Query 018032
Match_columns 362
No_of_seqs 148 out of 1288
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 05:33:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018032.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018032hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 3.5E-51 7.6E-56 360.0 23.3 283 1-332 1-293 (379)
2 PTZ00224 protein phosphatase 2 100.0 7.4E-49 1.6E-53 376.0 32.5 272 1-333 1-274 (381)
3 PLN03145 Protein phosphatase 2 100.0 7.9E-49 1.7E-53 374.6 30.3 260 20-332 63-332 (365)
4 KOG0699 Serine/threonine prote 100.0 2.2E-47 4.8E-52 346.8 23.8 332 1-332 1-505 (542)
5 KOG0698 Serine/threonine prote 100.0 2.4E-43 5.2E-48 335.1 30.1 257 22-338 40-312 (330)
6 PF00481 PP2C: Protein phospha 100.0 4.9E-45 1.1E-49 335.9 14.7 245 23-322 1-254 (254)
7 COG0631 PTC1 Serine/threonine 100.0 2.5E-43 5.5E-48 324.6 21.9 243 20-333 6-255 (262)
8 smart00332 PP2Cc Serine/threon 100.0 5.4E-38 1.2E-42 288.4 29.6 250 19-327 3-255 (255)
9 cd00143 PP2Cc Serine/threonine 100.0 1E-37 2.2E-42 285.9 28.4 249 22-329 1-254 (254)
10 PRK14559 putative protein seri 100.0 2.1E-37 4.5E-42 312.5 24.2 248 20-332 373-637 (645)
11 KOG0700 Protein phosphatase 2C 100.0 7.7E-37 1.7E-41 284.8 18.8 239 35-313 84-379 (390)
12 KOG1323 Serine/threonine phosp 100.0 1.1E-27 2.5E-32 216.3 21.0 236 49-332 143-489 (493)
13 KOG1379 Serine/threonine prote 99.9 6.5E-25 1.4E-29 198.6 20.8 206 34-328 89-329 (330)
14 KOG0618 Serine/threonine phosp 99.9 9.2E-23 2E-27 206.3 17.1 244 22-334 522-776 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 3.4E-20 7.3E-25 165.9 11.6 186 27-291 3-195 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 5.3E-17 1.2E-21 143.0 20.9 186 22-309 4-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 4.4E-14 9.6E-19 147.7 20.8 195 31-329 562-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 1.6E-12 3.5E-17 114.2 19.0 179 49-329 3-192 (193)
19 COG2208 RsbU Serine phosphatas 98.5 1.1E-05 2.3E-10 78.4 19.8 124 159-330 231-366 (367)
20 PRK10693 response regulator of 69.3 86 0.0019 29.4 11.9 31 161-191 227-259 (303)
21 PF09436 DUF2016: Domain of un 55.2 7.7 0.00017 28.2 1.5 31 249-279 11-42 (72)
22 COG3700 AphA Acid phosphatase 36.5 69 0.0015 27.8 4.6 47 264-310 71-128 (237)
23 PF01436 NHL: NHL repeat; Int 30.2 1.1E+02 0.0023 17.4 3.5 21 166-186 8-28 (28)
24 COG2168 DsrH Uncharacterized c 29.3 35 0.00075 26.3 1.5 29 262-290 23-51 (96)
25 PF06972 DUF1296: Protein of u 28.0 1.1E+02 0.0023 21.4 3.6 27 278-307 19-45 (60)
26 COG1539 FolB Dihydroneopterin 26.5 3.1E+02 0.0066 22.0 6.7 62 269-337 43-106 (121)
27 COG3411 Ferredoxin [Energy pro 24.4 1.7E+02 0.0037 20.7 4.1 37 262-298 15-52 (64)
28 PF05402 PqqD: Coenzyme PQQ sy 21.1 2.2E+02 0.0048 19.6 4.4 41 265-307 2-42 (68)
29 cd00534 DHNA_DHNTPE Dihydroneo 20.8 3.6E+02 0.0077 21.1 6.1 58 269-333 42-101 (118)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-51 Score=359.99 Aligned_cols=283 Identities=41% Similarity=0.771 Sum_probs=259.3
Q ss_pred CCCCCCCCCceeeeccCCCCcEEEEEEecCCCCCCCccceeeccCCC---CCceEEEEEcCCCchHHHHHHHHHHHHHHH
Q 018032 1 MGIYLSSPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVL 77 (362)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~~~---~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~ 77 (362)
||..|-.|++.+.-..++.+.++||.+|.||||-.|||++.....+. .+|.||||||||.|+..|.+++++|.+.+.
T Consensus 1 MGaFLdKPkteKhn~~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~ 80 (379)
T KOG0697|consen 1 MGAFLDKPKTEKHNAEGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHII 80 (379)
T ss_pred CCccccCcccccccccCcCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhh
Confidence 89999999999999999999999999999999999999998765443 599999999999999999999999999998
Q ss_pred hcccccC----C---CHHHHHHHHHHHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCC
Q 018032 78 KNKAYAA----G---DVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGP 150 (362)
Q Consensus 78 ~~~~~~~----~---~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (362)
....+.. . ..++=|+..|+.+++.++..++...
T Consensus 81 sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~---------------------------------------- 120 (379)
T KOG0697|consen 81 SSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISK---------------------------------------- 120 (379)
T ss_pred hhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhc----------------------------------------
Confidence 8665542 3 5677899999999998874321111
Q ss_pred CCCCCCCCCCccEEEEEEeCCeEEEEeeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccc
Q 018032 151 HSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARA 230 (362)
Q Consensus 151 ~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tra 230 (362)
..-++|||++.+++...++|++|+||||++++|+|+...-|.||.+.++.|++||..+||.+.-.|+||.|+++|+
T Consensus 121 ----~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMIqRvNGsLAVSRA 196 (379)
T KOG0697|consen 121 ----GSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMIQRVNGSLAVSRA 196 (379)
T ss_pred ----ccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHHHHhcCCCeEEEEEecceeeeehh
Confidence 2344899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccccccccCCeEeeecceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhc
Q 018032 231 IGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLA 310 (362)
Q Consensus 231 lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~ 310 (362)
|||++||.....++..+.|+++|+|+...-..+++||||++||+||+++++|+++.++.-+....++..+++.+++.++.
T Consensus 197 lGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLh 276 (379)
T KOG0697|consen 197 LGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLH 276 (379)
T ss_pred ccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998878889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceEEEEEcCCC
Q 018032 311 PSTAGGEGCDNMTMIIVQFKKP 332 (362)
Q Consensus 311 ~~~~~~~~~DNiTvIvv~~~~~ 332 (362)
.|++||+|+||+.|...
T Consensus 277 -----KGSRDNMsivlvcfp~A 293 (379)
T KOG0697|consen 277 -----KGSRDNMSIVLVCFPGA 293 (379)
T ss_pred -----ccCccCceEEEEecCCC
Confidence 99999999999999764
No 2
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=7.4e-49 Score=375.96 Aligned_cols=272 Identities=33% Similarity=0.562 Sum_probs=236.8
Q ss_pred CCCCCCCCCceeeeccCCCCcEEEEEEecCCCCCCCccceeeccCCCCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 018032 1 MGIYLSSPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNK 80 (362)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~~~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~ 80 (362)
||.+|++|...+.++...+..+.+|+++.+|+|+.|||++++.. .++..+|||||||||..+|+++++.|...+.+..
T Consensus 1 mg~~l~~p~~~~~~~~~~~~~~~~g~~s~~G~R~~nED~~~v~~--~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~ 78 (381)
T PTZ00224 1 MGIMLPKPVLSKLVDRAGNSIFRCASACVNGYRESMEDAHLLYL--TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEP 78 (381)
T ss_pred CCccCCCCccccccccCCCccEEEEEEeCCCCCCCCCCeeEecc--CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999999999988654 3355799999999999999999999998876532
Q ss_pred cccCCCHHHHHHHHHHHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 018032 81 AYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSG 160 (362)
Q Consensus 81 ~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 160 (362)
. ....+.|.+++..+++.+... ...+|
T Consensus 79 ~---~~~~~~l~~a~~~~d~~i~~~--------------------------------------------------~~~~G 105 (381)
T PTZ00224 79 E---PMTDERMEELCLEIDEEWMDS--------------------------------------------------GREGG 105 (381)
T ss_pred c---cccHHHHHHHHHHHHHHHHhc--------------------------------------------------ccCCC
Confidence 1 123456889999999887632 12359
Q ss_pred ccEEEEEEe-CCeEEEEeeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCcccccc
Q 018032 161 STACVAIIR-NNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQN 239 (362)
Q Consensus 161 tT~~~~~i~-~~~l~~anvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~ 239 (362)
||+++++|. ++++++|||||||+|++++|++++||+||++.++.|+.||...++.+..+|.+|.+.+||+||+..+|..
T Consensus 106 sTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~Rv~G~l~vTRalGd~~~K~~ 185 (381)
T PTZ00224 106 STGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVSNRVDGDLAVSRAFGDRSFKVK 185 (381)
T ss_pred CeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEeccccccCceeeecccCCcccccc
Confidence 999988886 5799999999999999999999999999999999999999999999999999999999999999988866
Q ss_pred ccccccCCeEeeecceEEEEecCCCeEEEEecCCCcc-cCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCC
Q 018032 240 KFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWD-CMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEG 318 (362)
Q Consensus 240 ~~~~~~~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d-~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~ 318 (362)
.......+.|+++|++..+.+ .++|+|||||||||+ +++++++.+++.+.+....++..+|+.|++.|+. +|+
T Consensus 186 ~~~~~~~~~v~~~Pdi~~~~l-~~~D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~-----rGs 259 (381)
T PTZ00224 186 GTGDYLEQKVIAVPDVTHLTC-QSNDFIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIR-----RGS 259 (381)
T ss_pred cccccccCcceeeeEEEEEEC-CCCCEEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh-----cCC
Confidence 432233456789999999999 788999999999999 8999999999987655557899999999999999 999
Q ss_pred CCCceEEEEEcCCCC
Q 018032 319 CDNMTMIIVQFKKPI 333 (362)
Q Consensus 319 ~DNiTvIvv~~~~~~ 333 (362)
.||||||||++....
