Query 018029
Match_columns 362
No_of_seqs 353 out of 1810
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 08:46:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ep6_A MCTP2 protein; beta san 99.9 1.6E-21 5.5E-26 162.6 14.9 120 7-126 6-131 (133)
2 3kwu_A MUNC13-1; calcium bindi 99.9 6.8E-21 2.3E-25 161.6 18.0 117 10-126 13-146 (148)
3 2fk9_A Protein kinase C, ETA t 99.8 6.8E-21 2.3E-25 163.9 12.6 114 11-126 26-156 (157)
4 1wfj_A Putative elicitor-respo 99.8 3.3E-20 1.1E-24 155.0 14.0 120 10-129 6-132 (136)
5 2dmh_A Myoferlin; beta-sandwic 99.8 8.8E-20 3E-24 153.2 16.7 119 10-129 3-135 (140)
6 1gmi_A Protein kinase C, epsil 99.8 3.2E-20 1.1E-24 155.5 13.2 114 12-127 4-133 (136)
7 3b7y_A E3 ubiquitin-protein li 99.8 1E-19 3.4E-24 155.2 16.1 117 10-126 16-152 (153)
8 3m7f_B E3 ubiquitin-protein li 99.8 2.5E-19 8.4E-24 156.7 16.3 120 9-128 3-142 (176)
9 1rlw_A Phospholipase A2, CALB 99.8 1.9E-19 6.3E-24 148.3 14.1 114 12-127 1-123 (126)
10 3pyc_A E3 ubiquitin-protein li 99.8 4.2E-19 1.4E-23 147.7 15.5 112 12-124 3-130 (132)
11 2b3r_A Phosphatidylinositol-4- 99.8 1.8E-18 6E-23 144.7 13.7 103 12-115 18-131 (134)
12 2r83_A Synaptotagmin-1; C2A-C2 99.8 4.8E-18 1.6E-22 159.0 18.1 166 11-187 16-204 (284)
13 2z0u_A WW domain-containing pr 99.8 8.8E-19 3E-23 150.4 10.6 103 12-114 41-155 (155)
14 3f04_A Synaptotagmin-1; C2A, c 99.8 1.3E-18 4.3E-23 146.7 11.2 103 12-114 32-142 (143)
15 2nq3_A Itchy homolog E3 ubiqui 99.8 3E-18 1E-22 149.8 13.7 116 12-128 34-162 (173)
16 1rsy_A Synaptotagmin I; calciu 99.8 2.7E-18 9.1E-23 146.5 12.9 103 12-114 40-150 (152)
17 2bwq_A Regulating synaptic mem 99.8 2.2E-18 7.5E-23 142.5 11.8 103 11-113 15-129 (129)
18 3fdw_A Synaptotagmin-like prot 99.8 1.1E-18 3.8E-23 148.1 10.0 105 12-116 21-136 (148)
19 2d8k_A Synaptotagmin VII; exoc 99.8 3.9E-18 1.3E-22 143.4 13.1 104 12-115 24-136 (141)
20 3rdl_A Protein kinase C alpha 99.8 2.4E-18 8.3E-23 143.6 11.7 102 13-114 15-124 (137)
21 1a25_A CALB, protein kinase C 99.8 3.5E-18 1.2E-22 145.2 12.2 102 13-114 30-139 (149)
22 1rh8_A Piccolo protein; beta-s 99.8 1.1E-18 3.9E-23 146.7 8.4 105 13-117 17-141 (142)
23 1v27_A Regulating synaptic mem 99.7 4E-18 1.4E-22 142.9 10.4 103 12-114 19-133 (141)
24 2q3x_A Regulating synaptic mem 99.7 5E-18 1.7E-22 147.9 11.1 103 13-115 29-140 (171)
25 3fbk_A RGS3, RGP3, regulator o 99.7 9.4E-18 3.2E-22 143.3 12.6 103 12-115 25-138 (153)
26 1wfm_A Synaptotagmin XIII; C2 99.7 1.4E-17 4.7E-22 139.8 13.0 101 12-115 24-133 (138)
27 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.3E-17 4.6E-22 139.6 12.8 104 12-115 20-134 (138)
28 2chd_A Rabphilin-3A, exophilin 99.7 1E-17 3.5E-22 140.9 11.8 103 12-114 27-140 (142)
29 3n5a_A Synaptotagmin-7; calciu 99.7 2.1E-18 7.3E-23 144.0 7.3 108 11-118 13-128 (138)
30 2cm5_A Rabphilin-3A; protein t 99.7 3.2E-18 1.1E-22 148.1 8.6 107 12-118 35-149 (166)
31 2dmg_A KIAA1228 protein; beta- 99.7 7.4E-18 2.5E-22 141.8 10.0 105 12-117 22-138 (142)
32 1dqv_A Synaptotagmin III; beta 99.7 3E-17 1E-21 155.0 15.1 166 11-187 17-206 (296)
33 1tjx_A Similar to synaptotagmi 99.7 3.8E-17 1.3E-21 140.2 13.3 92 12-103 23-122 (159)
34 1w15_A Synaptotagmin IV; metal 99.7 7.5E-18 2.6E-22 143.6 8.8 106 12-117 28-141 (153)
35 2enp_A B/K protein; C2 type 1, 99.7 1.3E-17 4.5E-22 141.2 9.6 104 12-115 24-142 (147)
36 3nsj_A Perforin-1; pore formin 99.7 4E-16 1.4E-20 158.4 15.9 111 13-128 393-505 (540)
37 3jzy_A Intersectin 2; C2 domai 99.7 3.6E-16 1.2E-20 158.0 14.8 115 12-126 385-507 (510)
38 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.2E-15 4.1E-20 127.1 12.1 86 11-102 2-88 (131)
39 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.2E-15 4E-20 132.5 12.4 87 10-102 10-97 (167)
40 2r83_A Synaptotagmin-1; C2A-C2 99.6 1.4E-14 4.7E-19 135.4 13.7 91 12-102 148-246 (284)
41 1djx_A PLC-D1, phosphoinositid 99.5 8.8E-14 3E-18 143.9 16.5 106 12-118 495-609 (624)
42 1cjy_A CPLA2, protein (cytosol 99.5 1.8E-14 6.1E-19 150.7 10.8 104 11-115 15-127 (749)
43 3l9b_A Otoferlin; C2-domain, b 99.5 1.3E-13 4.6E-18 114.9 13.4 115 9-128 16-141 (144)
44 1dqv_A Synaptotagmin III; beta 99.5 3E-15 1E-19 141.3 1.4 103 12-114 150-261 (296)
45 3bxj_A RAS GTPase-activating p 99.4 1.7E-14 5.9E-19 145.2 -0.7 98 11-113 8-115 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.4 8E-13 2.7E-17 138.2 9.8 102 13-114 171-280 (674)
47 3ohm_B 1-phosphatidylinositol- 99.1 4.4E-10 1.5E-14 119.5 14.8 107 13-128 724-846 (885)
48 3qr0_A Phospholipase C-beta (P 99.1 4.6E-10 1.6E-14 118.6 14.9 106 13-127 649-771 (816)
49 2zkm_X 1-phosphatidylinositol- 99.1 1.1E-09 3.6E-14 116.1 15.0 98 12-118 676-784 (799)
50 1yrk_A NPKC-delta, protein kin 99.0 7.2E-09 2.5E-13 84.0 14.7 108 13-126 5-124 (126)
51 2enj_A NPKC-theta, protein kin 99.0 7.3E-09 2.5E-13 85.1 12.5 112 11-128 7-131 (138)
52 2hth_B Vacuolar protein sortin 96.5 0.034 1.1E-06 46.0 11.9 90 192-284 39-131 (140)
53 2cay_A VPS36 PH domain, vacuol 95.2 0.12 4.2E-06 42.8 9.5 84 192-284 52-135 (145)
54 1pfj_A TFIIH basal transcripti 92.4 0.74 2.5E-05 36.0 8.6 96 173-285 5-104 (108)
55 3l4c_A Dedicator of cytokinesi 89.8 9.3 0.00032 33.6 14.1 56 47-102 78-140 (220)
56 2wxf_A Phosphatidylinositol-4, 89.8 2.7 9.2E-05 45.1 12.6 87 13-102 216-324 (940)
57 2yf0_A Myotubularin-related pr 86.7 2 6.8E-05 42.9 8.6 52 189-243 23-74 (512)
58 3hhm_A Phosphatidylinositol-4, 85.0 6.7 0.00023 42.6 12.1 88 13-102 354-455 (1091)
59 1lw3_A Myotubularin-related pr 84.7 5 0.00017 41.1 10.5 72 170-243 80-160 (657)
60 1e7u_A Phosphatidylinositol 3- 83.2 9.6 0.00033 40.9 12.4 88 14-102 218-330 (961)
61 1zsq_A Myotubularin-related pr 82.2 6 0.00021 39.5 9.8 54 190-243 31-88 (528)
62 2y3a_A Phosphatidylinositol-4, 75.5 4 0.00014 44.4 6.6 87 13-102 352-470 (1092)
63 1t77_A Lipopolysaccharide-resp 58.8 12 0.00042 36.1 5.5 65 180-244 6-85 (414)
64 2yrb_A Protein fantom; beta sa 58.6 57 0.0019 27.0 8.9 90 11-102 15-116 (156)
65 3fss_A Histone chaperone RTT10 50.4 62 0.0021 28.6 8.1 68 192-280 166-233 (237)
66 1ou8_A Stringent starvation pr 43.6 31 0.0011 26.8 4.6 38 193-230 60-97 (111)
67 1yfn_A Stringent starvation pr 41.7 34 0.0012 26.9 4.6 37 193-229 61-97 (118)
68 1ou9_A Stringent starvation pr 40.4 36 0.0012 27.2 4.6 38 193-230 60-97 (129)
69 2gcl_A Hypothetical 63.0 kDa p 37.9 87 0.003 28.1 7.4 79 180-282 166-249 (261)
70 1w7p_D VPS36P, YLR417W; ESCRT- 36.8 7.3 0.00025 39.2 0.0 39 193-231 45-83 (566)
71 3f5r_A FACT complex subunit PO 35.2 2.1E+02 0.0072 24.3 9.8 77 190-284 35-117 (191)
72 1zyi_A Methylosome subunit pic 29.8 60 0.0021 27.2 4.6 57 184-243 35-93 (171)
73 1fao_A Dual adaptor of phospho 28.7 1.8E+02 0.0063 21.7 9.1 44 198-241 42-85 (126)
74 1y5o_A TFB1, RNA polymerase II 22.9 2.7E+02 0.0092 21.6 10.8 47 192-242 13-65 (115)
75 2cod_A Centaurin-delta 1; ARF 20.8 2.5E+02 0.0086 20.5 6.7 39 199-241 34-72 (115)
No 1
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.87 E-value=1.6e-21 Score=162.65 Aligned_cols=120 Identities=23% Similarity=0.419 Sum_probs=108.5
Q ss_pred CCCCCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeeccccCCCCCeeccEEEEEecCCCcEEEEEEEEcCCC
Q 018029 7 DPQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDII 86 (362)
Q Consensus 7 ~~~~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~ 86 (362)
.......+.|.|+|++|++|+.++..|.+||||++.++.+.++|+++++++||.|+|+|.|.+.+....|.|+|||+|..
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 44556789999999999999999999999999999999999999999999999999999999987778899999999999
Q ss_pred CCCceeEEEEEEeccCCCcceEEEEccC------CCCeeEEEEEEe
Q 018029 87 WKSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTI 126 (362)
Q Consensus 87 ~~ddfIG~~~i~L~~l~~~~~~w~~L~~------~~G~i~l~l~~~ 126 (362)
+++++||++.+++.++..+..+|++|.. ..|++++.+++.
T Consensus 86 ~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 86 KPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp EEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEE
Confidence 8999999999999999767789999974 348888888765
No 2
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.87 E-value=6.8e-21 Score=161.62 Aligned_cols=117 Identities=29% Similarity=0.495 Sum_probs=105.2
Q ss_pred CCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeeccccCCCCCeeccEEEEEecCCCcEEEEEEEEcCCC---
Q 018029 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDII--- 86 (362)
Q Consensus 10 ~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~--- 86 (362)
....+.|.|+|++|++|+++|.+|.+||||++.++...++|+++.+++||.|+|+|.|.+......|.|+|||+|..
