Query 018026
Match_columns 362
No_of_seqs 352 out of 1753
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 08:43:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 1.1E-38 3.9E-43 274.5 7.2 109 194-303 2-112 (138)
2 1jer_A Cucumber stellacyanin; 100.0 1.7E-38 5.8E-43 273.4 6.3 108 21-129 2-111 (138)
3 1ws8_A Mavicyanin; oxidized fo 100.0 9.3E-37 3.2E-41 253.0 7.1 105 195-301 2-106 (109)
4 1x9u_A Umecyanin; cupredoxin, 100.0 2.3E-36 7.9E-41 253.2 7.7 105 196-301 2-107 (116)
5 1x9u_A Umecyanin; cupredoxin, 100.0 5.6E-36 1.9E-40 250.8 6.0 104 23-127 2-106 (116)
6 1ws8_A Mavicyanin; oxidized fo 100.0 4.9E-36 1.7E-40 248.7 5.2 105 22-128 2-106 (109)
7 2cbp_A Cucumber basic protein; 100.0 5.2E-35 1.8E-39 237.4 7.0 96 196-298 1-96 (96)
8 2cbp_A Cucumber basic protein; 100.0 2.3E-34 7.8E-39 233.6 6.5 96 23-125 1-96 (96)
9 1f56_A Plantacyanin; cupredoxi 100.0 1.4E-31 4.9E-36 215.0 8.3 90 197-298 2-91 (91)
10 1f56_A Plantacyanin; cupredoxi 100.0 7.3E-31 2.5E-35 210.9 7.3 91 23-125 1-91 (91)
11 1qhq_A Protein (auracyanin); e 99.2 4.1E-11 1.4E-15 102.2 7.0 96 193-298 14-139 (140)
12 1qhq_A Protein (auracyanin); e 99.1 7.9E-11 2.7E-15 100.4 5.8 95 21-125 15-139 (140)
13 1bxv_A Plastocyanin; copper pr 99.1 1.7E-10 5.8E-15 90.5 6.2 86 196-298 3-91 (91)
14 1bxv_A Plastocyanin; copper pr 99.0 4.3E-10 1.5E-14 88.1 5.9 85 24-125 4-91 (91)
15 2cal_A Rusticyanin; iron respi 98.9 9.2E-10 3.2E-14 95.9 5.4 77 221-298 61-154 (154)
16 2cal_A Rusticyanin; iron respi 98.9 1.9E-09 6.4E-14 94.0 5.9 76 49-125 62-154 (154)
17 1pmy_A Pseudoazurin; electron 98.9 5.6E-09 1.9E-13 87.7 8.6 73 221-300 21-95 (123)
18 1pmy_A Pseudoazurin; electron 98.8 6.2E-09 2.1E-13 87.4 8.1 73 48-127 21-95 (123)
19 1paz_A Pseudoazurin precursor; 98.8 6.1E-09 2.1E-13 87.5 8.0 72 221-299 21-94 (123)
20 1paz_A Pseudoazurin precursor; 98.8 6.6E-09 2.3E-13 87.2 7.3 73 48-127 21-95 (123)
21 3erx_A Pseudoazurin; copper pr 98.8 1.2E-08 4.1E-13 85.7 7.5 72 221-299 21-94 (123)
22 3erx_A Pseudoazurin; copper pr 98.8 9.8E-09 3.3E-13 86.3 6.6 72 48-126 21-94 (123)
23 2gim_A Plastocyanin; beta shee 98.8 1.7E-08 5.9E-13 81.3 7.9 90 196-298 4-105 (106)
24 2aan_A Auracyanin A; cupredoxi 98.8 2.8E-08 9.6E-13 84.4 9.5 95 193-298 16-139 (139)
25 2gim_A Plastocyanin; beta shee 98.7 2.7E-08 9.2E-13 80.1 8.3 90 23-125 4-105 (106)
26 1plc_A Plastocyanin; electron 98.7 2E-08 6.8E-13 80.1 7.4 90 197-298 2-99 (99)
27 1b3i_A PETE protein, protein ( 98.7 3.1E-08 1.1E-12 78.6 8.5 90 196-298 3-97 (97)
28 3tu6_A Pseudoazurin (blue copp 98.7 1.7E-08 5.8E-13 85.3 7.1 74 221-301 23-98 (127)
29 2aan_A Auracyanin A; cupredoxi 98.7 8E-08 2.7E-12 81.6 11.1 94 21-125 17-139 (139)
30 1iuz_A Plastocyanin; electron 98.7 1.2E-08 3.9E-13 81.6 5.4 91 196-298 2-98 (98)
31 3tu6_A Pseudoazurin (blue copp 98.7 2.3E-08 8E-13 84.4 7.4 73 48-127 23-97 (127)
32 3ef4_A Pseudoazurin, blue copp 98.7 2.5E-08 8.5E-13 83.9 7.5 72 48-126 22-95 (124)
33 1plc_A Plastocyanin; electron 98.7 3.2E-08 1.1E-12 78.8 7.6 90 24-125 2-99 (99)
34 1kdj_A Plastocyanin; electron 98.7 3.1E-08 1.1E-12 79.3 6.5 90 197-298 2-102 (102)
35 3ef4_A Pseudoazurin, blue copp 98.7 4.1E-08 1.4E-12 82.6 7.3 72 221-299 22-95 (124)
36 1byp_A Protein (plastocyanin); 98.6 5.3E-08 1.8E-12 77.5 7.1 90 197-298 2-99 (99)
37 1iuz_A Plastocyanin; electron 98.6 2.6E-08 9E-13 79.5 5.0 91 23-125 2-98 (98)
38 1b3i_A PETE protein, protein ( 98.6 8.7E-08 3E-12 76.0 8.0 90 23-125 3-97 (97)
39 1byp_A Protein (plastocyanin); 98.6 1.1E-07 3.8E-12 75.6 7.6 89 24-125 2-99 (99)
40 1kdj_A Plastocyanin; electron 98.6 9.4E-08 3.2E-12 76.4 6.8 90 24-125 2-102 (102)
41 2plt_A Plastocyanin; electron 98.5 1E-07 3.4E-12 75.6 6.1 91 196-298 2-98 (98)
42 1pcs_A Plastocyanin; electron 98.5 1.5E-07 5.2E-12 74.7 7.1 91 196-298 3-98 (98)
43 2plt_A Plastocyanin; electron 98.5 1.8E-07 6.1E-12 74.2 5.8 91 23-125 2-98 (98)
44 1pcs_A Plastocyanin; electron 98.4 3.3E-07 1.1E-11 72.7 6.5 91 23-125 3-98 (98)
45 3ay2_A Lipid modified azurin p 98.2 2.5E-06 8.5E-11 75.2 6.6 95 193-298 40-166 (167)
46 4hci_A Cupredoxin 1; structura 98.1 1E-06 3.5E-11 70.4 2.8 70 221-298 28-100 (100)
47 3cvb_A Plastocyanin; cupredoxi 98.1 6.4E-06 2.2E-10 65.7 6.4 89 196-298 3-104 (105)
48 3cvb_A Plastocyanin; cupredoxi 98.0 1.1E-05 3.8E-10 64.3 7.1 89 23-125 3-104 (105)
49 2ux6_A Pseudoazurin; type-1 co 98.0 8.4E-06 2.9E-10 68.0 6.4 71 221-300 21-93 (122)
50 2ux6_A Pseudoazurin; type-1 co 98.0 1.1E-05 3.6E-10 67.4 6.4 71 48-127 21-93 (122)
51 3c75_A Amicyanin; copper prote 98.0 1.1E-05 3.9E-10 68.0 6.6 67 48-125 60-132 (132)
52 4hci_A Cupredoxin 1; structura 97.9 2.4E-06 8.3E-11 68.2 1.2 67 48-125 28-100 (100)
53 1cuo_A Protein (azurin ISO-2); 97.9 4.2E-05 1.4E-09 64.5 8.8 91 197-298 4-128 (129)
54 1cuo_A Protein (azurin ISO-2); 97.9 9.3E-05 3.2E-09 62.3 10.8 92 23-125 3-128 (129)
55 3ay2_A Lipid modified azurin p 97.9 2.9E-05 1E-09 68.3 7.8 92 23-125 43-166 (167)
56 2ov0_A Amicyanin; beta-sandwic 97.8 3.8E-05 1.3E-09 61.9 6.2 67 221-298 33-105 (105)
57 1id2_A Amicyanin; beta barrel, 97.7 5.7E-05 2E-09 61.0 6.4 67 221-298 34-106 (106)
58 2iaa_C Azurin; quinoprotein, t 97.7 0.00015 5.1E-09 61.0 8.3 91 197-298 3-127 (128)
59 2ov0_A Amicyanin; beta-sandwic 97.7 8.5E-05 2.9E-09 59.8 6.6 67 48-125 33-105 (105)
60 2ccw_A Azurin II, AZN-2; elect 97.6 0.00012 4.2E-09 61.6 7.7 91 197-298 4-128 (129)
61 1nwp_A Azurin; electron transp 97.6 0.00013 4.4E-09 61.4 7.5 91 197-298 4-128 (128)
62 1nwp_A Azurin; electron transp 97.6 0.00022 7.4E-09 60.0 8.5 92 23-125 3-128 (128)
63 1id2_A Amicyanin; beta barrel, 97.6 0.00011 3.8E-09 59.3 6.5 67 48-125 34-106 (106)
64 2ccw_A Azurin II, AZN-2; elect 97.5 0.00019 6.5E-09 60.4 7.4 92 23-125 3-128 (129)
65 2iaa_C Azurin; quinoprotein, t 97.5 0.00035 1.2E-08 58.7 9.0 91 24-125 3-127 (128)
66 3c75_A Amicyanin; copper prote 97.5 0.00014 4.8E-09 61.2 6.3 67 221-298 60-132 (132)
67 1iko_P Ephrin-B2; greek KEY, g 96.8 0.00039 1.3E-08 61.6 2.3 78 51-128 25-142 (178)
68 1iko_P Ephrin-B2; greek KEY, g 96.7 0.0007 2.4E-08 60.0 3.1 79 224-302 25-143 (178)
69 2dv6_A Nitrite reductase; elec 96.7 0.0048 1.6E-07 61.4 9.4 76 48-127 55-133 (447)
70 1iby_A Nitrosocyanin; RED copp 96.6 0.00086 2.9E-08 54.1 2.5 67 48-125 38-111 (112)
71 1iby_A Nitrosocyanin; RED copp 96.6 0.0011 3.9E-08 53.4 3.0 67 221-298 38-111 (112)
72 1oe1_A Dissimilatory copper-co 96.5 0.031 1.1E-06 53.4 13.3 35 268-302 286-321 (336)
73 3gdc_A Multicopper oxidase; be 96.1 0.01 3.6E-07 55.8 7.1 78 221-299 195-288 (288)
74 3d12_B Ephrin-B3; beta propell 95.9 0.0067 2.3E-07 51.8 4.3 76 223-298 22-140 (141)
75 1mzy_A Copper-containing nitri 95.7 0.064 2.2E-06 51.3 11.2 80 48-127 64-153 (333)
76 1shx_A Ephrin-A5; ephrin signa 95.5 0.022 7.4E-07 48.4 6.1 76 223-301 23-135 (138)
77 3fsa_A Azurin; copper, cupredo 95.4 0.16 5.3E-06 42.4 10.8 88 24-125 4-125 (125)
78 2cua_A Protein (CUA); CUA cent 95.3 0.029 9.8E-07 47.3 6.1 67 48-125 60-134 (135)
79 2cua_A Protein (CUA); CUA cent 95.3 0.029 9.9E-07 47.2 6.1 70 221-298 60-134 (135)
80 2x11_B Ephrin-A5; receptor-sig 95.2 0.026 8.8E-07 49.8 5.8 77 223-302 52-165 (177)
81 3czu_B Ephrin-A1; ATP-binding, 95.2 0.022 7.4E-07 50.5 5.1 77 223-302 50-163 (182)
82 3fsa_A Azurin; copper, cupredo 95.1 0.084 2.9E-06 44.0 8.4 74 221-298 18-125 (125)
83 2x11_B Ephrin-A5; receptor-sig 95.0 0.015 5E-07 51.3 3.5 77 49-128 51-164 (177)
84 2vsm_B Ephrin-B2; developmenta 94.4 0.026 8.8E-07 48.1 3.5 76 223-298 23-138 (140)
85 3kw8_A Laccase, putative coppe 94.3 0.33 1.1E-05 45.1 11.2 81 221-302 168-268 (276)
86 3czu_B Ephrin-A1; ATP-binding, 94.2 0.05 1.7E-06 48.1 5.0 76 49-127 49-161 (182)
87 3tas_A Small laccase, multi-co 93.6 2.1 7.1E-05 40.4 15.6 31 273-303 245-275 (313)
88 1shx_A Ephrin-A5; ephrin signa 93.6 0.053 1.8E-06 46.0 3.8 76 49-127 22-134 (138)
89 3d12_B Ephrin-B3; beta propell 93.6 0.039 1.3E-06 47.0 3.0 76 50-125 22-140 (141)
90 2dv6_A Nitrite reductase; elec 92.7 0.068 2.3E-06 53.0 3.8 77 221-301 55-134 (447)
91 1sdd_A Coagulation factor V; c 92.5 0.2 6.9E-06 47.3 6.7 79 222-300 216-301 (306)
92 2wo3_B Ephrin-A2; transferase- 92.4 0.22 7.6E-06 43.0 6.1 35 223-257 32-77 (157)
93 3cg8_A Laccase; oxidoreductase 91.6 0.36 1.2E-05 46.5 7.3 81 221-302 209-309 (343)
94 1fwx_A Nitrous oxide reductase 91.5 0.15 5.2E-06 52.9 4.9 71 48-126 513-592 (595)
95 1fwx_A Nitrous oxide reductase 91.5 0.14 4.6E-06 53.3 4.4 72 221-300 513-593 (595)
96 3t9w_A Small laccase, multi-co 91.4 2.5 8.6E-05 39.7 12.9 32 272-303 260-291 (299)
97 3s8f_B Cytochrome C oxidase su 91.4 0.41 1.4E-05 41.7 6.8 69 48-125 93-167 (168)
98 2vsm_B Ephrin-B2; developmenta 91.3 0.18 6.2E-06 42.8 4.3 77 50-126 23-139 (140)
99 2wo3_B Ephrin-A2; transferase- 90.9 0.17 5.7E-06 43.8 3.6 36 49-84 31-77 (157)
100 3sbq_A Nitrous-oxide reductase 90.5 0.19 6.4E-06 52.1 4.3 71 221-299 558-637 (638)
101 3sbq_A Nitrous-oxide reductase 89.8 0.28 9.7E-06 50.8 4.9 68 48-126 558-637 (638)
102 3s8f_B Cytochrome C oxidase su 89.6 0.53 1.8E-05 41.0 5.9 71 221-298 93-167 (168)
103 3g5w_A Multicopper oxidase typ 89.6 0.59 2E-05 44.4 6.8 34 268-301 239-278 (318)
104 3hei_B Ephrin-A1; EPH receptor 86.1 0.91 3.1E-05 38.1 4.9 35 223-257 22-67 (132)
105 2r7e_B Coagulation factor VIII 84.5 0.73 2.5E-05 49.3 4.6 76 222-298 369-455 (770)
106 3hei_B Ephrin-A1; EPH receptor 83.1 0.9 3.1E-05 38.1 3.6 36 49-84 21-67 (132)
107 1kbv_A ANIA, major outer membr 79.5 1.1 3.9E-05 42.5 3.4 34 268-301 275-309 (327)
108 1mzy_A Copper-containing nitri 78.9 1.2 4.2E-05 42.2 3.4 77 222-301 65-154 (333)
109 1oe1_A Dissimilatory copper-co 77.8 1.4 4.7E-05 41.8 3.4 77 222-301 66-154 (336)
110 1kbv_A ANIA, major outer membr 75.9 1.3 4.3E-05 42.2 2.6 78 221-301 70-158 (327)
111 2zoo_A Probable nitrite reduct 75.6 1.2 4.1E-05 43.9 2.4 35 268-302 265-300 (442)
112 2bw4_A Copper-containing nitri 74.1 2.1 7.2E-05 40.6 3.6 79 49-127 72-159 (340)
113 2zoo_A Probable nitrite reduct 72.0 1.4 4.7E-05 43.5 1.8 81 221-301 60-148 (442)
114 2bw4_A Copper-containing nitri 65.7 3.6 0.00012 39.0 3.2 77 222-301 72-160 (340)
115 1aoz_A Ascorbate oxidase; oxid 65.1 6.7 0.00023 39.9 5.3 80 48-127 34-124 (552)
116 1zpu_A Iron transport multicop 62.8 6.8 0.00023 39.8 4.8 79 49-127 35-125 (534)
117 1yel_A AT1G16640; CESG, protei 61.2 3.2 0.00011 32.6 1.6 28 220-247 73-101 (104)
118 2q9o_A Laccase-1; multicopper 60.9 5.2 0.00018 40.9 3.6 79 49-127 68-158 (559)
119 3ghp_A Cellulosomal scaffoldin 60.5 5.9 0.0002 35.5 3.3 8 51-58 20-27 (227)
120 1v10_A Laccase; multicopper bl 58.5 5.3 0.00018 40.4 3.1 34 94-127 116-150 (521)
121 3sqr_A Laccase; multicopper ox 58.4 8.6 0.00029 39.6 4.7 34 94-127 155-188 (580)
122 3iuw_A Activating signal coint 56.7 5.2 0.00018 30.7 2.0 16 223-238 36-52 (83)
123 2zwn_A Two-domain type laccase 56.2 7.6 0.00026 36.9 3.6 79 48-126 35-126 (339)
124 3t6v_A Laccase; beta barrel, o 55.4 9.6 0.00033 38.3 4.4 79 49-127 36-130 (495)
125 3pxl_A Laccase; 4-copper prote 55.1 10 0.00034 38.3 4.5 79 49-127 35-129 (499)
126 4i1k_A B3 domain-containing tr 52.8 5.7 0.0002 33.5 1.9 26 220-245 112-137 (146)
127 1zpu_A Iron transport multicop 48.3 15 0.00052 37.1 4.6 81 221-301 34-126 (534)
128 2uxt_A Protein SUFI, SUFI; oxi 48.1 6.2 0.00021 39.1 1.6 74 49-127 51-139 (451)
129 2q9o_A Laccase-1; multicopper 47.8 10 0.00035 38.6 3.2 79 222-300 68-158 (559)
130 1aoz_A Ascorbate oxidase; oxid 46.7 16 0.00056 37.0 4.5 81 221-301 34-125 (552)
131 2zwn_A Two-domain type laccase 46.3 12 0.0004 35.6 3.1 81 221-301 35-128 (339)
132 1yel_A AT1G16640; CESG, protei 45.7 5.9 0.0002 31.0 0.8 23 48-72 74-96 (104)
133 4i1k_A B3 domain-containing tr 45.3 6.8 0.00023 33.0 1.1 25 48-72 113-137 (146)
134 1sdd_A Coagulation factor V; c 42.7 4.7 0.00016 37.8 -0.3 78 49-127 216-301 (306)
135 3kw8_A Laccase, putative coppe 42.6 19 0.00066 32.9 3.9 29 100-128 239-267 (276)
136 3sqr_A Laccase; multicopper ox 41.9 20 0.0007 36.8 4.3 79 222-300 99-188 (580)
137 3t6v_A Laccase; beta barrel, o 40.7 22 0.00075 35.7 4.3 79 222-300 36-130 (495)
138 3l6w_A Hemocyanin 1; cupredoxi 39.6 20 0.00069 36.1 3.8 74 49-125 412-491 (491)
139 3pxl_A Laccase; 4-copper prote 39.0 24 0.00081 35.5 4.2 79 222-300 35-129 (499)
140 1cyx_A CYOA; electron transpor 38.3 26 0.00089 31.3 3.9 68 222-298 42-115 (205)
141 1hfu_A Laccase 1; oxidoreducta 35.9 39 0.0013 33.8 5.2 80 48-127 34-129 (503)
142 3ghp_A Cellulosomal scaffoldin 35.6 21 0.0007 32.0 2.7 23 54-79 40-66 (227)
143 4dny_A Metalloprotease STCE; m 35.4 15 0.0005 30.4 1.6 37 194-236 77-113 (126)
144 3cg8_A Laccase; oxidoreductase 34.2 32 0.0011 32.7 4.1 31 99-129 279-309 (343)
145 3hb3_B Cytochrome C oxidase su 32.0 34 0.0012 32.2 3.8 71 221-300 189-265 (298)
146 3gdc_A Multicopper oxidase; be 31.7 13 0.00043 34.5 0.7 32 95-126 257-288 (288)
147 2gsm_B Cytochrome C oxidase su 31.3 37 0.0013 31.3 3.8 70 221-299 171-246 (262)
148 1v54_B Cytochrome C oxidase po 30.6 34 0.0012 30.8 3.4 69 222-299 141-215 (227)
149 2xu9_A Laccase; oxidoreductase 30.0 27 0.00093 34.1 2.9 75 49-127 48-136 (439)
150 2uxt_A Protein SUFI, SUFI; oxi 29.6 19 0.00066 35.5 1.7 79 222-301 51-140 (451)
151 2qcp_X Cation efflux system pr 27.8 26 0.0009 26.3 1.8 17 222-238 51-67 (80)
152 2vb2_X Copper protein, cation 27.1 27 0.00094 26.7 1.8 19 220-238 57-75 (88)
153 1v10_A Laccase; multicopper bl 27.0 40 0.0014 33.8 3.6 79 222-300 56-150 (521)
154 1cyx_A CYOA; electron transpor 26.4 38 0.0013 30.2 2.9 88 23-125 18-115 (205)
155 2j5w_A Ceruloplasmin, ferroxid 26.4 22 0.00076 39.2 1.6 75 49-127 633-718 (1065)
156 3abg_A Bilirubin oxidase; clea 26.3 79 0.0027 31.9 5.6 104 195-301 349-477 (534)
157 2hzs_I RNA polymerase II media 25.7 1.2 4.2E-05 26.1 -4.6 19 49-67 4-22 (27)
158 1wid_A DNA-binding protein RAV 25.4 23 0.00078 28.9 1.2 18 220-237 87-104 (130)
159 2l55_A SILB,silver efflux prot 25.0 30 0.001 26.1 1.7 17 222-238 45-61 (82)
160 3aw5_A Multicopper oxidase; be 24.8 15 0.00052 36.2 -0.0 75 49-127 39-127 (448)
161 2z0t_A Putative uncharacterize 24.6 34 0.0012 27.4 2.0 12 222-233 31-42 (109)
162 1xne_A Hypothetical protein PF 23.5 21 0.00073 28.8 0.6 12 50-61 33-44 (113)
163 3zx1_A Oxidoreductase, putativ 23.3 43 0.0015 33.4 3.0 79 49-128 83-173 (481)
164 3hb3_B Cytochrome C oxidase su 23.2 49 0.0017 31.1 3.1 32 94-127 231-265 (298)
165 1hfu_A Laccase 1; oxidoreducta 22.1 50 0.0017 32.9 3.2 80 221-300 34-129 (503)
166 2h8h_A Proto-oncogene tyrosine 21.9 46 0.0016 33.1 2.9 15 221-235 100-114 (535)
167 2k75_A Uncharacterized protein 21.6 47 0.0016 26.0 2.3 29 197-234 41-69 (106)
168 2gsm_B Cytochrome C oxidase su 21.5 57 0.002 30.0 3.2 31 94-126 213-246 (262)
169 2r7e_B Coagulation factor VIII 20.5 40 0.0014 35.8 2.1 29 273-301 269-299 (770)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.1e-38 Score=274.49 Aligned_cols=109 Identities=40% Similarity=0.777 Sum_probs=101.1
Q ss_pred CceeeeeeccCCcccCCCCCCCccccccCCceecCCEEEEEeCCCCceEEEE-cccccCCCCCCCCCccCCCCCceEEc-
Q 018026 194 QPATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEV-TKAAYDSCNSSSTISKSTNPPTRITL- 271 (362)
Q Consensus 194 ~~~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~hsV~~v-~~~~y~~C~~~~~~~~~~~G~~~v~l- 271 (362)
.+++|+|||+.||+++++ ..+|++|+++++|+|||+|+|+|++++|+|+|| ++++|+.|+..+++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~GW~~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGCSSCCSS-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCcCcCCCC-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEec
Confidence 467899999999999753 468999999999999999999999999999999 99999999999999999999999999
Q ss_pred CCcccEEEEcCCCCCCCCCCeEEEEeeCCCCC
Q 018026 272 GTAGEHYFFCTFPGHCSAGQKLAVNVTGGSST 303 (362)
Q Consensus 272 ~~~G~~yFic~~~~HC~~GmKl~I~V~~~~~~ 303 (362)
+++|++||||++++||++||||+|+|.+..+.
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~ 112 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANAT 112 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC--
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCCC
Confidence 99999999999999999999999999876643
No 2
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.7e-38 Score=273.42 Aligned_cols=108 Identities=44% Similarity=0.824 Sum_probs=100.7
Q ss_pred cceEEEecCCCCCcCCCCCCCCCCccccCceeeeCCEEEEeecCCCccEEEe-CccccCCCCCCCCCCcCCCCCcEEEE-
Q 018026 21 AQTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRV-TQSSFNACNTTSPLSRTTNSPASVTL- 98 (362)
Q Consensus 21 a~~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~~h~V~~V-~~~~y~~C~~~~~i~~~~~G~~~v~l- 98 (362)
++++|+|||+.||+++++ ..+|+.||++++|+|||+|+|+|.+++|+|+|| ++++|+.|+..+++..+++|.++|+|
T Consensus 2 ~a~~~~VGg~~GW~~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGCSSCCSS-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCcCcCCCC-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEec
Confidence 358999999999999753 578999999999999999999999999999999 99999999999999999999999999
Q ss_pred eeccceEEEcCCCCCCCCCCeeeEEeecCCC
Q 018026 99 TASGPHYFICSFPGHCLGGQKLAINVSARGS 129 (362)
Q Consensus 99 ~~~G~~yFic~~~~HC~~Gmk~~I~V~~~~~ 129 (362)
+++|++||||++++||++||||+|+|.....
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 9999999999999999999999999987643
No 3
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=9.3e-37 Score=253.01 Aligned_cols=105 Identities=41% Similarity=0.823 Sum_probs=98.1
Q ss_pred ceeeeeeccCCcccCCCCCCCccccccCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCCCccCCCCCceEEcCCc
Q 018026 195 PATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTA 274 (362)
Q Consensus 195 ~~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~ 274 (362)
+++|+|||+.||++++ ..+|++|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|+++|+|+++
T Consensus 2 a~~~~VG~~~GW~~~~--~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCEEETTGGGCSCSSS--CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSS
T ss_pred CcEEEeCCCCCccCCC--CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCC
Confidence 5689999999999863 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCCCCCeEEEEeeCCC
Q 018026 275 GEHYFFCTFPGHCSAGQKLAVNVTGGS 301 (362)
Q Consensus 275 G~~yFic~~~~HC~~GmKl~I~V~~~~ 301 (362)
|++||||++++||++||||+|+|.+..
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~~ 106 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPGS 106 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC--
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCCC
Confidence 999999999999999999999997654
No 4
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=2.3e-36 Score=253.18 Aligned_cols=105 Identities=43% Similarity=0.815 Sum_probs=97.1
Q ss_pred eeeeeeccCCcccCCCCCCCccccccCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcc
Q 018026 196 ATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAG 275 (362)
Q Consensus 196 ~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 275 (362)
++|+|||+.||+++. ...+|+.|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|+++|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~~-~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPS-DPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCCS-STTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCcCcCCC-CCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCC
Confidence 479999999999873 3568999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCeEEE-EeeCCC
Q 018026 276 EHYFFCTFPGHCSAGQKLAV-NVTGGS 301 (362)
Q Consensus 276 ~~yFic~~~~HC~~GmKl~I-~V~~~~ 301 (362)
++||||++++||++||||+| +|.+..
