Query 018025
Match_columns 362
No_of_seqs 226 out of 1240
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:42:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1.4E-71 4.8E-76 539.4 29.5 279 58-344 45-343 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 8E-72 2.7E-76 532.5 26.2 279 56-346 3-309 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 1.4E-71 4.7E-76 531.7 17.2 272 58-344 2-291 (319)
4 1odm_A Isopenicillin N synthas 100.0 1.7E-68 5.8E-73 513.4 27.4 279 54-346 3-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 3.9E-67 1.3E-71 499.6 21.9 268 58-344 3-303 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 9.2E-66 3.1E-70 483.2 24.1 259 58-346 2-277 (280)
7 2hbt_A EGL nine homolog 1; pro 96.1 0.066 2.3E-06 48.3 12.5 182 84-315 16-212 (247)
8 3dkq_A PKHD-type hydroxylase S 95.4 0.044 1.5E-06 49.4 8.1 78 220-315 100-194 (243)
9 2rg4_A Uncharacterized protein 92.6 0.8 2.7E-05 40.2 10.2 80 221-318 105-209 (216)
10 3itq_A Prolyl 4-hydroxylase, a 91.4 0.53 1.8E-05 41.4 7.6 85 220-315 112-211 (216)
11 2jig_A Prolyl-4 hydroxylase; h 91.0 0.54 1.9E-05 41.3 7.3 88 220-317 99-218 (224)
12 3s57_A Alpha-ketoglutarate-dep 78.1 13 0.00045 31.9 9.6 79 221-313 102-200 (204)
13 2iuw_A Alkylated repair protei 75.7 22 0.00076 31.3 10.6 84 220-315 127-229 (238)
14 3i3q_A Alpha-ketoglutarate-dep 74.7 15 0.00052 31.8 9.0 79 220-314 106-201 (211)
15 3tht_A Alkylated DNA repair pr 71.6 6 0.00021 37.2 6.1 92 220-318 199-315 (345)
16 2dbn_A Hypothetical protein YB 45.2 6.8 0.00023 38.1 1.3 57 54-121 95-151 (461)
17 3o2g_A Gamma-butyrobetaine dio 43.6 14 0.00047 35.1 3.2 51 59-121 122-172 (388)
18 3kt7_A PKHD-type hydroxylase T 38.9 71 0.0024 32.3 7.5 100 194-315 105-227 (633)
19 2opi_A L-fuculose-1-phosphate 37.2 16 0.00055 31.4 2.3 36 59-104 125-160 (212)
20 1e4c_P L-fuculose 1-phosphate 31.5 22 0.00076 30.6 2.3 36 59-104 122-157 (215)
21 1otf_A 4-oxalocrotonate tautom 31.0 35 0.0012 22.4 2.8 18 76-93 12-29 (62)
22 1zav_A 50S ribosomal protein L 30.3 1.2E+02 0.0041 25.2 6.7 42 77-118 5-47 (180)
23 3jsy_A Acidic ribosomal protei 30.2 69 0.0023 27.6 5.2 40 78-117 3-43 (213)
24 2opa_A Probable tautomerase YW 29.9 38 0.0013 22.2 2.8 18 76-93 12-29 (61)
25 1otj_A Alpha-ketoglutarate-dep 29.1 33 0.0011 30.6 3.1 44 58-111 16-59 (283)
26 1pvt_A Sugar-phosphate aldolas 28.0 31 0.0011 30.1 2.7 37 58-104 160-196 (238)
27 2j01_J 50S ribosomal protein L 27.8 1.2E+02 0.0041 25.0 6.2 40 78-117 4-45 (173)
28 2ww6_A Fibritin, T4 fibritin; 27.5 51 0.0017 18.5 2.4 14 257-270 11-24 (27)
29 2fk5_A Fuculose-1-phosphate al 26.7 27 0.00093 29.8 1.9 36 59-104 117-153 (200)
30 3ocr_A Class II aldolase/adduc 26.5 34 0.0012 30.7 2.7 38 58-104 155-192 (273)
31 3m20_A 4-oxalocrotonate tautom 25.9 62 0.0021 21.5 3.4 18 76-93 11-28 (62)
32 3nrl_A Uncharacterized protein 25.4 27 0.00093 25.2 1.4 13 258-270 37-49 (81)
33 2x4k_A 4-oxalocrotonate tautom 24.0 56 0.0019 21.2 2.8 30 60-93 3-32 (63)
34 3ry0_A Putative tautomerase; o 23.4 57 0.002 21.8 2.8 18 76-93 12-29 (65)
35 1oih_A Putative alkylsulfatase 22.6 49 0.0017 29.7 3.0 49 58-119 26-75 (301)
36 2v9l_A Rhamnulose-1-phosphate 22.1 33 0.0011 30.8 1.6 36 59-104 179-214 (274)
37 1m5a_B Insulin B chain; alpha 21.6 88 0.003 18.2 2.8 18 81-98 9-26 (30)
38 3m21_A Probable tautomerase HP 21.4 74 0.0025 21.4 3.1 17 76-92 15-31 (67)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.4e-71 Score=539.41 Aligned_cols=279 Identities=30% Similarity=0.474 Sum_probs=248.9
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhCCChhhhcccccccCCC
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFP 137 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~lP~e~K~~~~~~~~~~ 137 (362)
.+||||||+.+.++ ++++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++. ...
T Consensus 45 ~~iPvIDls~l~~~----~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~---~~~ 117 (356)
T 1gp6_A 45 PQVPTIDLKNIESD----DEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYA---NDQ 117 (356)
T ss_dssp CCCCEEECTTTTCS----CHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGB---CBG
T ss_pred CCCCEEEchhccCC----ChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhc---ccc
Confidence 47999999999765 57789999999999999999999999999999999999999999999999999872 221
Q ss_pred --CCCccCCCCCcc-cCcCCCccccccCCCC------CccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCch
Q 018025 138 --AGSYRWGTPTAT-CLNQLSWSEAFHIPMA------DISASAAAFTTLSSTLEQFATTVAGLARKLTAILAEKLGREST 208 (362)
Q Consensus 138 --~~~~~~g~~~~~-~~~~~d~~E~f~i~~~------~~~~~~~~~~~fr~~~e~y~~~~~~la~~Ll~~la~~Lgl~~~ 208 (362)
.+..||+..... ..+..||+|.|.++.. ...||.. +++||+++++|+++|.+|+.+|+++||++||++++
T Consensus 118 ~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 196 (356)
T 1gp6_A 118 ATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT-PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPD 196 (356)
T ss_dssp GGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS-STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 234456544322 2356899999988642 2346554 78999999999999999999999999999999999
Q ss_pred hhhhccC---CCcceeEeeccCCCCCCCCCCcccCcccCCcEEEEeeCCCCceEEEeCCeEEEecCCCCcEEEeccchhh
Q 018025 209 FFQENCL---PSTCYLRMNRYPPCPVPSAIHGLMPHTDSDFLTILHQDEVGGLQLVKDGKWIAVKPNPEALIVNIGDLFQ 285 (362)
Q Consensus 209 ~f~~~~~---~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~~~g~W~~V~p~pg~lvVnvGd~l~ 285 (362)
+|.+.+. ...+.||++|||||+.++...|+++|||+|+||||+||+++||||+++|+|++|+|.||++||||||+||
T Consensus 197 ~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 197 RLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp HHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred HHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHH
Confidence 9999887 4678899999999998888899999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcccCcccccccCCCCceEEEEEeeCCCCCc-eecC-------CCCCCcccccHHHHHHHHHH
Q 018025 286 AWSNDVYKSVEHRVVTNPSTERFSIAYFFCPSYDT-VIQN-------SEPSNYRKFSFREFRLQVQE 344 (362)
Q Consensus 286 ~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~-~I~~-------~~p~~y~~~t~~ey~~~~~~ 344 (362)
+||||+||||+|||+.+++.+|||+|||++|+.|+ +|+| .+|++|+++|++||++.++.