T Consensus 260 ~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 260 KDNISCLIVQLKDGA 274 (381)
T ss_pred CCCEEEEEEEeeCCC
Confidence 999999999998653
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=7.9e-49 Score=374.59 Aligned_cols=260 Identities=33% Similarity=0.605 Sum_probs=222.6
Q ss_pred CcEEEEEEecCCCCCCCccceeeccCCC----------CCceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCCCHHH
Q 018032 20 DRLRYGLSSMQGWRATMEDAHAAYPDLD----------DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGT 89 (362)
Q Consensus 20 ~~~~~~~~s~~G~r~~neD~~~~~~~~~----------~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~ 89 (362)
..+++|.++.+|.|+.|||++++..++. .+..||||||||||+.+++++++.|++.+.+...+. ..+.+
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~-~~~~~ 141 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFP-REIEK 141 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccc-hhHHH
Confidence 4479999999999999999998765431 245799999999999999999999999998754442 46788
Q ss_pred HHHHHHHHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEe
Q 018032 90 SVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIR 169 (362)
Q Consensus 90 ~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~ 169 (362)
+|.++|..+++.+.+... ......+|||+++++|.
T Consensus 142 al~~af~~~d~~~~~~~~---------------------------------------------~~~~~~~GTTavv~li~ 176 (365)
T PLN03145 142 VVSSAFLQTDTAFAEACS---------------------------------------------LDASLASGTTALAALVV 176 (365)
T ss_pred HHHHHHHHHhHHHHhhhc---------------------------------------------cccCCCCcCcEEEEEEE
Confidence 999999999998763210 00123489999999999
Q ss_pred CCeEEEEeeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeE
Q 018032 170 NNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIV 249 (362)
Q Consensus 170 ~~~l~~anvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v 249 (362)
++++|+||+||||||+++++++++||.||++.++.|++||.+.|+.+..++.+|.+.+||+|||..+|.... ....++
T Consensus 177 ~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~--~~~~~v 254 (365)
T PLN03145 177 GRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKG--SDGGPL 254 (365)
T ss_pred CCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCceecceECCcccccccccccccccccc--ccCCCc
Confidence 999999999999999999999999999999999999999999999999889999999999999988764221 112346
Q ss_pred eeecceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEc
Q 018032 250 TANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 329 (362)
Q Consensus 250 ~~~p~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~ 329 (362)
+++|++..+++...+.||||||||||++++++++++++.+.+....++..+|+.|++.|+. +++.||+|||||.|
T Consensus 255 s~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~-----rgs~DNITvIVV~l 329 (365)
T PLN03145 255 SAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK-----RKSGDNLAVVVVCF 329 (365)
T ss_pred ceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh-----CCCCCCEEEEEEEe
Confidence 8899999999965677889999999999999999999988776667899999999999999 89999999999999
Q ss_pred CCC
Q 018032 330 KKP 332 (362)
Q Consensus 330 ~~~ 332 (362)
...
T Consensus 330 ~~~ 332 (365)
T PLN03145 330 QSQ 332 (365)
T ss_pred ecC
Confidence 874
No 4
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-47 Score=346.76 Aligned_cols=332 Identities=48% Similarity=0.826 Sum_probs=273.4
Q ss_pred CCCCCCCCCceeeeccCCCCcEEEEEEecCCCCCCCccceeeccCCCCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcc
Q 018032 1 MGIYLSSPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNK 80 (362)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~~~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~ 80 (362)
||.|||.|.+.+.++.+..+-+.||++++||||..+||++-+..++++++.+|+|+|||||.++|+|++..|+.++.+..
T Consensus 1 MGAYLs~P~t~K~s~dg~g~lL~yg~s~MQGWRvsqEDAHNci~~ld~~t~mF~VYDGHGG~EVa~yca~kLPdflK~~k 80 (542)
T KOG0699|consen 1 MGAYLSKPITEKESEDGSGNLLSYGCSTMQGWRVSQEDAHNCIVDLDTDTHMFGVYDGHGGTEVAKYCAAKLPDFLKERK 80 (542)
T ss_pred CcccccCCccccccccccCccchhchhhhhccccchhhhhcccccccCcceEEEEecCCCcHHHHHHHHHhhhHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCHHHHHHHHHHHHHHHHhcccchhHHHhhhc---------------------------------------ccc--
Q 018032 81 AYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGD---------------------------------------KIN-- 119 (362)
Q Consensus 81 ~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~---------------------------------------~~~-- 119 (362)
.+...++..+|++||...+..|.......+|+.+.+ ...
T Consensus 81 ~yk~g~~~~aL~~AFl~fD~~l~~ee~~keLk~iag~~~~k~~~aeaDd~deed~a~l~EEa~~pl~ElL~rY~G~~~hK 160 (542)
T KOG0699|consen 81 FYKAGDVAEALQKAFLDFDDFLRAEESMKELKDIAGEGKPKKAGAEADDEDEEDRADLIEEASVPLAELLKRYGGAGVHK 160 (542)
T ss_pred hhhcccHHHHHHHHHhchhhhhcCHHHHHHHHHHcCCCCcccccccccccchHHHHHHHHhccCcHHHHHHHhcCCCccc
Confidence 888899999999999998776654422222222211 000
Q ss_pred -ccccccc-c-cc------------------c--------CC--------------------------------CC--CC
Q 018032 120 -KFTGMIE-G-LI------------------W--------SP--------------------------------RG--GD 136 (362)
Q Consensus 120 -~~~~~~~-~-~~------------------~--------~~--------------------------------~~--~~ 136 (362)
+++-..+ + .+ . .| ++ +.
T Consensus 161 ~~~sp~~~~g~~s~e~~~~~~~~~eA~p~dst~~~ps~~~~p~A~A~~~~~s~~d~~te~g~~k~~g~~~g~~g~~~~S~ 240 (542)
T KOG0699|consen 161 SLLSPFLAKGDVSDESEDEDEDEEEAEPQDSTEREPSENEDPMASAEVVIESAEDKETEEGSPKKKGQKRGQKGHPIQSE 240 (542)
T ss_pred cccChhhhccCCccCCCcccccccccCCCCccccCcccccCCcccceeccccccccccccCCCCCCCcccccCCCcchhh
Confidence 0000000 0 00 0 00 00 00
Q ss_pred CCC----CCCCcccc-------------------------CC--------------------------------------
Q 018032 137 SND----QPNDWAFE-------------------------EG-------------------------------------- 149 (362)
Q Consensus 137 ~~~----~~~~~~~~-------------------------~~-------------------------------------- 149 (362)
++. ...-+.+. ..
T Consensus 241 s~Kl~q~sKsef~fE~~~sS~d~~D~a~~EEeD~~k~~d~sd~~sse~~eneed~Ded~e~e~ddEE~~e~~map~~~~~ 320 (542)
T KOG0699|consen 241 SKKLNQSSKSEFDFETAPSSSDGVDGAATEEEDEVKSPDDSDAESSEFVENEEDDDEDAEDEQDDEEMVEGSMAPLLLGS 320 (542)
T ss_pred hhhcccccccccccccCCCcccccccccccccccccCCcccccccchhcccccccccccccccchhhhhhhccccccccc
Confidence 000 00000000 00
Q ss_pred CCCCCCCCCCCccEEEEEEeCCeEEEEeeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcCCeEe-cccccCccccc
Q 018032 150 PHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH-AGRVNGSLNLA 228 (362)
Q Consensus 150 ~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~-~~~~~g~~~~t 228 (362)
.-....+..+|||++||++.+.+|++||.|||||+++|+|+.+-|+.||.+....|..||..+||.|. .+|+||.|.++
T Consensus 321 ~g~EePG~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLS 400 (542)
T KOG0699|consen 321 GGAEEPGEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLS 400 (542)
T ss_pred ccCcCCCCCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchh
Confidence 00011456689999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred cccCCccccccccccccCCeEeeecceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHH
Q 018032 229 RAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERC 308 (362)
Q Consensus 229 ralG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a 308 (362)
|+|||..||....+....+.|++-|+|....|.++++|+|+++||||.+++.++++++|+..+..+..+..+++.|++.+
T Consensus 401 RA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~C 480 (542)
T KOG0699|consen 401 RAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDAC 480 (542)
T ss_pred hhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999888999999999999999999999999999998899999999999999
Q ss_pred hcCCCCC-CCCCCCceEEEEEcCCC
Q 018032 309 LAPSTAG-GEGCDNMTMIIVQFKKP 332 (362)
Q Consensus 309 ~~~~~~~-~~~~DNiTvIvv~~~~~ 332 (362)
+.....+ +.+.||||+|++.|...
T Consensus 481 LAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 481 LAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred cCCCCCCCCcCCCcceEEEEEeccc
Confidence 9977665 56889999999999854
No 5
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-43 Score=335.06 Aligned_cols=257 Identities=45% Similarity=0.700 Sum_probs=223.9
Q ss_pred EEEEEEecCCCCCCCccceeeccCCC------C-CceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCC--CHHHHHH
Q 018032 22 LRYGLSSMQGWRATMEDAHAAYPDLD------D-STSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAG--DVGTSVQ 92 (362)
Q Consensus 22 ~~~~~~s~~G~r~~neD~~~~~~~~~------~-~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~--~~~~~l~ 92 (362)
...+.++.+|+|..|||++....... . ...||||||||||..+|+|+.++|+..+.++...... .+..++.