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred CEEEECCCCCccccCCEEEEEEECCCC
Confidence 99999999999999999999 776544
No 5
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=5.6e-36 Score=250.85 Aligned_cols=104 Identities=43% Similarity=0.846 Sum_probs=97.1
Q ss_pred eEEEecCCCCCcCCCCCCCCCCccccCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeecc
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASG 102 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~G 102 (362)
++|+|||+.||+++ ....+|+.|+++++|+|||+|+|+|.+++|+|+||++++|+.|+..+++..+++|.++|+|+++|
T Consensus 2 ~~~~VG~~~GW~~~-~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDMEWKRP-SDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGCSSCC-SSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCcCcCC-CCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCC
Confidence 57999999999986 34578999999999999999999999999999999999999999999998899999999999999
Q ss_pred ceEEEcCCCCCCCCCCeeeE-EeecC
Q 018026 103 PHYFICSFPGHCLGGQKLAI-NVSAR 127 (362)
Q Consensus 103 ~~yFic~~~~HC~~Gmk~~I-~V~~~ 127 (362)
++||||++++||++||||+| +|...
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred CEEEECCCCCccccCCEEEEEEECCC
Confidence 99999999999999999999 77644
No 6
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=4.9e-36 Score=248.68 Aligned_cols=105 Identities=41% Similarity=0.829 Sum_probs=98.0
Q ss_pred ceEEEecCCCCCcCCCCCCCCCCccccCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeec
Q 018026 22 QTRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTAS 101 (362)
Q Consensus 22 ~~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~ 101 (362)
+++|+|||+.||++++ ..+|+.||++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|+++|+|+++
T Consensus 2 a~~~~VG~~~GW~~~~--~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCEEETTGGGCSCSSS--CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSS
T ss_pred CcEEEeCCCCCccCCC--CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCC
Confidence 3789999999999863 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCCCCCCCCCeeeEEeecCC
Q 018026 102 GPHYFICSFPGHCLGGQKLAINVSARG 128 (362)
Q Consensus 102 G~~yFic~~~~HC~~Gmk~~I~V~~~~ 128 (362)
|++||||++++||++||||+|+|.+..
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~~ 106 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPGS 106 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC--
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCCC
Confidence 999999999999999999999998653
No 7
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=5.2e-35 Score=237.35 Aligned_cols=96 Identities=41% Similarity=0.873 Sum_probs=91.9
Q ss_pred eeeeeeccCCcccCCCCCCCccccccCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcc
Q 018026 196 ATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAG 275 (362)
Q Consensus 196 ~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 275 (362)
++|+|||+.||++ +|+.|+++++|+|||+|+|+|.+++|+|+||++++|++|+..+++..+++|++.|+| ++|
T Consensus 1 ~~~~VG~~~GW~~------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g 73 (96)
T 2cbp_A 1 AVYVVGGSGGWTF------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKG 73 (96)
T ss_dssp CEEETTGGGCSCS------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSE
T ss_pred CEEEECCcCCCcc------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCC
Confidence 3799999999986 499999999999999999999999999999999999999999999999999999999 899
Q ss_pred cEEEEcCCCCCCCCCCeEEEEee
Q 018026 276 EHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 276 ~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
++||||++++||++||||+|+|+
T Consensus 74 ~~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 74 QSYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEEEECCSTTTGGGTCEEEEEEC
T ss_pred CEEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999985
No 8
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=2.3e-34 Score=233.55 Aligned_cols=96 Identities=38% Similarity=0.771 Sum_probs=91.7
Q ss_pred eEEEecCCCCCcCCCCCCCCCCccccCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeecc
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASG 102 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~G 102 (362)
++|+|||+.||++ +|+.||++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|++.|+| ++|
T Consensus 1 ~~~~VG~~~GW~~------~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g 73 (96)
T 2cbp_A 1 AVYVVGGSGGWTF------NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKG 73 (96)
T ss_dssp CEEETTGGGCSCS------SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSE
T ss_pred CEEEECCcCCCcc------ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCC
Confidence 3799999999996 399999999999999999999999999999999999999999999889999999999 899
Q ss_pred ceEEEcCCCCCCCCCCeeeEEee
Q 018026 103 PHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 103 ~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
++||||++++||++||||+|+|+
T Consensus 74 ~~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 74 QSYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEEEECCSTTTGGGTCEEEEEEC
T ss_pred CEEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999985
No 9
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.97 E-value=1.4e-31 Score=215.03 Aligned_cols=90 Identities=39% Similarity=0.793 Sum_probs=85.3
Q ss_pred eeeeeccCCcccCCCCCCCccccccCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCCCccCCCCCceEEcCCccc
Q 018026 197 THVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGE 276 (362)
Q Consensus 197 ~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~ 276 (362)
+|+| ||+++ +.|+++++|+|||+|+|+|.+++|+|+||++++|++|+..+++..+++|++.|+|+ +|+
T Consensus 2 ~y~V----gW~~~-------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~ 69 (91)
T 1f56_A 2 VYNI----GWSFN-------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQ 69 (91)
T ss_dssp EEEE----ECSSS-------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEE
T ss_pred EEEE----eCCCC-------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCC
Confidence 6888 89863 89999999999999999999999999999999999999999999999999999996 899
Q ss_pred EEEEcCCCCCCCCCCeEEEEee
Q 018026 277 HYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 277 ~yFic~~~~HC~~GmKl~I~V~ 298 (362)
+||||++++||++||||+|+|.
T Consensus 70 ~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 70 NYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEEECCSTTTTTTTCEEEEEEC
T ss_pred eEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999984
No 10
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.96 E-value=7.3e-31 Score=210.89 Aligned_cols=91 Identities=37% Similarity=0.756 Sum_probs=85.5
Q ss_pred eEEEecCCCCCcCCCCCCCCCCccccCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeecc
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASG 102 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~G 102 (362)
++|+| ||+++ +.|+++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|++.|+|+ +|
T Consensus 1 ~~y~V----gW~~~-------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g 68 (91)
T 1f56_A 1 AVYNI----GWSFN-------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RG 68 (91)
T ss_dssp CEEEE----ECSSS-------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SE
T ss_pred CEEEE----eCCCC-------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CC
Confidence 36888 79973 89999999999999999999999999999999999999999998899999999996 89
Q ss_pred ceEEEcCCCCCCCCCCeeeEEee
Q 018026 103 PHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 103 ~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
++||||++++||++||||+|+|.
T Consensus 69 ~~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 69 QNYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEC
T ss_pred CeEEEcCCCCccccCCEEEEEEC
Confidence 99999999999999999999984
No 11
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.16 E-value=4.1e-11 Score=102.17 Aligned_cols=96 Identities=20% Similarity=0.318 Sum_probs=66.2
Q ss_pred CCceeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-----CCceEEEEccc-ccCCC------------
Q 018026 193 RQPATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-----RVHDVVEVTKA-AYDSC------------ 253 (362)
Q Consensus 193 a~~~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-----~~hsV~~v~~~-~y~~C------------ 253 (362)
+...++.|+-. .+|.+.+ +..+++.||+|+|.|.+ ..|+++..... ++..+
T Consensus 14 ~~~~~v~V~~~~~~~~F~P----------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQ----------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADAL 83 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSC----------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGT
T ss_pred CCCEEEEEEEeCCCceEeC----------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhccccc
Confidence 34567888754 3576532 66899999999999865 57999887422 22110
Q ss_pred -----CCC------CCCccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 254 -----NSS------STISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 254 -----~~~------~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
+.. ..+....++..+|+++++|.|||+|++.+||+.|||+.|+|.
T Consensus 84 ~~~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 84 FVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TCCCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ccCccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 000 111222333456888999999999999999999999999996
No 12
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.09 E-value=7.9e-11 Score=100.39 Aligned_cols=95 Identities=21% Similarity=0.353 Sum_probs=64.9
Q ss_pred cceEEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-----CCccEEEeCcc-ccCCC-------------
Q 018026 21 AQTRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-----GNHDVTRVTQS-SFNAC------------- 80 (362)
Q Consensus 21 a~~~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-----~~h~V~~V~~~-~y~~C------------- 80 (362)
+.+++.|+-. .+|.+.+ ..++++.||+|+|.|.+ ..|+++..... ++..+
T Consensus 15 ~~~~v~V~~~~~~~~F~P----------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (140)
T 1qhq_A 15 PAQTVEVRAAPDALAFAQ----------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALF 84 (140)
T ss_dssp CSEEEEEEBCSSSSSBSC----------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTT
T ss_pred CCEEEEEEEeCCCceEeC----------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccc
Confidence 3456777653 3577754 67899999999999876 57999876322 22110
Q ss_pred ----CCC------CCCCcCCCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 81 ----NTT------SPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 81 ----~~~------~~i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+.. ..+....++..+|+++++|.|||+|++.+||+.|||+.|+|.
T Consensus 85 ~~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 85 VPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cCccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 000 011112223345777889999999999999999999999996
No 13
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.06 E-value=1.7e-10 Score=90.45 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=61.5
Q ss_pred eeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-CCceEEEEcccccCCCCCCCCCccCCCC-CceEEcC
Q 018026 196 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYDSCNSSSTISKSTNP-PTRITLG 272 (362)
Q Consensus 196 ~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~hsV~~v~~~~y~~C~~~~~~~~~~~G-~~~v~l~ 272 (362)
.++.||++ .+|.+ +. +.+++++||+|+|.+.. ..|+|+......+. . . ......| ..+++++
T Consensus 3 ~~v~~~~~~~~~~f--------~P--~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-~---~-~~~~~~g~~~~~~f~ 67 (91)
T 1bxv_A 3 VAIKMGADNGMLAF--------EP--STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-H---K-DLAFSPGETFEATFS 67 (91)
T ss_dssp EEEEESCTTSCSSE--------ES--SEEEECTTCEEEEEECSSCCEEEEETTCGGGC-E---E-EEECSTTCEEEEECC
T ss_pred EEEEEecCCCccEE--------eC--CEEEECCCCEEEEEECCCCCcEEEEeCCCccC-c---c-cceeCCCCEEEEEeC
Confidence 35677764 45654 33 66899999999999864 68999865533321 0 0 1122333 4678899
Q ss_pred CcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 273 TAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 273 ~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
++|.|+|+|. .||+.||+..|.|.
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999984
No 14
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.99 E-value=4.3e-10 Score=88.10 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=60.6
Q ss_pred EEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-CCccEEEeCccccCCCCCCCCCCcCCCC-CcEEEEee
Q 018026 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFNACNTTSPLSRTTNS-PASVTLTA 100 (362)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-~~h~V~~V~~~~y~~C~~~~~i~~~~~G-~~~v~l~~ 100 (362)
++.||++ .+|.+.+ +.+++++||+|+|.+.. ..|+|.......+. .+ . .....| ...+++++
T Consensus 4 ~v~~~~~~~~~~f~P----------~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-~~---~-~~~~~g~~~~~~f~~ 68 (91)
T 1bxv_A 4 AIKMGADNGMLAFEP----------STIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-HK---D-LAFSPGETFEATFSE 68 (91)
T ss_dssp EEEESCTTSCSSEES----------SEEEECTTCEEEEEECSSCCEEEEETTCGGGC-EE---E-EECSTTCEEEEECCS
T ss_pred EEEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCcEEEEeCCCccC-cc---c-ceeCCCCEEEEEeCC
Confidence 4567754 4566644 67899999999999874 68999865432221 00 0 112223 46788899
Q ss_pred ccceEEEcCCCCCCCCCCeeeEEee
Q 018026 101 SGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 101 ~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+|.|+|+|. .||..||+..|.|.
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 79999999999983
No 15
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.91 E-value=9.2e-10 Score=95.91 Aligned_cols=77 Identities=18% Similarity=0.237 Sum_probs=58.4
Q ss_pred cCCceecCCEEEEEeCCC----CceEEEEc-ccccCCCCCCCCCc-------cCCCC---Cc--eEEcCCcccEEEEcCC
Q 018026 221 RNNNFSVGDILVFDYPAR----VHDVVEVT-KAAYDSCNSSSTIS-------KSTNP---PT--RITLGTAGEHYFFCTF 283 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~----~hsV~~v~-~~~y~~C~~~~~~~-------~~~~G---~~--~v~l~~~G~~yFic~~ 283 (362)
...++++||+|+|++.+. .|++..++ ...|+.|.....+. ....| .. +|++ ++|.|||+|..
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~ 139 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQI 139 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCS
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCC
Confidence 347899999999999543 59999884 45787886544321 11222 23 5678 99999999999
Q ss_pred CCCCCCCCeEEEEee
Q 018026 284 PGHCSAGQKLAVNVT 298 (362)
Q Consensus 284 ~~HC~~GmKl~I~V~ 298 (362)
++||+.||+..|.|.
T Consensus 140 ~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 140 PGMAATGMFGKIVVK 154 (154)
T ss_dssp TTTGGGTCEEEEEEC
T ss_pred CCHHHCCCEEEEEEC
Confidence 999999999999984
No 16
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.87 E-value=1.9e-09 Score=93.97 Aligned_cols=76 Identities=17% Similarity=0.307 Sum_probs=57.5
Q ss_pred CceeeeCCEEEEeecCC----CccEEEeC-ccccCCCCCCCCC----------CcCCCCCc--EEEEeeccceEEEcCCC
Q 018026 49 NQTFTVGDTLVFNFAAG----NHDVTRVT-QSSFNACNTTSPL----------SRTTNSPA--SVTLTASGPHYFICSFP 111 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~----~h~V~~V~-~~~y~~C~~~~~i----------~~~~~G~~--~v~l~~~G~~yFic~~~ 111 (362)
..++++||+|+|++.+. .|++..++ ...|+.|.....+ .-..+|.. +|++ ++|.|||+|+..
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 57899999999999753 59999884 4577778654332 11121123 5677 999999999999
Q ss_pred CCCCCCCeeeEEee
Q 018026 112 GHCLGGQKLAINVS 125 (362)
Q Consensus 112 ~HC~~Gmk~~I~V~ 125 (362)
+||+.||+..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999883
No 17
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.87 E-value=5.6e-09 Score=87.67 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=54.1
Q ss_pred cCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCC--CCccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 221 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSS--TISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~--~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
...++++||+|.|.+....|+|+... .|.... ..........+++++++|.|+|+|. .||+.||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEc
Confidence 67899999999999987789997642 122111 1111112246789999999999998 49999999999997
Q ss_pred CC
Q 018026 299 GG 300 (362)
Q Consensus 299 ~~ 300 (362)
..
T Consensus 94 ~~ 95 (123)
T 1pmy_A 94 DK 95 (123)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 18
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.85 E-value=6.2e-09 Score=87.42 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=54.0
Q ss_pred cCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCC-CCcC-CCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP-LSRT-TNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~-i~~~-~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+..++++||+|+|.+....|+|+... .|...+. .... ......++++++|.|+|+|. .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 21 ALVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEc
Confidence 67899999999999987799997641 2222111 1111 12236789999999999998 49999999999997
Q ss_pred cC
Q 018026 126 AR 127 (362)
Q Consensus 126 ~~ 127 (362)
..
T Consensus 94 ~~ 95 (123)
T 1pmy_A 94 DK 95 (123)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 19
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.84 E-value=6.1e-09 Score=87.45 Aligned_cols=72 Identities=18% Similarity=0.210 Sum_probs=53.5
Q ss_pred cCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCC--CCccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 221 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSS--TISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~--~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
...++++||+|.|.+....|+|+... .|.... ..........+++++++|.|+|+|. .||++||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEEc
Confidence 67899999999999987789997531 222111 1111112246789999999999998 59999999999997
Q ss_pred C
Q 018026 299 G 299 (362)
Q Consensus 299 ~ 299 (362)
.
T Consensus 94 ~ 94 (123)
T 1paz_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 5
No 20
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.82 E-value=6.6e-09 Score=87.24 Aligned_cols=73 Identities=22% Similarity=0.252 Sum_probs=53.8
Q ss_pred cCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCC--CCCcCCCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTS--PLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~--~i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+..++++||+|+|.+....|+|+.. +.|...+ ...........++++++|.|+|+|. .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~-----~~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVDKGHNVESI-----KDMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp SEEEECTTCEEEEEESSSSCCCEEC-----TTCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCeEEEEe-----cccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEEc
Confidence 6789999999999998778999753 1222211 1111112236789999999999998 59999999999997
Q ss_pred cC
Q 018026 126 AR 127 (362)
Q Consensus 126 ~~ 127 (362)
..
T Consensus 94 ~~ 95 (123)
T 1paz_A 94 DS 95 (123)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 21
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.77 E-value=1.2e-08 Score=85.74 Aligned_cols=72 Identities=19% Similarity=0.206 Sum_probs=54.6
Q ss_pred cCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCC--CccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 221 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSST--ISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
+..++++||+|.|.+....|+|...+. |..... .........+++++++|.|+|+|. .||..||+..|+|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 778999999999999877899965321 222111 111123356789999999999999 79999999999997
Q ss_pred C
Q 018026 299 G 299 (362)
Q Consensus 299 ~ 299 (362)
.
T Consensus 94 ~ 94 (123)
T 3erx_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 5
No 22
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.76 E-value=9.8e-09 Score=86.26 Aligned_cols=72 Identities=19% Similarity=0.193 Sum_probs=54.5
Q ss_pred cCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCC--CCcCCCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~--i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+..++++||+|.|.+....|+|+.... |...+. ..........++++++|.|+|+|. .||..||+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 788999999999999887899975321 222111 111122347899999999999999 79999999999998
Q ss_pred c
Q 018026 126 A 126 (362)
Q Consensus 126 ~ 126 (362)
+
T Consensus 94 ~ 94 (123)
T 3erx_A 94 D 94 (123)
T ss_dssp S
T ss_pred C
Confidence 5
No 23
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.76 E-value=1.7e-08 Score=81.26 Aligned_cols=90 Identities=22% Similarity=0.236 Sum_probs=59.8
Q ss_pred eeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-CCceEEEEcccccC-----C--CCCCCCCccCCCCC
Q 018026 196 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYD-----S--CNSSSTISKSTNPP 266 (362)
Q Consensus 196 ~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~hsV~~v~~~~y~-----~--C~~~~~~~~~~~G~ 266 (362)
.++.||.+ .++. |+. ...++++||+|.|.+.. ..|+|+..+....+ . +.. +.........
T Consensus 4 ~~V~~~~~~~~~~--------F~P--~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~-~~~~~~pG~~ 72 (106)
T 2gim_A 4 YTVKLGSDKGLLV--------FEP--AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSH-KQLLMSPGQS 72 (106)
T ss_dssp EEEEESCTTCCSS--------EES--SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCB-CSCCCSTTCE
T ss_pred EEEEEEecCCcce--------EcC--CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccc-cceeeCCCCE
Confidence 46777653 4565 443 66899999999998754 57999754321100 0 000 1111122234
Q ss_pred ceEEc---CCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 267 TRITL---GTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 267 ~~v~l---~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
.++++ +++|.|+|+|. .||++||+..|+|.
T Consensus 73 ~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 73 TSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 57888 89999999999 89999999999995
No 24
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.76 E-value=2.8e-08 Score=84.41 Aligned_cols=95 Identities=20% Similarity=0.336 Sum_probs=64.5
Q ss_pred CCceeeeeec-cCCcccCCCCCCCccccccCCceecCCEEEEEeCCC----CceEEEEccc------------------c
Q 018026 193 RQPATHVVGG-ALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPAR----VHDVVEVTKA------------------A 249 (362)
Q Consensus 193 a~~~~~~VG~-~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~----~hsV~~v~~~------------------~ 249 (362)
++..++.||. ..++. |+. +.+++++||+|.|.|.+. .|+++..... +
T Consensus 16 ~~~~~V~v~~~~~~~~--------F~p--~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~ 85 (139)
T 2aan_A 16 SGPVTIEIGSKGEELA--------FDK--TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAAN 85 (139)
T ss_dssp -CCEEEEEEBCTTSSS--------BSC--SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGT
T ss_pred CcCEEEEEEecCCccE--------EcC--CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhccccccc
Confidence 3455777853 23555 443 668899999999988543 6999887532 5
Q ss_pred cCCCCCCCCC---ccCCCCC-c--eEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 250 YDSCNSSSTI---SKSTNPP-T--RITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 250 y~~C~~~~~~---~~~~~G~-~--~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
|..|...+.+ .....|. . +|+++++|.|+|+|.+.+||+ ||+..|.|.
T Consensus 86 ~~p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 86 YLPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp TCCSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred ccCcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 6666533211 1233332 2 345568999999999999999 999999984
No 25
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.74 E-value=2.7e-08 Score=80.11 Aligned_cols=90 Identities=23% Similarity=0.220 Sum_probs=60.1
Q ss_pred eEEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-CCccEEEeCccccC-----C--CCCCCCCCcCCCCC
Q 018026 23 TRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFN-----A--CNTTSPLSRTTNSP 93 (362)
Q Consensus 23 ~~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-~~h~V~~V~~~~y~-----~--C~~~~~i~~~~~G~ 93 (362)
.++.||.+ .++.+.+ ...++++||+|+|.+.. ..|+|........+ . +.. ..........
T Consensus 4 ~~V~~~~~~~~~~F~P----------~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~-~~~~~~pG~~ 72 (106)
T 2gim_A 4 YTVKLGSDKGLLVFEP----------AKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSH-KQLLMSPGQS 72 (106)
T ss_dssp EEEEESCTTCCSSEES----------SEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCB-CSCCCSTTCE
T ss_pred EEEEEEecCCcceEcC----------CEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccc-cceeeCCCCE
Confidence 45667653 4676644 67899999999998764 47999753221100 0 000 1111112233
Q ss_pred cEEEE---eeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 94 ASVTL---TASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 94 ~~v~l---~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
..+++ +++|.|+|+|. .||+.||+..|.|.
T Consensus 73 ~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 73 TSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 67888 88999999999 89999999999995
No 26
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.74 E-value=2e-08 Score=80.09 Aligned_cols=90 Identities=21% Similarity=0.339 Sum_probs=60.0
Q ss_pred eeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCCC-CceEEEEccc---ccCCCCC---CCCCccCCCCCce
Q 018026 197 THVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPAR-VHDVVEVTKA---AYDSCNS---SSTISKSTNPPTR 268 (362)
Q Consensus 197 ~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~-~hsV~~v~~~---~y~~C~~---~~~~~~~~~G~~~ 268 (362)
++.+|++ .++. |+. +..++++||+|+|..... .|+|+..+.. ..+.+.. ...+........+
T Consensus 2 ~v~m~~~~~~~~--------F~P--~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~ 71 (99)
T 1plc_A 2 DVLLGADDGSLA--------FVP--SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFE 71 (99)
T ss_dssp EEEESCTTCCSC--------EES--SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEE
T ss_pred EEEEecCCCcce--------EeC--CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEE
Confidence 4667654 3354 444 678999999999988654 7999765431 1111110 0111112223457
Q ss_pred EEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 269 ITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 269 v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
++++++|.|+|+|. .||+.||+..|+|.
T Consensus 72 ~tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 72 VALSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 89999999999999 89999999999984
No 27
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.74 E-value=3.1e-08 Score=78.59 Aligned_cols=90 Identities=22% Similarity=0.288 Sum_probs=60.8
Q ss_pred eeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-CCceEEEEcccc---cCCCCCCCCCccCCCCCceEE
Q 018026 196 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAA---YDSCNSSSTISKSTNPPTRIT 270 (362)
Q Consensus 196 ~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~hsV~~v~~~~---y~~C~~~~~~~~~~~G~~~v~ 270 (362)
.++.+|++ .++.+ +. +..++++||+|+|.+.. ..|+|+..+... .+.+.. +..........+++
T Consensus 3 ~~V~~~~~~~~~~F--------~P--~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~t 71 (97)
T 1b3i_A 3 VQIKMGTDKYAPLY--------EP--KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSN-TKLAIAPGSFYSVT 71 (97)
T ss_dssp EEEEEEETTTEEEE--------ES--SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCB-CCCCCSCSCCEEEE
T ss_pred EEEEEeccCCccEE--------eC--CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccc-cceecCCCCEEEEE
Confidence 46677754 44553 33 66899999999998765 479997654321 001101 11112223356788
Q ss_pred cCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 271 LGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 271 l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 f~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 72 LGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred eCCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999999 89999999999984
No 28
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.73 E-value=1.7e-08 Score=85.28 Aligned_cols=74 Identities=18% Similarity=0.189 Sum_probs=55.2
Q ss_pred cCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCC--CccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 221 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSST--ISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
...++++||+|.|.+....|+|...+. +..... ...-.....+++++++|.|+|+|. .||..||+..|.|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 778999999999999877899975432 111111 111122356899999999999999 69999999999997
Q ss_pred CCC
Q 018026 299 GGS 301 (362)
Q Consensus 299 ~~~ 301 (362)
...
T Consensus 96 ~~~ 98 (127)
T 3tu6_A 96 EPA 98 (127)
T ss_dssp SCT
T ss_pred cCC
Confidence 643
No 29
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.72 E-value=8e-08 Score=81.57 Aligned_cols=94 Identities=19% Similarity=0.337 Sum_probs=63.4
Q ss_pred cceEEEecC-CCCCcCCCCCCCCCCccccCceeeeCCEEEEeecCC----CccEEEeCcc------------------cc
Q 018026 21 AQTRHVVGD-ALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG----NHDVTRVTQS------------------SF 77 (362)
Q Consensus 21 a~~~~~VGg-~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~----~h~V~~V~~~------------------~y 77 (362)
+..++.||. ..++.+.+ ..+++++||+|+|.|.+. .|+++.+... +|
T Consensus 17 ~~~~V~v~~~~~~~~F~p----------~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~ 86 (139)
T 2aan_A 17 GPVTIEIGSKGEELAFDK----------TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANY 86 (139)
T ss_dssp CCEEEEEEBCTTSSSBSC----------SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTT
T ss_pred cCEEEEEEecCCccEEcC----------CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccc
Confidence 335667752 23566544 678899999999988754 6999876432 45
Q ss_pred CCCCCCCCC---CcCCCC-CcEEEEe--eccceEEEcCCCCCCCCCCeeeEEee
Q 018026 78 NACNTTSPL---SRTTNS-PASVTLT--ASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 78 ~~C~~~~~i---~~~~~G-~~~v~l~--~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
..|...+.+ .....| ...++++ ++|.|+|+|.+..||. ||+..|.|.
T Consensus 87 ~p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 87 LPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CCSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cCcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 555432211 112223 2445554 7999999999999999 999999883
No 30
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.72 E-value=1.2e-08 Score=81.60 Aligned_cols=91 Identities=21% Similarity=0.239 Sum_probs=60.6
Q ss_pred eeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-CCceEEEEccc---ccCCCCCCCCCccCCCC-CceE
Q 018026 196 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKA---AYDSCNSSSTISKSTNP-PTRI 269 (362)
Q Consensus 196 ~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~hsV~~v~~~---~y~~C~~~~~~~~~~~G-~~~v 269 (362)
.++.+|++ .++. |+. +..++++||+|.|.+.. ..|+|+..+.. .++.+...........| ..++
T Consensus 2 ~~V~m~~~~~~~~--------F~P--~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~ 71 (98)
T 1iuz_A 2 QIVKLGGDDGSLA--------FVP--SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVR 71 (98)
T ss_dssp EEEEESCTTSCCS--------EES--SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEE
T ss_pred EEEEEecCCCCcE--------EeC--CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEE
Confidence 45666653 3455 444 67899999999998865 48999765321 22222111000122333 3578
Q ss_pred EcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 270 TLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 270 ~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
+++++|.|+|+|.. ||++||+..|.|.
