----HHHhcCcEEEEeeccCCCccccHHHHHHHHHcCCcccceecc
Q 018022 314 ------LSSF----EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 314 ------~~~~----~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
+... ....+...+....... ..+.+++++++++++.|++.+..+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~ 326 (352)
T cd08247 273 SWDNPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVKPPIDSV 326 (352)
T ss_pred hccccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeEeeeccE
Confidence 1111 1112223333221111 125688899999999988765444
No 116
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=4.3e-30 Score=243.49 Aligned_cols=283 Identities=25% Similarity=0.280 Sum_probs=223.0
Q ss_pred eEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 18 ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
||+++...+.+ +++++.+.|.|.++||+||+.++++|++|..++.+..+. ..+|.++|+|++|+|+++|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888887754 888999999999999999999999999999988776543 356889999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+..+. + |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR------------------------------V-------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC------------------------------C-------------------cceeeEEEechHHeEECCCCC
Confidence 999985421 1 389999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~ 253 (362)
+..+++.+.+.+.+||+++.+..++.++++|+|+|+ |.+|++++++|+.+|+ +|+++.. +++.+.++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999998877788999999999997 9999999999999999 8888887 88899999999754 444
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccC--H------------HHH
Q 018022 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS--S------------FEV 319 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~--~------------~~~ 319 (362)
.. .++.+. ....+++|.++|++|+.. +..++++++++ |+++.+|.........++ + ...
T Consensus 190 ~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T cd08273 190 RT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLP 262 (331)
T ss_pred CC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhccee
Confidence 43 344333 333348999999999887 88999999997 999999975322221221 1 111
Q ss_pred HhcCcEEEEeeccCC----CccccHHHHHHHHHcCCcccceecc
Q 018022 320 LHSGKILMGSLFGGL----KAKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 320 ~~~~~~i~g~~~~~~----~~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
+.++.++.+...... ...+.+++++++++++.+.+.+..+
T Consensus 263 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~ 306 (331)
T cd08273 263 TGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKR 306 (331)
T ss_pred ccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceE
Confidence 222333333322110 0136788999999999998754443
No 117
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=2.5e-29 Score=236.05 Aligned_cols=285 Identities=25% Similarity=0.382 Sum_probs=234.8
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~-~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~ 92 (362)
|||+++..++.. +++.+.+ |.+. +++++||+.++++|++|+..+.+.... ...|.++|+|++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 689998855433 7777777 7666 499999999999999999888776532 3447789999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 018022 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (362)
Q Consensus 93 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~ 172 (362)
++||+|+..+. .|+|++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCCC
Confidence 99999985420 13899999999999999999
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv 251 (362)
+++..+++.+.+.+.+||+++.....+.++++|+|+|+ |.+|++++++|+..|+ .|+++++++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99998888888899999998777888999999999998 9999999999999999 799999999999999999998888
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 018022 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (362)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (362)
+.+. .++.+.+.+.+++ ++|.+++++|+.. +..++++++++ |+++.+|..... ...++....+.+++++.+..
T Consensus 190 ~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 263 (323)
T cd08241 190 DYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGE-IPQIPANLLLLKNISVVGVY 263 (323)
T ss_pred ecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCC-cCcCCHHHHhhcCcEEEEEe
Confidence 8776 6788888888777 8999999999854 88899999997 999999874322 11244445567899999987
Q ss_pred ccCCCc------cccHHHHHHHHHcCCcccceec
Q 018022 331 FGGLKA------KSDIPILLKRYMDKWSYVPFSG 358 (362)
Q Consensus 331 ~~~~~~------~~~l~~~l~~~~~g~l~~~~~~ 358 (362)
+..+.. .+.+++++++++++.+++....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (323)
T cd08241 264 WGAYARREPELLRANLAELFDLLAEGKIRPHVSA 297 (323)
T ss_pred cccccchhHHHHHHHHHHHHHHHHCCCcccccce
Confidence 654321 2567889999999988765433
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.97 E-value=2.5e-29 Score=234.85 Aligned_cols=278 Identities=21% Similarity=0.260 Sum_probs=225.0
Q ss_pred eeEEEeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCC---CCCCCccccccceEEEEEeCCCCCC
Q 018022 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG 91 (362)
Q Consensus 17 ~ka~~~~~~~~~--l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~---~~~~p~~~G~e~~G~Vv~vG~~v~~ 91 (362)
|||+++..++.. +++++.+.|.++++||+||+.++++|++|+..+.+... ...+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789999887753 56778888888999999999999999999998877653 2345889999999999999999999
Q ss_pred CCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 018022 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (362)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P 171 (362)
+++||+|+..+.. .. .|+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~---------------------------~~-------------------~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF---------------------------TR-------------------GGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC---------------------------CC-------------------CCcceeEEEecHHHhccCC
Confidence 9999999865321 01 1389999999999999999
Q ss_pred CCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE
Q 018022 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (362)
Q Consensus 172 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v 250 (362)
++++...++.+.+.+.++|+++.....+.++++|+|+|+ |.+|++++++++..|+ +++++..++ +.+.++++|.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999888899999998777777999999999997 9999999999999999 788887777 8888888998888
Q ss_pred EcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 018022 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (362)
Q Consensus 251 v~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (362)
++.+. .++.+ ...+ ++|.++|++|+.. ...++++++++ |+++.+|.... . .. ....+++.+...
T Consensus 193 ~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~-~~----~~~~~~~~~~~~ 257 (309)
T cd05289 193 IDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPP-A-EQ----AAKRRGVRAGFV 257 (309)
T ss_pred EeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCc-c-hh----hhhhccceEEEE
Confidence 87765 34433 3334 8999999999884 88999999997 99999987432 1 11 334457777666
Q ss_pred eccCCCccccHHHHHHHHHcCCcccceecc
Q 018022 330 LFGGLKAKSDIPILLKRYMDKWSYVPFSGT 359 (362)
Q Consensus 330 ~~~~~~~~~~l~~~l~~~~~g~l~~~~~~~ 359 (362)
.+... .+.+++++++++++.+++.+..+
T Consensus 258 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 285 (309)
T cd05289 258 FVEPD--GEQLAELAELVEAGKLRPVVDRV 285 (309)
T ss_pred Eeccc--HHHHHHHHHHHHCCCEEEeeccE
Confidence 54322 57899999999999887654433
No 119
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=4.4e-29 Score=232.72 Aligned_cols=269 Identities=23% Similarity=0.270 Sum_probs=217.7
Q ss_pred cCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccC
Q 018022 36 VDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRS 114 (362)
Q Consensus 36 ~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~ 114 (362)
.|.+.+++|+||+.++++|++|+..+.+..+. ..+|.++|+|++|+|+++|+++++|++||+|+....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 57789999999999999999999988876543 356889999999999999999999999999985421
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHH
Q 018022 115 KKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194 (362)
Q Consensus 115 ~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~ 194 (362)
..+ |+|++|+.++.+.++++|++++.++++.+++.+.+||+++
T Consensus 71 -----------------~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 71 -----------------ESM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -----------------CCC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 011 3899999999999999999999999999998999999986
Q ss_pred HhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-C
Q 018022 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g 272 (362)
+...+++|++++|+|+ |.+|++++++++.+|+ +++++++++++.+.++++|++.+++... .++.+.+..++++ +
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~ 189 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRG 189 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCC
Confidence 6789999999999976 9999999999999999 8999999999999999999999998876 6788888888877 9
Q ss_pred ccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC------ccccHHHHHHH
Q 018022 273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKR 346 (362)
Q Consensus 273 ~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~l~~~l~~ 346 (362)
+|+++|++++. .....+++++++ |+++.+|.........++...+. ++..+....+.... ..+.+.+++++
T Consensus 190 ~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
T cd08251 190 VDVVINTLSGE-AIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSL 266 (303)
T ss_pred ceEEEECCcHH-HHHHHHHHhccC-cEEEEEeccCCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence 99999999764 488899999997 99999986432222334443332 34444333221110 12457888999
Q ss_pred HHcCCcccceecc
Q 018022 347 YMDKWSYVPFSGT 359 (362)
Q Consensus 347 ~~~g~l~~~~~~~ 359 (362)
+++|.+++....+
T Consensus 267 ~~~g~~~~~~~~~ 279 (303)
T cd08251 267 VEEGELRPTVSRI 279 (303)
T ss_pred HHCCCccCCCceE
Confidence 9999988654443
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=5.1e-28 Score=229.24 Aligned_cols=287 Identities=21% Similarity=0.291 Sum_probs=229.0
Q ss_pred eEEEeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 018022 18 RAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (362)
Q Consensus 18 ka~~~~~~~~--~l~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 94 (362)
||+++...+. .+++++.+.|.|.+++|+||+.++++|++|...+.+.... ...|.++|+|++|+|+.+|+++.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666665553 2778788888889999999999999999999988776532 345788999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 018022 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (362)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l 174 (362)
||+|+.... + |+|++|+.++...++++|+++
T Consensus 81 G~~V~~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR------------------------------F-------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC------------------------------C-------------------CeeeeEEEecHHHeEECCCCC
Confidence 999985421 1 389999999999999999999
Q ss_pred CccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEc
Q 018022 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVN 252 (362)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~ 252 (362)
+..+++.+.+.+.++|+++.+..+++++++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999888899999998878889999999999998 99999999999998 33 33333 2356788888899988888
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCC---------------ccccCHH
Q 018022 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS---------------QLSLSSF 317 (362)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~---------------~~~~~~~ 317 (362)
.+. .++.+.++..+++++|+++|++|+.. ...++++++++ |+++.+|...... .+.+++.
T Consensus 190 ~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (337)
T cd08275 190 YRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPM 264 (337)
T ss_pred CCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHH
Confidence 876 67888888777558999999999865 78899999997 9999998643211 1223335
Q ss_pred HHHhcCcEEEEeeccCCCc-----cccHHHHHHHHHcCCcccceeccc
Q 018022 318 EVLHSGKILMGSLFGGLKA-----KSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~-----~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.++.+++++.++.+..... ...+.+++++++++.+++....+|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (337)
T cd08275 265 KLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVF 312 (337)
T ss_pred HHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEE
Confidence 5677899999886543211 134778899999999887654443
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=3.9e-28 Score=224.15 Aligned_cols=260 Identities=22% Similarity=0.213 Sum_probs=214.1
Q ss_pred CeEEEEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCC
Q 018022 42 HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (362)
Q Consensus 42 ~eVlVkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~ 121 (362)
+||+||+.++++|++|.....+.. ..+|.++|+|++|+|+++|++++.|++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887764 24578999999999999999999999999997532
Q ss_pred CCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCC
Q 018022 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (362)
Q Consensus 122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~ 201 (362)
.|+|++|+.++.+.++++|++++..+++.+.+++.++|.++.+..++++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 2489999999999999999999999999988899999998878889999
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC--CcEEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g--~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vi 277 (362)
|++|+|+|+ |.+|++++++++.+|+ +++++++++++.+.+++++ ++.+++... .++.+.+++.+.+ ++|.+|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi 184 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVL 184 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEE
Confidence 999999986 9999999999999999 8999998999999998888 678888766 6788888888877 899999
Q ss_pred EcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC------ccccHHHHHHHHHcCC
Q 018022 278 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKW 351 (362)
Q Consensus 278 d~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~l~~~l~~~~~g~ 351 (362)
|++|+. .+..+++.++++ |+++.+|.........++... +.+++.+....+.... ..+.+.++++++++++
T Consensus 185 ~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (293)
T cd05195 185 NSLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGV 261 (293)
T ss_pred eCCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCC
Confidence 999988 589999999997 999999875322112333332 3356776665433221 1245788999999999
Q ss_pred cccceeccc
Q 018022 352 SYVPFSGTR 360 (362)
Q Consensus 352 l~~~~~~~~ 360 (362)
+++....++
T Consensus 262 ~~~~~~~~~ 270 (293)
T cd05195 262 LKPLPPTVV 270 (293)
T ss_pred cccCCCeee
Confidence 887655443
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.1e-27 Score=225.24 Aligned_cols=273 Identities=22% Similarity=0.224 Sum_probs=210.3
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecchhhhhhhhcCCCC---CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCC
Q 018022 30 VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADC 106 (362)
Q Consensus 30 ~l~~~~~p~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~ 106 (362)
++++.+.|.+.++||+||+.++++|++|...+.|.... ...|..+|||++|+|+++|+++.+|++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 77888999999999999999999999999988776521 2357789999999999999999999999999865321
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccch
Q 018022 107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186 (362)
Q Consensus 107 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~ 186 (362)
.. .|+|++|+.++.+.++++|++++.++++.+.+.+
T Consensus 93 -------------------------~~-------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KG-------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CC-------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 01 1389999999999999999999999999999899
Q ss_pred hhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHH
Q 018022 187 STGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 265 (362)
Q Consensus 187 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i 265 (362)
.+||+++.....++++++|+|+|+ |.+|++++++|+.+|+ +|++++++ ++.+.++++|.+++++.+. .++.
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~--- 200 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV--- 200 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence 999998777777999999999998 9999999999999999 88888865 8888899999988888765 3333
Q ss_pred HhhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEccCCCCCcccc---CHHHHHhcCcEEEEeeccCCCccccH
Q 018022 266 IDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDI 340 (362)
Q Consensus 266 ~~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~~l 340 (362)
...+.+ ++|++++|+|+. ......+..++++ |+++.+|.......... .+..... ...+....... ..+.+
T Consensus 201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~ 276 (319)
T cd08267 201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGG-GRRLKFFLAKP--NAEDL 276 (319)
T ss_pred hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccc-cceEEEEEecC--CHHHH
Confidence 334444 899999999953 2234444459997 99999997532222221 1111111 22222222222 25789
Q ss_pred HHHHHHHHcCCcccceeccc
Q 018022 341 PILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 341 ~~~l~~~~~g~l~~~~~~~~ 360 (362)
++++++++++++++.+..+|
T Consensus 277 ~~~~~~l~~~~~~~~~~~~~ 296 (319)
T cd08267 277 EQLAELVEEGKLKPVIDSVY 296 (319)
T ss_pred HHHHHHHHCCCeeeeeeeEE
Confidence 99999999999887655443
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=1.9e-27 Score=219.52 Aligned_cols=251 Identities=21% Similarity=0.252 Sum_probs=207.4
Q ss_pred EEEeeeecchhhhhhhhcCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCC
Q 018022 46 VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125 (362)
Q Consensus 46 Vkv~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~ 125 (362)
||+.++++|++|...+.+..+ .|.++|+|++|+|+++|+.++.|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998877643 367899999999999999999999999997431
Q ss_pred CCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEE
Q 018022 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205 (362)
Q Consensus 126 ~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~v 205 (362)
.|+|++|+.++.++++++|+++++.+++.+.+.+.++|+++.+...+.+|++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 24899999999999999999999999999999999999987788899999999
Q ss_pred EEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC--cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCC
Q 018022 206 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281 (362)
Q Consensus 206 lI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g 281 (362)
+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+.+++ ++|.+||++|
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~ 184 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLA 184 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCC
Confidence 99986 9999999999999999 89999999999999999998 77888766 6788888887776 8999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCC-----ccccHHHHHHHHHcCCcccce
Q 018022 282 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKWSYVPF 356 (362)
Q Consensus 282 ~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~l~~~l~~~~~g~l~~~~ 356 (362)
+ ..+...+++++++ |+++.+|.........+++.. +.+++++.+..+.... ..+.+.+++++++++++++..
T Consensus 185 ~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (288)
T smart00829 185 G-EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLP 261 (288)
T ss_pred H-HHHHHHHHhccCC-cEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcC
Confidence 6 4588899999997 999999974322223344433 3557777665443211 124577888999999887643
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=9.4e-25 Score=194.96 Aligned_cols=283 Identities=19% Similarity=0.165 Sum_probs=215.0
Q ss_pred eeeEEEeccCC------CceEE--EEeecC-CCCCCeEEEEEeeeecchhhhhhhhcCCCC-CCCCccccc----cceEE
Q 018022 16 QCRAAIATAPG------EPLVI--DEVIVD-PPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGH----EAIGV 81 (362)
Q Consensus 16 ~~ka~~~~~~~------~~l~l--~~~~~p-~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~-~~~p~~~G~----e~~G~ 81 (362)
+-|++++...- .+|.+ ++++++ .+++++||||.+|.+..|.-...+....+. .-.|+.||. ..+|+
T Consensus 3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~k 82 (343)
T KOG1196|consen 3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAK 82 (343)
T ss_pred cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEE
Confidence 34566665421 12444 344444 458999999999999987765444322211 112344443 67899
Q ss_pred EEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEE
Q 018022 82 VESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161 (362)
Q Consensus 82 Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~ 161 (362)
|++. +.++|++||.|.... +|.||.+
T Consensus 83 Vi~S--~~~~~~~GD~v~g~~----------------------------------------------------gWeeysi 108 (343)
T KOG1196|consen 83 VIDS--GHPNYKKGDLVWGIV----------------------------------------------------GWEEYSV 108 (343)
T ss_pred EEec--CCCCCCcCceEEEec----------------------------------------------------cceEEEE
Confidence 9996 457899999995221 7999999
Q ss_pred eecCc--eEEcCC--CCCccchh-ccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 162 LDIAH--VVKVDP--TVPPNRAC-LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 162 v~~~~--~~~~P~--~l~~~~aa-~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
++... .+++|. ++++.... ++.++..|||..+++...+++|++|+|-|| |.+|+.+.|+|+.+|+ .|+++..+
T Consensus 109 i~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS 187 (343)
T KOG1196|consen 109 ITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGS 187 (343)
T ss_pred ecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCC
Confidence 97653 444444 45544433 467788999999999999999999999988 9999999999999999 99999999
Q ss_pred chHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC----CC
Q 018022 236 SEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP----GS 310 (362)
Q Consensus 236 ~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~----~~ 310 (362)
++|.++++. +|.+..+||++ +.++.++++...++|+|+-||.+|+.. +...+..|+.. |||+++|+-.. ..
T Consensus 188 ~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~ 263 (343)
T KOG1196|consen 188 KEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENP 263 (343)
T ss_pred hhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCC
Confidence 999999875 79999999998 348889999988889999999999988 99999999997 99999998531 11
Q ss_pred ccccCHHHHHhcCcEEEEeeccCCCc--cccHHHHHHHHHcCCccccee
Q 018022 311 QLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKWSYVPFS 357 (362)
Q Consensus 311 ~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~l~~~l~~~~~g~l~~~~~ 357 (362)
+.--+...++.|++++.|+...++.+ .+.++.+..++++|||+..-+
T Consensus 264 ~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ed 312 (343)
T KOG1196|consen 264 EGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVED 312 (343)
T ss_pred ccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehh
Confidence 11224467888999999987766553 356788899999999987654
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=1.2e-24 Score=201.37 Aligned_cols=225 Identities=24% Similarity=0.329 Sum_probs=182.4
Q ss_pred CCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcee
Q 018022 68 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 147 (362)
Q Consensus 68 ~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~ 147 (362)
.++|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------- 51 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---------------------------------------------- 51 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----------------------------------------------
Confidence 3489999999999999999999999999999742
Q ss_pred cccccccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC
Q 018022 148 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 227 (362)
Q Consensus 148 ~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~ 227 (362)
+.|++|+.++.+.++++|+++++++++.+ +.+.+||+++ ...+++++++++|+|+|.+|++++++|+.+|.+
T Consensus 52 ------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~ 123 (277)
T cd08255 52 ------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAR 123 (277)
T ss_pred ------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 16899999999999999999999998888 6899999986 578999999999998899999999999999994
Q ss_pred EEEEEcCCchHHHHHHhcC-CcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022 228 RIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 228 ~vi~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
+|+++++++++.++++++| .+++++..+ ..+.+ ++|.+||+++....+...+++++++ |+++.+|.
T Consensus 124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~ 191 (277)
T cd08255 124 EVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGW 191 (277)
T ss_pred cEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEec
Confidence 4999999999999999999 555544322 11233 8999999999877789999999997 99999997
Q ss_pred CCCCCccccCHHHHHhcCcEEEEeeccCCC---------ccccHHHHHHHHHcCCcccceeccc
Q 018022 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK---------AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---------~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
.... . ......+..+.+++.+..+.... ..+.+++++++++++++++.+..+|
T Consensus 192 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ 253 (277)
T cd08255 192 YGLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRV 253 (277)
T ss_pred cCCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCcc
Confidence 5432 2 22223455567788877654321 1267899999999999887655443
No 126
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=1.7e-23 Score=166.73 Aligned_cols=108 Identities=35% Similarity=0.541 Sum_probs=96.5
Q ss_pred CCeEEEEEeeeecchhhhhhhhcC-CCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCC
Q 018022 41 SHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNL 119 (362)
Q Consensus 41 ~~eVlVkv~~~~i~~~d~~~~~g~-~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 119 (362)
|+||||||+++|||++|++++.+. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 789999999999999999999994 4557899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 018022 120 CSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (362)
Q Consensus 120 c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~ 170 (362)
|++... +|...+| +|+||+.+|++++++|
T Consensus 81 c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 988776 6666777 9999999999999875
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.83 E-value=5.7e-20 Score=186.54 Aligned_cols=267 Identities=17% Similarity=0.122 Sum_probs=214.7
Q ss_pred eEEEEeecC---CCCCCeEEEEEeeeecchhhhhhhhcCCCCCC-------CCccccccceEEEEEeCCCCCCCCCCCEE
Q 018022 29 LVIDEVIVD---PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-------FPRILGHEAIGVVESVGENVDGVVEGDVV 98 (362)
Q Consensus 29 l~l~~~~~p---~~~~~eVlVkv~~~~i~~~d~~~~~g~~~~~~-------~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 98 (362)
|+..+-|.. +..++.=+--|-|+.||.+|+.+..|+.++.. ....+|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 455554443 23566668899999999999999999876522 345788888876 5789999
Q ss_pred EeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc
Q 018022 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 178 (362)
Q Consensus 99 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~P~~l~~~~ 178 (362)
... --. -++++-+.++.+.+|.+|++-.+++
T Consensus 1499 M~m------------------------------vpA-------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGM------------------------------VPA-------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEe------------------------------eeh-------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 632 111 1788999999999999999999999
Q ss_pred hhccccchhhhHHHHHHhcCCCCCCEEEEEC-CChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcC
Q 018022 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNS 253 (362)
Q Consensus 179 aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~G-ag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~ 253 (362)
|+..++.+.|+|++++.+...++|+++||++ +|++|++|+.+|.+.|+ +|+.+..+.||++++.+ +..+++-|+
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 9999999999999999999999999999995 59999999999999999 99999999999998875 344667788
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeecc
Q 018022 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (362)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (362)
++ .+|.+.+..-+.| |+|+|++...... ++..++||+.+ ||+..+|...-.++-++-+.- +.||.+++|..+.
T Consensus 1609 Rd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMav-fLkNvsfHGiLLD 1682 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAV-FLKNVSFHGILLD 1682 (2376)
T ss_pred cc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhh-hhcccceeeeehh
Confidence 87 8999999999999 9999999998887 99999999997 999999976555555666554 4569999998776
Q ss_pred CCCc--cccHHHHHHHHH----cCCcccceecccC
Q 018022 333 GLKA--KSDIPILLKRYM----DKWSYVPFSGTRA 361 (362)
Q Consensus 333 ~~~~--~~~l~~~l~~~~----~g~l~~~~~~~~~ 361 (362)
+... -+++.++.++++ +|..+|-...+|.
T Consensus 1683 svmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~ 1717 (2376)
T KOG1202|consen 1683 SVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFH 1717 (2376)
T ss_pred hhhcCcHHHHHHHHHHHHhhhccCceecccccccc
Confidence 5432 244566666655 4666676666654
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.80 E-value=8.9e-19 Score=143.65 Aligned_cols=129 Identities=28% Similarity=0.490 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHH
Q 018022 212 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 290 (362)
Q Consensus 212 ~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~ 290 (362)
++|++++|+|+++|+ +|++++++++|+++++++|+++++++++ .++.+.+++++++ ++|+||||+|.+..++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999988 7899999999998 9999999999888899999
Q ss_pred HHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHHHHHHHHHc
Q 018022 291 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 349 (362)
Q Consensus 291 ~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~ 349 (362)
++++++ |+++++|.+. ....+++...++.+++++.|++.++ +++++++++++++
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999998 9999999965 5678999999999999999998765 6999999999863
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.40 E-value=4.6e-12 Score=125.28 Aligned_cols=152 Identities=19% Similarity=0.249 Sum_probs=113.9
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCC----------CccHHHHHH
Q 018022 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIII 266 (362)
Q Consensus 198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~----------~~~~~~~i~ 266 (362)
+..++++|+|+|+|++|+++++.|+.+|+ +|+++|.+++|++.++++|++.+ ++..+++ .+++.+..+
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35689999999999999999999999999 89999999999999999999854 6653310 013334433
Q ss_pred hh-cC--CCccEEEEcCCCH-----HHH-HHHHHHhccCCceEEEEccCCCC-CccccCHHHHHh-cCcEEEEeeccCCC
Q 018022 267 DM-TD--GGADYCFECVGLA-----SLV-QEAYACCRKGWGKTIVLGVDQPG-SQLSLSSFEVLH-SGKILMGSLFGGLK 335 (362)
Q Consensus 267 ~~-~~--~g~d~vid~~g~~-----~~~-~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~~~~~~~-~~~~i~g~~~~~~~ 335 (362)
+. .. +++|++|+|+|.+ ..+ ++.++.++++ |+++.+|...++ -..+++...++. +++++.|.+. +
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~- 315 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L- 315 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C-
Confidence 33 22 2799999999963 354 8999999998 999999985322 234555555665 8999999863 2
Q ss_pred ccccHH-HHHHHHHcCCcccc
Q 018022 336 AKSDIP-ILLKRYMDKWSYVP 355 (362)
Q Consensus 336 ~~~~l~-~~l~~~~~g~l~~~ 355 (362)
+..+. ++.+++.++.+++.
T Consensus 316 -P~~~p~~As~lla~~~i~l~ 335 (509)
T PRK09424 316 -PSRLPTQSSQLYGTNLVNLL 335 (509)
T ss_pred -chhHHHHHHHHHHhCCccHH
Confidence 23455 58888888877654
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.28 E-value=1.2e-10 Score=112.63 Aligned_cols=141 Identities=14% Similarity=0.160 Sum_probs=113.8
Q ss_pred HHHHHHhcCC-CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh
Q 018022 190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 190 ~~~l~~~~~~-~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~ 268 (362)
|.++.+..++ -+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|++.++++|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v--- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV--- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence 4445454443 689999999999999999999999999 89999999999999999998532 1 11222
Q ss_pred cCCCccEEEEcCCCHHHHHHH-HHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeccCCCccccHH--HHHH
Q 018022 269 TDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILLK 345 (362)
Q Consensus 269 ~~~g~d~vid~~g~~~~~~~~-~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~l~--~~l~ 345 (362)
.++|+||+|+|.+..+... ++.++++ |+++++|.. +.++++..+..+++++.+++.+.. ..+++ +.+.
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~ 326 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII 326 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence 2589999999999888765 9999997 999999953 467888889999999999865432 23566 7999
Q ss_pred HHHcCCc
Q 018022 346 RYMDKWS 352 (362)
Q Consensus 346 ~~~~g~l 352 (362)
++++|++
T Consensus 327 LLa~Grl 333 (413)
T cd00401 327 LLAEGRL 333 (413)
T ss_pred hhhCcCC
Confidence 9999998
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=98.55 E-value=1.7e-08 Score=82.09 Aligned_cols=98 Identities=19% Similarity=0.290 Sum_probs=60.8
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC--CHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc
Q 018022 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 322 (362)
Q Consensus 245 ~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 322 (362)
+|+++|+|+++ .++ ...+++|+|||++| ....+..++++| ++ |+++.+|. .+.......+
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 68999999987 665 22348999999999 655446777888 97 99999974 2222222222
Q ss_pred CcEEEEeeccCCC----ccccHHHHHHHHHcCCcccceeccc
Q 018022 323 GKILMGSLFGGLK----AKSDIPILLKRYMDKWSYVPFSGTR 360 (362)
Q Consensus 323 ~~~i~g~~~~~~~----~~~~l~~~l~~~~~g~l~~~~~~~~ 360 (362)
...+.+.++.... ..++++++++++++|+|+|+++++|
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f 104 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVF 104 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEE
Confidence 3333333332211 2356999999999999999999887
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.51 E-value=9.5e-07 Score=87.62 Aligned_cols=128 Identities=18% Similarity=0.223 Sum_probs=90.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCC----------CccHHHHHHhh
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIIIDM 268 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~----------~~~~~~~i~~~ 268 (362)
.++++|+|+|+|.+|++++++++.+|+ .|++++++.++++.++++|.+.+ ++..++. .+++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999998763 3321100 02333333333
Q ss_pred cC---CCccEEEEcC---CCHH---HHHHHHHHhccCCceEEEEccCCCCCccccC--HHHHH-hcCcEEEEee
Q 018022 269 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPGSQLSLS--SFEVL-HSGKILMGSL 330 (362)
Q Consensus 269 ~~---~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~--~~~~~-~~~~~i~g~~ 330 (362)
.. .++|++|+|+ |.+. ..++.++.|+++ +.|+.++...++ +++.. ...+. ..++++.|..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence 33 2799999999 5432 457889999998 999999875443 33332 11111 2247777764
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.40 E-value=5.2e-06 Score=80.87 Aligned_cols=102 Identities=22% Similarity=0.227 Sum_probs=80.1
Q ss_pred hHHHHHHhcCCC-CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHh
Q 018022 189 GVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 189 a~~~l~~~~~~~-~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~ 267 (362)
.|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.|...+...|+. ++ ++.+.+.
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal~- 266 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAAE- 266 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHHh-
Confidence 455554443554 89999999999999999999999999 999999999888777777764 22 1222221
Q ss_pred hcCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022 268 MTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 268 ~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~ 306 (362)
++|++|+++|....+. ..+..++++ +.++..|..
T Consensus 267 ----~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~ 301 (425)
T PRK05476 267 ----LGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHF 301 (425)
T ss_pred ----CCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCC
Confidence 5899999999988776 688899997 888898875
No 134
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.30 E-value=1.6e-05 Score=76.94 Aligned_cols=102 Identities=23% Similarity=0.278 Sum_probs=79.3
Q ss_pred hHHHHHHhcC-CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHh
Q 018022 189 GVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 189 a~~~l~~~~~-~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~ 267 (362)
.+.++.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|...+...|+. +++ ..+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal-- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA-- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH--
Confidence 3344444434 3689999999999999999999999999 899999888887777777763 221 22222
Q ss_pred hcCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022 268 MTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 268 ~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~G~~ 306 (362)
.+.|++|+++|....+. ..+..++++ +.++.+|..
T Consensus 249 ---~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 ---KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred ---hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 15799999999998776 488899997 899999874
No 135
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.30 E-value=3.9e-08 Score=96.38 Aligned_cols=159 Identities=18% Similarity=0.181 Sum_probs=107.6
Q ss_pred cccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccc
Q 018022 73 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVS 152 (362)
Q Consensus 73 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 152 (362)
.-|.|+++-+.+|+++.++ +|+..+.+ |++|..| ++.|..... .|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 4688999999999999876 66666777 9999999 666655554 3433334
Q ss_pred ccceeeeEEeecCceEE---c-CCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCE
Q 018022 153 VSSFSEYTVLDIAHVVK---V-DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 228 (362)
Q Consensus 153 ~g~~a~y~~v~~~~~~~---~-P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~ 228 (362)
.|++++.++. .+.. + +..++...+| .....+..+.-++++|+|+|+|.+|..+++.++..|+.+
T Consensus 139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 8888888765 3332 2 2223322221 111123334467899999999999999999999999769
Q ss_pred EEEEcCCchHHH-HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022 229 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 284 (362)
Q Consensus 229 vi~~~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~ 284 (362)
|++++++.++.+ +++++|.. .++. .++.+.+. ++|+||+|++.+.
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDvVi~aT~s~~ 252 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADIVISSTGAPH 252 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCEEEECCCCCC
Confidence 999999988855 66677754 2221 12223222 5999999999774
No 136
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.18 E-value=1.2e-05 Score=74.27 Aligned_cols=103 Identities=24% Similarity=0.380 Sum_probs=72.6
Q ss_pred hcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhcC
Q 018022 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.++++++||.+|+|. |..+.++++..+.. +|++++.+++.++.+++. +...+- ... .++. .+ .+.+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~---~d~~-~l-~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL---GEIE-AL-PVAD 144 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE---cchh-hC-CCCC
Confidence 35788999999999988 88888888887753 799999999999888763 433221 111 1111 11 1223
Q ss_pred CCccEEEEcC------CCHHHHHHHHHHhccCCceEEEEccC
Q 018022 271 GGADYCFECV------GLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 271 ~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+.||+|+... .....++.+++.|+++ |++++.+..
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~ 185 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVV 185 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEee
Confidence 3799998643 2346689999999998 999998764
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.15 E-value=3.2e-05 Score=75.70 Aligned_cols=101 Identities=18% Similarity=0.236 Sum_probs=80.1
Q ss_pred HHHHHHhcCC-CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh
Q 018022 190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 190 ~~~l~~~~~~-~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~ 268 (362)
+.++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+.. + .+.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v--------~leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L--------TLEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c--------cHHHHHh--
Confidence 4445455444 679999999999999999999999999 8999999888877777777652 2 1222332
Q ss_pred cCCCccEEEEcCCCHHHH-HHHHHHhccCCceEEEEccC
Q 018022 269 TDGGADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 269 ~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~ 306 (362)
..|++++++|....+ ...++.|+++ +.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 489999999988754 7899999997 999999974
No 138
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.12 E-value=5e-05 Score=71.07 Aligned_cols=111 Identities=18% Similarity=0.237 Sum_probs=83.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
.+.+++|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|...+ .. .++. +... .+|+||+++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~----~~l~-~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELA----EEVG-KIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHH----HHhC-CCCEEEECC
Confidence 68999999999999999999999999 99999999988888888886532 11 1222 2222 599999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 018022 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 328 (362)
+........++.++++ +.++.++..+++.+ + .....++++..+
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pggtd--~--~~a~~~Gv~~~~ 261 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGGTD--F--EYAEKRGIKALL 261 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCCcC--e--eehhhCCeEEEE
Confidence 8765456788899997 99999987655433 2 234445666664
No 139
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.10 E-value=1e-05 Score=76.24 Aligned_cols=109 Identities=20% Similarity=0.246 Sum_probs=80.1
Q ss_pred CceEEcCCCCCccchhccccchhhhHHHHHHhcCC---CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHH-H
Q 018022 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV---EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-E 240 (362)
Q Consensus 165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~---~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~-~ 240 (362)
..++++|+.+..+.++... +.++++.++...... -++.+|+|+|+|.+|..+++.++..|..+|++++++.+|. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 3577888888888887766 667777764332221 4789999999999999999999988877999999998875 6
Q ss_pred HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHH
Q 018022 241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 285 (362)
Q Consensus 241 ~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~ 285 (362)
+++++|.. +++. .++.+.+. .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~-----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL-----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH-----HHHHHHHh-----cCCEEEECCCCCch
Confidence 67788873 3322 12223322 48999999998864
No 140
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.03 E-value=1.5e-07 Score=92.41 Aligned_cols=161 Identities=18% Similarity=0.164 Sum_probs=97.3
Q ss_pred ccccccceEEEEEeCCCCCCCCCCCEEEeeCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccc
Q 018022 72 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFV 151 (362)
Q Consensus 72 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 151 (362)
..-|+|+++-+.+|+++.++.-+|+. .. |++|. ..+..|..... .|...+
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~-----qI-lgQvk----~a~~~a~~~g~---~g~~l~----------------- 139 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEP-----QI-LGQVK----DAYALAQEAGT---VGTILN----------------- 139 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCCh-----HH-HHHHH----HHHHHHHHcCC---chHHHH-----------------
Confidence 34699999999999999887555543 33 44433 22223322221 111111
Q ss_pred cccceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcC---CCCCCEEEEECCChHHHHHHHHHHHcCCCE
Q 018022 152 SVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGLGSIGLAVAEGARLCGATR 228 (362)
Q Consensus 152 ~~g~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~~G~~a~~la~~~g~~~ 228 (362)
+.|++.+.++ +.+..+.+.. ..+.+.++.++..... -.++.+|+|+|+|.+|.++++.++..|+++
T Consensus 140 --~lf~~a~~~~--------k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~ 208 (423)
T PRK00045 140 --RLFQKAFSVA--------KRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRK 208 (423)
T ss_pred --HHHHHHHHHH--------hhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCe
Confidence 1454444333 3332222222 2244555555432222 257899999999999999999999999889
Q ss_pred EEEEcCCchHHH-HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022 229 IIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 284 (362)
Q Consensus 229 vi~~~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~ 284 (362)
|++++++.++.+ +++++|.+ +++.. ++.+.+ . ++|+||+|+|.+.