T Consensus 40 ~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~ 119 (330)
T KOG0698|consen 40 RLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALR 119 (330)
T ss_pred cceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHH
Confidence 44556688999999999998876532 2 4789999999999999999999999999998877754 4899999
Q ss_pred HHHH-HHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEeCC
Q 018032 93 KAFF-RMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNN 171 (362)
Q Consensus 93 ~a~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~ 171 (362)
++|. .++..+.... .+...+|||++++++.++
T Consensus 120 ~~F~~~~D~~~~~~~-----------------------------------------------~~~~~~gstav~~vi~~~ 152 (330)
T KOG0698|consen 120 RAFLTKTDSEFLEKR-----------------------------------------------EDNRSGGSTAVVALIKKG 152 (330)
T ss_pred HHHHHHHHHHHHhhc-----------------------------------------------cCCCCCcceeeeeeEecC
Confidence 9999 5999887420 012457888888888865
Q ss_pred -eEEEEeeccccEEEEeCC-ceeecCcCCCCCCHHHHHHHHHcCCeEec----ccccCccccccccCCcccccccccccc
Q 018032 172 -HLIVANAGDSRCVISRKG-QAYNLSRDHKPDLEAEKERILKAGGFIHA----GRVNGSLNLARAIGDMEFKQNKFLSAE 245 (362)
Q Consensus 172 -~l~~anvGDSra~l~~~g-~~~~lT~dH~~~~~~e~~ri~~~~~~~~~----~~~~g~~~~tralG~~~~k~~~~~~~~ 245 (362)
+||+||+|||||+|++.| ...+||.||.+....|+.||.+.||.+.. .|++|.|+++|+|||..+|.
T Consensus 153 ~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~------- 225 (330)
T KOG0698|consen 153 RKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKS------- 225 (330)
T ss_pred CEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcC-------
Confidence 999999999999999866 89999999999999999999999999983 59999999999999999985
Q ss_pred CCeEeeecceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEE
Q 018032 246 KQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMI 325 (362)
Q Consensus 246 ~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvI 325 (362)
++|+++|++....+...++||||+||||||+++++|++++|+..+.....+..++..+.+.|.. +++.||||||
T Consensus 226 -~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~-----~~s~Dnitvv 299 (330)
T KOG0698|consen 226 -QGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALS-----RGSKDNITVV 299 (330)
T ss_pred -CcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhh-----cCCCCCeEEE
Confidence 3789999999999977789999999999999999999999999765557889999999999999 9999999999
Q ss_pred EEEcCCCCCCCCC
Q 018032 326 IVQFKKPIQSTSS 338 (362)
Q Consensus 326 vv~~~~~~~~~~~ 338 (362)
||.|.......+.
T Consensus 300 vV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 300 VVRLKSSPKSPSS 312 (330)
T ss_pred EEEecCccccccC
Confidence 9999988655544
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=4.9e-45 Score=335.92 Aligned_cols=245 Identities=42% Similarity=0.719 Sum_probs=206.4
Q ss_pred EEEEEecCCCCCCCccceeeccCC-----CCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCC-CHHHHHHHHHH
Q 018032 23 RYGLSSMQGWRATMEDAHAAYPDL-----DDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAG-DVGTSVQKAFF 96 (362)
Q Consensus 23 ~~~~~s~~G~r~~neD~~~~~~~~-----~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~-~~~~~l~~a~~ 96 (362)
.+|+.+.+|+|..|||++++..++ ..+..+|||||||||..+++++++.++..+.+....... .+.++|..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 479999999999999999988754 348889999999999999999999999888887666645 68999999999
Q ss_pred H-HHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEeCCeEEE
Q 018032 97 R-MDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIV 175 (362)
Q Consensus 97 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~ 175 (362)
. ++..+....... ....+|||+++++|.+++||+
T Consensus 81 ~~~~~~~~~~~~~~---------------------------------------------~~~~~GsTa~v~li~~~~l~v 115 (254)
T PF00481_consen 81 AFTDESLYSDSENN---------------------------------------------ESSKSGSTATVALIDGNKLYV 115 (254)
T ss_dssp HHHHHHHHHHHHHH---------------------------------------------THTTSEEEEEEEEEETTEEEE
T ss_pred eccccccccccccc---------------------------------------------ccccccccccccccccceeEE
Confidence 9 888776411000 124579999999999999999
Q ss_pred EeeccccEEEEeCCcee-ecCcCCCCCCHHHHHHHHHcCCeEe-cccccCccccccccCCccccccccccccCCeEeeec
Q 018032 176 ANAGDSRCVISRKGQAY-NLSRDHKPDLEAEKERILKAGGFIH-AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANP 253 (362)
Q Consensus 176 anvGDSra~l~~~g~~~-~lT~dH~~~~~~e~~ri~~~~~~~~-~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p 253 (362)
||+||||+|+++++... +||.||++.++.|+.||.+.|+.+. ..|.+|.+.+||+|||..+|.+. +++|+++|
T Consensus 116 anvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~-----~~~v~~~P 190 (254)
T PF00481_consen 116 ANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPG-----KPGVIAEP 190 (254)
T ss_dssp EEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCT-----SSSSB---
T ss_pred Eeeeeeeeeeeeccccccccccccccchhhccceeeccccccccchhhhhccccccccccccccccc-----cceeeeec
Confidence 99999999999999888 9999999999999999999999999 88999999999999999998743 56899999
Q ss_pred ceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCc
Q 018032 254 DINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNM 322 (362)
Q Consensus 254 ~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNi 322 (362)
+|..+++...+.|||||||||||+++++++++++++....+..+..+|+.|++.|+. +|+.|||
T Consensus 191 ~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~-----~gs~DNi 254 (254)
T PF00481_consen 191 DISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIA-----RGSKDNI 254 (254)
T ss_dssp EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH-----TTHHSHE
T ss_pred ccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh-----cCCCCCC
Confidence 999999955556999999999999999999999999876656799999999999999 9999996
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-43 Score=324.56 Aligned_cols=243 Identities=28% Similarity=0.439 Sum_probs=209.3
Q ss_pred CcEEEEEEecCC-CCCCCccceeeccCCCCC-ceEEEEEcCCCchHHHHHHHHHHHHHHHhccccc---CCC--HHHHHH
Q 018032 20 DRLRYGLSSMQG-WRATMEDAHAAYPDLDDS-TSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYA---AGD--VGTSVQ 92 (362)
Q Consensus 20 ~~~~~~~~s~~G-~r~~neD~~~~~~~~~~~-~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~---~~~--~~~~l~ 92 (362)
..+.++..+..| .|.+|||++++..+...+ ..|++|||||||+.++++|++.+.+.+.+..... ... ..+.|.
T Consensus 6 ~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~ 85 (262)
T COG0631 6 LSLKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLK 85 (262)
T ss_pred ceeeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 345666666666 688999999998743322 4699999999999999999999988888753221 111 678999
Q ss_pred HHHHHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEeCCe
Q 018032 93 KAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNH 172 (362)
Q Consensus 93 ~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~ 172 (362)
+++..+++.+...... ......+|||++++++.+++
T Consensus 86 ~~~~~~n~~i~~~~~~--------------------------------------------~~~~~~mgtTl~~~~~~~~~ 121 (262)
T COG0631 86 EAILKANEAIAEEGQL--------------------------------------------NEDVRGMGTTLVLLLIRGNK 121 (262)
T ss_pred HHHHHHHHHHHHhhhc--------------------------------------------ccccCCCceeEEEEEEECCe
Confidence 9999999988854210 00346799999999999999
Q ss_pred EEEEeeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeEeee
Q 018032 173 LIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTAN 252 (362)
Q Consensus 173 l~~anvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~ 252 (362)
+|+|||||||+|++++|.+++||.||++.+..++.|+..+++...+++++ ++||+||+.. ...
T Consensus 122 l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~~~~~~~~~---~ltralG~~~--------------~~~ 184 (262)
T COG0631 122 LYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEEARSHPRRN---ALTRALGDFD--------------LLE 184 (262)
T ss_pred EEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHHHHhCccch---hhhhhcCCCc--------------ccc
Confidence 99999999999999999999999999999999999999999999999999 9999999987 588
Q ss_pred cceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEcCCC
Q 018032 253 PDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKP 332 (362)
Q Consensus 253 p~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~~~~ 332 (362)
|++....+ ++++||||||||||+.++++++.++++. ..+++.+++++++.|+. +++.||+|+|++++...
T Consensus 185 p~~~~~~~-~~~d~llL~SDGl~d~v~~~~i~~il~~----~~~~~~~~~~li~~a~~-----~g~~DNiT~ilv~~~~~ 254 (262)
T COG0631 185 PDITELEL-EPGDFLLLCSDGLWDVVSDDEIVDILKN----SETPQEAADKLIELALE-----GGGPDNITVVLVRLNGE 254 (262)
T ss_pred eeEEEEEc-CCCCEEEEECCCCccCcCHHHHHHHHhc----CCCHHHHHHHHHHHHHh-----cCCCCceEEEEEEeecc
Confidence 99999999 7779999999999999999999999997 46899999999999999 99999999999999865
Q ss_pred C
Q 018032 333 I 333 (362)
Q Consensus 333 ~ 333 (362)
.