T Consensus 277 ~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~ 343 (356)
T 1gp6_A 277 ILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLF 343 (356)
T ss_dssp HHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred HhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHH
Confidence 99999999999999999889999999999999999 9998 37899999999999988664
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8e-72 Score=532.52 Aligned_cols=279 Identities=23% Similarity=0.422 Sum_probs=241.6
Q ss_pred CCCCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhCCChhhhcccccccC
Q 018025 56 EECELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMN 135 (362)
Q Consensus 56 ~~~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~lP~e~K~~~~~~~~ 135 (362)
...+||||||+.+.. ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++. .
T Consensus 3 ~~~~iPvIDls~~~~--------~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~---~ 71 (312)
T 3oox_A 3 STSAIDPVSFSLYAK--------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYA---G 71 (312)
T ss_dssp -CCSSCCEETHHHHH--------CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGB---S
T ss_pred CCCCCCeEEChHhcc--------cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhc---c
Confidence 357899999998852 46788999999999999999999999999999999999999999999999872 2
Q ss_pred CCCCCccCC---CCCcccCcCCCccccccCCCC------------CccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 018025 136 FPAGSYRWG---TPTATCLNQLSWSEAFHIPMA------------DISASAAAFTTLSSTLEQFATTVAGLARKLTAILA 200 (362)
Q Consensus 136 ~~~~~~~~g---~~~~~~~~~~d~~E~f~i~~~------------~~~~~~~~~~~fr~~~e~y~~~~~~la~~Ll~~la 200 (362)
.+....||. ..........||+|.|+++.. +..||.+ +|+||+++++|+++|.+|+.+|+++||
T Consensus 72 ~~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~-~p~fr~~~~~y~~~~~~l~~~ll~~la 150 (312)
T 3oox_A 72 VKGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAE-IPAFKHDVSWLYNSLDGMGGKVLEAIA 150 (312)
T ss_dssp SGGGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTT-STTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCc-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122223342 222223346899999988541 2345554 799999999999999999999999999
Q ss_pred HHcCCCchhhhhccCCCcceeEeeccCCCCCCCCCCcccCcccCCcEEEEeeCCCCceEEE-eCCeEEEecCCCCcEEEe
Q 018025 201 EKLGRESTFFQENCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDSDFLTILHQDEVGGLQLV-KDGKWIAVKPNPEALIVN 279 (362)
Q Consensus 201 ~~Lgl~~~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqv~-~~g~W~~V~p~pg~lvVn 279 (362)
++||+++++|.+.+..+.+.||++|||||+.++...|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++|||
T Consensus 151 ~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVN 230 (312)
T 3oox_A 151 TYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVIN 230 (312)
T ss_dssp HHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEE
T ss_pred HHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEE
Confidence 9999999999999988889999999999987655699999999999999999999999997 789999999999999999
Q ss_pred ccchhhhhcCCcccCcccccccCC----CCceEEEEEeeCCCCCceecC-------CCCCCcc-cccHHHHHHHHHHHH
Q 018025 280 IGDLFQAWSNDVYKSVEHRVVTNP----STERFSIAYFFCPSYDTVIQN-------SEPSNYR-KFSFREFRLQVQEDV 346 (362)
Q Consensus 280 vGd~l~~~TnG~~kS~~HRVv~~~----~~~R~Sia~F~~P~~d~~I~~-------~~p~~y~-~~t~~ey~~~~~~~~ 346 (362)
|||+||+||||+||||+|||+.++ +.+|||+|||++|+.|++|+| .+|++|+ ++|++||++++.+++
T Consensus 231 iGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 231 IGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp ECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 999999999999999999998774 467999999999999999998 4789999 999999999888643
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.4e-71 Score=531.69 Aligned_cols=272 Identities=30% Similarity=0.559 Sum_probs=237.4
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhCCChhhhcccccccCCC
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFP 137 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~lP~e~K~~~~~~~~~~ 137 (362)
.+||||||+.+.. .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++. ..
T Consensus 2 ~~iPvIDls~l~~-------~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~---~~- 70 (319)
T 1w9y_A 2 ENFPIISLDKVNG-------VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKEL---VA- 70 (319)
T ss_dssp CCCCEEEGGGGGS-------TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH---HH-
T ss_pred CCCCEEECcccCc-------ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhc---cC-
Confidence 4799999999852 347789999999999999999999999999999999999999999999999862 11
Q ss_pred CCCccCCCCCcccCcCCCccccccCCCC----CccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhc
Q 018025 138 AGSYRWGTPTATCLNQLSWSEAFHIPMA----DISASAAAFTTLSSTLEQFATTVAGLARKLTAILAEKLGRESTFFQEN 213 (362)
Q Consensus 138 ~~~~~~g~~~~~~~~~~d~~E~f~i~~~----~~~~~~~~~~~fr~~~e~y~~~~~~la~~Ll~~la~~Lgl~~~~f~~~ 213 (362)
.. +|+... ...+..||+|.|.+... ...||.. +++||+++++|+++|.+|+.+|+++||++||+++++|.+.
T Consensus 71 ~~--Gy~~~~-~e~~~~d~ke~~~~~~~p~~~~~~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 146 (319)
T 1w9y_A 71 SK--ALEGVQ-AEVTDMDWESTFFLKHLPISNISEVPDL-DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNA 146 (319)
T ss_dssp HH--HHTTCC-CCGGGCCCCEEEEEEEESCCGGGGCTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred CC--CCCccc-ccCCCCChhhheeeecCCcccccccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 11 232221 12356899999988642 2345544 7999999999999999999999999999999999999988
Q ss_pred cCC---CcceeEeeccCCCCCCCCCCcccCcccCCcEEEEeeC-CCCceEEEeCCeEEEecCCCCcEEEeccchhhhhcC
Q 018025 214 CLP---STCYLRMNRYPPCPVPSAIHGLMPHTDSDFLTILHQD-EVGGLQLVKDGKWIAVKPNPEALIVNIGDLFQAWSN 289 (362)
Q Consensus 214 ~~~---~~~~lrl~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqv~~~g~W~~V~p~pg~lvVnvGd~l~~~Tn 289 (362)
+.. ..+.||++|||||+.++...|+++|||+|+||||+|| +++||||+++|+|++|+|.||++||||||+||+|||
T Consensus 147 ~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~Sn 226 (319)
T 1w9y_A 147 FYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITN 226 (319)
T ss_dssp HHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTT
T ss_pred hcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhC
Confidence 763 5578999999999988778999999999999999995 799999999999999999999999999999999999
Q ss_pred CcccCcccccccCCCCceEEEEEeeCCCCCceecC-------C---CCCCcccccHHHHHHHHHH
Q 018025 290 DVYKSVEHRVVTNPSTERFSIAYFFCPSYDTVIQN-------S---EPSNYRKFSFREFRLQVQE 344 (362)
Q Consensus 290 G~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~I~~-------~---~p~~y~~~t~~ey~~~~~~ 344 (362)
|+||||+|||+.+++.+|||+|||++|+.|++|.| . +|++|+++|++||++.+..
