BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018036
(362 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G VAVK+L + + E+ + HRN++RL+ FC LLVY YM N
Sbjct: 61 DGTLVAVKRL-KEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 119
Query: 265 GSLGEVLHGKRGSF--LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
GS+ L + S L W R +IA+ +A+GL+YLH C P IIHRDVK+ NILL+ +F
Sbjct: 120 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 179
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
EA V DFGLAK L D AV G+ G+IAP
Sbjct: 180 EAVVGDFGLAK-LMDYKDXHVXXAVRGTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G VAVK+L + + E+ + HRN++RL+ FC LLVY YM N
Sbjct: 53 DGXLVAVKRL-KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMAN 111
Query: 265 GSLGEVLHGKRGSF--LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
GS+ L + S L W R +IA+ +A+GL+YLH C P IIHRDVK+ NILL+ +F
Sbjct: 112 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
EA V DFGLAK L D AV G G+IAP
Sbjct: 172 EAVVGDFGLAK-LMDYKDXHVXXAVRGXIGHIAP 204
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 88/155 (56%), Gaps = 6/155 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHD--NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
N VAVKKL + ++ + EI+ + K +H N+V L F S+ + LVY YM
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 263 PNGSLGEVLHGKRGSF-LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
PNGSL + L G+ L W MR KIA AA G+++LH + IHRD+KS NILL+
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 169
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
F A ++DFGLA+ + + S + G+ Y+AP
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 87/155 (56%), Gaps = 6/155 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHD--NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
N VAVKKL + ++ + EI+ + K +H N+V L F S+ + LVY YM
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 263 PNGSLGEVLHGKRGSF-LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
PNGSL + L G+ L W MR KIA AA G+++LH + IHRD+KS NILL+
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 169
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
F A ++DFGLA+ + + + G+ Y+AP
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHD--NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
N VAVKKL + ++ + EI+ + K +H N+V L F S+ + LVY YM
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 263 PNGSLGEVLHGKRGSF-LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
PNGSL + L G+ L W MR KIA AA G+++LH + IHRD+KS NILL+
Sbjct: 107 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 163
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
F A ++DFGLA+ + + G+ Y+AP
Sbjct: 164 FTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 238 RHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKR--GSFLKWEMRLKIAIEAAKGL 295
RH ++V L FC + +L+Y+YM NG+L L+G + WE RL+I I AA+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 296 SYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIA 355
YLH + IIHRDVKS NILL+ +F + DFG++K + G + V G+ GYI
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 356 P 356
P
Sbjct: 210 P 210
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHD--NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
N VAVKKL + ++ + EI+ K +H N+V L F S+ + LVY Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 263 PNGSLGEVLHGKRGSF-LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
PNGSL + L G+ L W R KIA AA G+++LH + IHRD+KS NILL+
Sbjct: 104 PNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEA 160
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
F A ++DFGLA+ + S + G+ Y AP
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 238 RHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKR--GSFLKWEMRLKIAIEAAKGL 295
RH ++V L FC + +L+Y+YM NG+L L+G + WE RL+I I AA+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 296 SYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIA 355
YLH + IIHRDVKS NILL+ +F + DFG++K + + V G+ GYI
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 356 P 356
P
Sbjct: 210 P 210
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
MS N SG IP EIG L L+L N +SG IP ++ + LN L++S N+L+ +P+
Sbjct: 636 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 695
Query: 61 EMGNMKSLTSADFSHNNFSGEIPEFGQYSFFNSTSFTGNPHLCGSYLNPCNYS 113
M + LT D S+NN SG IPE GQ+ F F NP LCG L C+ S
Sbjct: 696 AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 748
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 4 NNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG 63
N+ +G IP + +C L ++ LS N L+G IP I ++ L L +S N + ++P E+G
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 532
Query: 64 NMKSLTSADFSHNNFSGEIP 83
+ +SL D + N F+G IP
Sbjct: 533 DCRSLIWLDLNTNLFNGTIP 552
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+S NNFS IP +G C L +LD+S N LSG I+ L LN+S NQ +P
Sbjct: 204 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP 262
Query: 61 EMGNMKSLTSADFSHNNFSGEIPEF 85
+KSL + N F+GEIP+F
Sbjct: 263 L--PLKSLQYLSLAENKFTGEIPDF 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+ N F+G IP + +C L L LS N+LSG IP + + L L + N L +P+
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 61 EMGNMKSLTSADFSHNNFSGEIP 83
E+ +K+L + N+ +GEIP
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIP 480
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 4 NNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG 63
N G IP E+ + L L L N L+G IP ++ LN++++S N+L +PK +G
Sbjct: 449 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 64 NMKSLTSADFSHNNFSGEIP-EFGQ 87
+++L S+N+FSG IP E G
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGD 533
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MSRNNFSGIIPVEI-GHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLP 59
++ N F+G IP + G C LT LDLS NH G +P +L L +S N + LP
Sbjct: 273 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332
Query: 60 KE-MGNMKSLTSADFSHNNFSGEIPE 84
+ + M+ L D S N FSGE+PE
Sbjct: 333 MDTLLKMRGLKVLDLSFNEFSGELPE 358
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+S N SG IP +G L L L N L G IP ++ + L L + +N L +P
Sbjct: 422 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 481
Query: 61 EMGNMKSLTSADFSHNNFSGEIPEF 85
+ N +L S+N +GEIP++
Sbjct: 482 GLSNCTNLNWISLSNNRLTGEIPKW 506
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+S N +G IP IG L L LS N SG IP ++ L +L+++ N N ++P
Sbjct: 494 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Query: 61 EMGNMKSLTSADF 73
M +A+F
Sbjct: 554 AMFKQSGKIAANF 566
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 1 MSRNNFSGIIPVEIGHCL----LLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNA 56
+S NNFSG P+ C L L L N +G IP ++ L L++S+N L+
Sbjct: 372 LSSNNFSG--PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 429
Query: 57 SLPKEMGNMKSLTSADFSHNNFSGEIPEFGQY 88
++P +G++ L N GEIP+ Y
Sbjct: 430 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 1 MSRNNFSGIIPVEIGH--CLLLTYLDLSQNHLSGPIPVQITQ--IHILNYLNVSWNQLNA 56
+S N FSG +P + + LLT LDLS N+ SGPI + Q + L L + N
Sbjct: 347 LSFNEFSGELPESLTNLSASLLT-LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 405
Query: 57 SLPKEMGNMKSLTSADFSHNNFSGEIP 83
+P + N L S S N SG IP
Sbjct: 406 KIPPTLSNCSELVSLHLSFNYLSGTIP 432
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 20 LTYLDLSQNHLSGPIP--VQITQIHILNYLNVSWNQLNASLP-KEMGNMK--SLTSADFS 74
LT LDLS+N LSGP+ + L +LNVS N L+ P K G +K SL D S
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLS 156
Query: 75 HNNFSG 80
N+ SG
Sbjct: 157 ANSISG 162
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 28/127 (22%)
Query: 1 MSRNNFSGIIPV--EIGHCLLLTYLDLSQNHLSGPIPVQI-TQIHILNYLNVSWNQLNAS 57
+SRN+ SG + +G C L +L++S N L P V +++ L L++S N ++ +
Sbjct: 104 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 163
Query: 58 ------LPKEMGNMKSLTSA-------------------DFSHNNFSGEIPEFGQYSFFN 92
L G +K L + D S NNFS IP G S
Sbjct: 164 NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQ 223
Query: 93 STSFTGN 99
+GN
Sbjct: 224 HLDISGN 230
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
MS N SG IP EIG L L+L N +SG IP ++ + LN L++S N+L+ +P+
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 698
Query: 61 EMGNMKSLTSADFSHNNFSGEIPEFGQYSFFNSTSFTGNPHLCGSYLNPCNYS 113
M + LT D S+NN SG IPE GQ+ F F NP LCG L C+ S
Sbjct: 699 AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 4 NNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG 63
N+ +G IP + +C L ++ LS N L+G IP I ++ L L +S N + ++P E+G
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 535
Query: 64 NMKSLTSADFSHNNFSGEIP 83
+ +SL D + N F+G IP
Sbjct: 536 DCRSLIWLDLNTNLFNGTIP 555
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+S NNFS IP +G C L +LD+S N LSG I+ L LN+S NQ +P
Sbjct: 207 VSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP 265
Query: 61 EMGNMKSLTSADFSHNNFSGEIPEF 85
+KSL + N F+GEIP+F
Sbjct: 266 L--PLKSLQYLSLAENKFTGEIPDF 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+ N F+G IP + +C L L LS N+LSG IP + + L L + N L +P+
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 61 EMGNMKSLTSADFSHNNFSGEIP 83
E+ +K+L + N+ +GEIP
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIP 483
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 4 NNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG 63
N G IP E+ + L L L N L+G IP ++ LN++++S N+L +PK +G
Sbjct: 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 64 NMKSLTSADFSHNNFSGEIP-EFGQ 87
+++L S+N+FSG IP E G
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGD 536
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1 MSRNNFSGIIPVEI-GHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLP 59
++ N F+G IP + G C LT LDLS NH G +P +L L +S N + LP
Sbjct: 276 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335
Query: 60 KE-MGNMKSLTSADFSHNNFSGEIPE 84
+ + M+ L D S N FSGE+PE
Sbjct: 336 MDTLLKMRGLKVLDLSFNEFSGELPE 361