T Consensus 255 ~ 255 (262)
T COG0631 255 G 255 (262)
T ss_pred c
Confidence 4
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=5.4e-38 Score=288.37 Aligned_cols=250 Identities=48% Similarity=0.752 Sum_probs=214.4
Q ss_pred CCcEEEEEEecCCCCCCCccceeeccCCCCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCC---CHHHHHHHHH
Q 018032 19 NDRLRYGLSSMQGWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAG---DVGTSVQKAF 95 (362)
Q Consensus 19 ~~~~~~~~~s~~G~r~~neD~~~~~~~~~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~---~~~~~l~~a~ 95 (362)
...+.+++++.+|.|..|||++++......+..+|+|||||||..+++++++.+.+.+.+....... .+.+.|.+++
T Consensus 3 ~~~~~~~~~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (255)
T smart00332 3 NLGLRYGLSSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAF 82 (255)
T ss_pred CCceeEEEecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHH
Confidence 4568888899999999999999987644367889999999999999999999999988876443322 5788899999
Q ss_pred HHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEeCCeEEE
Q 018032 96 FRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIV 175 (362)
Q Consensus 96 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~ 175 (362)
..+++.+........ ....+|||++++++..+++++
T Consensus 83 ~~~~~~~~~~~~~~~--------------------------------------------~~~~~gtT~~~~~~~~~~l~~ 118 (255)
T smart00332 83 LKTDEEILEELESLE--------------------------------------------EDAGSGSTAVVALISGNKLYV 118 (255)
T ss_pred HHHHHHHHHhhhhcc--------------------------------------------CCCCCCccEEEEEEECCEEEE
Confidence 999998875321000 124589999999999999999
Q ss_pred EeeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeEeeecce
Q 018032 176 ANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDI 255 (362)
Q Consensus 176 anvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p~i 255 (362)
+|+||||+|+++++++.++|.||++.+..+..|+...++.+..++.++...+||++|+..+|. ++...|++
T Consensus 119 ~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~~~~~lt~~~g~~~~~~---------~i~~~p~~ 189 (255)
T smart00332 119 ANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVINGRVNGVLALSRAIGDFFLKP---------YVSAEPDV 189 (255)
T ss_pred EeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECCeECCeEecccccCCHhhcC---------CeEeeeEE
Confidence 999999999999999999999999999999999999999888777777789999999887663 47889999
Q ss_pred EEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEE
Q 018032 256 NSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIV 327 (362)
Q Consensus 256 ~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv 327 (362)
...++..++++|||||||||++++++++.+++...... .++..+|+.|++.|.. ++..||+|+||+
T Consensus 190 ~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~-~~~~~~~~~l~~~a~~-----~~~~Dn~T~ivv 255 (255)
T smart00332 190 TVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSK-SDPEEAAKRLIDLALA-----RGSKDNITVIVV 255 (255)
T ss_pred EEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHH-----cCCCCCeEEEEC
Confidence 99996578999999999999999999999999886322 2689999999999999 899999999985
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1e-37 Score=285.89 Aligned_cols=249 Identities=40% Similarity=0.690 Sum_probs=209.4
Q ss_pred EEEEEEecCCCCCCCccceeeccCCC-CCceEEEEEcCCCchHHHHHHHHHHHHHHHhccccc----CCCHHHHHHHHHH
Q 018032 22 LRYGLSSMQGWRATMEDAHAAYPDLD-DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYA----AGDVGTSVQKAFF 96 (362)
Q Consensus 22 ~~~~~~s~~G~r~~neD~~~~~~~~~-~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~----~~~~~~~l~~a~~ 96 (362)
+.+++++.+|.|..|||++++..... .+..+|+|||||||+..++++++.+.+.+.+..... ...+...|.++|.
T Consensus 1 ~~~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 80 (254)
T cd00143 1 FSAGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFL 80 (254)
T ss_pred CceeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 35788999999999999999876322 267899999999999999999999998888765433 3567788999999
Q ss_pred HHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEeCCeEEEE
Q 018032 97 RMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVA 176 (362)
Q Consensus 97 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~a 176 (362)
.+++.+....... .....+|||++++++.+++++++
T Consensus 81 ~~~~~l~~~~~~~--------------------------------------------~~~~~~gtT~~~~~~~~~~l~~~ 116 (254)
T cd00143 81 RADEEILEEAQDE--------------------------------------------PDDARSGTTAVVALIRGNKLYVA 116 (254)
T ss_pred HHHHHHHHhhhhc--------------------------------------------cCCCCCCCcEEEEEEECCEEEEE
Confidence 9999887432110 02355799999999999999999
Q ss_pred eeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeEeeecceE
Q 018032 177 NAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDIN 256 (362)
Q Consensus 177 nvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p~i~ 256 (362)
|+||||+|++++++++++|.||++.++.++.|+...++.....+..+...+||+||+..+|. ++...|++.
T Consensus 117 ~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~~~~~~t~~lG~~~~~~---------~~~~~~~~~ 187 (254)
T cd00143 117 NVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSNGRVPGVLAVTRALGDFDLKP---------GVSAEPDVT 187 (254)
T ss_pred EecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEEeCEEcCceeeccccCCccccC---------CEEcCCeEE
Confidence 99999999999999999999999999889999999998765455555568999999987663 358889999
Q ss_pred EEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEc
Q 018032 257 SVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 329 (362)
Q Consensus 257 ~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~ 329 (362)
.+++.+++++|||||||||+++++++|.+++...... .++..+|++|++.|.. .++.||+|+||+.+
T Consensus 188 ~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~-~~~~~~a~~l~~~a~~-----~~~~Dn~t~i~~~~ 254 (254)
T cd00143 188 VVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAK-EDLQEAAQELVDLALR-----RGSHDNITVVVVRL 254 (254)
T ss_pred EEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcc-cCHHHHHHHHHHHHHh-----CCCCCCEEEEEEeC
Confidence 9988778999999999999999999999999885211 2789999999999999 88999999999875
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=2.1e-37 Score=312.46 Aligned_cols=248 Identities=20% Similarity=0.281 Sum_probs=178.9
Q ss_pred CcEEEEEEecCCC-CCCCccceeeccCC------C----CCceEEEEEcCCCchHHHH----HHHHHHHHHHHhcccccC
Q 018032 20 DRLRYGLSSMQGW-RATMEDAHAAYPDL------D----DSTSFFGVYDGHGGKVVAK----FCAKFLHQQVLKNKAYAA 84 (362)
Q Consensus 20 ~~~~~~~~s~~G~-r~~neD~~~~~~~~------~----~~~~l~~V~DG~GG~~aa~----~a~~~l~~~l~~~~~~~~ 84 (362)
..+.++..+++|. |+.|||++.+.... . ....+|+|||||||+.+++ ++++.|.++|.+.....
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~- 451 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDE- 451 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccc-
Confidence 3588999999995 99999998775421 0 1356899999999876554 55555555554432111
Q ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEE
Q 018032 85 GDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTAC 164 (362)
Q Consensus 85 ~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~ 164 (362)
....+.|.+++..+++.|.+...... .....++|||++
T Consensus 452 ~~~~~~L~~ai~~AN~~I~~~~~~~~------------------------------------------~~~~~~MGTTlv 489 (645)
T PRK14559 452 LPDEETIREAIYLANEAIYDLNQQNA------------------------------------------RSGSGRMGTTLV 489 (645)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcc------------------------------------------cccCCCCCceee
Confidence 23467789999999998864211000 002345899999
Q ss_pred EEEEeCCeEEEEeeccccEEEE-eCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCcccccccccc
Q 018032 165 VAIIRNNHLIVANAGDSRCVIS-RKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLS 243 (362)
Q Consensus 165 ~~~i~~~~l~~anvGDSra~l~-~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~ 243 (362)
++++.++++|++||||||+|++ ++|++++||+||++.+.+.+.++... ....+. +...+||+||+...+
T Consensus 490 ~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~~Gi~~~-~a~~~p---~~~~LTrALG~~~~~------ 559 (645)
T PRK14559 490 MALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQRGVEPQ-IAYARP---DAYQLTQALGPRDNS------ 559 (645)
T ss_pred eEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHHhCCCHH-HHhcCc---ccceeeeccCCCCCC------
Confidence 9999999999999999999998 56899999999998766555443221 111122 334899999986532
Q ss_pred ccCCeEeeecceEEEEecCCCeEEEEecCCCccc-CCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCc
Q 018032 244 AEKQIVTANPDINSVELCDDDDFVVLACDGIWDC-MSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNM 322 (362)
Q Consensus 244 ~~~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d~-l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNi 322 (362)
..+|++..+.+ .++++||||||||||. +-...+.+.+...+....++..++++|++.|+. +++.||+
T Consensus 560 ------~l~Pdi~~~~L-~~gD~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~-----~gg~DNI 627 (645)
T PRK14559 560 ------AIQPDIQFLEI-EEDTLLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQ-----YNGHDNI 627 (645)
T ss_pred ------cccceEEEEEc-CCCCEEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-----cCCCCcE
Confidence 45799999999 7899999999999994 223223333333333356899999999999999 8999999
Q ss_pred eEEEEEcCCC
Q 018032 323 TMIIVQFKKP 332 (362)
Q Consensus 323 TvIvv~~~~~ 332 (362)
|+||+++...
T Consensus 628 TvIvV~l~~~ 637 (645)
T PRK14559 628 TAILVRLKVR 637 (645)
T ss_pred EEEEEEeccC
Confidence 9999999754
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-37 Score=284.76 Aligned_cols=239 Identities=30% Similarity=0.453 Sum_probs=192.2
Q ss_pred CCccceeeccCCCCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcc-------------cc-------------------
Q 018032 35 TMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNK-------------AY------------------- 82 (362)
Q Consensus 35 ~neD~~~~~~~~~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~-------------~~------------------- 82 (362)
.-||++-+..-..+++.|+||||||||..++++++++|+.++..+. ..