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 34469999999999999999999999999999999999999999999999999999999987778999999999985
Q ss_pred --------CCCceeEEEEEEeccCCCcceEEEEccC------CCCeeEEEEEEe
Q 018029 87 --------WKSTVLGSVIVTVESEGQTGAVWYTLDS------PSGQVCLHIKTI 126 (362)
Q Consensus 87 --------~~ddfIG~~~i~L~~l~~~~~~w~~L~~------~~G~i~l~l~~~ 126 (362)
+++++||++.++|.++....+.|++|.+ ..|++++++.+.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 7899999999999999878889999974 348888887764
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.85 E-value=6.8e-21 Score=163.85 Aligned_cols=114 Identities=15% Similarity=0.212 Sum_probs=100.4
Q ss_pred CceeEEEEEEEeeecCCCCCC----------CCCCCcEEEEEECCee-EeeccccCCCCCeeccEEEEEecCCCcEEEEE
Q 018029 11 NSAYLIKLELLAAKNLIGANL----------NGTSDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d~----------~g~sDPyv~i~l~~~~-~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~ 79 (362)
...|.|.|+|++|++|+++|. .|.+||||++.++... .+|+++.+++||.|||+|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 346899999999999999883 2679999999998765 599999999999999999999875 4689999
Q ss_pred EEEcCCCCCCceeEEEEEEeccCC------CcceEEEEccCCCCeeEEEEEEe
Q 018029 80 IYDWDIIWKSTVLGSVIVTVESEG------QTGAVWYTLDSPSGQVCLHIKTI 126 (362)
Q Consensus 80 V~D~d~~~~ddfIG~~~i~L~~l~------~~~~~w~~L~~~~G~i~l~l~~~ 126 (362)
|||+|..+++++||++.++|.++. ...+.|++|.+ .|++++++++.
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-SCEEEEEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-CcEEEEEEEEE
Confidence 999999999999999999999872 45789999987 89999988763
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.84 E-value=3.3e-20 Score=155.03 Aligned_cols=120 Identities=22% Similarity=0.371 Sum_probs=105.5
Q ss_pred CCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeecccc-CCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCC
Q 018029 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK 88 (362)
Q Consensus 10 ~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~-~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~~~ 88 (362)
....+.|.|+|++|++|+.++..|.+||||++.++...++|++++ +++||.|+|+|.|.+.+....|.|+|||++..++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCC
Confidence 456899999999999999999999999999999998889999998 8999999999999998877889999999999999
Q ss_pred CceeEEEEEEeccC---CCcceEEEEccC---CCCeeEEEEEEeecc
Q 018029 89 STVLGSVIVTVESE---GQTGAVWYTLDS---PSGQVCLHIKTIKLP 129 (362)
Q Consensus 89 ddfIG~~~i~L~~l---~~~~~~w~~L~~---~~G~i~l~l~~~~~~ 129 (362)
+++||++.++|.++ +.....|++|.. ..|++++.+.+.+..
T Consensus 86 d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred CceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCC
Confidence 99999999999987 334578999962 237777777776543
No 5
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=8.8e-20 Score=153.15 Aligned_cols=119 Identities=18% Similarity=0.331 Sum_probs=102.6
Q ss_pred CCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeeccccCCCCCeeccEEEEEecC----CCcEEEEEEEEcCC
Q 018029 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDWDI 85 (362)
Q Consensus 10 ~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~~t~nP~W~e~f~f~v~~----~~~~L~~~V~D~d~ 85 (362)
+...+.|.|+|++|++|+.++. |.+||||++.++.++++|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 3 s~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 3 SGSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp SCBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 3567899999999999999998 999999999999889999999999999999999999964 35789999999999
Q ss_pred CCCCceeEEEEEEeccC--CCcceEEEE---ccCC-----CCeeEEEEEEeecc
Q 018029 86 IWKSTVLGSVIVTVESE--GQTGAVWYT---LDSP-----SGQVCLHIKTIKLP 129 (362)
Q Consensus 86 ~~~ddfIG~~~i~L~~l--~~~~~~w~~---L~~~-----~G~i~l~l~~~~~~ 129 (362)
.+++++||++.++|.++ +...+.|+. |... .|++++.+.+.+..
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 99999999999999998 445678988 5432 26777777776543
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.83 E-value=3.2e-20 Score=155.51 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=100.0
Q ss_pred ceeEEEEEEEeeecCCCCCCCCC-----------CCcEEEEEECCee-EeeccccCCCCCeeccEEEEEecCCCcEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGANLNGT-----------SDPYAIITCGSEK-RFSSMVPGSRYPMWGEEFNFSVDELPVQIIVT 79 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~-----------sDPyv~i~l~~~~-~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~ 79 (362)
..+.|.|+|++|++|+++|..++ +||||++.++... .+|+++.+++||.|||+|.|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 46899999999999999886554 9999999998765 5999999999999999999999764 889999
Q ss_pred EEEcCCCCCCceeEEEEEEeccCCC----cceEEEEccCCCCeeEEEEEEee
Q 018029 80 IYDWDIIWKSTVLGSVIVTVESEGQ----TGAVWYTLDSPSGQVCLHIKTIK 127 (362)
Q Consensus 80 V~D~d~~~~ddfIG~~~i~L~~l~~----~~~~w~~L~~~~G~i~l~l~~~~ 127 (362)
|||+|..+++++||++.+++.++.. ..+.|++|.+ .|++++.+++..
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-CeEEEEEEEEEe
Confidence 9999999999999999999998732 2378999987 799999988764
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.83 E-value=1e-19 Score=155.24 Aligned_cols=117 Identities=20% Similarity=0.333 Sum_probs=95.0
Q ss_pred CCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC------eeEeeccccCCCCCeeccEEEEEecCCCcEEEEEEEEc
Q 018029 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDW 83 (362)
Q Consensus 10 ~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~------~~~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D~ 83 (362)
....+.|.|+|++|++|+.+|..|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+|||+
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 456799999999999999999999999999999862 56799999999999999999999987778899999999
Q ss_pred CCCCCCceeEEEEEEeccCCCc--c------eEEEEccCC------CCeeEEEEEEe
Q 018029 84 DIIWKSTVLGSVIVTVESEGQT--G------AVWYTLDSP------SGQVCLHIKTI 126 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l~~~--~------~~w~~L~~~------~G~i~l~l~~~ 126 (362)
|..+++++||++.++|.++... . ..|++|.++ .|+|++.+.+.
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9999999999999999998322 1 489999652 38888887764
No 8
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.82 E-value=2.5e-19 Score=156.68 Aligned_cols=120 Identities=20% Similarity=0.312 Sum_probs=96.8
Q ss_pred CCCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC------eeEeeccccCCCCCeeccEEEEEecCCCcEEEEEEEE
Q 018029 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYD 82 (362)
Q Consensus 9 ~~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~------~~~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D 82 (362)
.....+.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|+|.|.|.+......|.|+|||
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d 82 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFD 82 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEE
Confidence 3456799999999999999999999999999999863 5679999999999999999999998767889999999
Q ss_pred cCCCCCCceeEEEEEEeccCCCc-ce-------EEEEccC------CCCeeEEEEEEeec
Q 018029 83 WDIIWKSTVLGSVIVTVESEGQT-GA-------VWYTLDS------PSGQVCLHIKTIKL 128 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l~~~-~~-------~w~~L~~------~~G~i~l~l~~~~~ 128 (362)
+|..+++++||++.++|.++... .. .||.|.+ ..|+|++.+.+.+.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 99999999999999999998322 12 7999975 24888888888765
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=1.9e-19 Score=148.34 Aligned_cols=114 Identities=20% Similarity=0.357 Sum_probs=96.9
Q ss_pred ceeEEEEEEEeeecCCCC---CCCCCCCcEEEEEECC---eeEeeccccCCCCCeeccEEEEEec-CCCcEEEEEEEEcC
Q 018029 12 SAYLIKLELLAAKNLIGA---NLNGTSDPYAIITCGS---EKRFSSMVPGSRYPMWGEEFNFSVD-ELPVQIIVTIYDWD 84 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~---d~~g~sDPyv~i~l~~---~~~rT~~i~~t~nP~W~e~f~f~v~-~~~~~L~~~V~D~d 84 (362)
+.+.|.|+|++|++|+.+ +..|.+||||++.++. ..++|+++++++||.|||+|.|.+. .....|.|+|||+|
T Consensus 1 S~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d 80 (126)
T 1rlw_A 1 SSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 80 (126)
T ss_dssp CCEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECC
T ss_pred CCcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECC
Confidence 358899999999999984 6679999999999974 7889999999999999999999995 44678999999999
Q ss_pred CCCCCceeEEEEEEeccC--CCcceEEEEccCCCCeeEEEEEEee
Q 018029 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPSGQVCLHIKTIK 127 (362)
Q Consensus 85 ~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~~G~i~l~l~~~~ 127 (362)
.. ++++||++.++|.++ +.....|++|.+ .|++.+++.+..
T Consensus 81 ~~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~~~g~i~~~le~ 123 (126)
T 1rlw_A 81 YV-MDETLGTATFTVSSMKVGEKKEVPFIFNQ-VTEMVLEMSLEV 123 (126)
T ss_dssp SS-CCEEEEEEEEEGGGSCTTCEEEEEEEETT-TEEEEEEEEEEC
T ss_pred CC-CCceeEEEEEEHHHccCCCcEEEEEEcCC-CceEEEEEEEEe
Confidence 87 489999999999998 455678999986 455555555543
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.81 E-value=4.2e-19 Score=147.67 Aligned_cols=112 Identities=23% Similarity=0.375 Sum_probs=96.0
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC--eeEeeccccCCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCC-
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS--EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK- 88 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~--~~~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~~~- 88 (362)
....|.|+|++|++|+++|..|.+||||++.++. ..++|+++.+++||.|+|+|.|.+... ..|.|+|||+|..++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-DSITISVWNHKKIHKK 81 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-CCEEEEEEEGGGTTSS
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-CEEEEEEEECCCCCCC
Confidence 3578999999999999999999999999999964 778999999999999999999999764 359999999998876
Q ss_pred --CceeEEEEEEeccC---CCcceEEEEccCC--------CCeeEEEEE
Q 018029 89 --STVLGSVIVTVESE---GQTGAVWYTLDSP--------SGQVCLHIK 124 (362)
Q Consensus 89 --ddfIG~~~i~L~~l---~~~~~~w~~L~~~--------~G~i~l~l~ 124 (362)
+++||++.+++..+ ......|++|..+ .|+|++++.
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 79999999998876 4555789999753 467766664
No 11
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.78 E-value=1.8e-18 Score=144.66 Aligned_cols=103 Identities=15% Similarity=0.310 Sum_probs=90.8
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE-----CCeeEeeccccCCCCCeeccEEEEE-ecC---CCcEEEEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYD 82 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l-----~~~~~rT~~i~~t~nP~W~e~f~f~-v~~---~~~~L~~~V~D 82 (362)
..+.|.|+|++|++|+. +.+|.+||||++.+ ....++|+++++++||.|||+|.|. +.. ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 35889999999999997 77899999999998 3567899999999999999999999 752 35789999999
Q ss_pred cCCCCCCceeEEEEEEeccC--CCcceEEEEccCC
Q 018029 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~ 115 (362)
+|..+++++||++.++|.++ +.....|++|.+.
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 99999999999999999998 4567899999863
No 12
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=4.8e-18 Score=159.05 Aligned_cols=166 Identities=17% Similarity=0.285 Sum_probs=124.6
Q ss_pred CceeEEEEEEEeeecCCCCCCCCCCCcEEEEEEC---CeeEeeccccCCCCCeeccEEEEEecC---CCcEEEEEEEEcC
Q 018029 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~---~~~~rT~~i~~t~nP~W~e~f~f~v~~---~~~~L~~~V~D~d 84 (362)
...+.|.|+|++|++|+.+|..|.+||||++.+. ....+|+++.+++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 3568999999999999999999999999999984 457799999999999999999999863 2478999999999
Q ss_pred CCCCCceeEEEEEEeccC--CCcceEEEEccCC-------CCeeEEEEEEeeccccccccccccccchhhhccccccCCC
Q 018029 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP-------SGQVCLHIKTIKLPVNASRVMNGYAGANARRRASLDKQGP 155 (362)
Q Consensus 85 ~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~-------~G~i~l~l~~~~~~~~~~~~~~~~~~~~~r~r~~~~kl~~ 155 (362)
..+++++||++.++|.++ +...+.|++|.+. .|++++.+.+.+.... . .-..+++.++.+
T Consensus 96 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~~--------l---~v~v~~a~~L~~ 164 (284)
T 2r83_A 96 RFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGK--------L---TVVILEAKNLKK 164 (284)
T ss_dssp SSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTTE--------E---EEEEEEEESCCC
T ss_pred CCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCCc--------e---EEEEEEeECCCC
Confidence 999999999999999998 4556899999642 3777776665432110 0 001112345555
Q ss_pred ceeeccccccceeeccCC--------Ccceeeeehhhhhh
Q 018029 156 TVVHQKPGPLQTIFNLLP--------DEFVELSYSCVIER 187 (362)
Q Consensus 156 k~~~~k~~~f~~~F~lp~--------~E~l~~~~~c~l~~ 187 (362)
.+...+++||-++.-.+. .++..++.++.|..
