Your job contains 1 sequence.
>018028
MLSALLFLTLHLLFVLSSLSTKALTKHTKTKKSHFFFFSSSNMAVEARRIDLLPSQLISH
RDFIKSNQVNANTQMDSFFPFAEPMPEQTMLPFYQAFDCNPISTKTSMDKADSGLTYNIP
APRKRQRDSINDLDAFSLVSQKQKLSGFSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVIL
ELEEQRKRQSRMLISAIQEGVANKLKEKDEEIHRMRKLNWVLQERVKSLFVENQIWRDLA
QTNEATANTLRSNLEQVLAHVGGEGDDCAGGGATLAAAAEDDAESSCGSSDFGRSTIAGE
GAQDKAVGGGRMLCRRCGEKESSVLLLPCRHLCLCTVCGSCLIGSCPVCNFVVDASLHVN
LS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018028
(362 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2153227 - symbol:BRG1 "BOI-related gene 1" spe... 490 4.8e-66 2
TAIR|locus:2133990 - symbol:RING species:3702 "Arabidopsi... 635 3.8e-62 1
TAIR|locus:2089225 - symbol:BRG3 "BOI-related gene 3" spe... 348 3.3e-51 2
TAIR|locus:2207385 - symbol:BRG2 "BOI-related gene 2" spe... 477 4.2e-49 2
TAIR|locus:2019983 - symbol:AT1G10650 species:3702 "Arabi... 186 2.4e-21 2
TAIR|locus:2036596 - symbol:AT1G60610 species:3702 "Arabi... 247 4.9e-21 1
TAIR|locus:2825812 - symbol:SBP1 "S-ribonuclease binding ... 162 9.0e-19 2
TAIR|locus:2131571 - symbol:AT4G35070 "AT4G35070" species... 170 1.6e-18 2
TAIR|locus:2035564 - symbol:AT1G32740 "AT1G32740" species... 214 1.6e-17 1
TAIR|locus:2129336 - symbol:AT4G17680 species:3702 "Arabi... 212 7.9e-17 1
TAIR|locus:2171042 - symbol:AT5G47050 species:3702 "Arabi... 138 1.5e-14 2
TAIR|locus:2054224 - symbol:AT2G12290 "AT2G12290" species... 174 4.5e-13 1
TAIR|locus:2014089 - symbol:AT1G18470 species:3702 "Arabi... 119 0.00022 1
TAIR|locus:2031471 - symbol:AT1G73950 species:3702 "Arabi... 115 0.00061 1
UNIPROTKB|Q3SX32 - symbol:M6PRBP1 "Uncharacterized protei... 114 0.00071 1
ZFIN|ZDB-GENE-060526-97 - symbol:lrsam1 "leucine rich rep... 102 0.00088 2
>TAIR|locus:2153227 [details] [associations]
symbol:BRG1 "BOI-related gene 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0043067
"regulation of programmed cell death" evidence=IMP]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0043067
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AB019224
HOGENOM:HOG000090929 ProtClustDB:CLSN2685702 InterPro:IPR017066
PIRSF:PIRSF036836 EMBL:AY058839 EMBL:AY143844 IPI:IPI00531562
RefSeq:NP_851134.1 UniGene:At.26652 ProteinModelPortal:Q9FHE4
SMR:Q9FHE4 PRIDE:Q9FHE4 EnsemblPlants:AT5G45100.1 GeneID:834543
KEGG:ath:AT5G45100 TAIR:At5g45100 InParanoid:Q9FHE4 OMA:MTASVHV
PhylomeDB:Q9FHE4 Genevestigator:Q9FHE4 Uniprot:Q9FHE4
Length = 294
Score = 490 (177.5 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 118/222 (53%), Positives = 154/222 (69%)
Query: 43 MAVEARRIDLLPSQLISHRDFIKSNQVNANT-QMDSFFPFAEPMPEQTMLPFYQAFDCNP 101
MAVEAR ++L SQ I++R+ +KS Q N N Q + F + ++ + Q D P
Sbjct: 1 MAVEARHMNLFSSQYITNRECVKS-QTNMNNGQQIAGGGFPVTIGDRNL----QYID--P 53
Query: 102 ISTKTSMDKADSGLTYNIPAPRKRQRDSINDLDAFSLVSQKQKLSGFS--SLLDQDIIFR 159
I+ S +K++S LT A KRQRDS D DA + SQK++ FS SL+D +++ +
Sbjct: 54 IN---SFNKSESELT----AISKRQRDSTFDSDAL-IASQKRRAIAFSPASLIDAELVSQ 105
Query: 160 LQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKLKEKDEEIHRMRKLN 219
+QQQ SEIDR++AQ TE + +ELE +++ Q+RML SA+Q + KLK KDEEI RM KLN
Sbjct: 106 IQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLN 165