T Consensus 84 ~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~ 163 (390)
T KOG0700|consen 84 AEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSAD 163 (390)
T ss_pred cccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccC
Confidence 3467666555446789999999999999999999999999887211 00
Q ss_pred c-CCCHHHHHHHHHHHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCc
Q 018032 83 A-AGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGS 161 (362)
Q Consensus 83 ~-~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt 161 (362)
. ...+.++|.+||.++++.+...- ...+ . ....-.-+|+
T Consensus 164 ~~~~~v~~al~~Af~~tee~fl~~v-~~~~------------------------~---------------~~p~lA~~GS 203 (390)
T KOG0700|consen 164 QRHGDVLEALSKAFEATEEDFLEMV-DKQL------------------------Q---------------ENPELALVGS 203 (390)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-HHhh------------------------c---------------cchhhhhhcc
Confidence 1 35688999999999999987321 0000 0 0012244799
Q ss_pred cEEEEEEeCCeEEEEeeccccEEEEe---CC---ceeecCcCCCCCCHHHHHHHHHcCC----eEe--cccccCcccccc
Q 018032 162 TACVAIIRNNHLIVANAGDSRCVISR---KG---QAYNLSRDHKPDLEAEKERILKAGG----FIH--AGRVNGSLNLAR 229 (362)
Q Consensus 162 T~~~~~i~~~~l~~anvGDSra~l~~---~g---~~~~lT~dH~~~~~~e~~ri~~~~~----~~~--~~~~~g~~~~tr 229 (362)
|++++++.++.||+||+|||||+|.. .+ ...|||.||+..++.|++||..++. .+. +.|+.|.+++||
T Consensus 204 C~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsR 283 (390)
T KOG0700|consen 204 CCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSR 283 (390)
T ss_pred eEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeee
Confidence 99999999999999999999999964 33 4899999999999999999999874 333 459999999999
Q ss_pred ccCCccccccccc------------cccCCeEeeecceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCH
Q 018032 230 AIGDMEFKQNKFL------------SAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKI 297 (362)
Q Consensus 230 alG~~~~k~~~~~------------~~~~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~ 297 (362)
||||..+|++.+. -..+|+++++|.|+.++|.+.+.||||+|||||++++++|++++|.+.+.....-
T Consensus 284 AfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd 363 (390)
T KOG0700|consen 284 AFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPD 363 (390)
T ss_pred eccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCC
Confidence 9999999988754 2347999999999999997788999999999999999999999999976543344
Q ss_pred HHHHHHHHHHHhcCCC
Q 018032 298 SAVCERVLERCLAPST 313 (362)
Q Consensus 298 ~~~a~~l~~~a~~~~~ 313 (362)
..+|+.|++.|+.+..
T Consensus 364 ~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 364 GNPATHLIRHALGRAA 379 (390)
T ss_pred CCHHHHHHHHHHhhhh
Confidence 5799999999988543
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-27 Score=216.31 Aligned_cols=236 Identities=25% Similarity=0.429 Sum_probs=186.9
Q ss_pred CceEEEEEcCCCchHHHHHHHHHHHHHHHhccc----c-----------------------c------------CCCHHH
Q 018032 49 STSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKA----Y-----------------------A------------AGDVGT 89 (362)
Q Consensus 49 ~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~----~-----------------------~------------~~~~~~ 89 (362)
++.+|.+||||.|..+|-.|++.+...+.+... . . +.-+..
T Consensus 143 ~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViG 222 (493)
T KOG1323|consen 143 DGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIG 222 (493)
T ss_pred cceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhHH
Confidence 788999999999999999988888776654311 0 0 011467
Q ss_pred HHHHHHHHHHHHHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEe
Q 018032 90 SVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIR 169 (362)
Q Consensus 90 ~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~ 169 (362)
+|..||+.++++|..+.+. -...+|||+++++.-
T Consensus 223 AlEsAFqemDeqiarer~~----------------------------------------------~~~~GGCtalvvi~l 256 (493)
T KOG1323|consen 223 ALESAFQEMDEQIARERQV----------------------------------------------WRLPGGCTALVVIVL 256 (493)
T ss_pred HHHHHHHHHHHHHHHHHHh----------------------------------------------hcCCCCceEEEeeee
Confidence 8999999999999854211 235689999999999
Q ss_pred CCeEEEEeeccccEEEEeCCceeecCcCCCCCCHHHHHHHHHcC--------CeEe------------------------
Q 018032 170 NNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAG--------GFIH------------------------ 217 (362)
Q Consensus 170 ~~~l~~anvGDSra~l~~~g~~~~lT~dH~~~~~~e~~ri~~~~--------~~~~------------------------ 217 (362)
-++||+||.||||++++|+++++.|+.+.++.. ||+|+...+ ..+.
T Consensus 257 lGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~M 334 (493)
T KOG1323|consen 257 LGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNM 334 (493)
T ss_pred ccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeecccc
Confidence 999999999999999999999999999998754 677766532 1111
Q ss_pred -----------------------cccccCccccccccCCccccccccccccCCeEeeecceEEEEec----CCCeEEEEe
Q 018032 218 -----------------------AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELC----DDDDFVVLA 270 (362)
Q Consensus 218 -----------------------~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~----~~~d~lIL~ 270 (362)
.-|+.+.+.+||.|||..+|.-+..-.-+|++++.|+|...+|. ..+|++||+
T Consensus 335 tGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvila 414 (493)
T KOG1323|consen 335 TGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILA 414 (493)
T ss_pred ccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEe
Confidence 22233567899999999999988888889999999999999983 367899999
Q ss_pred cCCCcccCCHHHHHHHHHHHhhcCC--CH---HHHHHHHHHHHhcCCCC--------CCCCCCCceEEEEEcCCC
Q 018032 271 CDGIWDCMSSQQLVDFIHEQLHSES--KI---SAVCERVLERCLAPSTA--------GGEGCDNMTMIIVQFKKP 332 (362)
Q Consensus 271 SDGl~d~l~~~ei~~iv~~~~~~~~--~~---~~~a~~l~~~a~~~~~~--------~~~~~DNiTvIvv~~~~~ 332 (362)
||||||+++++|+..+|+..+...+ +| ..+|+.++..|...... +-++.|||||.||-+...
T Consensus 415 tDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 415 TDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred cCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 9999999999999999999987653 33 46788888887663222 256789999999998765
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=6.5e-25 Score=198.60 Aligned_cols=206 Identities=22% Similarity=0.361 Sum_probs=155.2
Q ss_pred CCCccceeeccCCCCCceEEEEEcCCCchH----HHHHHHHHHHHHHHh---cccccCCCHHHHHHHHHHHHHHHHhccc
Q 018032 34 ATMEDAHAAYPDLDDSTSFFGVYDGHGGKV----VAKFCAKFLHQQVLK---NKAYAAGDVGTSVQKAFFRMDEMMKGQR 106 (362)
Q Consensus 34 ~~neD~~~~~~~~~~~~~l~~V~DG~GG~~----aa~~a~~~l~~~l~~---~~~~~~~~~~~~l~~a~~~~~~~i~~~~ 106 (362)
+.-||++++..+ ....+.|||||+|||. -+-..++.|...+.+ ...+...++...|.+|+.++...-
T Consensus 89 ~~GEDa~Fvss~--~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~~---- 162 (330)
T KOG1379|consen 89 KGGEDAWFVSSN--PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQK---- 162 (330)
T ss_pred CCCCcceeeccC--cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhhcC----
Confidence 456999999884 4667899999999982 223445555554443 445556789999999999866521
Q ss_pred chhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEe--CCeEEEEeeccccEE
Q 018032 107 GWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIR--NNHLIVANAGDSRCV 184 (362)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGDSra~ 184 (362)
...-++||++++.++ +++||+||+|||-..
T Consensus 163 ------------------------------------------------~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~ 194 (330)
T KOG1379|consen 163 ------------------------------------------------VPIVGSSTACILALDRENGKLHTANLGDSGFL 194 (330)
T ss_pred ------------------------------------------------CCCCCcceeeeeeeecCCCeEEEeeccCcceE
Confidence 123379999999998 899999999999999
Q ss_pred EEeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccc-------cCCccccccccccccCCeEeeecceEE
Q 018032 185 ISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARA-------IGDMEFKQNKFLSAEKQIVTANPDINS 257 (362)
Q Consensus 185 l~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tra-------lG~~~~k~~~~~~~~~~~v~~~p~i~~ 257 (362)
++|+|++.+-|..+...- |-.++++.. ++|. ....+.++
T Consensus 195 VvR~G~vv~~S~~Q~H~F-------------------N~PyQLs~~p~~~~~~~~d~---------------p~~ad~~~ 240 (330)
T KOG1379|consen 195 VVREGKVVFRSPEQQHYF-------------------NTPYQLSSPPEGYSSYISDV---------------PDSADVTS 240 (330)
T ss_pred EEECCEEEEcCchheecc-------------------CCceeeccCCccccccccCC---------------ccccceEE
Confidence 999999999998754211 111122221 2221 33457888
Q ss_pred EEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHhcCC------------------CCCCCC
Q 018032 258 VELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLH-SESKISAVCERVLERCLAPS------------------TAGGEG 318 (362)
Q Consensus 258 ~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~-~~~~~~~~a~~l~~~a~~~~------------------~~~~~~ 318 (362)
+++ ++||+|||+||||||++.+++|..++..... ...+++..|++|.+.|.... ..++|+
T Consensus 241 ~~v-~~GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK 319 (330)
T KOG1379|consen 241 FDV-QKGDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGK 319 (330)
T ss_pred Eec-cCCCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCC
Confidence 888 9999999999999999999999999998876 55789999999999997622 224668
Q ss_pred CCCceEEEEE
Q 018032 319 CDNMTMIIVQ 328 (362)
Q Consensus 319 ~DNiTvIvv~ 328 (362)
.||||+||..