T Consensus 209 V~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l----~-~aDvVI~aT~s~~ 254 (423)
T PRK00045 209 ITVANRTLERAEELAEEFGGE-AIPLD-----ELPEAL----A-EADIVISSTGAPH 254 (423)
T ss_pred EEEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHh----c-cCCEEEECCCCCC
Confidence 999999988865 66777754 33221 122222 1 5899999999764
No 141
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.95 E-value=0.00019 Score=65.61 Aligned_cols=129 Identities=22% Similarity=0.266 Sum_probs=83.9
Q ss_pred ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcC
Q 018022 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234 (362)
Q Consensus 155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~ 234 (362)
+|.+|.. +...++.+++++++..+. .+.... ....+. ..+.++++||-+|+|. |..++.+++ .|..+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4556644 667788899888776554 221111 111121 1256889999999987 877776554 57757999999
Q ss_pred CchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhcCC--CccEEEEcCCCH---HHHHHHHHHhccCCceEEEEcc
Q 018022 235 ISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 235 ~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~~--g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
++...+.+++. +....+. +..+ .||+|+...... ..++++.+.|+++ |++++.|.
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~---------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi 214 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVY---------------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGI 214 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEE---------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEEC
Confidence 99988877652 2211111 1111 489998766543 3456888999998 99999886
Q ss_pred C
Q 018022 306 D 306 (362)
Q Consensus 306 ~ 306 (362)
.
T Consensus 215 ~ 215 (250)
T PRK00517 215 L 215 (250)
T ss_pred c
Confidence 4
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.83 E-value=0.00022 Score=70.15 Aligned_cols=92 Identities=21% Similarity=0.255 Sum_probs=73.9
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
.-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. + ++.+.++ ..|+|+.
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell~-----~ADIVI~ 315 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVVE-----TADIFVT 315 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHHh-----cCCEEEE
Confidence 3478999999999999999999999999 8999988877775565566542 1 2333332 5899999
Q ss_pred cCCCHHHHH-HHHHHhccCCceEEEEccC
Q 018022 279 CVGLASLVQ-EAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 279 ~~g~~~~~~-~~~~~l~~~~G~iv~~G~~ 306 (362)
++|....+. ..+..|+++ +.++.+|..
T Consensus 316 atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 316 ATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred CCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 999888775 899999997 999999874
No 143
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.81 E-value=1.8e-05 Score=80.77 Aligned_cols=81 Identities=20% Similarity=0.253 Sum_probs=60.0
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC---------------------chHHHHHHhcCCcEEEcCCCC
Q 018022 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKNC 256 (362)
Q Consensus 198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~---------------------~~~~~~~~~~g~~~vv~~~~~ 256 (362)
..+.|++|+|+|+|++|+++++.++.+|+ +|++++.. +.+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888853 356777888998877764320
Q ss_pred CCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022 257 GDKSVSQIIIDMTDGGADYCFECVGLAS 284 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~ 284 (362)
.+.. .+.+ ..++|+||+++|...
T Consensus 212 ~~~~-~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDIT-LEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCC-HHHH----HhhCCEEEEeeCCCC
Confidence 0111 1222 126999999999763
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.78 E-value=0.00016 Score=69.77 Aligned_cols=99 Identities=20% Similarity=0.224 Sum_probs=70.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.. ++........+ .+++.+.+ . .+|++|++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l----~-~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV----K-RADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH----c-cCCEEEEc
Confidence 34569999999999999999999999 89999999888877654 55432222221 12222222 2 58999999
Q ss_pred CC---C--HH-HHHHHHHHhccCCceEEEEccCCC
Q 018022 280 VG---L--AS-LVQEAYACCRKGWGKTIVLGVDQP 308 (362)
Q Consensus 280 ~g---~--~~-~~~~~~~~l~~~~G~iv~~G~~~~ 308 (362)
++ . +. .....++.++++ +.++.++...+
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 83 2 22 136788889997 99999986543
No 145
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.76 E-value=0.00025 Score=66.01 Aligned_cols=110 Identities=17% Similarity=0.206 Sum_probs=79.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
.|.+++|+|.|.+|.+++..++.+|+ +|++.+++.++.+.+.++|... +.. .++.+.+ . .+|+||+++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~~~l----~-~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----NKLEEKV----A-EIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----HHHHHHh----c-cCCEEEECC
Confidence 47899999999999999999999999 9999999988887777777542 211 1222222 2 599999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 018022 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 327 (362)
+....-...++.++++ ..++.++..++.. ++.....+++...
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~Pg~t----df~~Ak~~G~~a~ 259 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKPGGT----DFEYAKKRGIKAL 259 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCCCCC----CHHHHHHCCCEEE
Confidence 8664335677888987 8888898754433 3344555566655
No 146
>PRK08324 short chain dehydrogenase; Validated
Probab=97.73 E-value=0.00031 Score=73.44 Aligned_cols=137 Identities=19% Similarity=0.256 Sum_probs=87.8
Q ss_pred ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc
Q 018022 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (362)
Q Consensus 155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~ 233 (362)
++.+|..+++..++.+ +..+.+++.+... ...+.-+|+++||+|+ |++|++.++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5677888877766666 5555555542110 0122346789999997 9999999999999999 999999
Q ss_pred CCchHHHHHHh-cCC---cE--EEcCCCCCCccHHHHHHhhc--CCCccEEEEcCCC-----------------------
Q 018022 234 VISEKFEIGKR-FGV---TE--FVNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL----------------------- 282 (362)
Q Consensus 234 ~~~~~~~~~~~-~g~---~~--vv~~~~~~~~~~~~~i~~~~--~~g~d~vid~~g~----------------------- 282 (362)
++.++++.+.+ ++. .. ..|-.+ ...+.+.+.+.. .+++|++|++.|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887765443 432 11 223322 133333333332 2379999999983
Q ss_pred --HHHHHHHHHHhcc---CCceEEEEccC
Q 018022 283 --ASLVQEAYACCRK---GWGKTIVLGVD 306 (362)
Q Consensus 283 --~~~~~~~~~~l~~---~~G~iv~~G~~ 306 (362)
...++.+++.+++ + |++++++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1224455666666 5 789999864
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.67 E-value=0.00044 Score=60.58 Aligned_cols=118 Identities=19% Similarity=0.260 Sum_probs=83.6
Q ss_pred CCCccchhccccchhhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHhcCCc
Q 018022 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVT 248 (362)
Q Consensus 173 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~g~~ 248 (362)
.++....-.+.-+...|. +.+...++++++||=+|+|. |..++-+|+..+ +|+.+++.++=.+. ++.+|..
T Consensus 46 ~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~ 120 (209)
T COG2518 46 ALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYE 120 (209)
T ss_pred cccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCC
Confidence 344444444444555554 45788999999999999876 999999999988 99999998874443 4567875
Q ss_pred EEEcCCCCCCccHHHHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022 249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 249 ~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
.|.....++.. .+... .||.|+-+.+.+..-..+++.|+++ |+++.-
T Consensus 121 nV~v~~gDG~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 121 NVTVRHGDGSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred ceEEEECCccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 43322221111 22333 7999999999887557899999998 998865
No 148
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.54 E-value=0.00039 Score=64.85 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=65.3
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcE-EEcCCCCCCccHHHHHHhhcCCCc
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
..++++||-+|+|. |..++.+++ .|..+|++++.++...+.+++. +... +..... + ......++|
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 45789999999988 777776665 5666999999999887777652 2211 111111 1 111223379
Q ss_pred cEEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 018022 274 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 274 d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
|+|+...... ..+..+.+.|+++ |.+++.|..
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 9999865443 3456788999998 999988763
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.47 E-value=0.00056 Score=56.27 Aligned_cols=96 Identities=24% Similarity=0.240 Sum_probs=63.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc--EEEcCCCCCCccHHHHHHhhcCCCccEE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYC 276 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~v 276 (362)
-.+.+++|+|+|++|.+++..+...|+++|+++.|+.+|.+.+. +++.. .++..++ +.+.+. .+|++
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Div 79 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADIV 79 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCeE
Confidence 35889999999999999999999999988999999999877654 46332 3444433 222222 59999
Q ss_pred EEcCCCHHH--HHHHHHHhccCCceEEEEcc
Q 018022 277 FECVGLASL--VQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 277 id~~g~~~~--~~~~~~~l~~~~G~iv~~G~ 305 (362)
|.|++.+.. ....+....+..+.++.++.
T Consensus 80 I~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 80 INATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp EE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred EEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 999997632 12333333221036677765
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.40 E-value=0.00086 Score=59.90 Aligned_cols=79 Identities=22% Similarity=0.289 Sum_probs=60.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCC----cEEEcCCCCCCccHHHHHHhhcCC--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV----TEFVNSKNCGDKSVSQIIIDMTDG--G 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~----~~vv~~~~~~~~~~~~~i~~~~~~--g 272 (362)
.++.++|+|| +++|.+.++.....|+ +|+.+.|..+|++.+. +++. ...+|-.+ .+.+...+..+... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 3478899999 9999999999999999 9999999999998765 5772 22444333 23445556555554 6
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|+.++..|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999885
No 151
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0029 Score=58.18 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=55.2
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhcC--CCccEEEE
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCFE 278 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g~d~vid 278 (362)
.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+...+...+ .|..+ .+.+.+.+.+... +++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 37899998 9999999999999999 99999998888777766665433 34333 2333344433322 37999999
Q ss_pred cCCC
Q 018022 279 CVGL 282 (362)
Q Consensus 279 ~~g~ 282 (362)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.38 E-value=0.0028 Score=56.82 Aligned_cols=104 Identities=21% Similarity=0.215 Sum_probs=67.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-Hhc---CCcEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~---g~~~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+..+-.+.+.+.+.+.+... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999999999999999 999999988877655 222 2223332221012233333333221 268
Q ss_pred cEEEEcCCCH-----------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 274 DYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 274 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
|.++.+.|.. ..++...+.++++ |++++++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 9999988742 1244556667776 899998864
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.004 Score=57.47 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=69.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhh---cCCCccE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDM---TDGGADY 275 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~---~~~g~d~ 275 (362)
.+.++||+|+ |++|.+.++.+...|+ +|++++++.++++.+.+.+...+ .|-.+ .+++.+.+.+. .++.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 4578999998 9999999999888999 99999999988887777665433 23332 22333333332 3347999
Q ss_pred EEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022 276 CFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD 306 (362)
Q Consensus 276 vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~ 306 (362)
+|.+.|.. ...+.++..++.. .|+|++++..
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~ 136 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSI 136 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECCh
Confidence 99987732 0133455666542 2789988754
No 154
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.31 E-value=0.0028 Score=53.40 Aligned_cols=104 Identities=17% Similarity=0.249 Sum_probs=70.2
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
.-.|.+++|.|-|.+|...++.++.+|+ +|++++.++-+.-.+..-|+.. . .+.+.+. ..|++|.
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~--------~~~~a~~-----~adi~vt 84 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-M--------TLEEALR-----DADIFVT 84 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E---------HHHHTT-----T-SEEEE
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-c--------CHHHHHh-----hCCEEEE
Confidence 4578899999999999999999999999 9999999998877777777642 1 2222222 4899999
Q ss_pred cCCCHHHH-HHHHHHhccCCceEEEEccCCCCCccccCHHHHHhc
Q 018022 279 CVGLASLV-QEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 322 (362)
Q Consensus 279 ~~g~~~~~-~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 322 (362)
++|....+ .+-+..|+++ ..+..+|. .+.++++..+...
T Consensus 85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh----~d~Eid~~~L~~~ 124 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDG-AILANAGH----FDVEIDVDALEAN 124 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TT-EEEEESSS----STTSBTHHHHHTC
T ss_pred CCCCccccCHHHHHHhcCC-eEEeccCc----CceeEeecccccc
Confidence 99988744 4788889996 55555554 3557777666554
No 155
>PRK06182 short chain dehydrogenase; Validated
Probab=97.31 E-value=0.003 Score=58.06 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=55.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhc--CCCccEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMT--DGGADYC 276 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~--~~g~d~v 276 (362)
.+.+++|+|+ |.+|.+.++.+...|+ +|++++++.++++.+...+...+ .|-.+ .+++.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 3578999998 9999999999988999 99999999888776655554332 23322 233434444332 2379999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999984
No 156
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.27 E-value=0.0076 Score=55.11 Aligned_cols=81 Identities=23% Similarity=0.313 Sum_probs=56.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCc-EEEcCCCCCCccHHHHHH-hhc-C
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFVNSKNCGDKSVSQIII-DMT-D 270 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~-~vv~~~~~~~~~~~~~i~-~~~-~ 270 (362)
..+.++||+|| +++|...+..+...|+ .++.+.|+.+|++.+.+ + +.. +++.-+= .+.+-.+.+. ++. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHhc
Confidence 46789999999 9999999999999999 99999999999877643 2 322 2332211 1123333333 332 2
Q ss_pred C-CccEEEEcCCC
Q 018022 271 G-GADYCFECVGL 282 (362)
Q Consensus 271 ~-g~d~vid~~g~ 282 (362)
+ .+|+.|++.|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 2 79999999995
No 157
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.25 E-value=0.0039 Score=53.59 Aligned_cols=102 Identities=22% Similarity=0.329 Sum_probs=73.4
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE--EEcCCCCCCccHHHHHHh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~--vv~~~~~~~~~~~~~i~~ 267 (362)
.....+++|+.++=+|+|. |..++++++.....+||++++++++++..+ +||.+. ++.-+. .+.+.+
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A------p~~L~~ 99 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA------PEALPD 99 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc------hHhhcC
Confidence 3567889999888889865 666777775554459999999999988764 588764 443322 333333
Q ss_pred hcCCCccEEEEcCCCH--HHHHHHHHHhccCCceEEEEcc
Q 018022 268 MTDGGADYCFECVGLA--SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 268 ~~~~g~d~vid~~g~~--~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
+. .+|.+|---|.. ..++.++..|+++ |++|.-..
T Consensus 100 ~~--~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 100 LP--SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred CC--CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 22 599999866643 5578899999998 99997765
No 158
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.22 E-value=0.0027 Score=55.44 Aligned_cols=113 Identities=19% Similarity=0.179 Sum_probs=76.5
Q ss_pred CCCCEEEEECC--ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCC-CCCccHHHHHHhhcCCCcc
Q 018022 200 EVGSTVVIFGL--GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKN-CGDKSVSQIIIDMTDGGAD 274 (362)
Q Consensus 200 ~~g~~vlI~Ga--g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~-~~~~~~~~~i~~~~~~g~d 274 (362)
.....|||+|+ |++|.+.+.=....|+ .|+++.|.-++..-+. ++|.. .=+|-.+ +.--.+...+++...|+.|
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 34568999975 9999999988889999 9999999999887766 78853 3334332 0112244455666677899
Q ss_pred EEEEcCCCH----------HHHH----------------HHHHHhccCCceEEEEccCCCCCcccc
Q 018022 275 YCFECVGLA----------SLVQ----------------EAYACCRKGWGKTIVLGVDQPGSQLSL 314 (362)
Q Consensus 275 ~vid~~g~~----------~~~~----------------~~~~~l~~~~G~iv~~G~~~~~~~~~~ 314 (362)
+.++..|.+ ..++ -....++.. |+|+.+|...+..+.++
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence 999987764 1111 123456775 99999997654443333
No 159
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.15 E-value=0.0055 Score=53.79 Aligned_cols=102 Identities=21% Similarity=0.410 Sum_probs=70.7
Q ss_pred HhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----hcCC-cEEEcCCCCCCccHHHHHHhh
Q 018022 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGV-TEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~g~-~~vv~~~~~~~~~~~~~i~~~ 268 (362)
...++.++++||-+|+|. |..++.+++..+. .+|++++.+++.++.++ .++. +.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 456889999999999988 8888899887643 38999999998887664 3562 3222111 1222223222
Q ss_pred cCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 018022 269 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 269 ~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 303 (362)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999986553 34577888999998 999864
No 160
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.13 E-value=0.006 Score=56.23 Aligned_cols=113 Identities=22% Similarity=0.280 Sum_probs=73.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhc--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--D 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~ 270 (362)
.+.+|+|+|| +++|.+.+.-...+|+ +++.+.+..++++.+ ++.+..+ ++ .-+-.+.++..+.+.+.. -
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999 9999998888888898 777777777776665 3444433 22 111101233444443332 2
Q ss_pred CCccEEEEcCCCH-------------------------HHHHHHHHHhccCC-ceEEEEccCCCCCcccc
Q 018022 271 GGADYCFECVGLA-------------------------SLVQEAYACCRKGW-GKTIVLGVDQPGSQLSL 314 (362)
Q Consensus 271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~iv~~G~~~~~~~~~~ 314 (362)
|++|+.++..|.. .....++..|++.+ |+|+.++...+...++.
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 3799999988853 24567788888876 89999987655555544
No 161
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.08 E-value=0.0044 Score=53.51 Aligned_cols=90 Identities=31% Similarity=0.383 Sum_probs=65.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
-.|.+|.|+|.|.+|...++.++..|. +|++.+++..........+... .++.+.+.+ .|+|+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~~-----aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLAQ-----ADIVSLH 98 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHHH------SEEEE-
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcch-----hhhhhhh
Confidence 358999999999999999999999999 9999999888776555555422 234444443 7899988
Q ss_pred CCCH----HHH-HHHHHHhccCCceEEEEcc
Q 018022 280 VGLA----SLV-QEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 280 ~g~~----~~~-~~~~~~l~~~~G~iv~~G~ 305 (362)
.+.. ..+ ...+..|+++ ..++.++.
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccc
Confidence 7742 112 4678888987 88888875
No 162
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.06 E-value=0.0066 Score=57.38 Aligned_cols=102 Identities=22% Similarity=0.322 Sum_probs=72.7
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~ 268 (362)
.+...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+.+.
T Consensus 73 l~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~~ 147 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPEF 147 (322)
T ss_pred HHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccccc
Confidence 4566788999999999974 9999999998764 27999999998776654 35665433222 1222222111
Q ss_pred cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022 269 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 269 ~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
+.+|+|+.+.+........++.++++ |+++..
T Consensus 148 --~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 148 --APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred --CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 26999999988777566889999997 998763
No 163
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.03 E-value=0.043 Score=51.31 Aligned_cols=138 Identities=10% Similarity=0.091 Sum_probs=88.8
Q ss_pred ceeeeEEeecCceEEcCCCCCccchhccccchhhhHHHHHHhcC---CCCCCEEEEECC-ChHHHHHHHHHH-HcCCCEE
Q 018022 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI 229 (362)
Q Consensus 155 ~~a~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~vlI~Ga-g~~G~~a~~la~-~~g~~~v 229 (362)
.|-+|.++..+.... +.....++.+-+ .+.|.|. +.+-.. .-..+.|+|..| +.+++.++..++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~--~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD--PEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC--cchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 456666665544331 112222333333 5667765 322222 233466777777 889998888888 5555599
Q ss_pred EEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 230 IGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 230 i~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
|++++ .......+++|. ++|+.|++ |.++.....-+++|..|+..+..++...++..--..+.+|..
T Consensus 166 vglTS-~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 166 VGLTS-ARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred EEEec-CcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 99985 555568889996 88888766 223322357899999999998888888888852346677764
No 164
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.01 Score=56.47 Aligned_cols=79 Identities=27% Similarity=0.354 Sum_probs=53.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhc--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--D 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~ 270 (362)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++++.+ ++.|.+. ++ |-.+ .+++.+.+.+.. .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 4679999998 9999999999999999 899999998887543 3345432 22 3222 122222222221 2
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 379999999984
No 165
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.98 E-value=0.006 Score=59.25 Aligned_cols=107 Identities=18% Similarity=0.251 Sum_probs=73.5
Q ss_pred hhhHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHH
Q 018022 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 266 (362)
Q Consensus 187 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~ 266 (362)
...+..+.+..+++++++||-+|+|. |..+..+++..|+ +|++++.+++.++.+++.....-+.... .++.
T Consensus 153 ~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~~---- 223 (383)
T PRK11705 153 EAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDYR---- 223 (383)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cchh----
Confidence 33444456778899999999999864 7777888888888 9999999999999887643211111111 1221
Q ss_pred hhcCCCccEEEEc-----CCC---HHHHHHHHHHhccCCceEEEEc
Q 018022 267 DMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 267 ~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~G 304 (362)
++ .+.||.|+.. +|. ...++.+.+.|+++ |++++..
T Consensus 224 ~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 12 2469988743 343 24578889999998 9988753
No 166
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.94 E-value=0.0046 Score=53.78 Aligned_cols=77 Identities=21% Similarity=0.253 Sum_probs=57.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC---cEEEcCCCCCCcc----HHHHHHhhcCCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV---TEFVNSKNCGDKS----VSQIIIDMTDGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~---~~vv~~~~~~~~~----~~~~i~~~~~~g 272 (362)
.|-+|||+|+ +++|++.++-....|= +||++.|++++++.++.... ..|.|-.+ .+ +.+.+.+-.+ .
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P-~ 78 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP-N 78 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC-c
Confidence 4679999975 9999999999999998 99999999999999987543 34555443 33 3333332211 6
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
.+++|++.|-
T Consensus 79 lNvliNNAGI 88 (245)
T COG3967 79 LNVLINNAGI 88 (245)
T ss_pred hheeeecccc
Confidence 8999998885
No 167
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.013 Score=55.72 Aligned_cols=103 Identities=19% Similarity=0.147 Sum_probs=66.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.+++|+|+ |++|.+.++.+...|+ +|+++++++++++.+. ..|... . .|-.+ .+++.+.+.+...
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999998 9999999999999999 8999999887765432 334432 2 23222 2333333333221
Q ss_pred CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022 271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD 306 (362)
Q Consensus 271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~ 306 (362)
+++|++|++.|.. ...+.++..+++. .|+++.++..
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~ 145 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA 145 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence 3699999998842 0123455566542 2889998764
No 168
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.014 Score=54.41 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=54.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCC--cE-E--EcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--TE-F--VNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~--~~-v--v~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|+ |++|++.++.+...|+ +|++++++.++++.+ +.++. .. . .|-.+ .+++.+.+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 899999988877654 34442 11 1 23222 1233333333321 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
++|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 169
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.016 Score=53.15 Aligned_cols=78 Identities=23% Similarity=0.233 Sum_probs=53.0
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEE--cCCCCCCccHHHHHHhhcC--CCccE
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD--GGADY 275 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv--~~~~~~~~~~~~~i~~~~~--~g~d~ 275 (362)
+.++||+|+ |++|...++.+...|+ +|+++++++++++.+ +.++..+++ |-.+ .+++.+.+.+... +++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 578999998 9999999998888999 899999988877654 334422222 3322 2333333333321 37999
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999884
No 170
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.89 E-value=0.025 Score=48.51 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=64.5
Q ss_pred EEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC-
Q 018022 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL- 282 (362)
Q Consensus 205 vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~- 282 (362)
|+|+|+ |.+|...++.+...|+ +|+++.|++++.+. ..+++. +..+- .+. +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999998877 444443 33222 222 33333333 69999999984
Q ss_pred ---HHHHHHHHHHhccCCc--eEEEEccC
Q 018022 283 ---ASLVQEAYACCRKGWG--KTIVLGVD 306 (362)
Q Consensus 283 ---~~~~~~~~~~l~~~~G--~iv~~G~~ 306 (362)
......+++.++.. | +++.++..
T Consensus 72 ~~~~~~~~~~~~a~~~~-~~~~~v~~s~~ 99 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKA-GVKRVVYLSSA 99 (183)
T ss_dssp TTHHHHHHHHHHHHHHT-TSSEEEEEEET
T ss_pred ccccccccccccccccc-ccccceeeecc
Confidence 23355666666554 4 77777654
No 171
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.87 E-value=0.015 Score=58.81 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=68.1
Q ss_pred HhcCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--------CC-----cEEEcCCCCCCc
Q 018022 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--------GV-----TEFVNSKNCGDK 259 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--------g~-----~~vv~~~~~~~~ 259 (362)
...+.+.|.++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+ + |. ..++.-+- .
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL---t 148 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL---E 148 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC---C
Confidence 4566778999999998 9999999999999999 99999999887754322 1 21 12222111 1
Q ss_pred cHHHHHHhhcCCCccEEEEcCCCHH---------------HHHHHHHHhccC-CceEEEEccC
Q 018022 260 SVSQIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRKG-WGKTIVLGVD 306 (362)
Q Consensus 260 ~~~~~i~~~~~~g~d~vid~~g~~~---------------~~~~~~~~l~~~-~G~iv~~G~~ 306 (362)
+ .+.+.+..+ ++|+||.++|... ....+++.+... .++||+++..
T Consensus 149 D-~esI~~aLg-giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi 209 (576)
T PLN03209 149 K-PDQIGPALG-NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL 209 (576)
T ss_pred C-HHHHHHHhc-CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence 1 223333333 6999999988531 123344444432 2689988764
No 172
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.016 Score=51.83 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcC---CcEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VTEFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g---~~~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+ +.+. .-+++..+-.+..++.+.+.++.. +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999998 9999999988888899 899999988776544 3332 112222111012334444444321 269
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998874
No 173
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.018 Score=52.57 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=53.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.+++|+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ ++++.. .++ |-.+ .+++.+.+.+... +.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999999999999999 999999988765544 344432 122 3222 2333333333321 368
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999999874
No 174
>PRK12742 oxidoreductase; Provisional
Probab=96.83 E-value=0.028 Score=50.21 Aligned_cols=100 Identities=23% Similarity=0.280 Sum_probs=62.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH-HhcCCcEE-EcCCCCCCccHHHHHHhhcCCCccEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC 276 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~~g~~~v-v~~~~~~~~~~~~~i~~~~~~g~d~v 276 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+.+ +.++.+.+ .+++...+ .|..+ .+.+.+.+.+. +++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRKS--GALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHHh--CCCcEE
Confidence 4679999998 9999999999999999 7776654 44444433 44555432 22222 12233333321 369999
Q ss_pred EEcCCCHH-------------------------HHHHHHHHhccCCceEEEEccC
Q 018022 277 FECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 277 id~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
|.+.|... ....+...++.+ |++++++..
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~ 133 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV 133 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence 99987520 113444556676 899988764
No 175
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.019 Score=52.96 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=50.2
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHH---HH-HhcCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFE---IG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~---~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|+ + ++|.+.++.+...|+ +|+.++++++..+ .+ +++|....+..+-.+.+++.+.+.+... +
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4678999998 4 899999999999999 8888887653322 22 3345333222211012233333333322 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
.+|++|++.|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 79999999883
No 176
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.79 E-value=0.023 Score=51.17 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC--C-cEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--V-TEFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g--~-~~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+. .+. . ..++..+-.+.+++...+.+... +.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3568999998 9999999999888999 7999999987765543 222 1 11222111012333333333311 268
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999885
No 177
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.78 E-value=0.022 Score=49.41 Aligned_cols=102 Identities=19% Similarity=0.161 Sum_probs=65.3
Q ss_pred hcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE-EcCCCCCCccHHHHHHhhcCC-Cc
Q 018022 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-GA 273 (362)
Q Consensus 196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~~-g~ 273 (362)
...+++|++||.+|+|+-+.......+..+..+|++++.++.+ ...++..+ .+..+ .+..+.+.+..+. ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence 4557899999999998755544444444344489999998754 11233321 13222 3444555555555 89
Q ss_pred cEEEEc-----CCC------------HHHHHHHHHHhccCCceEEEEcc
Q 018022 274 DYCFEC-----VGL------------ASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 274 d~vid~-----~g~------------~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
|+|+.. .|. ...+..+.+.|+++ |++++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~ 147 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVF 147 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence 999952 222 34577889999998 99998654
No 178
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.038 Score=50.59 Aligned_cols=103 Identities=17% Similarity=0.273 Sum_probs=66.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~-~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
.+.++||+|+ +++|++.++.+...|+ +|++++++.++++.+.+ + +.. ..+ |-.+ .+++.+.+.+...
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4678999998 9999999999999999 89999998877655432 2 322 122 3222 2333333333321
Q ss_pred CCccEEEEcCCCH-------------------------HHHHHHHHHhccC-CceEEEEccC
Q 018022 271 GGADYCFECVGLA-------------------------SLVQEAYACCRKG-WGKTIVLGVD 306 (362)
Q Consensus 271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~-~G~iv~~G~~ 306 (362)
+++|+++.+.|.. ...+.++..|+.. +|+|++++..
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~ 145 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV 145 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 3799999998852 1134556666432 3799988764
No 179
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.025 Score=50.89 Aligned_cols=101 Identities=18% Similarity=0.194 Sum_probs=62.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~----~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
.+.++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+.+ +..+.. ..+ |..+ .+++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4678999998 9999999999888999 8888877653 33322 222322 122 3222 2333333333322
Q ss_pred -CCccEEEEcCCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 018022 271 -GGADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 271 -~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
+++|++|.+.|.. ..++.+.+.+..+ |++++++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689999887642 2345566666665 89998865
No 180
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0096 Score=53.02 Aligned_cols=77 Identities=14% Similarity=0.177 Sum_probs=52.8
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE--cCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
.+++|+|+ |.+|.+.+..+...|+ +|++++++.++.+.+++++-..++ |-.+ .+++.+.+..+..+++|++|.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence 46899998 9999999988888999 999999988777666554322222 2222 2333344444433479999998
Q ss_pred CCC
Q 018022 280 VGL 282 (362)
Q Consensus 280 ~g~ 282 (362)
.|.
T Consensus 79 ag~ 81 (225)
T PRK08177 79 AGI 81 (225)
T ss_pred Ccc
Confidence 764
No 181
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.74 E-value=0.0031 Score=55.91 Aligned_cols=103 Identities=21% Similarity=0.326 Sum_probs=69.1
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHH----hcCCcE--EEcCCCCCCccHHHHH
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQII 265 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~----~~g~~~--vv~~~~~~~~~~~~~i 265 (362)
+.+.+.+++|++||-+|+|. |+.++.+++..|.. +|+.++.+++-.+.++ .++.+. ++..+. ...+
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg------~~g~ 136 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG------SEGW 136 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G------GGTT
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch------hhcc
Confidence 45778899999999999876 88888888887743 7999998887665554 456543 232221 1111
Q ss_pred HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEE-Ecc
Q 018022 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV-LGV 305 (362)
Q Consensus 266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~-~G~ 305 (362)
. ..++||.|+-+.+.+..-...++.|+++ |+++. ++.
T Consensus 137 ~--~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~ 174 (209)
T PF01135_consen 137 P--EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ 174 (209)
T ss_dssp G--GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred c--cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence 1 1127999999988877557899999998 99987 453
No 182
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.026 Score=50.74 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
++.+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+. ..+.. .++ |-.+ .+.+.+.+.+...
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4688999998 9999999999999999 8999988877655432 22322 222 3222 1222222222211
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 379999999985
No 183
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.69 E-value=0.02 Score=55.18 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=69.4
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC---C-cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---V-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g---~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
.+|||+|+|.+|+.+++.+.+.+-.+|++.+++.++...+.... . ...+|-.+ .+++.++.. ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d------~~al~~li~-~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD------VDALVALIK-DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC------hHHHHHHHh-cCCEEEE
Confidence 47899999999999999999888459999999999888876653 2 23455444 233333332 3699999
Q ss_pred cCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 279 CVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+.+.....+.+-.+++.+ =.++....+
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 999887665555667765 566666654
No 184
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.69 E-value=0.028 Score=51.28 Aligned_cols=104 Identities=15% Similarity=0.242 Sum_probs=63.9
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHcCCCEEEEEcCCchHH---HHH-HhcCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKF---EIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Gag---~~G~~a~~la~~~g~~~vi~~~~~~~~~---~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|++ ++|.+.++.+...|+ +|+.++++++.. +.+ ++++...++.-+-.+.+++.+.+.+... +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 46899999873 899999999888999 888888875432 222 2334323332221112333333333321 3
Q ss_pred CccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 272 GADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 272 g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.+|++|.+.|.. ...+.++..|+.+ |+|++++..
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~ 150 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYY 150 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEecc
Confidence 789999988731 0134466677776 899888653
No 185
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.66 E-value=0.034 Score=51.34 Aligned_cols=102 Identities=17% Similarity=0.229 Sum_probs=65.3
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCch---HHHHH-HhcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 018022 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~---~~~~~-~~~g~~~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
.+.++||+|+ +++|++.++.+...|+ +|+.++++++ +++.+ ++++....+ |-.+ .+.+.+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 3678999987 4899999999989999 8888888743 33322 344533322 3222 2333333333322
Q ss_pred -CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 271 -GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 271 -~g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+.+|++|.+.|.. ...+..+..|..+ |+|++++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 3799999998841 1234566677786 999988754
No 186
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.66 E-value=0.038 Score=43.85 Aligned_cols=102 Identities=22% Similarity=0.332 Sum_probs=69.5
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~ 267 (362)
.....+.++++|+-+|+|. |..+..+++..+..++++++.++...+.+++ ++... ++..+. ... +..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~ 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LED 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chh
Confidence 4556777888999999977 8888888888754599999999988877643 44432 232221 110 111
Q ss_pred hcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEc
Q 018022 268 MTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 268 ~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G 304 (362)
..+.+|+|+...+.. ..++.+.+.|+++ |++++..