Query: 220 WVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQVLAHV 261
WVLQERVK+L+VENQIWRDLAQTNEATAN LRSNLEQVLA V
Sbjct: 166 WVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQV 207
Score = 200 (75.5 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 307 VGGGRMLCRRCGEKESSVLLLPCRHLCLCTVCGS-CLIGSCPVCNFVVDASLHVNLS 362
V GG C+RCGE +SVL+LPCRHLCLCTVCGS L+ +CPVC+ V+ AS+HVN+S
Sbjct: 240 VNGG---CKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNMS 293
>TAIR|locus:2133990 [details] [associations]
symbol:RING species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0042742 "defense response to bacterium" evidence=IMP]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0043069
"negative regulation of programmed cell death" evidence=IMP]
[GO:2000117 "negative regulation of cysteine-type endopeptidase
activity" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0050832 GO:GO:0046872 GO:GO:0042742 GO:GO:0008270
GO:GO:0009739 GO:GO:0043069 GO:GO:0004842 EMBL:AL024486
EMBL:AL161551 GO:GO:2000117 IPI:IPI00528900 PIR:T04751
RefSeq:NP_193705.1 UniGene:At.27286 ProteinModelPortal:O81851
SMR:O81851 STRING:O81851 PRIDE:O81851 EnsemblPlants:AT4G19700.1
GeneID:827714 KEGG:ath:AT4G19700 TAIR:At4g19700 eggNOG:NOG331530
HOGENOM:HOG000090929 InParanoid:O81851 OMA:MAVEAPH PhylomeDB:O81851
ProtClustDB:CLSN2685702 Genevestigator:O81851 InterPro:IPR017066
PIRSF:PIRSF036836 Uniprot:O81851
Length = 304
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 152/328 (46%), Positives = 207/328 (63%)
Query: 43 MAVEARRIDLLPSQLIS-HRDFIKSNQVNANTQMDSFFPFAEPMPEQTMLPFYQAFDCNP 101
MAV+A +++ SQ IS +RD +K Q N N F F + L ++F P
Sbjct: 1 MAVQAHHMNIF-SQFISPNRDCVKF-QENMN---HGEFEFTGG---EVPLITGESFAVEP 52
Query: 102 ISTKTSMDKADSGLTYNIPAP---RKRQRDSINDLDAFSLVSQKQKL--SGFSSLLDQDI 156
++ K + +KA+SGL+YN P KRQRD D+ + V ++ S SL++ ++
Sbjct: 53 LAAKANFNKAESGLSYNFTVPPLSTKRQRD-FQFSDSNAPVKRRSVAFDSSSPSLINVEL 111
Query: 157 IFRLQ-QQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKLKEKDEEIHRM 215
+ ++Q QQQSEIDR++AQ TEK+ +E+E +++ Q+RML SA+Q +A KLKEKD+EI R+
Sbjct: 112 VSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRI 171
Query: 216 RKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQVLAHVXXXXXXXXXXXXXX 275
R LNWVLQERVKSL+VENQIWRD+AQTNEA ANTLR+NL+QVLA +
Sbjct: 172 RNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFPTASAVVEDDA 231
Query: 276 XXXXXXXXXXXXXXXXFGRSTIAGEGAQDKAVGGGRMLCRRCGEKESSVLLLPCRHLCLC 335
G G G AVGGG C+RCGE+E+SVL+LPCRHLCLC
Sbjct: 232 ESSC-------------GSCCGDGGGEAVTAVGGG---CKRCGEREASVLVLPCRHLCLC 275
Query: 336 TVCG-SCLIGSCPVCNFVVDASLHVNLS 362
TVCG S L+ +CPVC+ V++AS+HVN+S
Sbjct: 276 TVCGGSALLRTCPVCDMVMNASVHVNMS 303
>TAIR|locus:2089225 [details] [associations]
symbol:BRG3 "BOI-related gene 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043067 "regulation of programmed cell death"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0005634 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
GO:GO:0043067 EMBL:AB026645 InterPro:IPR017066 PIRSF:PIRSF036836
EMBL:BT006236 EMBL:AK118454 IPI:IPI00541374 RefSeq:NP_566438.1
UniGene:At.39524 ProteinModelPortal:Q9LDD1 SMR:Q9LDD1