T Consensus 227 G~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~ 291 (319)
T 1w9y_A 227 GKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAG 291 (319)
T ss_dssp TSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTT
T ss_pred CeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHh
Confidence 99999999999998899999999999999999998 2 3899999999999887653
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.7e-68 Score=513.36 Aligned_cols=279 Identities=22% Similarity=0.312 Sum_probs=240.7
Q ss_pred cCCCCCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHh-hCCChhhhccccc
Q 018025 54 LVEECELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKV-FKQPFDKKSKEDK 132 (362)
Q Consensus 54 ~~~~~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~f-F~lP~e~K~~~~~ 132 (362)
.+...+||||||+.|..+ ++++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.
T Consensus 3 s~~~~~iPvIDls~l~~~----~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~- 74 (331)
T 1odm_A 3 SVSKANVPKIDVSPLFGD----DQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLA- 74 (331)
T ss_dssp CCCBCCCCEEECGGGGSS----CHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHB-
T ss_pred cccCCCCCEEEchHhcCC----ChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhh-
Confidence 345578999999999766 67889999999999999999999999999 999999999999 999999999972
Q ss_pred ccCCCCCCccCCCCCccc------CcCCCccccccCCCC----------------Cccccch-hhhhhHHHHHHHHHHHH
Q 018025 133 FMNFPAGSYRWGTPTATC------LNQLSWSEAFHIPMA----------------DISASAA-AFTTLSSTLEQFATTVA 189 (362)
Q Consensus 133 ~~~~~~~~~~~g~~~~~~------~~~~d~~E~f~i~~~----------------~~~~~~~-~~~~fr~~~e~y~~~~~ 189 (362)
. .+..+++...... ....||+|.|.++.. ...||.. .+|+||+++++|+++|.
T Consensus 75 --~--~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~ 150 (331)
T 1odm_A 75 --I--RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVF 150 (331)
T ss_dssp --C--TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHH
T ss_pred --h--cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 1 1111222221111 146799999998743 2335542 27899999999999999
Q ss_pred HHHHHHHHHHHHHcCCCchhhhhccCCCcceeE--eeccC------C---CCCCCC-CCcccCcccCCcEEEEeeCCCCc
Q 018025 190 GLARKLTAILAEKLGRESTFFQENCLPSTCYLR--MNRYP------P---CPVPSA-IHGLMPHTDSDFLTILHQDEVGG 257 (362)
Q Consensus 190 ~la~~Ll~~la~~Lgl~~~~f~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~g~~~HtD~~~lTlL~qd~~~G 257 (362)
+|+.+|+++||++||+++++|.+.+..+.+.|| ++||| | |+.++. ..|+++|||+|+||||+||+++|
T Consensus 151 ~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~G 230 (331)
T 1odm_A 151 GLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQN 230 (331)
T ss_dssp HHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCC
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCC
Confidence 999999999999999999999999988889999 99999 7 776665 78999999999999999999999
Q ss_pred eEEE-eCCeEEEecCCCCcEEEeccchhhhhcCCcccCcccccccCCCCceEEEEEeeCCCCCceecC-C-----CCCCc
Q 018025 258 LQLV-KDGKWIAVKPNPEALIVNIGDLFQAWSNDVYKSVEHRVVTNPSTERFSIAYFFCPSYDTVIQN-S-----EPSNY 330 (362)
Q Consensus 258 Lqv~-~~g~W~~V~p~pg~lvVnvGd~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~I~~-~-----~p~~y 330 (362)
|||+ ++| |++|+|.||++||||||+||+||||+||||+|||+.+ +.+|||+|||++|+.|++|+| . +.++|
T Consensus 231 LQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~~~y 308 (331)
T 1odm_A 231 LQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGKSDR 308 (331)
T ss_dssp EEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCCCSS
T ss_pred EEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccccCC
Confidence 9999 788 9999999999999999999999999999999999865 689999999999999999998 1 12789
Q ss_pred ccccHHHHHHHHHHHH
Q 018025 331 RKFSFREFRLQVQEDV 346 (362)
Q Consensus 331 ~~~t~~ey~~~~~~~~ 346 (362)
+++|++||++.+.+..
T Consensus 309 ~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 309 EPLSYGDYLQNGLVSL 324 (331)
T ss_dssp CCCBHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHH
Confidence 9999999998887643
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3.9e-67 Score=499.64 Aligned_cols=268 Identities=17% Similarity=0.239 Sum_probs=222.9
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhCCC-hhhhcccccccCC
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQP-FDKKSKEDKFMNF 136 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~lP-~e~K~~~~~~~~~ 136 (362)
.+||||||+.+.++ +.. ++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++. ...