T Consensus 85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred -hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 112799999765432 4578899999997 9988753
No 187
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.65 E-value=0.0068 Score=47.51 Aligned_cols=92 Identities=26% Similarity=0.355 Sum_probs=62.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHhc----CC-cE--EEcCCCCCCccHHHHHHhhcCCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRF----GV-TE--FVNSKNCGDKSVSQIIIDMTDGG 272 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~----g~-~~--vv~~~~~~~~~~~~~i~~~~~~g 272 (362)
|+.+||-+|+|. |..+..+++. .+. +|++++.+++-++.+++. +. +. ++. .++ .... ...++
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~------~d~-~~~~-~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ------GDA-EFDP-DFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE------SCC-HGGT-TTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE------Ccc-ccCc-ccCCC
Confidence 678999999876 7778888884 666 999999999988887652 22 21 222 122 1111 11227
Q ss_pred ccEEEEcC-CCH---------HHHHHHHHHhccCCceEEEE
Q 018022 273 ADYCFECV-GLA---------SLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 273 ~d~vid~~-g~~---------~~~~~~~~~l~~~~G~iv~~ 303 (362)
||+|+... ... ..++.+.+.|+++ |++++-
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99999977 221 2378899999997 998763
No 188
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.043 Score=50.17 Aligned_cols=78 Identities=22% Similarity=0.280 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
++.++||+|+ |.+|...++.+...|+ +|+++++++++++.+. +.+.. .++ |-.+ ..++.+.+.+...
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999989999 8999998877654332 22322 222 3222 2334444444322
Q ss_pred CCccEEEEcCC
Q 018022 271 GGADYCFECVG 281 (362)
Q Consensus 271 ~g~d~vid~~g 281 (362)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 26899998876
No 189
>PRK08017 oxidoreductase; Provisional
Probab=96.62 E-value=0.0082 Score=54.36 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=55.1
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHH---HHHhhcCCCccEEE
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQ---IIIDMTDGGADYCF 277 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~---~i~~~~~~g~d~vi 277 (362)
+++||+|+ |.+|.+.++.+...|+ +|++++++.++++.+++.++..+. |..+ ...+.+ .+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 47999998 9999999999999999 899999999988888777765432 3322 122222 33332334789999
Q ss_pred EcCCC
Q 018022 278 ECVGL 282 (362)
Q Consensus 278 d~~g~ 282 (362)
.+.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 88774
No 190
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.034 Score=51.23 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=53.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc--EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFV--NSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~--~vv--~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|++++++.++++.+.+.... ..+ |-.+ .+.+.+.+.+... +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3578999998 9999999999888999 899999988887666543221 122 3222 1233333333222 268
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999886
No 191
>PRK04148 hypothetical protein; Provisional
Probab=96.60 E-value=0.014 Score=47.72 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=62.5
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (362)
Q Consensus 198 ~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi 277 (362)
....+.+++++|.| .|...++.+..+|. .|+++|.+++..+.+++.+.+.+.+.-- +.++ .+ .+++|.+.
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~liy 82 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLIY 82 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEEE
Confidence 33456889999999 88766666668899 9999999999999999888766554322 1121 11 12689999
Q ss_pred EcCCCHHHHHHHHHHhccC
Q 018022 278 ECVGLASLVQEAYACCRKG 296 (362)
Q Consensus 278 d~~g~~~~~~~~~~~l~~~ 296 (362)
.+=..+.....+++.-+.-
T Consensus 83 sirpp~el~~~~~~la~~~ 101 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKI 101 (134)
T ss_pred EeCCCHHHHHHHHHHHHHc
Confidence 9888887444555554443
No 192
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.60 E-value=0.031 Score=50.79 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=63.9
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc--EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Gag---~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~--~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.+++|+|++ ++|.+.++.+...|+ +|+.++++++..+.++++... ..+.-+-.+.++..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57889999874 899999999989999 899888875444444444221 1221111012333333333321 369
Q ss_pred cEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 274 DYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 274 d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
|++|.+.|.. ...+.++..++.+ |+++.++..
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~-g~Iv~iss~ 145 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG-ASIVTLTYF 145 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC-ceEEEEecc
Confidence 9999988731 1123445667776 899888754
No 193
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.036 Score=49.30 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHhcCCcEE-EcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~g~~~v-v~~~~~~~~~~~~~i~~~~~--~g 272 (362)
++.++||+|+ |.+|..+++.+...|+ +|++++++.++.+. ++..+...+ .|..+ .+++.+.+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 3679999998 9999999999988899 89999997765432 222333221 22222 2333333333221 27
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998874
No 194
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.54 E-value=0.021 Score=50.40 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=68.8
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHH
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI 264 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~ 264 (362)
+.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++-.+.+++ .+.. .++..+. .+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence 34667788999999999866 777777777664 2389999999887666553 4432 2333221 111
Q ss_pred HHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022 265 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 265 i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
+. ..+.||+|+-+.......+.+.+.|+++ |++++.
T Consensus 137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 11 1137999998877666567888999998 998764
No 195
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.047 Score=49.61 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----g~~-~vv--~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++ +.. .++ |-.+ ++++.+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4678999998 9999999999999999 8999998887765443 22 211 122 2222 2333343333321
Q ss_pred --CCccEEEEcCCC
Q 018022 271 --GGADYCFECVGL 282 (362)
Q Consensus 271 --~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 369999999884
No 196
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.059 Score=49.08 Aligned_cols=79 Identities=22% Similarity=0.260 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcE--E--EcCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE--F--VNSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~--v--v~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.+++|+|+ +++|.+.++.+...|+ +|+.++++.++++.+.+ .+... . .|-.+ .+++.+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999998 9999999999999999 89999998877654322 11112 1 23222 2233333333322
Q ss_pred --CCccEEEEcCCC
Q 018022 271 --GGADYCFECVGL 282 (362)
Q Consensus 271 --~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 369999999984
No 197
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.015 Score=52.62 Aligned_cols=82 Identities=16% Similarity=0.201 Sum_probs=53.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhc--CC
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMT--DG 271 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~--~~ 271 (362)
-.+.+++|+|+ |.+|.+++..+...|+ +|++++++.++++.+.+ .+. ..++..+-...+++.+.+.++. .+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999999999 89999998887654432 121 1223222101233444443332 13
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
.+|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 198
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.014 Score=52.96 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=53.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 275 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~ 275 (362)
.+.+|+|+|+ |.+|.+.++.+...|+ +|+++++++.+.+.+ .+++... ..|..+ +..+.+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4789999998 9999999999999999 899999887776544 3454322 223332 2233333333221 26899
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 199
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.035 Score=50.46 Aligned_cols=77 Identities=19% Similarity=0.220 Sum_probs=52.8
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cC-C-cE--EEcCCCCCCccHHHHHHhhc---CCCc
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-V-TE--FVNSKNCGDKSVSQIIIDMT---DGGA 273 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g-~-~~--vv~~~~~~~~~~~~~i~~~~---~~g~ 273 (362)
.++||+|+ |.+|...++.+...|+ +|++++++.++++.+.+ .+ . .+ ..|-.+ ..++.+.+.+.. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47999998 9999999999888999 99999998887766543 32 1 12 223332 233444444332 3479
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999985
No 200
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.48 E-value=0.044 Score=54.39 Aligned_cols=79 Identities=25% Similarity=0.413 Sum_probs=50.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHH-HHHhcCCcE-EEcCCCCCCccHHHHHHhhc--CCCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFE-IGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~-~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g~ 273 (362)
++.++||+|+ |++|.+.++.+...|+ +|+++++.. ++++ ..++++... ..|-.+ ...+.+.+.... .+++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCCC
Confidence 5789999998 9999999999999999 888887743 2222 334455432 234333 122222222222 1269
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999983
No 201
>PRK08589 short chain dehydrogenase; Validated
Probab=96.48 E-value=0.048 Score=50.11 Aligned_cols=78 Identities=24% Similarity=0.354 Sum_probs=50.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHh---cCCc-EE--EcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~---~g~~-~v--v~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.++||+|+ +++|.+.++.+...|+ +|++++++ ++.+ .+++ .+.. .+ .|-.+ ++++.+.+.+...
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 4679999998 9999999998888999 99999988 4433 2333 2321 12 23222 2333333333321
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 368999998874
No 202
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.048 Score=49.47 Aligned_cols=81 Identities=19% Similarity=0.175 Sum_probs=52.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc---CCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF---GVT-EFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~---g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.++||+|+ |.+|...++.+...|+ +++++++++++.+..+++ +.. .++..+-...+.+.+.+.+... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 3678999998 9999999988888999 788888888776444432 322 2222211012333333333322 378
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
No 203
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.47 E-value=0.081 Score=47.33 Aligned_cols=104 Identities=20% Similarity=0.226 Sum_probs=62.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc------hHH--HH---------------HHhcCCcEEEcCCCCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS------EKF--EI---------------GKRFGVTEFVNSKNCG 257 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~------~~~--~~---------------~~~~g~~~vv~~~~~~ 257 (362)
...+|+|.|.|++|.+++..+.+.|+.++..+|-++ .|+ .+ .++.+..--+...+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-- 106 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-- 106 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH--
Confidence 347899999999999999999999999988887543 121 11 11222211121111
Q ss_pred CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.--..+.+.++...++|+||||...-..=-.++..+..++=.++..++.
T Consensus 107 ~f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga 155 (263)
T COG1179 107 DFITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA 155 (263)
T ss_pred hhhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence 0111234455555589999999987653334555455532455655543
No 204
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.46 E-value=0.014 Score=58.68 Aligned_cols=74 Identities=23% Similarity=0.252 Sum_probs=56.2
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
+.++++|+|+|.|..|++++++++..|+ +|++.|.+.++.+.++++|+.. +.... ..+.+. .+|+||.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQIA-----DYALVVT 76 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHhh-----cCCEEEE
Confidence 4578999999999999999999999999 9999998777777677788743 32211 112221 4799999
Q ss_pred cCCCHH
Q 018022 279 CVGLAS 284 (362)
Q Consensus 279 ~~g~~~ 284 (362)
+.|.+.
T Consensus 77 SpGi~~ 82 (488)
T PRK03369 77 SPGFRP 82 (488)
T ss_pred CCCCCC
Confidence 999763
No 205
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.05 Score=49.68 Aligned_cols=79 Identities=23% Similarity=0.269 Sum_probs=48.7
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 018022 201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
.+.++||+|+ + ++|.+.++.+...|+ +|+.++++++..+.+ ++.|...++ |-.+ +++..+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 4678999998 4 799999988888999 888887764222222 223433322 3222 2333334433322
Q ss_pred -CCccEEEEcCCC
Q 018022 271 -GGADYCFECVGL 282 (362)
Q Consensus 271 -~g~d~vid~~g~ 282 (362)
+.+|+++.+.|.
T Consensus 84 ~g~iDilVnnag~ 96 (260)
T PRK06603 84 WGSFDFLLHGMAF 96 (260)
T ss_pred cCCccEEEEcccc
Confidence 369999998873
No 206
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.043 Score=50.43 Aligned_cols=80 Identities=16% Similarity=0.133 Sum_probs=51.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
+.++||+|+ |.+|...++.+...|+ +|++++++.++++.+.+ ++.. .++..+-.+.+.+.+.+.+... +++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457999998 9999999998888898 89999998887765543 2221 2222211012233333333221 378999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999885
No 207
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.43 E-value=0.053 Score=49.13 Aligned_cols=79 Identities=23% Similarity=0.310 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHhhc--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMT--D 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~ 270 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+. +.|... .+ |-.+ .+++.+.+.+.. .
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4689999998 9999999998888899 8999998877654432 223221 22 3222 233333333332 1
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 368999999985
No 208
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.42 E-value=0.018 Score=56.37 Aligned_cols=76 Identities=16% Similarity=0.121 Sum_probs=55.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
-.+.+|+|+|+|.+|.+++..+...|+..++++.|+.+|.+.+ ++++...++.++ .+.+... .+|+||.
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---------~l~~~l~-~aDiVI~ 248 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---------ELPQLIK-KADIIIA 248 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---------HHHHHhc-cCCEEEE
Confidence 4578999999999999999999999988999999998886554 456522333221 2222222 4999999
Q ss_pred cCCCHHH
Q 018022 279 CVGLASL 285 (362)
Q Consensus 279 ~~g~~~~ 285 (362)
|++.++.
T Consensus 249 aT~a~~~ 255 (414)
T PRK13940 249 AVNVLEY 255 (414)
T ss_pred CcCCCCe
Confidence 9998853
No 209
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.061 Score=48.34 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE-EE--cCCCCCCccHHHHHHhhc--CCCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--DGGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~-vv--~~~~~~~~~~~~~i~~~~--~~g~ 273 (362)
++.+++|+|+ |.+|.+.++.+...|+ +|++++++.++.+.+ ++++... .+ |..+ ..+..+.+.... .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999998 9999999999999999 899999887766544 3455432 22 2222 122222222222 1368
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999999874
No 210
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.41 E-value=0.045 Score=45.92 Aligned_cols=81 Identities=26% Similarity=0.270 Sum_probs=51.0
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC--chHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~--~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
+++||+|+ +++|++.++.+...|..+|+.+.++ .++.+.+ +..+.. .++..+-...+++.+.+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36899998 9999999888888877688999988 4444333 333432 233222111233444444443 227
Q ss_pred ccEEEEcCCCH
Q 018022 273 ADYCFECVGLA 283 (362)
Q Consensus 273 ~d~vid~~g~~ 283 (362)
+|++|.+.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999998863
No 211
>PRK06484 short chain dehydrogenase; Validated
Probab=96.41 E-value=0.048 Score=55.08 Aligned_cols=103 Identities=23% Similarity=0.271 Sum_probs=69.1
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE---EEcCCCCCCccHHHHHHhhcC--CC
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE---FVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
..+.++||+|+ +++|++.++.+...|+ +|++++++.++++.+.+ .+... ..|-.+ .+++.+.+.+... +.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 35788999998 9999999999999999 99999998888766554 44322 123222 2333333433322 36
Q ss_pred ccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 273 ADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 273 ~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+|++|.+.|.. ...+.++..++.+ |+|++++..
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 99999988742 1133445666665 899998764
No 212
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.41 E-value=0.016 Score=53.58 Aligned_cols=98 Identities=18% Similarity=0.229 Sum_probs=71.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
+..+|.|+|.|.+|.-++.+|..+|+ +|...+.+.+|+..+..+ +.+.-.-+.+ +.++.+.+. ++|++|.+
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~-----~aDlvIga 238 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK-----KADLVIGA 238 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh-----hccEEEEE
Confidence 34567888999999999999999999 999999999999999874 4442222222 134444443 48998885
Q ss_pred CCCH------HHHHHHHHHhccCCceEEEEccCC
Q 018022 280 VGLA------SLVQEAYACCRKGWGKTIVLGVDQ 307 (362)
Q Consensus 280 ~g~~------~~~~~~~~~l~~~~G~iv~~G~~~ 307 (362)
+=.+ ...++..+.|+++ +.++.+....
T Consensus 239 VLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 239 VLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred EEecCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 4321 3467889999998 9999886543
No 213
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.032 Score=51.03 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=51.1
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYCF 277 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~vi 277 (362)
+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+... +... ..|-.+ .+++.+.+.+... +.+|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence 468999998 9999999998888999 8999998866554322 2222 223222 2344444444322 2689999
Q ss_pred EcCCC
Q 018022 278 ECVGL 282 (362)
Q Consensus 278 d~~g~ 282 (362)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99985
No 214
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.025 Score=50.72 Aligned_cols=77 Identities=19% Similarity=0.328 Sum_probs=52.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEE-EcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCF 277 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~v-v~~~~~~~~~~~~~i~~~~~~g~d~vi 277 (362)
.+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+ .+..+.+.+. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence 4678999998 9999999999999999 89999998877765543 444322 23332 2222222221 13699999
Q ss_pred EcCCC
Q 018022 278 ECVGL 282 (362)
Q Consensus 278 d~~g~ 282 (362)
.+.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 99984
No 215
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.40 E-value=0.066 Score=50.85 Aligned_cols=110 Identities=19% Similarity=0.133 Sum_probs=73.3
Q ss_pred CCCCCCEEEEECCChHHHHHHHHH-HHcCCCEEEEEcCCchHHHHHH-h----cCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022 198 NVEVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDVISEKFEIGK-R----FGVTEFVNSKNCGDKSVSQIIIDMTDG 271 (362)
Q Consensus 198 ~~~~g~~vlI~Gag~~G~~a~~la-~~~g~~~vi~~~~~~~~~~~~~-~----~g~~~vv~~~~~~~~~~~~~i~~~~~~ 271 (362)
..+...+++|+|+|..|.+.+..+ ...++++|.+.+++.++.+.+. + ++.. +.... ++.+.+.
T Consensus 123 a~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~-----~~~~~~~----- 191 (325)
T PRK08618 123 AREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN-----SADEAIE----- 191 (325)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC-----CHHHHHh-----
Confidence 334567899999999998877554 4678889999999998876543 2 3432 22222 2333332
Q ss_pred CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcC
Q 018022 272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG 323 (362)
Q Consensus 272 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 323 (362)
..|+|+.|++..+.+-. ..++++ -.++.+|.+.+. ..+++. .++.+.
T Consensus 192 ~aDiVi~aT~s~~p~i~--~~l~~G-~hV~~iGs~~p~-~~E~~~-~~~~~a 238 (325)
T PRK08618 192 EADIIVTVTNAKTPVFS--EKLKKG-VHINAVGSFMPD-MQELPS-EAIARA 238 (325)
T ss_pred cCCEEEEccCCCCcchH--HhcCCC-cEEEecCCCCcc-cccCCH-HHHhhC
Confidence 48999999998764333 888996 788899986433 335565 344433
No 216
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.062 Score=49.29 Aligned_cols=76 Identities=20% Similarity=0.270 Sum_probs=49.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE----EEcCCCCCCccHHHHHHhhc--CCC
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE----FVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~----vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
+++|+|+ |++|.+.++.+...|+ +|+++++++++++.+ +..+... ..|-.+ .+.+.+.+.+.. .++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899998 9999999999888999 888999887765443 2233321 233332 122222233322 126
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 217
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.36 E-value=0.067 Score=47.49 Aligned_cols=100 Identities=18% Similarity=0.286 Sum_probs=69.8
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHH
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII 265 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i 265 (362)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|.. .++..+. ..
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~---~~----- 138 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG---TL----- 138 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---cc-----
Confidence 45667889999999999866 7777777777653 299999999988776654 3443 2332221 10
Q ss_pred HhhcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022 266 IDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 266 ~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
.... +.||.|+-........+.+++.|+++ |+++..
T Consensus 139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 0112 37999987766666567889999998 998775
No 218
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.35 E-value=0.085 Score=47.70 Aligned_cols=81 Identities=25% Similarity=0.359 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+.++++.++++.+. ..+.. ..+..+-.+.+.+.+.+.++.. +.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999998 9999999999988999 9999998877654432 22322 1222221112333333333221 36
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 219
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.35 E-value=0.042 Score=49.87 Aligned_cols=79 Identities=25% Similarity=0.270 Sum_probs=51.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh---cCCcE---EEcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE---FVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++...+..++ .+.+. ..|-.+ .+++.+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 3678999998 9999999999999999 89999887543333333 23321 223222 2333334443322 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
.+|++|.+.|.
T Consensus 84 ~id~lv~nAg~ 94 (260)
T PRK12823 84 RIDVLINNVGG 94 (260)
T ss_pred CCeEEEECCcc
Confidence 69999999873
No 220
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.34 E-value=0.037 Score=48.13 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=63.0
Q ss_pred cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcCCC
Q 018022 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGG 272 (362)
Q Consensus 197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~~g 272 (362)
..++++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+.+. +.... .+..+ +.. .+.
T Consensus 41 ~~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~---~d~~~-~~~--~~~ 112 (187)
T PRK00107 41 PYLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVH---GRAEE-FGQ--EEK 112 (187)
T ss_pred hhcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEe---ccHhh-CCC--CCC
Confidence 3355689999998855 5555566654443399999999887766653 45432 11111 12211 111 237
Q ss_pred ccEEEEcCCC--HHHHHHHHHHhccCCceEEEEc
Q 018022 273 ADYCFECVGL--ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 273 ~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~G 304 (362)
||+|+-.... ...++.+.+.|+++ |+++++-
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9999974332 35577899999998 9999873
No 221
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.018 Score=52.34 Aligned_cols=83 Identities=23% Similarity=0.276 Sum_probs=54.9
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc--EEE--cCCCCCCccHHHHHHhhcC-
Q 018022 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT--EFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~--~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
..-++.++||+|+ |.+|...+..+...|+ +|++++++.+..+.+.+ ..-. .++ |..+ +..+.+.+.+...
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVER 83 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence 3357789999998 9999999999999999 89999998776665543 2211 222 3222 2233333333211
Q ss_pred -CCccEEEEcCCCH
Q 018022 271 -GGADYCFECVGLA 283 (362)
Q Consensus 271 -~g~d~vid~~g~~ 283 (362)
+++|+||.+.|..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 2799999988853
No 222
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.33 E-value=0.15 Score=45.94 Aligned_cols=99 Identities=20% Similarity=0.240 Sum_probs=60.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------HH----HHHHhcCCcEEEcCCCCCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGVTEFVNSKNCGD 258 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~~----~~~~~~g~~~vv~~~~~~~ 258 (362)
..+|+|+|+|++|..++..+.+.|+.+++.+|.+.= |. +.+++++.+.-+...+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--- 87 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--- 87 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence 367999999999999999999999999999985531 11 1223333322121111
Q ss_pred ccH-HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCc-eEEEEc
Q 018022 259 KSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG-KTIVLG 304 (362)
Q Consensus 259 ~~~-~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G-~iv~~G 304 (362)
..+ .+.+.++....+|+||||+.+...-..+.+.+... + .++..+
T Consensus 88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~-~ip~I~s~ 134 (231)
T cd00755 88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKR-KIPVISSM 134 (231)
T ss_pred eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHh-CCCEEEEe
Confidence 111 12233333336999999999877555566666664 4 344433
No 223
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.07 Score=48.27 Aligned_cols=79 Identities=16% Similarity=0.206 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c---CCc-E--EEcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F---GVT-E--FVNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~---g~~-~--vv~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.+++|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.+ + +.. + ..|-.+ .+.+...+.+...
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 4678999998 9999999999999999 89999988876654432 2 321 1 222222 2333333333321
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 268999998874
No 224
>PRK09242 tropinone reductase; Provisional
Probab=96.30 E-value=0.099 Score=47.36 Aligned_cols=79 Identities=22% Similarity=0.216 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c-----CCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F-----GVTE-FV--NSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----g~~~-vv--~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ + +... .+ |-.+ .+++.+.+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4679999998 9999999999999999 89999988877654432 1 2211 22 2222 1233333333221
Q ss_pred --CCccEEEEcCCC
Q 018022 271 --GGADYCFECVGL 282 (362)
Q Consensus 271 --~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 379999999985
No 225
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.30 E-value=0.064 Score=48.93 Aligned_cols=102 Identities=19% Similarity=0.296 Sum_probs=62.2
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc---hHHHHH-Hhc-CCc-EE--EcCCCCCCccHHHHHHhhc
Q 018022 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRF-GVT-EF--VNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~-g~~-~v--v~~~~~~~~~~~~~i~~~~ 269 (362)
.+.+++|+|+ +++|.+.++.+...|+ +|+.++++. ++++.+ +++ +.. .. .|-.+ .+++.+.+.++.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4678999987 4899999998888999 888886543 333333 333 211 12 23222 233333444333
Q ss_pred C--CCccEEEEcCCCH-------H----------------------HHHHHHHHhccCCceEEEEccC
Q 018022 270 D--GGADYCFECVGLA-------S----------------------LVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 270 ~--~g~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
. +.+|+++.+.|.. . ..+.++..++++ |+|++++..
T Consensus 83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~ 149 (257)
T PRK08594 83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYL 149 (257)
T ss_pred HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEccc
Confidence 2 3799999987631 0 123445566776 999988764
No 226
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.29 E-value=0.023 Score=51.84 Aligned_cols=81 Identities=23% Similarity=0.269 Sum_probs=53.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY 275 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~ 275 (362)
.+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. .++..+-.+.+++.+.+.+... +.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4678999998 9999999999999999 89999998887766543 3321 2222111011333333433321 26999
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9999884
No 227
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.074 Score=48.33 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=50.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+. ..+.. .++ |-.+ ...+.+.+.+... ++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG 78 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 57999998 9999999999989999 9999999876654332 22332 122 2222 2333333433321 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 228
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.29 E-value=0.04 Score=51.28 Aligned_cols=43 Identities=28% Similarity=0.234 Sum_probs=38.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (362)
.+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 5678999999999999999999999989999999988876653
No 229
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.28 E-value=0.085 Score=46.41 Aligned_cols=81 Identities=26% Similarity=0.351 Sum_probs=56.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
.|.+++|.|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +++. .++..+ + ....+|+++-|
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l-------~~~~~Dv~vp~ 92 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----I-------YSVDADVFAPC 92 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----h-------ccccCCEEEec
Confidence 57899999999999999999999999 99999999888776654 4643 333221 1 11148888866
Q ss_pred CCCHHHHHHHHHHhcc
Q 018022 280 VGLASLVQEAYACCRK 295 (362)
Q Consensus 280 ~g~~~~~~~~~~~l~~ 295 (362)
......-...++.++.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 5544334455566654
No 230
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.026 Score=52.62 Aligned_cols=81 Identities=22% Similarity=0.279 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
.+.+++|+|+ |++|.+.++.+...|+ +|++++++.++++.+.+ .+.. .++..+-.+.+++.+.+.+.. -+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999999888999 99999998877655432 2322 222222101223333333221 137
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 231
>PRK09186 flagellin modification protein A; Provisional
Probab=96.28 E-value=0.063 Score=48.50 Aligned_cols=78 Identities=21% Similarity=0.362 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-Hhc----CCcE--E--EcCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVTE--F--VNSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~----g~~~--v--v~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ +++ +... + .|-.+ ++.+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999998 9999999999999999 899999887776543 222 2211 2 23222 2334344443322
Q ss_pred --CCccEEEEcCC
Q 018022 271 --GGADYCFECVG 281 (362)
Q Consensus 271 --~g~d~vid~~g 281 (362)
+++|++|.+.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 26899999885
No 232
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.27 E-value=0.074 Score=47.46 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=51.9
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-E--EcCCCCCCccHHHHHHhhcC--C
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-v--v~~~~~~~~~~~~~i~~~~~--~ 271 (362)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +..+... . .|..+ +..+.+.+.+... +
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 468999998 9999999999888999 799999988775443 2234322 2 23222 2334444443321 2
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
.+|.+|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999865
No 233
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.27 E-value=0.076 Score=44.99 Aligned_cols=87 Identities=25% Similarity=0.255 Sum_probs=59.0
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+..+ .+..+.+.+ .|+||-|+...
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHHH-----BSEEEE-SSSH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhhc-----ccceEeecccc
Confidence 68899999999999999999999 99999999999999888774322 223333332 68888888886
Q ss_pred HHHHHH------HHHhccCCceEEEEcc
Q 018022 284 SLVQEA------YACCRKGWGKTIVLGV 305 (362)
Q Consensus 284 ~~~~~~------~~~l~~~~G~iv~~G~ 305 (362)
..+... +..++++ ..++.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 555544 3345554 55666654
No 234
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.26 E-value=0.017 Score=52.61 Aligned_cols=79 Identities=18% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.+++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+. +.. ..+ |-.+ .++..+.+.+... +.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4689999998 9999999999999999 899999988777666543 321 122 2222 1233333433322 368
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 81 d~li~~Ag~ 89 (262)
T TIGR03325 81 DCLIPNAGI 89 (262)
T ss_pred CEEEECCCC
Confidence 999999873
No 235
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.088 Score=47.31 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=49.0
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEE--EcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEF--VNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~v--v~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
.+++|+|+ |++|...+..+...|+ +|+++++++++++.+.+.+. ..+ .|-.+ .+++.+.+.+.. ...|+++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~-~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLP-FIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcc-cCCCEEEE
Confidence 46899998 9999998888888999 89999999888776654331 122 23222 233444444332 24677776
Q ss_pred cCC
Q 018022 279 CVG 281 (362)
Q Consensus 279 ~~g 281 (362)
+.|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 665
No 236
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.24 E-value=0.014 Score=49.92 Aligned_cols=103 Identities=19% Similarity=0.189 Sum_probs=66.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcC-CCCC-------------CccHHHHHH
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNCG-------------DKSVSQIII 266 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~-~~~~-------------~~~~~~~i~ 266 (362)
+..+|+|+|+|.+|+.|+++++.+|+ +++..+...++++.++..+...+... .... .....+.+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34789999999999999999999999 99999999999888888776543321 1100 112222333
Q ss_pred hhcCCCccEEEEcCC-----CHHH-HHHHHHHhccCCceEEEEccC
Q 018022 267 DMTDGGADYCFECVG-----LASL-VQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 267 ~~~~~g~d~vid~~g-----~~~~-~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+... .+|++|-+.= .+.. .++.++.|+++ .-|+.+...
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 3221 4799885321 1222 35788889996 788888764
No 237
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.23 E-value=0.052 Score=49.03 Aligned_cols=81 Identities=21% Similarity=0.236 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
.+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.. .+.. +.+..+-.+++++.+.+.++. .++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 99999998877654322 2322 222221111233333333322 136
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.++|.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 238
>PRK06128 oxidoreductase; Provisional
Probab=96.22 E-value=0.092 Score=49.04 Aligned_cols=102 Identities=23% Similarity=0.207 Sum_probs=62.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--H----HHHHHhcCCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--K----FEIGKRFGVTE-FV--NSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~----~~~~~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.++||+|+ |++|.+.+..+...|+ +|+.+.++.+ + .+.+++.+... ++ |-.+ .+.+.+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 4679999998 9999999999999999 7777765432 1 12233444322 22 2222 1223333333221
Q ss_pred --CCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 271 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 271 --~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+++|++|.+.|.. ..++.++..++.+ |+|++++..
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 2699999998841 1234455566776 899988654
No 239
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.023 Score=51.43 Aligned_cols=81 Identities=22% Similarity=0.240 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE--EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTD--GGADY 275 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~~i~~~~~--~g~d~ 275 (362)
.+.++||+|+ |.+|...++.+...|+ +|+.++++.+..+...+..... .+..+-...+++.+.+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999999988999 8999998877665555543211 222221112333333333321 26899
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999985
No 240
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.029 Score=51.15 Aligned_cols=81 Identities=25% Similarity=0.336 Sum_probs=53.4
Q ss_pred CCCCCEEEEECC-C-hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcEE--E--cCCCCCCccHHHHHHh
Q 018022 199 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF--V--NSKNCGDKSVSQIIID 267 (362)
Q Consensus 199 ~~~g~~vlI~Ga-g-~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~v--v--~~~~~~~~~~~~~i~~ 267 (362)
+..+.+++|+|+ | ++|.+.++.+...|+ +|++++++.++++...+ ++...+ + |-.+ ++++.+.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 445789999987 6 799999999999999 89999988877654432 343222 2 3222 1233333333
Q ss_pred hc--CCCccEEEEcCCC
Q 018022 268 MT--DGGADYCFECVGL 282 (362)
Q Consensus 268 ~~--~~g~d~vid~~g~ 282 (362)
.. .+.+|++|.+.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1378999999984
No 241
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.19 E-value=0.11 Score=47.72 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=48.3
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g--~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|+ + ++|.+.++.+...|+ +|+.+++++...+.+++ .+....+.-+-.+.+++.+.+.+... +
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 4678999997 3 799999998888999 88888776421222322 23222222111112334444443332 3
Q ss_pred CccEEEEcCC
Q 018022 272 GADYCFECVG 281 (362)
Q Consensus 272 g~d~vid~~g 281 (362)
.+|++|++.|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6899999997
No 242
>PRK06398 aldose dehydrogenase; Validated
Probab=96.19 E-value=0.045 Score=49.85 Aligned_cols=74 Identities=22% Similarity=0.284 Sum_probs=48.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
.+.++||+|+ +++|.+.+..+...|+ +|+++++++++.. .... ..|-.+ +.++.+.+.+... +.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 3679999998 9999999999999999 8999988765432 1111 123222 2333333433322 269999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 243
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.19 E-value=0.098 Score=48.19 Aligned_cols=81 Identities=19% Similarity=0.284 Sum_probs=49.7
Q ss_pred CCCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc---hHHHHH-HhcCCcEEEcCCCCCCccHHHHHHhhcC--
Q 018022 200 EVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 200 ~~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~g~~~vv~~~~~~~~~~~~~i~~~~~-- 270 (362)
-.+.++||+|+ +++|++.++.+...|+ +|+.+.+++ ++++.+ ++++....+..+-.+.++..+.+.++..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 35678999987 5899999999999999 888887653 333333 3345322222221112333333333322
Q ss_pred CCccEEEEcCC
Q 018022 271 GGADYCFECVG 281 (362)
Q Consensus 271 ~g~d~vid~~g 281 (362)
+.+|++|.+.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 36899999987
No 244
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.028 Score=51.36 Aligned_cols=79 Identities=16% Similarity=0.193 Sum_probs=52.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
++.++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+ .+.. .++ |..+ +..+.+.+.+...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 8999999999999999 99999998877654432 2322 222 3222 2233333333321
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 369999998873
No 245
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.16 E-value=0.049 Score=51.25 Aligned_cols=91 Identities=25% Similarity=0.416 Sum_probs=62.7
Q ss_pred CEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022 203 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (362)
Q Consensus 203 ~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 281 (362)
.+|.|+|+|.+|.+.+..++..|. .+|++.++++++.+.+++.|....+. .+..+.+ ...|+||.|++
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 579999999999999998888884 38999999999988888887532111 1122222 25899999998
Q ss_pred CHHH---HHHHHHHhccCCceEEEEcc
Q 018022 282 LASL---VQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 282 ~~~~---~~~~~~~l~~~~G~iv~~G~ 305 (362)
.... +..+...++++ ..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 7542 33344456665 56666654
No 246
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.029 Score=50.85 Aligned_cols=79 Identities=22% Similarity=0.223 Sum_probs=52.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.++||+|+ +++|.+.++.+...|+ +|++++++.++++.+.+ .+.. .. .|-.+ ++.+.+.+.+...