T Consensus 72 tf~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 72 KLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EcCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 89999999999996 9999999999984
No 31
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.71 E-value=2.3e-08 Score=84.41 Aligned_cols=73 Identities=23% Similarity=0.229 Sum_probs=54.7
Q ss_pred cCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCC--CCcCCCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~--i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+..++++||+|.|.+....|+|+..+. +..... ..........++++++|.|+|+|. .||..||+..|.|.
T Consensus 23 ~~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 788999999999999877899975422 111111 011112347899999999999999 69999999999998
Q ss_pred cC
Q 018026 126 AR 127 (362)
Q Consensus 126 ~~ 127 (362)
+.
T Consensus 96 ~~ 97 (127)
T 3tu6_A 96 EP 97 (127)
T ss_dssp SC
T ss_pred cC
Confidence 64
No 32
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.71 E-value=2.5e-08 Score=83.94 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=54.6
Q ss_pred cCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCCC--CcCCCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPL--SRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~i--~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+..++++||+|.|.+....|+|+..+. +...+.. ....+....++++++|.|+|+|. .||..||+..|+|.
T Consensus 22 ~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 688999999999999888999975321 2222211 11122336899999999999997 69999999999997
Q ss_pred c
Q 018026 126 A 126 (362)
Q Consensus 126 ~ 126 (362)
.
T Consensus 95 ~ 95 (124)
T 3ef4_A 95 K 95 (124)
T ss_dssp S
T ss_pred C
Confidence 5
No 33
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.70 E-value=3.2e-08 Score=78.84 Aligned_cols=90 Identities=22% Similarity=0.328 Sum_probs=59.4
Q ss_pred EEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecCC-CccEEEeCcc---ccCCCCC---CCCCCcCCCCCcE
Q 018026 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG-NHDVTRVTQS---SFNACNT---TSPLSRTTNSPAS 95 (362)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~-~h~V~~V~~~---~y~~C~~---~~~i~~~~~G~~~ 95 (362)
++.+|++ .++.+.+ +..++++||+|+|.+..+ .|+|+..+.. +.+.+.. ...+.........
T Consensus 2 ~v~m~~~~~~~~F~P----------~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~ 71 (99)
T 1plc_A 2 DVLLGADDGSLAFVP----------SEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFE 71 (99)
T ss_dssp EEEESCTTCCSCEES----------SEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEE
T ss_pred EEEEecCCCcceEeC----------CEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEE
Confidence 3556653 3455533 678999999999987754 7999764321 1111110 0111111223367
Q ss_pred EEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 96 VTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 96 v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
++++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 ~tf~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 72 VALSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EECCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 88999999999999 79999999999983
No 34
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.66 E-value=3.1e-08 Score=79.26 Aligned_cols=90 Identities=22% Similarity=0.272 Sum_probs=60.3
Q ss_pred eeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-CCceEEEEcccccC----CCCCCCCC----ccCCCC-
Q 018026 197 THVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYD----SCNSSSTI----SKSTNP- 265 (362)
Q Consensus 197 ~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~hsV~~v~~~~y~----~C~~~~~~----~~~~~G- 265 (362)
++.||++ .++. |+. +..++++||+|.|.... ..|+|+..+...++ .|.....+ .....|
T Consensus 2 ~V~~g~~~~~~~--------F~P--~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~ 71 (102)
T 1kdj_A 2 KVEVGDEVGNFK--------FYP--DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEP 71 (102)
T ss_dssp EEEESCTTCCCC--------EES--SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBC
T ss_pred EEEEecCCCccE--------EeC--CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCC
Confidence 5677764 3344 444 66899999999998755 47999865433321 11100001 112223
Q ss_pred CceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 266 PTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 266 ~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
..+++++++|.|+|+|. .||++||+..|.|.
T Consensus 72 ~~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 72 SFKAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 45788899999999999 99999999999984
No 35
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.66 E-value=4.1e-08 Score=82.60 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=54.8
Q ss_pred cCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCCC--ccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 221 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSSTI--SKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~~--~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
...++++||+|.|.+....|+|...+. +...... ........+++++++|.|+|+|. .||..||+..|+|.
T Consensus 22 ~~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp SEEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 778999999999999878999975422 2222111 11122346799999999999998 79999999999997
Q ss_pred C
Q 018026 299 G 299 (362)
Q Consensus 299 ~ 299 (362)
.
T Consensus 95 ~ 95 (124)
T 3ef4_A 95 K 95 (124)
T ss_dssp S
T ss_pred C
Confidence 6
No 36
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.64 E-value=5.3e-08 Score=77.50 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=59.8
Q ss_pred eeeeec-cCCcccCCCCCCCccccccCCceecCCEEEEEeCCC-CceEEEEccc---ccCCCCCC--CCCccCCCC-Cce
Q 018026 197 THVVGG-ALGWTVPPNASVGYQNWARNNNFSVGDILVFDYPAR-VHDVVEVTKA---AYDSCNSS--STISKSTNP-PTR 268 (362)
Q Consensus 197 ~~~VG~-~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~-~hsV~~v~~~---~y~~C~~~--~~~~~~~~G-~~~ 268 (362)
++.||+ +.++. |+. +..++++||+|+|..... .|+|+..+.. .++.+... ........| ..+
T Consensus 2 ~V~~~~~~~~~~--------F~P--~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~ 71 (99)
T 1byp_A 2 EVLLGSSDGGLA--------FVP--SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYS 71 (99)
T ss_dssp EEEESCTTSCCS--------EES--SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEE
T ss_pred EEEEecCCCcce--------EeC--CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEE
Confidence 566764 34454 444 668999999999988653 7998765321 12222100 000112233 457
Q ss_pred EEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 269 ITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 269 v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
++++++|.|+|+|. .||++||+..|+|.
T Consensus 72 ~~f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 72 VTLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEeCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 88899999999999 89999999999984
No 37
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.63 E-value=2.6e-08 Score=79.49 Aligned_cols=91 Identities=16% Similarity=0.178 Sum_probs=59.8
Q ss_pred eEEEecC-CCCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-CCccEEEeCcc---ccCCCCCCCCCCcCCCC-CcEE
Q 018026 23 TRHVVGD-ALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQS---SFNACNTTSPLSRTTNS-PASV 96 (362)
Q Consensus 23 ~~~~VGg-~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-~~h~V~~V~~~---~y~~C~~~~~i~~~~~G-~~~v 96 (362)
.++.+|+ +.++.+.+ +..++++||+|.|.+.. ..|+|+..+.. .++.+...........| ...+
T Consensus 2 ~~V~m~~~~~~~~F~P----------~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~ 71 (98)
T 1iuz_A 2 QIVKLGGDDGSLAFVP----------SKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVR 71 (98)
T ss_dssp EEEEESCTTSCCSEES----------SEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEE
T ss_pred EEEEEecCCCCcEEeC----------CEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEE
Confidence 3456665 34566544 67899999999998775 48999764311 12221110000112223 3578
Q ss_pred EEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 97 TLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 97 ~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+++++|.|+|+|.. ||+.||+..|.|.
T Consensus 72 tf~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 72 KLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp ECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EcCCCEEEEEEchh--hccCCCEEEEEEC
Confidence 88999999999986 9999999999984
No 38
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.63 E-value=8.7e-08 Score=75.95 Aligned_cols=90 Identities=27% Similarity=0.312 Sum_probs=60.2
Q ss_pred eEEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-CCccEEEeCccc---cCCCCCCCCCCcCCCCCcEEE
Q 018026 23 TRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSS---FNACNTTSPLSRTTNSPASVT 97 (362)
Q Consensus 23 ~~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-~~h~V~~V~~~~---y~~C~~~~~i~~~~~G~~~v~ 97 (362)
.++.+|++ .++.+.+ +..++++||+|+|.+.. ..|++....... .+.+.... ..........++
T Consensus 3 ~~V~~~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~t 71 (97)
T 1b3i_A 3 VQIKMGTDKYAPLYEP----------KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK-LAIAPGSFYSVT 71 (97)
T ss_dssp EEEEEEETTTEEEEES----------SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC-CCCSCSCCEEEE
T ss_pred EEEEEeccCCccEEeC----------CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc-eecCCCCEEEEE
Confidence 35567653 4566544 67899999999998765 379997643221 00111111 111223346788
Q ss_pred EeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 98 LTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 98 l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 f~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 72 LGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred eCCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 899999999999 89999999999983
No 39
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.59 E-value=1.1e-07 Score=75.58 Aligned_cols=89 Identities=22% Similarity=0.335 Sum_probs=59.1
Q ss_pred EEEecC-CCCCcCCCCCCCCCCccccCceeeeCCEEEEeecCC-CccEEEeCcc---ccCCCCC---CCCCCcCCCC-Cc
Q 018026 24 RHVVGD-ALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG-NHDVTRVTQS---SFNACNT---TSPLSRTTNS-PA 94 (362)
Q Consensus 24 ~~~VGg-~~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~-~h~V~~V~~~---~y~~C~~---~~~i~~~~~G-~~ 94 (362)
++.||+ +.++.+.+ +..++++||+|+|.+... .|+|...+.. .++.+.. ...+ ....| ..
T Consensus 2 ~V~~~~~~~~~~F~P----------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~-~~~~G~~~ 70 (99)
T 1byp_A 2 EVLLGSSDGGLAFVP----------SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDL-LNAPGEEY 70 (99)
T ss_dssp EEEESCTTSCCSEES----------SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCC-BCSTTCEE
T ss_pred EEEEecCCCcceEeC----------CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccce-eeCCCCEE
Confidence 455664 34455543 567899999999987753 7999764321 1222210 0111 12223 36
Q ss_pred EEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 95 SVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 95 ~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
.++++++|.|+|+|. .||+.||+..|.|.
T Consensus 71 ~~~f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 71 SVTLTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEeCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 788999999999999 79999999999983
No 40
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.57 E-value=9.4e-08 Score=76.44 Aligned_cols=90 Identities=16% Similarity=0.262 Sum_probs=59.5
Q ss_pred EEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-CCccEEEeCccccC----CCCCCCCC----CcCCCC-
Q 018026 24 RHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFN----ACNTTSPL----SRTTNS- 92 (362)
Q Consensus 24 ~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-~~h~V~~V~~~~y~----~C~~~~~i----~~~~~G- 92 (362)
++.||.+ .++.+.+ ...++++||+|+|.+.. ..|+|+......++ .|.....+ .....|
T Consensus 2 ~V~~g~~~~~~~F~P----------~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~ 71 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYP----------DSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEP 71 (102)
T ss_dssp EEEESCTTCCCCEES----------SEEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBC
T ss_pred EEEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCC
Confidence 4567753 3455543 67899999999998765 47999764322321 11110111 112222
Q ss_pred CcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 93 PASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 93 ~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
...++++++|.|+|+|. .||..||+..|.|.
T Consensus 72 ~~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 72 SFKAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 36778899999999999 89999999999983
No 41
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.54 E-value=1e-07 Score=75.64 Aligned_cols=91 Identities=21% Similarity=0.221 Sum_probs=60.1
Q ss_pred eeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCCC-CceEEEEccc---ccCCCCCCCCCccCCCC-CceE
Q 018026 196 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPAR-VHDVVEVTKA---AYDSCNSSSTISKSTNP-PTRI 269 (362)
Q Consensus 196 ~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~~-~hsV~~v~~~---~y~~C~~~~~~~~~~~G-~~~v 269 (362)
.++.+|++ .++. |+. ...++++||+|.|..... .|+|+..... +++.+...........| ..++
T Consensus 2 ~~V~m~~~~~~~~--------F~P--~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~ 71 (98)
T 2plt_A 2 ATVKLGADSGALE--------FVP--KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSV 71 (98)
T ss_dssp EEEEESCTTCCSS--------EES--SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEE
T ss_pred EEEEEecCCCCce--------EeC--CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEE
Confidence 46677644 3455 443 568899999999988654 7999764321 22221100000122233 3578
Q ss_pred EcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 270 TLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 270 ~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
+++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 72 KLTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp ECCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred EeCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 8899999999999 79999999999984
No 42
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.54 E-value=1.5e-07 Score=74.67 Aligned_cols=91 Identities=16% Similarity=0.156 Sum_probs=58.8
Q ss_pred eeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-CCceEEEEcccc--cCCCCCCCCCccCCCC-CceEE
Q 018026 196 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAA--YDSCNSSSTISKSTNP-PTRIT 270 (362)
Q Consensus 196 ~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~hsV~~v~~~~--y~~C~~~~~~~~~~~G-~~~v~ 270 (362)
.++.+|.+ .++. |+. ...++++||+|+|.... ..|+|+..+... -+.............| ..+++
T Consensus 3 ~~V~~~~~~~~~~--------F~P--~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~t 72 (98)
T 1pcs_A 3 ATVKMGSDSGALV--------FEP--STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTST 72 (98)
T ss_dssp EEEEESCTTSCSS--------EES--SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEEecCCCccE--------EeC--CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEE
Confidence 45677653 4455 443 66899999999998754 479987643210 0000000000112223 45688
Q ss_pred cCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 271 LGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 271 l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
++++|.|+|+|. .||+.||+..|.|.
T Consensus 73 f~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 73 FTEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred cCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 899999999999 79999999999984
No 43
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.47 E-value=1.8e-07 Score=74.17 Aligned_cols=91 Identities=24% Similarity=0.220 Sum_probs=58.9
Q ss_pred eEEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecCC-CccEEEeCcc---ccCCCCCCCCCCcCCCC-CcEE
Q 018026 23 TRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAG-NHDVTRVTQS---SFNACNTTSPLSRTTNS-PASV 96 (362)
Q Consensus 23 ~~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~~-~h~V~~V~~~---~y~~C~~~~~i~~~~~G-~~~v 96 (362)
.++.+|++ .++.+.+ ...++++||+|+|.+..+ .|+|...... +++.+...........| ...+
T Consensus 2 ~~V~m~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~ 71 (98)
T 2plt_A 2 ATVKLGADSGALEFVP----------KTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSV 71 (98)
T ss_dssp EEEEESCTTCCSSEES----------SEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEE
T ss_pred EEEEEecCCCCceEeC----------CEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEE
Confidence 35567643 3466544 568899999999987754 7999754211 11111000000112223 3578
Q ss_pred EEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 97 TLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 97 ~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
+++++|.|+|+|. .||+.||+..|.|.
T Consensus 72 tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 72 KLTAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp ECCSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred EeCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 8899999999999 79999999999983
No 44
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.43 E-value=3.3e-07 Score=72.68 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=58.2
Q ss_pred eEEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-CCccEEEeCccc--cCCCCCCCCCCcCCCC-CcEEE
Q 018026 23 TRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSS--FNACNTTSPLSRTTNS-PASVT 97 (362)
Q Consensus 23 ~~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-~~h~V~~V~~~~--y~~C~~~~~i~~~~~G-~~~v~ 97 (362)
.++.+|.+ .++.+.+ ...++++||+|+|.+.. ..|+|...+... .+..+..........| ...++
T Consensus 3 ~~V~~~~~~~~~~F~P----------~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~t 72 (98)
T 1pcs_A 3 ATVKMGSDSGALVFEP----------STVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTST 72 (98)
T ss_dssp EEEEESCTTSCSSEES----------SEEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEEecCCCccEEeC----------CEEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEE
Confidence 35567653 4566544 56899999999998765 479997532110 0000000000011222 35778
Q ss_pred EeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 98 LTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 98 l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
++++|.|+|+|. .||..||+..|.|.
T Consensus 73 f~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 73 FTEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred cCCCeEEEEEcC--CccccCCeEEEEEC
Confidence 899999999999 79999999999983
No 45
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.17 E-value=2.5e-06 Score=75.23 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=59.4
Q ss_pred CCceeeeeeccCCcccCCCCCCCccccccCCce-ecCCEEEEEeCC-C-------CceEEEEcccccC------------
Q 018026 193 RQPATHVVGGALGWTVPPNASVGYQNWARNNNF-SVGDILVFDYPA-R-------VHDVVEVTKAAYD------------ 251 (362)
Q Consensus 193 a~~~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~LvF~y~~-~-------~hsV~~v~~~~y~------------ 251 (362)
+...++.|+.+.++.+ +. +.+++ +.||.|.|.|.+ + .|+++..+..+++
T Consensus 40 ~~~~~V~I~~~d~m~F--------~P--~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~ 109 (167)
T 3ay2_A 40 AGNCAATVESNDNMQF--------NT--KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADT 109 (167)
T ss_dssp --CCEEEEEECTTSCB--------SC--SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGG
T ss_pred cCceEEEEEeCCCceE--------ec--ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccc
Confidence 3455777876666664 33 56778 889987777632 2 3999876544321
Q ss_pred ---CCCCCCCC---ccCCCCC-ceEEcC----CcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 252 ---SCNSSSTI---SKSTNPP-TRITLG----TAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 252 ---~C~~~~~~---~~~~~G~-~~v~l~----~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
.=+..+-+ .....|. ..|+++ ++|.|+|+|++++|=+ |||..|.|.
T Consensus 110 ~~v~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 110 DYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TTSCTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred ccccccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 10111101 1223332 345554 7899999999999998 999999985
No 46
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.12 E-value=1e-06 Score=70.44 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=46.5
Q ss_pred cCCceecCCEEEEEeCCC---CceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEe
Q 018026 221 RNNNFSVGDILVFDYPAR---VHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNV 297 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~---~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V 297 (362)
+..++++||+|.|.+.+. .|++.. .....+. .+....+....++.+++|.|.|+|. .||+.||+..|.|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~-~~~~~~~-----~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTI-KKLGIDV-----VVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEE-GGGTEEE-----EECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEE-ecCCcce-----eecCCcceeEEEecccCceEEEECc--cccCCCCEEEEEE
Confidence 678999999999987433 377643 1111110 0001111123466789999999997 6999999999998
Q ss_pred e
Q 018026 298 T 298 (362)
Q Consensus 298 ~ 298 (362)
.
T Consensus 100 e 100 (100)
T 4hci_A 100 K 100 (100)
T ss_dssp C
T ss_pred C
Confidence 4
No 47
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.05 E-value=6.4e-06 Score=65.66 Aligned_cols=89 Identities=20% Similarity=0.187 Sum_probs=56.9
Q ss_pred eeeeeecc-CCcccCCCCCCCccccccCCceecCCEEEEEeCC-CCceEEEEcccccCCCCC-------CCCCccCCCC-
Q 018026 196 ATHVVGGA-LGWTVPPNASVGYQNWARNNNFSVGDILVFDYPA-RVHDVVEVTKAAYDSCNS-------SSTISKSTNP- 265 (362)
Q Consensus 196 ~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~~-~~hsV~~v~~~~y~~C~~-------~~~~~~~~~G- 265 (362)
.++.||.+ .+..+ .. ...++++||+|+|.... ..|+|+.-... + .+.. .........|
T Consensus 3 ~~V~~~~~~~~~~f--------~p--~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~-~-~~~~g~~~~~~~~~~~~i~pG~ 70 (105)
T 3cvb_A 3 FTVKMGADSGLFQF--------EP--ANVTVHPGDTVKWVNNKLPPHNILFDDKQ-V-PGASKELADKLSHSQLMFSPGE 70 (105)
T ss_dssp EEEEESCTTCCSCE--------ES--SEEEECTTEEEEEEECSSCCEEEEECTTS-S-GGGCHHHHHHHCEEEEECSTTC
T ss_pred EEEEEeecCCccEE--------eC--CEEEEcCCCEEEEEECCCCCCeEEEeCCC-C-CcccccccccccccccccCCCC
Confidence 35677653 45554 33 56789999999997643 47998754211 1 1100 0000112222
Q ss_pred CceEEc---CCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 266 PTRITL---GTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 266 ~~~v~l---~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
..++++ +++|.+||+|. .|++.||+..|.|.
T Consensus 71 ~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 71 SYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 345666 78999999999 79999999999985
No 48
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.02 E-value=1.1e-05 Score=64.28 Aligned_cols=89 Identities=20% Similarity=0.206 Sum_probs=56.9
Q ss_pred eEEEecCC-CCCcCCCCCCCCCCccccCceeeeCCEEEEeecC-CCccEEEeCccccCCCCC--------CCCCCcCCCC
Q 018026 23 TRHVVGDA-LGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAA-GNHDVTRVTQSSFNACNT--------TSPLSRTTNS 92 (362)
Q Consensus 23 ~~~~VGg~-~GW~~~~~~~~~y~~Wa~~~~f~vGD~L~F~~~~-~~h~V~~V~~~~y~~C~~--------~~~i~~~~~G 92 (362)
.++.||.+ .+..+.+ ...+++.||+|+|.... ..|+|..-.. .+ .+.. ..........
T Consensus 3 ~~V~~~~~~~~~~f~p----------~~i~v~~Gd~V~~~N~~~~~H~v~~~~~-~~-~~~~g~~~~~~~~~~~~i~pG~ 70 (105)
T 3cvb_A 3 FTVKMGADSGLFQFEP----------ANVTVHPGDTVKWVNNKLPPHNILFDDK-QV-PGASKELADKLSHSQLMFSPGE 70 (105)
T ss_dssp EEEEESCTTCCSCEES----------SEEEECTTEEEEEEECSSCCEEEEECTT-SS-GGGCHHHHHHHCEEEEECSTTC
T ss_pred EEEEEeecCCccEEeC----------CEEEEcCCCEEEEEECCCCCCeEEEeCC-CC-CcccccccccccccccccCCCC
Confidence 35567653 4566543 56789999999997653 4799865311 11 1100 0000111122
Q ss_pred CcEEEE---eeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 93 PASVTL---TASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 93 ~~~v~l---~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
...+++ +++|.|||+|. .|+..||+..|.|.
T Consensus 71 ~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 71 SYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 356777 78999999999 79999999999985
No 49
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.00 E-value=8.4e-06 Score=68.03 Aligned_cols=71 Identities=18% Similarity=0.171 Sum_probs=51.4
Q ss_pred cCCceecCCEEEEEeCCCCceEEEEcccccCCCCCCCC--CccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 221 RNNNFSVGDILVFDYPARVHDVVEVTKAAYDSCNSSST--ISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~~hsV~~v~~~~y~~C~~~~~--~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
...++++||+|.|......|+|+.... |..... ..........++++++|.|+|+|.. |+. |+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~ 91 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVG 91 (122)
T ss_dssp SEEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEe
Confidence 668999999999998777899976431 111111 1111123467889999999999997 888 99999997
Q ss_pred CC
Q 018026 299 GG 300 (362)
Q Consensus 299 ~~ 300 (362)
..
T Consensus 92 ~~ 93 (122)
T 2ux6_A 92 DA 93 (122)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 50
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.97 E-value=1.1e-05 Score=67.41 Aligned_cols=71 Identities=23% Similarity=0.257 Sum_probs=51.1
Q ss_pred cCceeeeCCEEEEeecCCCccEEEeCccccCCCCCCCC--CCcCCCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEee
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSP--LSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V~~~~y~~C~~~~~--i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
...++++||+|.|.+....|+|+... .|..... ..........++++++|.|+|+|.. |+. |+..|.|.
T Consensus 21 ~~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~ 91 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVG 91 (122)
T ss_dssp SEEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEES
T ss_pred CEEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEe
Confidence 67889999999998887789997532 1211111 1111122367899999999999987 877 99999997
Q ss_pred cC
Q 018026 126 AR 127 (362)
Q Consensus 126 ~~ 127 (362)
..
T Consensus 92 ~~ 93 (122)
T 2ux6_A 92 DA 93 (122)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 51
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.97 E-value=1.1e-05 Score=68.00 Aligned_cols=67 Identities=18% Similarity=0.239 Sum_probs=47.3
Q ss_pred cCceeeeCCEEEEeecCC-CccEEEeCccc----cCCCCCCCCCCcCCCC-CcEEEEeeccceEEEcCCCCCCCCCCeee
Q 018026 48 ANQTFTVGDTLVFNFAAG-NHDVTRVTQSS----FNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLA 121 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~-~h~V~~V~~~~----y~~C~~~~~i~~~~~G-~~~v~l~~~G~~yFic~~~~HC~~Gmk~~ 121 (362)
+..++++||+|.|..... .|+|...+... |+ . .....| ...++++++|.|+|+|.. |. ||+..
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~-----s--~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~ 128 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFR-----G--EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 128 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEE-----C--CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCccccc-----c--cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEE
Confidence 678899999999976543 69997533211 11 0 011222 357888999999999997 75 99999
Q ss_pred EEee
Q 018026 122 INVS 125 (362)
Q Consensus 122 I~V~ 125 (362)
|.|.
T Consensus 129 I~V~ 132 (132)
T 3c75_A 129 VIVE 132 (132)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 52
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.90 E-value=2.4e-06 Score=68.24 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=45.8
Q ss_pred cCceeeeCCEEEEeecCC---CccEEEeCccccCCCCCCCCCCcCCCCC---cEEEEeeccceEEEcCCCCCCCCCCeee
Q 018026 48 ANQTFTVGDTLVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNSP---ASVTLTASGPHYFICSFPGHCLGGQKLA 121 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~---~h~V~~V~~~~y~~C~~~~~i~~~~~G~---~~v~l~~~G~~yFic~~~~HC~~Gmk~~ 121 (362)
+..++++||+|.|.+.+. .|++.. .....+ .....|. ..++.+++|.|.|+|. .||..||+..
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~-~~~~~~--------~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~ 96 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTI-KKLGID--------VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGK 96 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEE-GGGTEE--------EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEE
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEE-ecCCcc--------eeecCCcceeEEEecccCceEEEECc--cccCCCCEEE
Confidence 678999999999987642 376643 111111 0111122 3456679999999997 5999999999
Q ss_pred EEee
Q 018026 122 INVS 125 (362)
Q Consensus 122 I~V~ 125 (362)
|.|.
T Consensus 97 i~Ve 100 (100)
T 4hci_A 97 VIVK 100 (100)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 53
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.90 E-value=4.2e-05 Score=64.46 Aligned_cols=91 Identities=14% Similarity=0.234 Sum_probs=58.0
Q ss_pred eeeeeccCCcccCCCCCCCccccccCCceecC-CEEEEEeCC-C-------CceEEEEcccc----------------cC
Q 018026 197 THVVGGALGWTVPPNASVGYQNWARNNNFSVG-DILVFDYPA-R-------VHDVVEVTKAA----------------YD 251 (362)
Q Consensus 197 ~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vG-D~LvF~y~~-~-------~hsV~~v~~~~----------------y~ 251 (362)
++.|+.+.++.+ +. +..+++.| |.+.|.+.+ + .|+++..+..+ |.