EnsemblPlants:AT3G12920.1 GeneID:820477 KEGG:ath:AT3G12920
TAIR:At3g12920 InParanoid:Q9LDD1 OMA:CVENQIW PhylomeDB:Q9LDD1
ProtClustDB:CLSN2914979 Genevestigator:Q9LDD1 Uniprot:Q9LDD1
Length = 335
Score = 348 (127.6 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 92/236 (38%), Positives = 137/236 (58%)
Query: 43 MAVEARRIDLLPSQLISHRDFIKSNQVNANTQMD-SFFPFAEPMPE-QTMLPFYQAFDCN 100
MAVEA ++ L S ++++ V NTQM P P E QT L F ++ +
Sbjct: 1 MAVEAHHLNPLFSSNREMIHPVEASGVVYNTQMRYGTVPTFNPTVECQTSL-FNPIYNIS 59
Query: 101 PI------STKTSMDKADSGLTYNI--------P-APRKRQRDSINDLDAFSLVSQKQKL 145
P+ S K ++ DS LT+N P + RKR R+ L+ + + ++
Sbjct: 60 PVDRLVHQSMKPTIQSVDSSLTFNSDNNVDFLRPVSSRKRSREESVVLNPSAYMQIQKNP 119
Query: 146 SGFSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKL 205
+ L QD+ +QQ +IDR I+ H E++ +E+EE+RK Q R ++ A+++G+ L
Sbjct: 120 TDPLMFLGQDLSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTL 179
Query: 206 KEKDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQVLAHV 261
+ KD+EI+ + KLN L+E+VKSL VENQIWRD+AQ+NEAT N LRSNL+QVLA V
Sbjct: 180 RAKDDEINHIGKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAV 235
Score = 201 (75.8 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 42/71 (59%), Positives = 50/71 (70%)
Query: 294 RSTIAGEGAQD--KAVGGGRMLCRRCGEKESSVLLLPCRHLCLCTVCGSCLIGSCPVCNF 351
R +AGE AQD K G +CR CG+ E+SVLLLPCRH+CLC+VCGS L +CP+C
Sbjct: 266 RWKLAGE-AQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCSVCGSSL-NTCPICKS 323
Query: 352 VVDASLHVNLS 362
ASLHVNLS
Sbjct: 324 PKTASLHVNLS 334
>TAIR|locus:2207385 [details] [associations]
symbol:BRG2 "BOI-related gene 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043067 "regulation of programmed cell
death" evidence=IMP] InterPro:IPR001841 PROSITE:PS50089
EMBL:CP002684 GO:GO:0008270 GO:GO:0043067 IPI:IPI00526648
RefSeq:NP_565200.1 UniGene:At.34179 ProteinModelPortal:F4IDI6
SMR:F4IDI6 EnsemblPlants:AT1G79110.1 GeneID:844252
KEGG:ath:AT1G79110 OMA:RTIMEAI Uniprot:F4IDI6
Length = 358
Score = 477 (173.0 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 108/224 (48%), Positives = 138/224 (61%)
Query: 148 FSSL-LDQDIIFRLQQQQSEIDRYIAQHT---EKVILELEEQRKRQSRMLISAIQEGVAN 203
FS L D DI + QQQ EIDR+++ H E+V E+EE+RKRQ+R ++ AI++G+
Sbjct: 136 FSFLGQDIDISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVK 195
Query: 204 KLKEKDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQVLAHVXX 263
+L+ K+EE R+ K+N L+ERVKSL +ENQIWRDLAQTNEATAN LR+NLE VLA V
Sbjct: 196 RLRVKEEERERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKD 255
Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFGRSTI---AG--EGAQDKAVGGGRMLCRRCG 318
G T+ G AQDKA R +CR CG
Sbjct: 256 VSRGAGLEKNMNEEDDAESCCGSSCGGG-GEETVRRRVGLEREAQDKAERRRRRMCRNCG 314
Query: 319 EKESSVLLLPCRHLCLCTVCGSCLIGSCPVCNFVVDASLHVNLS 362
E+ES VLLLPCRHLCLC VCGS + +CP+C +AS+HVN+S
Sbjct: 315 EEESCVLLLPCRHLCLCGVCGSS-VHTCPICTSPKNASVHVNMS 357
Score = 52 (23.4 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 43 MAVEARRIDLLPSQLISHRDFIKSN 67
MAV+A + L P QL S+R+ +N
Sbjct: 1 MAVDAHHLFLSPPQLFSNRELTMNN 25
>TAIR|locus:2019983 [details] [associations]
symbol:AT1G10650 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 InterPro:IPR017066