T Consensus 165 ~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne 204 (284)
T 2r83_A 165 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNE 204 (284)
T ss_dssp CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEE
T ss_pred cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEce
Confidence 555667888888774432 24455566777765
No 13
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=8.8e-19 Score=150.42 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=91.4
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC------eeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~------~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D 82 (362)
..+.|.|+|++|++|+++|.+|.+||||++++.. .+++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 4578999999999999999999999999999953 268999999999999999999998632 4679999999
Q ss_pred cCCCCCCceeEEEEEEeccC---CCcceEEEEccC
Q 018029 83 WDIIWKSTVLGSVIVTVESE---GQTGAVWYTLDS 114 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l---~~~~~~w~~L~~ 114 (362)
+|..+++++||++.++|.++ .....+||.|.+
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVCRSGERSTRWYNLLS 155 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEBC
T ss_pred CCCCCCCcEEEEEEEEHHHccCCCCccccceEccC
Confidence 99999999999999999997 356789999863
No 14
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=1.3e-18 Score=146.69 Aligned_cols=103 Identities=23% Similarity=0.427 Sum_probs=92.7
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE---CCeeEeeccccCCCCCeeccEEEEEecC---CCcEEEEEEEEcCC
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDI 85 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l---~~~~~rT~~i~~t~nP~W~e~f~f~v~~---~~~~L~~~V~D~d~ 85 (362)
..+.|.|+|++|++|+.++..+.+||||++.+ +...++|+++++++||.|+|+|.|.+.. ....|.|+|||+|.
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 46789999999999999999999999999999 4567899999999999999999999863 24789999999999
Q ss_pred CCCCceeEEEEEEeccC--CCcceEEEEccC
Q 018029 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (362)
Q Consensus 86 ~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~ 114 (362)
.+++++||++.++|.++ +...+.|++|.+
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 99999999999999998 456789999975
No 15
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=3e-18 Score=149.78 Aligned_cols=116 Identities=12% Similarity=0.221 Sum_probs=96.1
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeeccccCCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCCCce
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKSTV 91 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~~~ddf 91 (362)
..+.|.|+|++|++|+..+..+.+||||++.++...++|+++++++||.|||+|.|.+.+ ...|.|+|||+|..+++++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCce
Confidence 368899999999999944445569999999999988999999999999999999999864 7889999999999999999
Q ss_pred eEEEEEEeccCC---C----cceEEEEccCC------CCeeEEEEEEeec
Q 018029 92 LGSVIVTVESEG---Q----TGAVWYTLDSP------SGQVCLHIKTIKL 128 (362)
Q Consensus 92 IG~~~i~L~~l~---~----~~~~w~~L~~~------~G~i~l~l~~~~~ 128 (362)
||++.++|.++. . ....|+.|..+ .|++++.+.+...
T Consensus 113 lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 113 LGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred EEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 999999999861 1 12679999753 3666666665544
No 16
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=2.7e-18 Score=146.46 Aligned_cols=103 Identities=23% Similarity=0.427 Sum_probs=92.5
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE---CCeeEeeccccCCCCCeeccEEEEEecC---CCcEEEEEEEEcCC
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDWDI 85 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l---~~~~~rT~~i~~t~nP~W~e~f~f~v~~---~~~~L~~~V~D~d~ 85 (362)
..+.|.|+|++|++|+.+|..|.+||||++.+ +...++|+++++++||.|||+|.|.+.. ....|.|+|||+|.
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 45789999999999999999999999999999 4567899999999999999999998863 25789999999999
Q ss_pred CCCCceeEEEEEEeccC--CCcceEEEEccC
Q 018029 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (362)
Q Consensus 86 ~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~ 114 (362)
.+++++||++.++|.++ +...++|++|.+
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 98999999999999998 456789999975
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=2.2e-18 Score=142.45 Aligned_cols=103 Identities=22% Similarity=0.406 Sum_probs=86.1
Q ss_pred CceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE-----CCeeEeeccccCCCCCeeccEEEEEe-cC---CCcEEEEEEE
Q 018029 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV-DE---LPVQIIVTIY 81 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l-----~~~~~rT~~i~~t~nP~W~e~f~f~v-~~---~~~~L~~~V~ 81 (362)
...+.|.|+|++|++|+.++..|.+||||++.+ +...++|+++++++||.|||+|.|.+ .. ....|.|+||
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 345889999999999999999999999999998 35678999999999999999999995 31 2468999999
Q ss_pred EcCCCCC--CceeEEEEEEeccC-CCcceEEEEcc
Q 018029 82 DWDIIWK--STVLGSVIVTVESE-GQTGAVWYTLD 113 (362)
Q Consensus 82 D~d~~~~--ddfIG~~~i~L~~l-~~~~~~w~~L~ 113 (362)
|+|..++ +++||++.++|.++ ....++||+|+
T Consensus 95 d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~Lq 129 (129)
T 2bwq_A 95 DQARVREEESEFLGEILIELETALLDDEPHWYKLQ 129 (129)
T ss_dssp EC-------CEEEEEEEEEGGGCCCSSCEEEEECC
T ss_pred ECCcCcCcCCceeEEEEEEccccCCCcCCccEECc
Confidence 9999887 99999999999997 44478999984
No 18
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.77 E-value=1.1e-18 Score=148.05 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=92.1
Q ss_pred ceeEEEEEEEeeecCCCCC-CCCCCCcEEEEEEC-----CeeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d-~~g~sDPyv~i~l~-----~~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D 82 (362)
..+.|.|+|++|++|+.++ ..|.+||||++.+. ..+++|+++++++||.|||+|.|.+... ...|.|+|||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 4588999999999999988 68999999999985 3477999999999999999999998743 4569999999
Q ss_pred cCCCCCCceeEEEEEEeccC--CCcceEEEEccCCC
Q 018029 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS 116 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~~ 116 (362)
+|..+++++||++.++|.++ +.....|++|.++.
T Consensus 101 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 101 HGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp ECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred CCCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 99999999999999999997 45678999998754
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.9e-18 Score=143.43 Aligned_cols=104 Identities=20% Similarity=0.363 Sum_probs=91.9
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEEC---CeeEeeccccCCCCCeeccEEEEEecC----CCcEEEEEEEEcC
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE----LPVQIIVTIYDWD 84 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~---~~~~rT~~i~~t~nP~W~e~f~f~v~~----~~~~L~~~V~D~d 84 (362)
..+.|.|+|++|++|+.++..|.+||||++.+. ...++|+++++++||.|||+|.|.+.. ....|.|+|||+|
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 468899999999999999999999999999993 467899999999999999999998532 2578999999999
Q ss_pred CCCCCceeEEEEEEeccC--CCcceEEEEccCC
Q 018029 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (362)
Q Consensus 85 ~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~ 115 (362)
..+++++||++.++|.++ +...+.|++|.+.
T Consensus 104 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 104 RFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp SSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred CCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 999999999999999998 4457899999863
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.77 E-value=2.4e-18 Score=143.56 Aligned_cols=102 Identities=27% Similarity=0.494 Sum_probs=92.2
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEE-----CCeeEeeccccCCCCCeeccEEEEEecC--CCcEEEEEEEEcCC
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDI 85 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l-----~~~~~rT~~i~~t~nP~W~e~f~f~v~~--~~~~L~~~V~D~d~ 85 (362)
.+.|.|+|++|++|+.++..|.+||||++.+ +....+|+++.+++||.|+|+|.|.+.. ....|.|+|||+|.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 5899999999999999999999999999999 5667899999999999999999999864 34579999999999
Q ss_pred CCCCceeEEEEEEeccC-CCcceEEEEccC
Q 018029 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (362)
Q Consensus 86 ~~~ddfIG~~~i~L~~l-~~~~~~w~~L~~ 114 (362)
.+++++||++.++|.++ .....+|++|.+
T Consensus 95 ~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 124 (137)
T 3rdl_A 95 TTRNDFMGSLSFGVSELMKMPASGWYKLLN 124 (137)
T ss_dssp SSCCEEEEEEEEEHHHHHHSCEEEEEECBC
T ss_pred CCCCceEEEEEEeHHHhccCccCceEECcC
Confidence 99999999999999998 444789999976
No 21
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=3.5e-18 Score=145.16 Aligned_cols=102 Identities=27% Similarity=0.471 Sum_probs=91.7
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEEC-----CeeEeeccccCCCCCeeccEEEEEecCC--CcEEEEEEEEcCC
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL--PVQIIVTIYDWDI 85 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~-----~~~~rT~~i~~t~nP~W~e~f~f~v~~~--~~~L~~~V~D~d~ 85 (362)
.+.|.|+|++|++|+.++..+.+||||++.+. ...++|+++++++||.|+|+|.|.+... ...|.|+|||+|.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 46799999999999999999999999999995 4678999999999999999999998743 4689999999999
Q ss_pred CCCCceeEEEEEEeccC-CCcceEEEEccC
Q 018029 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (362)
Q Consensus 86 ~~~ddfIG~~~i~L~~l-~~~~~~w~~L~~ 114 (362)
.+++++||++.++|.++ ....+.||+|.+
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcCccCCeEEccC
Confidence 99999999999999997 445789999976
No 22
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=1.1e-18 Score=146.72 Aligned_cols=105 Identities=25% Similarity=0.440 Sum_probs=91.8
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCe--------------eEeeccccCCCCCeeccEEEEE-ecC---CCc
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE--------------KRFSSMVPGSRYPMWGEEFNFS-VDE---LPV 74 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~--------------~~rT~~i~~t~nP~W~e~f~f~-v~~---~~~ 74 (362)
.+.|.|+|++|++|+.+|..|.+||||++.+... .++|+++++++||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 4689999999999999999999999999999642 4689999999999999999997 542 357
Q ss_pred EEEEEEEEcCCCCCCceeEEEEEEeccC--CCcceEEEEccCCCC
Q 018029 75 QIIVTIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPSG 117 (362)
Q Consensus 75 ~L~~~V~D~d~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~~G 117 (362)
.|.|+|||+|..+++++||++.++|.++ ......||+|.+.++
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE 141 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence 8999999999999999999999999987 356789999987543
No 23
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=4e-18 Score=142.91 Aligned_cols=103 Identities=22% Similarity=0.408 Sum_probs=90.8
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE-----CCeeEeeccccCCCCCeeccEEEEEe-cC---CCcEEEEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSV-DE---LPVQIIVTIYD 82 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l-----~~~~~rT~~i~~t~nP~W~e~f~f~v-~~---~~~~L~~~V~D 82 (362)
..+.|.|+|++|++|+.++..|.+||||++.+ +...++|+++++++||.|||+|.|.+ .. ....|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 45789999999999999999999999999998 35677999999999999999999994 32 24789999999
Q ss_pred cCCCCC--CceeEEEEEEeccC-CCcceEEEEccC
Q 018029 83 WDIIWK--STVLGSVIVTVESE-GQTGAVWYTLDS 114 (362)
Q Consensus 83 ~d~~~~--ddfIG~~~i~L~~l-~~~~~~w~~L~~ 114 (362)
+|..++ +++||++.++|.++ .....+||+|.+
T Consensus 99 ~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~ 133 (141)
T 1v27_A 99 QARVREEESEFLGEILIELETALLDDEPHWYKLQT 133 (141)
T ss_dssp BCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBC
T ss_pred CCCCcCCCCceEEEEEEEccccCCCCCCceEECcc
Confidence 999887 99999999999997 445789999986
No 24
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.75 E-value=5e-18 Score=147.85 Aligned_cols=103 Identities=17% Similarity=0.282 Sum_probs=91.1
Q ss_pred eeEEEEEEEeeecCCCCCC-CCCCCcEEEEEECC-----eeEeeccccCCCCCeeccEEEEEecCCCcEEEEEEE-EcCC
Q 018029 13 AYLIKLELLAAKNLIGANL-NGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDELPVQIIVTIY-DWDI 85 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~-~g~sDPyv~i~l~~-----~~~rT~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~-D~d~ 85 (362)
.+.|.|+|++|++|+.+|. .|.+||||++.+.. ..++|+++++++||.|||+|.|.+......|.|+|| |+|.