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+S N SG IP +G L L L N L G IP ++ + L L + +N L +P
Sbjct: 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 484
Query: 61 EMGNMKSLTSADFSHNNFSGEIPEF 85
+ N +L S+N +GEIP++
Sbjct: 485 GLSNCTNLNWISLSNNRLTGEIPKW 509
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+S N +G IP IG L L LS N SG IP ++ L +L+++ N N ++P
Sbjct: 497 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
Query: 61 EMGNMKSLTSADF 73
M +A+F
Sbjct: 557 AMFKQSGKIAANF 569
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 1 MSRNNFSGIIPVEIGHCL----LLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNA 56
+S NNFSG P+ C L L L N +G IP ++ L L++S+N L+
Sbjct: 375 LSSNNFSG--PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 57 SLPKEMGNMKSLTSADFSHNNFSGEIPEFGQY 88
++P +G++ L N GEIP+ Y
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 1 MSRNNFSGIIPVEIGH--CLLLTYLDLSQNHLSGPIPVQITQ--IHILNYLNVSWNQLNA 56
+S N FSG +P + + LLT LDLS N+ SGPI + Q + L L + N
Sbjct: 350 LSFNEFSGELPESLTNLSASLLT-LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 408
Query: 57 SLPKEMGNMKSLTSADFSHNNFSGEIP 83
+P + N L S S N SG IP
Sbjct: 409 KIPPTLSNCSELVSLHLSFNYLSGTIP 435
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 20 LTYLDLSQNHLSGPIP--VQITQIHILNYLNVSWNQLNASLP-KEMGNMK--SLTSADFS 74
LT LDLS+N LSGP+ + L +LNVS N L+ P K G +K SL D S
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLS 159
Query: 75 HNNFSG 80
N+ SG
Sbjct: 160 ANSISG 165
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 28/127 (22%)
Query: 1 MSRNNFSGIIPV--EIGHCLLLTYLDLSQNHLSGPIPVQI-TQIHILNYLNVSWNQLNAS 57
+SRN+ SG + +G C L +L++S N L P V +++ L L++S N ++ +
Sbjct: 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166
Query: 58 ------LPKEMGNMKSLTSA-------------------DFSHNNFSGEIPEFGQYSFFN 92
L G +K L + D S NNFS IP G S
Sbjct: 167 NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQ 226
Query: 93 STSFTGN 99
+GN
Sbjct: 227 HLDISGN 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN--LLVYEYM 262
GEQVAVK L G +H L EI L + H NIV+ K C+ N L+ E++
Sbjct: 49 TGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P+GSL E L K + + + +LK A++ KG+ YL S +HRD+ + N+L+ S+
Sbjct: 108 PSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEH 163
Query: 323 EAHVADFGLAKYLQ 336
+ + DFGL K ++
Sbjct: 164 QVKIGDFGLTKAIE 177
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN--LLVYEYM 262
GEQVAVK L G +H L EI L + H NIV+ K C+ N L+ E++
Sbjct: 37 TGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P+GSL E L K + + + +LK A++ KG+ YL S +HRD+ + N+L+ S+
Sbjct: 96 PSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEH 151
Query: 323 EAHVADFGLAKYLQ 336
+ + DFGL K ++
Sbjct: 152 QVKIGDFGLTKAIE 165
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
G VAVK L+ + N E+ + ++RH NIV + +V EY+ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 266 SLGEVLH--GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
SL +LH G R L RL +A + AKG++YLH+ +P I+HR++KS N+L++ +
Sbjct: 120 SLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYT 177
Query: 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
V DFGL++ T S + AG+ ++AP
Sbjct: 178 VKVCDFGLSRLKASTFLSS--KSAAGTPEWMAP 208
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
G VAVK L+ + N E+ + ++RH NIV + +V EY+ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 266 SLGEVLH--GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
SL +LH G R L RL +A + AKG++YLH+ +P I+HRD+KS N+L++ +
Sbjct: 120 SLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYT 177
Query: 324 AHVADFGLAKYLQDTGASECMSA--VAGSYGYIAP 356
V DFGL++ AS + + AG+ ++AP
Sbjct: 178 VKVCDFGLSRL----KASXFLXSKXAAGTPEWMAP 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 33/169 (19%)
Query: 206 GEQVAVKKLLGITKGSSHD---------NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256
G++VAVK + HD + E + ++H NI+ L+ C KE NL
Sbjct: 30 GDEVAVK-------AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL-KEPNL 81
Query: 257 -LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
LV E+ G L VL GKR + ++ + A++ A+G++YLH + IIHRD+KS+N
Sbjct: 82 CLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 316 ILLNSDFE--------AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
IL+ E + DFGLA+ T MSA AG+Y ++AP
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSA-AGAYAWMAP 183
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + KIRH +V+L A S +E +V EYM GSL
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 34 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIXIVTEYMSKGSL 89
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 90 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 146
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 147 DFGLARLIED 156
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 33 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 88
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 89 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 145
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 146 DFGLARLIED 155
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 210 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 265
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 322
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 323 DFGLARLIED 332
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 35 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 90
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 91 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 147
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 148 DFGLARLIED 157
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 210 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 265
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 322
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 323 DFGLARLIED 332
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 37 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 92
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 93 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 149
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 150 DFGLARLIED 159
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 293 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 348
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 349 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 405
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 406 DFGLARLIED 415
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVCEYMSKGSL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N ++VA+K I +GS ++ E + K+ H +V+L C + LV+E+M +
Sbjct: 50 NKDKVAIKT---IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 106
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + L +RG F E L + ++ +G++YL C +IHRD+ + N L+ +
Sbjct: 107 GCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 162
Query: 325 HVADFGLAKYLQD 337
V+DFG+ +++ D
Sbjct: 163 KVSDFGMTRFVLD 175
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 210 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVGEYMSKGSL 265
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 322
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 323 DFGLARLIED 332
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+ + NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLAAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM G L
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVMEYMSKGCL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM G L
Sbjct: 44 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGCL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 41 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSL 96
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + ++ + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 153
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 154 DFGLARLIED 163
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 41 RVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSL 96
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + ++ + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 153
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 154 DFGLARLIED 163
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N ++VA+K I +G+ + E + K+ H +V+L C + LV+E+M +
Sbjct: 28 NKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 84
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + L +RG F E L + ++ +G++YL C +IHRD+ + N L+ +
Sbjct: 85 GCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 140
Query: 325 HVADFGLAKYLQD 337
V+DFG+ +++ D
Sbjct: 141 KVSDFGMTRFVLD 153
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N ++VA+K I +G+ + E + K+ H +V+L C + LV+E+M +
Sbjct: 30 NKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + L +RG F E L + ++ +G++YL C +IHRD+ + N L+ +
Sbjct: 87 GCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 142
Query: 325 HVADFGLAKYLQD 337
V+DFG+ +++ D
Sbjct: 143 KVSDFGMTRFVLD 155
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N ++VA+K I +G+ + E + K+ H +V+L C + LV+E+M +
Sbjct: 33 NKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + L +RG F E L + ++ +G++YL C +IHRD+ + N L+ +
Sbjct: 90 GCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 145
Query: 325 HVADFGLAKYLQD 337
V+DFG+ +++ D
Sbjct: 146 KVSDFGMTRFVLD 158
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K+RH +V+L A S +E +V EYM GSL
Sbjct: 211 RVAIKTL---KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 266
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G+ G +L+ + +A + A G++Y+ +HRD+++ NIL+ + VA
Sbjct: 267 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVA 323
Query: 328 DFGLAKYLQD 337
DFGL + ++D
Sbjct: 324 DFGLGRLIED 333
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 45 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 100
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 101 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 157