T Consensus 320 ~DdITvvls~ 329 (330)
T KOG1379|consen 320 PDDITVVLSS 329 (330)
T ss_pred cccEEEEEec
Confidence 9999999975
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=9.2e-23 Score=206.25 Aligned_cols=244 Identities=20% Similarity=0.380 Sum_probs=208.0
Q ss_pred EEEEEEecCCCCCCCccceeeccC-CCCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHH
Q 018032 22 LRYGLSSMQGWRATMEDAHAAYPD-LDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDE 100 (362)
Q Consensus 22 ~~~~~~s~~G~r~~neD~~~~~~~-~~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~ 100 (362)
|.+|++...|+|.++.-+.....+ ..+....||.+||-+..+...++...+..++.++.... ++-.+.|..+|.++++
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~-~~et~~mr~~fl~~~r 600 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFFLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLY-GNETEQMRNTFLRLNR 600 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhcccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhc-cChHHHHHHHHHHHhh
Confidence 889999999999998877665554 34677899999999999999999999999999876655 3444559999999999
Q ss_pred HHhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEeC--------Ce
Q 018032 101 MMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRN--------NH 172 (362)
Q Consensus 101 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~--------~~ 172 (362)
++... +..-|..++.+.|.. .+
T Consensus 601 klg~~--------------------------------------------------g~~lg~~~~~~~i~~d~~~~asS~~ 630 (1081)
T KOG0618|consen 601 KLGEE--------------------------------------------------GQVLGGSVVLCQIVEDSLSPASSKT 630 (1081)
T ss_pred hhhhh--------------------------------------------------hccccchhhheeecccccCcccchh
Confidence 98643 223355555555543 46
Q ss_pred EEEEeeccccEEEEeCCceeecCcCCC-CCCHHHHHHHHHcCCeEe-cccccCccccccccCCccccccccccccCCeEe
Q 018032 173 LIVANAGDSRCVISRKGQAYNLSRDHK-PDLEAEKERILKAGGFIH-AGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVT 250 (362)
Q Consensus 173 l~~anvGDSra~l~~~g~~~~lT~dH~-~~~~~e~~ri~~~~~~~~-~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~ 250 (362)
++.||+|+|.++++++|+..++|+-.. ...++|.+||...+|++. .++++|+...||++|..... |.|.
T Consensus 631 l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~---------P~v~ 701 (1081)
T KOG0618|consen 631 LFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLF---------PHVL 701 (1081)
T ss_pred hhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecCCCeeeceeeeeeeccccccc---------cccc
Confidence 899999999999999999999988764 348899999999999999 88999999999999987643 4689
Q ss_pred eecceEEEEecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEcC
Q 018032 251 ANPDINSVELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFK 330 (362)
Q Consensus 251 ~~p~i~~~~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~~ 330 (362)
+.|+|....|.+.++|||+++.+||++++-+++++.+++ ..+|-.+|++|++.|.. .|..||++++||++.
T Consensus 702 p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn----~~dpL~AAkKL~d~AqS-----Ygc~~nv~vlVv~l~ 772 (1081)
T KOG0618|consen 702 PDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRN----VEDPLLAAKKLCDLAQS-----YGCAENVSVLVVRLN 772 (1081)
T ss_pred CCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhc----CCchHHHHHHHHHHHHh-----cccccCeeEEEEEee
Confidence 999999999988999999999999999999999999996 57899999999999999 999999999999997
Q ss_pred CCCC
Q 018032 331 KPIQ 334 (362)
Q Consensus 331 ~~~~ 334 (362)
....
T Consensus 773 ~~~~ 776 (1081)
T KOG0618|consen 773 HLEE 776 (1081)
T ss_pred cchh
Confidence 6544
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.83 E-value=3.4e-20 Score=165.88 Aligned_cols=186 Identities=23% Similarity=0.350 Sum_probs=99.8
Q ss_pred EecCCCCCCCccceeeccCCCCCceEEEEEcCCCch----HHHHHHHHHHHHHHHhcccccCCC-HHHHHHHHHHHHHHH
Q 018032 27 SSMQGWRATMEDAHAAYPDLDDSTSFFGVYDGHGGK----VVAKFCAKFLHQQVLKNKAYAAGD-VGTSVQKAFFRMDEM 101 (362)
Q Consensus 27 ~s~~G~r~~neD~~~~~~~~~~~~~l~~V~DG~GG~----~aa~~a~~~l~~~l~~~~~~~~~~-~~~~l~~a~~~~~~~ 101 (362)
.+++|.+..|||++.+.. ..+..+++||||+||. .+|+++++.+.+.+.+........ ....++.+...+...
T Consensus 3 ~sh~~~~~~nqD~~~~~~--~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRT--DDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSI 80 (212)
T ss_dssp ----TTSSS--EEEEEE---TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeee--CCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 467889999999999765 3466777999999965 555556666666666544332111 223333333333322
Q ss_pred HhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEeCCeEEEEeeccc
Q 018032 102 MKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDS 181 (362)
Q Consensus 102 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDS 181 (362)
+.... ...... .....++||++++++.++.++++|+|||
T Consensus 81 ~~~~~-~~~~~~----------------------------------------~~~~~~~tTl~~~v~~~~~~~~~~iGD~ 119 (212)
T PF13672_consen 81 VRAFQ-SAKQAD----------------------------------------LELRDYGTTLLALVIDPDKVYIFNIGDS 119 (212)
T ss_dssp H-----HHHHHS----------------------------------------GGGTT-EE-EEEEEEETTEEEEEEESS-
T ss_pred hhhhh-hhhhcc----------------------------------------ccccccCceEEEEEEECCEEEEEEECCC
Confidence 10000 000000 0234579999999999999999999999
Q ss_pred cEEE-EeCCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeEeeecceEEEEe
Q 018032 182 RCVI-SRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVEL 260 (362)
Q Consensus 182 ra~l-~~~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p~i~~~~l 260 (362)
|+|+ .++|++.+++.+|+. +.. .-|+.+.... .....++..+++
T Consensus 120 ~i~~~~~~g~~~~l~~~~~~----~~~------------------~~~~~~~~~~-------------~~~~~~~~~~~~ 164 (212)
T PF13672_consen 120 RIYVIRRNGEIQQLTDDHSG----EYP------------------NQTRSLTGDD-------------PEPDVQYGSIPL 164 (212)
T ss_dssp EEEEEEETTEEEE-S---BH----HHH------------------HCTTSCCHHC-------------CCTETEEEEEE-
T ss_pred eEEEEECCCEEEEcCCCccc----hhh------------------hhhhccCccc-------------cccCCeEEEEEc
Confidence 9965 589999999999972 111 1133333221 022336666666
Q ss_pred cCCCeEEEEecCCCcccCCHHH-HHHHHHHHh
Q 018032 261 CDDDDFVVLACDGIWDCMSSQQ-LVDFIHEQL 291 (362)
Q Consensus 261 ~~~~d~lIL~SDGl~d~l~~~e-i~~iv~~~~ 291 (362)
.+++.|+|||||||+.+...+ +..++.+.+
T Consensus 165 -~~~d~ilL~SDG~~~~l~~~~~~~~~l~~~~ 195 (212)
T PF13672_consen 165 -EEGDVILLCSDGVWDNLRSYEDLEQFLKDLW 195 (212)
T ss_dssp --TT-EEEEE-HHHHTTS-HHHHHHHH-----
T ss_pred -CCCCEEEEECcCccccCCCHHHHHHHhhhcc
Confidence 889999999999999998654 677776653
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.77 E-value=5.3e-17 Score=143.01 Aligned_cols=186 Identities=18% Similarity=0.202 Sum_probs=134.5
Q ss_pred EEEEEEecCCCCCCCccceeeccCCCCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHH
Q 018032 22 LRYGLSSMQGWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEM 101 (362)
Q Consensus 22 ~~~~~~s~~G~r~~neD~~~~~~~~~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~ 101 (362)
+.++.....+ ....-|.|.+.. ..++..+++|+||||+...|.+++..+...+.+..... .. +.+.+..+++.