PIRSF:PIRSF036836 ProtClustDB:CLSN2681809 EMBL:BT002880
EMBL:BT004404 EMBL:DQ059088 IPI:IPI00518440 RefSeq:NP_172535.1
UniGene:At.43660 ProteinModelPortal:Q84JF9 SMR:Q84JF9
EnsemblPlants:AT1G10650.1 GeneID:837608 KEGG:ath:AT1G10650
TAIR:At1g10650 InParanoid:Q84JF9 OMA:DDDEHNS PhylomeDB:Q84JF9
ArrayExpress:Q84JF9 Genevestigator:Q84JF9 Uniprot:Q84JF9
Length = 339
Score = 186 (70.5 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 38/113 (33%), Positives = 67/113 (59%)
Query: 148 FSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKLKE 207
F SL D + L +Q+ E D++I ++ + + ++R ++ +++GV+ KL+E
Sbjct: 135 FQSL-DDSLRIDLHRQKDEFDQFIKIQAAQMAKGVRDMKQRHIASFLTTLEKGVSKKLQE 193
Query: 208 KDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQVLAH 260
KD EI+ M K N L ER+K + +E Q W A+ NE+ N L++NL+Q ++H
Sbjct: 194 KDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKANLQQAMSH 246
Score = 116 (45.9 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 311 RMLCRRCGEKESSVLLLPCRHLCLCTVCGSCLIGSCPVCNFVVDASLHVNLS 362
RM C+ C KE SVL++PCRHL LC C CPVC + + + V S
Sbjct: 289 RMRCKMCNVKEVSVLIVPCRHLSLCKEC-DVFTKICPVCKSLKSSCVQVFFS 339
Score = 44 (20.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 16/66 (24%), Positives = 33/66 (50%)
Query: 142 KQK-LSGFSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEG 200
KQ+ ++ F + L++ + +LQ++ EI+ ++ E V + + Q+ + E
Sbjct: 172 KQRHIASFLTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNES 231
Query: 201 VANKLK 206
V N LK
Sbjct: 232 VVNVLK 237
>TAIR|locus:2036596 [details] [associations]
symbol:AT1G60610 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 InterPro:IPR017066
PIRSF:PIRSF036836 EMBL:DQ059101 EMBL:BT028996 EMBL:AK229278
IPI:IPI00537724 RefSeq:NP_001117519.1 RefSeq:NP_176260.1
RefSeq:NP_974055.1 UniGene:At.43636 ProteinModelPortal:Q4TU35
SMR:Q4TU35 DNASU:842355 EnsemblPlants:AT1G60610.1
EnsemblPlants:AT1G60610.2 EnsemblPlants:AT1G60610.3 GeneID:842355
KEGG:ath:AT1G60610 TAIR:At1g60610 InParanoid:Q4TU35 OMA:NYLNIPG
PhylomeDB:Q4TU35 ProtClustDB:CLSN2681809 ArrayExpress:Q4TU35
Genevestigator:Q4TU35 Uniprot:Q4TU35
Length = 340
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 68/217 (31%), Positives = 104/217 (47%)
Query: 148 FSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKLKE 207
+ SL D +I L +Q E+D++I +++ + + ++R ++A+++ V+ KL+E
Sbjct: 134 YQSLGD-NIRLDLNRQNDELDQFIKFRADQMAKGVRDIKQRHVTSFVTALEKDVSKKLQE 192
Query: 208 KDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQVLAHVXXXXXX 267
KD EI M K N L +++K + VE Q W A+ NE+ N L+ NL+QV++H
Sbjct: 193 KDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALKVNLQQVMSH------- 245
Query: 268 XXXXXXXXXXXXXXXXXXXXXXXXFGRSTIAGEGAQDKAVG-GGR----MLCRRCGEKES 322
FG S I E A + G M C+ C K
Sbjct: 246 ----GNDNNAVGGGVADHHQMKEGFGDSEIDDEAASYNYLNIPGMPSTGMRCKLCNVKNV 301
Query: 323 SVLLLPCRHLCLCTVCGSCLIGSCPVCNFVVDASLHV 359
SVLL+PCRHL LC C G CPVC + +S+ V
Sbjct: 302 SVLLVPCRHLSLCKDC-DVFTGVCPVCQSLKTSSVQV 337
>TAIR|locus:2825812 [details] [associations]
symbol:SBP1 "S-ribonuclease binding protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001841 PROSITE:PS50089 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008270 EMBL:AC083835