T Consensus 3 ~~iPvIDls~l~~~----~~~------~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~--~~~ 70 (311)
T 1dcs_A 3 TTVPTFSLAELQQG----LHQ------DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVT--SPV 70 (311)
T ss_dssp CCCCEEEHHHHHTT----CSH------HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTB--CSS
T ss_pred CCCcEEEchhhcCC----CHH------HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhh--ccC
Confidence 47999999998644 222 289999999999999999999999999999999999999 99999872 111
Q ss_pred CCCCccCCCCCcc-------cCcCCCccccccCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCC----
Q 018025 137 PAGSYRWGTPTAT-------CLNQLSWSEAFHIPMADISASAAAFTTLSSTLEQFATTVAGLARKLTAILAEKLGR---- 205 (362)
Q Consensus 137 ~~~~~~~g~~~~~-------~~~~~d~~E~f~i~~~~~~~~~~~~~~fr~~~e~y~~~~~~la~~Ll~~la~~Lgl---- 205 (362)
.....||+..... ..+..||+|.|.++..+..|| +++||+.+++|+++|.+|+.+|+++||++||+
T Consensus 71 ~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~~n~wP---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 147 (311)
T 1dcs_A 71 PTMRRGFTGLESESTAQITNTGSYSDYSMCYSMGTADNLFP---SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDG 147 (311)
T ss_dssp CCSSSEEEEC-----------------CEEEEECSSSCCCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred CCCCCceeeccccccccccCCCCCCCcceeeeccCCCCCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 2233455433221 134689999999998777787 78999999999999999999999999999999
Q ss_pred CchhhhhccCCCcceeEeeccCCCCCCC--C--CCcccCcccCCcEEEEeeC-CCCc---eEEEeCCeEEEecCCCCcEE
Q 018025 206 ESTFFQENCLPSTCYLRMNRYPPCPVPS--A--IHGLMPHTDSDFLTILHQD-EVGG---LQLVKDGKWIAVKPNPEALI 277 (362)
Q Consensus 206 ~~~~f~~~~~~~~~~lrl~~Yp~~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---Lqv~~~g~W~~V~p~pg~lv 277 (362)
++++|.+. .+.||++|||||+.++ + ..|+++|||+|+||||+|| .++| |||+.+|+|++|+|.||++|
T Consensus 148 ~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lv 223 (311)
T 1dcs_A 148 GVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVL 223 (311)
T ss_dssp CHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEE
T ss_pred cHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEE
Confidence 78888765 7789999999998763 3 6789999999999999999 8999 99999999999999999999
Q ss_pred EeccchhhhhcCCcccCcccccccCC-----CCceEEEEEeeCCCCCceecC------CCCCCc--ccccHHHHHHHHHH
Q 018025 278 VNIGDLFQAWSNDVYKSVEHRVVTNP-----STERFSIAYFFCPSYDTVIQN------SEPSNY--RKFSFREFRLQVQE 344 (362)
Q Consensus 278 VnvGd~l~~~TnG~~kS~~HRVv~~~-----~~~R~Sia~F~~P~~d~~I~~------~~p~~y--~~~t~~ey~~~~~~ 344 (362)
|||||+||+||||+||||+|||+.++ +.+|||+|||++|+.|++|.. .+|++| +++|++||++++.+
T Consensus 224 VNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~l~~~~~~~~p~~y~~~~~t~~ey~~~~~~ 303 (311)
T 1dcs_A 224 VFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDGETATFQDWIGGNYV 303 (311)
T ss_dssp EEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEEHHHHHHTTCCCCCCSSEEEHHHHHCSSCC
T ss_pred EEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEeCCcccCCCCccccCCCCccHHHHHHHHHH
Confidence 99999999999999999999999987 679999999999999999972 578999 99999999876543
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=9.2e-66 Score=483.17 Aligned_cols=259 Identities=23% Similarity=0.349 Sum_probs=216.8
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhCCChhhhcccccccCCC
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFP 137 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~lP~e~K~~~~~~~~~~ 137 (362)
++||||||+... .+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++ ...+
T Consensus 2 ~~IPvIDls~~~-------------~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~---~~~~ 63 (280)
T 3on7_A 2 MKLETIDYRAAD-------------SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEF---MFNR 63 (280)
T ss_dssp --CCEEETTSTT-------------HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGG---BCCT
T ss_pred CCCCEEECCChh-------------HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHh---ccCC
Confidence 479999999642 3679999999999999999999999999999999999997 788876 2222
Q ss_pred CCCccCCCCC----cccCcCCCccccccCCCCCccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--hh--
Q 018025 138 AGSYRWGTPT----ATCLNQLSWSEAFHIPMADISASAAAFTTLSSTLEQFATTVAGLARKLTAILAEKLGRES--TF-- 209 (362)
Q Consensus 138 ~~~~~~g~~~----~~~~~~~d~~E~f~i~~~~~~~~~~~~~~fr~~~e~y~~~~~~la~~Ll~~la~~Lgl~~--~~-- 209 (362)
....||+... .......||+|.|++. +|+. .+++||+++++|+++|.+|+.+|+++||++||++. .+
T Consensus 64 ~~~~GY~~~~~~e~~~~~~~~D~kE~~~~~----p~~~-~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~ 138 (280)
T 3on7_A 64 ETHDGFFPASISETAKGHTVKDIKEYYHVY----PWGR-IPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSI 138 (280)
T ss_dssp TTCCEEECCC--------CCCCSCEEEEEC----TTSC-CCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSS
T ss_pred CCCCccccCccccccCCCCcccHHHHHhcC----CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhH
Confidence 3334454332 1123468999999875 2332 36899999999999999999999999999999762 33
Q ss_pred -hhhccCCCc-ceeEeeccCCCCCCC--CCCcccCcccCCcEEEEeeCCCCceEEE-eCCeEEEecCCCCcEEEeccchh
Q 018025 210 -FQENCLPST-CYLRMNRYPPCPVPS--AIHGLMPHTDSDFLTILHQDEVGGLQLV-KDGKWIAVKPNPEALIVNIGDLF 284 (362)
Q Consensus 210 -f~~~~~~~~-~~lrl~~Yp~~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqv~-~~g~W~~V~p~pg~lvVnvGd~l 284 (362)
|.+.+..+. +.||++|||||+.++ ...|+++|||+|+||||+||+++||||+ ++|+|++|+|.||++||||||+|
T Consensus 139 ~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l 218 (280)
T 3on7_A 139 PLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDML 218 (280)
T ss_dssp CHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHH
T ss_pred HHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHH
Confidence 445555554 899999999998754 4789999999999999999999999999 79999999999999999999999
Q ss_pred hhhcCCcccCcccccccCC----CCceEEEEEeeCCCCCceecCCCCCCcccccHHHHHHHHHHHH
Q 018025 285 QAWSNDVYKSVEHRVVTNP----STERFSIAYFFCPSYDTVIQNSEPSNYRKFSFREFRLQVQEDV 346 (362)
Q Consensus 285 ~~~TnG~~kS~~HRVv~~~----~~~R~Sia~F~~P~~d~~I~~~~p~~y~~~t~~ey~~~~~~~~ 346 (362)
|+||||+||||+|||+.++ ..+|||+|||++|+.|++|.| ++|++||++++.++.
T Consensus 219 ~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p-------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 219 QEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE-------RYTADSYLMERLREL 277 (280)
T ss_dssp HHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS-------SCBHHHHHHHHHHHT
T ss_pred HHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC-------CccHHHHHHHHHHHh
Confidence 9999999999999999874 458999999999999999986 699999999988743
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=96.13 E-value=0.066 Score=48.29 Aligned_cols=182 Identities=19% Similarity=0.267 Sum_probs=96.9
Q ss_pred HHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhCCChhhhcccccccCCCCCCccCCCCCcccCcCCCccccccCC
Q 018025 84 KEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPTATCLNQLSWSEAFHIP 163 (362)
Q Consensus 84 ~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~E~f~i~ 163 (362)
...|.+++.+.|++++.| -++++.++.+.+.++.+-.. .+.+ ....+.+. . . . .+ .+.