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 158 DFGLARLIED 167
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 48 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 103
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 104 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 160
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 161 DFGLARLIED 170
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 47 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 102
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 103 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 159
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 160 DFGLARLIED 169
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 49 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 104
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 105 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 161
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 162 DFGLARLIED 171
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 39 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 94
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 151
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 152 DFGLARLIED 161
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 39 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 94
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 151
Query: 328 DFGLAKYLQDT 338
DFGLA+ ++D
Sbjct: 152 DFGLARLIEDA 162
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 41 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 96
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 97 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 153
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 154 DFGLARLIED 163
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 45 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 100
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 101 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 157
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 158 DFGLARLIED 167
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 40 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 95
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 96 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 152
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 153 DFGLARLIED 162
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 34 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 89
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 90 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 146
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 147 DFGLARLIED 156
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 39 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 94
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 151
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 152 DFGLARLIED 161
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 44 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 99
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 100 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 156
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 157 DFGLARLIED 166
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 39 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 94
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHRD+++ NIL++ +A
Sbjct: 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIA 151
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 152 DFGLARLIED 161
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N ++VA+K I +G+ + E + K+ H +V+L C + LV E+M +
Sbjct: 31 NKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + L +RG F E L + ++ +G++YL C +IHRD+ + N L+ +
Sbjct: 88 GCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVI 143
Query: 325 HVADFGLAKYLQD 337
V+DFG+ +++ D
Sbjct: 144 KVSDFGMTRFVLD 156
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + E+ L K RH NI+ + + K+ +V ++ SL
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLY 119
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ LH + F +++ + IA + A+G+ YLH + IIHRD+KSNNI L+ + D
Sbjct: 120 KHLHVQETKFQMFQL-IDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGD 175
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S+ + GS ++AP
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAP 203
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK L +GS + AE + +++H+ +VRL A + +E ++ EYM NGSL
Sbjct: 35 KVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 90
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G L L +A + A+G++++ IHR++++ NIL++ +A
Sbjct: 91 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIA 147
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 148 DFGLARLIED 157
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 95
Query: 269 EVLHGKRGSFLKWEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
LH S K+EM+ + IA + A+G+ YLH IIHRD+KSNNI L+ D +
Sbjct: 96 HHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKI 149
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFGLA S ++GS ++AP
Sbjct: 150 GDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 42 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 100 YGSLRDYLQAHAERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N ++VA+K I +G+ + E + K+ H +V+L C + LV+E+M +
Sbjct: 30 NKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + L +RG F E L + ++ +G++YL +IHRD+ + N L+ +
Sbjct: 87 GCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVI 142
Query: 325 HVADFGLAKYLQD 337
V+DFG+ +++ D
Sbjct: 143 KVSDFGMTRFVLD 155
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 107
Query: 269 EVLHGKRGSFLKWEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
LH S K+EM+ + IA + A+G+ YLH IIHRD+KSNNI L+ D +
Sbjct: 108 HHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKI 161
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFGLA S ++GS ++AP
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGLA+ L+D
Sbjct: 190 DFGLARVLED 199
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 70 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 128 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 181
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 182 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 38 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 96 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 149
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 150 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 37 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 95 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 148
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 149 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 57 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 115 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 168
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 39 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T+ D E +G+ H NI+RL+ S + +++ EYM NG+L
Sbjct: 76 VAIKTLKAGYTEKQRVD--FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L K G F ++ + + A G+ YL + +HRD+ + NIL+NS+ V+
Sbjct: 134 DKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 39 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 42 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 100 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ E++P
Sbjct: 42 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL E L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 100 YGSLREYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 43 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 101 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 154
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 155 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 44 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 102 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 155
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 156 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 46 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 104 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 157
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 158 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 45 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 103 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 156
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 157 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 57 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 115 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 168
Query: 322 FEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ DFGL K L QD + + AP
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 39 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHRD+ + NIL+ ++
Sbjct: 97 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 322 FEAHVADFGLAKYL 335
+ DFGL K L
Sbjct: 151 NRVKIGDFGLTKVL 164
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK-ETNL-LVYEYM 262
GE VAVK L G H +G EI L + H +I++ K C ++ E +L LV EY+
Sbjct: 42 TGEMVAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P GSL + L R S ++ L A + +G++YLH S IHR++ + N+LL++D
Sbjct: 101 PLGSLRDYL--PRHSIGLAQLLL-FAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDR 154
Query: 323 EAHVADFGLAK 333
+ DFGLAK
Sbjct: 155 LVKIGDFGLAK 165
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK--ETNLLVYEYM 262
GE VAVK L G H +G EI L + H +I++ K C + + LV EY+
Sbjct: 59 TGEMVAVKALKA-DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P GSL + L R S ++ L A + +G++YLH + IHRD+ + N+LL++D
Sbjct: 118 PLGSLRDYL--PRHSIGLAQLLL-FAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDR 171