InterPro:IPR017066 PIRSF:PIRSF036836 EMBL:AF324720 EMBL:AF329502
EMBL:AF349529 EMBL:AY070470 EMBL:AY093744 EMBL:AK221737
IPI:IPI00527240 PIR:B96511 RefSeq:NP_175141.1 UniGene:At.16918
ProteinModelPortal:Q9FEA0 SMR:Q9FEA0 EnsemblPlants:AT1G45976.1
GeneID:841106 KEGG:ath:AT1G45976 TAIR:At1g45976 eggNOG:NOG319202
HOGENOM:HOG000005672 InParanoid:Q9FEA0 OMA:YIPPFHV PhylomeDB:Q9FEA0
ProtClustDB:CLSN2681904 ArrayExpress:Q9FEA0 Genevestigator:Q9FEA0
Uniprot:Q9FEA0
Length = 325
Score = 162 (62.1 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 36/111 (32%), Positives = 65/111 (58%)
Query: 146 SGFSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKL 205
S SL+ DI LQ+Q ++IDR++ +++ + ++ KR + +S ++E V KL
Sbjct: 129 SALLSLVGDDIDRELQRQDADIDRFLKIQGDQLRHAILDKIKRGQQKTVSLMEEKVVQKL 188
Query: 206 KEKDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQ 256
+EKDEE+ R+ + N L+ R++ L +E + W+ A+ NE L NL++
Sbjct: 189 REKDEELERINRKNKELEVRMEQLTMEAEAWQQRAKYNENMIAALNYNLDR 239
Score = 122 (48.0 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 312 MLCRRCGEKESSVLLLPCRHLCLCTVCGSCLIGSCPVC 349
M+CR CG +E +LLLPC H+CLC C L SCP+C
Sbjct: 277 MMCRFCGVREMCMLLLPCNHMCLCKECERKL-SSCPLC 313
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 113 SGLTYNIPAPRKRQRDSI 130
+ L YN+ + R RDSI
Sbjct: 231 AALNYNLDRAQGRPRDSI 248
>TAIR|locus:2131571 [details] [associations]
symbol:AT4G35070 "AT4G35070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR
InterPro:IPR017066 PIRSF:PIRSF036836 EMBL:BT015338 EMBL:BT015642
EMBL:AK229374 IPI:IPI00516917 RefSeq:NP_195233.2 UniGene:At.31449
UniGene:At.74249 ProteinModelPortal:Q66GR4 SMR:Q66GR4
EnsemblPlants:AT4G35070.1 GeneID:829659 KEGG:ath:AT4G35070
TAIR:At4g35070 HOGENOM:HOG000239115 InParanoid:Q66GR4 OMA:KNMELED
PhylomeDB:Q66GR4 ProtClustDB:CLSN2680272 Genevestigator:Q66GR4
Uniprot:Q66GR4
Length = 265
Score = 170 (64.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 32/99 (32%), Positives = 62/99 (62%)
Query: 159 RLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKLKEKDEEIHRMRKL 218
++++Q+ EID++I E++ L+EQRKR+ M++ ++ + +K+EE+ +
Sbjct: 77 QMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLLMSQKEEEMSKALNK 136
Query: 219 NWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQV 257
N L++ ++ + +ENQ W+ +A+ NEA TL + LEQV
Sbjct: 137 NMELEDLLRKMEMENQTWQRMARENEAIVQTLNTTLEQV 175
Score = 101 (40.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 314 CRRCGEKE-SSVLLLPCRHLCLCTVCGSCLIGSCPVCN 350
C CG + VL LPCRHLC C C L+ CP+CN
Sbjct: 217 CCNCGSNGVTRVLFLPCRHLCCCMDCEEGLL-LCPICN 253
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/98 (19%), Positives = 51/98 (52%)
Query: 124 KRQRDSINDLDAFSLVSQKQKLSGFSSLLDQDIIFRLQQQQS-EIDRYIAQHTEKVILEL 182
++Q+ A + QKQ++ F + ++ + + LQ+Q+ E++ + + K +L +
Sbjct: 64 QQQQSPSQSFLAAQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLLM 123
Query: 183 EEQRKRQSRMLISAIQ-EGVANKLKEKDEEIHRMRKLN 219
++ + S+ L ++ E + K++ +++ RM + N
Sbjct: 124 SQKEEEMSKALNKNMELEDLLRKMEMENQTWQRMAREN 161
>TAIR|locus:2035564 [details] [associations]
symbol:AT1G32740 "AT1G32740" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