T Consensus 16 ~~~i~~~L~~~g~~Vid~-fLs~ee~~~L~~~~~~~~~~---g~~~--------~a~i~~~~-~-~--~----~~--~iR 73 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDD-FLGKETGQQIGDEVRALHDT---GKFT--------DGQLVSQK-S-D--S----SK--DIR 73 (247)
T ss_dssp HHTHHHHHHHTSEEEESS-SSCHHHHHHHHHHHHHHHHT---TCSC--------SCCEEECC-S-S--S----TT--CEE
T ss_pred HHHHHHHhccCCEEEECC-CCCHHHHHHHHHHHHhhhhc---CCcc--------cccccccc-c-c--c----cc--ccc
Confidence 457888999999887554 48999999999888774210 0000 00000000 0 0 0 00 001
Q ss_pred CCCccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhccCCCcceeEeeccCCCCCCCCCCcccCccc
Q 018025 164 MADISASAAAFTTLSSTLEQFATTVAGLARKLTAILAEKLGRESTFFQENCLPSTCYLRMNRYPPCPVPSAIHGLMPHTD 243 (362)
Q Consensus 164 ~~~~~~~~~~~~~fr~~~e~y~~~~~~la~~Ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD 243 (362)
.+.+.|.+...+. .+.+..|.+.|.++.. .+...+|+.. . ....-+.+.+|++. .-....|.|
T Consensus 74 ~d~i~wl~~~~~~-~~~~~~l~~~i~~l~~----~ln~~lGl~~------i-~~~~e~~~~~Y~~~-----G~~y~~H~D 136 (247)
T 2hbt_A 74 GDKITWIEGKEPG-CETIGLLMSSMDDLIR----HCNGKLGSYK------I-NGRTKAMVACYPGN-----GTGYVRHVD 136 (247)
T ss_dssp CCEEEEECSCSTT-CHHHHHHHHHHHHHHH----HTTTTSTTCC------E-EEECCEEEEEECSS-----SCCEEEECS
T ss_pred ccceeeecccccc-hhHHHHHHHHHHHHHH----HHhhhcCccc------c-cccceEEEEEecCC-----CCccccccc
Confidence 1122232221111 1223334444444332 2222233210 0 01133678899861 123457777
Q ss_pred C-----CcEEEEee--CC-----CCc-eEEEeCC--eEEEecCCCCcEEEeccchhhhhcCCcccCcccccccCCCCceE
Q 018025 244 S-----DFLTILHQ--DE-----VGG-LQLVKDG--KWIAVKPNPEALIVNIGDLFQAWSNDVYKSVEHRVVTNPSTERF 308 (362)
Q Consensus 244 ~-----~~lTlL~q--d~-----~~G-Lqv~~~g--~W~~V~p~pg~lvVnvGd~l~~~TnG~~kS~~HRVv~~~~~~R~ 308 (362)
. -.+|+++. +. .|| |.+..++ ....|.|..|.+|+.-.+ . -.+|.|.. ....|+
T Consensus 137 ~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-------~---~~~H~V~p-~~~~R~ 205 (247)
T 2hbt_A 137 NPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-------R---RNPHEVQP-AYATRY 205 (247)
T ss_dssp SCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-------T---TCCEEECC-BSSCEE
T ss_pred CCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-------C---Cceeeecc-CCCEEE
Confidence 6 36888875 21 255 7777544 678999999999996432 1 15899965 557999
Q ss_pred EEEEeeC
Q 018025 309 SIAYFFC 315 (362)
Q Consensus 309 Sia~F~~ 315 (362)
||+..+.
T Consensus 206 sit~W~~ 212 (247)
T 2hbt_A 206 AITVWYF 212 (247)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9998765
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.40 E-value=0.044 Score=49.39 Aligned_cols=78 Identities=22% Similarity=0.174 Sum_probs=54.5
Q ss_pred eeEeeccCCCCCCCCCCcccCcccCC-----------cEEEEee--C--C-CCc-eEEEeCCeEEEecCCCCcEEEeccc
Q 018025 220 YLRMNRYPPCPVPSAIHGLMPHTDSD-----------FLTILHQ--D--E-VGG-LQLVKDGKWIAVKPNPEALIVNIGD 282 (362)
Q Consensus 220 ~lrl~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d--~-~~G-Lqv~~~g~W~~V~p~pg~lvVnvGd 282 (362)
-+++++|.+-. -..+|.|.. .+|+++. | . .|| |.+.....=..|+|..|.+|+.-.
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 48899997742 235777763 5677664 3 1 234 666655445789999999999532
Q ss_pred hhhhhcCCcccCcccccccCCCCceEEEEEeeC
Q 018025 283 LFQAWSNDVYKSVEHRVVTNPSTERFSIAYFFC 315 (362)
Q Consensus 283 ~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~ 315 (362)
.++|+|......+|+++..+++
T Consensus 173 -----------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 -----------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp -----------TSEEEECCEEEECEEEEEEEEE
T ss_pred -----------CCeEcCccccccCEEEEEEehh
Confidence 3689997655579999999986
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.61 E-value=0.8 Score=40.20 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=51.4
Q ss_pred eEeeccCCCCCCCCCCcccCcccC-CcEEEEee---C-CCCceEEEeC-------------------CeEEEecCCCCcE
Q 018025 221 LRMNRYPPCPVPSAIHGLMPHTDS-DFLTILHQ---D-EVGGLQLVKD-------------------GKWIAVKPNPEAL 276 (362)
Q Consensus 221 lrl~~Yp~~~~~~~~~g~~~HtD~-~~lTlL~q---d-~~~GLqv~~~-------------------g~W~~V~p~pg~l 276 (362)
.-.+.|++... ...|.+. +.|+..+. . +.|.|.+... ..+..|.|.+|.+
T Consensus 105 ~W~~~~~~G~~------~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~l 178 (216)
T 2rg4_A 105 IWINILPEGGV------HGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDV 178 (216)
T ss_dssp EEEEEECTTCC------EEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEE
T ss_pred EEEEEcCCCCc------ccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeE
Confidence 55677766432 2456664 45554442 2 2345777632 4667899999999
Q ss_pred EEeccchhhhhcCCcccCcccccccCCC-CceEEEEEeeCCCC
Q 018025 277 IVNIGDLFQAWSNDVYKSVEHRVVTNPS-TERFSIAYFFCPSY 318 (362)
Q Consensus 277 vVnvGd~l~~~TnG~~kS~~HRVv~~~~-~~R~Sia~F~~P~~ 318 (362)
||.-.. ..|.|..... .+|+||+|-+.|..
T Consensus 179 vlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 179 LLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp EEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred EEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 995442 3699977654 68999999998765
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=91.44 E-value=0.53 Score=41.45 Aligned_cols=85 Identities=15% Similarity=0.105 Sum_probs=53.1
Q ss_pred eeEeeccCCCCCCCCCCcccCcccCC-----------cEEEEee--C-CCCceEEEeCCeEEEecCCCCcEEEeccchhh
Q 018025 220 YLRMNRYPPCPVPSAIHGLMPHTDSD-----------FLTILHQ--D-EVGGLQLVKDGKWIAVKPNPEALIVNIGDLFQ 285 (362)
Q Consensus 220 ~lrl~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d-~~~GLqv~~~g~W~~V~p~pg~lvVnvGd~l~ 285 (362)
-+++++|.+... ..+|.|+. .+|+|+. | ..||=-+..+. =+.|+|..|.+|+.-.