Query: 323 EAHVADFGLAK 333
+ DFGLAK
Sbjct: 172 LVKIGDFGLAK 182
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 64 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 121
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 122 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 177
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 178 DFGLSRVLED 187
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 93
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 94 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 149
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 150 FGLATVKSRWSGSHQFEQLSGSILWMAP 177
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 91
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 92 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 96
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 97 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 152
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 153 FGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 47 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 104
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 105 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 160
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 161 DFGLSRVLED 170
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 96
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 97 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 152
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 153 FGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 74 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 132 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 187
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 188 DFGLSRVLED 197
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + + + +V ++ SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLY 107
Query: 269 EVLHGKRGSFLKWEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
LH S K+EM+ + IA + A+G+ YLH IIHRD+KSNNI L+ D +
Sbjct: 108 HHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKI 161
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFGLA S ++GS ++AP
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK-ETNL-LVYEYM 262
GE VAVK L G H +G EI L + H +I++ K C ++ E +L LV EY+
Sbjct: 42 TGEMVAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P GSL + L R S ++ L A + +G++YLH + IHR++ + N+LL++D
Sbjct: 101 PLGSLRDYL--PRHSIGLAQLLL-FAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDR 154
Query: 323 EAHVADFGLAK 333
+ DFGLAK
Sbjct: 155 LVKIGDFGLAK 165
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 91
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 92 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 148 FGLATEKSRWSGSHQFEQLSGSILWMAP 175
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 118
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 119 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 174
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 175 FGLATVKSRWSGSHQFEQLSGSILWMAP 202
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V EYM NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL + L+D
Sbjct: 190 DFGLGRVLED 199
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 119
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 120 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 175
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 176 FGLATVKSRWSGSHQFEQLSGSILWMAP 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N +VAVK L G+ E + ++H +VRL A + +E ++ EYM
Sbjct: 36 NSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAK 92
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
GSL + L G + + + + A+G++Y+ IHRD+++ N+L++
Sbjct: 93 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMC 149
Query: 325 HVADFGLAKYLQD 337
+ADFGLA+ ++D
Sbjct: 150 KIADFGLARVIED 162
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K L G LS E +G+ H NI+RL+ +N +++ E+M NG+L
Sbjct: 45 VAIKTLKGGYTERQRREFLS-EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALD 103
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L G F ++ + + A G+ YL +HRD+ + NIL+NS+ V+D
Sbjct: 104 SFLRLNDGQFTVIQL-VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSD 159
Query: 329 FGLAKYLQDTGASECMSAVAG 349
FGL+++L++ + ++ G
Sbjct: 160 FGLSRFLEENSSDPTYTSSLG 180
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 111
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 112 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 167
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 168 FGLATEKSRWSGSHQFEQLSGSILWMAP 195
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VA+K L G+ E + + K++H +V+L A S +E +V EYM GSL
Sbjct: 35 KVAIKTL---KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS-EEPIYIVTEYMNKGSL 90
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L G LK + +A + A G++Y+ IHRD++S NIL+ + +A
Sbjct: 91 LDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIA 147
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 148 DFGLARLIED 157
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + S K +V ++ SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLY 119
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 120 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 175
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 176 FGLATEKSRWSGSHQFEQLSGSILWMAP 203
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K L G LS E +G+ H NI+RL+ +N +++ E+M NG+L
Sbjct: 47 VAIKTLKGGYTERQRREFLS-EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALD 105
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L G F ++ + + A G+ YL +HRD+ + NIL+NS+ V+D
Sbjct: 106 SFLRLNDGQFTVIQL-VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSD 161
Query: 329 FGLAKYLQD 337
FGL+++L++
Sbjct: 162 FGLSRFLEE 170
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNL-LVYEYMP 263
GE VAVKKL T+ H EI L ++H NIV+ K C S NL L+ EY+P
Sbjct: 40 GEVVAVKKLQHSTE--EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 264 NGSLGEVL--HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
GSL + L H +R +K L+ + KG+ YL + IHR++ + NIL+ ++
Sbjct: 98 YGSLRDYLQKHKERIDHIKL---LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENE 151
Query: 322 FEAHVADFGLAKYL 335
+ DFGL K L
Sbjct: 152 NRVKIGDFGLTKVL 165
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L E+ L K RH NI+ + + + + V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLY 91
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
LH F ++ + IA + A+G+ YLH IIHRD+KSNNI L+ D + D
Sbjct: 92 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGD 147
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA S ++GS ++AP
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N +VAVK L G+ E + ++H +VRL A + +E ++ E+M
Sbjct: 35 NSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAK 91
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
GSL + L G + + + + A+G++Y+ IHRD+++ N+L++
Sbjct: 92 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMC 148
Query: 325 HVADFGLAKYLQD 337
+ADFGLA+ ++D
Sbjct: 149 KIADFGLARVIED 161
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMP 263
G +VAVK + K + AE + ++RH N+V+L ++ L +V EYM
Sbjct: 215 RGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL + L + S L + LK +++ + + YL + +HRD+ + N+L++ D
Sbjct: 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNV 327
Query: 324 AHVADFGLAKY---LQDTG 339
A V+DFGL K QDTG
Sbjct: 328 AKVSDFGLTKEASSTQDTG 346
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 209 VAVKKLL-GITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T+ D +E +G+ H N++ L+ + +++ E+M NGSL
Sbjct: 64 VAIKTLKSGYTEKQRRD--FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + A G+ YL D + +HRD+ + NIL+NS+ V+
Sbjct: 122 DSFLRQNDGQFTVIQL-VGMLRGIAAGMKYLA-DMN--YVHRDLAARNILVNSNLVCKVS 177
Query: 328 DFGLAKYLQDTGASECMSAVAG 349
DFGL+++L+D + ++ G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALG 199
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 19/158 (12%)
Query: 209 VAVKKL-LGITKGSSHD----NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
VA+K L LG ++G + E+ + + H NIV+L N +V E++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
G L L K +KW ++L++ ++ A G+ Y+ + +P I+HRD++S NI L S E
Sbjct: 105 CGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDE 162
Query: 324 -----AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
A VADFGL++ + +S + G++ ++AP
Sbjct: 163 NAPVCAKVADFGLSQQ-----SVHSVSGLLGNFQWMAP 195
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMP 263
G +VAVK K + AE + ++RH N+V+L ++ L +V EYM
Sbjct: 34 RGNKVAVK----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 89
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL + L + S L + LK +++ + + YL + +HRD+ + N+L++ D
Sbjct: 90 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNV 146
Query: 324 AHVADFGLAKY---LQDTG 339
A V+DFGL K QDTG
Sbjct: 147 AKVSDFGLTKEASSTQDTG 165
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V E M NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL + +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMP 263
G +VAVK K + AE + ++RH N+V+L ++ L +V EYM
Sbjct: 28 RGNKVAVK----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL + L + S L + LK +++ + + YL + +HRD+ + N+L++ D
Sbjct: 84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNV 140
Query: 324 AHVADFGLAKY---LQDTG 339
A V+DFGL K QDTG
Sbjct: 141 AKVSDFGLTKEASSTQDTG 159
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMP 263
G +VAVK K + AE + ++RH N+V+L ++ L +V EYM
Sbjct: 43 RGNKVAVK----CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL + L + S L + LK +++ + + YL + +HRD+ + N+L++ D
Sbjct: 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNV 155
Query: 324 AHVADFGLAKY---LQDTG 339
A V+DFGL K QDTG
Sbjct: 156 AKVSDFGLTKEASSTQDTG 174