UniGene:At.40077 UniGene:At.48257 InterPro:IPR017066
PIRSF:PIRSF036836 HOGENOM:HOG000239367 EMBL:AY086544
IPI:IPI00524994 RefSeq:NP_564408.1 ProteinModelPortal:Q8LCK5
SMR:Q8LCK5 PRIDE:Q8LCK5 EnsemblPlants:AT1G32740.1 GeneID:840168
KEGG:ath:AT1G32740 TAIR:At1g32740 eggNOG:NOG247999
InParanoid:Q8LCK5 OMA:CREREAT PhylomeDB:Q8LCK5
ProtClustDB:CLSN2719980 Genevestigator:Q8LCK5 Uniprot:Q8LCK5
Length = 312
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 62/222 (27%), Positives = 106/222 (47%)
Query: 133 LDAFSLVSQKQKLSGFSSLLDQDIIF-RLQQQQSEIDRYIAQHTEKVILELEEQRKRQSR 191
L FS Q QK+S S +D+ + +Q E+D ++ E++ L E+RK +
Sbjct: 97 LRLFSGEDQAQKISHLS----EDVFAAHINRQSEELDEFLHAQAEELRRTLAEKRKMHYK 152
Query: 192 MLISAIQEGVANKLKEKDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLR 251
L+ A++E + KL+EK+ EI R + + L R L E Q+W++ A+ +E A +L+
Sbjct: 153 ALLGAVEESLVRKLREKEVEIERATRRHNELVARDSQLRAEVQVWQERAKAHEDAAASLQ 212
Query: 252 SNLEQVLAHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGRSTIAG-EGAQDKAVGGG 310
S L+Q + +TI+G + A+ V
Sbjct: 213 SQLQQAVNQCAGGCVSAQDSRAAEEGLLC--------------TTISGVDDAESVYVDPE 258
Query: 311 RML---CRRCGEKESSVLLLPCRHLCLCTVCGSCLIGSCPVC 349
R+ C+ C E+E++V++LPCRHL +C C + +CP+C
Sbjct: 259 RVKRPNCKACREREATVVVLPCRHLSICPGCDRTAL-ACPLC 299
>TAIR|locus:2129336 [details] [associations]
symbol:AT4G17680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002687 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031347 InterPro:IPR017066
PIRSF:PIRSF036836 EMBL:AY133711 IPI:IPI00528560 RefSeq:NP_193503.2
UniGene:At.32978 ProteinModelPortal:Q8L7G9 SMR:Q8L7G9 IntAct:Q8L7G9
EnsemblPlants:AT4G17680.1 GeneID:827488 KEGG:ath:AT4G17680
TAIR:At4g17680 HOGENOM:HOG000239367 InParanoid:Q8L7G9 OMA:YVELLCA
PhylomeDB:Q8L7G9 ProtClustDB:CLSN2690986 Genevestigator:Q8L7G9
Uniprot:Q8L7G9
Length = 314
Score = 212 (79.7 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 72/284 (25%), Positives = 125/284 (44%)
Query: 86 PEQTMLPFYQAFDCNPISTKTSMDKADSGLTYNIPAPRKRQRDSINDL--DAFSLVS--- 140
P+ T PF S K S + S L N P P+ Q I +L ++VS
Sbjct: 45 PQDT--PFTNFTKAGVDSRKRSREVYSSALM-NPPPPKPSQVIDITELLQKTPNVVSTGL 101
Query: 141 -----QKQKLSGFSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLIS 195
Q Q F S L D+ ++++Q+ E+DR+I E++ L + R+R+ L+
Sbjct: 102 RLFHDQSQNQQQFFSSLPGDVTGKIKRQRDELDRFIQTQGEELRRTLADNRERRYVELLC 161
Query: 196 AIQEGVANKLKEKDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLE 255
A +E V KL++K+ E+ + + + L+ RV + E + W+ A T EA ++L ++L+
Sbjct: 162 AAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEARNWQLRAATREAEVSSLHAHLQ 221
Query: 256 QVLAHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGRSTIAGEGAQDKAVGGGRMLCR 315
Q +A+ ++ + + + +G CR
Sbjct: 222 QAIANRLDTAAKQSTFGEDGGDAEEAEDA----------ESVYVDPERIELIGPS---CR 268
Query: 316 RCGEKESSVLLLPCRHLCLCTVCGSCLIGSCPVCNFVVDASLHV 359
C K ++V+ LPC+HL LC C + CP+C V + + V
Sbjct: 269 ICRRKSATVMALPCQHLILCNGCDVGAVRVCPICLAVKTSGVEV 312
>TAIR|locus:2171042 [details] [associations]
symbol:AT5G47050 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
EMBL:AB013394 InterPro:IPR017066 PIRSF:PIRSF036836
HOGENOM:HOG000239367 EMBL:AY063791 EMBL:AY091288 IPI:IPI00524000