T Consensus 4 ~v~i~~~d~m~F--------~p--~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v 73 (129)
T 1cuo_A 4 ETTVTSGDTMTY--------ST--RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFV 73 (129)
T ss_dssp EEEEEECSSSCC--------SC--SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTS
T ss_pred EEEEEeCCCceE--------cc--CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccc
Confidence 566665555654 33 66889999 987777743 2 39998775442 21
Q ss_pred CCCCCCCC---ccCCCCC---ceEEcC---CcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 252 SCNSSSTI---SKSTNPP---TRITLG---TAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 252 ~C~~~~~~---~~~~~G~---~~v~l~---~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
.=+..+-+ .....|. .+|++. ++|.|+|+|++++|=+ |||..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 74 TPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 11111111 1223332 344443 8999999999999999 899999985
No 54
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.89 E-value=9.3e-05 Score=62.32 Aligned_cols=92 Identities=13% Similarity=0.215 Sum_probs=58.4
Q ss_pred eEEEecCCCCCcCCCCCCCCCCccccCceeeeC-CEEEEeecCC--------CccEEEeCccc----------------c
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVG-DTLVFNFAAG--------NHDVTRVTQSS----------------F 77 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f~vG-D~L~F~~~~~--------~h~V~~V~~~~----------------y 77 (362)
.++.|+.+..+.+.+ +..+++.| |.+.|.|.+. .|+++..+..+ |
T Consensus 3 ~~v~i~~~d~m~F~p----------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~ 72 (129)
T 1cuo_A 3 CETTVTSGDTMTYST----------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNF 72 (129)
T ss_dssp CEEEEEECSSSCCSC----------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTT
T ss_pred EEEEEEeCCCceEcc----------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccc
Confidence 355666555566644 67899999 9877777542 39998764432 2
Q ss_pred CCCCCCCCC---CcCCCCC-cEEEEe-----eccceEEEcCCCCCCCCCCeeeEEee
Q 018026 78 NACNTTSPL---SRTTNSP-ASVTLT-----ASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 78 ~~C~~~~~i---~~~~~G~-~~v~l~-----~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
..=+..+-+ .....|. ..++++ ++|.|+|+|++++|=+ |||..|.|.
T Consensus 73 v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 73 VTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp SCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred cccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 110001111 1122332 456664 7899999999999977 999999985
No 55
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.87 E-value=2.9e-05 Score=68.34 Aligned_cols=92 Identities=14% Similarity=0.212 Sum_probs=58.7
Q ss_pred eEEEecCCCCCcCCCCCCCCCCccccCcee-eeCCEEEEeecCC--------CccEEEeCccccC---------------
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAAG--------NHDVTRVTQSSFN--------------- 78 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f-~vGD~L~F~~~~~--------~h~V~~V~~~~y~--------------- 78 (362)
.++.|+.++++.|.+ +..++ +.||+|.|.|.+. .|+++..+..+++
T Consensus 43 ~~V~I~~~d~m~F~P----------~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v 112 (167)
T 3ay2_A 43 CAATVESNDNMQFNT----------KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYV 112 (167)
T ss_dssp CEEEEEECTTSCBSC----------SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTS
T ss_pred eEEEEEeCCCceEec----------ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccc
Confidence 466777665677654 56778 7899877766532 2998875443221
Q ss_pred CCCCCCCC---CcCCCCC-cEEEEe----eccceEEEcCCCCCCCCCCeeeEEee
Q 018026 79 ACNTTSPL---SRTTNSP-ASVTLT----ASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 79 ~C~~~~~i---~~~~~G~-~~v~l~----~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
.=+..+-+ .....|. ..++++ ++|.|+|+|++++|=+ |||..|.|.
T Consensus 113 ~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 113 KPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 00000000 1122232 466675 7899999999999977 999999986
No 56
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.77 E-value=3.8e-05 Score=61.85 Aligned_cols=67 Identities=21% Similarity=0.171 Sum_probs=47.5
Q ss_pred cCCceecCCEEEEEeCCC-CceEEEEcccc----cCCCCCCCCCccCCCC-CceEEcCCcccEEEEcCCCCCCCCCCeEE
Q 018026 221 RNNNFSVGDILVFDYPAR-VHDVVEVTKAA----YDSCNSSSTISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKLA 294 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~-~hsV~~v~~~~----y~~C~~~~~~~~~~~G-~~~v~l~~~G~~yFic~~~~HC~~GmKl~ 294 (362)
...++++||+|.|..... .|+|...+..+ |+.+. ...| ..+++++++|.|+|+|.. |. ||+..
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~~-------~~pG~~~~~tf~~~G~y~y~C~~--H~--gM~G~ 101 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPM-------MKKEQAYSLTFTEAGTYDYHCTP--HP--FMRGK 101 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECCC-------BCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCcccccccc-------cCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 668999999999986544 79987543211 32221 2222 356788999999999997 64 99999
Q ss_pred EEee
Q 018026 295 VNVT 298 (362)
Q Consensus 295 I~V~ 298 (362)
|.|.
T Consensus 102 i~V~ 105 (105)
T 2ov0_A 102 VVVE 105 (105)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9884
No 57
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.70 E-value=5.7e-05 Score=61.01 Aligned_cols=67 Identities=22% Similarity=0.232 Sum_probs=47.7
Q ss_pred cCCceecCCEEEEEeCCC-CceEEEEccc----ccCCCCCCCCCccCCCC-CceEEcCCcccEEEEcCCCCCCCCCCeEE
Q 018026 221 RNNNFSVGDILVFDYPAR-VHDVVEVTKA----AYDSCNSSSTISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKLA 294 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~-~hsV~~v~~~----~y~~C~~~~~~~~~~~G-~~~v~l~~~G~~yFic~~~~HC~~GmKl~ 294 (362)
...++++||+|.|..... .|+|+..+.. .|+. .....| ..+++++++|.|.|+|.. |. ||+..
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-------~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~ 102 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 102 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 668999999999986543 6998654322 1211 112223 356888999999999997 87 99999
Q ss_pred EEee
Q 018026 295 VNVT 298 (362)
Q Consensus 295 I~V~ 298 (362)
|.|.
T Consensus 103 I~V~ 106 (106)
T 1id2_A 103 VIVE 106 (106)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 58
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.65 E-value=0.00015 Score=61.03 Aligned_cols=91 Identities=22% Similarity=0.319 Sum_probs=55.1
Q ss_pred eeeeeccCCcccCCCCCCCccccccCCce-ecCCEEEEEeCC-C-------CceEEEEcccc----------------cC
Q 018026 197 THVVGGALGWTVPPNASVGYQNWARNNNF-SVGDILVFDYPA-R-------VHDVVEVTKAA----------------YD 251 (362)
Q Consensus 197 ~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~LvF~y~~-~-------~hsV~~v~~~~----------------y~ 251 (362)
++.|+.+.++.+ +. +..++ +.||+|.|.|.+ + .|+++..+..+ |.
T Consensus 3 ~v~v~~~d~m~F--------~p--~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~ 72 (128)
T 2iaa_C 3 DVSIEGNDSMQF--------NT--KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYV 72 (128)
T ss_dssp EEEEEECTTSCB--------SC--SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEeCCCceE--------ec--CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhcccccccc
Confidence 456665556664 33 45666 679987777743 2 39998765432 21
Q ss_pred CCCCCCCC---ccCCCCC-ceEEc--C--Cccc-EEEEcCCCCCCCCCCeEEEEee
Q 018026 252 SCNSSSTI---SKSTNPP-TRITL--G--TAGE-HYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 252 ~C~~~~~~---~~~~~G~-~~v~l--~--~~G~-~yFic~~~~HC~~GmKl~I~V~ 298 (362)
.=+..+-+ .....|. ..+++ . ++|. |.|+|++++|=+ |||..|.|.
T Consensus 73 ~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 73 KAGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 11111101 1223332 34444 4 6784 999999999999 999999985
No 59
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.65 E-value=8.5e-05 Score=59.76 Aligned_cols=67 Identities=21% Similarity=0.227 Sum_probs=47.0
Q ss_pred cCceeeeCCEEEEeecCC-CccEEEeCccc----cCCCCCCCCCCcCCCC-CcEEEEeeccceEEEcCCCCCCCCCCeee
Q 018026 48 ANQTFTVGDTLVFNFAAG-NHDVTRVTQSS----FNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLA 121 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~-~h~V~~V~~~~----y~~C~~~~~i~~~~~G-~~~v~l~~~G~~yFic~~~~HC~~Gmk~~ 121 (362)
...++++||+|.|..... .|+|......+ |+.+ ....| ...++++++|.|+|+|.. |. ||+..
T Consensus 33 ~~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~tf~~~G~y~y~C~~--H~--gM~G~ 101 (105)
T 2ov0_A 33 PELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLTFTEAGTYDYHCTP--HP--FMRGK 101 (105)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 678999999999976644 79987532211 2211 11122 357888999999999987 54 99999
Q ss_pred EEee
Q 018026 122 INVS 125 (362)
Q Consensus 122 I~V~ 125 (362)
|.|.
T Consensus 102 i~V~ 105 (105)
T 2ov0_A 102 VVVE 105 (105)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 60
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.64 E-value=0.00012 Score=61.61 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=54.6
Q ss_pred eeeeeccCCcccCCCCCCCccccccCCce-ecCCEEEEEeCCC--------CceEEEEcccc----------------cC
Q 018026 197 THVVGGALGWTVPPNASVGYQNWARNNNF-SVGDILVFDYPAR--------VHDVVEVTKAA----------------YD 251 (362)
Q Consensus 197 ~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~LvF~y~~~--------~hsV~~v~~~~----------------y~ 251 (362)
++.|+.+.+..+ +. +..++ +.||.|.|.+.+. .|+++..+..+ |.
T Consensus 4 ~v~v~~~d~m~F--------~p--~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~ 73 (129)
T 2ccw_A 4 EATVESNDAMQY--------NV--KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYV 73 (129)
T ss_dssp EEEEEECTTSCB--------SC--SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEeCCCccE--------ec--ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccc
Confidence 566766555654 33 45566 6699877777432 39998765432 21
Q ss_pred CCCCCCCC---ccCCCCC-ce--EEcC--Cccc-EEEEcCCCCCCCCCCeEEEEee
Q 018026 252 SCNSSSTI---SKSTNPP-TR--ITLG--TAGE-HYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 252 ~C~~~~~~---~~~~~G~-~~--v~l~--~~G~-~yFic~~~~HC~~GmKl~I~V~ 298 (362)
.=+..+-+ .....|. .. |+.. ++|. |+|+|++++|=+ |||..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 74 KAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 11111101 1123332 33 4444 5665 999999999998 999999985
No 61
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.62 E-value=0.00013 Score=61.38 Aligned_cols=91 Identities=21% Similarity=0.289 Sum_probs=56.0
Q ss_pred eeeeeccCCcccCCCCCCCccccccCCce-ecCCEEEEEeCCC--------CceEEEEcccccC----------------
Q 018026 197 THVVGGALGWTVPPNASVGYQNWARNNNF-SVGDILVFDYPAR--------VHDVVEVTKAAYD---------------- 251 (362)
Q Consensus 197 ~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f-~vGD~LvF~y~~~--------~hsV~~v~~~~y~---------------- 251 (362)
++.|+.+.++.+. . +..++ +.||+|.|.+.+. .|+++..+..+++
T Consensus 4 ~v~v~~~d~m~F~--------p--~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~ 73 (128)
T 1nwp_A 4 KVTVDSTDQMSFN--------T--KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYL 73 (128)
T ss_dssp EEEEEECTTSCBS--------C--SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTS
T ss_pred EEEEEeCCCccEe--------c--CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccc
Confidence 5667666566643 3 56778 8899887777432 3999876543221
Q ss_pred CCCCCCCC---ccCCCCC-ceEEc--C--Cccc-EEEEcCCCCCCCCCCeEEEEee
Q 018026 252 SCNSSSTI---SKSTNPP-TRITL--G--TAGE-HYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 252 ~C~~~~~~---~~~~~G~-~~v~l--~--~~G~-~yFic~~~~HC~~GmKl~I~V~ 298 (362)
.=+..+-+ .....|. ..+++ . ++|. |+|+|++++|=+ |||..|.|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 74 KDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 10100101 1223332 34444 3 5676 999999999999 999999883
No 62
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.59 E-value=0.00022 Score=60.02 Aligned_cols=92 Identities=17% Similarity=0.253 Sum_probs=57.3
Q ss_pred eEEEecCCCCCcCCCCCCCCCCccccCcee-eeCCEEEEeecCC--------CccEEEeCccccC---------------
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAAG--------NHDVTRVTQSSFN--------------- 78 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f-~vGD~L~F~~~~~--------~h~V~~V~~~~y~--------------- 78 (362)
.++.|+.+.++.+.+ +..++ +.||+|.|.|.+. .|+++..+..+.+
T Consensus 3 ~~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~ 72 (128)
T 1nwp_A 3 CKVTVDSTDQMSFNT----------KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQY 72 (128)
T ss_dssp CEEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTT
T ss_pred EEEEEEeCCCccEec----------CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccc
Confidence 456676665677754 56778 7899888877643 2999865433221
Q ss_pred -CCCCCCCC---CcCCCCC-cEEEEe----eccc-eEEEcCCCCCCCCCCeeeEEee
Q 018026 79 -ACNTTSPL---SRTTNSP-ASVTLT----ASGP-HYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 79 -~C~~~~~i---~~~~~G~-~~v~l~----~~G~-~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
.=+...-+ .....|. ..++++ ++|. |+|+|++++|=+ |||..|.|.
T Consensus 73 ~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 73 LKDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp SCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred cccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 00000000 1122332 456665 4676 999999999977 999999883
No 63
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.59 E-value=0.00011 Score=59.27 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=47.3
Q ss_pred cCceeeeCCEEEEeecCC-CccEEEeCccc----cCCCCCCCCCCcCCCC-CcEEEEeeccceEEEcCCCCCCCCCCeee
Q 018026 48 ANQTFTVGDTLVFNFAAG-NHDVTRVTQSS----FNACNTTSPLSRTTNS-PASVTLTASGPHYFICSFPGHCLGGQKLA 121 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~-~h~V~~V~~~~----y~~C~~~~~i~~~~~G-~~~v~l~~~G~~yFic~~~~HC~~Gmk~~ 121 (362)
...++++||+|.|..... .|+|...+... |++ .....| ...++++++|.|.|+|.. |. ||+..
T Consensus 34 ~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~~~~~~~s-------~~l~~g~~~~~tf~~~G~y~~~C~~--H~--~M~G~ 102 (106)
T 1id2_A 34 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 102 (106)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCcEEEEEeCCCCCcccccc-------cccCCCCEEEEEeCCCEEEEEEeCC--CC--CCEEE
Confidence 678999999999976543 69986532210 111 011222 357888999999999997 76 99999
Q ss_pred EEee
Q 018026 122 INVS 125 (362)
Q Consensus 122 I~V~ 125 (362)
|.|.
T Consensus 103 I~V~ 106 (106)
T 1id2_A 103 VIVE 106 (106)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9883
No 64
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.53 E-value=0.00019 Score=60.43 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=55.4
Q ss_pred eEEEecCCCCCcCCCCCCCCCCccccCcee-eeCCEEEEeecCC--------CccEEEeCccc----------------c
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAAG--------NHDVTRVTQSS----------------F 77 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f-~vGD~L~F~~~~~--------~h~V~~V~~~~----------------y 77 (362)
.++.|+.+++..+.+ +..++ +.||+|.|.|.+. .|+++..+..+ |
T Consensus 3 ~~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~ 72 (129)
T 2ccw_A 3 CEATVESNDAMQYNV----------KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDY 72 (129)
T ss_dssp SEEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTT
T ss_pred EEEEEEeCCCccEec----------ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccc
Confidence 456676655666644 45566 6699877777542 29998754432 2
Q ss_pred CCCCCCCCC---CcCCCCC-cEEEEe----eccc-eEEEcCCCCCCCCCCeeeEEee
Q 018026 78 NACNTTSPL---SRTTNSP-ASVTLT----ASGP-HYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 78 ~~C~~~~~i---~~~~~G~-~~v~l~----~~G~-~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
..=+..+-+ .....|. ..++++ ++|. |+|+|++++|=+ |||..|.|.
T Consensus 73 ~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 73 VKAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp SCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred cccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 110000101 1122232 456665 4665 999999999977 999999985
No 65
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.53 E-value=0.00035 Score=58.71 Aligned_cols=91 Identities=20% Similarity=0.259 Sum_probs=55.7
Q ss_pred EEEecCCCCCcCCCCCCCCCCccccCcee-eeCCEEEEeecCC--------CccEEEeCccc----------------cC
Q 018026 24 RHVVGDALGWIVPPNGPATYSNWAANQTF-TVGDTLVFNFAAG--------NHDVTRVTQSS----------------FN 78 (362)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f-~vGD~L~F~~~~~--------~h~V~~V~~~~----------------y~ 78 (362)
++.|+.++++.+.+ +..++ +.||+|.|.|.+. .|+++..+..+ |.
T Consensus 3 ~v~v~~~d~m~F~p----------~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~ 72 (128)
T 2iaa_C 3 DVSIEGNDSMQFNT----------KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYV 72 (128)
T ss_dssp EEEEEECTTSCBSC----------SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEeCCCceEec----------CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhcccccccc
Confidence 45566555677654 45666 6699887777643 29997654332 21
Q ss_pred CCCCCCCC---CcCCCC-CcEEEEe----eccc-eEEEcCCCCCCCCCCeeeEEee
Q 018026 79 ACNTTSPL---SRTTNS-PASVTLT----ASGP-HYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 79 ~C~~~~~i---~~~~~G-~~~v~l~----~~G~-~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
.=+..+-+ .....| ...++++ ++|. |.|+|++++|=+ |||..|.|.
T Consensus 73 ~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 73 KAGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 10000101 112233 2456665 6784 999999999977 999999985
No 66
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.51 E-value=0.00014 Score=61.18 Aligned_cols=67 Identities=22% Similarity=0.232 Sum_probs=47.8
Q ss_pred cCCceecCCEEEEEeCCC-CceEEEEccc----ccCCCCCCCCCccCCCC-CceEEcCCcccEEEEcCCCCCCCCCCeEE
Q 018026 221 RNNNFSVGDILVFDYPAR-VHDVVEVTKA----AYDSCNSSSTISKSTNP-PTRITLGTAGEHYFFCTFPGHCSAGQKLA 294 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~-~hsV~~v~~~----~y~~C~~~~~~~~~~~G-~~~v~l~~~G~~yFic~~~~HC~~GmKl~ 294 (362)
+..++++||+|.|..... .|+|+..+.. .|+. .....| ..+++++++|.|+|+|.. |. ||+..
T Consensus 60 ~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g~~~~~s-------~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~ 128 (132)
T 3c75_A 60 PEVTIKAGETVYWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGK 128 (132)
T ss_dssp SEEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEE
T ss_pred CEEEECCCCEEEEEECCCCceEEEEeCCCCCcccccc-------cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEE
Confidence 668999999999986543 6998754322 1211 112223 356788999999999997 76 99999
Q ss_pred EEee
Q 018026 295 VNVT 298 (362)
Q Consensus 295 I~V~ 298 (362)
|.|.
T Consensus 129 I~V~ 132 (132)
T 3c75_A 129 VIVE 132 (132)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 67
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=96.85 E-value=0.00039 Score=61.58 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=52.3
Q ss_pred eeeeCCEEEE---eecCC------CccEEEeCccccCCCCCCCCCC-cC----CCCCcEEEEe-------------ecc-
Q 018026 51 TFTVGDTLVF---NFAAG------NHDVTRVTQSSFNACNTTSPLS-RT----TNSPASVTLT-------------ASG- 102 (362)
Q Consensus 51 ~f~vGD~L~F---~~~~~------~h~V~~V~~~~y~~C~~~~~i~-~~----~~G~~~v~l~-------------~~G- 102 (362)
..++||.|-| +|..+ .+.|++|++.+|+.|+...... .+ -.+...|++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 4567999977 55432 3778999999999998753111 11 1223344442 245
Q ss_pred ceEEEcCCC-----------CCCCC-CCeeeEEeecCC
Q 018026 103 PHYFICSFP-----------GHCLG-GQKLAINVSARG 128 (362)
Q Consensus 103 ~~yFic~~~-----------~HC~~-Gmk~~I~V~~~~ 128 (362)
.|||||.-. ++|.. +|||.|.|....
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~ 142 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDA 142 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC-
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCC
Confidence 789998863 78988 999999997653
No 68
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=96.74 E-value=0.0007 Score=59.98 Aligned_cols=79 Identities=20% Similarity=0.283 Sum_probs=51.1
Q ss_pred ceecCCEEEEE---eC------CCCceEEEEcccccCCCCCCC-CCc--cCC--CCCceEEcC-------------Ccc-
Q 018026 224 NFSVGDILVFD---YP------ARVHDVVEVTKAAYDSCNSSS-TIS--KST--NPPTRITLG-------------TAG- 275 (362)
Q Consensus 224 ~f~vGD~LvF~---y~------~~~hsV~~v~~~~y~~C~~~~-~~~--~~~--~G~~~v~l~-------------~~G- 275 (362)
..++||.|-|- |. ...+.|++|++++|+.|+... ... .-+ .+...+++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 45679999884 43 234789999999999998763 111 111 122223221 244
Q ss_pred cEEEEcCCC-----------CCCCC-CCeEEEEeeCCCC
Q 018026 276 EHYFFCTFP-----------GHCSA-GQKLAVNVTGGSS 302 (362)
Q Consensus 276 ~~yFic~~~-----------~HC~~-GmKl~I~V~~~~~ 302 (362)
.|||||+-. |+|.. +|||.|.|.....
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~ 143 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDAS 143 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC--
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCCC
Confidence 799999864 79975 9999999966543
No 69
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=96.72 E-value=0.0048 Score=61.37 Aligned_cols=76 Identities=24% Similarity=0.320 Sum_probs=50.9
Q ss_pred cCceeeeCCEEEEeecCC---CccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeeccceEEEcCCCCCCCCCCeeeEEe
Q 018026 48 ANQTFTVGDTLVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 124 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~---~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V 124 (362)
...+++.||+|+|++.+. .|++..-.......|. +.-..+....|+++++|.+||.|...+|=..||+..|.|
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~----i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V 130 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV----NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQV 130 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB----CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee----cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEE
Confidence 568899999999988753 3776431111112232 111112223456678999999999988988899999999
Q ss_pred ecC
Q 018026 125 SAR 127 (362)
Q Consensus 125 ~~~ 127 (362)
...
T Consensus 131 ~~~ 133 (447)
T 2dv6_A 131 LPG 133 (447)
T ss_dssp ESS
T ss_pred eCC
Confidence 754
No 70
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.60 E-value=0.00086 Score=54.14 Aligned_cols=67 Identities=10% Similarity=0.112 Sum_probs=43.8
Q ss_pred cCceeeeCCEEEEeecCC---CccEEEeCccccCCCCCCCCCCcCCCCC-cEEEE--eeccceEEEcCCCCCCC-CCCee
Q 018026 48 ANQTFTVGDTLVFNFAAG---NHDVTRVTQSSFNACNTTSPLSRTTNSP-ASVTL--TASGPHYFICSFPGHCL-GGQKL 120 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~---~h~V~~V~~~~y~~C~~~~~i~~~~~G~-~~v~l--~~~G~~yFic~~~~HC~-~Gmk~ 120 (362)
...+++.||.|.|.+.+. .|++.. ...+. .+ ....|. ..+++ +++|.|+|.|.. ||. .+|+.
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~~H~~~i-~~~~~-~~-------~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g 106 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPISEGFSI-DAFGV-QE-------VIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPG 106 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEE-GGGTE-EE-------EECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCE
T ss_pred CEEEEeCCCEEEEEEEECCCCeEEEEE-cCCCc-ee-------EeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEE
Confidence 567899999999987642 477643 21111 11 112222 34444 899999999988 774 34999
Q ss_pred eEEee
Q 018026 121 AINVS 125 (362)
Q Consensus 121 ~I~V~ 125 (362)
.|.|.
T Consensus 107 ~i~V~ 111 (112)
T 1iby_A 107 TLNVV 111 (112)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99885
No 71
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.57 E-value=0.0011 Score=53.41 Aligned_cols=67 Identities=13% Similarity=0.111 Sum_probs=44.0
Q ss_pred cCCceecCCEEEEEeCCC---CceEEEEcccccCCCCCCCCCccCCCCC-c--eEEcCCcccEEEEcCCCCCCCC-CCeE
Q 018026 221 RNNNFSVGDILVFDYPAR---VHDVVEVTKAAYDSCNSSSTISKSTNPP-T--RITLGTAGEHYFFCTFPGHCSA-GQKL 293 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~---~hsV~~v~~~~y~~C~~~~~~~~~~~G~-~--~v~l~~~G~~yFic~~~~HC~~-GmKl 293 (362)
...++++||.|.|.+.+. .|++.. ..... . .....|. . .++.+++|.|+|.|.. ||.. +|+.
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~~~H~~~i-~~~~~-~-------~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g 106 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSPISEGFSI-DAFGV-Q-------EVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPG 106 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSSCEEEEE-GGGTE-E-------EEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCE
T ss_pred CEEEEeCCCEEEEEEEECCCCeEEEEE-cCCCc-e-------eEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEE
Confidence 557899999999987432 577643 21111 1 1122232 2 3445999999999997 7753 4999
Q ss_pred EEEee
Q 018026 294 AVNVT 298 (362)
Q Consensus 294 ~I~V~ 298 (362)
.|.|.
T Consensus 107 ~i~V~ 111 (112)
T 1iby_A 107 TLNVV 111 (112)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99985
No 72
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=96.50 E-value=0.031 Score=53.43 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=29.9
Q ss_pred eEEcCCcccEEEEcCCCCCC-CCCCeEEEEeeCCCC
Q 018026 268 RITLGTAGEHYFFCTFPGHC-SAGQKLAVNVTGGSS 302 (362)
Q Consensus 268 ~v~l~~~G~~yFic~~~~HC-~~GmKl~I~V~~~~~ 302 (362)
.|+.+.+|.++|.|....|+ +.||...|+|.....
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 46678899999999998898 899999999986543
No 73
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=96.06 E-value=0.01 Score=55.83 Aligned_cols=78 Identities=8% Similarity=0.044 Sum_probs=47.4
Q ss_pred cCCceecCCEEEEEeCC-C----CceEEEEcccccCCC-C---CCCC-----CccCCCC--CceEEcCCcccEEEEcCCC
Q 018026 221 RNNNFSVGDILVFDYPA-R----VHDVVEVTKAAYDSC-N---SSST-----ISKSTNP--PTRITLGTAGEHYFFCTFP 284 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~-~----~hsV~~v~~~~y~~C-~---~~~~-----~~~~~~G--~~~v~l~~~G~~yFic~~~ 284 (362)
...+++.||+++|.+.+ + .|.+..- ...|+-- + ...+ +...... ...++.+.+|.+.|.|-+.
T Consensus 195 ~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlh-G~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~ 273 (288)
T 3gdc_A 195 FPVKVKQHELVRIHLINVLEYDPINSFHIH-GNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKT 273 (288)
T ss_dssp SCEEEETTCCEEEEEEECCCSSSEEEEEET-TCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSH
T ss_pred cccccCCCCEEEEEEEeCCCCCcceeEEEc-CCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecCh
Confidence 34688999999988843 2 2655431 1111100 0 0000 1111111 1235557899999999999
Q ss_pred CCCCCCCeEEEEeeC
Q 018026 285 GHCSAGQKLAVNVTG 299 (362)
Q Consensus 285 ~HC~~GmKl~I~V~~ 299 (362)
.|=++||...|+|.+
T Consensus 274 ~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 274 EFAELGWMGFFEVSA 288 (288)
T ss_dssp HHHTTTCEEEEEEEC
T ss_pred HHHhcCCCEEEEEeC
Confidence 999999999999864
No 74
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=95.88 E-value=0.0067 Score=51.76 Aligned_cols=76 Identities=18% Similarity=0.178 Sum_probs=48.0
Q ss_pred CceecCCEEEEE---eCC---------CCceEEEEcccccCCCCCCC-CCccC----CCCCce--------------EEc
Q 018026 223 NNFSVGDILVFD---YPA---------RVHDVVEVTKAAYDSCNSSS-TISKS----TNPPTR--------------ITL 271 (362)
Q Consensus 223 ~~f~vGD~LvF~---y~~---------~~hsV~~v~~~~y~~C~~~~-~~~~~----~~G~~~--------------v~l 271 (362)
..+++||.|-+- |.. ....+++|++++|+.|+... +...+ -.+..+ +..