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4788999998 9999999999999999 89999998877655432 2322 12 23222 2333333333321
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 247
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.14 E-value=0.048 Score=45.44 Aligned_cols=96 Identities=22% Similarity=0.260 Sum_probs=62.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vi 277 (362)
..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .... .+..+.+ .++|+||
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEELL-----AEADLII 86 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhcc-----ccCCEEE
Confidence 456889999999999999988888874489999998887665 44555421 0111 1111111 2699999
Q ss_pred EcCCCHHH----HHHHHHHhccCCceEEEEccC
Q 018022 278 ECVGLASL----VQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 278 d~~g~~~~----~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.|++.... .......++++ ..++.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~ 118 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN 118 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence 99987642 11223446675 667777653
No 248
>PRK14967 putative methyltransferase; Provisional
Probab=96.13 E-value=0.11 Score=46.45 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=65.7
Q ss_pred HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhc
Q 018022 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~ 269 (362)
....++++++||-.|+|. |..+..+++. +..++++++.+++.++.+++ .+.. .+++ .++.+. +.
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~---~~ 98 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARA---VE 98 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhh---cc
Confidence 445678899999999987 8888888775 55599999999988776554 3432 2332 222221 12
Q ss_pred CCCccEEEEcCC---C------------------------HHHHHHHHHHhccCCceEEEEc
Q 018022 270 DGGADYCFECVG---L------------------------ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 270 ~~g~d~vid~~g---~------------------------~~~~~~~~~~l~~~~G~iv~~G 304 (362)
.+.||+|+...+ . ...+.++.+.|+++ |+++++-
T Consensus 99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 237999997532 0 12345678899998 9998763
No 249
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.12 E-value=0.13 Score=46.41 Aligned_cols=79 Identities=18% Similarity=0.305 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
++.+++|+|+ |.+|...+..+...|+ +|+.++++.++++.+ ++.+.. ..+ |-.+ ++++.+.+.+...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999988888999 999999987765443 233321 222 2222 2333333333322
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 368999999884
No 250
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.11 E-value=0.07 Score=50.30 Aligned_cols=94 Identities=11% Similarity=0.100 Sum_probs=61.8
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 281 (362)
+|+|+|+ |.+|...+..+...|+ +|++++|+.++...+...+...+. |..+ .+.+.+... ++|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d------~~~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL------PETLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC------HHHHHHHHC-CCCEEEECCC
Confidence 6999998 9999999999999999 899999887776655555654332 2222 122333222 5899999876
Q ss_pred CHH------------HHHHHHHHhccCCc--eEEEEccC
Q 018022 282 LAS------------LVQEAYACCRKGWG--KTIVLGVD 306 (362)
Q Consensus 282 ~~~------------~~~~~~~~l~~~~G--~iv~~G~~ 306 (362)
... ....+++.++.. | +++.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccc
Confidence 321 113455555554 4 78887763
No 251
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.05 E-value=0.06 Score=47.43 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
...+|+|+|+|++|..+++.+.+.|+.+++.+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999876
No 252
>PRK06196 oxidoreductase; Provisional
Probab=96.05 E-value=0.038 Score=51.99 Aligned_cols=79 Identities=19% Similarity=0.205 Sum_probs=52.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEE--cCCCCCCccHHHHHHhhcC--CCcc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV--NSKNCGDKSVSQIIIDMTD--GGAD 274 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv--~~~~~~~~~~~~~i~~~~~--~g~d 274 (362)
.+.+++|+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++..-+++ |-.+ ..++.+.+.++.. +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4678999998 9999999998888999 8999999887765432 23211222 2222 1233333433322 3799
Q ss_pred EEEEcCCC
Q 018022 275 YCFECVGL 282 (362)
Q Consensus 275 ~vid~~g~ 282 (362)
++|.+.|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99999874
No 253
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.03 E-value=0.093 Score=47.33 Aligned_cols=112 Identities=22% Similarity=0.350 Sum_probs=78.1
Q ss_pred hhhHH-HHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCc
Q 018022 187 STGVG-AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDK 259 (362)
Q Consensus 187 ~ta~~-~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~ 259 (362)
...|. .+....+..+|++||=+|+|. |-.+..+++..|-..|+++|.+++-++.+++ .|... .+..+.
T Consensus 36 ~~~Wr~~~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dA---- 110 (238)
T COG2226 36 HRLWRRALISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDA---- 110 (238)
T ss_pred hHHHHHHHHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEech----
Confidence 34444 244556677999999987765 8889999999886699999999998888765 22221 121111
Q ss_pred cHHHHHHhhcCCCccEEEEcCCC------HHHHHHHHHHhccCCceEEEEccCCC
Q 018022 260 SVSQIIIDMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQP 308 (362)
Q Consensus 260 ~~~~~i~~~~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~~~ 308 (362)
+.+- +.+..||++..+.|- +.++.++.+.|+|+ |+++.+-...+
T Consensus 111 ---e~LP-f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 111 ---ENLP-FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred ---hhCC-CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 1111 223379999887774 35689999999998 99998877543
No 254
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.03 E-value=0.13 Score=46.31 Aligned_cols=76 Identities=16% Similarity=0.287 Sum_probs=51.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE-EE--cCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FV--NSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~-vv--~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
+++|+|+ |.+|.+.+..+...|+ +|++++++.++++.+.. ++... .+ |-.+ .+++.+.+.++.. +++|++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899998 9999999999999999 89999998887766543 34321 22 2222 2333333333322 269999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998874
No 255
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.034 Score=50.36 Aligned_cols=80 Identities=21% Similarity=0.205 Sum_probs=51.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ .+. .+++..+-.+++.+.+.+.+... +.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999998 9999999999999999 99999988876654432 222 12332221012333333333321 368
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999874
No 256
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.16 Score=45.43 Aligned_cols=104 Identities=18% Similarity=0.162 Sum_probs=61.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-HHH----HHHhcCCc-EEEcCCCCCCccHHHHHHhhc--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVT-EFVNSKNCGDKSVSQIIIDMT--DG 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~ 271 (362)
++.+++|+|+ |.+|...++.+...|+ +++.+.++.. +.+ .+...+.. ..+..+-.+.+++.+.+.+.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999999999 7766655433 222 22233322 222222101223333333322 13
Q ss_pred CccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 272 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 272 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
++|++|.+.|.. ..++.+++.++.+ |+++.++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 699999998841 1123445566675 899988753
No 257
>PRK07985 oxidoreductase; Provisional
Probab=96.00 E-value=0.12 Score=48.28 Aligned_cols=102 Identities=21% Similarity=0.175 Sum_probs=62.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~----~~~g~~~-vv--~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+.+ ++.+... ++ |-.+ .+++.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 5678999998 9999999999999999 888876543 233322 2334321 22 2222 2333333333322
Q ss_pred --CCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 271 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 271 --~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+++|+++.+.|.. ..++.++..++.+ |++++++..
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3689999987731 1233455566676 899988754
No 258
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.99 E-value=0.052 Score=48.87 Aligned_cols=81 Identities=16% Similarity=0.263 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD 274 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d 274 (362)
.+.++||+|+ |.+|.+.+..+...|+ +|++++++.. ..+.+++.+.. .++..+-.+.+++.+.+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999998 9999999999999999 8999987652 12333444432 2222221112334444443322 2699
Q ss_pred EEEEcCCC
Q 018022 275 YCFECVGL 282 (362)
Q Consensus 275 ~vid~~g~ 282 (362)
++|.+.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999874
No 259
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.98 E-value=0.079 Score=48.84 Aligned_cols=105 Identities=19% Similarity=0.342 Sum_probs=75.2
Q ss_pred hHHHHHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEE--cCCCCCCc
Q 018022 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFV--NSKNCGDK 259 (362)
Q Consensus 189 a~~~l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv--~~~~~~~~ 259 (362)
++..+.+.+++++|++||=+|+|- |.+++-+|+..|+ +|++++-+++..+.+++ .|.. ++. ++++
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 444567889999999999999976 7778888888899 99999999998777654 5553 121 2222
Q ss_pred cHHHHHHhhcCCCccEEEE-----cCCC---HHHHHHHHHHhccCCceEEEEccCCCC
Q 018022 260 SVSQIIIDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGVDQPG 309 (362)
Q Consensus 260 ~~~~~i~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~G~~~~~ 309 (362)
+. +.||.|+- .+|. +..+..+.+.|+++ |++.+.......
T Consensus 134 --------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 --------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred --------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11 13776653 4444 35578899999998 999887664433
No 260
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.056 Score=49.20 Aligned_cols=83 Identities=23% Similarity=0.286 Sum_probs=51.5
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchH-HHH----HHhcCC--cEEEcCCCCCCccHHHHHHhhc
Q 018022 199 VEVGSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEK-FEI----GKRFGV--TEFVNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 199 ~~~g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~-~~~----~~~~g~--~~vv~~~~~~~~~~~~~i~~~~ 269 (362)
+..+.++||+|+ |++|.+.++-+...| + +|++++++.++ ++. +++.+. .+++..+-.+.+++.+.+.+..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999998 999999888776664 7 99999988765 433 233332 1233222111233333344333
Q ss_pred C-CCccEEEEcCCC
Q 018022 270 D-GGADYCFECVGL 282 (362)
Q Consensus 270 ~-~g~d~vid~~g~ 282 (362)
. +++|++|.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 379999987765
No 261
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.97 E-value=0.1 Score=47.20 Aligned_cols=81 Identities=21% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+... .+..+-.+...+.+.+.+.. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999998 9999999999999999 899999888665433 3344332 22222101122323333221 126
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999885
No 262
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.97 E-value=0.06 Score=50.06 Aligned_cols=128 Identities=22% Similarity=0.300 Sum_probs=73.8
Q ss_pred CceEEcCCCCCccchhccccchhhhHHHHH-HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAW-RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (362)
Q Consensus 165 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~-~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (362)
+.++++.+++.+- ......|++. +. ....+++|.+||=+|+|. |.+++..++ +|+.+++++|.++--.+.++
T Consensus 130 ~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 130 ELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred ceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHH
Confidence 4566666665332 2222233332 22 223356999999999865 665555444 56669999998887666555
Q ss_pred h----cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 018022 244 R----FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 244 ~----~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+ .+....+.... .+ ......++.||+|+-.+=.. ....++...++++ |++++.|-.
T Consensus 203 eNa~~N~v~~~~~~~~---~~---~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 203 ENARLNGVELLVQAKG---FL---LLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred HHHHHcCCchhhhccc---cc---chhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 4 23332110000 00 11112224799998755322 3456888999997 999999975
No 263
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.93 E-value=0.041 Score=57.20 Aligned_cols=77 Identities=27% Similarity=0.304 Sum_probs=56.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch---------------------HHHHHHhcCCcEEEcCCCCCCc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 259 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~g~~~vv~~~~~~~~ 259 (362)
.+++|+|+|+|+.|+.++..++..|+ .|+++++.+. +.++++++|++..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888887663 5667788898766654321111
Q ss_pred cHHHHHHhhcCCCccEEEEcCCCH
Q 018022 260 SVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 260 ~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
.+. ++. .++|.||.++|..
T Consensus 388 ~~~----~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCCC
Confidence 222 221 2699999999974
No 264
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.93 E-value=0.11 Score=46.60 Aligned_cols=109 Identities=22% Similarity=0.212 Sum_probs=68.5
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCC--EEEEEcCC----chH--------HHHHHhcCCcEEEcCCCCCCccHHHHH
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSVSQII 265 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~--~vi~~~~~----~~~--------~~~~~~~g~~~vv~~~~~~~~~~~~~i 265 (362)
-.+.+++|+|+|..|.+++..+...|.+ +++.++++ .+| .++++.++... . . .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 3567999999999999999999999998 89999998 444 33444443211 0 1 1343444
Q ss_pred HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (362)
Q Consensus 266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 325 (362)
. ++|++|.+++....-...++.|.++ ..+..+.. + . .+..+......+..
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn--P-~-~e~~~~~A~~~ga~ 145 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN--P-V-PEIWPEEAKEAGAD 145 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC--C-C-CcCCHHHHHHcCCc
Confidence 2 4899999998443234677778775 55544432 1 2 23344444444443
No 265
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.93 E-value=0.023 Score=50.53 Aligned_cols=101 Identities=18% Similarity=0.223 Sum_probs=67.8
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHH
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 265 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i 265 (362)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++ .|.+. ++..+. .+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~------~~~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG------TQGW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc------ccCC
Confidence 45667889999999999866 6666777776653 279999999887776653 45432 222211 1111
Q ss_pred HhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 266 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
. ..+.||.|+-..........+.+.|+++ |++++.
T Consensus 142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred c--ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 0 1127999987665555567888999998 998865
No 266
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.92 E-value=0.059 Score=50.29 Aligned_cols=95 Identities=23% Similarity=0.385 Sum_probs=60.4
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE-EcCCCCCCccHHHHHHhhcCCC
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF-VNSKNCGDKSVSQIIIDMTDGG 272 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v-v~~~~~~~~~~~~~i~~~~~~g 272 (362)
..+|++||=+|+|. |.+++..++ +|+++|+++|.++.-.+.+++ .|.. .+ +... .+. ..+.
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~----~~~-------~~~~ 225 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS----EDL-------VEGK 225 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT----SCT-------CCS-
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe----ccc-------cccc
Confidence 57889999998754 555555455 488899999999887666553 2321 22 2111 111 1247
Q ss_pred ccEEEEcCCCHH---HHHHHHHHhccCCceEEEEccCC
Q 018022 273 ADYCFECVGLAS---LVQEAYACCRKGWGKTIVLGVDQ 307 (362)
Q Consensus 273 ~d~vid~~g~~~---~~~~~~~~l~~~~G~iv~~G~~~ 307 (362)
||+|+-..-... ....+.+.++++ |.+++.|...
T Consensus 226 ~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 226 FDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred CCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 999997766553 244667789998 9999999863
No 267
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.91 E-value=0.043 Score=54.86 Aligned_cols=78 Identities=24% Similarity=0.332 Sum_probs=55.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc---------------------hHHHHHHhcCCcEEEcCCCCCCc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGDK 259 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~---------------------~~~~~~~~~g~~~vv~~~~~~~~ 259 (362)
.+++|+|+|+|+.|+.++..++..|+ .|++++..+ ...+.++++|++..++..-. .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence 67899999999999999999999999 788887654 24567788898765554220 1
Q ss_pred cHHHHHHhhcCCCccEEEEcCCCHH
Q 018022 260 SVSQIIIDMTDGGADYCFECVGLAS 284 (362)
Q Consensus 260 ~~~~~i~~~~~~g~d~vid~~g~~~ 284 (362)
++ .+.++. .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111221 26999999999753
No 268
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.052 Score=49.08 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=50.4
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHhhcCCCc
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
+.++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+ .+.. .+ .|..+ .+.+.+...+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~------~~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD------AIDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC------HHHHHHHhcCCC
Confidence 357999998 9999999999999999 99999988776554432 2322 12 23222 223333333479
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 75 d~vi~~ag~ 83 (257)
T PRK09291 75 DVLLNNAGI 83 (257)
T ss_pred CEEEECCCc
Confidence 999999873
No 269
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.047 Score=49.42 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.+++|+|+ |++|.+.+..+...|+ +|+.+++++++++.+. +.+... ++..+-..++.+.+.+.+... +.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3678999998 9999999999989999 8999998887765442 233222 222111012223333333322 27
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 270
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.90 E-value=0.083 Score=45.11 Aligned_cols=96 Identities=20% Similarity=0.228 Sum_probs=63.3
Q ss_pred hccccchhhhHHHHHHhcCCCCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (362)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 258 (362)
...++...++...+.....--.+.+|+|+|+|. +|..++..+...|+ +|+++.++.
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------- 78 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------- 78 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc----------------------
Confidence 334444344444333333345789999999987 59989999999999 788887652
Q ss_pred ccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 259 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+++.+.+. .+|+||-+++.++.+..- .++++ -.++.++..
T Consensus 79 ~~l~~~l~-----~aDiVIsat~~~~ii~~~--~~~~~-~viIDla~p 118 (168)
T cd01080 79 KNLKEHTK-----QADIVIVAVGKPGLVKGD--MVKPG-AVVIDVGIN 118 (168)
T ss_pred hhHHHHHh-----hCCEEEEcCCCCceecHH--HccCC-eEEEEccCC
Confidence 12333333 389999999997744432 46665 677788874
No 271
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.063 Score=47.59 Aligned_cols=77 Identities=19% Similarity=0.249 Sum_probs=52.9
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+... ..|-.+ .+.+.+.+.++.++++|++|.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 46899987 9999999988888899 8999999888877776665432 223322 12333333333333799999988
Q ss_pred CC
Q 018022 281 GL 282 (362)
Q Consensus 281 g~ 282 (362)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 75
No 272
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.84 E-value=0.087 Score=45.21 Aligned_cols=94 Identities=14% Similarity=0.239 Sum_probs=63.0
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 282 (362)
+|.|+|| |.+|...++=|+.+|. .|+++.|+++|+...+..- ++.-+- -++.+....+. |+|+||++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~---i~q~Di---fd~~~~a~~l~--g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVT---ILQKDI---FDLTSLASDLA--GHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccce---eecccc---cChhhhHhhhc--CCceEEEeccC
Confidence 6889998 9999999999999999 9999999999986653321 111111 11111111222 79999999886
Q ss_pred H---------HHHHHHHHHhccC-CceEEEEccC
Q 018022 283 A---------SLVQEAYACCRKG-WGKTIVLGVD 306 (362)
Q Consensus 283 ~---------~~~~~~~~~l~~~-~G~iv~~G~~ 306 (362)
. ...+.++..++.- --|+..+|+-
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 5 2244567777763 2488888864
No 273
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.83 E-value=0.054 Score=49.29 Aligned_cols=78 Identities=21% Similarity=0.253 Sum_probs=50.4
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h---cCCcEEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~---~g~~~vv~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. + .+..+.+..+-.+.+++.+.+.+... +++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899998 9999999999989999 8999999887765432 2 23222232221012333344433322 379999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999884
No 274
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.82 E-value=0.075 Score=51.65 Aligned_cols=90 Identities=23% Similarity=0.316 Sum_probs=58.5
Q ss_pred EEEECCChHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHh--cC--Cc-EEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 205 VVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR--FG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 205 vlI~Gag~~G~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~--~g--~~-~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
|+|+|+|.+|..+++.+....-. +|++.+++.++.+.+.+ .+ +. ..+|..+ .+.+.++.. +.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND------PESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT------HHHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC------HHHHHHHHh-cCCEEEE
Confidence 68899999999999999877643 89999999999877653 22 22 2334333 233555544 4799999
Q ss_pred cCCCHHHHHHHHHHhccCCceEEE
Q 018022 279 CVGLASLVQEAYACCRKGWGKTIV 302 (362)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~~G~iv~ 302 (362)
|+|.......+..+++.+ -.++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CCccchhHHHHHHHHHhC-CCeec
Confidence 999765455566666665 56666
No 275
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.81 E-value=0.051 Score=51.47 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=53.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCCcE----EEcCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTE----FVNSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~~~----vv~~~~~~~~~~~~~i~~~~~ 270 (362)
.|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+ .+... .+|-.+ ...+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5889999998 9999998888888899 89999999988765432 12111 223221 01233444555444
Q ss_pred C-CccEEEEcCCC
Q 018022 271 G-GADYCFECVGL 282 (362)
Q Consensus 271 ~-g~d~vid~~g~ 282 (362)
+ .+|++|+++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 4 57799998873
No 276
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.79 E-value=0.13 Score=46.73 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=61.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
.+.+|||+|+ |.+|...+..+...|+ +|+++.++.++.......+. -.++..+- .+..+.+.+....++|+||.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl---~d~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADV---TEGSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeC---CCCHHHHHHHhhcCCCEEEE
Confidence 3578999998 9999999998888898 89998888776544322121 12222111 11112233322126999999
Q ss_pred cCCCHH-------------HHHHHHHHhccC-CceEEEEccC
Q 018022 279 CVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD 306 (362)
Q Consensus 279 ~~g~~~-------------~~~~~~~~l~~~-~G~iv~~G~~ 306 (362)
+.|... ....+++.+... .+++++++..
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 877421 133455555543 1578887653
No 277
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.79 E-value=0.17 Score=45.39 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=49.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEE-EcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
++.++||+|+ |.+|+..+..+...|+ +|++ ..++.++.+.+ +..+.. .++..+-.+.+++...+.+... +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999998 9999999999999999 6554 56666554332 233432 2222221112333333333321 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 278
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.79 E-value=0.048 Score=51.29 Aligned_cols=103 Identities=13% Similarity=0.026 Sum_probs=70.3
Q ss_pred CCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHH-HhcCCc--EEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY 275 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~-~~~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~ 275 (362)
....+++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+.+ +++... .+. . .+..+.+. .+|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCCE
Confidence 46678999999999999888886 47888999999998886654 344311 111 1 22333342 5999
Q ss_pred EEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022 276 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317 (362)
Q Consensus 276 vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~ 317 (362)
|+.|++++..+-.. .++++ -.++.+|.+.+.+ -+++..
T Consensus 192 VitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p~~-~El~~~ 229 (304)
T PRK07340 192 VVTATTSRTPVYPE--AARAG-RLVVAVGAFTPDM-AELAPR 229 (304)
T ss_pred EEEccCCCCceeCc--cCCCC-CEEEecCCCCCCc-ccCCHH
Confidence 99999977533333 37886 7888999865433 466644
No 279
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.76 E-value=0.027 Score=52.16 Aligned_cols=44 Identities=34% Similarity=0.341 Sum_probs=40.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~ 244 (362)
++++++|.|+|+.+.+++..++..|+.+++++.|+.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999998899999999999777654
No 280
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.75 E-value=0.24 Score=45.53 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=61.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------HH----HHHHhcCCc-EEEcCCCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGVT-EFVNSKNC 256 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~~----~~~~~~g~~-~vv~~~~~ 256 (362)
...+|+|+|+|++|..++..+.+.|+.+++.+|.+.- |. +.+.+++.. +|....+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~- 107 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD- 107 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec-
Confidence 4578999999999999999999999889999886521 11 122233332 1221111
Q ss_pred CCccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 257 ~~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.-..+.+.++....+|+||||++....-..+.+.+...+=.++..|..
T Consensus 108 --~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 108 --FITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred --ccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 000122333333369999999998654445555555541345555543
No 281
>PRK07574 formate dehydrogenase; Provisional
Probab=95.74 E-value=0.097 Score=50.78 Aligned_cols=45 Identities=31% Similarity=0.355 Sum_probs=36.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g 246 (362)
.|.+|.|+|.|.+|+..++.++..|. +|++.+++....+..+.++
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 56789999999999999999999999 9999998763333333333
No 282
>PRK06484 short chain dehydrogenase; Validated
Probab=95.74 E-value=0.15 Score=51.42 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=55.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcE---EEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.++||+|+ +++|.+.++.+...|+ +|+.++++.++++.+ ++++... ..|-.+ ++++.+.+.++.. +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5788999998 9999999999999999 999999988877654 4455432 223222 2334444444322 379
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999999874
No 283
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.74 E-value=0.042 Score=51.06 Aligned_cols=76 Identities=13% Similarity=0.013 Sum_probs=52.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
.+.+++|+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+. .++.. .+.... ..+.+.+.. ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc-cCCCEEEE
Confidence 5778999999999999999999999989999999988876653 34321 111110 001111111 25899999
Q ss_pred cCCCH
Q 018022 279 CVGLA 283 (362)
Q Consensus 279 ~~g~~ 283 (362)
|++..
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98865
No 284
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.73 E-value=0.068 Score=48.04 Aligned_cols=81 Identities=21% Similarity=0.273 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
++.++||+|+ |++|+..++.+...|+ +|+.++++.++.+.+. ..+.. ..+..+-.+...+.+.+.+... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4779999998 9999999999999999 8999998887655432 23432 1222211001233333333322 36
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|.+|.+.|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 285
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.73 E-value=0.025 Score=44.13 Aligned_cols=91 Identities=21% Similarity=0.283 Sum_probs=60.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
.+.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-.... ..+. +.. .++|.||.++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~------~~~~----~~l-~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR------REFE----EDL-DGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE------SS-G----GGC-TTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh------hhHH----HHH-hhheEEEecC
Confidence 46789999999999999999999998 999998775 2222 2212221 1121 111 1699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCCCC
Q 018022 281 GLASLVQEAYACCRKGWGKTIVLGVDQPG 309 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~ 309 (362)
+.+..-+.+....+.. |.++.....+..
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~~ 96 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDPEL 96 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence 9988566777777776 899988764433
No 286
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.063 Score=49.22 Aligned_cols=81 Identities=20% Similarity=0.258 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc---C--Cc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---G--VT-EFVNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~---g--~~-~vv~~~~~~~~~~~~~i~~~~~-- 270 (362)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+... ++ + .. .++..+-.++.++.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3679999998 9999999999999999 8999998876654332 21 1 11 2221111012333333333321
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (276)
T PRK05875 85 GRLHGVVHCAGG 96 (276)
T ss_pred CCCCEEEECCCc
Confidence 268999999873
No 287
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.076 Score=48.36 Aligned_cols=81 Identities=23% Similarity=0.320 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--CC-cEEEcCCCCCCccHHHHHHhhc-CCCcc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GV-TEFVNSKNCGDKSVSQIIIDMT-DGGAD 274 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--g~-~~vv~~~~~~~~~~~~~i~~~~-~~g~d 274 (362)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ + +. .+.+..+-.+.+.+.+.+.... .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999997 9999999998888999 89999998877655532 2 21 1222211101122222222221 23789
Q ss_pred EEEEcCCC
Q 018022 275 YCFECVGL 282 (362)
Q Consensus 275 ~vid~~g~ 282 (362)
++|.+.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999885
No 288
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.076 Score=47.57 Aligned_cols=82 Identities=18% Similarity=0.180 Sum_probs=52.5
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
....+++|+|+ |.+|...+..+...|. +|++++++.++.+.+.+ .+.. .++.-+-.+.+++...+.+... +
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34578999998 9999999999999999 99999998876654432 2221 1222211012333333333321 2
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
.+|++|.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999984
No 289
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.69 E-value=0.026 Score=55.95 Aligned_cols=94 Identities=12% Similarity=0.103 Sum_probs=67.0
Q ss_pred HhcCCCCCCEEE----EECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhh
Q 018022 195 RTANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 195 ~~~~~~~g~~vl----I~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~ 268 (362)
...++++|+.+| |+|+ |++|.+++|+++..|+ .|+++.....+....+..+.+ .+++... ..+.+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 345678888887 7765 9999999999999999 999887766655444455555 3566554 3344444433
Q ss_pred cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC
Q 018022 269 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (362)
Q Consensus 269 ~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~ 307 (362)
. ..+...++.|.++ |+++.++...
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 1 3367788889997 9999998753
No 290
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.69 E-value=0.18 Score=45.90 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=61.1
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc------hHHHHHHhcCC-cEEE--cCCCCCCccHHHHHHhh
Q 018022 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS------EKFEIGKRFGV-TEFV--NSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~------~~~~~~~~~g~-~~vv--~~~~~~~~~~~~~i~~~ 268 (362)
.+.+++|+|+ +++|++.++.+...|+ +|+.+.++. +..+.+.+.+. ...+ |-.+ .++..+.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence 4678999996 4899999999888999 777765332 22333322221 1222 2222 23333333333
Q ss_pred cC--CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 269 TD--GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 269 ~~--~g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.. +.+|++|.+.|.. ...+.++..|+.+ |+|+.++..
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 22 3799999998831 0124566677776 999988754
No 291
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.071 Score=50.24 Aligned_cols=79 Identities=18% Similarity=0.170 Sum_probs=51.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----g~~-~vv--~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.+++|+|+ +++|.+++..+...|+ +|+.++++.++.+.+. ++ +.. .++ |-.+ .+++.+.+.++..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999998 9999999998888999 9999999887655432 11 111 122 3222 1223333333322
Q ss_pred --CCccEEEEcCCC
Q 018022 271 --GGADYCFECVGL 282 (362)
Q Consensus 271 --~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 268999998874
No 292
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.17 Score=46.62 Aligned_cols=99 Identities=21% Similarity=0.323 Sum_probs=60.9
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhc-CCCc
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMT-DGGA 273 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~-~~g~ 273 (362)
+.+++|+|+|++|.+.+..+. .|. +|+.++++.++++.+. ..+.. .++ |-.+ .+.+.+.+.+.. -+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 357889999999999888874 788 9999998877654432 22322 122 3222 233333333321 1379
Q ss_pred cEEEEcCCCHH------------------HHHHHHHHhccCCceEEEEcc
Q 018022 274 DYCFECVGLAS------------------LVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 274 d~vid~~g~~~------------------~~~~~~~~l~~~~G~iv~~G~ 305 (362)
|++|.+.|... .++.++..++.+ |++++++.
T Consensus 78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS 126 (275)
T PRK06940 78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIAS 126 (275)
T ss_pred CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEe
Confidence 99999998531 133445566665 77777654
No 293
>PRK05717 oxidoreductase; Validated
Probab=95.66 E-value=0.068 Score=48.44 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.|.+++|+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++.. ..+ |-.+ ..++.+.+.++.. +.+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999998 9999999999988998 899998877665443 344422 122 2222 1233333333322 268
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998884
No 294
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.66 E-value=0.21 Score=43.63 Aligned_cols=103 Identities=21% Similarity=0.394 Sum_probs=63.5
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~ 267 (362)
....+++++++||=.|+|. |..+..+++.....+|++++.+++..+.+++ ++... ++.. +..+.+..
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~~ 105 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLAQ 105 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHhh
Confidence 4556778899988888744 4455555655433399999999988877654 45432 3322 22222222
Q ss_pred hcCCCcc-EEEEcCCC-HHHHHHHHHHhccCCceEEEEcc
Q 018022 268 MTDGGAD-YCFECVGL-ASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 268 ~~~~g~d-~vid~~g~-~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
+. ..+| ++++.... ...++.+.+.|+++ |+++....
T Consensus 106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22 2234 44443222 35678899999998 99988854
No 295
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.64 E-value=0.11 Score=48.22 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=38.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (362)
..+.+++|+|+|+.+++++..+...|+++++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34678999999999999999888899989999999988876654
No 296
>PRK06194 hypothetical protein; Provisional
Probab=95.64 E-value=0.071 Score=49.22 Aligned_cols=80 Identities=21% Similarity=0.287 Sum_probs=50.9
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hc---CCcE-EEcCCCCCCccHHHHHHhhc--CCCc
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---GVTE-FVNSKNCGDKSVSQIIIDMT--DGGA 273 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~---g~~~-vv~~~~~~~~~~~~~i~~~~--~~g~ 273 (362)
+.++||+|+ |++|...++.+...|+ +|++++++.++++.+. ++ +... ++..+-.+.+++.+.+.+.. .+++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999998 9999999999988999 8999998876654432 22 3321 22222101123333333321 1368
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999885
No 297
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=95.63 E-value=0.027 Score=52.08 Aligned_cols=98 Identities=19% Similarity=0.293 Sum_probs=61.5
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc---EEEcCCCCCCccHHHHH
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT---EFVNSKNCGDKSVSQII 265 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~---~vv~~~~~~~~~~~~~i 265 (362)
+.+.+++++|++||-+|+| -|..+..+|+..|+ +|++++.+++..+.++ +.|.. .+..- ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~------D~---- 121 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ------DY---- 121 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-------G----
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe------ec----
Confidence 5688899999999999997 47777788888899 9999999998887765 45542 22221 11
Q ss_pred HhhcCCCccEEEE-----cCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022 266 IDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 266 ~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~G 304 (362)
+++. +.||.|+- .+|. +..++.+.+.|+|+ |++++-.
T Consensus 122 ~~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 122 RDLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred cccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 1222 26898875 3442 24578899999998 9987543
No 298
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.61 E-value=0.089 Score=51.15 Aligned_cols=96 Identities=17% Similarity=0.194 Sum_probs=67.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
=.+.++||+|+|-+|..++..+...|+.+|++..|+.+|.+ +++++|.. ++..+ ++.+.+. .+|+||-
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~-----el~~~l~-----~~DvVis 244 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE-----ELLEALA-----EADVVIS 244 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH-----HHHHhhh-----hCCEEEE
Confidence 36788999999999999999999999889999999998865 46778843 33222 2333332 4999999
Q ss_pred cCCCHHHH---HHHHHHhccCCc-eEEEEccC
Q 018022 279 CVGLASLV---QEAYACCRKGWG-KTIVLGVD 306 (362)
Q Consensus 279 ~~g~~~~~---~~~~~~l~~~~G-~iv~~G~~ 306 (362)
+++.+..+ ......++.... -++.++.+
T Consensus 245 sTsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 245 STSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred ecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 99987422 244555555412 35667763
No 299
>PRK08643 acetoin reductase; Validated
Probab=95.61 E-value=0.07 Score=48.29 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=50.9
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE-EE--cCCCCCCccHHHHHHhhcC--C
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE-FV--NSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~-vv--~~~~~~~~~~~~~i~~~~~--~ 271 (362)
+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+... .+ |-.+ ++.+.+.+.+... +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 468999998 9999999999999999 89999988776544322 23221 22 2222 2333333333321 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 300
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.61 E-value=0.038 Score=51.25 Aligned_cols=95 Identities=17% Similarity=0.103 Sum_probs=60.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
..+.+++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+. .++....+.. . .+..+.+ ..+|+||+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence 35678999999999999999999999669999999988876654 3432110111 1 0111111 25899999
Q ss_pred cCCCHHH-----HHHHHHHhccCCceEEEEc
Q 018022 279 CVGLASL-----VQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 279 ~~g~~~~-----~~~~~~~l~~~~G~iv~~G 304 (362)
|++.... .......+.++ ..++.+-
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 9885431 01123566665 6666663
No 301
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.073 Score=47.92 Aligned_cols=81 Identities=21% Similarity=0.192 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--CCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
++.+++|+|+ |.+|...++.+...|+ +|+.+.++.++.+...+ + +.. .++..+-.++..+.+.+.+... +++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999998 9999999988888898 89999988776544332 2 221 2222221112333333333321 379
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
No 302
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.60 E-value=0.12 Score=45.11 Aligned_cols=76 Identities=26% Similarity=0.307 Sum_probs=51.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCcE-EEcCCCCCCccHHHHHHhhcCCCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~~-vv~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
.+.+++|+|+ |.+|.+++..+...|. +|+.+.++.++.+.+.+ + +... ..+..+ .+++.+.+ . ++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~----~-~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI----K-GA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH----h-cC
Confidence 5678999997 9999998888888887 99999998887665432 2 2221 122222 12222222 2 58
Q ss_pred cEEEEcCCCHH
Q 018022 274 DYCFECVGLAS 284 (362)
Q Consensus 274 d~vid~~g~~~ 284 (362)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999988665
No 303
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.59 E-value=0.16 Score=48.07 Aligned_cols=134 Identities=13% Similarity=0.054 Sum_probs=75.1
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-----------cCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----------FGVTEFVNSKNCGDKSVSQIIIDMTDG 271 (362)
Q Consensus 203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----------~g~~~vv~~~~~~~~~~~~~i~~~~~~ 271 (362)
.+|.|+|+|.+|...++.+...|+ .|++.+.+++.++.++. .+...--.... -.+...+.+.. .