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~f~~---- 180 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVYFEY---- 180 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEEEEC----
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC-CCEEecCCCeEEEEec----
Confidence 488889976421 35677753 4788875 3 23442233322 2689999999998432
Q ss_pred hhcCCc-ccCcccccccCCCCceEEEEEeeC
Q 018025 286 AWSNDV-YKSVEHRVVTNPSTERFSIAYFFC 315 (362)
Q Consensus 286 ~~TnG~-~kS~~HRVv~~~~~~R~Sia~F~~ 315 (362)
...+|. -..++|+|.......|+++..+++
T Consensus 181 ~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 181 FYQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp CCSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred cCCCCCCCCccccccceeccccEEEEEeeEe
Confidence 111232 246899996655578999988875
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=90.96 E-value=0.54 Score=41.31 Aligned_cols=88 Identities=19% Similarity=0.214 Sum_probs=54.9
Q ss_pred eeEeeccCCCCCCCCCCcccCcccC--------------CcEEEEee--C-CCCc-eEEEeCC-------------eEEE
Q 018025 220 YLRMNRYPPCPVPSAIHGLMPHTDS--------------DFLTILHQ--D-EVGG-LQLVKDG-------------KWIA 268 (362)
Q Consensus 220 ~lrl~~Yp~~~~~~~~~g~~~HtD~--------------~~lTlL~q--d-~~~G-Lqv~~~g-------------~W~~ 268 (362)
-+++++|.+-. ...+|.|+ .++|+|+. | ..|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 37888887632 13466664 35888864 3 2344 4442211 2489
Q ss_pred ecCCCCcEEEeccchhhhhcCCcc-cCcccccccCCCCceEEEEEeeCCC
Q 018025 269 VKPNPEALIVNIGDLFQAWSNDVY-KSVEHRVVTNPSTERFSIAYFFCPS 317 (362)
Q Consensus 269 V~p~pg~lvVnvGd~l~~~TnG~~-kS~~HRVv~~~~~~R~Sia~F~~P~ 317 (362)
|+|..|.+|+.-- ...+|.. ..++|+|......+|+++..+++-.
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 9999999988432 1123433 6789999665557899999887643
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=78.12 E-value=13 Score=31.94 Aligned_cols=79 Identities=11% Similarity=0.203 Sum_probs=50.5
Q ss_pred eEeeccCCCCCCCCCCcccCcccCC--------cEEEEeeCCCCceEEEe----------CCeEEEecCCCCcEEEeccc
Q 018025 221 LRMNRYPPCPVPSAIHGLMPHTDSD--------FLTILHQDEVGGLQLVK----------DGKWIAVKPNPEALIVNIGD 282 (362)
Q Consensus 221 lrl~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqv~~----------~g~W~~V~p~pg~lvVnvGd 282 (362)
+-+|+|.+-. -++++|.|-. +++|=+ ....-+.+.. .+..+.+...+|+++|.-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSL-G~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSF-GASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEE-ESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEEC-CCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 5689997632 3678888862 122222 1112234432 12578899999999999998
Q ss_pred hhhhhcCCcccCcccccccCC--CCceEEEEEe
Q 018025 283 LFQAWSNDVYKSVEHRVVTNP--STERFSIAYF 313 (362)
Q Consensus 283 ~l~~~TnG~~kS~~HRVv~~~--~~~R~Sia~F 313 (362)
+=..|. |.|-... ...|+|+.|-
T Consensus 176 ~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhheeE--------eeccccCCCCCCEEEEEee
Confidence 887787 5553322 3689999984
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=75.65 E-value=22 Score=31.26 Aligned_cols=84 Identities=14% Similarity=0.213 Sum_probs=53.6
Q ss_pred eeEeeccCCCCCCCCCCcccCcccCC--------cEEEEeeCCCCceEEEe-C----------CeEEEecCCCCcEEEec
Q 018025 220 YLRMNRYPPCPVPSAIHGLMPHTDSD--------FLTILHQDEVGGLQLVK-D----------GKWIAVKPNPEALIVNI 280 (362)
Q Consensus 220 ~lrl~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqv~~-~----------g~W~~V~p~pg~lvVnv 280 (362)
.+-+|+|++-. -++++|.|-. +.||=+- ...=+.+.. . +..+.+.-.+|+++|+-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 45789997642 3678888852 2233221 112233332 1 46899999999999999
Q ss_pred cchhhhhcCCcccCcccccccCCCCceEEEEEeeC
Q 018025 281 GDLFQAWSNDVYKSVEHRVVTNPSTERFSIAYFFC 315 (362)
Q Consensus 281 Gd~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~ 315 (362)
|+.=..|..|.-+.. .....|+|+.|=.-
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998888875443321 13568999999653
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=74.67 E-value=15 Score=31.82 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=49.2
Q ss_pred eeEeeccCCCCCCCCCCcccCcccC-----C--cEEEEeeCCCCceEEE---eCCeEEEecCCCCcEEEeccchhhhhcC
Q 018025 220 YLRMNRYPPCPVPSAIHGLMPHTDS-----D--FLTILHQDEVGGLQLV---KDGKWIAVKPNPEALIVNIGDLFQAWSN 289 (362)
Q Consensus 220 ~lrl~~Yp~~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~~GLqv~---~~g~W~~V~p~pg~lvVnvGd~l~~~Tn 289 (362)
.+-+|+|.+- . ++++|.|- + ++||-+- ...-+.+. +.+..+.+...+|+++|.-|+.- .|.
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~~- 176 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LFY- 176 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TCC-
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ceE-
Confidence 3678999763 2 78899983 1 2233221 11223333 23678899999999999988763 343
Q ss_pred CcccCcccccccCC-------CCceEEEEEee
Q 018025 290 DVYKSVEHRVVTNP-------STERFSIAYFF 314 (362)
Q Consensus 290 G~~kS~~HRVv~~~-------~~~R~Sia~F~ 314 (362)
|.|.... +..|+|+.|-.
T Consensus 177 -------H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 177 -------HGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -------EEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -------eccCcccCCcCCCCCCCEEEEEeee
Confidence 6664432 24699999864
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=71.64 E-value=6 Score=37.16 Aligned_cols=92 Identities=17% Similarity=0.244 Sum_probs=60.1
Q ss_pred eeEeeccCCCCCCCCCCcccCcccCC------cEEEEeeCCCCceEEE-eCCeEEEecCCCCcEEEeccchhhhhcCCcc
Q 018025 220 YLRMNRYPPCPVPSAIHGLMPHTDSD------FLTILHQDEVGGLQLV-KDGKWIAVKPNPEALIVNIGDLFQAWSNDVY 292 (362)
Q Consensus 220 ~lrl~~Yp~~~~~~~~~g~~~HtD~~------~lTlL~qd~~~GLqv~-~~g~W~~V~p~pg~lvVnvGd~l~~~TnG~~ 292 (362)
.+-+|+|.+- -++++|.|.. ++||=+ ....-+.+. ++|.++.+...+|+++|+-|+.-..|..|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4678999762 2788999884 222222 112224444 3577999999999999999999999987755
Q ss_pred cCccccccc------------------CCCCceEEEEEeeCCCC
Q 018025 293 KSVEHRVVT------------------NPSTERFSIAYFFCPSY 318 (362)
Q Consensus 293 kS~~HRVv~------------------~~~~~R~Sia~F~~P~~ 318 (362)
+-...-+-. .+...|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 443332210 01246999999876654
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=45.19 E-value=6.8 Score=38.10 Aligned_cols=57 Identities=11% Similarity=0.188 Sum_probs=41.5
Q ss_pred cCCCCCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhC
Q 018025 54 LVEECELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFK 121 (362)
Q Consensus 54 ~~~~~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~ 121 (362)
.....-||.||++.+.++. ++ ++..+.+++.|++.|.|. ||.+...+..+...+|.+
T Consensus 95 ~~G~~~iP~i~f~di~~~~--~s--------~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 95 AQGDAVWPVLSYADIKAGH--VT--------AEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp HTTCCSSCEEEHHHHHHTC--CC--------HHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred hcCCCCcceecHHHhcCCC--CC--------HHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 3466789999999986441 11 234455788999987764 799988888888888763
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=43.64 E-value=14 Score=35.11 Aligned_cols=51 Identities=16% Similarity=0.188 Sum_probs=38.2
Q ss_pred CCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHHHHHHHHHhhC
Q 018025 59 ELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFK 121 (362)
Q Consensus 59 ~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~~~~~~~~fF~ 121 (362)
++|.||++.+..+ .+...++.+|+.++|++.+.|-.++.+...+ .+++|=.