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF 101 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF 101 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee
Confidence 467789999774 442 34578889999999998752 21110 011111 122
Q ss_pred CCcccEEEEcCC-----------CCCCCC-CCeEEEEee
Q 018026 272 GTAGEHYFFCTF-----------PGHCSA-GQKLAVNVT 298 (362)
Q Consensus 272 ~~~G~~yFic~~-----------~~HC~~-GmKl~I~V~ 298 (362)
..-..||||++- +|-|.. .|||.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 222368888774 467864 899999985
No 75
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=95.75 E-value=0.064 Score=51.26 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=47.8
Q ss_pred cCceeeeCCEEEEeecCC-----CccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeeccceEEEcCCCC-----CCCCC
Q 018026 48 ANQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPG-----HCLGG 117 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~-----~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~G~~yFic~~~~-----HC~~G 117 (362)
..++++.||+|++++.+. -|.+..-.....+.-.....+.-..+-...|+++.+|.+||.|...+ |=..|
T Consensus 64 P~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~G 143 (333)
T 1mzy_A 64 PLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSG 143 (333)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTT
T ss_pred CcEEecCCCEEEEEEEECCCCcccccceecCCCCCCCCCceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCC
Confidence 346889999999988764 36654311111110000011111111123566688999999998864 66789
Q ss_pred CeeeEEeecC
Q 018026 118 QKLAINVSAR 127 (362)
Q Consensus 118 mk~~I~V~~~ 127 (362)
|...|.|...
T Consensus 144 l~G~~iV~~~ 153 (333)
T 1mzy_A 144 MAGCIMVLPR 153 (333)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEccC
Confidence 9999998743
No 76
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=95.54 E-value=0.022 Score=48.40 Aligned_cols=76 Identities=21% Similarity=0.298 Sum_probs=47.5
Q ss_pred CceecCCEEEEE---eCC-------CCceEEEEcccccCCCCCCCCCc-c------CC-CCCceEEc-------------
Q 018026 223 NNFSVGDILVFD---YPA-------RVHDVVEVTKAAYDSCNSSSTIS-K------ST-NPPTRITL------------- 271 (362)
Q Consensus 223 ~~f~vGD~LvF~---y~~-------~~hsV~~v~~~~y~~C~~~~~~~-~------~~-~G~~~v~l------------- 271 (362)
+.+++||.|-+- |.. ....+++|++++|+.|+...... . .. .+..++++
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 467889999773 542 35677899999999998754211 1 11 12223222
Q ss_pred CCcc-cEEEEcCC-----CCCCCCCCeEEEEeeCCC
Q 018026 272 GTAG-EHYFFCTF-----PGHCSAGQKLAVNVTGGS 301 (362)
Q Consensus 272 ~~~G-~~yFic~~-----~~HC~~GmKl~I~V~~~~ 301 (362)
=++| .||||++- ++-| |||.|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 1245 67888653 3456 99999997654
No 77
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.37 E-value=0.16 Score=42.36 Aligned_cols=88 Identities=13% Similarity=0.146 Sum_probs=51.5
Q ss_pred EEEecCCCCCcCCCCCCCCCCccccCceeee-CCEEEEeecCCC--------ccEEEeCccccCC---------------
Q 018026 24 RHVVGDALGWIVPPNGPATYSNWAANQTFTV-GDTLVFNFAAGN--------HDVTRVTQSSFNA--------------- 79 (362)
Q Consensus 24 ~~~VGg~~GW~~~~~~~~~y~~Wa~~~~f~v-GD~L~F~~~~~~--------h~V~~V~~~~y~~--------------- 79 (362)
++.|-.+++..+.+ +.+++.. |++|.|.+.+.. |+++..+..+.+.
T Consensus 4 ~v~i~~~d~M~F~p----------~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~ 73 (125)
T 3fsa_A 4 SVDIQGNDQMQFNT----------NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYL 73 (125)
T ss_dssp EEEEEBCTTSCBSC----------SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEccCCcEEec----------CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccC
Confidence 34454444566543 5566654 999988887533 9998763322211
Q ss_pred -CCCCCCC---CcCCCCC-cEEEEe-----eccceEEEcCCCCCCCCCCeeeEEee
Q 018026 80 -CNTTSPL---SRTTNSP-ASVTLT-----ASGPHYFICSFPGHCLGGQKLAINVS 125 (362)
Q Consensus 80 -C~~~~~i---~~~~~G~-~~v~l~-----~~G~~yFic~~~~HC~~Gmk~~I~V~ 125 (362)
=+...-+ .....|. ..++++ ++|.|-|+|+ +|= |||..|.|.
T Consensus 74 ~~~d~~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 74 KPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp CTTCTTCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CCCCccceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 0001111 1122333 456666 4599999999 885 999999873
No 78
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.27 E-value=0.029 Score=47.28 Aligned_cols=67 Identities=18% Similarity=0.217 Sum_probs=45.3
Q ss_pred cCceeeeCCEEEEeecCC--CccEEEeCccccCCCCCCCCCCcCCCC---CcEEEEeeccceEEEcCCCCCCC---CCCe
Q 018026 48 ANQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPGHCL---GGQK 119 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~--~h~V~~V~~~~y~~C~~~~~i~~~~~G---~~~v~l~~~G~~yFic~~~~HC~---~Gmk 119 (362)
+..++.+||.|.|...+. .|++.. .....+ .....| ...++++++|.|+|+|+. +|. .+|+
T Consensus 60 ~~l~Vp~G~~V~~~vts~DV~Hsf~i-p~~~~k--------~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~ 128 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPDVIHGFHV-EGTNIN--------VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMF 128 (135)
T ss_dssp SSEEEETTSEEEEEEEBSSSCEEEEE-TTSSCE--------EEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCE
T ss_pred CEEEEcCCCEEEEEEEeCCccceEEe-cCCCce--------eEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCE
Confidence 578899999999998652 466542 111111 011122 246888999999999987 444 7999
Q ss_pred eeEEee
Q 018026 120 LAINVS 125 (362)
Q Consensus 120 ~~I~V~ 125 (362)
+.|.|.
T Consensus 129 g~v~V~ 134 (135)
T 2cua_A 129 GTIVVK 134 (135)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999885
No 79
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.27 E-value=0.029 Score=47.24 Aligned_cols=70 Identities=16% Similarity=0.243 Sum_probs=45.6
Q ss_pred cCCceecCCEEEEEeCCC--CceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCC---CCCeEEE
Q 018026 221 RNNNFSVGDILVFDYPAR--VHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCS---AGQKLAV 295 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~--~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~---~GmKl~I 295 (362)
+..++.+||.|.|...+. .|++.. ...+.+ -+ ..........++.+++|.|+|+|.. +|. .+|++.|
T Consensus 60 ~~l~Vp~G~~V~~~vts~DV~Hsf~i-p~~~~k-~d----~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~g~v 131 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPDVIHGFHV-EGTNIN-VE----VLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMFGTI 131 (135)
T ss_dssp SSEEEETTSEEEEEEEBSSSCEEEEE-TTSSCE-EE----ECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCEEEE
T ss_pred CEEEEcCCCEEEEEEEeCCccceEEe-cCCCce-eE----eCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCEEEE
Confidence 568899999999998543 466642 111110 00 0001112346888999999999987 454 6899999
Q ss_pred Eee
Q 018026 296 NVT 298 (362)
Q Consensus 296 ~V~ 298 (362)
.|.
T Consensus 132 ~V~ 134 (135)
T 2cua_A 132 VVK 134 (135)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 80
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=95.23 E-value=0.026 Score=49.77 Aligned_cols=77 Identities=22% Similarity=0.298 Sum_probs=48.4
Q ss_pred CceecCCEEEEE---eCC-------CCceEEEEcccccCCCCCCCCCc-c------C-CCCCceEEc-------------
Q 018026 223 NNFSVGDILVFD---YPA-------RVHDVVEVTKAAYDSCNSSSTIS-K------S-TNPPTRITL------------- 271 (362)
Q Consensus 223 ~~f~vGD~LvF~---y~~-------~~hsV~~v~~~~y~~C~~~~~~~-~------~-~~G~~~v~l------------- 271 (362)
+.+++||.|-+- |+. ....+++|++++|+.|+..+... . . ..+..++++
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 467899999773 542 35677899999999998754221 1 1 112323222
Q ss_pred CCcc-cEEEEcCC-----CCCCCCCCeEEEEeeCCCC
Q 018026 272 GTAG-EHYFFCTF-----PGHCSAGQKLAVNVTGGSS 302 (362)
Q Consensus 272 ~~~G-~~yFic~~-----~~HC~~GmKl~I~V~~~~~ 302 (362)
=++| .||||++- ++-| |||.|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 1345 67888653 2446 999999987654
No 81
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=95.17 E-value=0.022 Score=50.47 Aligned_cols=77 Identities=19% Similarity=0.342 Sum_probs=46.7
Q ss_pred CceecCCEEEEE---eCC--------CCceEEEEcccccCCCCCCC-CCc------cCC-CCCceEEc------------
Q 018026 223 NNFSVGDILVFD---YPA--------RVHDVVEVTKAAYDSCNSSS-TIS------KST-NPPTRITL------------ 271 (362)
Q Consensus 223 ~~f~vGD~LvF~---y~~--------~~hsV~~v~~~~y~~C~~~~-~~~------~~~-~G~~~v~l------------ 271 (362)
+.+++||.|-+- |+. ....+++|++++|+.|+... ... ... .|..+|++
T Consensus 50 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~Gl 129 (182)
T 3czu_B 50 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 129 (182)
T ss_dssp EEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCCe
Confidence 467899999774 532 23577899999999998754 111 111 12222211
Q ss_pred -CCcc-cEEEEcC----CCCCCCCCCeEEEEeeCCCC
Q 018026 272 -GTAG-EHYFFCT----FPGHCSAGQKLAVNVTGGSS 302 (362)
Q Consensus 272 -~~~G-~~yFic~----~~~HC~~GmKl~I~V~~~~~ 302 (362)
=++| .||||++ .+|.| |||.|.|.....
T Consensus 130 EF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 130 EFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp CCCTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred eEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 0334 6888876 35667 999999986553
No 82
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.15 E-value=0.084 Score=44.00 Aligned_cols=74 Identities=18% Similarity=0.219 Sum_probs=43.5
Q ss_pred cCCceec-CCEEEEEeCC-C-------CceEEEEccc----------------ccCCCCCCCCC---ccCCCCC-ceEEc
Q 018026 221 RNNNFSV-GDILVFDYPA-R-------VHDVVEVTKA----------------AYDSCNSSSTI---SKSTNPP-TRITL 271 (362)
Q Consensus 221 ~~~~f~v-GD~LvF~y~~-~-------~hsV~~v~~~----------------~y~~C~~~~~~---~~~~~G~-~~v~l 271 (362)
+.+++.. |++|.|.+.+ + .|+++..+.. +|-.=+..+-+ .....|. ..+++
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf 97 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTF 97 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEE
Confidence 5566654 9999888853 3 3999986432 22111111111 1123343 33444
Q ss_pred C-----CcccEEEEcCCCCCCCCCCeEEEEee
Q 018026 272 G-----TAGEHYFFCTFPGHCSAGQKLAVNVT 298 (362)
Q Consensus 272 ~-----~~G~~yFic~~~~HC~~GmKl~I~V~ 298 (362)
+ ++|.|-|+|+ +|= |||..|.|.
T Consensus 98 ~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 98 DVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred eCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 3 6699999999 886 999999883
No 83
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=94.98 E-value=0.015 Score=51.33 Aligned_cols=77 Identities=21% Similarity=0.323 Sum_probs=49.1
Q ss_pred CceeeeCCEEEE---eecC-------CCccEEEeCccccCCCCCCCCCCc-------C-CCCCcEEEEe-----------
Q 018026 49 NQTFTVGDTLVF---NFAA-------GNHDVTRVTQSSFNACNTTSPLSR-------T-TNSPASVTLT----------- 99 (362)
Q Consensus 49 ~~~f~vGD~L~F---~~~~-------~~h~V~~V~~~~y~~C~~~~~i~~-------~-~~G~~~v~l~----------- 99 (362)
...+++||.|-+ +|.. ....++.|++++|++|+.....+. . ..++..|++.
T Consensus 51 ~i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~ 130 (177)
T 2x11_B 51 HIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGF 130 (177)
T ss_dssp EEEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCC
T ss_pred eEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCc
Confidence 356889999976 5653 245567999999999987543211 0 1134344431
Q ss_pred --ecc-ceEEEcCC-----CCCCCCCCeeeEEeecCC
Q 018026 100 --ASG-PHYFICSF-----PGHCLGGQKLAINVSARG 128 (362)
Q Consensus 100 --~~G-~~yFic~~-----~~HC~~Gmk~~I~V~~~~ 128 (362)
++| .||||++- ++-| |||.|.|....
T Consensus 131 EF~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~ 164 (177)
T 2x11_B 131 EFRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 164 (177)
T ss_dssp CCCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTT
T ss_pred cccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCC
Confidence 345 67888642 2346 99999998654
No 84
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=94.41 E-value=0.026 Score=48.05 Aligned_cols=76 Identities=20% Similarity=0.250 Sum_probs=47.3
Q ss_pred CceecCCEEEEE---eCC------CCceEEEEcccccCCCCCCC-CCccC----CCCCceEEcC-------------Ccc
Q 018026 223 NNFSVGDILVFD---YPA------RVHDVVEVTKAAYDSCNSSS-TISKS----TNPPTRITLG-------------TAG 275 (362)
Q Consensus 223 ~~f~vGD~LvF~---y~~------~~hsV~~v~~~~y~~C~~~~-~~~~~----~~G~~~v~l~-------------~~G 275 (362)
...++||.|-|- |+. ....+++|++++|+.|+... ....+ -.+...+++. ++|
T Consensus 23 v~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g 102 (140)
T 2vsm_B 23 LYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKN 102 (140)
T ss_dssp ECCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTT
T ss_pred EEecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCC
Confidence 345689999884 432 24678889999999998763 21111 1122222211 334
Q ss_pred -cEEEEcCC-----------CCCCC-CCCeEEEEee
Q 018026 276 -EHYFFCTF-----------PGHCS-AGQKLAVNVT 298 (362)
Q Consensus 276 -~~yFic~~-----------~~HC~-~GmKl~I~V~ 298 (362)
.||||++- +|-|. ..|||.|.|.
T Consensus 103 ~~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~ 138 (140)
T 2vsm_B 103 KDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVG 138 (140)
T ss_dssp EEEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEET
T ss_pred CceEEEecCCCCccccccccCCccccceEEEEEEec
Confidence 67888774 35796 4899999985
No 85
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=94.28 E-value=0.33 Score=45.15 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=48.7
Q ss_pred cCCceecCCEEEEEeCC---CCceEEEEcccccCC---CCCCCC---------CccCCCCC--ceEEcC---CcccEEEE
Q 018026 221 RNNNFSVGDILVFDYPA---RVHDVVEVTKAAYDS---CNSSST---------ISKSTNPP--TRITLG---TAGEHYFF 280 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~---~~hsV~~v~~~~y~~---C~~~~~---------~~~~~~G~--~~v~l~---~~G~~yFi 280 (362)
...+++.||+++|.+.+ ..|.+..- ...|.- -....+ +....... ..+..+ .+|.++|-
T Consensus 168 p~i~v~~G~~vri~l~N~~~~~Hp~HlH-G~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~H 246 (276)
T 3kw8_A 168 PDFEATVGDRVEIVMITHGEYYHTFHMH-GHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 246 (276)
T ss_dssp CCEEEETTCEEEEEEEEESSCCEEEEET-TCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred CCEEEecCCEEEEEEecCCCcceeEEEc-cceeEEeccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEE
Confidence 44689999999887742 35666541 111110 000000 01111111 234444 58999999
Q ss_pred cCCCCCCCCCCeEEEEeeCCCC
Q 018026 281 CTFPGHCSAGQKLAVNVTGGSS 302 (362)
Q Consensus 281 c~~~~HC~~GmKl~I~V~~~~~ 302 (362)
|-...|=+.||...+.|.....
T Consensus 247 CH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 247 CHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999987653
No 86
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=94.17 E-value=0.05 Score=48.11 Aligned_cols=76 Identities=16% Similarity=0.355 Sum_probs=47.4
Q ss_pred CceeeeCCEEEE---eecCC--------CccEEEeCccccCCCCCCCCCC--------cCCCCCcEEEEe----------
Q 018026 49 NQTFTVGDTLVF---NFAAG--------NHDVTRVTQSSFNACNTTSPLS--------RTTNSPASVTLT---------- 99 (362)
Q Consensus 49 ~~~f~vGD~L~F---~~~~~--------~h~V~~V~~~~y~~C~~~~~i~--------~~~~G~~~v~l~---------- 99 (362)
.+.+++||.|-+ +|..+ ...++.|++++|++|+.....+ ....|+..|++.
T Consensus 49 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~G 128 (182)
T 3czu_B 49 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLG 128 (182)
T ss_dssp EEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTS
T ss_pred eEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCC
Confidence 457889999976 56532 2567799999999998654111 111223333331
Q ss_pred ---ecc-ceEEEcC----CCCCCCCCCeeeEEeecC
Q 018026 100 ---ASG-PHYFICS----FPGHCLGGQKLAINVSAR 127 (362)
Q Consensus 100 ---~~G-~~yFic~----~~~HC~~Gmk~~I~V~~~ 127 (362)
++| .||||+. .++.| |||.|.|...
T Consensus 129 lEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k 161 (182)
T 3czu_B 129 KEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGK 161 (182)
T ss_dssp CCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC-
T ss_pred eeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecC
Confidence 344 6888875 35677 8999999744
No 87
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=93.63 E-value=2.1 Score=40.43 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=27.6
Q ss_pred CcccEEEEcCCCCCCCCCCeEEEEeeCCCCC
Q 018026 273 TAGEHYFFCTFPGHCSAGQKLAVNVTGGSST 303 (362)
Q Consensus 273 ~~G~~yFic~~~~HC~~GmKl~I~V~~~~~~ 303 (362)
.+|.+.|-|-+..|=.+||...++|......
T Consensus 245 nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 245 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTCC
T ss_pred CCEeEEEEeCChHHHHCCCeEEEEEECCCCC
Confidence 5799999999999999999999999887654
No 88
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=93.60 E-value=0.053 Score=46.01 Aligned_cols=76 Identities=21% Similarity=0.333 Sum_probs=48.2
Q ss_pred CceeeeCCEEEE---eecC-------CCccEEEeCccccCCCCCCCCCCc--------CCCCCcEEEEe-----------
Q 018026 49 NQTFTVGDTLVF---NFAA-------GNHDVTRVTQSSFNACNTTSPLSR--------TTNSPASVTLT----------- 99 (362)
Q Consensus 49 ~~~f~vGD~L~F---~~~~-------~~h~V~~V~~~~y~~C~~~~~i~~--------~~~G~~~v~l~----------- 99 (362)
.+.+++||.|-+ +|.. ....++.|++++|++|+....... ...++..|++.
T Consensus 22 ~i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~ 101 (138)
T 1shx_A 22 HIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGF 101 (138)
T ss_dssp EEEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCC
T ss_pred eEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCce
Confidence 356889999976 5553 245567999999999987542211 01134344431
Q ss_pred --ecc-ceEEEcCC-----CCCCCCCCeeeEEeecC
Q 018026 100 --ASG-PHYFICSF-----PGHCLGGQKLAINVSAR 127 (362)
Q Consensus 100 --~~G-~~yFic~~-----~~HC~~Gmk~~I~V~~~ 127 (362)
++| .||||++- ++-| |||.|.|...
T Consensus 102 EF~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~ 134 (138)
T 1shx_A 102 EFRPGREYFYISSAIPDNGRRSC---LKLKVFVRPT 134 (138)
T ss_dssp CCCTTEEEEEEEEESSCCSCSCC---CEEEEEECCT
T ss_pred eecCCCeEEEEEcCCCCCCCCce---eEEEEEEEcc
Confidence 245 67888642 3457 9999999754
No 89
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=93.57 E-value=0.039 Score=46.95 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=48.5
Q ss_pred ceeeeCCEEEE---eecC---------CCccEEEeCccccCCCCCCCCCC-c----CCCCCcEEEEe-------------
Q 018026 50 QTFTVGDTLVF---NFAA---------GNHDVTRVTQSSFNACNTTSPLS-R----TTNSPASVTLT------------- 99 (362)
Q Consensus 50 ~~f~vGD~L~F---~~~~---------~~h~V~~V~~~~y~~C~~~~~i~-~----~~~G~~~v~l~------------- 99 (362)
..+++||.|-+ +|.. ....++.|++++|++|+....-+ . .-.++..|++.
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF 101 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF 101 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee
Confidence 46788999976 4553 23567889999999998753111 0 01122233321
Q ss_pred ecc-ceEEEcCC-----------CCCCCC-CCeeeEEee
Q 018026 100 ASG-PHYFICSF-----------PGHCLG-GQKLAINVS 125 (362)
Q Consensus 100 ~~G-~~yFic~~-----------~~HC~~-Gmk~~I~V~ 125 (362)
++| .||||+.- +|-|.. .|||.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 234 68888764 356876 899999986
No 90
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=92.71 E-value=0.068 Score=52.96 Aligned_cols=77 Identities=22% Similarity=0.333 Sum_probs=52.0
Q ss_pred cCCceecCCEEEEEeCCC---CceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCCCCeEEEEe
Q 018026 221 RNNNFSVGDILVFDYPAR---VHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAGQKLAVNV 297 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~---~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~I~V 297 (362)
...+++.||+|+|++.+. .|++..-.......|.. ....+-..+|+++++|.+||.|...+|=..||+..|.|
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~i----~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V 130 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIVN----GKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQV 130 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCBC----STTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCcccceec----CCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEE
Confidence 557899999999988432 37764322222223321 11112223566788999999999989988899999999
Q ss_pred eCCC
Q 018026 298 TGGS 301 (362)
Q Consensus 298 ~~~~ 301 (362)
....
T Consensus 131 ~~~~ 134 (447)
T 2dv6_A 131 LPGN 134 (447)
T ss_dssp ESSC
T ss_pred eCCc
Confidence 8654
No 91
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=92.53 E-value=0.2 Score=47.33 Aligned_cols=79 Identities=13% Similarity=0.238 Sum_probs=32.7
Q ss_pred CCceecCCEEEEEeCCC-Cc-eEEEE--cccccCC-CCCCCCCcc--CCCCCceEEcCCcccEEEEcCCCCCCCCCCeEE
Q 018026 222 NNNFSVGDILVFDYPAR-VH-DVVEV--TKAAYDS-CNSSSTISK--STNPPTRITLGTAGEHYFFCTFPGHCSAGQKLA 294 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~-~h-sV~~v--~~~~y~~-C~~~~~~~~--~~~G~~~v~l~~~G~~yFic~~~~HC~~GmKl~ 294 (362)
..+++.||+++|.+-+. .. ..+.+ ....|+. -...+.+.. ...-...|+.+.+|.++|.|-...|..+||...
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~ 295 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQNHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAY 295 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEETTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeeeCCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEE
Confidence 46788899999887443 11 22211 1112221 000111111 112223466678999999999999999999999
Q ss_pred EEeeCC
Q 018026 295 VNVTGG 300 (362)
Q Consensus 295 I~V~~~ 300 (362)
++|...
T Consensus 296 ~~V~~~ 301 (306)
T 1sdd_A 296 IDIKNC 301 (306)
T ss_dssp C-----
T ss_pred EEEecC
Confidence 998753
No 92
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=92.45 E-value=0.22 Score=43.03 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=26.1
Q ss_pred CceecCCEEEEE---eCC--------CCceEEEEcccccCCCCCCC
Q 018026 223 NNFSVGDILVFD---YPA--------RVHDVVEVTKAAYDSCNSSS 257 (362)
Q Consensus 223 ~~f~vGD~LvF~---y~~--------~~hsV~~v~~~~y~~C~~~~ 257 (362)
+.+++||.|-+- |.. ....+++|++++|+.|+...
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 77 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQ 77 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTT
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCC
Confidence 467899999874 432 23357899999999998754
No 93
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=91.61 E-value=0.36 Score=46.48 Aligned_cols=81 Identities=14% Similarity=0.099 Sum_probs=48.9
Q ss_pred cCCceecCCEEEEEeCC---CCceEEEEcccccCCC-C--CCCCC------c--cCCCC-Cc--eEEc---CCcccEEEE
Q 018026 221 RNNNFSVGDILVFDYPA---RVHDVVEVTKAAYDSC-N--SSSTI------S--KSTNP-PT--RITL---GTAGEHYFF 280 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~---~~hsV~~v~~~~y~~C-~--~~~~~------~--~~~~G-~~--~v~l---~~~G~~yFi 280 (362)
...+++.||+++|.+.+ ..|.+..-. ..|.-- + ...+. . ....| .. .|+. +.+|.++|-
T Consensus 209 ~~l~v~~Ge~vri~l~N~g~~~HpfHlHG-h~f~v~~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~H 287 (343)
T 3cg8_A 209 PDFEATVGDRVEIVMITHGEYYHTFHMHG-HRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 287 (343)
T ss_dssp CCEEEETTCEEEEEEEEESSCCEEEEETT-CCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred ccEEeCCCCEEEEEEEcCCccccccEecC-cEEEEeccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEe
Confidence 34689999999987742 356665411 111100 0 00000 0 01112 22 3442 578999999
Q ss_pred cCCCCCCCCCCeEEEEeeCCCC
Q 018026 281 CTFPGHCSAGQKLAVNVTGGSS 302 (362)
Q Consensus 281 c~~~~HC~~GmKl~I~V~~~~~ 302 (362)
|-+..|=+.||...+.|.....
T Consensus 288 CHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 288 CHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCHHHHhccCcEEEEEecCCC
Confidence 9999999999999999987654
No 94
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.53 E-value=0.15 Score=52.94 Aligned_cols=71 Identities=14% Similarity=0.194 Sum_probs=45.7
Q ss_pred cCceeeeCCEEEEeecCC------CccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeeccceEEEcCC---CCCCCCCC
Q 018026 48 ANQTFTVGDTLVFNFAAG------NHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSF---PGHCLGGQ 118 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~------~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~G~~yFic~~---~~HC~~Gm 118 (362)
...++.+||+|.|.+.+. .|++.. .....+ +. +.-..+....|+++++|.|||+|.. ..| .||
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~i-p~~gv~-~~----i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~gM 584 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTM-GNYGVA-ME----IGPQMTSSVTFVAANPGVYWYYCQWFCHALH--MEM 584 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEE-TTTTEE-EE----ECTTCEEEEEEECCSCEEEEEECCSCCSTTC--TTC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEe-cCCCcc-ee----eCCCCeEEEEEECCCCEEEEEECCCCCCCCc--cCC
Confidence 567899999999997652 466643 111111 11 0001112246778899999999984 356 499
Q ss_pred eeeEEeec
Q 018026 119 KLAINVSA 126 (362)
Q Consensus 119 k~~I~V~~ 126 (362)
+..|.|..