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T+ D +E +G+ H NI+RL+ + ++V EYM NGSL
Sbjct: 80 VAIKALKAGYTERQRRD--FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + G+ YL D +HRD+ + N+L++S+ V+
Sbjct: 138 DTFLRTHDGQFTIMQL-VGMLRGVGAGMRYL-SDLG--YVHRDLAARNVLVDSNLVCKVS 193
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 194 DFGLSRVLED 203
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T+ D +E +G+ H NI+RL+ + ++V EYM NGSL
Sbjct: 80 VAIKALKAGYTERQRRD--FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + G+ YL D +HRD+ + N+L++S+ V+
Sbjct: 138 DTFLRTHDGQFTIMQL-VGMLRGVGAGMRYL-SDLG--YVHRDLAARNVLVDSNLVCKVS 193
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 194 DFGLSRVLED 203
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+ L+ + + ++V EYM NGSL
Sbjct: 53 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL 110
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + + G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 111 DTFLKKNDGQFTVIQL-VGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 166
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 167 DFGLSRVLED 176
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSA-EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
T +G Q +K++ I++ SS + S E+ L ++H NIV+ + + +V +Y
Sbjct: 46 TEDGRQYVIKEI-NISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
G L + ++ ++G + + L ++ L ++H I+HRD+KS NI L D
Sbjct: 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKD 161
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG+A+ L T E A G+ Y++P
Sbjct: 162 GTVQLGDFGIARVLNST--VELARACIGTPYYLSP 194
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 230 EIRTLGKIRHRNIVRLKAF---CSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRL 285
EI + ++H N+++ A SN E L L+ + GSL + L +G+ + W
Sbjct: 59 EIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELC 115
Query: 286 KIAIEAAKGLSYLHHDC--------SPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337
+A ++GLSYLH D P I HRD KS N+LL SD A +ADFGLA +
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Query: 338 TGASECMSAVAGSYGYIAP 356
G+ Y+AP
Sbjct: 176 GKPPGDTHGQVGTRRYMAP 194
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHD--NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
G +VAVK +L K S D + EI+ L RH +I++L S +V EY+
Sbjct: 40 TGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
G L + + K G + E R ++ + G+ Y H +++HRD+K N+LL++
Sbjct: 99 SGGELFDYI-CKNGRLDEKESR-RLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHM 153
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
A +ADFGL+ + D E + GS Y AP
Sbjct: 154 NAKIADFGLSNMMSD---GEFLRXSCGSPNYAAP 184
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V E M NGSL
Sbjct: 47 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 104
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 105 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 160
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 161 DFGLSRVLED 170
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D E +G+ H NI+RL+ + + ++V E M NGSL
Sbjct: 76 VAIKTLKVGYTEKQRRD--FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 134 DSFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVS 189
Query: 328 DFGLAKYLQD 337
DFGL++ L+D
Sbjct: 190 DFGLSRVLED 199
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSA---EIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
P GE + + + + + S A + +G + H +IVRL C L V +
Sbjct: 36 PEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQ 94
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
Y+P GSL + + RG+ L ++ L ++ AKG+ YL ++HR++ + N+LL S
Sbjct: 95 YLPLGSLLDHVRQHRGA-LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKS 150
Query: 321 DFEAHVADFGLAKYL 335
+ VADFG+A L
Sbjct: 151 PSQVQVADFGVADLL 165
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 204 PNGEQVAVK---KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
P GE + + K++ G ++ + +G + H +IVRL C L V +
Sbjct: 54 PEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQ 112
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
Y+P GSL + + RG+ L ++ L ++ AKG+ YL ++HR++ + N+LL S
Sbjct: 113 YLPLGSLLDHVRQHRGA-LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKS 168
Query: 321 DFEAHVADFGLAKYL 335
+ VADFG+A L
Sbjct: 169 PSQVQVADFGVADLL 183
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++VAVK + SS L E+R + + H NIV+L ++T LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 98 GEVFDYLVA-HGRMKEKEARAKFR-QIVSAVQYCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + A G+ Y AP L
Sbjct: 153 KIADFGFS---NEFTFGNKLDAFCGAPPYAAPEL 183
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK I +GS ++ E +T+ K+ H +V+ CS + +V EY+ NG L
Sbjct: 35 VAVKM---IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L G L+ L++ + +G+++L S IHRD+ + N L++ D V+D
Sbjct: 92 NYLRS-HGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSD 147
Query: 329 FGLAKYLQD 337
FG+ +Y+ D
Sbjct: 148 FGMTRYVLD 156
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL----KAFCSNKETNLLVYEYM 262
E VAVK + I S N E+ +L ++H NI++ K S L+ +
Sbjct: 48 EYVAVK-IFPIQDKQSWQN--EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFH 104
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-------SPLIIHRDVKSNN 315
GSL + L + + + W IA A+GL+YLH D P I HRD+KS N
Sbjct: 105 EKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKN 161
Query: 316 ILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+LL ++ A +ADFGLA + ++ G+ Y+AP
Sbjct: 162 VLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 19/158 (12%)
Query: 209 VAVKKL-LGITKGSSHD----NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
VA+K L LG ++G + E+ + + H NIV+L N +V E++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
G L L K +KW ++L++ ++ A G+ Y+ + +P I+HRD++S NI L S E
Sbjct: 105 CGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDE 162
Query: 324 -----AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
A VADFG ++ + +S + G++ ++AP
Sbjct: 163 NAPVCAKVADFGTSQQ-----SVHSVSGLLGNFQWMAP 195
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+ VA+K++ + S E+R L ++ H NIV+L C N LV EY
Sbjct: 31 RAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEG 84
Query: 265 GSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL VLHG + + ++ ++G++YLH +IHRD+K N+LL +
Sbjct: 85 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 144
Query: 324 A-HVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG A +Q M+ GS ++AP
Sbjct: 145 VLKICDFGTACDIQTH-----MTNNKGSAAWMAP 173
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++VAVK + SS L E+R + + H NIV+L ++T LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 98 GEVFDYLVA-HGRMKEKEARAKFR-QIVSAVQYCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + GS Y AP L
Sbjct: 153 KIADFGFS---NEFTFGNKLDTFCGSPPYAAPEL 183
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++VAVK + SS L E+R + + H NIV+L ++T LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 98 GEVFDYLVA-HGRMKEKEARAKFR-QIVSAVQYCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + GS Y AP L
Sbjct: 153 KIADFGFS---NEFTFGNKLDTFCGSPPYAAPEL 183
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+ VA+K++ + S E+R L ++ H NIV+L C N LV EY
Sbjct: 30 RAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC--LVMEYAEG 83
Query: 265 GSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL VLHG + + ++ ++G++YLH +IHRD+K N+LL +
Sbjct: 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 143
Query: 324 A-HVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG A +Q M+ GS ++AP
Sbjct: 144 VLKICDFGTACDIQTH-----MTNNKGSAAWMAP 172
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 19/158 (12%)
Query: 209 VAVKKL-LGITKGSSHD----NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
VA+K L LG ++G + E+ + + H NIV+L N +V E++P
Sbjct: 47 VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
G L L K +KW ++L++ ++ A G+ Y+ + +P I+HRD++S NI L S E
Sbjct: 105 CGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDE 162
Query: 324 -----AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
A VADF L++ + +S + G++ ++AP
Sbjct: 163 NAPVCAKVADFSLSQQ-----SVHSVSGLLGNFQWMAP 195
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K I +GS ++ E + + + H +V+L C+ + ++ EYM NG L
Sbjct: 31 VAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 87
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L R F ++ L++ + + + YL S +HRD+ + N L+N V+D
Sbjct: 88 NYLREMRHRFQTQQL-LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 143
Query: 329 FGLAKYLQD 337
FGL++Y+ D
Sbjct: 144 FGLSRYVLD 152
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K I +GS ++ E + + + H +V+L C+ + ++ EYM NG L
Sbjct: 35 VAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 91
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L R F ++ L++ + + + YL S +HRD+ + N L+N V+D
Sbjct: 92 NYLREMRHRFQTQQL-LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 147
Query: 329 FGLAKYLQD 337
FGL++Y+ D
Sbjct: 148 FGLSRYVLD 156
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K I +GS ++ E + + + H +V+L C+ + ++ EYM NG L
Sbjct: 36 VAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L R F ++ L++ + + + YL S +HRD+ + N L+N V+D
Sbjct: 93 NYLREMRHRFQTQQL-LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 148
Query: 329 FGLAKYLQD 337
FGL++Y+ D
Sbjct: 149 FGLSRYVLD 157
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K I +GS ++ E + + + H +V+L C+ + ++ EYM NG L
Sbjct: 51 VAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L R F ++ L++ + + + YL S +HRD+ + N L+N V+D
Sbjct: 108 NYLREMRHRFQTQQL-LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 163
Query: 329 FGLAKYLQD 337
FGL++Y+ D
Sbjct: 164 FGLSRYVLD 172
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K I +GS ++ E + + + H +V+L C+ + ++ EYM NG L
Sbjct: 36 VAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L R F ++ L++ + + + YL S +HRD+ + N L+N V+D
Sbjct: 93 NYLREMRHRFQTQQL-LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 148