T Consensus 122 ~~~~~~~~~~l~~---------d~~~~~~~~~l~~~Gvv~frg~~~~~~~~~~---~a~~~G~ 172 (388)
T 3o2g_A 122 QLPTLDFEDVLRY---------DEHAYKWLSTLKKVGIVRLTGASDKPGEVSK---LGKRMGF 172 (388)
T ss_dssp CCCEEEHHHHHHC---------HHHHHHHHHHHHHHSEEEEECCCSSTTHHHH---HHHHHSC
T ss_pred CCCccCHHHHhcC---------HHHHHHHHHHHHhcCEEEEeCCCCCHHHHHH---HHHHhCC
Confidence 7999999987643 2456789999999999999999888655444 3555543
No 18
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=38.86 E-value=71 Score=32.25 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCCCchhhhhccCCCcceeEeeccCCCCCCCCCCcccCcccC-C--cEEEEee----C-----CCCc-eEE
Q 018025 194 KLTAILAEKLGRESTFFQENCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDS-D--FLTILHQ----D-----EVGG-LQL 260 (362)
Q Consensus 194 ~Ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~-~--~lTlL~q----d-----~~~G-Lqv 260 (362)
.++..|+...|++. ..+...-+-+++|++- ..+..|.|. + .||+++. | ..|| |++
T Consensus 105 ~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK------LSGSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHTCCC------CCSSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHhCCcc------cCCCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 34566666677632 1001112566777653 235688884 1 3555552 2 1344 888
Q ss_pred EeC--------CeEEEecCCCCcEEEeccchhhhhcC-CcccCcccccccC-CCCceEEEEEeeC
Q 018025 261 VKD--------GKWIAVKPNPEALIVNIGDLFQAWSN-DVYKSVEHRVVTN-PSTERFSIAYFFC 315 (362)
Q Consensus 261 ~~~--------g~W~~V~p~pg~lvVnvGd~l~~~Tn-G~~kS~~HRVv~~-~~~~R~Sia~F~~ 315 (362)
+.. .-...|.|..|++|+. .+. | ..+|.|... ++..|+||+-.++
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F-------~vsp~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFF-------KVLPG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEE-------ECCTT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEE-------EcCCC---CCcCCCCccCCCCCEEEEEEEec
Confidence 732 2467899999999984 232 2 246766222 1689999986665
No 19
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=37.20 E-value=16 Score=31.42 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=26.8
Q ss_pred CCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCC
Q 018025 59 ELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGI 104 (362)
Q Consensus 59 ~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI 104 (362)
.||++++.... + .++++++.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g------~----~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG------S----PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT------C----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC------c----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 68888876442 1 245778888888888888889995
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=31.51 E-value=22 Score=30.60 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=26.7
Q ss_pred CCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCC
Q 018025 59 ELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGI 104 (362)
Q Consensus 59 ~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI 104 (362)
.||++++.... + .++++++.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g------~----~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG------T----RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT------C----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC------c----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 67888776442 1 246678888888888888889995
No 21
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=31.00 E-value=35 Score=22.37 Aligned_cols=18 Identities=11% Similarity=0.287 Sum_probs=9.7
Q ss_pred ChHHHHHHHHHHHHHhhc
Q 018025 76 DESEREECKEEIARASQQ 93 (362)
Q Consensus 76 d~~~r~~~~~~i~~A~~~ 93 (362)
+++.+++++++|.+++.+
T Consensus 12 s~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 12 TDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 345555555555555544
No 22
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=30.34 E-value=1.2e+02 Score=25.20 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHHHhhccceEEEEc-CCCCHHHHHHHHHHHHH
Q 018025 77 ESEREECKEEIARASQQWGFFQVTN-HGISKDLLEKMREEQVK 118 (362)
Q Consensus 77 ~~~r~~~~~~i~~A~~~~GFF~v~n-HGI~~ell~~~~~~~~~ 118 (362)
.+.+.+.+++|.+.+.+...++|++ +|++.+.+.+++...++
T Consensus 5 ~~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 5 RQQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 4567888999999999999999997 48998888888776654
No 23
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=30.16 E-value=69 Score=27.62 Aligned_cols=40 Identities=8% Similarity=0.087 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHhhccceEEEEc-CCCCHHHHHHHHHHHH
Q 018025 78 SEREECKEEIARASQQWGFFQVTN-HGISKDLLEKMREEQV 117 (362)
Q Consensus 78 ~~r~~~~~~i~~A~~~~GFF~v~n-HGI~~ell~~~~~~~~ 117 (362)
+.+.+..++|.+.+.++..++|++ .|++...+++++...|
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 567788999999999998888886 6999988888876654
No 24
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=29.90 E-value=38 Score=22.16 Aligned_cols=18 Identities=11% Similarity=0.351 Sum_probs=9.8
Q ss_pred ChHHHHHHHHHHHHHhhc
Q 018025 76 DESEREECKEEIARASQQ 93 (362)
Q Consensus 76 d~~~r~~~~~~i~~A~~~ 93 (362)
+++.+++++++|.+++.+
T Consensus 12 s~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 12 TDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 455555555555555544
No 25
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=29.09 E-value=33 Score=30.58 Aligned_cols=44 Identities=16% Similarity=0.198 Sum_probs=33.1
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCCCHHHHHH
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEK 111 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI~~ell~~ 111 (362)
++|+-||++...+ ++ ..++|.+++.++|++.+.+-.++.+...+
T Consensus 16 aei~gvdl~~~l~------~~----~~~~l~~~l~~~Gvv~frg~~~~~~~~~~ 59 (283)
T 1otj_A 16 AQISGADLTRPLS------DN----QFEQLYHAVLRHQVVFLRDQAITPQQQRA 59 (283)
T ss_dssp EEEESCCSSSCCC------HH----HHHHHHHHHHHHSEEEECSCCCCHHHHHH
T ss_pred EEEECCCcCccCC------HH----HHHHHHHHHHHCCEEEECCCCCCHHHHHH
Confidence 4677788888542 22 36789999999999999998888765554
No 26
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=28.01 E-value=31 Score=30.12 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=26.8
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCC
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGI 104 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI 104 (362)
..||++++.... + .++++++.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g------~----~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPG------S----VELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTT------C----HHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCC------c----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 368888876442 1 245677888888888888889995