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---i~~~~~l~~av-~ 82 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPAR---LRFVATIEACV-A 82 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhh---ceecCCHHHHh-c
Confidence 579999999999999988889999 99999998876554322 22110000000 00111111211 2
Q ss_pred CccEEEEcCCCHH-----HHHHHHHHhccCCceEEEEccCCCCCccccCHHHH---HhcCcEEEEeeccCCC--------
Q 018022 272 GADYCFECVGLAS-----LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV---LHSGKILMGSLFGGLK-------- 335 (362)
Q Consensus 272 g~d~vid~~g~~~-----~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~---~~~~~~i~g~~~~~~~-------- 335 (362)
+.|.|++++.... .+.++.+.++++ .++....+ .++...+ ..+.-++.|.++.+-.
T Consensus 83 ~aDlViEavpE~l~vK~~lf~~l~~~~~~~--aIlaSnTS------~l~~s~la~~~~~p~R~~g~HffnP~~~~pLVEV 154 (321)
T PRK07066 83 DADFIQESAPEREALKLELHERISRAAKPD--AIIASSTS------GLLPTDFYARATHPERCVVGHPFNPVYLLPLVEV 154 (321)
T ss_pred CCCEEEECCcCCHHHHHHHHHHHHHhCCCC--eEEEECCC------ccCHHHHHHhcCCcccEEEEecCCccccCceEEE
Confidence 6999999998653 234455566664 54444332 2233222 2334556665554421
Q ss_pred ------ccccHHHHHHHHHc
Q 018022 336 ------AKSDIPILLKRYMD 349 (362)
Q Consensus 336 ------~~~~l~~~l~~~~~ 349 (362)
..+.++.+.+++++
T Consensus 155 v~g~~T~~e~~~~~~~f~~~ 174 (321)
T PRK07066 155 LGGERTAPEAVDAAMGIYRA 174 (321)
T ss_pred eCCCCCCHHHHHHHHHHHHH
Confidence 23556777777664
No 304
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.25 Score=45.88 Aligned_cols=105 Identities=19% Similarity=0.157 Sum_probs=62.1
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHH----HHhcCCcE-EEcCCCCCCccHHHHHHhhcC--
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~----~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~-- 270 (362)
-.+.++||+|+ |.+|...+..+...|+ +|+.++++.++ .+. ++..+... ++..+-.+...+.+.+.+...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35788999998 9999999988888999 88888776432 222 22233322 222211011233333333221
Q ss_pred CCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 271 GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 271 ~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+++|++|.+.|.. ...+.+.+.++++ |++++++..
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS~ 183 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGSI 183 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 2689999988741 1122344556676 899988753
No 305
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.56 E-value=0.077 Score=47.67 Aligned_cols=81 Identities=21% Similarity=0.182 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
++.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ .+. .+++..+-.+...+.+.+.+... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999998 9999999999999999 89999888876554432 222 22232221011233333333321 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 81 ~d~vi~~ag~ 90 (250)
T TIGR03206 81 VDVLVNNAGW 90 (250)
T ss_pred CCEEEECCCC
Confidence 8999999973
No 306
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.55 E-value=0.14 Score=42.16 Aligned_cols=92 Identities=17% Similarity=0.298 Sum_probs=55.7
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHH----HHHHhcCCc-EEEcCCCCCCc
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKF----EIGKRFGVT-EFVNSKNCGDK 259 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-------------------~~~----~~~~~~g~~-~vv~~~~~~~~ 259 (362)
+|+|.|+|++|...+..+.+.|..++..+|.+. .|. +.++++... ++.....
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~---- 76 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPE---- 76 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEee----
Confidence 488999999999999999999998899997552 111 222333322 1111111
Q ss_pred cHHH-HHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEE
Q 018022 260 SVSQ-IIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 301 (362)
Q Consensus 260 ~~~~-~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv 301 (362)
.+.+ ...+.. .++|+||+|.........+.+.++.. +.-.
T Consensus 77 ~~~~~~~~~~~-~~~diVi~~~d~~~~~~~l~~~~~~~-~i~~ 117 (143)
T cd01483 77 GISEDNLDDFL-DGVDLVIDAIDNIAVRRALNRACKEL-GIPV 117 (143)
T ss_pred ecChhhHHHHh-cCCCEEEECCCCHHHHHHHHHHHHHc-CCCE
Confidence 1111 112222 26999999999877555566666664 5433
No 307
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.54 E-value=0.19 Score=45.26 Aligned_cols=74 Identities=26% Similarity=0.312 Sum_probs=47.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCcc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGAD 274 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~d 274 (362)
.+.++||+|+ |.+|...+..+...|+ +|++++++. ....+.. +.+ |-.+ .+.+.+.+.+... +.+|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4678999998 9999999999888999 899998765 1222221 122 2222 2333333333321 3689
Q ss_pred EEEEcCCC
Q 018022 275 YCFECVGL 282 (362)
Q Consensus 275 ~vid~~g~ 282 (362)
++|.+.|.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99999885
No 308
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.11 Score=45.88 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=47.8
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCC--CccEEEE
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFE 278 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~--g~d~vid 278 (362)
.++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ ....+++..+- .+ .+.+.++..+ ++|.+|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence 57999998 99999988877766 6 89999998877655543 22222332222 11 2233333322 6999999
Q ss_pred cCCC
Q 018022 279 CVGL 282 (362)
Q Consensus 279 ~~g~ 282 (362)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9885
No 309
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.079 Score=49.55 Aligned_cols=81 Identities=17% Similarity=0.161 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-Hhc-----CCc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EFVNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~-----g~~-~vv~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.+++|+|+ |++|.++++.+...|+ +|++++++.++.+.+ +++ +.. .++.-+-.+.+++.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 5689999998 9999999998888899 899999887765432 111 111 1222111012333333444322
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 269999999874
No 310
>PLN03139 formate dehydrogenase; Provisional
Probab=95.53 E-value=0.1 Score=50.58 Aligned_cols=45 Identities=24% Similarity=0.300 Sum_probs=36.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g 246 (362)
.|.+|.|+|.|.+|...++.++..|. +|++.+++....+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57899999999999999999999999 8999988754444444444
No 311
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.086 Score=47.44 Aligned_cols=79 Identities=25% Similarity=0.299 Sum_probs=50.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+.. .. .|-.+ .+.+.+.+.+...
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999998 9999999998888998 89999988766543322 2211 12 22222 1223332332221
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 268999999984
No 312
>PLN02366 spermidine synthase
Probab=95.52 E-value=0.17 Score=47.68 Aligned_cols=99 Identities=15% Similarity=0.153 Sum_probs=67.3
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC------c---EEEcCCCCCCccHHHHHHhh
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV------T---EFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~------~---~vv~~~~~~~~~~~~~i~~~ 268 (362)
....++||++|+|. |..+..+++.-+.++|.+++.+++-.+.+++. .. + +++. .|..+.+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~ 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence 35678999998866 55667778776777999999998888888763 21 1 1221 2333444443
Q ss_pred cCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022 269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 269 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
.++.||+||--... ...++.+.+.|+++ |.++.-+.
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~ 207 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE 207 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence 33479999875433 24577899999998 99987654
No 313
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.081 Score=47.76 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=51.0
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
+.+++|+|+ |.+|.+.++.+...|+ +|+.++++.++.+.+.+ .+.. +.+..+-.+..++.+.+.+... +.+
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 568999998 9999999999999999 99999988776554332 2321 2222211012233333333322 268
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 314
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.51 E-value=0.059 Score=47.23 Aligned_cols=99 Identities=17% Similarity=0.263 Sum_probs=62.0
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhc
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~ 269 (362)
.+..+..++.+||-+|+|. |..+..+++. |. +|++++.+++-++.+++ .+...+ .... .++.+. .+
T Consensus 23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~- 92 (197)
T PRK11207 23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF- 92 (197)
T ss_pred HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-
Confidence 3445566778999999876 7777777764 77 99999999886666553 232211 1111 111110 11
Q ss_pred CCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEE
Q 018022 270 DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 270 ~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~ 303 (362)
.+.||+|+....- ...+..+.+.|+++ |.++++
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~ 133 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV 133 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 2369999976431 24467888899998 986544
No 315
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.51 E-value=0.14 Score=46.25 Aligned_cols=103 Identities=21% Similarity=0.255 Sum_probs=74.9
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~ 268 (362)
....++.+|++|+=.|.|. |.+++-+|++.|. .+|+..+..++..+.+++ +|....+.... .|. ++.
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv----~~~ 158 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDV----REG 158 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccc----ccc
Confidence 4568999999999888765 8888888987775 499999999999888764 45433222111 222 222
Q ss_pred cCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEcc
Q 018022 269 TDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 269 ~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
..+ .+|.+|=-.+.+ ..++.+.+.|+++ |.++++--
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 222 699888777766 6688999999998 99999964
No 316
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.49 E-value=0.41 Score=42.92 Aligned_cols=101 Identities=23% Similarity=0.215 Sum_probs=60.0
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHH----HHHhcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~----~~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
+.++||+|+ |.+|...++-+...|+ +++.+.+ +.++.. .+++.+.. ..+ |-.+ +.++...+.+...
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY 82 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence 578999998 9999999988888999 6665543 323222 22333322 222 2222 1223333333221
Q ss_pred CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 271 GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 271 ~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
+++|++|.+.|.. ...+.+.+.++.. |+++.++..
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~ 142 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASV 142 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcch
Confidence 2689999999841 1133456666776 899998764
No 317
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.09 Score=47.72 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=51.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCC---cEEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV---TEFV--NSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~---~~vv--~~~~~~~~~~~~~i~~~~~--~g 272 (362)
+.+++|+|+ |.+|.+.+..+...|+ +|++++++.++++.+.+ +.. ...+ |-.+ .+.+.+.+.+... +.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 358999998 9999999999888999 99999998887765433 221 1122 2222 2333344333322 25
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 318
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.48 E-value=0.083 Score=48.53 Aligned_cols=80 Identities=26% Similarity=0.258 Sum_probs=51.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h---cCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~---~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.+++|+|+ |++|++.+..+...|+ +|++++++.++.+.+. + .+.. ..+..+-.+..++...+.+... +.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999999999999 8999998876654432 2 2322 1222211011233333333221 37
Q ss_pred ccEEEEcCC
Q 018022 273 ADYCFECVG 281 (362)
Q Consensus 273 ~d~vid~~g 281 (362)
+|++|.+.|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 999999988
No 319
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.4 Score=43.24 Aligned_cols=103 Identities=18% Similarity=0.164 Sum_probs=60.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH----HhcCCcE-EE--cCCCCCCcc---HHHHHHhh
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG----KRFGVTE-FV--NSKNCGDKS---VSQIIIDM 268 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~g~~~-vv--~~~~~~~~~---~~~~i~~~ 268 (362)
.+.++||+|+ +++|.+.++.+...|+ +|+++. ++.++.+.+ ++.+... .+ |-.+ .++ +.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES--LHGVEALYSSLDNE 79 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC--HHHHHHHHHHHHHH
Confidence 3678999998 9999999999999999 777764 444444322 2223221 11 2111 112 22222221
Q ss_pred ----cC-CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccCC
Q 018022 269 ----TD-GGADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ 307 (362)
Q Consensus 269 ----~~-~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~~~ 307 (362)
.+ +++|++|.+.|.. ..++.+++.++.. |+|++++...
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 12 2699999988841 0123456667776 9999987643
No 320
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.12 Score=46.84 Aligned_cols=79 Identities=23% Similarity=0.247 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c----CCc-EEEcCCCCCCccHHHHHHhhcCCCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFVNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----g~~-~vv~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
.+.+++|+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+ + +.. .++..+-...+++.+.+.+. +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence 4689999998 9999999998888999 99999998877655332 1 221 22222110112333333222 369
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999999884
No 321
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.47 E-value=0.072 Score=55.60 Aligned_cols=78 Identities=27% Similarity=0.282 Sum_probs=53.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch---------------------HHHHHHhcCCcEEEcCCCCCC
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGD 258 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~g~~~vv~~~~~~~ 258 (362)
..+.+|+|+|+|+.|+.++..++..|+ +|+++++.+. +.+.++++|++...+..-..+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 8888887543 355667788654443221000
Q ss_pred ccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 259 KSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 259 ~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
-.+ +.+. ..||.||.++|..
T Consensus 404 i~~-~~~~----~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISL-ESLL----EDYDAVFVGVGTY 423 (654)
T ss_pred CCH-HHHH----hcCCEEEEeCCCC
Confidence 111 1111 2699999999863
No 322
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.44 E-value=0.079 Score=48.05 Aligned_cols=80 Identities=20% Similarity=0.256 Sum_probs=50.2
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h----cCC--cEEEcCCCCCCccHHHHHHhhcC--C
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGV--TEFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~----~g~--~~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
+.++||+|+ |.+|.+.+..+...|+ +|+.++++..+.+.+. + .+. .+.+..+-.+++++.+.+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999998 9999999999888999 8999998876554332 1 221 12222222112233333333321 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
++|++|.+.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 78999999874
No 323
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.099 Score=46.80 Aligned_cols=80 Identities=13% Similarity=0.079 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhh---cCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDM---TDG 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~---~~~ 271 (362)
.+.+++|+|+ +++|++.+..+...|+ +|+.++++.++++.+. +.+... .+.-+..+.+++.+.+.+. .++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 8899999988888999 8999999888765432 334322 2211110123333333332 222
Q ss_pred CccEEEEcCC
Q 018022 272 GADYCFECVG 281 (362)
Q Consensus 272 g~d~vid~~g 281 (362)
.+|++|.+.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999986
No 324
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.08 Score=47.98 Aligned_cols=80 Identities=19% Similarity=0.243 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHhcCCcE---EEcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTE---FVNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.+++|+|+ |.+|...++.+...|++.|++++++.++.+. +++.+... .+|-.+ ...+.+.+.....
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999998 9999999999999999449999988765542 22334322 123322 1223333332211
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 369999999985
No 325
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.064 Score=48.07 Aligned_cols=81 Identities=23% Similarity=0.285 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC-c---EEEcCCCCCCcc---HHHHHHhh
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-T---EFVNSKNCGDKS---VSQIIIDM 268 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~-~---~vv~~~~~~~~~---~~~~i~~~ 268 (362)
++.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+. . .-.|..+....+ +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4578999998 9999999999988999 89999999877654422 221 1 112221100112 23334443
Q ss_pred cCCCccEEEEcCCC
Q 018022 269 TDGGADYCFECVGL 282 (362)
Q Consensus 269 ~~~g~d~vid~~g~ 282 (362)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32468999999984
No 326
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.09 Score=47.47 Aligned_cols=81 Identities=25% Similarity=0.297 Sum_probs=51.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
.+.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.. +.+..+-.+..++.+.+.+.. -+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999988888898 899999987765433 233322 222211101122333332221 136
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 327
>PRK00811 spermidine synthase; Provisional
Probab=95.40 E-value=0.12 Score=48.08 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=65.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-C-----C--c---EEEcCCCCCCccHHHHHHhh
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G-----V--T---EFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g-----~--~---~vv~~~~~~~~~~~~~i~~~ 268 (362)
+..++||++|+|. |..+..+++..+.++|++++.+++-.+.+++. . . + +++. .+..+.+.+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567999998866 66677777776777999999999988888763 1 1 1 1222 233334433
Q ss_pred cCCCccEEEEcCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 018022 269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 269 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
..+.||+||-.... ...++.+.+.|+++ |.++.-..
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~~ 192 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQSG 192 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeCC
Confidence 33479999975422 23457888999998 99887643
No 328
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.40 E-value=0.098 Score=47.45 Aligned_cols=79 Identities=20% Similarity=0.384 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
++.++||+|+ |.+|...++.+...|+ +|++++++.++++.+.+ .+.. ..+ |..+ ...+.+.+.++..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4688999998 9999999999888999 89999998877655432 2222 122 3222 2233333333221
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 268999999874
No 329
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.38 E-value=0.092 Score=47.97 Aligned_cols=81 Identities=21% Similarity=0.335 Sum_probs=48.9
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|+ +++|++.++.+...|+ +|+.+.++++..+.+++ .+....+..+-.+.+++.+.+.+... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4678999984 5899999999989999 88887665433333332 23222222111112333333333322 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
++|++|.+.|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999999874
No 330
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.38 E-value=0.55 Score=36.88 Aligned_cols=93 Identities=19% Similarity=0.125 Sum_probs=63.0
Q ss_pred EEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCHH
Q 018022 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 284 (362)
Q Consensus 205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~~ 284 (362)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+. .-.+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 5788999999999999999776 999999999999999998855 444332 1133444432227999999998775
Q ss_pred HHH---HHHHHhccCCceEEEEc
Q 018022 285 LVQ---EAYACCRKGWGKTIVLG 304 (362)
Q Consensus 285 ~~~---~~~~~l~~~~G~iv~~G 304 (362)
.-. ...+.+.+. .+++...
T Consensus 75 ~n~~~~~~~r~~~~~-~~ii~~~ 96 (116)
T PF02254_consen 75 ENLLIALLARELNPD-IRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEEE
T ss_pred HHHHHHHHHHHHCCC-CeEEEEE
Confidence 322 333444454 5666553
No 331
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.11 Score=46.58 Aligned_cols=77 Identities=18% Similarity=0.325 Sum_probs=50.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c-----CCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F-----GVT-EFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----g~~-~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
+.+++|+|+ |.+|...++.+...|. +|++++++.++.+.+.. + +.. +++ |..+ .+.+.+.+.++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 467999998 9999998888888898 89999988877655432 1 211 222 3222 2334444443322
Q ss_pred -CCccEEEEcCC
Q 018022 271 -GGADYCFECVG 281 (362)
Q Consensus 271 -~g~d~vid~~g 281 (362)
+++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 26999999987
No 332
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.35 E-value=0.13 Score=46.03 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=51.1
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
+.++||+|+ +.+|.+.++.+...|+ +|++++++.++ .+.+++.+... ..|-.+ .+++.+.+.+... +++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 457999998 9999999999888999 88889887654 33344455422 122222 2333344444332 269999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
+.+.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999874
No 333
>PRK12743 oxidoreductase; Provisional
Probab=95.35 E-value=0.35 Score=43.82 Aligned_cols=80 Identities=18% Similarity=0.051 Sum_probs=47.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
+.++||+|+ +.+|..+++.+...|+ +|+.+. ++.++.+.+ +..+.. +++..+-.+.+.+.+.+.++.. +.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999998 9999999999999999 776664 444444332 334432 2222211012223333333221 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 334
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.32 E-value=0.17 Score=47.20 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=32.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~ 236 (362)
.+.+++|+|+|++|++++..+...|+++|+++.|+.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999998888899997799999986
No 335
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.32 E-value=0.099 Score=49.32 Aligned_cols=78 Identities=21% Similarity=0.190 Sum_probs=51.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---Cc-EEE--cCCCCCCccHHHHHHhhc--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VT-EFV--NSKNCGDKSVSQIIIDMT--D 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~-~vv--~~~~~~~~~~~~~i~~~~--~ 270 (362)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+. ++. .. .++ |-.+ ...+.+.+.++. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888998 8999998887765433 332 11 122 2222 122333333322 2
Q ss_pred CCccEEEEcCC
Q 018022 271 GGADYCFECVG 281 (362)
Q Consensus 271 ~g~d~vid~~g 281 (362)
+.+|++|.+.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999987
No 336
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.32 E-value=0.19 Score=47.91 Aligned_cols=37 Identities=38% Similarity=0.496 Sum_probs=33.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (362)
.|.+|.|+|.|.+|...++.++..|. +|++.+++...
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999986543
No 337
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.31 E-value=0.37 Score=36.53 Aligned_cols=85 Identities=24% Similarity=0.258 Sum_probs=54.8
Q ss_pred EEEEECCChHHHHHHHHHHHcC---CCEEE-EEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 204 TVVIFGLGSIGLAVAEGARLCG---ATRII-GVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g---~~~vi-~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
+|.|+|+|.+|.+.+.-....| . +|+ +.++++++.+.+. +++... .. .+..+.+. ..|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~-~~------~~~~~~~~-----~advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQA-TA------DDNEEAAQ-----EADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEE-ES------EEHHHHHH-----HTSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccc-cc------CChHHhhc-----cCCEEEE
Confidence 4778899999999999988888 6 777 5599999887764 566432 21 12344444 2799999
Q ss_pred cCCCHHHHHHHHHH---hccCCceEEEE
Q 018022 279 CVGLASLVQEAYAC---CRKGWGKTIVL 303 (362)
Q Consensus 279 ~~g~~~~~~~~~~~---l~~~~G~iv~~ 303 (362)
|+.-.. +...+.. ..++ ..++.+
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 999765 4444433 3443 344443
No 338
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.31 E-value=0.27 Score=41.42 Aligned_cols=87 Identities=25% Similarity=0.255 Sum_probs=56.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
.+.+|.|+|-|.-|.+.++-+|..|. +|++..+.. ...+.+++.|+.. .++.+.++ ..|+|+-.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~v---------~~~~eAv~-----~aDvV~~L 67 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFEV---------MSVAEAVK-----KADVVMLL 67 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-EC---------CEHHHHHH-----C-SEEEE-
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCee---------ccHHHHHh-----hCCEEEEe
Confidence 46899999999999999999999999 555544444 4888899988752 34555655 38999999
Q ss_pred CCCH---HHH-HHHHHHhccCCceEEEEc
Q 018022 280 VGLA---SLV-QEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 280 ~g~~---~~~-~~~~~~l~~~~G~iv~~G 304 (362)
++.. ..+ +++...|+++ ....+.
T Consensus 68 ~PD~~q~~vy~~~I~p~l~~G--~~L~fa 94 (165)
T PF07991_consen 68 LPDEVQPEVYEEEIAPNLKPG--ATLVFA 94 (165)
T ss_dssp S-HHHHHHHHHHHHHHHS-TT---EEEES
T ss_pred CChHHHHHHHHHHHHhhCCCC--CEEEeC
Confidence 8865 323 4566788885 544443
No 339
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.31 E-value=0.16 Score=47.12 Aligned_cols=94 Identities=20% Similarity=0.278 Sum_probs=66.2
Q ss_pred ccccchhhhHHHHHHhcCC-CCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022 181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (362)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 258 (362)
.+||+....+. +.+..++ -.|.+++|+|.|. +|.-++.++...|+ +|+++.+..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 45554444443 3455543 3689999999966 99999999999999 888776431
Q ss_pred ccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 259 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.++.+.++ .+|+||-++|.+..+.. +.++++ ..++.+|..
T Consensus 193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 22333333 38999999999876655 457886 788899874
No 340
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.31 E-value=0.12 Score=46.85 Aligned_cols=80 Identities=26% Similarity=0.381 Sum_probs=52.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. ..+..+-.+...+.+.+.+... +.+|++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 568999998 9999999999999999 89999998887665443 3321 1222111012333333333321 268999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 341
>PLN02253 xanthoxin dehydrogenase
Probab=95.30 E-value=0.09 Score=48.34 Aligned_cols=79 Identities=22% Similarity=0.252 Sum_probs=50.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCC---cEE--EcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEF--VNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~---~~v--v~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ .+++. .+. .|-.+ .+.+.+.+.+... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 3678999988 9999999988888999 899998877655433 33321 112 22222 2333333333222 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
++|++|.+.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 342
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.29 E-value=0.11 Score=47.11 Aligned_cols=79 Identities=24% Similarity=0.378 Sum_probs=50.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHhcCCcE-E--EcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~~-v--v~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.++||+|+ +++|.+.++.+...|+ +|+++++++.. .+.+++.+... + .|-.+ .+++.+.+.+... ++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999999999999 88888765422 22334444322 2 23222 2334444443321 36
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|+++.+.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 343
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.29 E-value=0.22 Score=44.67 Aligned_cols=90 Identities=19% Similarity=0.223 Sum_probs=54.9
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHH----HHHhcCCcEEEcCCCCCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFE----IGKRFGVTEFVNSKNCGD 258 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-------------------~~~~----~~~~~g~~~vv~~~~~~~ 258 (362)
..+|+|.|+|++|..++..+.+.|+.+++.+|.+. .|.+ .+++++.+.-+....
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~--- 97 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN--- 97 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec---
Confidence 47899999999999999999999998998885433 1222 223333321122111
Q ss_pred ccH-HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhcc
Q 018022 259 KSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRK 295 (362)
Q Consensus 259 ~~~-~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~ 295 (362)
..+ .+.+.++.. ++|+||+|+........+-+.+..
T Consensus 98 ~~i~~~~~~~~~~-~~DvVi~~~d~~~~r~~l~~~~~~ 134 (228)
T cd00757 98 ERLDAENAEELIA-GYDLVLDCTDNFATRYLINDACVK 134 (228)
T ss_pred ceeCHHHHHHHHh-CCCEEEEcCCCHHHHHHHHHHHHH
Confidence 111 122333322 599999999988744444444444
No 344
>PRK08317 hypothetical protein; Provisional
Probab=95.29 E-value=0.22 Score=44.30 Aligned_cols=102 Identities=27% Similarity=0.387 Sum_probs=69.3
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHhc----CC-cEEEcCCCCCCccHHHHHH
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIII 266 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~----g~-~~vv~~~~~~~~~~~~~i~ 266 (362)
+.+...+.++++||-+|+|. |..+..++...+ ..++++++.+++.++.+++. +. ..++..+. .++
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 34667889999999999976 888888888763 23999999999888887664 11 11222111 110
Q ss_pred hhcCCCccEEEEcC-----CC-HHHHHHHHHHhccCCceEEEEc
Q 018022 267 DMTDGGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 267 ~~~~~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 304 (362)
.+..+.+|.|+... .. ...+..+.+.|+++ |.+++..
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 11223789888632 22 24578999999998 9998765
No 345
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.11 Score=47.77 Aligned_cols=77 Identities=17% Similarity=0.188 Sum_probs=51.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCc-EEE--cCCCCCCccHHHHHHhhc--CCCccE
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMT--DGGADY 275 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~-~vv--~~~~~~~~~~~~~i~~~~--~~g~d~ 275 (362)
.++||+|+ |.+|...++.+...|. +|+++.++.++++.+++ .+.. .++ |..+ .+.+.+.+.+.. .+++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 47999998 9999999988888899 89999998887766544 2221 122 2222 223333333322 136899
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9999874
No 346
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.27 E-value=0.14 Score=48.94 Aligned_cols=35 Identities=29% Similarity=0.321 Sum_probs=31.4
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~ 236 (362)
..+|+|+|+|++|..++..+.+.|+.+++.+|.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998999998763
No 347
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.27 E-value=0.11 Score=47.10 Aligned_cols=79 Identities=22% Similarity=0.185 Sum_probs=49.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-chHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 275 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~ 275 (362)
.+.+++|+|+ |++|.+.++.+...|+ +|+++.+. ++..+.+++.+... ..|-.+ ++.+.+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4678999998 9999999999988999 77666543 34444454434322 223222 2333344443322 36999
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999875
No 348
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.11 Score=46.99 Aligned_cols=78 Identities=21% Similarity=0.289 Sum_probs=51.0
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCC--cEEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV--TEFV--NSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~--~~vv--~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +.. -+++ |-.+ .+.+.+.+.+... +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 458999998 9999999988888898 89999998877655432 321 1222 2222 2233333333321 268
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999999974
No 349
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.11 Score=46.16 Aligned_cols=74 Identities=19% Similarity=0.249 Sum_probs=49.9
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEE-EcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~v-v~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
+++|+|+ |.+|.+.++.+...|+ +|+.++++.++++.+ ++.+...+ .|-.+ ++++.+.+.++. +.+|++|.+.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-HHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-hcCcEEEECC
Confidence 5899988 9999999999988999 899999988877654 34444322 23222 233333333332 2589999886
Q ss_pred C
Q 018022 281 G 281 (362)
Q Consensus 281 g 281 (362)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 5
No 350
>PRK05855 short chain dehydrogenase; Validated
Probab=95.25 E-value=0.27 Score=50.02 Aligned_cols=79 Identities=19% Similarity=0.221 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.++||+|+ |++|.+.++.+...|+ +|+.++++.++++.+. ..|.. .++ |-.+ .+.+.+.+.+...
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4578999998 9999999998889999 8999999887765543 23432 222 2222 2233333333321
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 368999999885
No 351
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.11 Score=47.68 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCC---cEEE--cCCCCCCccHHHHHHhhcC-
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~---~~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+. .+++ |..+ .+++.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 467999998 9999999998888999 89999888776544422 221 1222 3222 233333 444321
Q ss_pred -CCccEEEEcCCC
Q 018022 271 -GGADYCFECVGL 282 (362)
Q Consensus 271 -~g~d~vid~~g~ 282 (362)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 368999999874
No 352
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.22 E-value=0.17 Score=44.43 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=58.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------H----HHHHHhcCCcEEEcCCCCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------K----FEIGKRFGVTEFVNSKNCG 257 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~----~~~~~~~g~~~vv~~~~~~ 257 (362)
...+|+|.|+|++|...+..+.+.|+.++..+|.+.= | .+.+++++.+..++...
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 3467999999999999999999999988999875421 1 12244555543333222
Q ss_pred CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCce
Q 018022 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 299 (362)
Q Consensus 258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~ 299 (362)
..+.+...++. .++|+||+|.........+-+.+... +.
T Consensus 98 -~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~i 136 (197)
T cd01492 98 -DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GV 136 (197)
T ss_pred -cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CC
Confidence 11111112222 26999999988776444555555554 43
No 353
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.20 E-value=0.34 Score=42.76 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=62.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
.|.+|||+|+|.+|..-++.+...|+ +|++++.+.. .++.+.+.|--..+. .+ +... .+ .++|.||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~--dl--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDAD--IL--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHH--Hh--CCcEEEEEC
Confidence 36799999999999999999999999 8888876543 333344444222222 11 1111 11 269999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 018022 280 VGLASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
++.+..-..+....+.. |..+....
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence 99987445666667775 77776654
No 354
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.12 Score=46.88 Aligned_cols=81 Identities=25% Similarity=0.272 Sum_probs=50.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh---cCCc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.+.+++|+|+ |.+|...+..+...|+ +|+.++++.+..+.+++ .+.. ..+..+-....++.+.+.+... +.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999998 9999999999988999 89999987754443332 2322 1222111011233333333221 268
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999998884
No 355
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.16 E-value=0.14 Score=46.39 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=30.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~ 236 (362)
..+|+|.|+|++|..+++.+.+.|..+++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 37899999999999999999999998999887543
No 356
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.44 Score=43.53 Aligned_cols=78 Identities=22% Similarity=0.199 Sum_probs=48.8
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 275 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~ 275 (362)
++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ..+.+. ++..+-.+..++.+.+.++.. +++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899998 9999999988888899 8999998887655432 223222 222111011223333332221 36999
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999884
No 357
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.12 Score=47.73 Aligned_cols=81 Identities=25% Similarity=0.214 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
.+.++||+|+ |++|.+.+..+...|+ +|++++++.++++.+. ..+... .+..+-.+..++.+.+.+.. -+.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999999999999 8998988877665432 234322 22211101233333333322 136
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 8999999884
No 358
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.13 E-value=0.22 Score=48.32 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=32.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
...+|+|+|+|++|..++..+...|+.+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 55689999999999999999999999999999986
No 359
>PRK08264 short chain dehydrogenase; Validated
Probab=95.13 E-value=0.11 Score=46.50 Aligned_cols=75 Identities=19% Similarity=0.205 Sum_probs=50.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEE--cCCCCCCccHHHHHHhhcCCCccEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTDGGADYC 276 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~~g~d~v 276 (362)
.+.+++|+|+ |.+|...++.+...|+++|++++++.++.+. .+.. +++ |-.+ ..++.+.+... +.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAA--SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhc--CCCCEE
Confidence 4578999987 9999999999999998789999988776543 2221 222 2222 12232222221 258999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999987
No 360
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.11 E-value=0.42 Score=42.09 Aligned_cols=92 Identities=17% Similarity=0.031 Sum_probs=56.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
.+.+|||+|+|.+|...+..+...|+ .|++++... +.+..+.+.+.-. ..... +.+. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~-----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE-----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC-----CChh--hc--CCceEEEEc
Confidence 46799999999999999988888998 888886543 2222222222111 11111 1110 01 168999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 018022 280 VGLASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
++.+. ++..+...+.. +.++....
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 99988 55544444454 66766654
No 361
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=95.11 E-value=0.46 Score=44.99 Aligned_cols=133 Identities=20% Similarity=0.176 Sum_probs=86.1
Q ss_pred EEEEECCChHH-HHHHHHHHHcC--CCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 204 TVVIFGLGSIG-LAVAEGARLCG--ATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 204 ~vlI~Gag~~G-~~a~~la~~~g--~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
+|.|+|+|.++ ...+..++..+ +..+.+.+++.++.+. ++++|..+++ .++.+.+.+ ..+|+|+.+
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll~~---~~iD~V~Ia 74 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY-------TDLEELLAD---PDIDAVYIA 74 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc-------CCHHHHhcC---CCCCEEEEc
Confidence 68899997555 55666666654 4466666888888654 5668876332 233333322 259999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HHHhc-CcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022 280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EVLHS-GKILMGSLFGGLKAKSDIPILLKRYMDKWS 352 (362)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~~~~-~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l 352 (362)
+......+.+..+|.. |+-|++-. ++..++. .+-.+ ++.+.=.++..+ ...++.+-+++++|+|
T Consensus 75 tp~~~H~e~~~~AL~a--GkhVl~EK-----Pla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf--~p~~~~~k~li~~g~l 145 (342)
T COG0673 75 TPNALHAELALAALEA--GKHVLCEK-----PLALTLEEAEELVELARKAGVKLMVGFNRRF--DPAVQALKELIDSGAL 145 (342)
T ss_pred CCChhhHHHHHHHHhc--CCEEEEcC-----CCCCCHHHHHHHHHHHHHcCCceeeehhhhc--CHHHHHHHHHHhcCCc
Confidence 9999889999999999 58888854 3344333 23333 444443333332 3678888999999876
Q ss_pred ccc
Q 018022 353 YVP 355 (362)
Q Consensus 353 ~~~ 355 (362)
-..
T Consensus 146 G~v 148 (342)
T COG0673 146 GEV 148 (342)
T ss_pred Cce
Confidence 543
No 362
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.11 E-value=0.19 Score=45.65 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=30.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
...+|+|+|+|++|..++..+.+.|+.+++.+|.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 34789999999999999999999999899888654
No 363
>PRK06720 hypothetical protein; Provisional
Probab=95.09 E-value=0.18 Score=43.13 Aligned_cols=81 Identities=22% Similarity=0.183 Sum_probs=50.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhc--CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
.+.+++|+|+ +++|...+..+...|+ +|++++++.+..+.+ .+.+.. ..+..+-...+++.+.+.+.. -+.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4778999998 8899999988888998 899999877655332 223432 222222101123333332221 136
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|+++.+.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 364
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.09 E-value=0.16 Score=48.01 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=32.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (362)
.|.+|.|+|.|.+|...++.++..|. +|++.++..+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 9999987554
No 365
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.09 E-value=0.16 Score=47.04 Aligned_cols=88 Identities=17% Similarity=0.233 Sum_probs=57.9
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
+|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|..... . .+. +.+ ...|+||.|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999998888888898 999999999998888877642111 1 111 111 1478999888865
Q ss_pred HH---HHHHHHHhccCCceEEEEcc
Q 018022 284 SL---VQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 284 ~~---~~~~~~~l~~~~G~iv~~G~ 305 (362)
.. ++.+...++++ ..+..+|.