Query: 329 FGLAKYLQD 337
FGL++Y+ D
Sbjct: 149 FGLSRYVLD 157
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K I +GS ++ E + + + H +V+L C+ + ++ EYM NG L
Sbjct: 51 VAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L R F ++ L++ + + + YL S +HRD+ + N L+N V+D
Sbjct: 108 NYLREMRHRFQTQQL-LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 163
Query: 329 FGLAKYLQD 337
FGL++Y+ D
Sbjct: 164 FGLSRYVLD 172
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHD--NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
G +VAVK +L K S D + EI+ L RH +I++L S +V EY+
Sbjct: 35 TGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
G L + + K G + E R ++ + + Y H +++HRD+K N+LL++
Sbjct: 94 SGGELFDYI-CKHGRVEEMEAR-RLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHM 148
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
A +ADFGL+ + D E + GS Y AP
Sbjct: 149 NAKIADFGLSNMMSD---GEFLRTSCGSPNYAAP 179
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K I +GS ++ E + + + H +V+L C+ + ++ EYM NG L
Sbjct: 42 VAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 98
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L R F ++ L++ + + + YL S +HRD+ + N L+N V+D
Sbjct: 99 NYLREMRHRFQTQQL-LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSD 154
Query: 329 FGLAKYLQD 337
FGL++Y+ D
Sbjct: 155 FGLSRYVLD 163
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T D +E +G+ H NI+ L+ + + +++ EYM NGSL
Sbjct: 60 VAIKTLKAGYTDKQRRD--FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 117
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + G+ YL + +HRD+ + NIL+NS+ V+
Sbjct: 118 DAFLRKNDGRFTVIQL-VGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVS 173
Query: 328 DFGLAKYLQD 337
DFG+++ L+D
Sbjct: 174 DFGMSRVLED 183
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L +G T+ D A I +G+ H N+V L+ + + ++V E+M NG+L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASI--MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + A G+ YL +HRD+ + NIL+NS+ V+
Sbjct: 132 DAFLRKHDGQFTVIQL-VGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 328 DFGLAKYLQD 337
DFGL++ ++D
Sbjct: 188 DFGLSRVIED 197
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK + GS AE + ++H +V+L A + KE ++ E+M GSL
Sbjct: 41 KVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 96
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L GS + + + A+G++++ IHRD+++ NIL+++ +A
Sbjct: 97 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIA 153
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 154 DFGLARVIED 163
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++VAV+ + SS L E+R + + H NIV+L ++T LV EY
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 98 GEVFDYLVA-HGRMKEKEARAKFR-QIVSAVQYCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + GS Y AP L
Sbjct: 153 KIADFGFS---NEFTFGNKLDTFCGSPPYAAPEL 183
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T D +E +G+ H NI+ L+ + + +++ EYM NGSL
Sbjct: 39 VAIKTLKAGYTDKQRRD--FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 96
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + G+ YL D S +HRD+ + NIL+NS+ V+
Sbjct: 97 DAFLRKNDGRFTVIQL-VGMLRGIGSGMKYLS-DMS--YVHRDLAARNILVNSNLVCKVS 152
Query: 328 DFGLAKYLQD 337
DFG+++ L+D
Sbjct: 153 DFGMSRVLED 162
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 36 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 94
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 95 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 150
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D A+E G+ Y++P
Sbjct: 151 DFGVSGQLIDEMANE----FVGTRSYMSP 175
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK + GS AE + ++H +V+L A + KE ++ E+M GSL
Sbjct: 214 KVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 269
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L GS + + + A+G++++ IHRD+++ NIL+++ +A
Sbjct: 270 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIA 326
Query: 328 DFGLAKYLQD 337
DFGLA+ ++D
Sbjct: 327 DFGLARVIED 336
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T D +E +G+ H NI+ L+ + + +++ EYM NGSL
Sbjct: 45 VAIKTLKAGYTDKQRRD--FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 102
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + G+ YL D S +HRD+ + NIL+NS+ V+
Sbjct: 103 DAFLRKNDGRFTVIQL-VGMLRGIGSGMKYLS-DMS--YVHRDLAARNILVNSNLVCKVS 158
Query: 328 DFGLAKYLQD 337
DFG+++ L+D
Sbjct: 159 DFGMSRVLED 168
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++VAVK + SS L E+R + + H NIV+L ++T LV EY
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 91 GEVFDYLVA-HGWMKEKEARAKFR-QIVSAVQYCHQK---FIVHRDLKAENLLLDADMNI 145
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + GS Y AP L
Sbjct: 146 KIADFGFS---NEFTFGNKLDTFCGSPPYAAPEL 176
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++VAV+ + SS L E+R + + H NIV+L ++T LV EY
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 98 GEVFDYLVA-HGRMKEKEARAKFR-QIVSAVQYCHQK---FIVHRDLKAENLLLDADMNI 152
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + GS Y AP L
Sbjct: 153 KIADFGFS---NEFTFGNKLDEFCGSPPYAAPEL 183
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 209 VAVKKLL-GITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G T+ D +E +G+ H N++ L+ + +++ E+M NGSL
Sbjct: 38 VAIKTLKSGYTEKQRRD--FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 95
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
L G F ++ + + A G+ YL D + +HR + + NIL+NS+ V+
Sbjct: 96 DSFLRQNDGQFTVIQL-VGMLRGIAAGMKYLA-DMN--YVHRALAARNILVNSNLVCKVS 151
Query: 328 DFGLAKYLQDTGASECMSAVAG 349
DFGL+++L+D + ++ G
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALG 173
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHD--NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
G +VAVK +L K S D + EI+ L RH +I++L S +V EY+
Sbjct: 35 TGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
G L + + K G + E R ++ + + Y H +++HRD+K N+LL++
Sbjct: 94 SGGELFDYI-CKHGRVEEMEAR-RLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHM 148
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
A +ADFGL+ + D E + GS Y AP
Sbjct: 149 NAKIADFGLSNMMSD---GEFLRDSCGSPNYAAP 179
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + H+++V F + + +V E SL E LH +R + + E R
Sbjct: 86 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 144
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + G YLH + +IHRD+K N+ LN D E + DFGLA ++ G E
Sbjct: 145 LR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKV 198
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 199 LCGTPNYIAP 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
+ +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 43 IMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 101
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K + E+ K++I +GL+YL I+HRDVK +NIL+NS E +
Sbjct: 102 DQVL--KEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLC 157
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y+AP
Sbjct: 158 DFGVSGQLIDSMA----NSFVGTRSYMAP 182
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + H+++V F + + +V E SL E LH +R + + E R
Sbjct: 68 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 126
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + G YLH + +IHRD+K N+ LN D E + DFGLA ++ G E
Sbjct: 127 LR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKT 180
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 181 LCGTPNYIAP 190
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + H+++V F + + +V E SL E LH +R + + E R
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 122
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + G YLH + +IHRD+K N+ LN D E + DFGLA ++ G E
Sbjct: 123 LR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKT 176
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 177 LCGTPNYIAP 186
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + H+++V F + + +V E SL E LH +R + + E R
Sbjct: 88 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 146
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + G YLH + +IHRD+K N+ LN D E + DFGLA ++ G E
Sbjct: 147 LR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKV 200
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 201 LCGTPNYIAP 210
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + H+++V F + + +V E SL E LH +R + + E R
Sbjct: 64 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 122
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + G YLH + +IHRD+K N+ LN D E + DFGLA ++ G E
Sbjct: 123 LR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKT 176
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 177 LCGTPNYIAP 186
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + H+++V F + + +V E SL E LH +R + + E R
Sbjct: 62 MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY 120
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + G YLH + +IHRD+K N+ LN D E + DFGLA ++ G E
Sbjct: 121 LR-QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKV 174
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 175 LCGTPNYIAP 184
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 91
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 92 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 147
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSP 172
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 95 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 153
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 154 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 209
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 210 DFGVSGQLIDSMA----NSFVGTRSYMSP 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 91
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 92 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 147
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSP 172
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR-LKAFCSNKETNLLVYEYMP 263