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~ 108 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR 108 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC
Confidence 5789999999999999995 79999999999842 367999999999999999999998766788999999 9999
Q ss_pred CCCCceeEEEEEEeccC--CCcceEEEEccCC
Q 018029 86 IWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (362)
Q Consensus 86 ~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~ 115 (362)
.+++++||++.++|.++ +.....|++|.+.
T Consensus 109 ~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 109 MDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 99999999999999998 5667899999874
No 25
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.75 E-value=9.4e-18 Score=143.26 Aligned_cols=103 Identities=26% Similarity=0.426 Sum_probs=90.7
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE-----CCeeEeeccccCCCCCeeccEEEEEec--CCCcEEEEEEEEcC
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVD--ELPVQIIVTIYDWD 84 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l-----~~~~~rT~~i~~t~nP~W~e~f~f~v~--~~~~~L~~~V~D~d 84 (362)
..+.|.|+|++|++|+.++ .|.+||||++.+ .....+|+++++++||.|||+|.|.+. +....|.|+|||+|
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 103 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRA 103 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCC
Confidence 4688999999999999999 699999999998 345689999999999999999999984 44567999999999
Q ss_pred CCCC-CceeEEEEEEeccCC---CcceEEEEccCC
Q 018029 85 IIWK-STVLGSVIVTVESEG---QTGAVWYTLDSP 115 (362)
Q Consensus 85 ~~~~-ddfIG~~~i~L~~l~---~~~~~w~~L~~~ 115 (362)
..++ +++||++.++|.++. .....|++|.++
T Consensus 104 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 104 SQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp SSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred CCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 9876 899999999999973 567899999863
No 26
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.4e-17 Score=139.83 Aligned_cols=101 Identities=16% Similarity=0.220 Sum_probs=88.2
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEEC---C-eeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEcC
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG---S-EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~---~-~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~d 84 (362)
..+.|.|+|++|+ ++|.+|.+||||++.+. . ..++|+++++++||.|||+|.|.+... ...|.|+|||+|
T Consensus 24 ~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 4578999999999 46789999999999983 2 356999999999999999999998742 467999999999
Q ss_pred CCCCCceeEEEEEEeccC--CCcceEEEEccCC
Q 018029 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (362)
Q Consensus 85 ~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~ 115 (362)
..+++++||++.++|.++ ......|++|.+.
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 999999999999999998 5677899999863
No 27
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.3e-17 Score=139.58 Aligned_cols=104 Identities=18% Similarity=0.235 Sum_probs=89.5
Q ss_pred ceeEEEEEEEeeecCCCCCCC-CCCCcEEEEEEC---CeeEeeccccCCCCCeeccEEEEE-ecC---CCcEEEEEEEEc
Q 018029 12 SAYLIKLELLAAKNLIGANLN-GTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFS-VDE---LPVQIIVTIYDW 83 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~-g~sDPyv~i~l~---~~~~rT~~i~~t~nP~W~e~f~f~-v~~---~~~~L~~~V~D~ 83 (362)
..+.|.|+|++|++|+.+|.. |.+||||++.+. ...++|+++++++||.|||+|.|. +.. ....|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 457899999999999999985 899999999984 468899999999999999999996 653 246899999999
Q ss_pred CCCCCCceeEEEEEEeccCC---CcceEEEEccCC
Q 018029 84 DIIWKSTVLGSVIVTVESEG---QTGAVWYTLDSP 115 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l~---~~~~~w~~L~~~ 115 (362)
|..+++++||++.++|.++. +....|++|.++
T Consensus 100 d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 100 DRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp CSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 99999999999999999983 334567888763
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=1e-17 Score=140.93 Aligned_cols=103 Identities=18% Similarity=0.317 Sum_probs=90.0
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC-----eeEeeccccCCCCCeeccEEEEE-ecCC---CcEEEEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFS-VDEL---PVQIIVTIYD 82 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~-----~~~rT~~i~~t~nP~W~e~f~f~-v~~~---~~~L~~~V~D 82 (362)
..+.|.|+|++|++|+.++..|.+||||++.+.. ..++|+++++++||.|+|+|.|. +... ...|.|+|||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 4678999999999999999999999999999953 67899999999999999999998 5421 3689999999
Q ss_pred cCCCCCCceeEEEEEEeccC--CCcceEEEEccC
Q 018029 83 WDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDS 114 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~ 114 (362)
+|..+++++||++.++|.++ +.....|+.|..
T Consensus 107 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 107 EDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp ECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999999999999999998 455567777764
No 29
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.74 E-value=2.1e-18 Score=143.96 Aligned_cols=108 Identities=26% Similarity=0.391 Sum_probs=92.9
Q ss_pred CceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC-----eeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEE
Q 018029 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYD 82 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~-----~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D 82 (362)
...+.|.|+|++|++|+.++..|.+||||++.+.. ...+|+++.+++||.|||+|.|.+... ...|.|+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 45689999999999999999999999999999852 467999999999999999999998643 2579999999
Q ss_pred cCCCCCCceeEEEEEEeccCCCcceEEEEccCCCCe
Q 018029 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l~~~~~~w~~L~~~~G~ 118 (362)
+|..+++++||++.+++.++....++|+.|....|+
T Consensus 93 ~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~ 128 (138)
T 3n5a_A 93 KDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQ 128 (138)
T ss_dssp CCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTC
T ss_pred CCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCC
Confidence 999999999999999999876666777777654444
No 30
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.74 E-value=3.2e-18 Score=148.12 Aligned_cols=107 Identities=17% Similarity=0.325 Sum_probs=93.1
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC-----eeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~-----~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~ 83 (362)
..+.|.|+|++|++|+.+|.+|.+||||++.+.. ..++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 4578999999999999999999999999999964 577999999999999999999998642 45899999999
Q ss_pred CCCCCCceeEEEEEEeccCCCcceEEEEccCCCCe
Q 018029 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l~~~~~~w~~L~~~~G~ 118 (362)
|..+++++||++.+++.+++....+|+.|....++
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~ 149 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDK 149 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTC
T ss_pred CCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCC
Confidence 99999999999999999876666778877654444
No 31
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=7.4e-18 Score=141.77 Aligned_cols=105 Identities=27% Similarity=0.400 Sum_probs=89.9
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEEC-----CeeEeeccccCCCCCeeccEEEEEecC---CCcEEEEEEEEc
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIVTIYDW 83 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~-----~~~~rT~~i~~t~nP~W~e~f~f~v~~---~~~~L~~~V~D~ 83 (362)
..+.|.|+|++|++|+.++..| +||||++.+. ...++|+++++++||.|||+|.|.+.. ....|.|+|||+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNS 100 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEEC
Confidence 3578999999999999999999 9999999983 257799999999999999999999863 235899999999
Q ss_pred CCCCC--CceeEEEEEEeccC--CCcceEEEEccCCCC
Q 018029 84 DIIWK--STVLGSVIVTVESE--GQTGAVWYTLDSPSG 117 (362)
Q Consensus 84 d~~~~--ddfIG~~~i~L~~l--~~~~~~w~~L~~~~G 117 (362)
|..+. +++||++.++|.++ .....+|+.|.++++
T Consensus 101 d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 101 GGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSG 138 (142)
T ss_dssp CCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCS
T ss_pred CCccccCCcEEEEEEEecccccccccccceeeccCCCC
Confidence 98763 57999999999987 446788999987543
No 32
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.73 E-value=3e-17 Score=155.02 Aligned_cols=166 Identities=15% Similarity=0.208 Sum_probs=121.8
Q ss_pred CceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE---CCeeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEcC
Q 018029 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITC---GSEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWD 84 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l---~~~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~d 84 (362)
...+.|.|+|++|++|+.+|.+|.+||||++.+ +...++|+++++++||.|+|+|.|.+... ...|.|+|||+|
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 356899999999999999999999999999999 56788999999999999999999998632 357999999999
Q ss_pred CCCCCceeEEEEEE-eccC---CCcceEEEEccCC------CCeeEEEEEEeeccccccccccccccchhhhccccccCC
Q 018029 85 IIWKSTVLGSVIVT-VESE---GQTGAVWYTLDSP------SGQVCLHIKTIKLPVNASRVMNGYAGANARRRASLDKQG 154 (362)
Q Consensus 85 ~~~~ddfIG~~~i~-L~~l---~~~~~~w~~L~~~------~G~i~l~l~~~~~~~~~~~~~~~~~~~~~r~r~~~~kl~ 154 (362)
..+++++||++.++ +.++ ......|+.|... .|++.+.+.+.+.. . . .. -.-+++..+.
T Consensus 97 ~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~--~-~-----l~---v~v~~a~~L~ 165 (296)
T 1dqv_A 97 RFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTA--G-L-----LT---VTIIKASNLK 165 (296)
T ss_dssp SSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTT--T-E-----EE---EEEEEEESCC
T ss_pred CCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEecccc--c-e-----eE---EEEEEeecCC
Confidence 99999999999995 3333 4456789999642 37777766654321 0 0 00 0112234455
Q ss_pred CceeeccccccceeeccCCC--------cceeeeehhhhhh
Q 018029 155 PTVVHQKPGPLQTIFNLLPD--------EFVELSYSCVIER 187 (362)
Q Consensus 155 ~k~~~~k~~~f~~~F~lp~~--------E~l~~~~~c~l~~ 187 (362)
+.+...+++||-++.-.+.+ .+..++.++.|..
T Consensus 166 ~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne 206 (296)
T 1dqv_A 166 AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNE 206 (296)
T ss_dssp CCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEE
T ss_pred ccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECc
Confidence 55666778898887754322 3455556666665
No 33
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=3.8e-17 Score=140.23 Aligned_cols=92 Identities=34% Similarity=0.504 Sum_probs=81.9
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC-----eeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-----EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~-----~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~ 83 (362)
..+.|.|+|++|++|+.+|.+|.+||||++.+.. ...+|+++.+++||.|||+|.|.+... ...|.|+|||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 4679999999999999999999999999999842 466999999999999999999998642 45799999999
Q ss_pred CCCCCCceeEEEEEEeccCC
Q 018029 84 DIIWKSTVLGSVIVTVESEG 103 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l~ 103 (362)
|..+++++||++.+++..++
T Consensus 103 d~~~~~~~iG~~~i~l~~~~ 122 (159)
T 1tjx_A 103 DKIGKNDAIGKVFVGYNSTG 122 (159)
T ss_dssp CSSSCCEEEEEEEEETTCCH
T ss_pred CCCCCCceEEEEEECCCCCC
Confidence 99999999999999998653
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.72 E-value=7.5e-18 Score=143.61 Aligned_cols=106 Identities=18% Similarity=0.346 Sum_probs=85.4
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE--CCe---eEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE---KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l--~~~---~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~ 83 (362)
..+.|.|+|++|++|+.++..|.+||||++.+ +.. +++|+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 45789999999999999999999999999998 433 56999999999999999999998753 36799999999
Q ss_pred CCCCCCceeEEEEEEeccCCCcceEEEEccCCCC
Q 018029 84 DIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSG 117 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l~~~~~~w~~L~~~~G 117 (362)
|..+++++||++.+++........+|+.|....+
T Consensus 108 d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~ 141 (153)
T 1w15_A 108 ERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPR 141 (153)
T ss_dssp CTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTT
T ss_pred CCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCC
Confidence 9999999999999999986666677777764333
No 35
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=141.19 Aligned_cols=104 Identities=18% Similarity=0.321 Sum_probs=88.8
Q ss_pred ceeEEEEEEEeeecCCCC-CC------CCCCCcEEEEEEC---CeeEeeccccCCCCCeeccEEEEEecC---CCcEEEE
Q 018029 12 SAYLIKLELLAAKNLIGA-NL------NGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE---LPVQIIV 78 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~-d~------~g~sDPyv~i~l~---~~~~rT~~i~~t~nP~W~e~f~f~v~~---~~~~L~~ 78 (362)
..+.|.|+|++|++|+.+ +. .|.+||||++.+. ...++|+++++++||.|||+|.|.+.. ....|.|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 457899999999999984 43 3589999999985 457799999999999999999999863 2358999
Q ss_pred EEEEcCCCCCCceeEEEEEEeccC--CCcceEEEEccCC
Q 018029 79 TIYDWDIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (362)
Q Consensus 79 ~V~D~d~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~ 115 (362)
+|||+|..+++++||++.++|.++ ......|+.|.++
T Consensus 104 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 104 TVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp EEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 999999999999999999999998 3445789999864
No 36
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.68 E-value=4e-16 Score=158.38 Aligned_cols=111 Identities=21% Similarity=0.302 Sum_probs=97.8
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeeccccCCCCCeeccEEEEEec--CCCcEEEEEEEEcCCCCCCc
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVD--ELPVQIIVTIYDWDIIWKST 90 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~~t~nP~W~e~f~f~v~--~~~~~L~~~V~D~d~~~~dd 90 (362)
.+.|.|+|++|++|+. |.+|++||||+|.++++..+|+++++++||.|||+|.|.+. +..+.|+|+|||+|..++||
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD 471 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 471 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCE
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCC
Confidence 6899999999999998 99999999999999988899999999999999999999864 35778999999999999999
Q ss_pred eeEEEEEEeccCCCcceEEEEccCCCCeeEEEEEEeec
Q 018029 91 VLGSVIVTVESEGQTGAVWYTLDSPSGQVCLHIKTIKL 128 (362)
Q Consensus 91 fIG~~~i~L~~l~~~~~~w~~L~~~~G~i~l~l~~~~~ 128 (362)
+||++.++|.. +..+.|+.|. +|.+++.+++.-.