T Consensus 4 ~~~~~~~~p~-~~~~GD~~~~~~-~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-~~----~~~~l~~~n~~ 76 (193)
T smart00331 4 GLIAQYYEDA-TQVGGDFYDVVK-LPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-IS----LSQILERLNRA 76 (193)
T ss_pred eEEEEEEcch-HhcCccEEEEEE-eCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-CC----HHHHHHHHHHH
Confidence 3444444444 467788887665 23346789999999988888888888888887654332 23 44455556665
Q ss_pred HhcccchhHHHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEE--eCCeEEEEeec
Q 018032 102 MKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAII--RNNHLIVANAG 179 (362)
Q Consensus 102 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i--~~~~l~~anvG 179 (362)
+... ....+++|++++++ ..++++++|+|
T Consensus 77 l~~~-------------------------------------------------~~~~~~~T~~~~~id~~~~~l~~~~~G 107 (193)
T smart00331 77 IYEN-------------------------------------------------GEDGMFATLFLALYDFAGGTLSYANAG 107 (193)
T ss_pred HHhc-------------------------------------------------CCCCcEEEEEEEEEECCCCEEEEEeCC
Confidence 5521 12346999999998 67899999999
Q ss_pred cccEEEEe-CCceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeEeeecceEEE
Q 018032 180 DSRCVISR-KGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSV 258 (362)
Q Consensus 180 DSra~l~~-~g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p~i~~~ 258 (362)
|+|+|+++ ++...+++.+ .++.+|... ...+++..+
T Consensus 108 d~~~~~~~~~~~~~~~~~~-----------------------------~~~~lG~~~--------------~~~~~~~~~ 144 (193)
T smart00331 108 HSPPYLLRADGGLVEDLDD-----------------------------LGAPLGLEP--------------DVEVDVREL 144 (193)
T ss_pred CCceEEEECCCCeEEEcCC-----------------------------CCceeeeCC--------------CCcceeEEE
Confidence 99999998 5555555543 234566443 334667788
Q ss_pred EecCCCeEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHh
Q 018032 259 ELCDDDDFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLERCL 309 (362)
Q Consensus 259 ~l~~~~d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~ 309 (362)
++ .++|.|+|+|||||+.+..+++.+++.+.. ..++..+++++++.+.
T Consensus 145 ~l-~~gd~l~l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 145 TL-EPGDLLLLYTDGLTEARNPERLEELLEELL--GSPPAEIAQRILEELL 192 (193)
T ss_pred ee-CCCCEEEEECCCccccCChHHHHHHHHHhc--CCCHHHHHHHHHHHHh
Confidence 88 899999999999999999999999999863 3578889999888754
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.61 E-value=4.4e-14 Score=147.75 Aligned_cols=195 Identities=17% Similarity=0.208 Sum_probs=133.6
Q ss_pred CCCCCCccceeeccCCCCCceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHhcccchhH
Q 018032 31 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRE 110 (362)
Q Consensus 31 G~r~~neD~~~~~~~~~~~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~ 110 (362)
+.+..+.|.|.+.. ..++...++|+||+|+...|..++..+.+.+.+..... -++ ..++..+|+.+...
T Consensus 562 ~g~~vsGD~y~~~~-l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g-~~~----~~ai~~lN~~L~~~----- 630 (764)
T TIGR02865 562 DGELVSGDSYSFGK-LSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG-FDR----EVAIKTVNSILSLR----- 630 (764)
T ss_pred CCCcccCceEEEEE-ECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC-CCH----HHHHHHHHHHHHhC-----
Confidence 44678999987765 33455688999999955555555555555444322111 223 44555555554321
Q ss_pred HHhhhcccccccccccccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEe--CCeEEEEeeccccEEEEeC
Q 018032 111 LAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIR--NNHLIVANAGDSRCVISRK 188 (362)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGDSra~l~~~ 188 (362)
....+.+|+.+++++ .+++.++|+|+++.|+.++
T Consensus 631 --------------------------------------------~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~ 666 (764)
T TIGR02865 631 --------------------------------------------STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRG 666 (764)
T ss_pred --------------------------------------------CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEEC
Confidence 012257999998885 6889999999999999999
Q ss_pred CceeecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeEeeecceEEEEecCCCeEEE
Q 018032 189 GQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVV 268 (362)
Q Consensus 189 g~~~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~~~d~lI 268 (362)
++..+++..+.+ +|-.. ..+++....++ .+||+||
T Consensus 667 ~~v~~i~s~~lP------------------------------lGil~--------------~~~~~~~~~~L-~~GD~Ll 701 (764)
T TIGR02865 667 AKVEVIRSSNLP------------------------------IGILD--------------EVDVELVRKKL-KNGDLIV 701 (764)
T ss_pred CEEEEecCCCce------------------------------eEecc--------------CCccceEEEEe-CCCCEEE
Confidence 988888654332 23111 33466677788 9999999
Q ss_pred EecCCCcccCCHHH-----HHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEc
Q 018032 269 LACDGIWDCMSSQQ-----LVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 329 (362)
Q Consensus 269 L~SDGl~d~l~~~e-----i~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~ 329 (362)
|+|||+||..++.+ +.+++.+. ...+|+++++.|++.+..... +...||+|++++++
T Consensus 702 l~SDGv~E~~~~~~~~~~~l~~~l~~~--~~~~p~ela~~Il~~a~~~~~--~~~~DD~Tvlvirv 763 (764)
T TIGR02865 702 MVSDGVLEGEKEVEGKVLWLVRKLKET--NTNDPEEIAEYLLEKAKELRS--GKIKDDMTVIVAKV 763 (764)
T ss_pred EECCCCCcCCcccccHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHhcC--CCCCCCeEEEEEEe
Confidence 99999999876433 56666543 235899999999999986321 23589999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.51 E-value=1.6e-12 Score=114.20 Aligned_cols=179 Identities=22% Similarity=0.308 Sum_probs=116.4
Q ss_pred CceEEEEEcCCCchHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHhcccchhHHHhhhccccccccccccc
Q 018032 49 STSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGL 128 (362)
Q Consensus 49 ~~~l~~V~DG~GG~~aa~~a~~~l~~~l~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (362)
+..+++|+|+.|....|.+.+..+...+....... .++.+.+..+...+...+.
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-~~p~~~l~~ln~~l~~~~~------------------------- 56 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-LDPEELLEALNRRLYRDLK------------------------- 56 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-TSHHHHHHHHHHHHHHHTT-------------------------
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHhh-------------------------
Confidence 45689999999966666666666666666543222 3355555544444433322
Q ss_pred ccCCCCCCCCCCCCCccccCCCCCCCCCCCCCccEEEEEEe--CCeEEEEeeccccEEEEeCC--ceeecCcCCCCCCHH
Q 018032 129 IWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIR--NNHLIVANAGDSRCVISRKG--QAYNLSRDHKPDLEA 204 (362)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~~anvGDSra~l~~~g--~~~~lT~dH~~~~~~ 204 (362)
.....+|++++.+. .++++++|+|++++++++++ ....+.....+
T Consensus 57 ---------------------------~~~~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~---- 105 (193)
T PF07228_consen 57 ---------------------------GDNRYATACYAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEGPP---- 105 (193)
T ss_dssp ---------------------------TTSTTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSSBB----
T ss_pred ---------------------------hccccceEEEEEecccceEEEEeCCCCCCEEEEeccccceeecccCccc----
Confidence 11257888888875 56799999999999999983 34444332221
Q ss_pred HHHHHHHcCCeEecccccCccccccccCCccccccccccccCCeEeeecceEEEEecCCCeEEEEecCCCcccCCHH---
Q 018032 205 EKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWDCMSSQ--- 281 (362)
Q Consensus 205 e~~ri~~~~~~~~~~~~~g~~~~tralG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d~l~~~--- 281 (362)
+|-.. ...+....+++ ++||.|+|+||||++....+
T Consensus 106 --------------------------lG~~~--------------~~~~~~~~~~l-~~gd~l~l~TDGl~e~~~~~~~~ 144 (193)
T PF07228_consen 106 --------------------------LGIFE--------------DIDYQEQEIQL-EPGDRLLLYTDGLFEALNEDGEF 144 (193)
T ss_dssp --------------------------CSSSC--------------TTCEEEEEEE---TTEEEEEECHHHCTTTCHHCHH
T ss_pred --------------------------eeeec--------------cccccceEEEe-ccccEEEEeCCChhhccCCccch
Confidence 44322 23344566777 89999999999999998443
Q ss_pred ----HHHHHHHHHhhcCCCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEc
Q 018032 282 ----QLVDFIHEQLHSESKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQF 329 (362)
Q Consensus 282 ----ei~~iv~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~ 329 (362)
.+.+++.+. ...+++.+++.+++.+.. .......||+|++++++
T Consensus 145 ~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~--~~~~~~~DD~tvl~~~~ 192 (193)
T PF07228_consen 145 FGEERLLELLDEN--RGLSPQEIIDALLEAIDR--FGKGPLRDDITVLVIRR 192 (193)
T ss_dssp CCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHH--HTTSSTSS-EEEEEEEE
T ss_pred hHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHH--hcCCCCCCceEEEEEEE
Confidence 334555543 246789999999988876 12256889999999986
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.53 E-value=1.1e-05 Score=78.44 Aligned_cols=124 Identities=19% Similarity=0.291 Sum_probs=89.0
Q ss_pred CCccEEEEEEe--CCeEEEEeeccccEEEEeCCce---eecCcCCCCCCHHHHHHHHHcCCeEecccccCccccccccCC
Q 018032 159 SGSTACVAIIR--NNHLIVANAGDSRCVISRKGQA---YNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 233 (362)
Q Consensus 159 ~GtT~~~~~i~--~~~l~~anvGDSra~l~~~g~~---~~lT~dH~~~~~~e~~ri~~~~~~~~~~~~~g~~~~tralG~ 233 (362)
+-+|+...+++ .+.+.++|+|---.++.+.++. ..++ .....+|.