T Consensus 585 ~G~IiV~p 592 (595)
T 1fwx_A 585 RGRMLVEP 592 (595)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEc
Confidence 99999974
No 95
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.50 E-value=0.14 Score=53.32 Aligned_cols=72 Identities=11% Similarity=0.152 Sum_probs=46.4
Q ss_pred cCCceecCCEEEEEeCCC------CceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcccEEEEcCC---CCCCCCCC
Q 018026 221 RNNNFSVGDILVFDYPAR------VHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTF---PGHCSAGQ 291 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~------~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~---~~HC~~Gm 291 (362)
...++++||.|.|.+.+. .|++..-+ ...+ +. +....+...+|+.+++|.|||+|.. ..| .||
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv~-~~----i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~gM 584 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGVA-ME----IGPQMTSSVTFVAANPGVYWYYCQWFCHALH--MEM 584 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTEE-EE----ECTTCEEEEEEECCSCEEEEEECCSCCSTTC--TTC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecC-CCcc-ee----eCCCCeEEEEEECCCCEEEEEECCCCCCCCc--cCC
Confidence 457889999999997542 47764321 1111 11 1111122346788999999999994 345 499
Q ss_pred eEEEEeeCC
Q 018026 292 KLAVNVTGG 300 (362)
Q Consensus 292 Kl~I~V~~~ 300 (362)
+..|.|...
T Consensus 585 ~G~IiV~p~ 593 (595)
T 1fwx_A 585 RGRMLVEPK 593 (595)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEcC
Confidence 999999764
No 96
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=91.43 E-value=2.5 Score=39.65 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=27.8
Q ss_pred CCcccEEEEcCCCCCCCCCCeEEEEeeCCCCC
Q 018026 272 GTAGEHYFFCTFPGHCSAGQKLAVNVTGGSST 303 (362)
Q Consensus 272 ~~~G~~yFic~~~~HC~~GmKl~I~V~~~~~~ 303 (362)
+.+|.+.|-|-+..|=++||...++|......
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~ 291 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADGT 291 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCCC
Confidence 45799999999999999999999999876643
No 97
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=91.43 E-value=0.41 Score=41.73 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=42.8
Q ss_pred cCceeeeCCEEEEeecCC--CccEEEeCccccCCCCCCCCCCcCCCC---CcEEEEeeccceEEEcCC-CCCCCCCCeee
Q 018026 48 ANQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSF-PGHCLGGQKLA 121 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~--~h~V~~V~~~~y~~C~~~~~i~~~~~G---~~~v~l~~~G~~yFic~~-~~HC~~Gmk~~ 121 (362)
+...+.+|+.+.|...+. .|+... ..-..+ .....| ...++.+++|.||++|+. -|+--.+|++.
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~I-P~lgik--------~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~ 163 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHV-EGTNIN--------VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGT 163 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEE-TTSSCE--------EEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEE-CCCCeE--------EEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEE
Confidence 456788899999987753 344432 111110 011122 246778999999999996 23333569999
Q ss_pred EEee
Q 018026 122 INVS 125 (362)
Q Consensus 122 I~V~ 125 (362)
|.|.
T Consensus 164 V~V~ 167 (168)
T 3s8f_B 164 IVVK 167 (168)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9986
No 98
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=91.31 E-value=0.18 Score=42.80 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=48.5
Q ss_pred ceeeeCCEEEE---eecCC------CccEEEeCccccCCCCCCC-CCCcC----CCCCcEEEEe-------------ecc
Q 018026 50 QTFTVGDTLVF---NFAAG------NHDVTRVTQSSFNACNTTS-PLSRT----TNSPASVTLT-------------ASG 102 (362)
Q Consensus 50 ~~f~vGD~L~F---~~~~~------~h~V~~V~~~~y~~C~~~~-~i~~~----~~G~~~v~l~-------------~~G 102 (362)
...++||.|-| +|..+ ...++.|++.+|+.|+... ....+ -.+...+++. ++|
T Consensus 23 v~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g 102 (140)
T 2vsm_B 23 LYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKN 102 (140)
T ss_dssp ECCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTT
T ss_pred EEecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCC
Confidence 34567999977 45432 4667889999999998753 21111 1233334332 344
Q ss_pred -ceEEEcCCC-----------CCCCC-CCeeeEEeec
Q 018026 103 -PHYFICSFP-----------GHCLG-GQKLAINVSA 126 (362)
Q Consensus 103 -~~yFic~~~-----------~HC~~-Gmk~~I~V~~ 126 (362)
.||||+.-. |-|.. .|||.|.|..
T Consensus 103 ~~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 103 KDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred CceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 678887642 46776 8999999964
No 99
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=90.87 E-value=0.17 Score=43.82 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=26.6
Q ss_pred CceeeeCCEEEE---eecCC--------CccEEEeCccccCCCCCCC
Q 018026 49 NQTFTVGDTLVF---NFAAG--------NHDVTRVTQSSFNACNTTS 84 (362)
Q Consensus 49 ~~~f~vGD~L~F---~~~~~--------~h~V~~V~~~~y~~C~~~~ 84 (362)
.+.+++||.|-+ +|..+ ...++.|++++|++|+...
T Consensus 31 ~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 77 (157)
T 2wo3_B 31 TVEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQ 77 (157)
T ss_dssp EEEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTT
T ss_pred EEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCC
Confidence 456889999977 55432 2347799999999998754
No 100
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.48 E-value=0.19 Score=52.12 Aligned_cols=71 Identities=18% Similarity=0.308 Sum_probs=46.4
Q ss_pred cCCceecCCEEEEEeCCC------CceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCCC---C
Q 018026 221 RNNNFSVGDILVFDYPAR------VHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAG---Q 291 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~------~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~G---m 291 (362)
+..++.+||.|.|...+. .|++..-+ ...+ -+ +.........++.+++|.|||+|+. +|..+ |
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPs-lGIK-~D----aiPGrtnsvtFtadkPGvY~y~CSE--~CGa~Hs~M 629 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVN-HGVS-ME----ISPQQTSSITFVADKPGLHWYYCSW--FCHALHMEM 629 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTEE-EE----ECTTCEEEEEEECCSCEEEEEECCS--CCSTTCTTC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecC-CCce-ee----eCCCCeEEEEEEcCCCEEEEEECCC--cCCCCcccc
Confidence 568899999999987552 57764311 1100 00 0011122345788999999999997 67654 9
Q ss_pred eEEEEeeC
Q 018026 292 KLAVNVTG 299 (362)
Q Consensus 292 Kl~I~V~~ 299 (362)
+..|.|.+
T Consensus 630 ~G~ViVEP 637 (638)
T 3sbq_A 630 VGRMMVEP 637 (638)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEec
Confidence 99999974
No 101
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.85 E-value=0.28 Score=50.82 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=45.9
Q ss_pred cCceeeeCCEEEEeecCC------CccEEEeCccccCCCCCCCCCCcCCCC---CcEEEEeeccceEEEcCCCCCCCCC-
Q 018026 48 ANQTFTVGDTLVFNFAAG------NHDVTRVTQSSFNACNTTSPLSRTTNS---PASVTLTASGPHYFICSFPGHCLGG- 117 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~------~h~V~~V~~~~y~~C~~~~~i~~~~~G---~~~v~l~~~G~~yFic~~~~HC~~G- 117 (362)
+..++.+||.|.|...+. .|++..-. ...+ ....-| ...|+.+++|.|||+|+. +|..+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPs-lGIK--------~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~H 626 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVN-HGVS--------MEISPQQTSSITFVADKPGLHWYYCSW--FCHALH 626 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTEE--------EEECTTCEEEEEEECCSCEEEEEECCS--CCSTTC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecC-CCce--------eeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCc
Confidence 578899999999987752 46664311 1100 011222 245777899999999997 66665
Q ss_pred --CeeeEEeec
Q 018026 118 --QKLAINVSA 126 (362)
Q Consensus 118 --mk~~I~V~~ 126 (362)
|+..|.|..
T Consensus 627 s~M~G~ViVEP 637 (638)
T 3sbq_A 627 MEMVGRMMVEP 637 (638)
T ss_dssp TTCEEEEEEEC
T ss_pred ccceEEEEEec
Confidence 999999863
No 102
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=89.62 E-value=0.53 Score=41.04 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=44.9
Q ss_pred cCCceecCCEEEEEeCCC--CceEEEEcccccC-CCCCCCCCccCCCCCceEEcCCcccEEEEcCC-CCCCCCCCeEEEE
Q 018026 221 RNNNFSVGDILVFDYPAR--VHDVVEVTKAAYD-SCNSSSTISKSTNPPTRITLGTAGEHYFFCTF-PGHCSAGQKLAVN 296 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~--~hsV~~v~~~~y~-~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~-~~HC~~GmKl~I~ 296 (362)
+...+.+|+.+.|...+. .|+... .++. .-+. .........++.+++|.||++|+. -|+-..+|++.|.
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~I---P~lgik~da----~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~V~ 165 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHV---EGTNINVEV----LPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGTIV 165 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEE---TTSSCEEEE----CTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEEEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEE---CCCCeEEEe----cCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEEEE
Confidence 568899999999998653 355533 1111 0000 001112345788999999999996 2333356999999
Q ss_pred ee
Q 018026 297 VT 298 (362)
Q Consensus 297 V~ 298 (362)
|.
T Consensus 166 V~ 167 (168)
T 3s8f_B 166 VK 167 (168)
T ss_dssp EE
T ss_pred Ee
Confidence 86
No 103
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=89.61 E-value=0.59 Score=44.44 Aligned_cols=34 Identities=9% Similarity=0.123 Sum_probs=27.3
Q ss_pred eEEcCCcccEEEEcCCCCCCC------CCCeEEEEeeCCC
Q 018026 268 RITLGTAGEHYFFCTFPGHCS------AGQKLAVNVTGGS 301 (362)
Q Consensus 268 ~v~l~~~G~~yFic~~~~HC~------~GmKl~I~V~~~~ 301 (362)
.+..+.+|.+.|-|-+..|-. .||...|.+....
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 456688999999999999998 4677778886544
No 104
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=86.10 E-value=0.91 Score=38.06 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=26.2
Q ss_pred CceecCCEEEE---EeCC--------CCceEEEEcccccCCCCCCC
Q 018026 223 NNFSVGDILVF---DYPA--------RVHDVVEVTKAAYDSCNSSS 257 (362)
Q Consensus 223 ~~f~vGD~LvF---~y~~--------~~hsV~~v~~~~y~~C~~~~ 257 (362)
..+++||.|-+ +|+. ....++.|++++|+.|+...
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 46789999977 4432 23567789999999999754
No 105
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=84.52 E-value=0.73 Score=49.27 Aligned_cols=76 Identities=11% Similarity=0.044 Sum_probs=47.3
Q ss_pred CCceecCCEEEEEeCCC-----CceEEEEcccccCCCC----CCCCCccCCCCCc--eEEcCCcccEEEEcCCCCCCCCC
Q 018026 222 NNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCN----SSSTISKSTNPPT--RITLGTAGEHYFFCTFPGHCSAG 290 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~-----~hsV~~v~~~~y~~C~----~~~~~~~~~~G~~--~v~l~~~G~~yFic~~~~HC~~G 290 (362)
..+++.||.+++.+.+. .|.+.. -...|.--. ..+.+...-.+.. .|..+.+|.+.|.|-...|...|
T Consensus 369 ~l~v~~Ge~vr~rliN~g~~~~~H~fHl-hGh~f~Vv~~dg~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~G 447 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGSNENIHSIHF-SGHVFTVRKKEEYKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLHAG 447 (770)
T ss_dssp CCCCCSSSCEEEECCCCCSSSCCCEEEB-SSCCEECCSSSCCEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTB
T ss_pred CeEEeCCCEEEEEEEeCCCCcceEEEEE-cCCEEEEEecCCceeeEEEECCCeEEEEEEEeCCCCceEEEeccccccccc
Confidence 47899999999988542 355543 111222110 0111122222223 34557889999999999999999
Q ss_pred CeEEEEee
Q 018026 291 QKLAVNVT 298 (362)
Q Consensus 291 mKl~I~V~ 298 (362)
|...+.|.
T Consensus 448 M~~~~~V~ 455 (770)
T 2r7e_B 448 MSTLFLVY 455 (770)
T ss_dssp CCCCCCBC
T ss_pred cccccccc
Confidence 99998884
No 106
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=83.07 E-value=0.9 Score=38.10 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=26.8
Q ss_pred CceeeeCCEEEE---eecCC--------CccEEEeCccccCCCCCCC
Q 018026 49 NQTFTVGDTLVF---NFAAG--------NHDVTRVTQSSFNACNTTS 84 (362)
Q Consensus 49 ~~~f~vGD~L~F---~~~~~--------~h~V~~V~~~~y~~C~~~~ 84 (362)
...+++||.|-+ +|+.+ ...+..|++++|++|+...
T Consensus 21 ~v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 21 TIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred eEEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 356789999966 56543 2456789999999998654
No 107
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=79.53 E-value=1.1 Score=42.46 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=28.3
Q ss_pred eEEcCCcccEEEEcCCCCCC-CCCCeEEEEeeCCC
Q 018026 268 RITLGTAGEHYFFCTFPGHC-SAGQKLAVNVTGGS 301 (362)
Q Consensus 268 ~v~l~~~G~~yFic~~~~HC-~~GmKl~I~V~~~~ 301 (362)
.|+.+.+|.+||.|....|| ..||...|.|....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 45667899999999999998 78998888887543
No 108
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=78.88 E-value=1.2 Score=42.18 Aligned_cols=77 Identities=14% Similarity=0.111 Sum_probs=48.2
Q ss_pred CCceecCCEEEEEeCCC-----CceEEEEcccccCCCCCCCCCccCCCC---CceEEcCCcccEEEEcCCCC-----CCC
Q 018026 222 NNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNP---PTRITLGTAGEHYFFCTFPG-----HCS 288 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~-----~hsV~~v~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~-----HC~ 288 (362)
.++++.||+|++++.+. -|.+..-.....+.-. .+.....| ...|+++++|.+||.|-..+ |=.
T Consensus 65 ~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~---~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 141 (333)
T 1mzy_A 65 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGG---GLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVV 141 (333)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGG---GGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHH
T ss_pred cEEecCCCEEEEEEEECCCCcccccceecCCCCCCCCC---ceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhh
Confidence 46789999999988543 3665432111111000 11112223 24577789999999998864 667
Q ss_pred CCCeEEEEeeCCC
Q 018026 289 AGQKLAVNVTGGS 301 (362)
Q Consensus 289 ~GmKl~I~V~~~~ 301 (362)
.||...|.|....
T Consensus 142 ~Gl~G~~iV~~~~ 154 (333)
T 1mzy_A 142 SGMAGCIMVLPRD 154 (333)
T ss_dssp TTCEEEEEEECTT
T ss_pred CCCEEEEEEccCc
Confidence 8999999997543
No 109
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=77.78 E-value=1.4 Score=41.84 Aligned_cols=77 Identities=14% Similarity=0.168 Sum_probs=47.5
Q ss_pred CCceecCCEEEEEeCCC-----CceEEEEcccccCCCCCCCCCccCCCC---CceEEcCCcccEEEEcCCCC----CCCC
Q 018026 222 NNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNP---PTRITLGTAGEHYFFCTFPG----HCSA 289 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~-----~hsV~~v~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~----HC~~ 289 (362)
.++++.||+|++++.+. .|.+..-.....+. ...+.....| ...++++.+|.+||.|...+ |=..
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~~---~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 142 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALG---GAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVS 142 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCCCCCC---CcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhC
Confidence 46788999999988543 46664321110000 0111112223 23577789999999999754 4568
Q ss_pred CCeEEEEeeCCC
Q 018026 290 GQKLAVNVTGGS 301 (362)
Q Consensus 290 GmKl~I~V~~~~ 301 (362)
||...|.|....
T Consensus 143 Gl~G~liV~~~~ 154 (336)
T 1oe1_A 143 GMSGTLMVLPRD 154 (336)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEecCc
Confidence 999999997644
No 110
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=75.91 E-value=1.3 Score=42.17 Aligned_cols=78 Identities=13% Similarity=0.124 Sum_probs=46.7
Q ss_pred cCCceecCCEEEEEeCCC-----CceEEEEcccccCCCCCCCCCccCCCC---CceEEcCCcccEEEEcCC---CCCCCC
Q 018026 221 RNNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNP---PTRITLGTAGEHYFFCTF---PGHCSA 289 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~-----~hsV~~v~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~---~~HC~~ 289 (362)
..++++.||+|++++.+. .|++..=--...|. ... ......| ...++++.+|.+||-|.. ..|-..
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG-~~~--~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~ 146 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG-GAA--ATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIAN 146 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG-GTT--TTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC-CCc--ceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhc
Confidence 346889999999988543 46654310001110 000 0112223 235677899999999976 245568
Q ss_pred CCeEEEEeeCCC
Q 018026 290 GQKLAVNVTGGS 301 (362)
Q Consensus 290 GmKl~I~V~~~~ 301 (362)
||...|.|....
T Consensus 147 Gl~G~~iV~~~~ 158 (327)
T 1kbv_A 147 GMYGLILVEPKE 158 (327)
T ss_dssp TCEEEEEEECTT
T ss_pred ceEEEEEEecCC
Confidence 999999997643
No 111
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=75.63 E-value=1.2 Score=43.91 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=29.0
Q ss_pred eEEcCCcccEEEEcCCCCCC-CCCCeEEEEeeCCCC
Q 018026 268 RITLGTAGEHYFFCTFPGHC-SAGQKLAVNVTGGSS 302 (362)
Q Consensus 268 ~v~l~~~G~~yFic~~~~HC-~~GmKl~I~V~~~~~ 302 (362)
.|+.+++|.++|.|....|+ ..||...+.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 46778899999999998887 789988888876543
No 112
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=74.10 E-value=2.1 Score=40.60 Aligned_cols=79 Identities=15% Similarity=0.172 Sum_probs=46.2
Q ss_pred CceeeeCCEEEEeecCC-----CccEEEeCccccCCCCCCCCCCcCCCCCcEEEEeeccceEEEcCCCC----CCCCCCe
Q 018026 49 NQTFTVGDTLVFNFAAG-----NHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPG----HCLGGQK 119 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~-----~h~V~~V~~~~y~~C~~~~~i~~~~~G~~~v~l~~~G~~yFic~~~~----HC~~Gmk 119 (362)
.++++.||+|++++.+. -|.+..-.....+.=..-..+.-..+-...|+++.+|++||.|...+ |=..||.
T Consensus 72 ~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~~~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~ 151 (340)
T 2bw4_A 72 LMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMN 151 (340)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCE
T ss_pred cEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCCCCccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCE
Confidence 46789999999988764 35554311100000000001111111123566678999999998764 5668999
Q ss_pred eeEEeecC
Q 018026 120 LAINVSAR 127 (362)
Q Consensus 120 ~~I~V~~~ 127 (362)
..|.|...
T Consensus 152 G~~iV~~~ 159 (340)
T 2bw4_A 152 GAIMVLPR 159 (340)
T ss_dssp EEEEEECT
T ss_pred EEEEEccC
Confidence 99988753
No 113
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=72.01 E-value=1.4 Score=43.48 Aligned_cols=81 Identities=14% Similarity=0.100 Sum_probs=46.8
Q ss_pred cCCceecCCEEEEEeCCC-----CceEEEEcccccCCCCCCCCCccCCCCCceEEcCCcccEEEEcC---CCCCCCCCCe
Q 018026 221 RNNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNPPTRITLGTAGEHYFFCT---FPGHCSAGQK 292 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~-----~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~---~~~HC~~GmK 292 (362)
..++++.||+|++.+.+. .|+++.=--...|.-.....+....+-...|.++.+|.+||.|- ...|=..||.
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~ 139 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGGGAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMY 139 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGGGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCE
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCCCCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccE
Confidence 346788999999988544 46655311001110000001111111123577789999999994 3456678999
Q ss_pred EEEEeeCCC
Q 018026 293 LAVNVTGGS 301 (362)
Q Consensus 293 l~I~V~~~~ 301 (362)
..|.|....
T Consensus 140 G~~iv~~~~ 148 (442)
T 2zoo_A 140 GLILVEPKE 148 (442)
T ss_dssp EEEEEECTT
T ss_pred EEEEEeCCC
Confidence 999997654
No 114
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=65.75 E-value=3.6 Score=38.98 Aligned_cols=77 Identities=13% Similarity=0.159 Sum_probs=47.3
Q ss_pred CCceecCCEEEEEeCCC-----CceEEEEcccccCCCCCCCCCccCCCC---CceEEcCCcccEEEEcCCCC----CCCC
Q 018026 222 NNNFSVGDILVFDYPAR-----VHDVVEVTKAAYDSCNSSSTISKSTNP---PTRITLGTAGEHYFFCTFPG----HCSA 289 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~-----~hsV~~v~~~~y~~C~~~~~~~~~~~G---~~~v~l~~~G~~yFic~~~~----HC~~ 289 (362)
..+++.||.|++++.+. -|.+..-.....+. ..+......| ...|+++.+|.+||.|...+ |=..
T Consensus 72 ~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~~---~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~ 148 (340)
T 2bw4_A 72 LMVVHENDYVELRLINPDTNTLLHNIDFHAATGALG---GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTS 148 (340)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred cEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCCC---CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhC
Confidence 35788999999988653 36554311110000 0111112223 23577788999999999764 5568
Q ss_pred CCeEEEEeeCCC
Q 018026 290 GQKLAVNVTGGS 301 (362)
Q Consensus 290 GmKl~I~V~~~~ 301 (362)
||...|.|....
T Consensus 149 Gl~G~~iV~~~~ 160 (340)
T 2bw4_A 149 GMNGAIMVLPRD 160 (340)
T ss_dssp TCEEEEEEECTB
T ss_pred cCEEEEEEccCc
Confidence 999999987643
No 115
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=65.12 E-value=6.7 Score=39.85 Aligned_cols=80 Identities=9% Similarity=0.084 Sum_probs=49.6
Q ss_pred cCceeeeCCEEEEeecCCC----ccEEE----eCccc-cCC-CCC-CCCCCcCCCCCcEEEEeeccceEEEcCCCCCCCC
Q 018026 48 ANQTFTVGDTLVFNFAAGN----HDVTR----VTQSS-FNA-CNT-TSPLSRTTNSPASVTLTASGPHYFICSFPGHCLG 116 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~----h~V~~----V~~~~-y~~-C~~-~~~i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~ 116 (362)
-.++++.||+|+.++.+.. +++.. +..+. .|. -.. -.+|.-..+-...|+++..|++||-|....|=..
T Consensus 34 P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~ 113 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSA 113 (552)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGG
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhc
Confidence 3568999999999887532 33321 11111 111 000 0122222222246777889999999999888889
Q ss_pred CCeeeEEeecC
Q 018026 117 GQKLAINVSAR 127 (362)
Q Consensus 117 Gmk~~I~V~~~ 127 (362)
||...|.|...
T Consensus 114 Gl~G~liV~~~ 124 (552)
T 1aoz_A 114 GLYGSLIVDPP 124 (552)
T ss_dssp TCEEEEEEECC
T ss_pred cCeeeEEEeCC
Confidence 99999999865
No 116
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=62.84 E-value=6.8 Score=39.75 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=48.6
Q ss_pred CceeeeCCEEEEeecCCCc----cEEE--eCc--c-ccCC-CCC-CCCCCcCCCCCcEEEEe-eccceEEEcCCCCCCCC
Q 018026 49 NQTFTVGDTLVFNFAAGNH----DVTR--VTQ--S-SFNA-CNT-TSPLSRTTNSPASVTLT-ASGPHYFICSFPGHCLG 116 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~~h----~V~~--V~~--~-~y~~-C~~-~~~i~~~~~G~~~v~l~-~~G~~yFic~~~~HC~~ 116 (362)
.++++.||+|+.++.++.. ++.. +.+ . ..|. ... -.+|.-..+-...|+++ ..|++||-|....|=..
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~ 114 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYED 114 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccC
Confidence 5689999999999886432 2211 011 1 1111 000 01222222222467777 88999999999888888
Q ss_pred CCeeeEEeecC
Q 018026 117 GQKLAINVSAR 127 (362)
Q Consensus 117 Gmk~~I~V~~~ 127 (362)
||...|.|...
T Consensus 115 Gl~G~liV~~~ 125 (534)
T 1zpu_A 115 GMKGLFIIKDD 125 (534)
T ss_dssp TCEEEEEEECT
T ss_pred cceeeEEeCCC
Confidence 99999998765
No 117
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=61.23 E-value=3.2 Score=32.65 Aligned_cols=28 Identities=25% Similarity=0.326 Sum_probs=19.3
Q ss_pred ccCCceecCCEEEEEeCCCCc-eEEEEcc
Q 018026 220 ARNNNFSVGDILVFDYPARVH-DVVEVTK 247 (362)
Q Consensus 220 a~~~~f~vGD~LvF~y~~~~h-sV~~v~~ 247 (362)
+..+.+++||.|+|+|....+ .|...+.
T Consensus 73 v~~~~L~~GD~lvF~~~~~~~f~V~If~~ 101 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRDRTFYVIIYGH 101 (104)
T ss_dssp HHHHTCCTTCEEEEEECSSSEEEEEEECS
T ss_pred HHHcCCCCCCEEEEEEcCCCeEEEEEECC
Confidence 456889999999999975433 3433343
No 118
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=60.92 E-value=5.2 Score=40.85 Aligned_cols=79 Identities=13% Similarity=0.162 Sum_probs=48.9
Q ss_pred CceeeeCCEEEEeecCCC----ccEEE--eCc--c-ccCC-CCC-CCCCCc-CCCCCcEEEEeeccceEEEcCCCCCCCC
Q 018026 49 NQTFTVGDTLVFNFAAGN----HDVTR--VTQ--S-SFNA-CNT-TSPLSR-TTNSPASVTLTASGPHYFICSFPGHCLG 116 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~~----h~V~~--V~~--~-~y~~-C~~-~~~i~~-~~~G~~~v~l~~~G~~yFic~~~~HC~~ 116 (362)
.++++.||+|+.++.+.. +++.. +.+ . ..|. -.. -.+|.- ..+-...|+++..|++||-|....|=..
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~ 147 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGN 147 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcC
Confidence 468899999999887533 34421 111 1 1111 000 012222 2222246778889999999999888888
Q ss_pred CCeeeEEeecC
Q 018026 117 GQKLAINVSAR 127 (362)
Q Consensus 117 Gmk~~I~V~~~ 127 (362)
||...|.|...
T Consensus 148 Gl~G~liV~~~ 158 (559)
T 2q9o_A 148 GVVGTIQINGP 158 (559)
T ss_dssp TCEEEEEEECC
T ss_pred CceEEEEecCC
Confidence 99999999753
No 119
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=60.53 E-value=5.9 Score=35.55 Aligned_cols=8 Identities=25% Similarity=0.547 Sum_probs=5.4
Q ss_pred eeeeCCEE
Q 018026 51 TFTVGDTL 58 (362)
Q Consensus 51 ~f~vGD~L 58 (362)
..+|||+|
T Consensus 20 ~a~vGDII 27 (227)
T 3ghp_A 20 AAEVGEII 27 (227)
T ss_dssp CCCTTCEE
T ss_pred eeecCcEE
Confidence 56677766
No 120
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=58.54 E-value=5.3 Score=40.38 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=28.0
Q ss_pred cEEEE-eeccceEEEcCCCCCCCCCCeeeEEeecC
Q 018026 94 ASVTL-TASGPHYFICSFPGHCLGGQKLAINVSAR 127 (362)
Q Consensus 94 ~~v~l-~~~G~~yFic~~~~HC~~Gmk~~I~V~~~ 127 (362)
..|++ +..|++||-|....|=..||...|.|...
T Consensus 116 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~ 150 (521)
T 1v10_A 116 YDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDP 150 (521)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEEecCCCCccEEEEeccCCchhcCceEEEEEcCC
Confidence 35664 46899999999988888899999999754
No 121
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=58.43 E-value=8.6 Score=39.65 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=29.3
Q ss_pred cEEEEeeccceEEEcCCCCCCCCCCeeeEEeecC
Q 018026 94 ASVTLTASGPHYFICSFPGHCLGGQKLAINVSAR 127 (362)
Q Consensus 94 ~~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~~~ 127 (362)
.+|++++.|++||-|....|=..||...|.|...