RefSeq:NP_199516.1 UniGene:At.24049 ProteinModelPortal:Q9FJQ8
SMR:Q9FJQ8 EnsemblPlants:AT5G47050.1 GeneID:834751
KEGG:ath:AT5G47050 TAIR:At5g47050 eggNOG:NOG248471
InParanoid:Q9FJQ8 OMA:ICRRRSA PhylomeDB:Q9FJQ8
ProtClustDB:CLSN2914888 ArrayExpress:Q9FJQ8 Genevestigator:Q9FJQ8
Uniprot:Q9FJQ8
Length = 300
Score = 138 (53.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 140 SQKQKLSGFSSLLDQDIIFRLQQQQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQE 199
SQ Q+ S + D+ ++ Q E++R++ E++ L E +R R L+ +E
Sbjct: 90 SQNQEQRFLSFPITGDVAGEIKSQTDELNRFLQIQGEQLKRMLAENSERNYRELLRTTEE 149
Query: 200 GVANKLKEKDEEIHRMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQ--V 257
V +L+EK+ EI + + + L+ R + E + W+ A EA A +L++ L Q V
Sbjct: 150 SVRRRLREKEAEIEKATRRHVELEARATQIETEARAWQMRAAAREAEATSLQAQLHQAVV 209
Query: 258 LAH 260
+AH
Sbjct: 210 VAH 212
Score = 109 (43.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 314 CRRCGEKESSVLLLPCRHLCLCTVC-GSCLIGSCPVCNFVVDASLHV 359
CR C + ++VL LPCRHL +CT C GS I CP+C ++S+ V
Sbjct: 253 CRICRRRSATVLALPCRHLVMCTECDGSVRI--CPLCLSTKNSSVEV 297
>TAIR|locus:2054224 [details] [associations]
symbol:AT2G12290 "AT2G12290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005897
EMBL:BT029361 IPI:IPI00523448 PIR:E84502 RefSeq:NP_178930.1
UniGene:At.50887 IntAct:Q9ZUP8 DNASU:815700
EnsemblPlants:AT2G12290.1 GeneID:815700 KEGG:ath:AT2G12290
TAIR:At2g12290 eggNOG:KOG1100 PhylomeDB:Q9ZUP8 ArrayExpress:Q9ZUP8
Genevestigator:Q9ZUP8 Uniprot:Q9ZUP8
Length = 133
Score = 174 (66.3 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 214 RMRKLNWVLQERVKSLFVENQIWRDLAQTNEATANTLRSNLEQVLAHV 261
R+R LNWVLQE+VKSL+VE QIWR + QTN+A NTLR+NL+QVLA +
Sbjct: 28 RIRNLNWVLQEKVKSLYVEYQIWRGIDQTNKANPNTLRTNLDQVLAQL 75
>TAIR|locus:2014089 [details] [associations]
symbol:AT1G18470 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR019396
Pfam:PF10269 EMBL:AY087249 EMBL:BT030383 IPI:IPI00523865
RefSeq:NP_564052.1 UniGene:At.27535 UniGene:At.41793
ProteinModelPortal:Q8LBF1 SMR:Q8LBF1 EnsemblPlants:AT1G18470.1
GeneID:838427 KEGG:ath:AT1G18470 TAIR:At1g18470 eggNOG:NOG129450
HOGENOM:HOG000005785 InParanoid:Q8LBF1 OMA:ICRIDIE PhylomeDB:Q8LBF1
ProtClustDB:CLSN2687854 Genevestigator:Q8LBF1 Uniprot:Q8LBF1
Length = 467
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 311 RMLCRRCGEKESSVLLLPCRHLCLCTVCGS-CLIGSCPVCNFVVDASLHV 359
++LCR C EK+ S++LLPCRH LC C C +CP+C ++ L V
Sbjct: 417 KVLCRVCFEKDISLVLLPCRHRVLCRTCADKCT--TCPICRIDIEKRLSV 464
>TAIR|locus:2031471 [details] [associations]
symbol:AT1G73950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005773 "vacuole" evidence=IDA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 GO:GO:0016021
EMBL:CP002684 GO:GO:0005773 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR019396
Pfam:PF10269 IPI:IPI00529391 RefSeq:NP_177535.2 UniGene:At.28475
ProteinModelPortal:F4HS21 SMR:F4HS21 PRIDE:F4HS21
EnsemblPlants:AT1G73950.1 GeneID:843732 KEGG:ath:AT1G73950
OMA:LAFEVII Uniprot:F4HS21
Length = 466
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 311 RMLCRRCGEKESSVLLLPCRHLCLCTVCGS-CLIGSCPVCNFVVDASLHV 359
++LCR C E+E SV+LLPCRH LC C C CP C ++ L V