T Consensus 472 ~LG~~~~~L~~--g~~~~~~~l~--~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 472 LLGSCDRSPHS--GFHEVTCELN--HGRVKFSYHAKCL 505 (540)
T ss_dssp EEEEEEECCCS--EEEEEEEECS--SSEEEEEEEEEEC
T ss_pred EEEEEEEEeeC--CcEEEEEEcC--CeEEEEEEEEEEC
Confidence 99999999883 3456788875 6888888775544
No 37
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.67 E-value=3.6e-16 Score=157.99 Aligned_cols=115 Identities=21% Similarity=0.351 Sum_probs=102.0
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeeccccCCCCCeeccEEEEEecCC-CcEEEEEEEEcCCCCCCc
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRYPMWGEEFNFSVDEL-PVQIIVTIYDWDIIWKST 90 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~~t~nP~W~e~f~f~v~~~-~~~L~~~V~D~d~~~~dd 90 (362)
..+.|.|+|++|++|+++|.+|.+||||++.++....+|+++.+++||.|+|+|.|.+... ...|.|+|||+|..++++
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d 464 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDD 464 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCC
Confidence 4589999999999999999999999999999999999999999999999999999999754 467999999999999999
Q ss_pred eeEEEEEEeccCCC------cceEEEEccC-CCCeeEEEEEEe
Q 018029 91 VLGSVIVTVESEGQ------TGAVWYTLDS-PSGQVCLHIKTI 126 (362)
Q Consensus 91 fIG~~~i~L~~l~~------~~~~w~~L~~-~~G~i~l~l~~~ 126 (362)
+||++.+++.++.. ....|+.|.+ ..|++++.+.+.
T Consensus 465 ~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred ceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 99999999998721 2678999975 569988887754
No 38
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=1.2e-15 Score=127.08 Aligned_cols=86 Identities=16% Similarity=0.314 Sum_probs=73.9
Q ss_pred CceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeecccc-CCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCCC
Q 018029 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWKS 89 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~-~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~~~d 89 (362)
.+.+.|.|+|++|++|.. .|.+||||++. .+..+|+++. +++||.|||+|.|.+.+....|.|+|||+| .++|
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~d 75 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWD 75 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCE
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCC
Confidence 356899999999998852 68899999999 3344555554 799999999999999876778999999999 8899
Q ss_pred ceeEEEEEEeccC
Q 018029 90 TVLGSVIVTVESE 102 (362)
Q Consensus 90 dfIG~~~i~L~~l 102 (362)
++||++.++|.++
T Consensus 76 d~iG~~~i~l~~l 88 (131)
T 2cjt_A 76 TMVGTVWIPLRTI 88 (131)
T ss_dssp EEEEEEEEEGGGS
T ss_pred CeEEEEEEEHHHh
Confidence 9999999999997
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=1.2e-15 Score=132.46 Aligned_cols=87 Identities=16% Similarity=0.292 Sum_probs=75.1
Q ss_pred CCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeecccc-CCCCCeeccEEEEEecCCCcEEEEEEEEcCCCCC
Q 018029 10 TNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIWK 88 (362)
Q Consensus 10 ~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~-~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~~~ 88 (362)
++..+.|.|+|++|++|. ..|.+||||++. .+..+|+++. +++||.|||+|.|.+.+....|.|+|||+| .++
T Consensus 10 ~g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~ 83 (167)
T 2cjs_A 10 GGILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIW 83 (167)
T ss_dssp CSCCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSC
T ss_pred CCceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCC
Confidence 345789999999999884 378899999999 3345666665 699999999999999877778999999999 889
Q ss_pred CceeEEEEEEeccC
Q 018029 89 STVLGSVIVTVESE 102 (362)
Q Consensus 89 ddfIG~~~i~L~~l 102 (362)
|++||++.++|.++
T Consensus 84 dd~iG~~~i~L~~l 97 (167)
T 2cjs_A 84 DTMVGTVWIPLRTI 97 (167)
T ss_dssp CEEEEEEEEEGGGS
T ss_pred CceEEEEEEEHHHh
Confidence 99999999999997
No 40
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=1.4e-14 Score=135.44 Aligned_cols=91 Identities=33% Similarity=0.486 Sum_probs=80.8
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEEC--C---eeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG--S---EKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~--~---~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~ 83 (362)
..+.|.|.|++|++|+.+|.+|.+||||++.+. . .+++|+++++++||.|||.|.|.+... ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 356899999999999999999999999999983 2 456999999999999999999998743 34699999999
Q ss_pred CCCCCCceeEEEEEEeccC
Q 018029 84 DIIWKSTVLGSVIVTVESE 102 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l 102 (362)
|..+++++||++.+++..+
T Consensus 228 d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp CSSSCCCEEEEEEEETTCC
T ss_pred CCCCCCcEEEEEEECCCCC
Confidence 9999999999999999874
No 41
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.54 E-value=8.8e-14 Score=143.86 Aligned_cols=106 Identities=21% Similarity=0.302 Sum_probs=92.8
Q ss_pred ceeEEEEEEEeeecCCCCCC--CCCCCcEEEEEEC-----CeeEeeccccCC-CCCeeccEEEEEecCC-CcEEEEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGANL--NGTSDPYAIITCG-----SEKRFSSMVPGS-RYPMWGEEFNFSVDEL-PVQIIVTIYD 82 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~--~g~sDPyv~i~l~-----~~~~rT~~i~~t-~nP~W~e~f~f~v~~~-~~~L~~~V~D 82 (362)
..+.|.|+|++|++|+.++. .|.+||||++.+. ..+.+|++++++ +||.|||+|.|.+..+ ...|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999999884 7899999999983 367899999987 9999999999998753 4679999999
Q ss_pred cCCCCCCceeEEEEEEeccCCCcceEEEEccCCCCe
Q 018029 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l~~~~~~w~~L~~~~G~ 118 (362)
+|..+++++||++.++|..+..+ .+|++|....|+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G-~r~v~L~d~~g~ 609 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG-YRHVHLLSKNGD 609 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE-EEEEEEECTTSC
T ss_pred cCCCCCCceeEEEEEEHHHcCCC-cEEEeCCCCCcC
Confidence 99999999999999999999664 469999876665
No 42
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.53 E-value=1.8e-14 Score=150.73 Aligned_cols=104 Identities=20% Similarity=0.361 Sum_probs=93.5
Q ss_pred CceeEEEEEEEeeecCCC---CCCCCCCCcEEEEEEC---CeeEeeccccCCCCCeeccEEEEEecC-CCcEEEEEEEEc
Q 018029 11 NSAYLIKLELLAAKNLIG---ANLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDE-LPVQIIVTIYDW 83 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~---~d~~g~sDPyv~i~l~---~~~~rT~~i~~t~nP~W~e~f~f~v~~-~~~~L~~~V~D~ 83 (362)
...+.|.|+|++|++|+. +|..|++||||++.+. ..+++|+++++++||.|||+|.|.+.. ....|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 457899999999999999 8889999999999997 467899999999999999999999985 466899999999
Q ss_pred CCCCCCceeEEEEEEeccC--CCcceEEEEccCC
Q 018029 84 DIIWKSTVLGSVIVTVESE--GQTGAVWYTLDSP 115 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~ 115 (362)
|..+ +++||++.++|.++ +...+.|++|.+.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 9998 99999999999998 4456899999863
No 43
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.52 E-value=1.3e-13 Score=114.93 Aligned_cols=115 Identities=14% Similarity=0.238 Sum_probs=93.6
Q ss_pred CCCceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCeeEeecccc-CCCCCeeccEEEEEecC---CCcEEEEEEEEcC
Q 018029 9 QTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVP-GSRYPMWGEEFNFSVDE---LPVQIIVTIYDWD 84 (362)
Q Consensus 9 ~~~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~~rT~~i~-~t~nP~W~e~f~f~v~~---~~~~L~~~V~D~d 84 (362)
-.++.--|+|.|.+|.+|+ |++|||+.+.+...+++|+++. ++.||.|||.|.|++.. ....|.+.|||++
T Consensus 16 ~~~~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 16 PRGSHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp ---CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred cCCCcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 3456678999999999997 5899999999999999999998 69999999999999873 3667999999999
Q ss_pred CCCCCceeEEEEEEeccC--CCcceEEEEccCCC-----CeeEEEEEEeec
Q 018029 85 IIWKSTVLGSVIVTVESE--GQTGAVWYTLDSPS-----GQVCLHIKTIKL 128 (362)
Q Consensus 85 ~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~~~~-----G~i~l~l~~~~~ 128 (362)
.++++++||++.++|.++ .+....+.+|...+ +.+++.|.|.+.
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred cccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCC
Confidence 999999999999999997 34444556665433 456666666653
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.50 E-value=3e-15 Score=141.27 Aligned_cols=103 Identities=26% Similarity=0.390 Sum_probs=88.7
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEEC-----CeeEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITCG-----SEKRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDW 83 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~-----~~~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~ 83 (362)
..+.|.|+|++|++|+.+|..|.+||||++.+. ..+++|+++++++||.|||.|.|.+... ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 357899999999999999999999999999985 2567999999999999999999998743 34799999999
Q ss_pred CCCCCCceeEEEEEEeccCCC-cceEEEEccC
Q 018029 84 DIIWKSTVLGSVIVTVESEGQ-TGAVWYTLDS 114 (362)
Q Consensus 84 d~~~~ddfIG~~~i~L~~l~~-~~~~w~~L~~ 114 (362)
|..+++++||++.+++..++. ..++|+.+..
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~ 261 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADPHGREHWAEMLA 261 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCHHHHHHHHTSSS
T ss_pred CCCCCCceEEEEEECCccCCchhHHHHHHHHh
Confidence 999999999999999998754 5566666554
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.40 E-value=1.7e-14 Score=145.17 Aligned_cols=98 Identities=21% Similarity=0.301 Sum_probs=15.2
Q ss_pred CceeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCe-eEeeccccCC---CCCeeccEEEEEecCCCcEEEEEEEE-cC-
Q 018029 11 NSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGSE-KRFSSMVPGS---RYPMWGEEFNFSVDELPVQIIVTIYD-WD- 84 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~-~~rT~~i~~t---~nP~W~e~f~f~v~~~~~~L~~~V~D-~d- 84 (362)
...+.|.|+|++|++|+++| ||||.+.++.. ..||++++++ +||.|||+|.|.+.+....|.++||| +|
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDK 82 (483)
T ss_dssp EEEECC--------------------------------------------------CCEECC------------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCc
Confidence 45688999999999999877 99999999765 5599999999 99999999999875446789999999 45
Q ss_pred --CCCCCceeEEEEEEeccC--CCcceEEEEcc
Q 018029 85 --IIWKSTVLGSVIVTVESE--GQTGAVWYTLD 113 (362)
Q Consensus 85 --~~~~ddfIG~~~i~L~~l--~~~~~~w~~L~ 113 (362)
..+++++||.+.+++.++ +...+.|++|.