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 4678889999999999988888899999999743
No 122
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=56.66 E-value=5.2 Score=30.74 Aligned_cols=16 Identities=50% Similarity=0.955 Sum_probs=12.6
Q ss_pred CceecCCEEEE-EeCCC
Q 018026 223 NNFSVGDILVF-DYPAR 238 (362)
Q Consensus 223 ~~f~vGD~LvF-~y~~~ 238 (362)
..|++||.|+| +|..+
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 56999999999 47544
No 123
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=56.19 E-value=7.6 Score=36.85 Aligned_cols=79 Identities=13% Similarity=0.167 Sum_probs=44.0
Q ss_pred cCceeeeCCEEEEeecCC---CccE-----EEeCccccCC-CCC-CCCCCcCCCCCcEEEEeeccceEEEcCCCC--CCC
Q 018026 48 ANQTFTVGDTLVFNFAAG---NHDV-----TRVTQSSFNA-CNT-TSPLSRTTNSPASVTLTASGPHYFICSFPG--HCL 115 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~---~h~V-----~~V~~~~y~~-C~~-~~~i~~~~~G~~~v~l~~~G~~yFic~~~~--HC~ 115 (362)
..++++.||+|++++.+. .+++ .+......|. -.. ..+|....+-...|+++.+|.+||.|.... |=.
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~ 114 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVG 114 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTT
T ss_pred CeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhh
Confidence 457889999999988753 2222 1111100111 000 011111111124577788999999998754 334
Q ss_pred -CCCeeeEEeec
Q 018026 116 -GGQKLAINVSA 126 (362)
Q Consensus 116 -~Gmk~~I~V~~ 126 (362)
.||...|.|..
T Consensus 115 ~~Gl~G~liV~p 126 (339)
T 2zwn_A 115 VRGMWGPLIVDP 126 (339)
T ss_dssp TSCCEEEEEEEC
T ss_pred cCCceEeEEecC
Confidence 79988888864
No 124
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=55.44 E-value=9.6 Score=38.34 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=47.8
Q ss_pred CceeeeCCEEEEeecCCC--------ccEEE--eCc--c-ccCCCC--CCCCCCcCCCCCcEEEE-eeccceEEEcCCCC
Q 018026 49 NQTFTVGDTLVFNFAAGN--------HDVTR--VTQ--S-SFNACN--TTSPLSRTTNSPASVTL-TASGPHYFICSFPG 112 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~~--------h~V~~--V~~--~-~y~~C~--~~~~i~~~~~G~~~v~l-~~~G~~yFic~~~~ 112 (362)
.++++.||+|+.++.+.. ++|.. +.+ . ..|.=- +-.+|.-..+-..+|++ +..|++||-|....
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~ 115 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTT 115 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTT
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchh
Confidence 468899999999887542 23321 111 1 111100 00122222222245667 57899999999988
Q ss_pred CCCCCCeeeEEeecC
Q 018026 113 HCLGGQKLAINVSAR 127 (362)
Q Consensus 113 HC~~Gmk~~I~V~~~ 127 (362)
|=..||...|.|...
T Consensus 116 q~~~GL~G~lIV~~~ 130 (495)
T 3t6v_A 116 QYCDGLRGPFVVYDP 130 (495)
T ss_dssp GGGGTCEEEEEEECT
T ss_pred HHhcCceEEEEEcCc
Confidence 888899999999754
No 125
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=55.12 E-value=10 Score=38.26 Aligned_cols=79 Identities=11% Similarity=0.129 Sum_probs=47.7
Q ss_pred CceeeeCCEEEEeecCCC--------ccEEE--eCc--c-ccCCCC--CCCCCCcCCCCCcEEEE-eeccceEEEcCCCC
Q 018026 49 NQTFTVGDTLVFNFAAGN--------HDVTR--VTQ--S-SFNACN--TTSPLSRTTNSPASVTL-TASGPHYFICSFPG 112 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~~--------h~V~~--V~~--~-~y~~C~--~~~~i~~~~~G~~~v~l-~~~G~~yFic~~~~ 112 (362)
.++++.||+|+.++.++. ++|.- +.+ . ..|.=. +-.+|.-..+-..+|++ +..|++||-|....
T Consensus 35 ~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~ 114 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLST 114 (499)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTT
T ss_pred eEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchh
Confidence 568999999999887542 23421 111 1 111100 00122222222245666 56899999999988
Q ss_pred CCCCCCeeeEEeecC
Q 018026 113 HCLGGQKLAINVSAR 127 (362)
Q Consensus 113 HC~~Gmk~~I~V~~~ 127 (362)
|=..||...|.|...
T Consensus 115 q~~~GL~G~lIV~~~ 129 (499)
T 3pxl_A 115 QYCDGLRGPFVVYDP 129 (499)
T ss_dssp GGGGTCEEEEEEECT
T ss_pred HHhccceeEEEEcCC
Confidence 878899999999754
No 126
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=52.79 E-value=5.7 Score=33.47 Aligned_cols=26 Identities=31% Similarity=0.437 Sum_probs=18.9
Q ss_pred ccCCceecCCEEEEEeCCCCceEEEE
Q 018026 220 ARNNNFSVGDILVFDYPARVHDVVEV 245 (362)
Q Consensus 220 a~~~~f~vGD~LvF~y~~~~hsV~~v 245 (362)
+..+.+++||.++|++.....-+++|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 45789999999999997643224443
No 127
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=48.35 E-value=15 Score=37.14 Aligned_cols=81 Identities=12% Similarity=0.148 Sum_probs=49.8
Q ss_pred cCCceecCCEEEEEeCCCC----ceEEE--Ecc--c-ccCC-CC-CCCCCccCCCCCceEEcC-CcccEEEEcCCCCCCC
Q 018026 221 RNNNFSVGDILVFDYPARV----HDVVE--VTK--A-AYDS-CN-SSSTISKSTNPPTRITLG-TAGEHYFFCTFPGHCS 288 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~~----hsV~~--v~~--~-~y~~-C~-~~~~~~~~~~G~~~v~l~-~~G~~yFic~~~~HC~ 288 (362)
..++++.||.|+.++.++- ++++- +.+ . ..|. .. ...+|....+=..+|+++ ..|.+||-|-...|=.
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~ 113 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYE 113 (534)
T ss_dssp CCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGG
T ss_pred ccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCccccc
Confidence 3478899999999986542 23332 111 1 1120 00 011222211112457787 8999999999988888
Q ss_pred CCCeEEEEeeCCC
Q 018026 289 AGQKLAVNVTGGS 301 (362)
Q Consensus 289 ~GmKl~I~V~~~~ 301 (362)
.||...|.|....
T Consensus 114 ~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 114 DGMKGLFIIKDDS 126 (534)
T ss_dssp GTCEEEEEEECTT
T ss_pred CcceeeEEeCCCC
Confidence 8999999997654
No 128
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=48.10 E-value=6.2 Score=39.09 Aligned_cols=74 Identities=12% Similarity=0.125 Sum_probs=47.0
Q ss_pred CceeeeCCEEEEeecCC---CccEEE----eCccccC---CCCCCCCCCcCCCCCcEEEEee-ccceEEEcCC----CCC
Q 018026 49 NQTFTVGDTLVFNFAAG---NHDVTR----VTQSSFN---ACNTTSPLSRTTNSPASVTLTA-SGPHYFICSF----PGH 113 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~---~h~V~~----V~~~~y~---~C~~~~~i~~~~~G~~~v~l~~-~G~~yFic~~----~~H 113 (362)
.++++.||+|++++.+. .+++.. +.. ..| .|- |.-..+-...|+++. .|++||-|.. ..|
T Consensus 51 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~-~~DG~~~~~----i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q 125 (451)
T 2uxt_A 51 TIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG-PLMGGPARM----MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQ 125 (451)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCG-GGSCSGGGC----BCTTCEECCEEECCSCSEEEEEEECCTTTHHHH
T ss_pred eEEEeCCCEEEEEEEECCCCCccEEECCccCCC-CCCCCCcCc----CCCCCeEEEEEEcCCCCcceEEecCCCCchhhh
Confidence 35789999999998864 233321 111 111 132 222222235788886 8999999987 335
Q ss_pred CCCCCeeeEEeecC
Q 018026 114 CLGGQKLAINVSAR 127 (362)
Q Consensus 114 C~~Gmk~~I~V~~~ 127 (362)
-..||...|.|...
T Consensus 126 ~~~Gl~G~liV~~~ 139 (451)
T 2uxt_A 126 VYNGLAGMWLVEDE 139 (451)
T ss_dssp HHTTCEEEEEEECH
T ss_pred HhhcceEEEEEecC
Confidence 56899999999754
No 129
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=47.77 E-value=10 Score=38.64 Aligned_cols=79 Identities=13% Similarity=0.137 Sum_probs=49.2
Q ss_pred CCceecCCEEEEEeCCC----CceEEE--Ecc--c-ccCC-C-CCCCCCcc-CCCCCceEEcCCcccEEEEcCCCCCCCC
Q 018026 222 NNNFSVGDILVFDYPAR----VHDVVE--VTK--A-AYDS-C-NSSSTISK-STNPPTRITLGTAGEHYFFCTFPGHCSA 289 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~----~hsV~~--v~~--~-~y~~-C-~~~~~~~~-~~~G~~~v~l~~~G~~yFic~~~~HC~~ 289 (362)
.++++.||+|+.++.++ .++++- +.+ . ..|. - ....+|.. ..+=..+++++..|.+||-|-...|=..
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~ 147 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGN 147 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcC
Confidence 46788999999988543 245543 111 1 1221 0 00112222 1111246888999999999999888888
Q ss_pred CCeEEEEeeCC
Q 018026 290 GQKLAVNVTGG 300 (362)
Q Consensus 290 GmKl~I~V~~~ 300 (362)
||-..|.|...
T Consensus 148 Gl~G~liV~~~ 158 (559)
T 2q9o_A 148 GVVGTIQINGP 158 (559)
T ss_dssp TCEEEEEEECC
T ss_pred CceEEEEecCC
Confidence 99999999754
No 130
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=46.75 E-value=16 Score=36.97 Aligned_cols=81 Identities=15% Similarity=0.118 Sum_probs=50.3
Q ss_pred cCCceecCCEEEEEeCCC----CceEEE--Ecc--cc-cCC-C-CCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCC
Q 018026 221 RNNNFSVGDILVFDYPAR----VHDVVE--VTK--AA-YDS-C-NSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSA 289 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~----~hsV~~--v~~--~~-y~~-C-~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~ 289 (362)
..++++.||+|+.++.+. .++++- +.+ .. .|. - ....+|....+=..+++++..|.+||-|-...+=..
T Consensus 34 P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~ 113 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSA 113 (552)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGG
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhc
Confidence 347889999999988543 344442 111 11 121 0 001122221111246788999999999999888888
Q ss_pred CCeEEEEeeCCC
Q 018026 290 GQKLAVNVTGGS 301 (362)
Q Consensus 290 GmKl~I~V~~~~ 301 (362)
||-..|.|....
T Consensus 114 Gl~G~liV~~~~ 125 (552)
T 1aoz_A 114 GLYGSLIVDPPQ 125 (552)
T ss_dssp TCEEEEEEECCT
T ss_pred cCeeeEEEeCCc
Confidence 999999998754
No 131
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=46.33 E-value=12 Score=35.56 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=45.3
Q ss_pred cCCceecCCEEEEEeCCC---CceEEE-----EcccccC--CCCCCCCCccCCCCCceEEcCCcccEEEEcCCCC--CCC
Q 018026 221 RNNNFSVGDILVFDYPAR---VHDVVE-----VTKAAYD--SCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPG--HCS 288 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~---~hsV~~-----v~~~~y~--~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~--HC~ 288 (362)
..++++.||+|++++.+. .+++.- ......| .-....+|....+=...|+++.+|.+||-|-... |=.
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~ 114 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVG 114 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTT
T ss_pred CeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhh
Confidence 346789999999988532 233321 1110011 0000011221111124678889999999998654 444
Q ss_pred -CCCeEEEEeeCCC
Q 018026 289 -AGQKLAVNVTGGS 301 (362)
Q Consensus 289 -~GmKl~I~V~~~~ 301 (362)
.||...|.|....
T Consensus 115 ~~Gl~G~liV~p~~ 128 (339)
T 2zwn_A 115 VRGMWGPLIVDPKQ 128 (339)
T ss_dssp TSCCEEEEEEECSS
T ss_pred cCCceEeEEecCCC
Confidence 8999888886543
No 132
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=45.74 E-value=5.9 Score=31.04 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=16.9
Q ss_pred cCceeeeCCEEEEeecCCCccEEEe
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRV 72 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V 72 (362)
..+..++||.|+|++... +.++|
T Consensus 74 ~~~~L~~GD~lvF~~~~~--~~f~V 96 (104)
T 1yel_A 74 KDNNLEDGKYLQFIYDRD--RTFYV 96 (104)
T ss_dssp HHHTCCTTCEEEEEECSS--SEEEE
T ss_pred HHcCCCCCCEEEEEEcCC--CeEEE
Confidence 456789999999999853 33444
No 133
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=45.30 E-value=6.8 Score=33.01 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=18.2
Q ss_pred cCceeeeCCEEEEeecCCCccEEEe
Q 018026 48 ANQTFTVGDTLVFNFAAGNHDVTRV 72 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~h~V~~V 72 (362)
..+.+++||.++|++.....-+++|
T Consensus 113 ~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 113 LENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHcCCCCCCEEEEEEecCCceEEEE
Confidence 4567899999999998643335555
No 134
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=42.74 E-value=4.7 Score=37.76 Aligned_cols=78 Identities=15% Similarity=0.279 Sum_probs=32.4
Q ss_pred CceeeeCCEEEEeecCCCc--cEEEe--CccccCCCCC--CCCCCcC--CCCCcEEEEeeccceEEEcCCCCCCCCCCee
Q 018026 49 NQTFTVGDTLVFNFAAGNH--DVTRV--TQSSFNACNT--TSPLSRT--TNSPASVTLTASGPHYFICSFPGHCLGGQKL 120 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~~h--~V~~V--~~~~y~~C~~--~~~i~~~--~~G~~~v~l~~~G~~yFic~~~~HC~~Gmk~ 120 (362)
..+++.||++.|.+.+... ....+ ....++. +. .+.+... ..-...|+.+.+|.++|.|.+..|-..||..
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~-dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~ 294 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ-NHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQA 294 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEE-TTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee-CCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeE
Confidence 4567889999888765321 22211 1111211 00 1111111 1122356667899999999999999999999
Q ss_pred eEEeecC
Q 018026 121 AINVSAR 127 (362)
Q Consensus 121 ~I~V~~~ 127 (362)
.+.|..+
T Consensus 295 ~~~V~~~ 301 (306)
T 1sdd_A 295 YIDIKNC 301 (306)
T ss_dssp CC-----
T ss_pred EEEEecC
Confidence 9999755
No 135
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=42.56 E-value=19 Score=32.94 Aligned_cols=29 Identities=17% Similarity=0.223 Sum_probs=26.1
Q ss_pred eccceEEEcCCCCCCCCCCeeeEEeecCC
Q 018026 100 ASGPHYFICSFPGHCLGGQKLAINVSARG 128 (362)
Q Consensus 100 ~~G~~yFic~~~~HC~~Gmk~~I~V~~~~ 128 (362)
.+|.++|-|-+..|=..||...+.|....
T Consensus 239 npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 239 GAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 58999999999999999999999998653
No 136
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=41.92 E-value=20 Score=36.81 Aligned_cols=79 Identities=13% Similarity=0.196 Sum_probs=48.2
Q ss_pred CCceecCCEEEEEeCCCC----ceEEE--Ecc---cccCC--CCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCCC
Q 018026 222 NNNFSVGDILVFDYPARV----HDVVE--VTK---AAYDS--CNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAG 290 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~~----hsV~~--v~~---~~y~~--C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~G 290 (362)
-++++.||+|+.++.++- ++++- +.+ ...|. -....+|....+=..+|+++..|.+||-|-...|=..|
T Consensus 99 ~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~G 178 (580)
T 3sqr_A 99 AIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDG 178 (580)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGT
T ss_pred eEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEECCCCcceEEeecccccccCc
Confidence 367889999998885432 33432 111 11110 00111222222222468889999999999998887889
Q ss_pred CeEEEEeeCC
Q 018026 291 QKLAVNVTGG 300 (362)
Q Consensus 291 mKl~I~V~~~ 300 (362)
|...|.|...
T Consensus 179 L~G~lIV~~p 188 (580)
T 3sqr_A 179 LFGPLIINGP 188 (580)
T ss_dssp CEEEEEEECC
T ss_pred CEEEEEeeCc
Confidence 9999988754
No 137
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=40.72 E-value=22 Score=35.71 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=48.2
Q ss_pred CCceecCCEEEEEeCCCC--------ceEEEE--cc---cccCCC--CCCCCCccCCCCCceEEc-CCcccEEEEcCCCC
Q 018026 222 NNNFSVGDILVFDYPARV--------HDVVEV--TK---AAYDSC--NSSSTISKSTNPPTRITL-GTAGEHYFFCTFPG 285 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~~--------hsV~~v--~~---~~y~~C--~~~~~~~~~~~G~~~v~l-~~~G~~yFic~~~~ 285 (362)
.++++.||+|+.++.++- ++|+-= .+ ...|.= ....+|....+=..+|++ +..|.+||-|-...
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~ 115 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTT 115 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTT
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchh
Confidence 468899999999885432 344431 11 111110 001122222211245777 67899999999988
Q ss_pred CCCCCCeEEEEeeCC
Q 018026 286 HCSAGQKLAVNVTGG 300 (362)
Q Consensus 286 HC~~GmKl~I~V~~~ 300 (362)
|=..||...|.|...
T Consensus 116 q~~~GL~G~lIV~~~ 130 (495)
T 3t6v_A 116 QYCDGLRGPFVVYDP 130 (495)
T ss_dssp GGGGTCEEEEEEECT
T ss_pred HHhcCceEEEEEcCc
Confidence 778899999999754
No 138
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=39.64 E-value=20 Score=36.12 Aligned_cols=74 Identities=11% Similarity=0.211 Sum_probs=46.2
Q ss_pred CceeeeCCEEEEeecCC--CccEEEe-CccccCCCCCCCCCCcCCCC--CcEEEEeeccceEEEcCCCCCCCCCC-eeeE
Q 018026 49 NQTFTVGDTLVFNFAAG--NHDVTRV-TQSSFNACNTTSPLSRTTNS--PASVTLTASGPHYFICSFPGHCLGGQ-KLAI 122 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~--~h~V~~V-~~~~y~~C~~~~~i~~~~~G--~~~v~l~~~G~~yFic~~~~HC~~Gm-k~~I 122 (362)
+..++.|..|+|.=-.. +.-++.+ +-.....|..... .+..- ..+..| ++|.|||..+...-|++|- |+.|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 488 (491)
T 3l6w_A 412 KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPF--SFHAFELGKMYSV-ESGDYFMTASTTELCNDNNLRIHV 488 (491)
T ss_pred eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCC--ccCcccccceEec-CCCceEecCChHHHHhCCceeEEE
Confidence 45678888888843321 1112222 4455566875332 22211 123444 6899999999999999999 9999
Q ss_pred Eee
Q 018026 123 NVS 125 (362)
Q Consensus 123 ~V~ 125 (362)
.|.
T Consensus 489 ~~~ 491 (491)
T 3l6w_A 489 HVD 491 (491)
T ss_pred EeC
Confidence 884
No 139
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=39.02 E-value=24 Score=35.49 Aligned_cols=79 Identities=11% Similarity=0.069 Sum_probs=48.0
Q ss_pred CCceecCCEEEEEeCCCC--------ceEEEE--cc---cccCCC--CCCCCCccCCCCCceEEc-CCcccEEEEcCCCC
Q 018026 222 NNNFSVGDILVFDYPARV--------HDVVEV--TK---AAYDSC--NSSSTISKSTNPPTRITL-GTAGEHYFFCTFPG 285 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~~--------hsV~~v--~~---~~y~~C--~~~~~~~~~~~G~~~v~l-~~~G~~yFic~~~~ 285 (362)
-++++.||+|+.++.++. ++|+-= .+ ...|.= ....+|....+=..+|++ +..|.+||-|-...
T Consensus 35 ~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~ 114 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLST 114 (499)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTT
T ss_pred eEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchh
Confidence 468899999999885432 344431 11 111110 001122222111245777 67899999999988
Q ss_pred CCCCCCeEEEEeeCC
Q 018026 286 HCSAGQKLAVNVTGG 300 (362)
Q Consensus 286 HC~~GmKl~I~V~~~ 300 (362)
|=..||...|.|...
T Consensus 115 q~~~GL~G~lIV~~~ 129 (499)
T 3pxl_A 115 QYCDGLRGPFVVYDP 129 (499)
T ss_dssp GGGGTCEEEEEEECT
T ss_pred HHhccceeEEEEcCC
Confidence 778899999999754
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=38.25 E-value=26 Score=31.28 Aligned_cols=68 Identities=13% Similarity=0.190 Sum_probs=41.0
Q ss_pred CCceecCCEEEEEeCCC--CceEEEEcccccC-CCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCC---CCeEEE
Q 018026 222 NNNFSVGDILVFDYPAR--VHDVVEVTKAAYD-SCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSA---GQKLAV 295 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~--~hsV~~v~~~~y~-~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~---GmKl~I 295 (362)
...+.+|+.|.|.-.+. .|+...- ++. ..+.. ........++.+++|.||..|+. .|.. .|++.|
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~IP---~lgvK~dai----PGr~n~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~~~v 112 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFIP---RLGSQIYAM----AGMQTRLHLIANEPGTYDGICAE--ICGPGHSGMKFKA 112 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEG---GGTEEEEEC----TTCCEEEEECCSSSEEEEEEECS--CCSTTSTTCCEEE
T ss_pred eEEEeCCCEEEEEEecCCceeeEEec---ccCcEEEec----CCceEEEEEEeCCCeEEEEEccc--ccccchhhceEEE
Confidence 35677888888888543 3444321 111 01000 01111234677999999999996 6765 499999
Q ss_pred Eee
Q 018026 296 NVT 298 (362)
Q Consensus 296 ~V~ 298 (362)
.|.
T Consensus 113 ~vv 115 (205)
T 1cyx_A 113 IAT 115 (205)
T ss_dssp EEE
T ss_pred EEE
Confidence 988
No 141
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=35.94 E-value=39 Score=33.76 Aligned_cols=80 Identities=11% Similarity=0.100 Sum_probs=46.2
Q ss_pred cCceeeeCCEEEEeecCCC--------ccEEE--eCc--c-ccCCC-CCC-CCCCcCCCCCcEEEE-eeccceEEEcCCC
Q 018026 48 ANQTFTVGDTLVFNFAAGN--------HDVTR--VTQ--S-SFNAC-NTT-SPLSRTTNSPASVTL-TASGPHYFICSFP 111 (362)
Q Consensus 48 ~~~~f~vGD~L~F~~~~~~--------h~V~~--V~~--~-~y~~C-~~~-~~i~~~~~G~~~v~l-~~~G~~yFic~~~ 111 (362)
-.++++.||+|+.++.+.. +++.. +.+ . ..|.= ..+ .+|.-..+-...|++ +..|++||-|...
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~ 113 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFG 113 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECST
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEecch
Confidence 4578899999999887532 23321 011 1 11110 000 012111111134553 4689999999998
Q ss_pred CCCCCCCeeeEEeecC
Q 018026 112 GHCLGGQKLAINVSAR 127 (362)
Q Consensus 112 ~HC~~Gmk~~I~V~~~ 127 (362)
.|=..||...|.|...
T Consensus 114 ~q~~~Gl~G~liV~~~ 129 (503)
T 1hfu_A 114 TQYCDGLRGPMVIYDD 129 (503)
T ss_dssp TGGGGTCEEEEEEECT
T ss_pred hhhhCcceeeEEEcCC
Confidence 8888899999999754
No 142
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=35.56 E-value=21 Score=32.04 Aligned_cols=23 Identities=17% Similarity=0.338 Sum_probs=12.7
Q ss_pred eCCEEEEeecCCCccEEE-e---CccccCC
Q 018026 54 VGDTLVFNFAAGNHDVTR-V---TQSSFNA 79 (362)
Q Consensus 54 vGD~L~F~~~~~~h~V~~-V---~~~~y~~ 79 (362)
.|=+|-.+|+. .|+| | +.+.|.+
T Consensus 40 AGYQvNIKYDP---~vLQaVnp~TG~~y~~ 66 (227)
T 3ghp_A 40 SGYQVNIKYDP---TVLQAVNPKTGVAYTN 66 (227)
T ss_dssp EEEEEEEECCT---TTEEEECTTTCCBCCT
T ss_pred cceEEeeeeCh---hheecccCCCCCcccc
Confidence 34556677776 4544 3 3455555
No 143
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=35.38 E-value=15 Score=30.43 Aligned_cols=37 Identities=27% Similarity=0.460 Sum_probs=20.2
Q ss_pred CceeeeeeccCCcccCCCCCCCccccccCCceecCCEEEEEeC
Q 018026 194 QPATHVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFDYP 236 (362)
Q Consensus 194 ~~~~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~y~ 236 (362)
..+.++|=-..||.. .+.|+. ...++..||+++|+|.
T Consensus 77 ~gK~V~~~S~AgY~S----~V~y~~--~svtl~rG~t~~F~y~ 113 (126)
T 4dny_A 77 EGKMVRFVSSAGYSS----TVFYGD--RKVTLSVGNTLLFKYV 113 (126)
T ss_dssp TTCEEEEEEECSSCE----EEEETT--EEEEECTTCEEEEEEE
T ss_pred CCCEEEEEEecCccE----EEEECC--cEEEecCCCEEEEEEc
Confidence 344555555555542 234444 4556666666666664
No 144
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=34.24 E-value=32 Score=32.66 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=26.8
Q ss_pred eeccceEEEcCCCCCCCCCCeeeEEeecCCC
Q 018026 99 TASGPHYFICSFPGHCLGGQKLAINVSARGS 129 (362)
Q Consensus 99 ~~~G~~yFic~~~~HC~~Gmk~~I~V~~~~~ 129 (362)
+.+|.++|.|.+..|=..||...+.|.....
T Consensus 279 ~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 279 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 4689999999999999999999999986543
No 145
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=32.03 E-value=34 Score=32.23 Aligned_cols=71 Identities=13% Similarity=0.200 Sum_probs=43.3
Q ss_pred cCCceecCCEEEEEeCCC--CceEEEEcccccC-CCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCC---CCeEE
Q 018026 221 RNNNFSVGDILVFDYPAR--VHDVVEVTKAAYD-SCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSA---GQKLA 294 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~--~hsV~~v~~~~y~-~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~---GmKl~ 294 (362)
+...+.+|+.|.|.-.+. -|+... -++. .-+. + ........++.+++|.||..|+. .|.. .|++.
T Consensus 189 N~lvlP~g~~V~~~ltS~DViHsf~i---P~lg~k~da---i-PG~~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~ 259 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDVIHAWTI---PAFAVKQDA---V-PGRIAQLWFSVDQEGVYFGQCSE--LCGINHAYMPIV 259 (298)
T ss_dssp SCEEEESSSEEEEEEEESSSCEEEEE---GGGTEEEEE---C-TTCCEEEEEECSSSEEEEECCCS--CCSTTTTSCCEE
T ss_pred ceEEEEcCCEEEEEEEeCCccceeeE---cccCceEEe---c-CCceEEEEEEeCCCEEEEEEccc--ccCcCccCCeeE
Confidence 345777899999988543 355432 1111 0000 0 01111235788999999999996 6665 59999
Q ss_pred EEeeCC
Q 018026 295 VNVTGG 300 (362)
Q Consensus 295 I~V~~~ 300 (362)
|.|...