N ++A+K++ + S + L EI ++H+NIV+ L +F N + + E +P
Sbjct: 46 NQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVP 102
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKI-AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-D 321
GSL +L K G E + + +GL YLH + I+HRD+K +N+L+N+
Sbjct: 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYS 159
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
++DFG +K L G + C G+ Y+AP
Sbjct: 160 GVLKISDFGTSKRL--AGINPCTETFTGTLQYMAP 192
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR-LKAFCSNKETNLLVYEYMP 263
N ++A+K++ + S + L EI ++H+NIV+ L +F N + + E +P
Sbjct: 32 NQVRIAIKEIP--ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM-EQVP 88
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-D 321
GSL +L K G E + + +GL YLH + I+HRD+K +N+L+N+
Sbjct: 89 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYS 145
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
++DFG +K L G + C G+ Y+AP
Sbjct: 146 GVLKISDFGTSKRL--AGINPCTETFTGTLQYMAP 178
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 91
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 92 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 147
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSP 172
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 91
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 92 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 147
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 91
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 92 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 147
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 148 DFGVSGQLIDSMA----NSFVGTRSYMSP 172
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 203 TPNGEQVAVK---KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE V + K+L T G + E + + H ++VRL C + T LV
Sbjct: 37 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT 95
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
+ MP+G L E +H + + + ++ L ++ AKG+ YL ++HRD+ + N+L+
Sbjct: 96 QLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVK 151
Query: 320 SDFEAHVADFGLAKYLQ 336
S + DFGLA+ L+
Sbjct: 152 SPNHVKITDFGLARLLE 168
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++VAVK + SS L E+R + H NIV+L ++T LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 265 GSLGE--VLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
G + + V HG+ + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 98 GEVFDYLVAHGRXK---EKEARAKFR-QIVSAVQYCHQK---FIVHRDLKAENLLLDADX 150
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + A G+ Y AP L
Sbjct: 151 NIKIADFGFS---NEFTFGNKLDAFCGAPPYAAPEL 183
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 203 TPNGEQVAVK---KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE V + K+L T G + E + + H ++VRL C + T LV
Sbjct: 60 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT 118
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
+ MP+G L E +H + + + ++ L ++ AKG+ YL ++HRD+ + N+L+
Sbjct: 119 QLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVK 174
Query: 320 SDFEAHVADFGLAKYLQ 336
S + DFGLA+ L+
Sbjct: 175 SPNHVKITDFGLARLLE 191
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 60 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 118
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 119 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 174
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 175 DFGVSGQLIDSMA----NSFVGTRSYMSP 199
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK--ETNLLVYEYM 262
GE VAVK L G +G EI L + H +IV+ K C ++ ++ LV EY+
Sbjct: 36 TGEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P GSL + L + L A + +G++YLH + IHR + + N+LL++D
Sbjct: 95 PLGSLRDYLPRHCVGLAQL---LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDR 148
Query: 323 EAHVADFGLAK 333
+ DFGLAK
Sbjct: 149 LVKIGDFGLAK 159
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK--ETNLLVYEYM 262
GE VAVK L G +G EI L + H +IV+ K C ++ ++ LV EY+
Sbjct: 37 TGEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P GSL + L + L A + +G++YLH + IHR + + N+LL++D
Sbjct: 96 PLGSLRDYLPRHCVGLAQL---LLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDR 149
Query: 323 EAHVADFGLAK 333
+ DFGLAK
Sbjct: 150 LVKIGDFGLAK 160
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G VA+KK L EI+ L ++RH N+V L C K+ LV+E++ +
Sbjct: 49 TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH 108
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L ++ G L +++ K + G+ + H S IIHRD+K NIL++
Sbjct: 109 TILDDLELFPNG--LDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVV 163
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ DFG A+ L G E + Y AP L
Sbjct: 164 KLCDFGFARTLAAPG--EVYDDEVATRWYRAPEL 195
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
P E+VA+K++ + K + + L EI+ + + H NIV K+ LV + +
Sbjct: 32 APKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLL 90
Query: 263 PNGSLGEVLH------GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
GS+ +++ + L I E +GL YLH + IHRDVK+ NI
Sbjct: 91 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNI 147
Query: 317 LLNSDFEAHVADFGLAKYLQ---DTGASECMSAVAGSYGYIAP 356
LL D +ADFG++ +L D ++ G+ ++AP
Sbjct: 148 LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
P E+VA+K++ + K + + L EI+ + + H NIV K+ LV + +
Sbjct: 37 APKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLL 95
Query: 263 PNGSLGEVLH------GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
GS+ +++ + L I E +GL YLH + IHRDVK+ NI
Sbjct: 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNI 152
Query: 317 LLNSDFEAHVADFGLAKYLQ---DTGASECMSAVAGSYGYIAP 356
LL D +ADFG++ +L D ++ G+ ++AP
Sbjct: 153 LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMPNGSL 267
V +KL+ + + N + E++ L + IV AF S+ E ++ + E+M GSL
Sbjct: 52 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSL 110
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+VL K+ + ++ K++I KGL+YL I+HRDVK +NIL+NS E +
Sbjct: 111 DQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLC 166
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG++ L D+ A ++ G+ Y++P
Sbjct: 167 DFGVSGQLIDSMA----NSFVGTRSYMSP 191
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G+ VA+KK L EIR L +++H N+V L K LV+EY +
Sbjct: 27 TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNSDFE 323
L E+ +RG + + I + + +++ H H+C IHRDVK NIL+
Sbjct: 87 TVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCHKHNC----IHRDVKPENILITKHSV 140
Query: 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ DFG A+ L TG S+ + Y +P L
Sbjct: 141 IKLCDFGFARLL--TGPSDYYDDEVATRWYRSPEL 173
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 111
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 112 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 164
Query: 343 CMSAVAGSYGYIAPVL 358
+A+ G+ Y+ P +
Sbjct: 165 RRAALCGTLDYLPPEM 180
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 109 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 161
Query: 343 CMSAVAGSYGYIAP 356
+A+ G+ Y+ P
Sbjct: 162 RRAALCGTLDYLPP 175
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLK--AFCSNKETNLLVYEYM 262
G VAVK+L G EI+ L + IV+ + ++ +++ LV EY+
Sbjct: 39 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P+G L + L R L L + + KG+ YL S +HRD+ + NIL+ S+
Sbjct: 97 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEA 152
Query: 323 EAHVADFGLAKYL 335
+ADFGLAK L
Sbjct: 153 HVKIADFGLAKLL 165
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G +VAVK + + L E+R + + H NIV+L ++T LV EY
Sbjct: 39 TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASG 98
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL+ D
Sbjct: 99 GEVFDYLVA-HGRMKEKEARAKFR-QIVSAVQYCHQK---YIVHRDLKAENLLLDGDMNI 153
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + + + GS Y AP L
Sbjct: 154 KIADFGFS---NEFTVGNKLDTFCGSPPYAAPEL 184
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G + + L K F E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSKFD--EQ 113
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 114 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 166
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 167 RRTTLCGTLDYLPPEM 182
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G +VA+K + + L E+R + + H NIV+L ++T L+ EY
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 99 GEVFDYLVA-HGRMKEKEARSKFR-QIVSAVQYCHQK---RIVHRDLKAENLLLDADMNI 153
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + G + A G+ Y AP L
Sbjct: 154 KIADFGFSNEFTVGGK---LDAFCGAPPYAAPEL 184
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 109 RTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 161
Query: 343 CMSAVAGSYGYIAP 356
+A+ G+ Y+ P
Sbjct: 162 RRAALCGTLDYLPP 175
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLK--AFCSNKETNLLVYEYM 262
G VAVK+L G EI+ L + IV+ + ++ +++ LV EY+
Sbjct: 51 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P+G L + L R L L + + KG+ YL S +HRD+ + NIL+ S+
Sbjct: 109 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEA 164
Query: 323 EAHVADFGLAKYL 335
+ADFGLAK L
Sbjct: 165 HVKIADFGLAKLL 177
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLK--AFCSNKETNLLVYEYM 262
G VAVK+L G EI+ L + IV+ + ++ +++ LV EY+
Sbjct: 38 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P+G L + L R L L + + KG+ YL S +HRD+ + NIL+ S+
Sbjct: 96 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEA 151
Query: 323 EAHVADFGLAKYL 335
+ADFGLAK L
Sbjct: 152 HVKIADFGLAKLL 164
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 205 NGEQVAVKKLLGI-TKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
G++ AVK + K + L E++ L ++ H NI++L F +K LV E
Sbjct: 56 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 115
Query: 264 NGSL-GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-- 320
G L E++ KR S + +I + G++Y+H + I+HRD+K N+LL S