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp ------------------------CCEECC---
T ss_pred cccCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 357899999999999998 45678999994
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.38 E-value=8e-13 Score=138.22 Aligned_cols=102 Identities=27% Similarity=0.494 Sum_probs=91.3
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEE-----CCeeEeeccccCCCCCeeccEEEEEecC--CCcEEEEEEEEcCC
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC-----GSEKRFSSMVPGSRYPMWGEEFNFSVDE--LPVQIIVTIYDWDI 85 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l-----~~~~~rT~~i~~t~nP~W~e~f~f~v~~--~~~~L~~~V~D~d~ 85 (362)
.+.|.|+|++|++|+++|.+|.+||||++.+ ...+++|+++++++||.|||.|.|.+.. ....|.++|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4678999999999999999999999999998 4567899999999999999999999873 35679999999999
Q ss_pred CCCCceeEEEEEEeccC-CCcceEEEEccC
Q 018029 86 IWKSTVLGSVIVTVESE-GQTGAVWYTLDS 114 (362)
Q Consensus 86 ~~~ddfIG~~~i~L~~l-~~~~~~w~~L~~ 114 (362)
.+++++||++.+++.++ ....+.|+.|.+
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls 280 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAGVDGWFKLLS 280 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCCEEEEEECBC
T ss_pred ccccccccccccchhhhccCCcccceeecc
Confidence 99999999999999987 455689999975
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.13 E-value=4.4e-10 Score=119.48 Aligned_cols=107 Identities=16% Similarity=0.261 Sum_probs=84.5
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC------eeEeeccccC-CCCCeecc-EEEEE-ec-CCCcEEEEEEEE
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS------EKRFSSMVPG-SRYPMWGE-EFNFS-VD-ELPVQIIVTIYD 82 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~------~~~rT~~i~~-t~nP~W~e-~f~f~-v~-~~~~~L~~~V~D 82 (362)
...|.|+|++|++|+.. .+||||+|.+.. .+++|+++.+ ++||.||| +|.|. +. +....|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 46899999999999853 689999999842 3569999985 59999999 69998 64 334579999999
Q ss_pred cCCCCCCceeEEEEEEeccCCCcceEEEEccCCCCe------eEEEEEEeec
Q 018029 83 WDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ------VCLHIKTIKL 128 (362)
Q Consensus 83 ~d~~~~ddfIG~~~i~L~~l~~~~~~w~~L~~~~G~------i~l~l~~~~~ 128 (362)
+| ++|||++.++|..+..+ -++++|..+.|+ +.+++.+...
T Consensus 800 ~d----ddfiG~~~lpL~~L~~G-yR~vpL~~~~g~~l~~atLfv~i~~~~~ 846 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSG-YHYVCLRNEANQPLCLPALLIYTEASDY 846 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCE-EEEEEEECTTSCEEEEEEEEEEEEEEEC
T ss_pred CC----ccEEeeEEEEHHHcCCC-ceEEEecCCCCCccCceEEEEEEEEEec
Confidence 87 78999999999999765 457888765544 5566665543
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.13 E-value=4.6e-10 Score=118.61 Aligned_cols=106 Identities=16% Similarity=0.209 Sum_probs=84.6
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEECC-------eeEeeccccC-CCCCeeccE-EEEE-ecC-CCcEEEEEEE
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGS-------EKRFSSMVPG-SRYPMWGEE-FNFS-VDE-LPVQIIVTIY 81 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~-------~~~rT~~i~~-t~nP~W~e~-f~f~-v~~-~~~~L~~~V~ 81 (362)
.+.|.|+|++|++|+.+ .+||||.+.+.. .+++|+++.+ ++||.|||+ |.|. +.. .-..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999753 689999999842 5679999985 599999998 9998 653 2467999999
Q ss_pred EcCCCCCCceeEEEEEEeccCCCcceEEEEccCCCCe------eEEEEEEee
Q 018029 82 DWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ------VCLHIKTIK 127 (362)
Q Consensus 82 D~d~~~~ddfIG~~~i~L~~l~~~~~~w~~L~~~~G~------i~l~l~~~~ 127 (362)
|++ ++|||++.++|..+..+ -++++|..+.|+ +.+++.+..
T Consensus 725 D~d----ddfiG~~~ipL~~L~~G-yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPG-YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCE-EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC----CCeeeEEEEEHHHcCCc-ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 985 68999999999999765 457888776654 445555543
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.08 E-value=1.1e-09 Score=116.15 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=80.2
Q ss_pred ceeEEEEEEEeeecCCCCCCCCCCCcEEEEEE-C-----CeeEeec-ccc-CCCCCeecc-EEEE-EecC-CCcEEEEEE
Q 018029 12 SAYLIKLELLAAKNLIGANLNGTSDPYAIITC-G-----SEKRFSS-MVP-GSRYPMWGE-EFNF-SVDE-LPVQIIVTI 80 (362)
Q Consensus 12 ~~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l-~-----~~~~rT~-~i~-~t~nP~W~e-~f~f-~v~~-~~~~L~~~V 80 (362)
..+.|.|+|++|++|+. +.+||||.+.+ + .++++|+ ++. +++||.||| +|.| .+.. ....|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46799999999999985 46999999998 3 1357899 786 469999999 6999 7753 345799999
Q ss_pred EEcCCCCCCceeEEEEEEeccCCCcceEEEEccCCCCe
Q 018029 81 YDWDIIWKSTVLGSVIVTVESEGQTGAVWYTLDSPSGQ 118 (362)
Q Consensus 81 ~D~d~~~~ddfIG~~~i~L~~l~~~~~~w~~L~~~~G~ 118 (362)
||+| +++||++.++|..+..+ .+|++|....|.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G-~r~v~L~~~~g~ 784 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSG-YHHLCLHSESNM 784 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCE-EEEEEEECTTCC
T ss_pred EEeC----CCccceEeeehhhcCCC-cEEEeccCCCCC
Confidence 9986 78999999999999664 568899765665
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.03 E-value=7.2e-09 Score=84.01 Aligned_cols=108 Identities=13% Similarity=0.208 Sum_probs=83.2
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEECCee----Eee-ccccCCCCCeeccEEEEEecCCCcEEEEEEEEcCCCC
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITCGSEK----RFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWDIIW 87 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l~~~~----~rT-~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d~~~ 87 (362)
...|+|.+.++.--+-+......||||.+.++... .+| ...++|..|.|++.|.-.+.+ .+.|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC--
Confidence 46778888665532222233468999999996432 244 666789999999999999887 7899999996544
Q ss_pred CCceeEEEEEEeccC-------CCcceEEEEccCCCCeeEEEEEEe
Q 018029 88 KSTVLGSVIVTVESE-------GQTGAVWYTLDSPSGQVCLHIKTI 126 (362)
Q Consensus 88 ~ddfIG~~~i~L~~l-------~~~~~~w~~L~~~~G~i~l~l~~~ 126 (362)
+|++.+++++.++ ++..+.|+.|+| .|++++.+.+.
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-QAKVLMSVQYF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-SCEEEEEEEEE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEe
Confidence 8999999999986 234578999998 89999998875
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.97 E-value=7.3e-09 Score=85.06 Aligned_cols=112 Identities=11% Similarity=0.228 Sum_probs=85.6
Q ss_pred CceeEEEEEEEeeecCCCCC-CCCCCCcEEEEEECCe----eEee-ccccCCCCCeeccEEEEEecCCCcEEEEEEEEcC
Q 018029 11 NSAYLIKLELLAAKNLIGAN-LNGTSDPYAIITCGSE----KRFS-SMVPGSRYPMWGEEFNFSVDELPVQIIVTIYDWD 84 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~d-~~g~sDPyv~i~l~~~----~~rT-~~i~~t~nP~W~e~f~f~v~~~~~~L~~~V~D~d 84 (362)
+-...|+|.+.+..--+.+. .....||||.+.++.. ..+| ...++|..|.|++.|.-.+.+ .+.|.+.|++..
T Consensus 7 ~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a 85 (138)
T 2enj_A 7 GMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKN 85 (138)
T ss_dssp SCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSS
T ss_pred ccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCC
Confidence 34577888887766433222 1336899999999643 2466 566679999999999999887 789999999543
Q ss_pred CCCCCceeEEEEEEeccC-------CCcceEEEEccCCCCeeEEEEEEeec
Q 018029 85 IIWKSTVLGSVIVTVESE-------GQTGAVWYTLDSPSGQVCLHIKTIKL 128 (362)
Q Consensus 85 ~~~~ddfIG~~~i~L~~l-------~~~~~~w~~L~~~~G~i~l~l~~~~~ 128 (362)
. +|++.+++++.++ ++..+.|+.|++ .|++++.+++...
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-~Gkl~v~i~~~~e 131 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLELKP-QGRMLMNARYFLE 131 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-SCEEEEEEEECCC
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-CcEEEEEEEEEEe
Confidence 3 8999999999987 235688999998 8999999988643
No 52
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=96.54 E-value=0.034 Score=46.02 Aligned_cols=90 Identities=13% Similarity=0.220 Sum_probs=56.9
Q ss_pred ceeEEEecceEEEeecCCCceeEEEeecccceEEEEeccccccCcEEEEEecCCCCCCCCCCC---CCCCceeEEEeeee
Q 018029 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLG---SPDGRVRYKFASFW 268 (362)
Q Consensus 192 ~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~~~---~~~~~~~~~F~sf~ 268 (362)
.|++|+|.+.+||-..-- ....+.||+.+|..++.+... +..+..|+++......+.++.+ +....-+..|.+=
T Consensus 39 ~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~-f~~s~Ki~l~l~~~~~~~~~gp~~~s~~~~~kLsFr~G- 115 (140)
T 2hth_B 39 AGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAG-IGKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEH- 115 (140)
T ss_dssp CEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCT-TSSCCEEEEEECCCCCCSSSCCCSTTSCCEEEEEETTS-
T ss_pred CCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeeccc-cccCceEEEEecCCCccCCCCCcccccCcEEEEEEcCC-
Confidence 499999999999976543 457799999999999999975 4444444444332223333322 1223334444332
Q ss_pred chHHHHHHHHHHHHHH
Q 018029 269 NRNHALRQLQRTAKNY 284 (362)
Q Consensus 269 ~rd~~~~~l~~~~~~~ 284 (362)
-.++-+..|.+++++.
T Consensus 116 g~~eF~~~L~~al~~k 131 (140)
T 2hth_B 116 GQIEFYRRLSEEMTQR 131 (140)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHh
Confidence 2477778887777643
No 53
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=95.16 E-value=0.12 Score=42.82 Aligned_cols=84 Identities=17% Similarity=0.198 Sum_probs=58.6
Q ss_pred ceeEEEecceEEEeecCCCceeEEEeecccceEEEEeccccccCcEEEEEecCCCCCCCCCCCCCCCceeEEEeeeechH
Q 018029 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRN 271 (362)
Q Consensus 192 ~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~F~sf~~rd 271 (362)
.|++|+|...+||-..-......+.+|+.+|.+++.+... +..++.|+++...+ .+.....+..|.+=-. +
T Consensus 52 ~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~-fg~s~Ki~l~~~p~-------~~~~~~~KLsFk~GGa-~ 122 (145)
T 2cay_A 52 RGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF-LTRSPRLILFFKDP-------SSSTEFVQLSFRKSDG-V 122 (145)
T ss_dssp SEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSS-SSSSCEEEEEESSC-------SSTTCCEEEEESSSCC-H
T ss_pred ccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCc-cccCceEEEEecCC-------CCCceEEEEEEcCCCc-h
Confidence 4999999999999765433336799999999999998876 34566666653211 1223456677766554 7
Q ss_pred HHHHHHHHHHHHH
Q 018029 272 HALRQLQRTAKNY 284 (362)
Q Consensus 272 ~~~~~l~~~~~~~ 284 (362)
+-++.|.+++++.