T Consensus 260 v~vvs~ 265 (298)
T 3hb3_B 260 VKAVSQ 265 (298)
T ss_dssp EEEECH
T ss_pred EEEEcH
Confidence 998764
No 146
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=31.74 E-value=13 Score=34.45 Aligned_cols=32 Identities=19% Similarity=0.083 Sum_probs=27.5
Q ss_pred EEEEeeccceEEEcCCCCCCCCCCeeeEEeec
Q 018026 95 SVTLTASGPHYFICSFPGHCLGGQKLAINVSA 126 (362)
Q Consensus 95 ~v~l~~~G~~yFic~~~~HC~~Gmk~~I~V~~ 126 (362)
.++.+.+|.+.|.|-+..|=++||...|.|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 34457899999999999999999999999863
No 147
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=31.25 E-value=37 Score=31.29 Aligned_cols=70 Identities=13% Similarity=0.199 Sum_probs=43.7
Q ss_pred cCCceecCCEEEEEeCCC--CceEEEEcccccC-CCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCCC---CeEE
Q 018026 221 RNNNFSVGDILVFDYPAR--VHDVVEVTKAAYD-SCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAG---QKLA 294 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~--~hsV~~v~~~~y~-~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~G---mKl~ 294 (362)
+...+.+|+.|.|.-.+. -|+...- ++. ..+. + ........++.+++|.+|..|+. -|..| |++.
T Consensus 171 n~l~lP~g~~v~~~~tS~DViHsf~ip---~l~~k~da---~-PG~~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M~~~ 241 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADVIHSWTVP---AFGVKQDA---V-PGRLAQLWFRAEREGIFFGQCSE--LCGISHAYMPIT 241 (262)
T ss_dssp SCEEEETTSEEEEEEEESSSCEEEEEG---GGTEEEEE---C-BTCCEEEEEECCSCEEEEECCCS--CCSTTGGGCCEE
T ss_pred ceEEEecCCEEEEEEEECcccceeeec---ccCceEEe---c-CCceeEEEEecCCcEEEEEEChH--hcccCcccCeEE
Confidence 346788999999988643 3544321 111 0000 0 01111235788999999999996 77765 9998
Q ss_pred EEeeC
Q 018026 295 VNVTG 299 (362)
Q Consensus 295 I~V~~ 299 (362)
|.|..
T Consensus 242 v~vv~ 246 (262)
T 2gsm_B 242 VKVVS 246 (262)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88865
No 148
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=30.55 E-value=34 Score=30.80 Aligned_cols=69 Identities=9% Similarity=0.130 Sum_probs=41.5
Q ss_pred CCceecCCEEEEEeCCC--CceEEEEcccccC-CCCCCCCCccCCCCCceEEcCCcccEEEEcCCCCCCCCC---CeEEE
Q 018026 222 NNNFSVGDILVFDYPAR--VHDVVEVTKAAYD-SCNSSSTISKSTNPPTRITLGTAGEHYFFCTFPGHCSAG---QKLAV 295 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~--~hsV~~v~~~~y~-~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~~HC~~G---mKl~I 295 (362)
...+.+|+.++|.-.+. -|+... -++. ..+.. | .......++.+++|.+|..|+. -|..| |.+.|
T Consensus 141 ~lvlP~~~~Vr~~vtS~DViHsf~v---P~lg~K~Dai-P---Gr~n~~~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v 211 (227)
T 1v54_B 141 RVVLPMEMTIRMLVSSEDVLHSWAV---PSLGLKTDAI-P---GRLNQTTLMSSRPGLYYGQCSE--ICGSNHSFMPIVL 211 (227)
T ss_dssp CEEEETTSCEEEEEEESSSCEEEEE---GGGTEEEEEC-T---TCCEEEEECCSSCEEEEECCCS--CCSTTGGGCCEEE
T ss_pred eEEEecCCEEEEEEEeCcccceeee---cccCcEEEec-C---CceEEEEEecCCcEEEEEEehh--hcccccccCeEEE
Confidence 45677888888887543 354432 1111 11100 0 1111234778999999999986 78765 89888
Q ss_pred EeeC
Q 018026 296 NVTG 299 (362)
Q Consensus 296 ~V~~ 299 (362)
.|..
T Consensus 212 ~vv~ 215 (227)
T 1v54_B 212 ELVP 215 (227)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8864
No 149
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=29.96 E-value=27 Score=34.15 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=43.2
Q ss_pred CceeeeCCEEEEeecCC---CccEEE--eCcc-ccCCCCCCCCCCcCCCCC--cEEEEe--eccceEEEcCCCC----CC
Q 018026 49 NQTFTVGDTLVFNFAAG---NHDVTR--VTQS-SFNACNTTSPLSRTTNSP--ASVTLT--ASGPHYFICSFPG----HC 114 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~---~h~V~~--V~~~-~y~~C~~~~~i~~~~~G~--~~v~l~--~~G~~yFic~~~~----HC 114 (362)
.++++.||+|+.++.+. .+++.. +... ..|. ..+...-.+. ..|++. .+|++||-|...+ |=
T Consensus 48 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG----~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~ 123 (439)
T 2xu9_A 48 TLRVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDD----PFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQL 123 (439)
T ss_dssp EEEECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSC----TTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCCcceEeCCCCCCccccC----CcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHH
Confidence 46889999999988753 233321 0111 1111 0111111222 345542 5899999998743 55
Q ss_pred CCCCeeeEEeecC
Q 018026 115 LGGQKLAINVSAR 127 (362)
Q Consensus 115 ~~Gmk~~I~V~~~ 127 (362)
..||...|.|...
T Consensus 124 ~~Gl~G~liV~~~ 136 (439)
T 2xu9_A 124 FAGLLGALVVESS 136 (439)
T ss_dssp HTTCCEEEEECCG
T ss_pred HhhCeEEEEEcCc
Confidence 6799999999753
No 150
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=29.59 E-value=19 Score=35.48 Aligned_cols=79 Identities=10% Similarity=0.060 Sum_probs=47.9
Q ss_pred CCceecCCEEEEEeCCC---CceEEEE--cc-cccCCCCCCCCCccCCCCCceEEcCC-cccEEEEcCC----CCCCCCC
Q 018026 222 NNNFSVGDILVFDYPAR---VHDVVEV--TK-AAYDSCNSSSTISKSTNPPTRITLGT-AGEHYFFCTF----PGHCSAG 290 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~---~hsV~~v--~~-~~y~~C~~~~~~~~~~~G~~~v~l~~-~G~~yFic~~----~~HC~~G 290 (362)
.++++.||.|++++.++ .+++..= .+ ...|. ....+|....+=..+++++. .|.+||-|-. ..|=..|
T Consensus 51 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG-~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~G 129 (451)
T 2uxt_A 51 TIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMG-GPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNG 129 (451)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSC-SGGGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTT
T ss_pred eEEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCC-CCcCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhc
Confidence 35788999999998644 3455431 11 11221 00112222222235688886 8999999987 3456689
Q ss_pred CeEEEEeeCCC
Q 018026 291 QKLAVNVTGGS 301 (362)
Q Consensus 291 mKl~I~V~~~~ 301 (362)
|-..|.|....
T Consensus 130 l~G~liV~~~~ 140 (451)
T 2uxt_A 130 LAGMWLVEDEV 140 (451)
T ss_dssp CEEEEEEECHH
T ss_pred ceEEEEEecCc
Confidence 99999997643
No 151
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=27.84 E-value=26 Score=26.26 Aligned_cols=17 Identities=18% Similarity=0.503 Sum_probs=14.0
Q ss_pred CCceecCCEEEEEeCCC
Q 018026 222 NNNFSVGDILVFDYPAR 238 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~ 238 (362)
-..|++||.|.|.|...
T Consensus 51 l~~lk~Gd~V~F~~~~~ 67 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQQ 67 (80)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEEe
Confidence 36799999999999643
No 152
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=27.05 E-value=27 Score=26.69 Aligned_cols=19 Identities=16% Similarity=0.508 Sum_probs=15.0
Q ss_pred ccCCceecCCEEEEEeCCC
Q 018026 220 ARNNNFSVGDILVFDYPAR 238 (362)
Q Consensus 220 a~~~~f~vGD~LvF~y~~~ 238 (362)
+.-..|++||.|.|.|...
T Consensus 57 ~~l~~lk~Gd~V~F~~~~~ 75 (88)
T 2vb2_X 57 TKMSEIKTGDKVAFNFVQQ 75 (88)
T ss_dssp CEECCCCTTCEEEEEEEEE
T ss_pred hhhhcCCCCCEEEEEEEEe
Confidence 3346799999999999643
No 153
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=26.96 E-value=40 Score=33.81 Aligned_cols=79 Identities=11% Similarity=0.102 Sum_probs=47.0
Q ss_pred CCceecCCEEEEEeCCC--------CceEEE--Ecc--c-ccCC-CC-CCCCCccCCCCCceEEc-CCcccEEEEcCCCC
Q 018026 222 NNNFSVGDILVFDYPAR--------VHDVVE--VTK--A-AYDS-CN-SSSTISKSTNPPTRITL-GTAGEHYFFCTFPG 285 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~--------~hsV~~--v~~--~-~y~~-C~-~~~~~~~~~~G~~~v~l-~~~G~~yFic~~~~ 285 (362)
-++++.||.|+.++.++ .++|+- +.+ . ..|. -. ...+|....+=..++++ +..|.+||-|-...
T Consensus 56 ~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~ 135 (521)
T 1v10_A 56 LITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLST 135 (521)
T ss_dssp CEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTT
T ss_pred cEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCC
Confidence 46788999999988543 234432 111 1 1110 00 01122211111235774 57899999999988
Q ss_pred CCCCCCeEEEEeeCC
Q 018026 286 HCSAGQKLAVNVTGG 300 (362)
Q Consensus 286 HC~~GmKl~I~V~~~ 300 (362)
|=..||-..|.|...
T Consensus 136 q~~~Gl~G~liV~~~ 150 (521)
T 1v10_A 136 QYCDGLRGAFVVYDP 150 (521)
T ss_dssp GGGGTCEEEEEEECT
T ss_pred chhcCceEEEEEcCC
Confidence 888899999999754
No 154
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=26.45 E-value=38 Score=30.20 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=48.7
Q ss_pred eEEEecCCCCCcCCCCCCCCCCcc-ccCceeeeCCEEEEeecCC--CccEEEeCccccCCCCCCCCCC-cCCCCC---cE
Q 018026 23 TRHVVGDALGWIVPPNGPATYSNW-AANQTFTVGDTLVFNFAAG--NHDVTRVTQSSFNACNTTSPLS-RTTNSP---AS 95 (362)
Q Consensus 23 ~~~~VGg~~GW~~~~~~~~~y~~W-a~~~~f~vGD~L~F~~~~~--~h~V~~V~~~~y~~C~~~~~i~-~~~~G~---~~ 95 (362)
+..++|-.=.|.+.-. ++.-- .+...+.+|+.|.|...+. .|+... - .+. ++ ...-|. ..
T Consensus 18 tIkVig~QW~W~f~Yp---d~~i~~~n~l~lP~g~~V~~~lTS~DViHSF~I-P--~lg-------vK~daiPGr~n~l~ 84 (205)
T 1cyx_A 18 TIEVVSMDWKWFFIYP---EQGIATVNEIAFPANTPVYFKVTSNSVMHSFFI-P--RLG-------SQIYAMAGMQTRLH 84 (205)
T ss_dssp EEEEEEETTEEEEEET---TTTEEEESEEEEETTSCEEEEEEESSSCEEEEE-G--GGT-------EEEEECTTCCEEEE
T ss_pred EEEEEEEEeEEEEEeC---CCCccccceEEEeCCCEEEEEEecCCceeeEEe-c--ccC-------cEEEecCCceEEEE
Confidence 3455676656765310 01000 1235677888888888742 233322 1 111 10 011122 35
Q ss_pred EEEeeccceEEEcCCCCCCCC---CCeeeEEee
Q 018026 96 VTLTASGPHYFICSFPGHCLG---GQKLAINVS 125 (362)
Q Consensus 96 v~l~~~G~~yFic~~~~HC~~---Gmk~~I~V~ 125 (362)
++.+++|.||..|+. .|.. .|++.|.|.
T Consensus 85 ~~~~~pG~y~g~CsE--~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 85 LIANEPGTYDGICAE--ICGPGHSGMKFKAIAT 115 (205)
T ss_dssp ECCSSSEEEEEEECS--CCSTTSTTCCEEEEEE
T ss_pred EEeCCCeEEEEEccc--ccccchhhceEEEEEE
Confidence 667899999999986 6655 588888887
No 155
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=26.38 E-value=22 Score=39.15 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=51.6
Q ss_pred CceeeeCCEEEEeecC-----CCccEEEeC------ccccCCCCCCCCCCcCCCCCcEEEEeeccceEEEcCCCCCCCCC
Q 018026 49 NQTFTVGDTLVFNFAA-----GNHDVTRVT------QSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGG 117 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~-----~~h~V~~V~------~~~y~~C~~~~~i~~~~~G~~~v~l~~~G~~yFic~~~~HC~~G 117 (362)
..++..||+|+.+... .-|++.+-. ...++.|.. .-..+-...++++..|.+|+-|.+..|=..|
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i----~pg~~~t~~~~~~~~Gt~~~h~h~~~~~~~G 708 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANL----FPQTSLTLHMWPDTEGTFNVECLTTDHYTGG 708 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEE----CTTCEEEEEECCCSCEEEEEEECSHHHHHTT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEee----cCCceEEEEEecCCCeEEEEecCCCcccCCC
Confidence 5789999999987764 236664421 122344542 2222223456677899999999999999999
Q ss_pred CeeeEEeecC
Q 018026 118 QKLAINVSAR 127 (362)
Q Consensus 118 mk~~I~V~~~ 127 (362)
|+..+.|..+
T Consensus 709 m~g~~~V~~~ 718 (1065)
T 2j5w_A 709 MKQKYTVNQC 718 (1065)
T ss_dssp CEEEEEEECC
T ss_pred cEEEEEEcCC
Confidence 9999999765
No 156
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=26.26 E-value=79 Score=31.87 Aligned_cols=104 Identities=15% Similarity=0.206 Sum_probs=58.2
Q ss_pred ceeeeeecc-CCcccCCCCCCCccccccC--CceecCCEEEEEeCC---C-CceEE-------EEcc--cccC-C----C
Q 018026 195 PATHVVGGA-LGWTVPPNASVGYQNWARN--NNFSVGDILVFDYPA---R-VHDVV-------EVTK--AAYD-S----C 253 (362)
Q Consensus 195 ~~~~~VG~~-~GW~~~~~~~~~Y~~Wa~~--~~f~vGD~LvF~y~~---~-~hsV~-------~v~~--~~y~-~----C 253 (362)
..++..+.. ..|.+. +..|..|... .+++.|+++++.+.+ . .|-++ .+.+ ..+. . -
T Consensus 349 ~~~~~~~~~~~~w~iN---G~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~ 425 (534)
T 3abg_A 349 PRQFRFGRTGPTWTIN---GVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYE 425 (534)
T ss_dssp CEEEECSCCCSTTCCC---CBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGG
T ss_pred ceEEEEeccCceeEEC---CcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccc
Confidence 345555432 348773 3456665433 467889988876643 1 34443 2333 1111 0 0
Q ss_pred -CCCCCCccCCCCCceEE---cCCcccEEEEcCCCCCCCCCCeEEEEeeCCC
Q 018026 254 -NSSSTISKSTNPPTRIT---LGTAGEHYFFCTFPGHCSAGQKLAVNVTGGS 301 (362)
Q Consensus 254 -~~~~~~~~~~~G~~~v~---l~~~G~~yFic~~~~HC~~GmKl~I~V~~~~ 301 (362)
...+.+.....+..+|. -+.+|.+.|=|-...|=..||-..+.|....
T Consensus 426 ~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 426 SGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp GSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred cCCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 00111112222223333 3578999999999999999999999998655
No 157
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=25.65 E-value=1.2 Score=26.08 Aligned_cols=19 Identities=37% Similarity=0.739 Sum_probs=14.2
Q ss_pred CceeeeCCEEEEeecCCCc
Q 018026 49 NQTFTVGDTLVFNFAAGNH 67 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~~h 67 (362)
++.|+|.|.|.|.|....|
T Consensus 4 skpfnvddvlkftftgekh 22 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEKH 22 (27)
T ss_dssp --CCCHHHHHHHHHHCCCC
T ss_pred CCCcChhheEEEEeccccc
Confidence 5679999999999986554
No 158
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=25.38 E-value=23 Score=28.95 Aligned_cols=18 Identities=22% Similarity=0.578 Sum_probs=15.1
Q ss_pred ccCCceecCCEEEEEeCC
Q 018026 220 ARNNNFSVGDILVFDYPA 237 (362)
Q Consensus 220 a~~~~f~vGD~LvF~y~~ 237 (362)
+..+.+++||.|+|....
T Consensus 87 V~~~~L~~GD~~~F~~~~ 104 (130)
T 1wid_A 87 VKEKNLRAGDVVSFSRSN 104 (130)
T ss_dssp HHHTTCCTTCEEEEEECC
T ss_pred HHHcCCCCCCEEEEEEec
Confidence 456889999999999865
No 159
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=25.04 E-value=30 Score=26.12 Aligned_cols=17 Identities=18% Similarity=0.460 Sum_probs=14.2
Q ss_pred CCceecCCEEEEEeCCC
Q 018026 222 NNNFSVGDILVFDYPAR 238 (362)
Q Consensus 222 ~~~f~vGD~LvF~y~~~ 238 (362)
-..+++||.|.|.|...
T Consensus 45 l~~lk~Gd~V~F~~~~~ 61 (82)
T 2l55_A 45 PQGLKAGDRVAFSFRLD 61 (82)
T ss_dssp CSSCSTTCEEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEEC
Confidence 46799999999999653
No 160
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=24.76 E-value=15 Score=36.24 Aligned_cols=75 Identities=9% Similarity=0.026 Sum_probs=45.4
Q ss_pred CceeeeCCEEEEeecCC---CccEEE--eCcc-ccC---CCCCCCCCCcCCCCCcEEEEe-eccceEEEcCC----CCCC
Q 018026 49 NQTFTVGDTLVFNFAAG---NHDVTR--VTQS-SFN---ACNTTSPLSRTTNSPASVTLT-ASGPHYFICSF----PGHC 114 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~---~h~V~~--V~~~-~y~---~C~~~~~i~~~~~G~~~v~l~-~~G~~yFic~~----~~HC 114 (362)
.++++.||+|+.++.+. .+++.. +... ..| .|- |.-..+-...|++. ..|++||-|.. ..|-
T Consensus 39 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~----i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~ 114 (448)
T 3aw5_A 39 TIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSFA----ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQF 114 (448)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCHHHHTCGGGC----BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHH
T ss_pred eEEEeCCCEEEEEEEECCCCceeEEeCCccCCCccCCCCCcc----CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHH
Confidence 46789999999998764 233321 0111 111 132 21111222457777 68999999983 3455
Q ss_pred CCCCeeeEEeecC
Q 018026 115 LGGQKLAINVSAR 127 (362)
Q Consensus 115 ~~Gmk~~I~V~~~ 127 (362)
..||...|.|...
T Consensus 115 ~~Gl~G~liV~~~ 127 (448)
T 3aw5_A 115 YMGQLGLVIVEDS 127 (448)
T ss_dssp HTTCCEEEEEECT
T ss_pred hccceEEEEEeCC
Confidence 6899999999754
No 161
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=24.60 E-value=34 Score=27.38 Aligned_cols=12 Identities=33% Similarity=0.800 Sum_probs=10.4
Q ss_pred CCceecCCEEEE
Q 018026 222 NNNFSVGDILVF 233 (362)
Q Consensus 222 ~~~f~vGD~LvF 233 (362)
.+++++||.|+|
T Consensus 31 ~~~ikvGD~I~f 42 (109)
T 2z0t_A 31 RRQIKPGDIIIF 42 (109)
T ss_dssp GGGCCTTCEEEE
T ss_pred hhcCCCCCEEEE
Confidence 357899999999
No 162
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=23.52 E-value=21 Score=28.77 Aligned_cols=12 Identities=33% Similarity=0.797 Sum_probs=10.1
Q ss_pred ceeeeCCEEEEe
Q 018026 50 QTFTVGDTLVFN 61 (362)
Q Consensus 50 ~~f~vGD~L~F~ 61 (362)
+.+++||+|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 467999999994
No 163
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=23.32 E-value=43 Score=33.45 Aligned_cols=79 Identities=11% Similarity=0.111 Sum_probs=44.6
Q ss_pred CceeeeCCEEEEeecCC---CccEEE--eCc-cccCCCCCCCCCCcCCCCCcEEEEee--ccceEEEcCCC----CCCCC
Q 018026 49 NQTFTVGDTLVFNFAAG---NHDVTR--VTQ-SSFNACNTTSPLSRTTNSPASVTLTA--SGPHYFICSFP----GHCLG 116 (362)
Q Consensus 49 ~~~f~vGD~L~F~~~~~---~h~V~~--V~~-~~y~~C~~~~~i~~~~~G~~~v~l~~--~G~~yFic~~~----~HC~~ 116 (362)
.++++.||+|+.++.+. .++|.. +.. ...|. ....+|.-..+-...|++.. .|++||-|... .|=..
T Consensus 83 tIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~~DG-~pq~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~ 161 (481)
T 3zx1_A 83 KIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDG-SPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFM 161 (481)
T ss_dssp BEEEETTCEEEEEEEECSSSCBCCEEETCCCCGGGSC-CTTSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHT
T ss_pred eEEEECCcEEEEEEEeCCCCCeeEEecCcccCCccCC-CccCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhc
Confidence 46899999999998763 222211 001 11111 00112221112224566655 69999999763 24457
Q ss_pred CCeeeEEeecCC
Q 018026 117 GQKLAINVSARG 128 (362)
Q Consensus 117 Gmk~~I~V~~~~ 128 (362)
||...|.|....
T Consensus 162 GL~G~lIV~~~~ 173 (481)
T 3zx1_A 162 GLAGAFVIKAKK 173 (481)
T ss_dssp TCCEEEEEECSS
T ss_pred cceEEEEEcCcc
Confidence 999999998654
No 164
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=23.15 E-value=49 Score=31.10 Aligned_cols=32 Identities=13% Similarity=0.136 Sum_probs=24.9
Q ss_pred cEEEEeeccceEEEcCCCCCCCC---CCeeeEEeecC
Q 018026 94 ASVTLTASGPHYFICSFPGHCLG---GQKLAINVSAR 127 (362)
Q Consensus 94 ~~v~l~~~G~~yFic~~~~HC~~---Gmk~~I~V~~~ 127 (362)
..++.+++|.||..|+. -|.. .|++.|.|...
T Consensus 231 ~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 231 LWFSVDQEGVYFGQCSE--LCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp EEEECSSSEEEEECCCS--CCSTTTTSCCEEEEEECH
T ss_pred EEEEeCCCEEEEEEccc--ccCcCccCCeeEEEEEcH
Confidence 35777899999999986 5654 58888888743
No 165
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=22.07 E-value=50 Score=32.90 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=47.0
Q ss_pred cCCceecCCEEEEEeCCC--------CceEEE--Ecc--c-ccCCC-C-CCCCCccCCCCCceEEc-CCcccEEEEcCCC
Q 018026 221 RNNNFSVGDILVFDYPAR--------VHDVVE--VTK--A-AYDSC-N-SSSTISKSTNPPTRITL-GTAGEHYFFCTFP 284 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y~~~--------~hsV~~--v~~--~-~y~~C-~-~~~~~~~~~~G~~~v~l-~~~G~~yFic~~~ 284 (362)
..++++.||.|+.++.++ .++++- +.+ . ..|.= . ...+|....+=..++++ +..|.+||-|-..
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~ 113 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFG 113 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECST
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEecch
Confidence 446788999999988532 234432 111 1 11210 0 00122211111235664 5689999999998
Q ss_pred CCCCCCCeEEEEeeCC
Q 018026 285 GHCSAGQKLAVNVTGG 300 (362)
Q Consensus 285 ~HC~~GmKl~I~V~~~ 300 (362)
.|=..||-..|.|...
T Consensus 114 ~q~~~Gl~G~liV~~~ 129 (503)
T 1hfu_A 114 TQYCDGLRGPMVIYDD 129 (503)
T ss_dssp TGGGGTCEEEEEEECT
T ss_pred hhhhCcceeeEEEcCC
Confidence 8888899999999754
No 166
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=21.88 E-value=46 Score=33.09 Aligned_cols=15 Identities=20% Similarity=0.255 Sum_probs=11.0
Q ss_pred cCCceecCCEEEEEe
Q 018026 221 RNNNFSVGDILVFDY 235 (362)
Q Consensus 221 ~~~~f~vGD~LvF~y 235 (362)
....|+.||.|..--
T Consensus 100 ~el~~~~gd~i~v~~ 114 (535)
T 2h8h_A 100 TDLSFKKGERLQIVN 114 (535)
T ss_dssp SBCCBCTTCEEEEEE
T ss_pred CcCCcCCCCEEEEEE
Confidence 346899999986543
No 167
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=21.61 E-value=47 Score=26.00 Aligned_cols=29 Identities=7% Similarity=0.250 Sum_probs=23.7
Q ss_pred eeeeeccCCcccCCCCCCCccccccCCceecCCEEEEE
Q 018026 197 THVVGGALGWTVPPNASVGYQNWARNNNFSVGDILVFD 234 (362)
Q Consensus 197 ~~~VG~~~GW~~~~~~~~~Y~~Wa~~~~f~vGD~LvF~ 234 (362)
..+|||..| . ..++-|.+. |+.||+|.+.
T Consensus 41 ~~~l~DeTG-~------I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA-R------IRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC-E------EEEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC-e------EEEEEEcCc--cCCCCEEEEE
Confidence 678999887 2 347888877 9999999997
No 168
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=21.51 E-value=57 Score=29.97 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=24.3
Q ss_pred cEEEEeeccceEEEcCCCCCCCCC---CeeeEEeec
Q 018026 94 ASVTLTASGPHYFICSFPGHCLGG---QKLAINVSA 126 (362)
Q Consensus 94 ~~v~l~~~G~~yFic~~~~HC~~G---mk~~I~V~~ 126 (362)
..++.+++|.||..|+. -|..| |++.|.|..
T Consensus 213 ~~~~~~~~G~y~g~Cse--~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 213 LWFRAEREGIFFGQCSE--LCGISHAYMPITVKVVS 246 (262)
T ss_dssp EEEECCSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEEecCCcEEEEEEChH--hcccCcccCeEEEEEEc
Confidence 35778999999999986 66654 888887764
No 169
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=20.51 E-value=40 Score=35.83 Aligned_cols=29 Identities=7% Similarity=-0.066 Sum_probs=24.0
Q ss_pred CcccEEEEcCCCC--CCCCCCeEEEEeeCCC
Q 018026 273 TAGEHYFFCTFPG--HCSAGQKLAVNVTGGS 301 (362)
Q Consensus 273 ~~G~~yFic~~~~--HC~~GmKl~I~V~~~~ 301 (362)
..|.+||.|.... |...||...|.|....
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCc
Confidence 6799999998865 6779999999887654
Done!