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~------------------------------~~g~piG~ 280 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT------------------------------ALGLPIGL 280 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc------------------------------CCCceeee
Confidence 57788888875 6789999999999999887542 2222 23445564
Q ss_pred ccccccccccccCCeEeeecceEEEEecCCCeEEEEecCCCcc-------cCCHHHHHHHHHHHhhcCCCHHHHHHHHHH
Q 018032 234 MEFKQNKFLSAEKQIVTANPDINSVELCDDDDFVVLACDGIWD-------CMSSQQLVDFIHEQLHSESKISAVCERVLE 306 (362)
Q Consensus 234 ~~~k~~~~~~~~~~~v~~~p~i~~~~l~~~~d~lIL~SDGl~d-------~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~ 306 (362)
.. ...+.+....+ ++||.|+|.|||+.+ .+..+....++... ...++..+++.+.+
T Consensus 281 ~~--------------~~~~~~~~~~l-~~gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~i~~ 343 (367)
T COG2208 281 LP--------------DYQYEVASLQL-EPGDLLVLYTDGVTEARNSDGEFFGLERLLKILGRL--LGQPAEEILEAILE 343 (367)
T ss_pred cC--------------CccchheeEEe-cCCCEEEEEcCCeeeeecCCccEecHHHHHHHHHHH--hCCCHHHHHHHHHH
Confidence 43 45566777777 779999999999999 56667777777752 35678888888887
Q ss_pred HHhcCCCCCCCCCCCceEEEEEcC
Q 018032 307 RCLAPSTAGGEGCDNMTMIIVQFK 330 (362)
Q Consensus 307 ~a~~~~~~~~~~~DNiTvIvv~~~ 330 (362)
...... ......||+|++++++.
T Consensus 344 ~l~~~~-~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 344 SLEELQ-GDQIQDDDITLLVLKVK 366 (367)
T ss_pred HHHHhh-CCccccCceEEEEEEec
Confidence 766522 11445688999999875
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=69.27 E-value=86 Score=29.35 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=22.7
Q ss_pred ccEEEEEEe--CCeEEEEeeccccEEEEeCCce
Q 018032 161 STACVAIIR--NNHLIVANAGDSRCVISRKGQA 191 (362)
Q Consensus 161 tT~~~~~i~--~~~l~~anvGDSra~l~~~g~~ 191 (362)
-|+++++++ .+++.++|.|-...++..+++.
T Consensus 227 ~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 227 FPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred eeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 477777775 5679999999999885444433
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=55.18 E-value=7.7 Score=28.20 Aligned_cols=31 Identities=16% Similarity=0.296 Sum_probs=21.5
Q ss_pred EeeecceEEEE-ecCCCeEEEEecCCCcccCC
Q 018032 249 VTANPDINSVE-LCDDDDFVVLACDGIWDCMS 279 (362)
Q Consensus 249 v~~~p~i~~~~-l~~~~d~lIL~SDGl~d~l~ 279 (362)
....|....+. +...|..+|+++||+|=.+.
T Consensus 11 ~v~vPr~g~l~~l~~~G~Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 11 TVMVPRFGALEPLERPGHRLLVASNGVFLEVR 42 (72)
T ss_pred EeecCCCCCCCccccCCcEEEEecCcEEEEEe
Confidence 34445554444 34589999999999997654
No 22
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=36.47 E-value=69 Score=27.81 Aligned_cols=47 Identities=19% Similarity=0.359 Sum_probs=36.4
Q ss_pred CeEEEEecCCCc-----------ccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhc
Q 018032 264 DDFVVLACDGIW-----------DCMSSQQLVDFIHEQLHSESKISAVCERVLERCLA 310 (362)
Q Consensus 264 ~d~lIL~SDGl~-----------d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~a~~ 310 (362)
+|-++..|.|+| |+|.++.+.+.+.+....-.-|.++|..|++.-..
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 688999999998 45667777777777655556688999999987666
No 23
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=30.25 E-value=1.1e+02 Score=17.41 Aligned_cols=21 Identities=24% Similarity=0.455 Sum_probs=16.6
Q ss_pred EEEeCCeEEEEeeccccEEEE
Q 018032 166 AIIRNNHLIVANAGDSRCVIS 186 (362)
Q Consensus 166 ~~i~~~~l~~anvGDSra~l~ 186 (362)
++-.++.+|++-.|..|+.++
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 334889999999999988654
No 24
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=29.35 E-value=35 Score=26.25 Aligned_cols=29 Identities=21% Similarity=0.471 Sum_probs=24.9
Q ss_pred CCCeEEEEecCCCcccCCHHHHHHHHHHH
Q 018032 262 DDDDFVVLACDGIWDCMSSQQLVDFIHEQ 290 (362)
Q Consensus 262 ~~~d~lIL~SDGl~d~l~~~ei~~iv~~~ 290 (362)
.++|-|+|+.||++-.+...+..+-+++.
T Consensus 23 ~~~D~vlL~qdGV~aAl~~~~~~~sl~~~ 51 (96)
T COG2168 23 TEGDAVLLLQDGVYAALKGNRYLASLRES 51 (96)
T ss_pred cccCeEEEEcccchhhhcCcHHHHHHhcC
Confidence 78899999999999999888887777663
No 25
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=28.02 E-value=1.1e+02 Score=21.36 Aligned_cols=27 Identities=15% Similarity=0.303 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Q 018032 278 MSSQQLVDFIHEQLHSESKISAVCERVLER 307 (362)
Q Consensus 278 l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~ 307 (362)
-+++||..++.+. .-+|..++++|+.+
T Consensus 19 hse~eIya~L~ec---nMDpnea~qrLL~q 45 (60)
T PF06972_consen 19 HSEEEIYAMLKEC---NMDPNEAVQRLLSQ 45 (60)
T ss_pred CCHHHHHHHHHHh---CCCHHHHHHHHHhc
Confidence 4788999999887 77999999999873
No 26
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=26.46 E-value=3.1e+02 Score=22.04 Aligned_cols=62 Identities=18% Similarity=0.322 Sum_probs=48.5
Q ss_pred EecCCCcccCCHHHHHHHHHHHhhcC--CCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEcCCCCCCCC
Q 018032 269 LACDGIWDCMSSQQLVDFIHEQLHSE--SKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPIQSTS 337 (362)
Q Consensus 269 L~SDGl~d~l~~~ei~~iv~~~~~~~--~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~~~~~~~~~ 337 (362)
..||-+-+.+.-.++.+.+.+.+... .-++.+|++|.+..+. ....++.+=+.+..|....+
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~~~~LiE~lA~~ia~~l~~-------~~~~v~~~~v~v~KP~ap~~ 106 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGKRFALIETLAEEIADLLLA-------RFPRVELVEVKVTKPKAPIP 106 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHh-------hCCccEEEEEEEECCCCCCC
Confidence 45788999999999999998887655 4568889999988877 33788888888888754443
No 27
>COG3411 Ferredoxin [Energy production and conversion]
Probab=24.42 E-value=1.7e+02 Score=20.74 Aligned_cols=37 Identities=14% Similarity=0.395 Sum_probs=29.1
Q ss_pred CCCeEEEEecCCCc-ccCCHHHHHHHHHHHhhcCCCHH
Q 018032 262 DDDDFVVLACDGIW-DCMSSQQLVDFIHEQLHSESKIS 298 (362)
Q Consensus 262 ~~~d~lIL~SDGl~-d~l~~~ei~~iv~~~~~~~~~~~ 298 (362)
+.+-.++..-||+| ..++.+++.+|+.+++..++.++
T Consensus 15 ~~gPvl~vYpegvWY~~V~p~~a~rIv~~hl~~Gr~Ve 52 (64)
T COG3411 15 QDGPVLVVYPEGVWYTRVDPEDARRIVQSHLLGGRPVE 52 (64)
T ss_pred ccCCEEEEecCCeeEeccCHHHHHHHHHHHHhCCCcch
Confidence 45678999999999 57899999999988766555443
No 28
>PF05402 PqqD: Coenzyme PQQ synthesis protein D (PqqD); InterPro: IPR008792 This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.; PDB: 3G2B_A.
Probab=21.08 E-value=2.2e+02 Score=19.62 Aligned_cols=41 Identities=17% Similarity=0.321 Sum_probs=17.2
Q ss_pred eEEEEecCCCcccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Q 018032 265 DFVVLACDGIWDCMSSQQLVDFIHEQLHSESKISAVCERVLER 307 (362)
Q Consensus 265 d~lIL~SDGl~d~l~~~ei~~iv~~~~~~~~~~~~~a~~l~~~ 307 (362)
+++||-.++-. +.-++....+.+.+....+..++++.+.+.
T Consensus 2 e~vll~~~~~~--~~Ln~~a~~Iw~~~~g~~t~~ei~~~l~~~ 42 (68)
T PF05402_consen 2 EYVLLDPESGE--FTLNETAAFIWELLDGPRTVEEIVDALAEE 42 (68)
T ss_dssp EEEEE------------THHHHHHHH--SSS-HHHHHHHHHHH
T ss_pred CEEEEeCCCCC--ccccHHHHHHHHHccCCCCHHHHHHHHHHH
Confidence 34444444443 344555666666665556677777777665
No 29
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=20.78 E-value=3.6e+02 Score=21.14 Aligned_cols=58 Identities=17% Similarity=0.291 Sum_probs=42.8
Q ss_pred EecCCCcccCCHHHHHHHHHHHhhcC--CCHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEcCCCC
Q 018032 269 LACDGIWDCMSSQQLVDFIHEQLHSE--SKISAVCERVLERCLAPSTAGGEGCDNMTMIIVQFKKPI 333 (362)
Q Consensus 269 L~SDGl~d~l~~~ei~~iv~~~~~~~--~~~~~~a~~l~~~a~~~~~~~~~~~DNiTvIvv~~~~~~ 333 (362)
-.||-+-+.++-..+.+.+.+.+... +.++.+|+.|.+..+. . .+.+.-+-+++.++.
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~-----~--~~~v~~v~v~v~K~~ 101 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLE-----D--YPKVSAIKVKVEKPN 101 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHH-----h--CCCceEEEEEEECCC
Confidence 46899989999999999988876543 4678899999999887 3 244555666666553
Done!