T Consensus 123 eF~~~l~~al~~~ 135 (145)
T 2cay_A 123 LFSQATERALENI 135 (145)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777777644
No 54
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=92.44 E-value=0.74 Score=36.02 Aligned_cols=96 Identities=15% Similarity=0.224 Sum_probs=64.0
Q ss_pred CCcceeeeehhhhhhccccceeEEEecceEEEeecCCCceeEEEeecccceEEEEeccccccCcEEEEEecCCCCCCCCC
Q 018029 173 PDEFVELSYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPP 252 (362)
Q Consensus 173 ~~E~l~~~~~c~l~~~~~~~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~ 252 (362)
++|+|.....-.|++.- |.||++..++-|..+-- ..-.+.+++.||...+-+....===-+.|+.+.|
T Consensus 5 ~~~~ll~v~~v~yKK~d---GtL~l~~d~i~W~p~~~-~~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~~-------- 72 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQD---GALYLMAERIAWAPEGK-DRFTISHMYADIKCQKISPEGKAKIQLQLVLHAG-------- 72 (108)
T ss_dssp SCCEEEEESCCBCSSCB---CEEEEETTEEEEECSSS-SSCSEEEETTTCCCEEECCSSSSSCEEEEECSSS--------
T ss_pred chheeEEehhheeecCC---ceEEEEcceEEEccCCC-CCceEEEehhhhhcceeCCCCCccEEEEEEEeCC--------
Confidence 45777777777776643 99999999999888543 4566788999999865554321001467777543
Q ss_pred CCCCCCceeEEEeeee----chHHHHHHHHHHHHHHH
Q 018029 253 LGSPDGRVRYKFASFW----NRNHALRQLQRTAKNYH 285 (362)
Q Consensus 253 ~~~~~~~~~~~F~sf~----~rd~~~~~l~~~~~~~~ 285 (362)
+...|.|++=- .||..=++|.+++...+
T Consensus 73 -----~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~~k 104 (108)
T 1pfj_A 73 -----DTTNFHFSNESTAVKERDAVKDLLQQLLPKFK 104 (108)
T ss_dssp -----CEEEEECCCSSCTTHHHHHHHHHHHHHHHHHS
T ss_pred -----CceEEEEcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888743 36666666766666543
No 55
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=89.83 E-value=9.3 Score=33.64 Aligned_cols=56 Identities=11% Similarity=0.058 Sum_probs=40.7
Q ss_pred eEeeccccCCCCCeeccEEEEEecCC---CcEEEEEEEEcCCCC----CCceeEEEEEEeccC
Q 018029 47 KRFSSMVPGSRYPMWGEEFNFSVDEL---PVQIIVTIYDWDIIW----KSTVLGSVIVTVESE 102 (362)
Q Consensus 47 ~~rT~~i~~t~nP~W~e~f~f~v~~~---~~~L~~~V~D~d~~~----~ddfIG~~~i~L~~l 102 (362)
..+|.+...+.+|.|+|++.+.++.. ...|.|+++....-. .+..+|-+.++|-+-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~ 140 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRY 140 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCT
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccC
Confidence 34778888889999999999999842 456999999865321 224677777776544
No 56
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=89.78 E-value=2.7 Score=45.10 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=60.8
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEE--CCe----eEeeccccCCCCCeeccEEEEEec----CCCcEEEEEEEE
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSE----KRFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYD 82 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l--~~~----~~rT~~i~~t~nP~W~e~f~f~v~----~~~~~L~~~V~D 82 (362)
...+.|+|.++.++... ..++-||.+.+ |.+ ...|..+.-..+|.|||...|++. +....|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 56789999999998643 34677877765 322 335555555678999999999875 346789999999
Q ss_pred cCCC--C----------CCceeEEEEEEeccC
Q 018029 83 WDII--W----------KSTVLGSVIVTVESE 102 (362)
Q Consensus 83 ~d~~--~----------~ddfIG~~~i~L~~l 102 (362)
.... + .+..||.+.++|-+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 7432 1 245899999999774
No 57
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=86.67 E-value=2 Score=42.85 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=38.9
Q ss_pred cccceeEEEecceEEEeecCCCceeEEEeecccceEEEEeccccccCcEEEEEec
Q 018029 189 FLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRM 243 (362)
Q Consensus 189 ~~~~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~~~ 243 (362)
-...|.||+|..++.|.+.. ...+-||+.-|..|+|.....-...|.|.+++
T Consensus 23 ~~~~GtL~lTn~~LiF~~~~---~~e~wi~~~~I~~VeK~~~~~~~~~l~I~CKD 74 (512)
T 2yf0_A 23 KSLTGTLYLTATHLLFIDSH---QKETWILHHHIASVEKLALTTSGCPLVIQCKN 74 (512)
T ss_dssp -CCEEEEEECSSEEEEEESS---SCEEEEEGGGEEEEEECCCBTTBEEEEEEETT
T ss_pred CceeEEEEEECCEEEEeCCC---CCceEecccceeEEEEecCCCCCceEEEEecC
Confidence 45679999999999999932 33468999999999997643223367777754
No 58
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=84.95 E-value=6.7 Score=42.59 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=60.0
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEE--CC----eeEeeccccCCCCCeeccEEEEEec----CCCcEEEEEEEE
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GS----EKRFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYD 82 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l--~~----~~~rT~~i~~t~nP~W~e~f~f~v~----~~~~~L~~~V~D 82 (362)
...+.|+|+.+.++.. +.....+-||...+ |. ....|..+. ..+|.|||...|++. +...+|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNV-NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCC-CCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCC-CccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 3578899999988753 33334677888776 32 233444333 457889999999875 346789999999
Q ss_pred cCCC----CCCceeEEEEEEeccC
Q 018029 83 WDII----WKSTVLGSVIVTVESE 102 (362)
Q Consensus 83 ~d~~----~~ddfIG~~~i~L~~l 102 (362)
.... .....||.+.++|-+-
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 7642 1245899999999874
No 59
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=84.68 E-value=5 Score=41.08 Aligned_cols=72 Identities=18% Similarity=0.289 Sum_probs=48.1
Q ss_pred ccCCCcceeee-----ehhhhhhccccceeEEEecceEEEeecCCCceeEEEeecccceEEEEecc--ccc-cC-cEEEE
Q 018029 170 NLLPDEFVELS-----YSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH--AFI-NP-AITII 240 (362)
Q Consensus 170 ~lp~~E~l~~~-----~~c~l~~~~~~~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~--~~~-~~-~i~i~ 240 (362)
.+-++|.++.. |.|-.. -...|.||+|..++.|.+..-...-.+-||+.-|..|+|... ... .+ .|.|.
T Consensus 80 ~LLPGE~v~~~~~~V~~~~p~~--~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~ 157 (657)
T 1lw3_A 80 PLLPGENIKDMAKDVTYICPFT--GAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETV 157 (657)
T ss_dssp CCCTTCCEEEEEEEEEEEETTT--EEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEE
T ss_pred ccCCCeeEEEEeCCEEEecCCC--CceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEE
Confidence 44456666533 223222 246799999999999998654344568899999999999752 111 22 58888
Q ss_pred Eec
Q 018029 241 LRM 243 (362)
Q Consensus 241 ~~~ 243 (362)
+++
T Consensus 158 CKD 160 (657)
T 1lw3_A 158 CKD 160 (657)
T ss_dssp ETT
T ss_pred ecC
Confidence 764
No 60
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=83.21 E-value=9.6 Score=40.92 Aligned_cols=88 Identities=14% Similarity=0.099 Sum_probs=56.4
Q ss_pred eEEEEEEEeeecCCCCCCCCCCCcEEEEEE--CCee---EeeccccCCCCCeeccEEEEEec----CCCcEEEEEEEEcC
Q 018029 14 YLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEK---RFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYDWD 84 (362)
Q Consensus 14 ~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l--~~~~---~rT~~i~~t~nP~W~e~f~f~v~----~~~~~L~~~V~D~d 84 (362)
..+.|+|+.+...... .+..++-||...+ |.+. .+|..+.-+.+|.|||.+.|++. +...+|.++||+..
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 5678888887642211 1234567777655 4332 24555545667999999999875 34678999999864
Q ss_pred CCC----------------CCceeEEEEEEeccC
Q 018029 85 IIW----------------KSTVLGSVIVTVESE 102 (362)
Q Consensus 85 ~~~----------------~ddfIG~~~i~L~~l 102 (362)
..+ +...||.+.++|-+-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 245899999998774
No 61
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=82.17 E-value=6 Score=39.53 Aligned_cols=54 Identities=13% Similarity=0.226 Sum_probs=40.7
Q ss_pred ccceeEEEecceEEEeecCCCceeEEEeecccceEEEEecc--ccc-cC-cEEEEEec
Q 018029 190 LYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH--AFI-NP-AITIILRM 243 (362)
Q Consensus 190 ~~~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~--~~~-~~-~i~i~~~~ 243 (362)
...|.||+|..++.|.+..-...-.+-||+.-|..|+|... ... .+ .|.|.+++
T Consensus 31 ~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~CKD 88 (528)
T 1zsq_A 31 AVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKD 88 (528)
T ss_dssp EEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETT
T ss_pred ceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEccC
Confidence 46799999999999998654345568999999999999753 111 22 68888764
No 62
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=75.53 E-value=4 Score=44.38 Aligned_cols=87 Identities=16% Similarity=0.148 Sum_probs=57.0
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCCcEEEEEE--CCee----EeeccccCCCCCeeccEEEEEec----CCCcEEEEEEEE
Q 018029 13 AYLIKLELLAAKNLIGANLNGTSDPYAIITC--GSEK----RFSSMVPGSRYPMWGEEFNFSVD----ELPVQIIVTIYD 82 (362)
Q Consensus 13 ~~~L~V~Vi~A~~L~~~d~~g~sDPyv~i~l--~~~~----~rT~~i~~t~nP~W~e~f~f~v~----~~~~~L~~~V~D 82 (362)
...+.|+|..+.++... ..++-||.+.+ |.+. ..|..+.-+.+|.|||...|++. +....|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46788999999988643 34667776544 4322 24555554678999999999875 336789999999
Q ss_pred cCCC----------------------CCCceeEEEEEEeccC
Q 018029 83 WDII----------------------WKSTVLGSVIVTVESE 102 (362)
Q Consensus 83 ~d~~----------------------~~ddfIG~~~i~L~~l 102 (362)
.... ..+..+|.+.++|-+-
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp C------------------------------CCEEEEESBCT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 6311 0123888888888764
No 63
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=58.76 E-value=12 Score=36.06 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=44.8
Q ss_pred eehhhhhh-ccccceeEEEecceEEEeecCCC-----cee---------EEEeecccceEEEEeccccccCcEEEEEecC
Q 018029 180 SYSCVIER-SFLYHGRMYVSAWHICFHSNAFS-----RQM---------KVIIPIGDIDEIQRSQHAFINPAITIILRMG 244 (362)
Q Consensus 180 ~~~c~l~~-~~~~~G~lyis~~~~cF~S~~~g-----~~~---------k~~ip~~di~~i~k~~~~~~~~~i~i~~~~~ 244 (362)
+..|.+.. .....|++.|+...+.|....-. ... ...+++++|..|-+.....-..||+|.+..|
T Consensus 6 ~~~~~~i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rryll~~~alEif~~~g 85 (414)
T 1t77_A 6 STPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANR 85 (414)
T ss_dssp EEEEEEECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEEEEeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeeccCcceeEEEEEcCC
Confidence 34566666 45556999999999999863210 001 1368999999998876544334999999653
No 64
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=58.58 E-value=57 Score=26.96 Aligned_cols=90 Identities=10% Similarity=0.076 Sum_probs=60.4
Q ss_pred CceeEEEEEEEeeecCCCC-CCCCCCCcEEEEEEC---CeeEeeccccCCCCCeeccEEEEEecCC--------CcEEEE
Q 018029 11 NSAYLIKLELLAAKNLIGA-NLNGTSDPYAIITCG---SEKRFSSMVPGSRYPMWGEEFNFSVDEL--------PVQIIV 78 (362)
Q Consensus 11 ~~~~~L~V~Vi~A~~L~~~-d~~g~sDPyv~i~l~---~~~~rT~~i~~t~nP~W~e~f~f~v~~~--------~~~L~~ 78 (362)
+..+.+.|.|.++.--+.. ...+..+|..-+.++ -+.+.|.++. +.+|.+|-+-.+.+... ...+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 4568899999887621111 012235676555554 4555666655 88999998888877521 235889
Q ss_pred EEEEcCCCCCCceeEEEEEEeccC
Q 018029 79 TIYDWDIIWKSTVLGSVIVTVESE 102 (362)
Q Consensus 79 ~V~D~d~~~~ddfIG~~~i~L~~l 102 (362)
+++.... +.-+.||.+++++.++
T Consensus 94 ELhqa~g-~~~~tla~~~I~l~~l 116 (156)
T 2yrb_A 94 EVHQAYS-TEYETIAACQLKFHEI 116 (156)
T ss_dssp EEEEECS-SCEEEEEEEEECCSHH
T ss_pred EEEEeeC-CCceEEEEEEEEhHHh
Confidence 9988753 3557999999999987
No 65
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=50.44 E-value=62 Score=28.59 Aligned_cols=68 Identities=18% Similarity=0.317 Sum_probs=47.1
Q ss_pred ceeEEEecceEEEeecCCCceeEEEeecccceEEEEeccccccCcEEEEEecCCCCCCCCCCCCCCCceeEEEeeeechH
Q 018029 192 HGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRN 271 (362)
Q Consensus 192 ~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~F~sf~~rd 271 (362)
.|-||.-.+++-|-- ++--+.||++||.+|.=+....-.=++.|+++.| ..|.|++.-..+
T Consensus 166 eG~LyfL~~~ilFgf----~KP~l~i~~~dI~svs~Srv~~RTFdl~v~~k~g---------------~e~eFsmIDq~E 226 (237)
T 3fss_A 166 EGTLYFLPDHIIFGF----KKPILLLDASDIESITYSSITRLTFNASLVTKDG---------------EKYEFSMIDQTE 226 (237)
T ss_dssp EEEEEECSSEEEEES----SSSCEEEEGGGEEEEEEESCCSSEEEEEEEETTS---------------CEEEEEEEEGGG
T ss_pred CeEEEEecCceEEec----CCCeEEEEehhEEEEEEEeccCcEEEEEEEECCC---------------CeEEEeecCHHH
Confidence 499999988888742 2333899999999998888543333777877542 489999876544
Q ss_pred HHHHHHHHH
Q 018029 272 HALRQLQRT 280 (362)
Q Consensus 272 ~~~~~l~~~ 280 (362)
. ..|.+.