Sbjct: 416 KVLCRVCFEREISVVLLPCRHRVLCRNCSDKCK--KCPFCRITIEERLPV 463
>UNIPROTKB|Q3SX32 [details] [associations]
symbol:M6PRBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
GO:GO:0043231 GO:GO:0005811 InterPro:IPR004279 PANTHER:PTHR14024
Pfam:PF03036 PIRSF:PIRSF036881 GeneTree:ENSGT00500000044795
HOGENOM:HOG000033816 HOVERGEN:HBG002935 CTD:10226 eggNOG:NOG81115
OMA:FAPGITE OrthoDB:EOG41ZFB4 EMBL:DAAA02019596 EMBL:BC104531
EMBL:BT025413 EMBL:BT026183 IPI:IPI00700098 RefSeq:NP_001070514.1
UniGene:Bt.21743 SMR:Q3SX32 STRING:Q3SX32
Ensembl:ENSBTAT00000015669 GeneID:767984 KEGG:bta:767984
InParanoid:Q3SX32 NextBio:20918339 Uniprot:Q3SX32
Length = 438
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 106 TSMDKADSGLTYNIP---APRKRQRDSINDLDAFSLVSQKQKLSGFSSLLDQDIIFRLQQ 162
T + K++ + ++P A R S+ D S+ Q+Q+ S F L + RL+Q
Sbjct: 195 TVLGKSEEWVDNHLPMTDAELARLATSLEGFDIASVAQQRQEQSYFVRL--GSLSERLRQ 252
Query: 163 QQSEIDRYIAQHTEKVILELEEQRKRQSRMLISAIQEGVANKLKEKDEEIHRM------R 216
+ E Q+T + E Q Q+ +L+ I++GV KL E E++H+M +
Sbjct: 253 RAYEHSLGKLQNTRQRAQEALHQLS-QTLILMETIKQGVDQKLVEGQEKLHQMWLGWNQK 311
Query: 217 KLNWVLQERVKSLFVENQ---IWRDLAQTNEATANTLRSNLEQVLAHV 261
+L + K VE+Q ++RD+ Q + T +L S L+ + AH+
Sbjct: 312 RLQGPEENAAKPEQVESQTLAMFRDITQQLQTTCASLGSGLQGLPAHI 359
>ZFIN|ZDB-GENE-060526-97 [details] [associations]
symbol:lrsam1 "leucine rich repeat and sterile alpha
motif containing 1" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048666 "neuron development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR001611 PROSITE:PS50089
PROSITE:PS51450 SMART:SM00184 ZFIN:ZDB-GENE-060526-97 GO:GO:0046872
GO:GO:0008270 eggNOG:COG4886 GO:GO:0048666 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 InterPro:IPR025875
Pfam:PF12799 EMBL:CR925757 GeneTree:ENSGT00700000104506 CTD:90678
HOGENOM:HOG000231972 HOVERGEN:HBG052363 KO:K10641 OMA:FGAFATC
OrthoDB:EOG4G7BZ3 IPI:IPI00481185 RefSeq:NP_001093474.1
UniGene:Dr.92933 Ensembl:ENSDART00000085769 GeneID:562066
KEGG:dre:562066 InParanoid:A2CF42 NextBio:20884231 Uniprot:A2CF42
Length = 721
Score = 102 (41.0 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 314 CRRCGEKESSVLLLPCRHLCLCTVCGSCLIGSCPVC 349
C C E ES V+ LPC H+C C C L SCP+C
Sbjct: 674 CVVCMELESQVIFLPCGHVCCCQTCSDAL-QSCPLC 708
Score = 57 (25.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 115 LTYNIPAPRKRQRDSINDLDAFSLVSQKQKLSGFSSLLDQDIIF--RLQQQQSEI---DR 169
+ Y +K+ I + D + KL +S L +D++ +L+Q++ E+ +
Sbjct: 246 MDYEKRKEQKQLEKLIFEKDLEEKQREHAKLLVLNSSLKEDVLLSVKLEQERLELGVSQQ 305
Query: 170 YIAQHTEKVILELEEQRKRQSRML--ISAI------QEGVANKLKEKDEEIHRMRKLNWV 221
AQ E++ + L++ R+ +S ++ IS + QE A L+ +++ RM L +
Sbjct: 306 QKAQEAERLKV-LDKVRQAESAVMSRISDLLLDNKRQEKSAAFLQALEKDRIRMEHLTTI 364
Query: 222 LQERVKSL 229
QE SL
Sbjct: 365 TQEEANSL 372
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 362 292 0.00090 115 3 11 22 0.49 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 609 (65 KB)
Total size of DFA: 200 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.31u 0.14s 31.45t Elapsed: 00:00:01
Total cpu time: 31.31u 0.14s 31.45t Elapsed: 00:00:01
Start: Fri May 10 12:24:21 2013 End: Fri May 10 12:24:22 2013