T Consensus 69 ~~~~~~~~l~~~l~~~-~ii~d~~S 92 (279)
T PRK07417 69 LLLPPSEQLIPALPPE-AIVTDVGS 92 (279)
T ss_pred HHHHHHHHHHHhCCCC-cEEEeCcc
Confidence 42 22333444443 34444443
No 366
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.08 E-value=0.28 Score=43.93 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=47.1
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchH-HHHH---HhcCCcEE---EcCCCCCCccHHHHHHhhcC--
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEK-FEIG---KRFGVTEF---VNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~-~~~~---~~~g~~~v---v~~~~~~~~~~~~~i~~~~~-- 270 (362)
+.++||+|+ |.+|...++.+...|+ ++++. .++..+ .+.+ ++.+...+ .|-.+ .+++.+.+.+...
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 578899998 9999999999999999 66664 333332 2222 33344322 22222 1233333333221
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999985
No 367
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=95.07 E-value=0.022 Score=31.34 Aligned_cols=22 Identities=18% Similarity=0.271 Sum_probs=16.1
Q ss_pred eeEEEeccCCCceEEEEeecCCC
Q 018022 17 CRAAIATAPGEPLVIDEVIVDPP 39 (362)
Q Consensus 17 ~ka~~~~~~~~~l~l~~~~~p~~ 39 (362)
|||+++.++++ .+++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999999 99999998875
No 368
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.16 Score=46.03 Aligned_cols=81 Identities=15% Similarity=0.232 Sum_probs=50.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch-HHH-H---HHhcCCc-EEEcCCCCCCccHHHHHHhhcC--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE-I---GKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~-~~~-~---~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~ 271 (362)
.+.++||+|+ +++|.+.++.+...|+ +|++++++.+ .++ . +++.+.. ..+..+-.+++++.+.+.+... +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999988 9999999999999999 8888887653 222 2 2233422 1222111112333333333321 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
.+|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 369
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.18 Score=45.81 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=47.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
.+.+++|+|+ |++|.+.++.+...|+ +|++++++. ++.+.... +....+..+- .+ .+.+.+.. +.+|++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~---~~-~~~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWEC---GK-EESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeC---CC-HHHHHHhc-CCCCEEEE
Confidence 3579999998 9999999999999999 898888776 33222211 1122222221 11 12233333 26999999
Q ss_pred cCCC
Q 018022 279 CVGL 282 (362)
Q Consensus 279 ~~g~ 282 (362)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9985
No 370
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.11 Score=46.98 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=49.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhc--CCCccEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYC 276 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g~d~v 276 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+.++++.++. ........ ..|..+ .+++.+.+.+.. .+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 9999999999988999 899999876551 11111111 123222 233333333332 1368999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999874
No 371
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.05 E-value=0.16 Score=48.50 Aligned_cols=34 Identities=32% Similarity=0.362 Sum_probs=31.1
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
..+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4789999999999999999999999999999975
No 372
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.04 E-value=0.14 Score=45.80 Aligned_cols=81 Identities=21% Similarity=0.284 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.+++|+|+ |.+|...+..+...|+ +|++++++.++.+.+ +..+.. +++..+-.+...+.+.+.+... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 999999987765443 222321 1222221112334444443321 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 373
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.00 E-value=0.39 Score=42.75 Aligned_cols=105 Identities=19% Similarity=0.207 Sum_probs=71.0
Q ss_pred HhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhc
Q 018022 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~ 269 (362)
..+......+||=+|.+ +|..++.+|..+. -.+++.++.++++.+.+++ .|.+..+.-.. ..+..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHhcc
Confidence 44555677778777752 4777778888765 3389999999999988864 57654221111 024556665544
Q ss_pred CCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEE
Q 018022 270 DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 270 ~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 303 (362)
.+.||.||--.... ..++.+++.|+++ |-++.=
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D 165 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD 165 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence 45899998766543 6688999999997 877654
No 374
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.98 E-value=0.15 Score=46.20 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~vv--~~~~~~~~~~~~~i~~~~~-- 270 (362)
.+.++||+|+ +.+|...+..+...|+ +++.++++.++.+.+. +.+.. +++ |-.+ .+++.+.+.+...
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999998889999 8888888777654432 23322 222 3222 2333333333322
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 368999999874
No 375
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.96 E-value=0.56 Score=43.92 Aligned_cols=89 Identities=17% Similarity=0.198 Sum_probs=57.9
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
+|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.... .+..+....+ ...|+||-++...
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~~~--------~s~~~~~~~~--~~~dvIi~~vp~~ 70 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTTGV--------ANLRELSQRL--SAPRVVWVMVPHG 70 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCccc--------CCHHHHHhhc--CCCCEEEEEcCch
Confidence 57889999999988888888898 89999999999988887664321 1111111111 1468888888876
Q ss_pred HHHHH----HHHHhccCCceEEEEcc
Q 018022 284 SLVQE----AYACCRKGWGKTIVLGV 305 (362)
Q Consensus 284 ~~~~~----~~~~l~~~~G~iv~~G~ 305 (362)
.+.. +...++++ -.++.++.
T Consensus 71 -~~~~v~~~l~~~l~~g-~ivid~st 94 (298)
T TIGR00872 71 -IVDAVLEELAPTLEKG-DIVIDGGN 94 (298)
T ss_pred -HHHHHHHHHHhhCCCC-CEEEECCC
Confidence 2333 34444553 34445443
No 376
>PLN00203 glutamyl-tRNA reductase
Probab=94.96 E-value=0.14 Score=51.58 Aligned_cols=73 Identities=18% Similarity=0.270 Sum_probs=52.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC-CcE-EEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g-~~~-vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. .++ ... +...+ +..+.+. .+|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~-----dl~~al~-----~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD-----EMLACAA-----EADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh-----hHHHHHh-----cCCEEEE
Confidence 678999999999999999999999878999999988876654 453 221 11111 2222221 5899999
Q ss_pred cCCCHH
Q 018022 279 CVGLAS 284 (362)
Q Consensus 279 ~~g~~~ 284 (362)
|++.+.
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 998663
No 377
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.96 E-value=0.16 Score=45.31 Aligned_cols=81 Identities=20% Similarity=0.216 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCc-EEEcCCCCCCccHHHHHHhhcC--CCccE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY 275 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d~ 275 (362)
++.++||+|+ |.+|...+..+...|+ +|+..+++.++++.+. ..+.. +++..+-.+.+.+.+.+.+... +++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 9999999998888998 8888888877766543 33321 2222211011233333333221 26999
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999884
No 378
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.96 E-value=0.15 Score=45.72 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=50.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++...+ +..+.. .++..+-.+...+.+.+.+... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999998 9999999988888899 899999886654332 222321 2222211011233333333221 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999998865
No 379
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.93 E-value=0.23 Score=45.84 Aligned_cols=92 Identities=15% Similarity=0.080 Sum_probs=59.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcC---CcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g---~~~vv~~~~~~~~~~~~~i~~~~~~g~d~ 275 (362)
..+.+++|+|+|++|.+.+..+...|. +|++++++.++.+.+. .+. ....+..+ + .....+|+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--------~----~~~~~~Di 181 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD--------E----LPLHRVDL 181 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh--------h----hcccCccE
Confidence 457889999999999999988888898 9999999888765443 332 21222111 1 11125899
Q ss_pred EEEcCCCHHH--HH---HHHHHhccCCceEEEEcc
Q 018022 276 CFECVGLASL--VQ---EAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 276 vid~~g~~~~--~~---~~~~~l~~~~G~iv~~G~ 305 (362)
||+|++.... .. .....++++ ..++.+..
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 9999986420 11 123456775 66666644
No 380
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.42 Score=43.07 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEE-EcCCchHHHHH-Hhc---CCc-EEEcCCCCCCccHHHHHHhhc-----
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEIG-KRF---GVT-EFVNSKNCGDKSVSQIIIDMT----- 269 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~-~~~~~~~~~~~-~~~---g~~-~vv~~~~~~~~~~~~~i~~~~----- 269 (362)
+.+++|+|+ |.+|...++.+...|. +|++ ..++.++.+.+ .++ +.. +++..+-.+.+.+.+.+.+..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 578999998 9999999998888898 6655 46666554332 222 221 222221101233333333321
Q ss_pred --C-CCccEEEEcCCC
Q 018022 270 --D-GGADYCFECVGL 282 (362)
Q Consensus 270 --~-~g~d~vid~~g~ 282 (362)
+ +++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1 268999998875
No 381
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=94.90 E-value=0.14 Score=46.22 Aligned_cols=106 Identities=25% Similarity=0.456 Sum_probs=64.0
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII 266 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~ 266 (362)
.+....++|++||=+|+|. |..+..+++..+. .+|+++|-+++=++.+++ .+.. +.+..+. +++
T Consensus 40 ~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l----- 110 (233)
T PF01209_consen 40 IKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL----- 110 (233)
T ss_dssp HHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB------
T ss_pred HhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----
Confidence 4556788999999998765 7777788887653 299999999998887764 2221 2222222 222
Q ss_pred hhcCCCccEEEEcCCCH------HHHHHHHHHhccCCceEEEEccCCCC
Q 018022 267 DMTDGGADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQPG 309 (362)
Q Consensus 267 ~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~G~~~~~ 309 (362)
.+.+..||+|..+.|-. ..++++.+.|+|+ |+++.+-...+.
T Consensus 111 p~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~ 158 (233)
T PF01209_consen 111 PFPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPR 158 (233)
T ss_dssp -S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-S
T ss_pred cCCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCC
Confidence 11123699999877642 5688999999998 999888765433
No 382
>PLN03075 nicotianamine synthase; Provisional
Probab=94.89 E-value=0.2 Score=46.65 Aligned_cols=99 Identities=13% Similarity=0.109 Sum_probs=66.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhcC-----CcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
.++++|+-+|+|+.++.++.+++.+.. .+++.+|.+++..+.+++.- ...-+.... .|..+.... .++|
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~~--l~~F 196 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTES--LKEY 196 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhcccc--cCCc
Confidence 377899999999999988888875533 38999999999888887632 222122211 222221101 1379
Q ss_pred cEEEEcC------CC-HHHHHHHHHHhccCCceEEEEc
Q 018022 274 DYCFECV------GL-ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 274 d~vid~~------g~-~~~~~~~~~~l~~~~G~iv~~G 304 (362)
|+||-.+ .. ...++.+.+.|+++ |.+++-.
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 9999875 12 25578899999997 7776554
No 383
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.87 E-value=0.59 Score=36.90 Aligned_cols=89 Identities=19% Similarity=0.230 Sum_probs=62.4
Q ss_pred EEEEECCChHHHHHHHHHHHc--CCCEEEEEcCCchHHHH-HHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 204 TVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~--g~~~vi~~~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
+|.|+|.|.+|......++.. +.+.+-+.+++.++.+. .+++|.. ++ .++.+.+.+. .+|+|+.++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~~---~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLADE---DVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHHT---TESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHhh---cCCEEEEec
Confidence 578999999999887666655 45334466777777665 4568877 33 2344444322 699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 018022 281 GLASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
+.....+.+..+++. |.-+++-.
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred CCcchHHHHHHHHHc--CCEEEEEc
Confidence 998878888888888 46666643
No 384
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.87 E-value=0.17 Score=41.08 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=53.4
Q ss_pred EEEECC-ChHHHHHHHHHHHcC--CCEEEEEcCCchHH---HHHHhcCCcEEEcCCCCCCccHHHHHH------------
Q 018022 205 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKF---EIGKRFGVTEFVNSKNCGDKSVSQIII------------ 266 (362)
Q Consensus 205 vlI~Ga-g~~G~~a~~la~~~g--~~~vi~~~~~~~~~---~~~~~~g~~~vv~~~~~~~~~~~~~i~------------ 266 (362)
|.|+|+ |.+|..++.+.+... + +|++...+..-. +.+++|.+..++-.++ ...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v 75 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV 75 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence 578899 999999999999887 6 777766544432 3456788888776654 2223332
Q ss_pred --------hhcCC-CccEEEEcCCCHHHHHHHHHHhcc
Q 018022 267 --------DMTDG-GADYCFECVGLASLVQEAYACCRK 295 (362)
Q Consensus 267 --------~~~~~-g~d~vid~~g~~~~~~~~~~~l~~ 295 (362)
++... .+|+++.++-+-..+.-.+..++.
T Consensus 76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~ 113 (129)
T PF02670_consen 76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA 113 (129)
T ss_dssp EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT
T ss_pred EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC
Confidence 22222 567777666665556666666666
No 385
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.86 E-value=0.2 Score=45.38 Aligned_cols=81 Identities=19% Similarity=0.304 Sum_probs=49.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcC--CCcc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD 274 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g~d 274 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+++.+.. .+.+++.+.. +.+..+-.+.+++.+.+.+... +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3678999998 9999999999999999 88888765422 2333344432 1222221112333333333322 2689
Q ss_pred EEEEcCCC
Q 018022 275 YCFECVGL 282 (362)
Q Consensus 275 ~vid~~g~ 282 (362)
++|.+.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999884
No 386
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.84 E-value=0.16 Score=45.75 Aligned_cols=77 Identities=22% Similarity=0.387 Sum_probs=50.6
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+.. .++ |..+ .+++.+.+.++.. ++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence 57999998 9999999998888999 89999998877655443 2221 122 3222 2333333333321 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988864
No 387
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.83 E-value=0.11 Score=48.05 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=52.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH----HHHhcCC--cEEEcCCCCCCccHHHHHHhhcCC-
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG- 271 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~~g~--~~vv~~~~~~~~~~~~~i~~~~~~- 271 (362)
-.|+.|||+|+ +++|++.++=...+|+ +++..|.+.+-.+ ..++.|- .++.|-.+ .+++.+..++...+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc
Confidence 47899999988 8899887776667788 8888888876433 3344442 23444332 24444444443333
Q ss_pred -CccEEEEcCCC
Q 018022 272 -GADYCFECVGL 282 (362)
Q Consensus 272 -g~d~vid~~g~ 282 (362)
.+|++++.+|.
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 78999999885
No 388
>PRK08328 hypothetical protein; Provisional
Probab=94.81 E-value=0.16 Score=45.74 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
.+.+|+|+|+|++|..++..+.+.|+.+++.+|.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 34689999999999999999999999999998744
No 389
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.81 E-value=0.25 Score=46.02 Aligned_cols=71 Identities=21% Similarity=0.190 Sum_probs=51.7
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
+|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.... .+..+.+. ..|+||.|+...
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 37788999999988888888898 99999999999988887765321 12222222 478888888876
Q ss_pred HHHHH
Q 018022 284 SLVQE 288 (362)
Q Consensus 284 ~~~~~ 288 (362)
..+..
T Consensus 67 ~~~~~ 71 (291)
T TIGR01505 67 PQVEE 71 (291)
T ss_pred HHHHH
Confidence 43443
No 390
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.81 E-value=0.37 Score=40.59 Aligned_cols=89 Identities=20% Similarity=0.171 Sum_probs=56.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
.|.+|+|+|+|.+|..-++.+...|+ .|++++ ++..+.+.+++.-.. ..+. +.+. ++ .++|+||-++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~-----~~~~--dl--~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT-----FSND--DI--KDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc-----cChh--cC--CCceEEEECC
Confidence 56889999999999998888888999 777774 333334444442221 1111 1110 01 1689999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEc
Q 018022 281 GLASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~G 304 (362)
+.+. ++..+...+.. +.++...
T Consensus 79 ~d~e-~N~~i~~~a~~-~~~vn~~ 100 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD-FQWVNVV 100 (157)
T ss_pred CCHH-HHHHHHHHHHH-CCcEEEC
Confidence 9988 66655555554 3444443
No 391
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.80 E-value=0.18 Score=45.74 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=49.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|++++++ ++.+.+ .+.+.. .++..+-...+.+.+.+.+... +.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999999999999 88888876 333222 233322 2222211012233333333321 36
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 392
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.12 Score=45.87 Aligned_cols=73 Identities=19% Similarity=0.227 Sum_probs=49.1
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc-EEEcCCCCCCccHHHHHHhhcCC-CccEEEE
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFE 278 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~~i~~~~~~-g~d~vid 278 (362)
+.+++|+|+ |.+|...++.+...|+ +|++++++.++. .... ...|..+ .+.+.+.+.++... ++|++|.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEEE
Confidence 568999998 9999999999999998 899998876541 1111 1223222 23344444444333 6899999
Q ss_pred cCCC
Q 018022 279 CVGL 282 (362)
Q Consensus 279 ~~g~ 282 (362)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8884
No 393
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.76 E-value=0.22 Score=44.20 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=31.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
...+|+|+|+|++|...++.+.+.|+.+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34679999999999999999999999889999876
No 394
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.73 E-value=0.34 Score=45.20 Aligned_cols=72 Identities=17% Similarity=0.165 Sum_probs=52.1
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
+|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.... .++.+.+. ..|+||.|+...
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEeCCCH
Confidence 68899999999988888888898 89999999998888877765311 12222222 478999998866
Q ss_pred HHHHHH
Q 018022 284 SLVQEA 289 (362)
Q Consensus 284 ~~~~~~ 289 (362)
..+...
T Consensus 70 ~~~~~v 75 (296)
T PRK11559 70 PHVKEV 75 (296)
T ss_pred HHHHHH
Confidence 544433
No 395
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.73 E-value=0.43 Score=43.36 Aligned_cols=101 Identities=22% Similarity=0.310 Sum_probs=61.9
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~--~~~~~~-~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
.+.+++|+|+ +++|++.++.+...|+ +|+.++++. +..+.+ ++++.. +.+ |-.+ .+++.+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 82 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN--EEHLASLADRVREH 82 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC--HHHHHHHHHHHHHH
Confidence 4678999985 6899999998888999 888888653 333333 334321 122 2222 2233333333221
Q ss_pred -CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022 271 -GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 271 -~g~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
+.+|++|.+.|.. ...+.++..|+++ |+|+.++.
T Consensus 83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~-g~Iv~is~ 146 (256)
T PRK07889 83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEG-GSIVGLDF 146 (256)
T ss_pred cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccC-ceEEEEee
Confidence 3799999988742 0123456667776 89988764
No 396
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.73 E-value=0.26 Score=43.83 Aligned_cols=102 Identities=21% Similarity=0.271 Sum_probs=62.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HhcCCcEEEc-------CCCCCCcc-HHHHHHhhc
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVN-------SKNCGDKS-VSQIIIDMT 269 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~g~~~vv~-------~~~~~~~~-~~~~i~~~~ 269 (362)
+.++.+||+.|+|. |.-++-+|. +|. .|++++.++.-++.+ ++.+...... +.. ..-+ ....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~ 107 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRA-GNIEIFCGDFFALT 107 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeec-CceEEEEccCCCCC
Confidence 36778999999876 777777774 799 999999999888774 3333321000 000 0000 000011111
Q ss_pred ---CCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 018022 270 ---DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 270 ---~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
.+.||.++|+.-- ...++.+.+.|+++ |++.+++.
T Consensus 108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1268999997531 23477899999998 98777755
No 397
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.72 E-value=0.39 Score=43.29 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=67.3
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~ 268 (362)
....+..+..+||=+|.|. |..++.+++.++ ..+++.++.+++..+.+++ .|...-+.... .+..+.+.++
T Consensus 61 ~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l 136 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQL 136 (234)
T ss_pred HHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHH
Confidence 3455667788999888633 555566666553 3399999999988877754 45432222222 3344444444
Q ss_pred c----CCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEE
Q 018022 269 T----DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 269 ~----~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 303 (362)
. .+.||.||--...+ ..++.+++.++++ |.+++-
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 2 23799998765433 4467889999997 887753
No 398
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.69 E-value=0.23 Score=40.50 Aligned_cols=97 Identities=22% Similarity=0.244 Sum_probs=57.7
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-------------------HHH----HHHhcCC-cEEEcCCCCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KFE----IGKRFGV-TEFVNSKNCG 257 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-------------------~~~----~~~~~g~-~~vv~~~~~~ 257 (362)
..+|+|.|+|++|...+..+.+.|+.+++.+|.+.= |.+ .++++.. .++.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 468999999999999999999999989999875321 222 2223322 22221111
Q ss_pred CccH-HHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022 258 DKSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 258 ~~~~-~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G 304 (362)
.+ .+.+.++. .++|+||+|+........+.+.++.. +.-...+
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~ 123 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDA 123 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEE
Confidence 11 12222322 25899999999877555566666664 5544433
No 399
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.64 E-value=0.18 Score=44.13 Aligned_cols=99 Identities=12% Similarity=0.165 Sum_probs=59.8
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhh
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~ 268 (362)
+.+.....++.+||-+|+|. |..+..+++ .|. .|+++|.+++-++.+++ .+.. +.... .++.. . .+
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~~ 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-AL 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-cc
Confidence 34445555677899998855 666666665 477 99999999877766543 2332 11110 11110 0 11
Q ss_pred cCCCccEEEEcCC-----C---HHHHHHHHHHhccCCceEEEE
Q 018022 269 TDGGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 269 ~~~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~iv~~ 303 (362)
.+.+|+|+...- . ...++.+.+.|+++ |.++++
T Consensus 92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~ 132 (195)
T TIGR00477 92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV 132 (195)
T ss_pred -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence 236999986422 1 24577888999998 985554
No 400
>PRK11579 putative oxidoreductase; Provisional
Probab=94.62 E-value=1.3 Score=42.30 Aligned_cols=128 Identities=15% Similarity=0.073 Sum_probs=76.8
Q ss_pred CEEEEECCChHHH-HHHHHHH-HcCCCEEEE-EcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 018022 203 STVVIFGLGSIGL-AVAEGAR-LCGATRIIG-VDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (362)
Q Consensus 203 ~~vlI~Gag~~G~-~a~~la~-~~g~~~vi~-~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~ 279 (362)
-+|.|+|.|.+|. ..+...+ .-++ .+++ .+++.++.. .+++...+. .++.+.+. ...+|+|+.|
T Consensus 5 irvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~-------~~~~ell~---~~~vD~V~I~ 71 (346)
T PRK11579 5 IRVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKVK--ADWPTVTVV-------SEPQHLFN---DPNIDLIVIP 71 (346)
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHHH--hhCCCCcee-------CCHHHHhc---CCCCCEEEEc
Confidence 3789999999996 4455444 4467 5554 555544432 334322222 23333332 1279999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH------HH-HhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022 280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF------EV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS 352 (362)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~------~~-~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l 352 (362)
++.....+.+..++.. |+-|++-. ++..+.. .+ -.+++.+.-.+...+ ...++.+-+++++|.|
T Consensus 72 tp~~~H~~~~~~al~a--GkhVl~EK-----Pla~t~~ea~~l~~~a~~~g~~l~v~~~~R~--~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 72 TPNDTHFPLAKAALEA--GKHVVVDK-----PFTVTLSQARELDALAKSAGRVLSVFHNRRW--DSDFLTLKALLAEGVL 142 (346)
T ss_pred CCcHHHHHHHHHHHHC--CCeEEEeC-----CCCCCHHHHHHHHHHHHHhCCEEEEEeeccC--CHHHHHHHHHHhcCCC
Confidence 9998878899999988 57777743 2333332 12 234555543333222 3568888888888876
No 401
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=94.61 E-value=0.39 Score=44.50 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=66.2
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 282 (362)
+|.++|.|.+|.-.++=+...|+ .+.+.+++.++ .++++..|+...- +..+.+. ..|+||-+++.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~-----~aDvVitmv~~ 67 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA-----EADVVITMLPD 67 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH-----hCCEEEEecCC
Confidence 57888999999999999999999 99999999999 8888888876432 2233333 48999999998
Q ss_pred HHHHHHHH-------HHhccCCceEEEEccC
Q 018022 283 ASLVQEAY-------ACCRKGWGKTIVLGVD 306 (362)
Q Consensus 283 ~~~~~~~~-------~~l~~~~G~iv~~G~~ 306 (362)
...++..+ ..++++ ..++.++..
T Consensus 68 ~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi 97 (286)
T COG2084 68 DAAVRAVLFGENGLLEGLKPG-AIVIDMSTI 97 (286)
T ss_pred HHHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence 86666554 334565 677777654
No 402
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.61 E-value=0.21 Score=48.69 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=62.5
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHH-------HHHhc-CCcEE-EcCCCCCCccHHHHHHh
Q 018022 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSVSQIIID 267 (362)
Q Consensus 198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~-------~~~~~-g~~~v-v~~~~~~~~~~~~~i~~ 267 (362)
+-..+.+|||+|+ |.+|..+++.+...|+ +|++++++..+.+ ..... +...+ .|..+ .+.+.+.+.+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~ 132 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFS 132 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHH
Confidence 4456779999998 9999999999988999 8999998775432 11122 22222 23222 1233333332
Q ss_pred hcCCCccEEEEcCCCH------------HHHHHHHHHhccC-CceEEEEccC
Q 018022 268 MTDGGADYCFECVGLA------------SLVQEAYACCRKG-WGKTIVLGVD 306 (362)
Q Consensus 268 ~~~~g~d~vid~~g~~------------~~~~~~~~~l~~~-~G~iv~~G~~ 306 (362)
. +.++|+||.|.+.. .....+++.++.. -++++.++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 2 11699999988742 1122344555443 1368887653
No 403
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.58 E-value=0.55 Score=43.06 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=66.8
Q ss_pred HhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHhc-C------Cc--EEEcCCCCCCccHHHH
Q 018022 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF-G------VT--EFVNSKNCGDKSVSQI 264 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~-g------~~--~vv~~~~~~~~~~~~~ 264 (362)
+...++++++||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++- . .+ .++..+. .++
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l--- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL--- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence 445778899999999865 5566777777653 3999999999988877542 1 11 1222111 111
Q ss_pred HHhhcCCCccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEEccC
Q 018022 265 IIDMTDGGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 265 i~~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.+.++.||.|+-..+ . ...++++.+.|+++ |+++++-..
T Consensus 140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~ 184 (261)
T PLN02233 140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN 184 (261)
T ss_pred --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence 111226999986433 1 25578999999998 999887553
No 404
>PRK07069 short chain dehydrogenase; Validated
Probab=94.58 E-value=0.42 Score=42.86 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=47.4
Q ss_pred EEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC-chHHHHHH-hc----CCcE--EE--cCCCCCCccHHHHHHhhcC--C
Q 018022 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGK-RF----GVTE--FV--NSKNCGDKSVSQIIIDMTD--G 271 (362)
Q Consensus 205 vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~-~~~~~~~~-~~----g~~~--vv--~~~~~~~~~~~~~i~~~~~--~ 271 (362)
++|+|+ |.+|...++.+...|+ +|++++++ .++++.+. ++ +... .+ |-.+ .+.+.+.+.+... +
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAMG 78 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 789987 9999999999888999 89999887 55554432 22 1111 12 3222 2334343333321 3
Q ss_pred CccEEEEcCCC
Q 018022 272 GADYCFECVGL 282 (362)
Q Consensus 272 g~d~vid~~g~ 282 (362)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (251)
T PRK07069 79 GLSVLVNNAGV 89 (251)
T ss_pred CccEEEECCCc
Confidence 68999999874
No 405
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.57 E-value=0.11 Score=43.02 Aligned_cols=94 Identities=19% Similarity=0.149 Sum_probs=56.0
Q ss_pred EEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC---CCccHHHHHHhhcCCCccEEEEcCC
Q 018022 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC---GDKSVSQIIIDMTDGGADYCFECVG 281 (362)
Q Consensus 205 vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~---~~~~~~~~i~~~~~~g~d~vid~~g 281 (362)
|+|.|+|.+|...+..++..|. .|..+.+.+ +.+.+++-|........+. ........ ....+.+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999988888877998 899999877 7777776554321111000 00000000 111127999999987
Q ss_pred CHH---HHHHHHHHhccCCceEEEE
Q 018022 282 LAS---LVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 282 ~~~---~~~~~~~~l~~~~G~iv~~ 303 (362)
... .++.+...+.++ ..++++
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~ 100 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSL 100 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEE
T ss_pred ccchHHHHHHHhhccCCC-cEEEEE
Confidence 654 334444455554 566666
No 406
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.56 E-value=1.2 Score=41.54 Aligned_cols=111 Identities=21% Similarity=0.221 Sum_probs=71.5
Q ss_pred HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEc--CCchHHHHHHhcCCcEEEcCCCCC-Ccc-----------
Q 018022 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD--VISEKFEIGKRFGVTEFVNSKNCG-DKS----------- 260 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~--~~~~~~~~~~~~g~~~vv~~~~~~-~~~----------- 260 (362)
....+++|.+|+=-=+|.+|.+.+.+|+++|++.+++.. -+.+|.++++.+|+.-+..+...+ ...
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~ 134 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAE 134 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHh
Confidence 444589999443333599999999999999995555543 345788888889887655443210 011
Q ss_pred -----------------------HHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 018022 261 -----------------------VSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 261 -----------------------~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
....|.+.+++.+|+++-.+|+..++.-.-+.|+..+..+-.++.
T Consensus 135 ~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~v 202 (300)
T COG0031 135 IPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAV 202 (300)
T ss_pred CCCceEchhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEE
Confidence 112222333345899999988887777777777776444555554
No 407
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.56 E-value=0.1 Score=47.33 Aligned_cols=105 Identities=17% Similarity=0.226 Sum_probs=67.4
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHh----cCCcE---EEcCCCCCCccHH-H
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE---FVNSKNCGDKSVS-Q 263 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~-~ 263 (362)
+...+++.||++|+=.|.|. |.++..+++..|. .+|+..+.++++.+.+++ .|... +.+.+ +. +
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D------v~~~ 104 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD------VCEE 104 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-------GGCG
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc------eecc
Confidence 45678999999999887654 6666677776653 399999999999888764 45532 22211 11 1
Q ss_pred HHHhhcCCCccEEEEcCCCH-HHHHHHHHHh-ccCCceEEEEcc
Q 018022 264 IIIDMTDGGADYCFECVGLA-SLVQEAYACC-RKGWGKTIVLGV 305 (362)
Q Consensus 264 ~i~~~~~~g~d~vid~~g~~-~~~~~~~~~l-~~~~G~iv~~G~ 305 (362)
...+-....+|.||=-.+.+ ..+..+.+.| +++ |+++.+.-
T Consensus 105 g~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 105 GFDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp --STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 11111112689988877777 4688999999 897 99999954
No 408
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.56 E-value=0.71 Score=39.99 Aligned_cols=86 Identities=20% Similarity=0.239 Sum_probs=53.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 282 (362)
+++|+|+ |++|.+.+..+... . +|++++++.. ....|-.+ .+++.+.+.++ +++|++|.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG----------DVQVDITD--PASIRALFEKV--GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC----------ceEecCCC--hHHHHHHHHhc--CCCCEEEECCCC
Confidence 5899998 99999888777666 6 8999887653 11223222 12233333322 368888888874
Q ss_pred H-------------------------HHHHHHHHHhccCCceEEEEccC
Q 018022 283 A-------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 283 ~-------------------------~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
. ...+.+.+.++++ |++++++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~iss~ 113 (199)
T PRK07578 66 VHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-GSFTLTSGI 113 (199)
T ss_pred CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEccc
Confidence 1 1233445566676 899988753
No 409
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.53 E-value=0.49 Score=44.71 Aligned_cols=112 Identities=10% Similarity=-0.003 Sum_probs=68.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHHH-hc---CCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGK-RF---GVTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~~-~~---g~~~vv~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
-....+++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+.+. ++ |.. +... .+..+.++ ..
T Consensus 122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av~-----~a 190 (314)
T PRK06141 122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAVR-----QA 190 (314)
T ss_pred CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHHh-----cC
Confidence 356788999999999999876444 467779999999988866543 33 322 1111 12333332 58
Q ss_pred cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 018022 274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (362)
Q Consensus 274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 325 (362)
|+|+.+++.+..+- -...++++ -.+..+|.+. ...-+++.. ++.+...
T Consensus 191 DIVi~aT~s~~pvl-~~~~l~~g-~~i~~ig~~~-~~~~El~~~-~~~~a~~ 238 (314)
T PRK06141 191 DIISCATLSTEPLV-RGEWLKPG-THLDLVGNFT-PDMRECDDE-AIRRASV 238 (314)
T ss_pred CEEEEeeCCCCCEe-cHHHcCCC-CEEEeeCCCC-cccccCCHH-HHhcCcE
Confidence 99999988763211 12567885 5556666543 233455543 4444433
No 410
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=94.52 E-value=0.47 Score=42.21 Aligned_cols=111 Identities=17% Similarity=0.223 Sum_probs=66.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC----cEEE--cCCCCCCccHHHHHHhhcC--CC
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV----TEFV--NSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~----~~vv--~~~~~~~~~~~~~i~~~~~--~g 272 (362)
|.+++++|+ |++|++....+...|+ .+.++.-+.|+.+...++.+ ..++ ..+--+-.++.+..++... +.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 788999976 9999999999999999 77777666776666555432 2222 1211001334444444332 25
Q ss_pred ccEEEEcCCCH-----------------HHHHHHHHHhc-----cCCceEEEEccCCCCCcccc
Q 018022 273 ADYCFECVGLA-----------------SLVQEAYACCR-----KGWGKTIVLGVDQPGSQLSL 314 (362)
Q Consensus 273 ~d~vid~~g~~-----------------~~~~~~~~~l~-----~~~G~iv~~G~~~~~~~~~~ 314 (362)
.|++|+-.|.- .....+++++. ++ |.|+.++...+-.+.+.
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~G-GiIvNmsSv~GL~P~p~ 146 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKG-GIIVNMSSVAGLDPMPV 146 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCC-cEEEEeccccccCcccc
Confidence 89999977742 12333444443 44 88998876544333333
No 411
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.51 E-value=0.29 Score=45.45 Aligned_cols=80 Identities=23% Similarity=0.333 Sum_probs=58.5
Q ss_pred CCCCEEEEECC-ChHHHH-HHHHHHHcCCCEEEEEcCCchHHHHHHh-----cCC---cEEEcCCCCCCccHHHHHHhhc
Q 018022 200 EVGSTVVIFGL-GSIGLA-VAEGARLCGATRIIGVDVISEKFEIGKR-----FGV---TEFVNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~-a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~g~---~~vv~~~~~~~~~~~~~i~~~~ 269 (362)
+.|++.+|+|+ .++|.+ +-++|+ +|. +|+.++|+.+|++..++ .++ ..++|..+ +....+.+++..