No 27
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=27.78 E-value=1.2e+02 Score=25.03 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhhccc-eEEEEc-CCCCHHHHHHHHHHHH
Q 018025 78 SEREECKEEIARASQQWG-FFQVTN-HGISKDLLEKMREEQV 117 (362)
Q Consensus 78 ~~r~~~~~~i~~A~~~~G-FF~v~n-HGI~~ell~~~~~~~~ 117 (362)
+.+.+.+++|.+.+.++. .++|++ .|++.+.+.+++...+
T Consensus 4 ~~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 4 KRNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 467788899999999998 777776 5899888887776655
No 28
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=27.54 E-value=51 Score=18.54 Aligned_cols=14 Identities=21% Similarity=0.487 Sum_probs=11.0
Q ss_pred ceEEEeCCeEEEec
Q 018025 257 GLQLVKDGKWIAVK 270 (362)
Q Consensus 257 GLqv~~~g~W~~V~ 270 (362)
-..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35678999999764
No 29
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=26.68 E-value=27 Score=29.75 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=25.0
Q ss_pred CCceE-EcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCC
Q 018025 59 ELPLI-DLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGI 104 (362)
Q Consensus 59 ~lPvI-Dls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI 104 (362)
.||++ ++.... + .++++++.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g------~----~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA------T----EEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS------S----HHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC------c----HHHHHHHHHHhCcCCEEEECCCCc
Confidence 68888 665432 1 245667777777777888889994
No 30
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=26.52 E-value=34 Score=30.75 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=26.9
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCC
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGI 104 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI 104 (362)
..||++|+..+... .+.+++|.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~---------~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALD---------LSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCC---------HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCC---------HHHHHHHHHHhCcCCEEEEcCCce
Confidence 36888887765322 234567777888888899999995
No 31
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=25.86 E-value=62 Score=21.49 Aligned_cols=18 Identities=17% Similarity=0.344 Sum_probs=10.6
Q ss_pred ChHHHHHHHHHHHHHhhc
Q 018025 76 DESEREECKEEIARASQQ 93 (362)
Q Consensus 76 d~~~r~~~~~~i~~A~~~ 93 (362)
+.+.+++++++|.+++.+
T Consensus 11 t~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 11 DVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 456666666666655544
No 32
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=25.37 E-value=27 Score=25.24 Aligned_cols=13 Identities=15% Similarity=0.613 Sum_probs=7.2
Q ss_pred eEEEeCCeEEEec
Q 018025 258 LQLVKDGKWIAVK 270 (362)
Q Consensus 258 Lqv~~~g~W~~V~ 270 (362)
|||.-+|+|++..
T Consensus 37 feV~v~~~WiptR 49 (81)
T 3nrl_A 37 FDVKVKDVWVPVR 49 (81)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEECCEEEEEE
Confidence 5555555555554
No 33
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=23.97 E-value=56 Score=21.21 Aligned_cols=30 Identities=10% Similarity=0.343 Sum_probs=16.1
Q ss_pred CceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhc
Q 018025 60 LPLIDLSRILHNDNVVDESEREECKEEIARASQQ 93 (362)
Q Consensus 60 lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~ 93 (362)
.|.|.+...... +++.+++++++|.+++.+
T Consensus 3 MP~i~i~~~~g~----s~e~k~~l~~~l~~~l~~ 32 (63)
T 2x4k_A 3 MPIVNVKLLEGR----SDEQLKNLVSEVTDAVEK 32 (63)
T ss_dssp CCEEEEEEESCC----CHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCC----CHHHHHHHHHHHHHHHHH
Confidence 356666544322 455566666666665544
No 34
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=23.43 E-value=57 Score=21.81 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=10.1
Q ss_pred ChHHHHHHHHHHHHHhhc
Q 018025 76 DESEREECKEEIARASQQ 93 (362)
Q Consensus 76 d~~~r~~~~~~i~~A~~~ 93 (362)
+++.+++++++|.+++.+
T Consensus 12 s~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 12 SPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 455566666655555544
No 35
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=22.60 E-value=49 Score=29.75 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=33.9
Q ss_pred CCCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCC-CCHHHHHHHHHHHHHh
Q 018025 58 CELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHG-ISKDLLEKMREEQVKV 119 (362)
Q Consensus 58 ~~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHG-I~~ell~~~~~~~~~f 119 (362)
++|+-||++...+ + +..++|.+++.++|++.+.+-. ++.+... +.++.|
T Consensus 26 aei~gvdl~~~l~------~----~~~~~l~~~l~~~Gvv~fRg~~~l~~~~~~---~~~~~f 75 (301)
T 1oih_A 26 AEIRGVKLSPDLD------A----ATVEAIQAALVRHKVIFFRGQTHLDDQSQE---GFAKLL 75 (301)
T ss_dssp EEEESCCCCTTCC------H----HHHHHHHHHHHHHSEEEECCCTTCCHHHHH---HHHHTT
T ss_pred eEEeCCCccccCC------H----HHHHHHHHHHHHCCEEEECCCCCCCHHHHH---HHHHHh
Confidence 4566778887432 1 2367899999999999999987 8864443 334444
No 36
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=22.13 E-value=33 Score=30.83 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=26.1
Q ss_pred CCceEEcCCCcCCCCCCChHHHHHHHHHHHHHhhccceEEEEcCCC
Q 018025 59 ELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGI 104 (362)
Q Consensus 59 ~lPvIDls~l~~~~~~~d~~~r~~~~~~i~~A~~~~GFF~v~nHGI 104 (362)
.||++++.... + .++++++.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g------~----~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPG------T----DAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSS------S----HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCC------C----HHHHHHHHHHHccCCEEEEcCCCc
Confidence 57777765432 1 246778888888888888899995
No 37
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=21.62 E-value=88 Score=18.17 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhhccceEE
Q 018025 81 EECKEEIARASQQWGFFQ 98 (362)
Q Consensus 81 ~~~~~~i~~A~~~~GFF~ 98 (362)
.++++.+.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 456778888899999998
No 38
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=21.38 E-value=74 Score=21.41 Aligned_cols=17 Identities=6% Similarity=0.157 Sum_probs=8.3
Q ss_pred ChHHHHHHHHHHHHHhh
Q 018025 76 DESEREECKEEIARASQ 92 (362)
Q Consensus 76 d~~~r~~~~~~i~~A~~ 92 (362)
+++.+++++++|.+++.
T Consensus 15 s~eqK~~l~~~lt~~l~ 31 (67)
T 3m21_A 15 TNEQKQQLIEGVSDLMV 31 (67)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 34555555555554443
Done!