T Consensus 227 ~--~~Id~f 233 (237)
T 3fss_A 227 Y--AKIDDY 233 (237)
T ss_dssp H--HHHHHH
T ss_pred H--HHHHHH
Confidence 3 444443
No 66
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=43.59 E-value=31 Score=26.84 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=34.6
Q ss_pred eeEEEecceEEEeecCCCceeEEEeecccceEEEEecc
Q 018029 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH 230 (362)
Q Consensus 193 G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~ 230 (362)
+.|.+.+..+.|...+-|....+.||+..|..|.-..+
T Consensus 60 ~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyArEn 97 (111)
T 1ou8_A 60 GNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYAREN 97 (111)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTT
T ss_pred cCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeecc
Confidence 88999999999999999999999999999999876543
No 67
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=41.72 E-value=34 Score=26.92 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=34.1
Q ss_pred eeEEEecceEEEeecCCCceeEEEeecccceEEEEec
Q 018029 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ 229 (362)
Q Consensus 193 G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~ 229 (362)
+.|.+.+..+.|...+-|....+.||+..|..|.-..
T Consensus 61 ~~L~i~nd~IsF~ARFgGv~~~i~VP~~AV~aIyArE 97 (118)
T 1yfn_A 61 GNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARE 97 (118)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred cCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeee
Confidence 7899999999999999999999999999999987654
No 68
>1ou9_A Stringent starvation protein B homolog; SSRA peptide-binding protein, homodimer, transport protein; 1.80A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1oul_A 1zsz_C
Probab=40.45 E-value=36 Score=27.17 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=34.6
Q ss_pred eeEEEecceEEEeecCCCceeEEEeecccceEEEEecc
Q 018029 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQH 230 (362)
Q Consensus 193 G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~ 230 (362)
+.|.+.+..+.|...+-|....+.||+..|..|.-..+
T Consensus 60 ~~L~i~nd~IsF~ARFgGv~~~I~VP~~AV~aIyArEn 97 (129)
T 1ou9_A 60 GNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYAREN 97 (129)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETTT
T ss_pred cCeEEeccEEEEEEEECCEeEEEEEehHheeEeeeccc
Confidence 88999999999999999999999999999999876543
No 69
>2gcl_A Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region; chromaint, double PH domain, yfact, DNA replication, RPA; 2.21A {Saccharomyces cerevisiae} SCOP: b.55.1.10 PDB: 2gcj_A
Probab=37.92 E-value=87 Score=28.10 Aligned_cols=79 Identities=20% Similarity=0.362 Sum_probs=50.3
Q ss_pred eehhhhhhccccceeEEEecceEEEeecCCCceeEEEeecccceEEEEec-ccc--ccC--cEEEEEecCCCCCCCCCCC
Q 018029 180 SYSCVIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQ-HAF--INP--AITIILRMGAGGHGVPPLG 254 (362)
Q Consensus 180 ~~~c~l~~~~~~~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~-~~~--~~~--~i~i~~~~~~~~~~~~~~~ 254 (362)
...|++..+ .|-||.=.+.+-|-. +=.+.||++||.+|+=+. +.. ..- .+.|.++.|
T Consensus 166 ~Vkcs~ka~---eG~LypL~~gflF~~-----KP~~~i~~~~I~sV~fsrvg~~~~~~rTFdl~v~~k~g---------- 227 (261)
T 2gcl_A 166 AVSCSFKAN---EGYLYPLDNAFFFLT-----KPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRSN---------- 227 (261)
T ss_dssp CEEEEETTE---EEEEEECSSEEEEES-----SSCEEEEGGGEEEEEEEC--------CEEEEEEEESTT----------
T ss_pred eEEEeccCC---ceEEEEecCceEEee-----CCcEEEEhhHeeEEEEEeccCCcccCceEEEEEEEcCC----------
Confidence 444555543 399999988877742 234899999999999765 211 111 677887653
Q ss_pred CCCCceeEEEeeeechHHHHHHHHHHHH
Q 018029 255 SPDGRVRYKFASFWNRNHALRQLQRTAK 282 (362)
Q Consensus 255 ~~~~~~~~~F~sf~~rd~~~~~l~~~~~ 282 (362)
+..|.|++. +|++ |..|.+.++
T Consensus 228 ----~~~~~Fs~I-dreE-~~~L~~ylk 249 (261)
T 2gcl_A 228 ----RGSTTFANI-SKEE-QQLLEQFLK 249 (261)
T ss_dssp ----CCEEEEEEE-EGGG-HHHHHHHHH
T ss_pred ----CccEEEccc-CHHH-HHHHHHHHH
Confidence 259999875 4555 344444544
No 70
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=36.81 E-value=7.3 Score=39.23 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=0.0
Q ss_pred eeEEEecceEEEeecCCCceeEEEeecccceEEEEeccc
Q 018029 193 GRMYVSAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHA 231 (362)
Q Consensus 193 G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~ 231 (362)
|++|+|.+.+||--........+.||+++|..++....+
T Consensus 45 G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agf 83 (566)
T 1w7p_D 45 GRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF 83 (566)
T ss_dssp ---------------------------------------
T ss_pred ceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeecc
Confidence 999999999999655444456799999999999987654
No 71
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), saccharomyces cerevisi structural genomics, PSI-2; 1.70A {Saccharomyces cerevisiae}
Probab=35.18 E-value=2.1e+02 Score=24.34 Aligned_cols=77 Identities=9% Similarity=0.165 Sum_probs=58.3
Q ss_pred ccceeEEEecceEEEeec-CCC-----ceeEEEeecccceEEEEeccccccCcEEEEEecCCCCCCCCCCCCCCCceeEE
Q 018029 190 LYHGRMYVSAWHICFHSN-AFS-----RQMKVIIPIGDIDEIQRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYK 263 (362)
Q Consensus 190 ~~~G~lyis~~~~cF~S~-~~g-----~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 263 (362)
...|+|-++..-+.|.+. --| ....+.||-.||..++=.+.+ -.+.+.|.++.| ..|.
T Consensus 35 ~~~G~lkla~~glgWK~~~~tG~~~~~~~k~~~i~~sdI~~a~W~r~~-rg~~LrI~~K~g---------------~~~~ 98 (191)
T 3f5r_A 35 KFSGRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGC-RGYDLKINTKNQ---------------GVIQ 98 (191)
T ss_dssp SSCEEEEEETTEEEEEECCSSTTTHHHHCCCEEEEGGGEEEEEEEECS-SSEEEEEEESSS---------------CEEE
T ss_pred CcccEEEEcCCceEEeecCCCCccccccCceEEEcHHHcCeEEEEEcc-CCcEEEEEECCC---------------ceEE
Confidence 346999999999999986 433 114479999999999888865 356788888643 4899
Q ss_pred EeeeechHHHHHHHHHHHHHH
Q 018029 264 FASFWNRNHALRQLQRTAKNY 284 (362)
Q Consensus 264 F~sf~~rd~~~~~l~~~~~~~ 284 (362)
|..|...| |+.|.+.++.+
T Consensus 99 fdGF~~~D--~~~L~~~fk~~ 117 (191)
T 3f5r_A 99 LDGFSQDD--YNLIKNDFHRR 117 (191)
T ss_dssp EEEECGGG--HHHHHHHHHHH
T ss_pred ecCCCHHH--HHHHHHHHHHH
Confidence 99998665 57777777654
No 72
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=29.78 E-value=60 Score=27.23 Aligned_cols=57 Identities=12% Similarity=0.265 Sum_probs=40.7
Q ss_pred hhhhccccceeEEEecceEEEeecCCCceeEEEeecccceE--EEEeccccccCcEEEEEec
Q 018029 184 VIERSFLYHGRMYVSAWHICFHSNAFSRQMKVIIPIGDIDE--IQRSQHAFINPAITIILRM 243 (362)
Q Consensus 184 ~l~~~~~~~G~lyis~~~~cF~S~~~g~~~k~~ip~~di~~--i~k~~~~~~~~~i~i~~~~ 243 (362)
.+....+=.|.|||+...+-|.+. ...-+.|||..|.- |.+...+.-.|.|.+.+..
T Consensus 35 vl~~~~~g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~~~~p~~clY~Qld~ 93 (171)
T 1zyi_A 35 VLNGKGLGTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDLNAYPREHLYVMVNA 93 (171)
T ss_dssp EBTTBCCCEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSCSSCCSCCEEEEEEC
T ss_pred EECCCccCceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCCCCCCCceEEEEEec
Confidence 333333345999999999999886 46779999998864 7776654444577777754
No 73
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=28.69 E-value=1.8e+02 Score=21.68 Aligned_cols=44 Identities=7% Similarity=0.090 Sum_probs=28.8
Q ss_pred ecceEEEeecCCCceeEEEeecccceEEEEeccccccCcEEEEE
Q 018029 198 SAWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIIL 241 (362)
Q Consensus 198 s~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~ 241 (362)
..+.++||.+.-....+-+|++.++..|.......-...+.|.+
T Consensus 42 ~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~ 85 (126)
T 1fao_A 42 HRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVF 85 (126)
T ss_dssp ETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEE
T ss_pred ECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEe
Confidence 44557777655445667789999998887654332233677765
No 74
>1y5o_A TFB1, RNA polymerase II transcription factor B 73 kDa subunit; TFIIH, PH domain, phosphoinositides, VP16; NMR {Saccharomyces cerevisiae} SCOP: b.55.1.9 PDB: 2gs0_A 2k2u_A 2l2i_A 2lox_A*
Probab=22.86 E-value=2.7e+02 Score=21.62 Aligned_cols=47 Identities=13% Similarity=0.230 Sum_probs=33.7
Q ss_pred ceeEEEecc----eEEEeecCCCceeEEEeecccceEEEEeccccccC--cEEEEEe
Q 018029 192 HGRMYVSAW----HICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINP--AITIILR 242 (362)
Q Consensus 192 ~G~lyis~~----~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~--~i~i~~~ 242 (362)
.|-|.|++. .+-|.+ .-| .-.+.||+..|..++-.... .| -+.|+.+
T Consensus 13 ~G~lti~eD~~p~~l~W~p-~~g-~~~isI~l~~It~LQqTp~t--s~KvmLKI~~k 65 (115)
T 1y5o_A 13 SGIIAINEDVSPAELTWRS-TDG-DKVHTVVLSTIDKLQATPAS--SEKMMLRLIGK 65 (115)
T ss_dssp EEEEEEECSSSSCEEEEEE-SSS-SCEEEEESTTCSEEEECCTT--CSSEEEEEEEC
T ss_pred ccEEEEccCCCcceEEEEE-CCC-CccEEEEhhhhhhhhcCCCC--CCceEEEEEEe
Confidence 399999988 777777 456 44599999999999877643 23 3455544
No 75
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.84 E-value=2.5e+02 Score=20.49 Aligned_cols=39 Identities=18% Similarity=0.298 Sum_probs=26.1
Q ss_pred cceEEEeecCCCceeEEEeecccceEEEEeccccccCcEEEEE
Q 018029 199 AWHICFHSNAFSRQMKVIIPIGDIDEIQRSQHAFINPAITIIL 241 (362)
Q Consensus 199 ~~~~cF~S~~~g~~~k~~ip~~di~~i~k~~~~~~~~~i~i~~ 241 (362)
.+.++||.+.-....+-.|++.++..|+... -..+.|.+
T Consensus 34 ~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~----~~~F~i~~ 72 (115)
T 2cod_A 34 GLSISYYNNEKEMYSKGIIPLSAISTVRVQG----DNKFEVVT 72 (115)
T ss_dssp SSEEEEEESSCCSSCCCEEETTTEEEEEEET----TTEEEEEE
T ss_pred CCEEEEEcCCCCcccCCEEECCcceEEEeCC----CCEEEEEe
Confidence 4456666654444566789999999888765 23566664
Done!