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~--~~~~ye~i~~~l 122 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK--GDEVYEKLLEKL 122 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC--CchhHHHHHHHh
Confidence 45788999999 889987 555665 999 89999999999877543 343 23567665 122466677766
Q ss_pred CC-CccEEEEcCCCH
Q 018022 270 DG-GADYCFECVGLA 283 (362)
Q Consensus 270 ~~-g~d~vid~~g~~ 283 (362)
.+ .+-+.++++|..
T Consensus 123 ~~~~VgILVNNvG~~ 137 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMS 137 (312)
T ss_pred cCCceEEEEeccccc
Confidence 66 888999999863
No 412
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.51 E-value=0.25 Score=45.06 Aligned_cols=81 Identities=22% Similarity=0.322 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
.+.+++|+|+ +.+|.+.+..+...|+ +|+.++++.++++.+. +.+... .+..+-.+.+.+.+.+.+... +.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5678999998 9999998888888999 8888888887664432 234322 222211012233333333221 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 413
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.49 E-value=0.39 Score=44.80 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=31.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (362)
.+.+++|+|+|+.+.+++..+...|+++++++.|+.+
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5678999999999998777777889989999999853
No 414
>PLN00016 RNA-binding protein; Provisional
Probab=94.49 E-value=0.36 Score=46.73 Aligned_cols=95 Identities=16% Similarity=0.123 Sum_probs=60.5
Q ss_pred CCEEEEE----CC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-----------HHhcCCcEEEcCCCCCCccHHHHH
Q 018022 202 GSTVVIF----GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-----------GKRFGVTEFVNSKNCGDKSVSQII 265 (362)
Q Consensus 202 g~~vlI~----Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-----------~~~~g~~~vv~~~~~~~~~~~~~i 265 (362)
..+|||+ |+ |.+|...+..+...|+ .|++++++...... +...+...+. .|+.+ +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-~ 122 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-V 122 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-H
Confidence 3679999 98 9999999999888998 99999887654321 1223433322 12222 3
Q ss_pred HhhcCC-CccEEEEcCCCH-HHHHHHHHHhccCC-ceEEEEcc
Q 018022 266 IDMTDG-GADYCFECVGLA-SLVQEAYACCRKGW-GKTIVLGV 305 (362)
Q Consensus 266 ~~~~~~-g~d~vid~~g~~-~~~~~~~~~l~~~~-G~iv~~G~ 305 (362)
.+.... ++|+||++.+.. .....+++.++..+ .++++++.
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 333233 799999998754 22445666666431 26887764
No 415
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.48 E-value=0.23 Score=45.62 Aligned_cols=81 Identities=17% Similarity=0.036 Sum_probs=50.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCcE-EEcCCCCCCccHHHHHHhhc--CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~~-vv~~~~~~~~~~~~~i~~~~--~~g 272 (362)
+..+++|+|+ |.+|.+.++.+...|+ +|+++.++.++.+.+. ..+... ++..+-.+.+.+.+.+.+.. -++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3458999998 9999999998888999 8888888776654332 223322 22222111233333333321 136
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 416
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=94.47 E-value=0.77 Score=40.91 Aligned_cols=79 Identities=15% Similarity=0.239 Sum_probs=47.0
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcC---Cc-EEEcCCCCCCccHHHHHHhhcC--CCc
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFG---VT-EFVNSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g---~~-~vv~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
.++||+|+ |.+|..+++.+...|+ +|+.++++.+ ..+...... .. .++..+-...+.+.+.+.+... +.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899987 9999999998888898 9999988743 112222222 11 1222221011233333333321 269
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12824 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999998874
No 417
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.46 E-value=0.26 Score=50.39 Aligned_cols=94 Identities=11% Similarity=0.118 Sum_probs=65.4
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCC
Q 018022 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (362)
Q Consensus 203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~ 282 (362)
++++|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...+.- +. .-.+.+++.-=+.+|.++-++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~----~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NA----ANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CC----CCHHHHHhcCccccCEEEEEcCC
Confidence 678999999999999999999999 9999999999999999988665443 22 11333433322278988888776
Q ss_pred HHHH---HHHHHHhccCCceEEEE
Q 018022 283 ASLV---QEAYACCRKGWGKTIVL 303 (362)
Q Consensus 283 ~~~~---~~~~~~l~~~~G~iv~~ 303 (362)
+..- -...+...+. -+++.-
T Consensus 492 ~~~~~~iv~~~~~~~~~-~~iiar 514 (558)
T PRK10669 492 GYEAGEIVASAREKRPD-IEIIAR 514 (558)
T ss_pred hHHHHHHHHHHHHHCCC-CeEEEE
Confidence 5322 2333444444 555554
No 418
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.43 E-value=0.52 Score=42.89 Aligned_cols=99 Identities=20% Similarity=0.192 Sum_probs=67.0
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcC-C
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTD-G 271 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~-~ 271 (362)
.....+.++++||=+|+|. |..+..+++..+..+|++++.++..++.+++.-. ..++..+ .. ++.. .
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~~----~~~~~~ 92 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------IA----SWQPPQ 92 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------hh----ccCCCC
Confidence 4556678889999999865 6667777777644499999999998888876421 2233222 11 1112 2
Q ss_pred CccEEEEcCCC------HHHHHHHHHHhccCCceEEEEc
Q 018022 272 GADYCFECVGL------ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 272 g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G 304 (362)
.+|+|+....- ...+..+.+.|+++ |.+++..
T Consensus 93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 78999865442 24578899999998 9988753
No 419
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.41 E-value=0.18 Score=45.40 Aligned_cols=84 Identities=19% Similarity=0.230 Sum_probs=52.8
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc--EEE--cCCCCCCccHHHHHHhh
Q 018022 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EFV--NSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~--~vv--~~~~~~~~~~~~~i~~~ 268 (362)
+.-++.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+.. .++ +-+.....++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3457889999998 9999999988888899 999999887765433 233322 122 22110112333333333
Q ss_pred cC--CCccEEEEcCCC
Q 018022 269 TD--GGADYCFECVGL 282 (362)
Q Consensus 269 ~~--~g~d~vid~~g~ 282 (362)
.. +.+|++|.+.|.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 268999998864
No 420
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.40 E-value=0.32 Score=45.05 Aligned_cols=80 Identities=21% Similarity=0.238 Sum_probs=49.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc---------hHHHH-HH---hcCCcE-EE--cCCCCCCccHH
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEI-GK---RFGVTE-FV--NSKNCGDKSVS 262 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~---------~~~~~-~~---~~g~~~-vv--~~~~~~~~~~~ 262 (362)
-.+.++||+|+ +++|.+.++.+...|+ +|++++++. ++++. ++ +.+... ++ |-.+ .+++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~ 80 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD--WDGAA 80 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC--HHHHH
Confidence 35789999998 9999999998888999 888887654 33322 22 223322 22 2222 23333
Q ss_pred HHHHhhcC--CCccEEEEcCCC
Q 018022 263 QIIIDMTD--GGADYCFECVGL 282 (362)
Q Consensus 263 ~~i~~~~~--~g~d~vid~~g~ 282 (362)
+.+.+... +.+|++|.+.|.
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCC
Confidence 33333321 379999999885
No 421
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.39 E-value=0.49 Score=40.61 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=29.6
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~ 236 (362)
+|+|+|+|++|...++.+.+.|+.+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899998765
No 422
>PRK01581 speE spermidine synthase; Validated
Probab=94.39 E-value=0.96 Score=43.42 Aligned_cols=98 Identities=14% Similarity=0.078 Sum_probs=66.7
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-C----------cE--EEcCCCCCCccHHHHH
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V----------TE--FVNSKNCGDKSVSQII 265 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~----------~~--vv~~~~~~~~~~~~~i 265 (362)
.....+|||+|+| .|.++..+++..+.++|++++.+++-.+.++++. . .. ++. .|..+.+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL 220 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL 220 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence 3455799999975 4667777777666679999999999999988621 0 11 121 2334444
Q ss_pred HhhcCCCccEEEEcCCCH-----------HHHHHHHHHhccCCceEEEEcc
Q 018022 266 IDMTDGGADYCFECVGLA-----------SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 266 ~~~~~~g~d~vid~~g~~-----------~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
.+ ..+.||+||--...+ ..++.+.+.|+++ |.++.-..
T Consensus 221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 43 233799998765432 3567889999998 99887654
No 423
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.39 E-value=0.18 Score=46.57 Aligned_cols=80 Identities=19% Similarity=0.243 Sum_probs=54.1
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc------EEEcCCCCCCcc---HHHHH
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNCGDKS---VSQII 265 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~------~vv~~~~~~~~~---~~~~i 265 (362)
-.|.++||+|+ .++|.+.+..+...|+ +|+.+++++++.+...+ .+.. .+.|-.+ +++ +.+..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~ 82 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA 82 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence 35788999987 9999999999999999 99999999988765442 2332 1223222 122 22223
Q ss_pred HhhcCCCccEEEEcCCC
Q 018022 266 IDMTDGGADYCFECVGL 282 (362)
Q Consensus 266 ~~~~~~g~d~vid~~g~ 282 (362)
.+...|+.|+.++..|.
T Consensus 83 ~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 33333479999998875
No 424
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.38 E-value=0.37 Score=43.20 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=55.5
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh--cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~--~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 281 (362)
+++|.|+|.+|...++.+...|. .|++++.++++.+...+ .... ++.-+. .-.+.++++--..+|+++-++|
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 57899999999999999999999 99999999999877433 5543 333322 1234555542227999999999
Q ss_pred CHH
Q 018022 282 LAS 284 (362)
Q Consensus 282 ~~~ 284 (362)
...
T Consensus 76 ~d~ 78 (225)
T COG0569 76 NDE 78 (225)
T ss_pred CCH
Confidence 864
No 425
>PLN02928 oxidoreductase family protein
Probab=94.37 E-value=0.25 Score=47.35 Aligned_cols=35 Identities=31% Similarity=0.566 Sum_probs=32.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~ 236 (362)
.|.++.|+|.|.+|..+++.++.+|. +|++.+++.
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW 192 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence 47899999999999999999999999 999998763
No 426
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.35 E-value=0.14 Score=44.99 Aligned_cols=34 Identities=38% Similarity=0.473 Sum_probs=30.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
..+|+|.|+|++|...++.+.+.|+.+++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4679999999999999999999999889999877
No 427
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.34 E-value=0.65 Score=43.52 Aligned_cols=44 Identities=27% Similarity=0.338 Sum_probs=37.6
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCc
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~ 248 (362)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~ 45 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT 45 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence 57889999999988888888898 899999999998888777653
No 428
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.34 E-value=0.55 Score=44.24 Aligned_cols=86 Identities=26% Similarity=0.308 Sum_probs=60.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
.|.+|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|+. +. ++.+.++ ..|+|+-++
T Consensus 15 kgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaak-----~ADVV~llL 79 (335)
T PRK13403 15 QGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAVR-----TAQVVQMLL 79 (335)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHHh-----cCCEEEEeC
Confidence 57899999999999999999999999 887776655555666666763 21 2333333 489999999
Q ss_pred CCHH---HH-HHHHHHhccCCceEEEE
Q 018022 281 GLAS---LV-QEAYACCRKGWGKTIVL 303 (362)
Q Consensus 281 g~~~---~~-~~~~~~l~~~~G~iv~~ 303 (362)
+.+. .+ ...+..|+++ .++.+
T Consensus 80 Pd~~t~~V~~~eil~~MK~G--aiL~f 104 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREG--QMLLF 104 (335)
T ss_pred CChHHHHHHHHHHHhcCCCC--CEEEE
Confidence 8653 22 2466777874 44444
No 429
>PLN02476 O-methyltransferase
Probab=94.34 E-value=0.52 Score=43.59 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=68.6
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDM 268 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~ 268 (362)
....+.....+||=+|.+ +|..++.+|+.++. .+|+.++.+++..+.++ ++|...-+.-.. .+..+.+.++
T Consensus 111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l 186 (278)
T PLN02476 111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSM 186 (278)
T ss_pred HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHH
Confidence 345566778899998863 36666667776532 27999999999888775 456643222222 3344455443
Q ss_pred c----CCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEE
Q 018022 269 T----DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 269 ~----~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 303 (362)
. .+.||.||--.... ..++.+++.++++ |.++.=
T Consensus 187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 2 23799998877654 4467889999997 887754
No 430
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.32 E-value=0.57 Score=44.00 Aligned_cols=39 Identities=26% Similarity=0.378 Sum_probs=30.8
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH
Q 018022 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (362)
Q Consensus 201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~ 241 (362)
.|.++||+|+ .++|.+.++.+...|+ +|+. .++..+++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l~~ 49 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPALNI 49 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchhhH
Confidence 4789999988 7899999999999999 7777 445444433
No 431
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.24 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=30.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
.+.++||+|+ +++|+++++.+...|+ +|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4679999998 8999999999999999 88888876
No 432
>PRK04457 spermidine synthase; Provisional
Probab=94.32 E-value=0.58 Score=42.99 Aligned_cols=95 Identities=13% Similarity=0.121 Sum_probs=65.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC----c--EEEcCCCCCCccHHHHHHhhcCCC
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSVSQIIIDMTDGG 272 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~----~--~vv~~~~~~~~~~~~~i~~~~~~g 272 (362)
.++.+||++|.|. |..+..+++.....++++++.+++-.+.+++. +. + +++. .|..+.+.+. .+.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4567899999875 77777787776544999999999999998863 32 1 2332 2344444432 237
Q ss_pred ccEEEEcC-C-C--------HHHHHHHHHHhccCCceEEEE
Q 018022 273 ADYCFECV-G-L--------ASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 273 ~d~vid~~-g-~--------~~~~~~~~~~l~~~~G~iv~~ 303 (362)
+|+|+--. . . ...++.+.+.|+++ |.++.-
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 99988421 1 1 36688999999998 998863
No 433
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.32 E-value=0.31 Score=46.86 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=32.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~ 236 (362)
...+|+|+|+|++|..++..+.+.|+.+++.+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 347899999999999999999999999999998654
No 434
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=94.32 E-value=0.22 Score=47.12 Aligned_cols=102 Identities=19% Similarity=0.231 Sum_probs=74.5
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
+=+|.+++|.|=|-+|.-.++.++.+|+ +|+++..++-+.-.+.--|+. |.. ..++.. -.|++|-
T Consensus 206 liaGK~vVV~GYG~vGrG~A~~~rg~GA-~ViVtEvDPI~AleA~MdGf~-V~~--------m~~Aa~-----~gDifiT 270 (420)
T COG0499 206 LLAGKNVVVAGYGWVGRGIAMRLRGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAAK-----TGDIFVT 270 (420)
T ss_pred eecCceEEEecccccchHHHHHhhcCCC-eEEEEecCchHHHHHhhcCcE-EEE--------hHHhhh-----cCCEEEE
Confidence 4588999999999999999999999999 999999888776666555654 332 112221 3699999
Q ss_pred cCCCHHHHH-HHHHHhccCCceEEEEccCCCCCccccCHHHHH
Q 018022 279 CVGLASLVQ-EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL 320 (362)
Q Consensus 279 ~~g~~~~~~-~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~ 320 (362)
++|+...+. .-+..|+.+ ..+...|. .+.+++...+-
T Consensus 271 ~TGnkdVi~~eh~~~MkDg-aIl~N~GH----Fd~EI~~~~L~ 308 (420)
T COG0499 271 ATGNKDVIRKEHFEKMKDG-AILANAGH----FDVEIDVAGLE 308 (420)
T ss_pred ccCCcCccCHHHHHhccCC-eEEecccc----cceeccHHHHH
Confidence 999998665 667778886 56666664 45566665543
No 435
>PRK07041 short chain dehydrogenase; Provisional
Probab=94.29 E-value=0.75 Score=40.67 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=46.8
Q ss_pred EEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-c--CC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 206 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 206 lI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+ + +. .+++..+-....++.+.+.+. +.+|++|.+.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 57888 9999999998888999 89999998776654332 2 22 223322210123333333322 3689999998
Q ss_pred CC
Q 018022 281 GL 282 (362)
Q Consensus 281 g~ 282 (362)
|.
T Consensus 78 g~ 79 (230)
T PRK07041 78 AD 79 (230)
T ss_pred CC
Confidence 74
No 436
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.28 E-value=0.49 Score=46.51 Aligned_cols=73 Identities=26% Similarity=0.361 Sum_probs=52.3
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhh---------cCC-C
Q 018022 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---------TDG-G 272 (362)
Q Consensus 203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~---------~~~-g 272 (362)
.+|.|+|.|.+|+..+..+...|+ .|+++++++++.+.++. |...+. + +.+.+.+++. +.. .
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~~---e---~~l~~~l~~~~~~g~l~~~~~~~~ 75 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHIV---E---PDLDMVVKTAVEGGYLRATTTPEP 75 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCcC---C---CCHHHHHHHHhhcCceeeeccccc
Confidence 468999999999999888888898 99999999999887654 322211 2 3344443321 111 5
Q ss_pred ccEEEEcCCCH
Q 018022 273 ADYCFECVGLA 283 (362)
Q Consensus 273 ~d~vid~~g~~ 283 (362)
.|++|-|++.+
T Consensus 76 aDvvii~vptp 86 (415)
T PRK11064 76 ADAFLIAVPTP 86 (415)
T ss_pred CCEEEEEcCCC
Confidence 89999999985
No 437
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.26 E-value=0.18 Score=44.52 Aligned_cols=97 Identities=19% Similarity=0.217 Sum_probs=64.1
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~ 267 (362)
....+++++++||-+|+|. |..+..+++.. . ++++++.+++..+.+++ .+... ++..+. .+ .
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~---~ 138 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG------WK---G 138 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc------cc---C
Confidence 4567889999999998855 55555566553 3 89999998887766543 34432 222211 11 1
Q ss_pred hcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022 268 MTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 268 ~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
... +.||.|+...........+.+.|+++ |++++.
T Consensus 139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 111 37999988766666567888999997 998765
No 438
>PLN02256 arogenate dehydrogenase
Probab=94.26 E-value=0.79 Score=43.08 Aligned_cols=97 Identities=12% Similarity=0.149 Sum_probs=60.8
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCC
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG 272 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g 272 (362)
+.+...-..+.+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+.. . .+..+.+. ..
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~~----~~ 92 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFCE----EH 92 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHhh----CC
Confidence 3455555566789999999999998888888887 8999988764 45566677532 1 11222211 14
Q ss_pred ccEEEEcCCCHHHHHHHHHH-----hccCCceEEEEcc
Q 018022 273 ADYCFECVGLASLVQEAYAC-----CRKGWGKTIVLGV 305 (362)
Q Consensus 273 ~d~vid~~g~~~~~~~~~~~-----l~~~~G~iv~~G~ 305 (362)
.|+||-|+.... +...+.. ++++ ..++.++.
T Consensus 93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 688888877553 3333332 3454 55556654
No 439
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.25 E-value=0.27 Score=49.18 Aligned_cols=70 Identities=27% Similarity=0.304 Sum_probs=50.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch-----HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~-----~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~ 275 (362)
.+.+|+|+|+|.+|+.++.+++.+|+ .|++++..+. ..+.+++.|+........ . . ...+|.
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~--------~-~~~~D~ 81 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T--------L-PEDTDL 81 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c--------c-cCCCCE
Confidence 46789999999999999999999999 8988886542 234566778765443322 1 0 115899
Q ss_pred EEEcCCCH
Q 018022 276 CFECVGLA 283 (362)
Q Consensus 276 vid~~g~~ 283 (362)
||.+.|.+
T Consensus 82 Vv~s~Gi~ 89 (480)
T PRK01438 82 VVTSPGWR 89 (480)
T ss_pred EEECCCcC
Confidence 99988875
No 440
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.25 E-value=0.38 Score=43.13 Aligned_cols=78 Identities=19% Similarity=0.155 Sum_probs=49.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY 275 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~~~~g~d~ 275 (362)
.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+.. +++..+-.+.+++.+.+.+.. ..+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCE
Confidence 47899998 9999999999989999 89999998877654322 1111 222222101233333333322 25799
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
++.+.|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988774
No 441
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.25 E-value=0.2 Score=45.37 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=47.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
++.++||+|+ |.+|...++.+...|+ +|++++++.++. . .-.... ..|-.+ .+.+.+.+.++.. +++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 9999999999988999 899998875432 1 111111 122222 1222222222221 268999
Q ss_pred EEcCC
Q 018022 277 FECVG 281 (362)
Q Consensus 277 id~~g 281 (362)
|.+.|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99988
No 442
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.24 E-value=0.32 Score=50.44 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=65.5
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 281 (362)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+. -+. .-.+.+++.--..+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA----TRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC----CCHHHHHhcCCCcCCEEEEEeC
Confidence 3679999999999999999999999 999999999999999998875433 222 1123333322127999999999
Q ss_pred CHHHHHH---HHHHhccCCceEEE
Q 018022 282 LASLVQE---AYACCRKGWGKTIV 302 (362)
Q Consensus 282 ~~~~~~~---~~~~l~~~~G~iv~ 302 (362)
++..-.. ..+.+.++ -+++.
T Consensus 474 d~~~n~~i~~~ar~~~p~-~~iia 496 (621)
T PRK03562 474 DPQTSLQLVELVKEHFPH-LQIIA 496 (621)
T ss_pred CHHHHHHHHHHHHHhCCC-CeEEE
Confidence 8753323 33334443 45544
No 443
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.24 E-value=0.22 Score=46.16 Aligned_cols=133 Identities=18% Similarity=0.184 Sum_probs=89.3
Q ss_pred hcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCC--------CCccHHHHHHh
Q 018022 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC--------GDKSVSQIIID 267 (362)
Q Consensus 196 ~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~--------~~~~~~~~i~~ 267 (362)
.++..++.++++.|+|.+|+.++..++..|+ .|...+....+.+..+++|+..+-..+++ -.++|..+-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 4455677889999999999999999999999 99999988889888888887532211221 11234433333
Q ss_pred hcCC---CccEEEEcCCCH------HHHHHHHHHhccCCceEEEEccCCCC-CccccCHHHHHhcCcEEEEee
Q 018022 268 MTDG---GADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQPG-SQLSLSSFEVLHSGKILMGSL 330 (362)
Q Consensus 268 ~~~~---g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i~g~~ 330 (362)
+..+ ++|+||-+.=.+ .........|+++ +.++.+....++ -....+-.....++.+|.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 3322 799999865332 3345889999998 999988653322 222222223344578888864
No 444
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.23 E-value=0.3 Score=47.80 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=49.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi 277 (362)
.+.+++|+|+ |++|.+.+..+...|+ +|+++++++++++... ..+. ...+..+- .+ .+.+.+.. +++|++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv---sd-~~~v~~~l-~~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV---GQ-EAALAELL-EKVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC---CC-HHHHHHHh-CCCCEEE
Confidence 4679999998 9999999998888999 9999988876654322 1111 12222211 11 22333333 2699999
Q ss_pred EcCCC
Q 018022 278 ECVGL 282 (362)
Q Consensus 278 d~~g~ 282 (362)
.+.|.
T Consensus 251 nnAGi 255 (406)
T PRK07424 251 INHGI 255 (406)
T ss_pred ECCCc
Confidence 98774
No 445
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.23 E-value=0.21 Score=46.11 Aligned_cols=71 Identities=20% Similarity=0.068 Sum_probs=51.4
Q ss_pred cCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-hcCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (362)
Q Consensus 197 ~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~ 275 (362)
.+...+.+++|+|+|+.+++++..++..|+.+|+++.|+.+|.+.+. .++.. +.+.+ ....+|+
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~---~~~~~dl 181 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDL---GGIEADI 181 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhc---ccccCCE
Confidence 34555678999999999999999999999988999999998877654 34311 00011 1125899
Q ss_pred EEEcCCC
Q 018022 276 CFECVGL 282 (362)
Q Consensus 276 vid~~g~ 282 (362)
||+|+..
T Consensus 182 vINaTp~ 188 (272)
T PRK12550 182 LVNVTPI 188 (272)
T ss_pred EEECCcc
Confidence 9999864
No 446
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.22 E-value=1.3 Score=38.12 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=32.2
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~ 243 (362)
+|.|+|+|.+|...+.++...|+ +|+..+.+++.++.++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence 58899999999999999988899 9999999998776543
No 447
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.21 E-value=0.49 Score=45.02 Aligned_cols=37 Identities=38% Similarity=0.390 Sum_probs=33.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchH
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~ 238 (362)
.|.+|.|+|.|.+|...++.++..|. +|++.+++.+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~ 181 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK 181 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence 56789999999999999999999999 99999987654
No 448
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.20 E-value=0.72 Score=43.15 Aligned_cols=90 Identities=20% Similarity=0.345 Sum_probs=58.4
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
+|.++|.|.+|...+.-+...|. +|++.+++.++.+.+.+.|... . .+..+.+.+.. ..|+||-|+...
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~~-~-------~s~~~~~~~~~--~advVi~~vp~~ 70 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGITA-R-------HSLEELVSKLE--APRTIWVMVPAG 70 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-c-------CCHHHHHHhCC--CCCEEEEEecCc
Confidence 47888999999988888888898 8899999999988887777432 1 12222222211 257888888876
Q ss_pred HHHHHHH----HHhccCCceEEEEcc
Q 018022 284 SLVQEAY----ACCRKGWGKTIVLGV 305 (362)
Q Consensus 284 ~~~~~~~----~~l~~~~G~iv~~G~ 305 (362)
..++.++ ..++++ ..++.++.
T Consensus 71 ~~~~~v~~~i~~~l~~g-~ivid~st 95 (299)
T PRK12490 71 EVTESVIKDLYPLLSPG-DIVVDGGN 95 (299)
T ss_pred hHHHHHHHHHhccCCCC-CEEEECCC
Confidence 3344333 334454 45566654
No 449
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.20 E-value=1 Score=41.01 Aligned_cols=93 Identities=24% Similarity=0.284 Sum_probs=61.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhhcCCC
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG 272 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~~~~g 272 (362)
..+.+||-+|+|. |..+..+++. |. +|++++.+++.++.+++ .|.. .++.. +. ..+.....+.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~-~~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AA-QDIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CH-HHHhhhcCCC
Confidence 4567888888865 6677777764 77 99999999998887765 2321 22221 11 1222223347
Q ss_pred ccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEE
Q 018022 273 ADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 273 ~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 303 (362)
||+|+.... . ...+..+.+.|+++ |.++++
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 999986422 2 24578899999998 998765
No 450
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.18 E-value=0.29 Score=43.72 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=48.9
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCEEEEE-cCCchHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHhhcC--CC
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 272 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~-~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~--~g 272 (362)
+.++||+|+ |.+|...+..+...|+ +++++ +++.++.+.+.. .+.. .++..+-.+...+.+.+.+... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999998 9999999888888899 78887 887776544322 2221 2222221012233333333222 26
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 451
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=94.17 E-value=0.31 Score=45.16 Aligned_cols=90 Identities=24% Similarity=0.358 Sum_probs=56.0
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCE-EEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 203 STVVIFGLGSIGLAVAEGARLCGATR-IIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 203 ~~vlI~Gag~~G~~a~~la~~~g~~~-vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
.+|+|.|.|.+|...+..++..|... |+..+++.+..+.+.++|. ++.... .....+ ...|+||-++
T Consensus 4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~------~~~~~~-----~~aD~Vivav 72 (279)
T COG0287 4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVA------GLAEAA-----AEADLVIVAV 72 (279)
T ss_pred cEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccc------hhhhhc-----ccCCEEEEec
Confidence 57888899999999999999999843 5777777777777777775 221110 001111 1478888887
Q ss_pred CCHHHHHHHHH----HhccCCceEEEEcc
Q 018022 281 GLASLVQEAYA----CCRKGWGKTIVLGV 305 (362)
Q Consensus 281 g~~~~~~~~~~----~l~~~~G~iv~~G~ 305 (362)
+... ....++ .++++ ..++.+|.
T Consensus 73 Pi~~-~~~~l~~l~~~l~~g-~iv~Dv~S 99 (279)
T COG0287 73 PIEA-TEEVLKELAPHLKKG-AIVTDVGS 99 (279)
T ss_pred cHHH-HHHHHHHhcccCCCC-CEEEeccc
Confidence 7664 333333 34444 45556654
No 452
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.17 E-value=0.36 Score=40.57 Aligned_cols=85 Identities=14% Similarity=0.041 Sum_probs=54.7
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC------cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV------TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~------~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi 277 (362)
+|.|+|+|..|.+++..+...|. +|....++++..+.+++-+. ...+...-.-..++.+.++ +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 58899999999999999999998 99999999888777765322 0101100000123444442 589999
Q ss_pred EcCCCHHHHHHHHHHhcc
Q 018022 278 ECVGLASLVQEAYACCRK 295 (362)
Q Consensus 278 d~~g~~~~~~~~~~~l~~ 295 (362)
-++.... .+..++.+++
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 9999875 5555555554
No 453
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.16 E-value=0.35 Score=45.84 Aligned_cols=94 Identities=16% Similarity=0.072 Sum_probs=63.4
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEE------EcCCCCCCccHHHHHHhhcCCCccEE
Q 018022 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF------VNSKNCGDKSVSQIIIDMTDGGADYC 276 (362)
Q Consensus 203 ~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~v------v~~~~~~~~~~~~~i~~~~~~g~d~v 276 (362)
-+|.|+|+|.+|.+.+..+...|. .|.+.+++.++.+.+.+.+.... +..+-....+..+.+ +..|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 368999999999999998888898 89999998888777665421100 000000001222222 258999
Q ss_pred EEcCCCHHHHHHHHHHhccCCceEEEEc
Q 018022 277 FECVGLASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 277 id~~g~~~~~~~~~~~l~~~~G~iv~~G 304 (362)
|.++.... +..+++.++++ -.++.+.
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~ 104 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCA 104 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEe
Confidence 99999886 68888888885 5666554
No 454
>PLN02244 tocopherol O-methyltransferase
Probab=94.16 E-value=0.3 Score=46.72 Aligned_cols=95 Identities=21% Similarity=0.255 Sum_probs=63.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHhhcCCC
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG 272 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~~i~~~~~~g 272 (362)
+++++||=+|+|. |..+..+++..|. +|++++.++...+.+++ .+.. .++..+. .++ .+.++.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence 7889999999865 6667777887788 99999999887766554 2331 1222111 110 112337
Q ss_pred ccEEEEcCCC------HHHHHHHHHHhccCCceEEEEcc
Q 018022 273 ADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 273 ~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
||+|+..... ...+.++.+.|+++ |++++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9999864332 24577899999998 99988653
No 455
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.15 E-value=0.47 Score=44.31 Aligned_cols=93 Identities=18% Similarity=0.259 Sum_probs=65.7
Q ss_pred ccccchhhhHHHHHHhcCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHHHhcCCcEEEcCCCCC
Q 018022 181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNCG 257 (362)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~~~~g~~~vv~~~~~~ 257 (362)
.++|+....+. +.+..++ -.|.+|+|+|. +.+|.-.+.++...|+ .|++.. ++.
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 45555443443 4454454 47999999995 9999999999999999 888874 321
Q ss_pred CccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 258 ~~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
++.+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 194 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 --DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred --CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 1222222 3899999999998777655 8887 888899864
No 456
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=94.12 E-value=0.67 Score=40.20 Aligned_cols=92 Identities=26% Similarity=0.441 Sum_probs=54.0
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc--------C-----
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT--------D----- 270 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~--------~----- 270 (362)
+|-|+|.|-+|+-.+..+...|+ +|++++.++++.+.+++ |...+. + +.+.+.+++.. .
T Consensus 2 ~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~-g~~p~~---E---~~l~~ll~~~~~~~~l~~t~~~~~a 73 (185)
T PF03721_consen 2 KIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN-GELPIY---E---PGLDELLKENVSAGRLRATTDIEEA 73 (185)
T ss_dssp EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT-TSSSS----C---TTHHHHHHHHHHTTSEEEESEHHHH
T ss_pred EEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh-cccccc---c---cchhhhhccccccccchhhhhhhhh
Confidence 57899999999999999999999 99999999999988876 221111 1 23333333221 0
Q ss_pred -CCccEEEEcCCCH-------------HHHHHHHHHhccCCceEEEEcc
Q 018022 271 -GGADYCFECVGLA-------------SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 271 -~g~d~vid~~g~~-------------~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
...|++|-|++.+ .+++.+...+++ +.++.+-.
T Consensus 74 i~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~--~~lvV~~S 120 (185)
T PF03721_consen 74 IKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLRP--GDLVVIES 120 (185)
T ss_dssp HHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHCS--CEEEEESS
T ss_pred hhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHhh--cceEEEcc
Confidence 0379999999875 234455555666 46666543
No 457
>PRK10206 putative oxidoreductase; Provisional
Probab=94.10 E-value=0.71 Score=44.16 Aligned_cols=130 Identities=11% Similarity=0.009 Sum_probs=77.8
Q ss_pred EEEEECCChHH-HHHHH-HHHH-cCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 204 TVVIFGLGSIG-LAVAE-GARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 204 ~vlI~Gag~~G-~~a~~-la~~-~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
+|.|+|.|.++ ...+. +... -+++.+.+.++++++.+.+++++...++ .++.+.+. ...+|+|+.++
T Consensus 3 rvgiiG~G~~~~~~h~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~-------~~~~ell~---~~~iD~V~I~t 72 (344)
T PRK10206 3 NCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFT-------SDLDEVLN---DPDVKLVVVCT 72 (344)
T ss_pred EEEEECCCHHHhheehhhHhcCCCCEEEEEEEcCChhHHHHHHhcCCCccc-------CCHHHHhc---CCCCCEEEEeC
Confidence 57899998765 33343 3233 3563444566665555556666532222 22333332 22799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH-------HHhcCcEEEEeeccCCCccccHHHHHHHHHcCCc
Q 018022 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE-------VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKWS 352 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~-------~~~~~~~i~g~~~~~~~~~~~l~~~l~~~~~g~l 352 (362)
......+.+..+++. |+-|++-. ++..+..+ ...+++.+.-.+...+ ...+..+-+++++|+|
T Consensus 73 p~~~H~~~~~~al~a--GkhVl~EK-----Pla~~~~ea~~l~~~a~~~~~~l~v~~~~R~--~p~~~~~k~li~~g~i 142 (344)
T PRK10206 73 HADSHFEYAKRALEA--GKNVLVEK-----PFTPTLAEAKELFALAKSKGLTVTPYQNRRF--DSCFLTAKKAIESGKL 142 (344)
T ss_pred CchHHHHHHHHHHHc--CCcEEEec-----CCcCCHHHHHHHHHHHHHhCCEEEEEEeeeE--CHHHHHHHHHHHcCCC
Confidence 998878999999988 57777743 23333322 2234566554433222 3567888888888876
No 458
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.10 E-value=0.35 Score=49.98 Aligned_cols=96 Identities=9% Similarity=0.077 Sum_probs=67.7
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 281 (362)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++- +. .-.+.+++.--..+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Da----t~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DA----TQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eC----CCHHHHHhcCCccCCEEEEEeC
Confidence 3579999999999999999999999 9999999999999999988754432 21 1123333332227999999999
Q ss_pred CHHHHHHH---HHHhccCCceEEEEc
Q 018022 282 LASLVQEA---YACCRKGWGKTIVLG 304 (362)
Q Consensus 282 ~~~~~~~~---~~~l~~~~G~iv~~G 304 (362)
++..-..+ .+...++ -+++.-.
T Consensus 474 d~~~n~~i~~~~r~~~p~-~~IiaRa 498 (601)
T PRK03659 474 EPEDTMKIVELCQQHFPH-LHILARA 498 (601)
T ss_pred CHHHHHHHHHHHHHHCCC-CeEEEEe
Confidence 87533233 3444454 5665543
No 459
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.07 E-value=0.72 Score=41.99 Aligned_cols=97 Identities=23% Similarity=0.163 Sum_probs=68.1
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhc-C
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-D 270 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~-~ 270 (362)
+.......++++||=+|+|. |..+..+++.. +. +|++++.++.-++.+++.+.+. +.. +.. ++. .
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~-~~~------d~~----~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDA-RTG------DVR----DWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcE-EEc------Chh----hCCCC
Confidence 44556678889999999866 66677777765 45 9999999999888887765442 221 111 111 2
Q ss_pred CCccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEE
Q 018022 271 GGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 271 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 303 (362)
+.||+|+-... . ...+..+.+.|+++ |++++.
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 37999998543 2 34577899999998 998865
No 460
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.04 E-value=0.51 Score=43.95 Aligned_cols=85 Identities=26% Similarity=0.346 Sum_probs=56.5
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh-cCCcE-E--EcCCCCCC---ccHHHHHHhhc
Q 018022 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-F--VNSKNCGD---KSVSQIIIDMT 269 (362)
Q Consensus 198 ~~~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~g~~~-v--v~~~~~~~---~~~~~~i~~~~ 269 (362)
+.++..+++|+|. .++|++.+.-++..|+ .|..+.++.+|+..+++ ++... + |.+...+- +.....+.++.
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~ 107 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR 107 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence 3455578999976 9999999999999999 99999999999887764 44321 1 22222000 11222333332
Q ss_pred --CCCccEEEEcCCCH
Q 018022 270 --DGGADYCFECVGLA 283 (362)
Q Consensus 270 --~~g~d~vid~~g~~ 283 (362)
.+.+|.+|.|.|+.
T Consensus 108 ~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 108 DLEGPIDNLFCCAGVA 123 (331)
T ss_pred hccCCcceEEEecCcc
Confidence 23689999999973
No 461
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.03 E-value=0.79 Score=41.02 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=46.0
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE---EEcCCCCCCccHHHHHHh-----hcCC-Cc
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE---FVNSKNCGDKSVSQIIID-----MTDG-GA 273 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~~i~~-----~~~~-g~ 273 (362)
++||+|+ |.+|...++.+...|+ +|++++++.++. .....+... ..|-.+ .+++.+.+.+ +... ..
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHPS-LAAAAGERLAEVELDLSD--AAAAAAWLAGDLLAAFVDGASR 78 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcchh-hhhccCCeEEEEEeccCC--HHHHHHHHHHHHHHHhccCCCc
Confidence 6899998 9999999999888999 888888776542 223333221 123222 1233332322 1122 67
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 79 ~~~v~~ag~ 87 (243)
T PRK07023 79 VLLINNAGT 87 (243)
T ss_pred eEEEEcCcc
Confidence 889988774
No 462
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.02 E-value=0.31 Score=44.78 Aligned_cols=105 Identities=16% Similarity=0.214 Sum_probs=67.5
Q ss_pred HHHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCC-cEEEcCCCCCCccHHHHHHhhcCC
Q 018022 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG 271 (362)
Q Consensus 193 l~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~~i~~~~~~ 271 (362)
+....+++++.+||=+|+|. |..+..+++..+. +|++++.+++-.+.+++... ...+.... .++.+ ..+.++
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~---~D~~~--~~~~~~ 116 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA---NDILK--KDFPEN 116 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE---CCccc--CCCCCC
Confidence 45667889999999999864 5556667776777 99999999888887776321 11011101 11110 011123
Q ss_pred CccEEEEcC-----C---CHHHHHHHHHHhccCCceEEEEcc
Q 018022 272 GADYCFECV-----G---LASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 272 g~d~vid~~-----g---~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
.||+|+..- + -...++.+.+.|+|+ |++++...
T Consensus 117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 699998621 1 124577889999998 99988754
No 463
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.01 E-value=0.67 Score=44.00 Aligned_cols=105 Identities=17% Similarity=0.117 Sum_probs=67.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHH-Hhc----CCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRF----GVTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~-~~~----g~~~vv~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
+...+++|+|+|..+.+.+..+. ..++++|.+.+++.+|.+.+ +++ |.. +...+ ++.+.+. ..
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~-----~~~~av~-----~a 195 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT-----DPRAAMS-----GA 195 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC-----CHHHHhc-----cC
Confidence 45678999999999988887776 57888999999999887654 333 432 22222 2333332 59
Q ss_pred cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHHH
Q 018022 274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE 318 (362)
Q Consensus 274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~ 318 (362)
|+|+.|++....+- -...++++ -.+..+|.+.+ ..-+++..-
T Consensus 196 DiVvtaT~s~~p~i-~~~~l~~g-~~i~~vg~~~p-~~rEld~~~ 237 (326)
T TIGR02992 196 DIIVTTTPSETPIL-HAEWLEPG-QHVTAMGSDAE-HKNEIDPAV 237 (326)
T ss_pred CEEEEecCCCCcEe-cHHHcCCC-cEEEeeCCCCC-CceecCHHH
Confidence 99999998754211 12357885 67777886532 233555443
No 464
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.99 E-value=0.61 Score=46.02 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=65.2
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----hcCCc-EE--EcCCCCCCccHHHHHH
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIII 266 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~g~~-~v--v~~~~~~~~~~~~~i~ 266 (362)
....++++|++||=.|+|+ |..+..+++.++..+|++++.++++++.++ ++|.. .+ ++.+. ..... .
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~~~-~- 304 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGPSQ-W- 304 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccccc-c-
Confidence 3556788999999988755 444555556555339999999999987764 35654 22 22211 11100 0
Q ss_pred hhcCCCccEEEE---cCCC-------------------------HHHHHHHHHHhccCCceEEEEcc
Q 018022 267 DMTDGGADYCFE---CVGL-------------------------ASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 267 ~~~~~g~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
...+.||.||- |+|. ...+..+++.++++ |+++..-.
T Consensus 305 -~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 305 -AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred -ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 01226999885 4442 13567788999998 99986644
No 465
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.97 E-value=0.31 Score=44.41 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=48.6
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCEEEEEcCC---chHHHHH-HhcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 018022 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 201 ~g~~vlI~Ga---g~~G~~a~~la~~~g~~~vi~~~~~---~~~~~~~-~~~g~~~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
.+.++||+|+ +++|++.++.+...|+ +|+.+.+. .++++.+ ++++....+ |-.+ ++++.+.+.+...
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence 4678999984 5899999988888999 88777543 3333333 334432222 2222 2334444444322
Q ss_pred -CCccEEEEcCCC
Q 018022 271 -GGADYCFECVGL 282 (362)
Q Consensus 271 -~g~d~vid~~g~ 282 (362)
+.+|++|.+.|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 379999998874
No 466
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.97 E-value=0.42 Score=42.59 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=47.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-HHH----HHhcCCc-EEE--cCCCCCCccHHHHHHhhcC-
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-~~~----~~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~- 270 (362)
.+.++||+|+ |.+|...+..+...|+ +|+++.++..+ .+. ++..+.. .++ |-.+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3568999998 9999999999999999 77666655442 221 2222322 222 2222 2333333333322
Q ss_pred -CCccEEEEcCCC
Q 018022 271 -GGADYCFECVGL 282 (362)
Q Consensus 271 -~g~d~vid~~g~ 282 (362)
+++|.+|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 268999999874
No 467
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.97 E-value=0.53 Score=41.93 Aligned_cols=46 Identities=26% Similarity=0.330 Sum_probs=37.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCc----------hHHHHHHhcC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS----------EKFEIGKRFG 246 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~----------~~~~~~~~~g 246 (362)
.|.+|+|.|-|.+|+.+++++...|.+.|.++|.+. +.++..++.+
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 578999999999999999999999986677777776 6666665544
No 468
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=93.95 E-value=0.54 Score=43.68 Aligned_cols=88 Identities=19% Similarity=0.265 Sum_probs=57.4
Q ss_pred EEEEECCChHHHHH-HHHHHHcCCCEEEEEcCCchH--HHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcC
Q 018022 204 TVVIFGLGSIGLAV-AEGARLCGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (362)
Q Consensus 204 ~vlI~Gag~~G~~a-~~la~~~g~~~vi~~~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~ 280 (362)
+|.|+|+|.+|... ..+.+..+.+-+-+++.+.++ ++.++++|...... ++...+. ...+|+|++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEECC
Confidence 58899999999865 555555567334445555543 56677888764432 2222222 12699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEE
Q 018022 281 GLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
+.....+.+..++.. |+.++.
T Consensus 73 p~~~H~e~a~~al~a--Gk~VId 93 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVID 93 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEE
Confidence 998777777777777 455544
No 469
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=93.94 E-value=0.27 Score=46.96 Aligned_cols=77 Identities=13% Similarity=0.043 Sum_probs=48.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHhcC--C-cEEEcCCCCCCccHHHHHHhhcCC-Ccc
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFG--V-TEFVNSKNCGDKSVSQIIIDMTDG-GAD 274 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~g--~-~~vv~~~~~~~~~~~~~i~~~~~~-g~d 274 (362)
.+.+|||+|+ |.+|...++.+...|. +|++++++...... .+.++ . ...+..+- .+ .+.+.++..+ ++|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDI---RD-AAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccC---CC-HHHHHHHHhhcCCC
Confidence 3678999998 9999999999999998 89998877654322 12222 1 11121111 11 2233444334 689
Q ss_pred EEEEcCCC
Q 018022 275 YCFECVGL 282 (362)
Q Consensus 275 ~vid~~g~ 282 (362)
+||.+.+.
T Consensus 78 ~vih~A~~ 85 (349)
T TIGR02622 78 IVFHLAAQ 85 (349)
T ss_pred EEEECCcc
Confidence 99999873
No 470
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.93 E-value=0.84 Score=43.27 Aligned_cols=36 Identities=36% Similarity=0.484 Sum_probs=33.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCch
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 237 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~ 237 (362)
.|.++.|+|.|.||.+.++.++..|. +|+..+++..
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~ 180 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN 180 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC
Confidence 48899999999999999999999999 9999998764
No 471
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.93 E-value=0.4 Score=46.24 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=63.9
Q ss_pred CEEEEECC-ChHHHHHHHHHHHc--CCCEEEEEc--CCchHH-HHHHhcCCcEEEcCCCCCCccHH--------------
Q 018022 203 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVD--VISEKF-EIGKRFGVTEFVNSKNCGDKSVS-------------- 262 (362)
Q Consensus 203 ~~vlI~Ga-g~~G~~a~~la~~~--g~~~vi~~~--~~~~~~-~~~~~~g~~~vv~~~~~~~~~~~-------------- 262 (362)
.+|.|+|+ |.+|..++.+.+.. .+ +|+++. ++.+++ +.+++++...++-.++.....+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 47899997 99999999988765 56 666664 444454 44667888776654430001111
Q ss_pred HHHHhhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 018022 263 QIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 263 ~~i~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 303 (362)
+.+.++..- .+|+|+.++++...+...+.+++.+ +-+.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG--K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG--KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC--CcEEE
Confidence 122223222 5899999999886688899999884 44444
No 472
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.93 E-value=0.34 Score=45.59 Aligned_cols=78 Identities=22% Similarity=0.189 Sum_probs=50.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHH-HhcCC--c--EEE--cCCCCCCccHHHHHHhhc--C
Q 018022 202 GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIG-KRFGV--T--EFV--NSKNCGDKSVSQIIIDMT--D 270 (362)
Q Consensus 202 g~~vlI~Ga-g~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~-~~~g~--~--~vv--~~~~~~~~~~~~~i~~~~--~ 270 (362)
+.+++|+|+ +++|.+.++.+...| + +|+.++++.++.+.+ ++++. . +++ |-.+ ..++.+.+.++. .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 568999998 999999988888889 7 999999888776544 33321 1 122 3222 123333333332 2
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 473
>PRK00536 speE spermidine synthase; Provisional
Probab=93.90 E-value=0.31 Score=44.64 Aligned_cols=100 Identities=13% Similarity=-0.035 Sum_probs=66.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC-cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~-~~vv~~~~~~~~~~~~~i~~~~~~g~d~vi 277 (362)
+..++|||+|+|- |.++-+++|.. ++|..++.+++-.+.++++ .. ...++.-. -.+...+.+...+.||+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence 5668999998755 55666777775 3999999999999988883 21 11111111 1222233333334799877
Q ss_pred Ec-CCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 278 EC-VGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 278 d~-~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
-- +-.+...+.+.+.|+++ |.++.-+.+
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~s 173 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVAKH 173 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECCCC
Confidence 54 66777788999999998 999887653
No 474
>PRK06849 hypothetical protein; Provisional
Probab=93.90 E-value=0.49 Score=46.01 Aligned_cols=95 Identities=15% Similarity=0.042 Sum_probs=62.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-CcEEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~~i~~~~~~-g~d~vi 277 (362)
...+|||+|+ .+.|+..++.++..|+ +|++++.++.......+.- ....+.....+++.+.+.+.++... ++|++|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 4578999998 6689999999999999 9999998865544332211 1122321111235577888887766 899999
Q ss_pred EcCCCHHHHHHHHHHhccC
Q 018022 278 ECVGLASLVQEAYACCRKG 296 (362)
Q Consensus 278 d~~g~~~~~~~~~~~l~~~ 296 (362)
-+......+......+.+.
T Consensus 82 P~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 82 PTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred ECChHHHhHHhhhhhhcCC
Confidence 8876433333444556654
No 475
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.90 E-value=0.24 Score=40.17 Aligned_cols=88 Identities=20% Similarity=0.261 Sum_probs=52.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEc-CCchHHHHHHh-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~-~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid 278 (362)
+.-+|-|+|+|.+|......++..|+ .|..+. ++.+..+.+.. ++...+.+..+ ... .+|++|-
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~~-~aDlv~i 74 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------ILR-DADLVFI 74 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GGC-C-SEEEE
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------ccc-cCCEEEE
Confidence 34578999999999999999999999 777774 44555555554 44333333221 111 5899999
Q ss_pred cCCCHHHHHHHHHHhccC----CceEEEE
Q 018022 279 CVGLASLVQEAYACCRKG----WGKTIVL 303 (362)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~----~G~iv~~ 303 (362)
++.... +..+...|... .|++++-
T Consensus 75 avpDda-I~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 75 AVPDDA-IAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp -S-CCH-HHHHHHHHHCC--S-TT-EEEE
T ss_pred EechHH-HHHHHHHHHHhccCCCCcEEEE
Confidence 999886 77777766642 1565544
No 476
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.88 E-value=0.61 Score=41.61 Aligned_cols=85 Identities=11% Similarity=0.167 Sum_probs=56.7
Q ss_pred EEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCC
Q 018022 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (362)
Q Consensus 205 vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g 281 (362)
|+|+|+ |.+|...++.+...++ +|.++.|+.. +.+.++..|+..+ ..+- +-.+.+.+... |+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999999888 8888888764 3566777888543 3222 11334444333 6999999999
Q ss_pred C---HH--HHHHHHHHhccC
Q 018022 282 L---AS--LVQEAYACCRKG 296 (362)
Q Consensus 282 ~---~~--~~~~~~~~l~~~ 296 (362)
. .. ....++++.+.-
T Consensus 74 ~~~~~~~~~~~~li~Aa~~a 93 (233)
T PF05368_consen 74 PSHPSELEQQKNLIDAAKAA 93 (233)
T ss_dssp CSCCCHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhhHHHhhhcc
Confidence 3 21 123455555553
No 477
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.86 E-value=0.37 Score=44.26 Aligned_cols=79 Identities=25% Similarity=0.331 Sum_probs=49.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchH-------HH----HHHhcCCcE-E--EcCCCCCCccHHHHH
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------FE----IGKRFGVTE-F--VNSKNCGDKSVSQII 265 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~-------~~----~~~~~g~~~-v--v~~~~~~~~~~~~~i 265 (362)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++ ++ .++..+... + .|-.+ .+.+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 4578999998 9999999999888999 89988876542 11 122233322 2 23222 23333333
Q ss_pred HhhcC--CCccEEEEcCCC
Q 018022 266 IDMTD--GGADYCFECVGL 282 (362)
Q Consensus 266 ~~~~~--~g~d~vid~~g~ 282 (362)
.+... +.+|++|.+.|.
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 33221 269999999885
No 478
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.86 E-value=0.52 Score=43.78 Aligned_cols=82 Identities=17% Similarity=0.271 Sum_probs=58.2
Q ss_pred HHhcCC-CCCCEEEEECCCh-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCC
Q 018022 194 WRTANV-EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 271 (362)
Q Consensus 194 ~~~~~~-~~g~~vlI~Gag~-~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~ 271 (362)
.+..++ -.|.+|+|+|+|. +|...+.++...|+ +|+++.+.. .++.+.+ .
T Consensus 150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~ 201 (283)
T PRK14192 150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----K 201 (283)
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----c
Confidence 333443 4788999999976 99999999999999 888876421 1222222 1
Q ss_pred CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 272 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 272 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
.+|++|.++|.+..+. .+.++++ ..++.+|..
T Consensus 202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 5899999999776443 2558886 788888864
No 479
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.82 E-value=0.89 Score=39.92 Aligned_cols=96 Identities=18% Similarity=0.238 Sum_probs=64.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCc--EEEcCCCCCCccHHHHHHhhc-CCCc
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIIIDMT-DGGA 273 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~~i~~~~-~~g~ 273 (362)
++.+||-+|+|. |..+..+++.....++++++.+++..+.+++ .+.. .++. .+..+.+.... .+.+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~ 112 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL 112 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence 677888889876 7777777776644489999999998887764 2332 2222 22323333323 3378
Q ss_pred cEEEEcCC--------------CHHHHHHHHHHhccCCceEEEEc
Q 018022 274 DYCFECVG--------------LASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 274 d~vid~~g--------------~~~~~~~~~~~l~~~~G~iv~~G 304 (362)
|.|+-... ....++.+.+.|+++ |.+++.-
T Consensus 113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 98886433 234588999999998 9998764
No 480
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=93.82 E-value=0.67 Score=40.66 Aligned_cols=34 Identities=32% Similarity=0.488 Sum_probs=30.3
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 202 g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
..+|+|+|+|++|...+..+.+.|+.+++.+|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3789999999999999999999999889888754
No 481
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.81 E-value=0.2 Score=45.60 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=48.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~~i~~~~~--~g~d~v 276 (362)
.+.++||+|+ |.+|.+.++.+...|+ +|+.++++.++.+. ..... ..|-.+ ..++.+.+.+... +.+|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 9999999999999999 88888877655421 11111 123222 2333333333321 368999
Q ss_pred EEcCCC
Q 018022 277 FECVGL 282 (362)
Q Consensus 277 id~~g~ 282 (362)
|.+.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 998873
No 482
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.79 E-value=0.29 Score=51.28 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-h----cCCc--EEEcCCCCCCccHHHHHHhhc--C
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGVT--EFVNSKNCGDKSVSQIIIDMT--D 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~----~g~~--~vv~~~~~~~~~~~~~i~~~~--~ 270 (362)
.+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. + .+.. ..+..+-.+..++.+.+.+.. -
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3688999998 9999999999988999 9999999887765442 2 2321 122111101233333343332 1
Q ss_pred CCccEEEEcCCC
Q 018022 271 GGADYCFECVGL 282 (362)
Q Consensus 271 ~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 492 g~iDilV~nAG~ 503 (676)
T TIGR02632 492 GGVDIVVNNAGI 503 (676)
T ss_pred CCCcEEEECCCC
Confidence 379999999984
No 483
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=93.78 E-value=1 Score=42.76 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=67.6
Q ss_pred CCCCCEEEEECCChHHHHHHHHHH-HcCCCEEEEEcCCchHHHHHH----hcCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 018022 199 VEVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (362)
Q Consensus 199 ~~~g~~vlI~Gag~~G~~a~~la~-~~g~~~vi~~~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~ 273 (362)
.+...++.|+|+|..|.+.++... ....++|.+.+++.++.+.+. ++|.. +... .+..+.++ +.
T Consensus 125 ~~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~-v~~~-----~~~~eav~-----~a 193 (325)
T TIGR02371 125 RKDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVP-VRAA-----TDPREAVE-----GC 193 (325)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCc-EEEe-----CCHHHHhc-----cC
Confidence 355678999999999998766554 456779999999999876543 33432 1111 22333332 58
Q ss_pred cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCCccccCHH
Q 018022 274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317 (362)
Q Consensus 274 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~ 317 (362)
|+|+-|+++...+ -....++++ -.++.+|.+.++. -+++..
T Consensus 194 DiVitaT~s~~P~-~~~~~l~~g-~~v~~vGs~~p~~-~Eld~~ 234 (325)
T TIGR02371 194 DILVTTTPSRKPV-VKADWVSEG-THINAIGADAPGK-QELDPE 234 (325)
T ss_pred CEEEEecCCCCcE-ecHHHcCCC-CEEEecCCCCccc-ccCCHH
Confidence 9999998765311 123567896 7888999764432 355543
No 484
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=93.78 E-value=1 Score=41.47 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=62.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-C-------c--EEEcCCCCCCccHHHHHHhhc
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V-------T--EFVNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~-------~--~vv~~~~~~~~~~~~~i~~~~ 269 (362)
+.+.+||++|+|. |..+..+++.....++++++.+++-.+.+++.- . . .++. .+..+.+++.
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~------~D~~~~l~~~- 142 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI------DDGFKFLADT- 142 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE------CchHHHHHhC-
Confidence 4456999998865 445556666655669999999888777776631 0 0 1111 2333334332
Q ss_pred CCCccEEEEcCC----------CHHHHHHHHHHhccCCceEEEEcc
Q 018022 270 DGGADYCFECVG----------LASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 270 ~~g~d~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
.+.+|+||-... ....++.+.+.|+++ |.+++...
T Consensus 143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~~ 187 (270)
T TIGR00417 143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQSE 187 (270)
T ss_pred CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcCC
Confidence 347999986433 224467888999998 99988744
No 485
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.74 E-value=1.9 Score=38.96 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=27.1
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHcCCCEEEEEc
Q 018022 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVD 233 (362)
Q Consensus 201 ~g~~vlI~Gag---~~G~~a~~la~~~g~~~vi~~~ 233 (362)
++.++||+|++ ++|.+.+..+...|+ +|++++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEe
Confidence 57899999983 799999999999999 777764
No 486
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.73 E-value=1.4 Score=43.51 Aligned_cols=102 Identities=20% Similarity=0.272 Sum_probs=65.6
Q ss_pred HhcCCCCCCEEEEECCChHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHH----hcCCcE--EEcCCCCCCccHHHHHHh
Q 018022 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g-~~~vi~~~~~~~~~~~~~----~~g~~~--vv~~~~~~~~~~~~~i~~ 267 (362)
...++++|++||=.|+|+ |.-+..++..++ ...|+++|.++++++.++ ++|.+. ++..+. .++ .+
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~ 302 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TE 302 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hh
Confidence 456788999988888765 555556666652 239999999999988875 356653 222221 111 11
Q ss_pred hcCCCccEEEE---cCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 018022 268 MTDGGADYCFE---CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 268 ~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
...+.||.|+- |+|.. ..+..+++.++++ |+++..-.
T Consensus 303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC 367 (431)
T PRK14903 303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC 367 (431)
T ss_pred hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence 22336999985 44331 2256788999998 99876654
No 487
>PRK04266 fibrillarin; Provisional
Probab=93.70 E-value=1.6 Score=39.13 Aligned_cols=102 Identities=13% Similarity=0.156 Sum_probs=62.2
Q ss_pred HhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc----CCcEEEcCCCCCCccHHHHHHhhcC
Q 018022 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 195 ~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~~i~~~~~ 270 (362)
+...+++|++||=.|+|. |..+..+++..+..+|++++.+++.++.+.+. .--..+..+. .+. .....+.
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l~- 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHVV- 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhcc-
Confidence 457889999999998754 44555666665433899999999877644322 1112222222 110 0001111
Q ss_pred CCccEEEEcCCCH----HHHHHHHHHhccCCceEEEE
Q 018022 271 GGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 271 ~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~ 303 (362)
+.+|+++-....+ ..++.+.+.|+++ |++++.
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2599999654433 2367888899998 999884
No 488
>PRK09135 pteridine reductase; Provisional
Probab=93.66 E-value=0.49 Score=42.25 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=48.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHH----hcCC--cEEE--cCCCCCCccHHHHHHhhcC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGK----RFGV--TEFV--NSKNCGDKSVSQIIIDMTD 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~~~----~~g~--~~vv--~~~~~~~~~~~~~i~~~~~ 270 (362)
.+.++||+|+ |.+|...++.+...|+ +|++++++. ++.+.+. +... .+++ |-.+ .+.+.+.+.+...
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 81 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD--PDALPELVAACVA 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4578999998 9999999988888999 888888753 3333322 2111 1122 2222 1233333333211
Q ss_pred --CCccEEEEcCCC
Q 018022 271 --GGADYCFECVGL 282 (362)
Q Consensus 271 --~g~d~vid~~g~ 282 (362)
+++|++|.+.|.
T Consensus 82 ~~~~~d~vi~~ag~ 95 (249)
T PRK09135 82 AFGRLDALVNNASS 95 (249)
T ss_pred HcCCCCEEEECCCC
Confidence 268999999983
No 489
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=93.63 E-value=0.72 Score=42.99 Aligned_cols=108 Identities=15% Similarity=0.095 Sum_probs=71.5
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcC-C----cEEEcCCCCCCcc---HHHHHHhhcC
Q 018022 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V----TEFVNSKNCGDKS---VSQIIIDMTD 270 (362)
Q Consensus 200 ~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g-~----~~vv~~~~~~~~~---~~~~i~~~~~ 270 (362)
-.+..|+|+|+ +++|...+.-+...|+ +|++..-.++..+.++.-- - +-.+|-.+ ++. ..+.+++..+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~--~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK--PESVKEAAQWVKKHLG 103 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC--HHHHHHHHHHHHHhcc
Confidence 44566999998 9999999999999999 9998888777766665321 1 11233222 122 3344555555
Q ss_pred C-CccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccCCCCC
Q 018022 271 G-GADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVDQPGS 310 (362)
Q Consensus 271 ~-g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~~~~ 310 (362)
. +.-.++++.|.. ......+..+++-.||++.++...+..
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~ 170 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV 170 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc
Confidence 5 788889988832 223445566666569999998755443
No 490
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.61 E-value=0.93 Score=39.12 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=64.1
Q ss_pred HHhcCCCCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcE--EEcCCCCCCccHHHHHHh
Q 018022 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 267 (362)
Q Consensus 194 ~~~~~~~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~~i~~ 267 (362)
.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++..+ ...
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d------~~~---- 92 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE------API---- 92 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC------chh----
Confidence 3556778889999888855 6666666666543399999999987777653 34322 22211 111
Q ss_pred hcCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEc
Q 018022 268 MTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG 304 (362)
Q Consensus 268 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G 304 (362)
...+.+|+|+..... ...+..+.+.|+++ |++++..
T Consensus 93 ~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 93 ELPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred hcCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 112369999864321 23467889999997 9987753
No 491
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.59 E-value=0.56 Score=43.92 Aligned_cols=81 Identities=21% Similarity=0.271 Sum_probs=47.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCc-hHHHH----HHhcCCcEEEcCCCCC-CccHHHHHHhhc-CCC
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEI----GKRFGVTEFVNSKNCG-DKSVSQIIIDMT-DGG 272 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~-~~~~~----~~~~g~~~vv~~~~~~-~~~~~~~i~~~~-~~g 272 (362)
.+.++||+|+ +++|.+.++.+...|+ +|+++++.. ++.+. ++..|....+..-+.. .+.+.+.+.+.. -+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888999 888887643 23322 2233432222111111 122222222211 247
Q ss_pred ccEEEEcCCC
Q 018022 273 ADYCFECVGL 282 (362)
Q Consensus 273 ~d~vid~~g~ 282 (362)
+|++|.+.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 492
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.54 E-value=0.41 Score=44.96 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=31.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
.|.+|.|+|.|.+|...+++++..|. +|++.+++
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~ 154 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRS 154 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 57899999999999999999999999 99999875
No 493
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.49 E-value=0.48 Score=43.00 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=48.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcC-CchHHHHH-Hh----cCCc-EEEcCCCCCCccHHHHHHhhcC--
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KR----FGVT-EFVNSKNCGDKSVSQIIIDMTD-- 270 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~----~g~~-~vv~~~~~~~~~~~~~i~~~~~-- 270 (362)
++.++||+|+ +++|.+.+..+...|+ +|+.+.+ +.++.+.+ ++ .+.. ..+..+-.+.+++.+.+.++..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4689999998 9999999999999999 7777654 44444322 21 2322 2222211112333333433322
Q ss_pred CCccEEEEcCC
Q 018022 271 GGADYCFECVG 281 (362)
Q Consensus 271 ~g~d~vid~~g 281 (362)
+.+|++|.+.|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 36899999885
No 494
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=93.49 E-value=0.76 Score=42.98 Aligned_cols=72 Identities=22% Similarity=0.296 Sum_probs=51.6
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcCCCH
Q 018022 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (362)
Q Consensus 204 ~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~vid~~g~~ 283 (362)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|+...
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~~~~--------~s~~~~~~-----~aDvVi~~vp~~ 68 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGATPA--------ASPAQAAA-----GAEFVITMLPNG 68 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 68899999999988888888898 99999999999888877664311 12222221 367888888776
Q ss_pred HHHHHH
Q 018022 284 SLVQEA 289 (362)
Q Consensus 284 ~~~~~~ 289 (362)
..++..
T Consensus 69 ~~~~~v 74 (296)
T PRK15461 69 DLVRSV 74 (296)
T ss_pred HHHHHH
Confidence 534433
No 495
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=93.43 E-value=0.67 Score=41.59 Aligned_cols=93 Identities=22% Similarity=0.276 Sum_probs=61.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHh----cCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~~i~~~~~~g~d~ 275 (362)
-+|.+||=+|+|+ |+++.-+| .+|+ .|+++|-+++-++.++. -|.. +++.. ..++.+.+.. +.||+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~----~~~edl~~~~-~~FDv 127 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVN--IDYRQ----ATVEDLASAG-GQFDV 127 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhcccc--ccchh----hhHHHHHhcC-CCccE
Confidence 4788999999854 55554544 4567 99999999998888874 2322 44543 2334443321 48999
Q ss_pred EEE-----cCCCH-HHHHHHHHHhccCCceEEEE
Q 018022 276 CFE-----CVGLA-SLVQEAYACCRKGWGKTIVL 303 (362)
Q Consensus 276 vid-----~~g~~-~~~~~~~~~l~~~~G~iv~~ 303 (362)
|++ -+..+ ..+..+.+.++|+ |.+.+-
T Consensus 128 V~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 128 VTCMEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred EEEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 987 44444 3467889999997 776654
No 496
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.40 E-value=0.56 Score=44.08 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=31.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHH
Q 018022 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF 239 (362)
Q Consensus 201 ~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~ 239 (362)
.|.+|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4679999998 9999999998888999 888877766543
No 497
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.39 E-value=0.77 Score=42.90 Aligned_cols=94 Identities=19% Similarity=0.249 Sum_probs=67.2
Q ss_pred ccccchhhhHHHHHHhcCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhcCCcEEEcCCCCCC
Q 018022 181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (362)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~-~~g~~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~ 258 (362)
.+||+....+. +.+..++ -.|.+|.|+|. +.+|.-.+.++...|+ +|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 45555443333 4455555 36899999998 5899999999999999 8888854321
Q ss_pred ccHHHHHHhhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 018022 259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (362)
Q Consensus 259 ~~~~~~i~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 306 (362)
++.+.++ ..|+||-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 -DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 2233332 3899999999998777665 8887 888899854
No 498
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.38 E-value=0.52 Score=42.40 Aligned_cols=76 Identities=20% Similarity=0.211 Sum_probs=48.9
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHhhcC--CCc
Q 018022 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 273 (362)
Q Consensus 204 ~vlI~Ga-g~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~g~~-~vv--~~~~~~~~~~~~~i~~~~~--~g~ 273 (362)
+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.. ..+ |-.+ ++.+.+.+.+... +.+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899998 9999999999889999 899998887655433 223322 122 2222 1333333333321 268
Q ss_pred cEEEEcCCC
Q 018022 274 DYCFECVGL 282 (362)
Q Consensus 274 d~vid~~g~ 282 (362)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999999875
No 499
>PRK06932 glycerate dehydrogenase; Provisional
Probab=93.36 E-value=0.47 Score=44.81 Aligned_cols=34 Identities=29% Similarity=0.467 Sum_probs=31.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCC
Q 018022 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (362)
Q Consensus 201 ~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~ 235 (362)
.|.+|.|+|.|.+|...+++++..|. +|++.++.
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~ 179 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHK 179 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCC
Confidence 47899999999999999999999999 89998764
No 500
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=93.34 E-value=0.46 Score=43.20 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=64.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHhc-CC---------cEEEcCCCCCCccHHHHHHhhc
Q 018022 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV---------TEFVNSKNCGDKSVSQIIIDMT 269 (362)
Q Consensus 200 ~~g~~vlI~Gag~~G~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-g~---------~~vv~~~~~~~~~~~~~i~~~~ 269 (362)
+...+|||+|.|. |..+-.+++....++|.+++.+++-.+.++++ +. -+++. .|-...+++..
T Consensus 75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~ 147 (246)
T PF01564_consen 75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQ 147 (246)
T ss_dssp SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSS
T ss_pred CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhcc
Confidence 4689999998655 55566777777677999999999988888773 21 12333 23455555543
Q ss_pred CCCccEEEE-cCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 018022 270 DGGADYCFE-CVG---------LASLVQEAYACCRKGWGKTIVLGV 305 (362)
Q Consensus 270 ~~g~d~vid-~~g---------~~~~~~~~~~~l~~~~G~iv~~G~ 305 (362)
...+|+||- ... +...++.+.+.|+++ |.++.-..
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~~ 192 (246)
T PF01564_consen 148 EEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQAG 192 (246)
T ss_dssp ST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEcc
Confidence 327999984 333 236688899999998 99887653
Done!