Sbjct: 116 GGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKS 169
Query: 321 -DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
D + DFGL+ + + AS+ M G+ YIAP
Sbjct: 170 KDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAP 203
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 205 NGEQVAVKKLLG-ITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
G++ AVK + K + L E++ L ++ H NI++L F +K LV E
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109
Query: 264 NGSL-GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-- 320
G L E++ KR S + +I + G++Y+H + I+HRD+K N+LL S
Sbjct: 110 GGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKS 163
Query: 321 -DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
D + DFGL+ + + AS+ M G+ YIAP
Sbjct: 164 KDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAP 197
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L ++ S +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQR 113
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
E A LSY H S +IHRD+K N+LL S+ E +ADFG + + S
Sbjct: 114 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVH----APSSR 166
Query: 344 MSAVAGSYGYIAP 356
+ + G+ Y+ P
Sbjct: 167 RTTLCGTLDYLPP 179
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 134
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 135 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 187
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 188 RRTTLCGTLDYLPPEM 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 125
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 126 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 178
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 179 RRTTLCGTLDYLPPEM 194
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + + +E
Sbjct: 109 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTE 165
Query: 343 CMSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 166 ----LCGTLDYLPPEM 177
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G +VA+K + + L E+R + + H NIV+L ++T L+ EY
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G + + L G + E R K + + Y H I+HRD+K+ N+LL++D
Sbjct: 96 GEVFDYLVA-HGRMKEKEARSKFR-QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNI 150
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ADFG + G + GS Y AP L
Sbjct: 151 KIADFGFSNEFTVGGK---LDTFCGSPPYAAPEL 181
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+VAVK + GS AE + ++H +V+L A + KE ++ E+M GSL
Sbjct: 208 KVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 263
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L GS + + + A+G++++ IHRD+++ NIL+++ +A
Sbjct: 264 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIA 320
Query: 328 DFGLAK 333
DFGLA+
Sbjct: 321 DFGLAR 326
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 109 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 161
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 162 RRTTLCGTLDYLPPEM 177
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 113
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 114 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 166
Query: 343 CMSAVAGSYGYIAP 356
+ + G+ Y+ P
Sbjct: 167 RRTTLCGTLDYLPP 180
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 109
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 110 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCH----APSS 162
Query: 343 CMSAVAGSYGYIAPVL 358
+ ++G+ Y+ P +
Sbjct: 163 RRTTLSGTLDYLPPEM 178
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 111
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 112 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 164
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 165 RRTTLCGTLDYLPPEM 180
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G + + L K F E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-KLSKFD--EQ 113
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 114 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 166
Query: 343 CMSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 167 RRXXLXGTLDYLPPEM 182
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L ++ S +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQR 113
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
E A LSY H S +IHRD+K N+LL S+ E +ADFG + + S
Sbjct: 114 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVH----APSSR 166
Query: 344 MSAVAGSYGYIAP 356
+ G+ Y+ P
Sbjct: 167 RDTLCGTLDYLPP 179
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 135
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +A
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA 191
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 192 FVGTAQYVSPEL 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 205 NGEQVAVKKLLG-ITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
G++ AVK + K + L E++ L ++ H NI++L F +K LV E
Sbjct: 74 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 133
Query: 264 NGSL-GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-- 320
G L E++ KR S + +I + G++Y+H + I+HRD+K N+LL S
Sbjct: 134 GGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKS 187
Query: 321 -DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
D + DFGL+ + + AS+ M G+ YIAP
Sbjct: 188 KDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAP 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 107
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 108 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 160
Query: 343 CMSAVAGSYGYIAP 356
+ + G+ Y+ P
Sbjct: 161 RRTTLCGTLDYLPP 174
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE + +K+L+ + + E++ + + H N+++ + + EY+
Sbjct: 34 TGEVMVMKELIRFDEETQRT--FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L ++ + W R+ A + A G++YLH S IIHRD+ S+N L+ +
Sbjct: 92 GTLRGIIKSMDSQY-PWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNV 147
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 148 VVADFGLARLMVD 160
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 205 NGEQVAVKKLLG-ITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
G++ AVK + K + L E++ L ++ H NI++L F +K LV E
Sbjct: 73 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 132
Query: 264 NGSL-GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-- 320
G L E++ KR S + +I + G++Y+H + I+HRD+K N+LL S
Sbjct: 133 GGELFDEIISRKRFSEVD---AARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKS 186
Query: 321 -DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
D + DFGL+ + + AS+ M G+ YIAP
Sbjct: 187 KDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAP 220
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 113
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 114 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 166
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 167 RRTTLCGTLDYLPPEM 182
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 223 HDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWE 282
D+ L EI L KI+H NIV L+ + LV + + G L + + +RG + + +
Sbjct: 49 RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKD 107
Query: 283 MRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVADFGLAKYLQDTG 339
L I + + YLH + I+HRD+K N+L + E + DFGL+K Q+
Sbjct: 108 ASLVIQ-QVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162
Query: 340 ASECMSAVAGSYGYIAP 356
MS G+ GY+AP
Sbjct: 163 ---IMSTACGTPGYVAP 176
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 105
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 106 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 158
Query: 343 CMSAVAGSYGYIAP 356
+ + G+ Y+ P
Sbjct: 159 RRTTLCGTLDYLPP 172
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 112
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 113 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 165
Query: 343 CMSAVAGSYGYIAP 356
+ + G+ Y+ P
Sbjct: 166 RRTTLCGTLDYLPP 179
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 111
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 112 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 164
Query: 343 CMSAVAGSYGYIAP 356
+ + G+ Y+ P
Sbjct: 165 RRTTLCGTLDYLPP 178
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRL-KAFCSNKETNL-----LVYE 260
Q+A K++ +T + + EI L K HRNI AF + LV E
Sbjct: 50 QLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ GS+ +++ +G+ LK E I E +GLS+LH +IHRD+K N+LL
Sbjct: 108 FCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTE 164
Query: 321 DFEAHVADFGLAKYLQDT 338
+ E + DFG++ L T
Sbjct: 165 NAEVKLVDFGVSAQLDRT 182
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 109
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 110 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 162
Query: 343 CMSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 163 RRDTLCGTLDYLPPEM 178
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 109 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 161
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 162 RRTDLCGTLDYLPPEM 177
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 109
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 110 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 162
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 163 RRTDLCGTLDYLPPEM 178
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN-----LL 257
PNGE+ G+ + + L +R L H N+VRL C+ T+ L
Sbjct: 39 VPNGEE-------GLPISTVREVAL---LRRLEAFEHPNVVRLMDVCATSRTDREIKVTL 88
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
V+E++ + L L L E + + +GL +LH +C I+HRD+K NIL
Sbjct: 89 VFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENIL 144
Query: 318 LNSDFEAHVADFGLAK 333
+ S +ADFGLA+
Sbjct: 145 VTSGGTVKLADFGLAR 160
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN-----LL 257
PNGE+ G+ + + L +R L H N+VRL C+ T+ L
Sbjct: 39 VPNGEE-------GLPISTVREVAL---LRRLEAFEHPNVVRLMDVCATSRTDREIKVTL 88
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
V+E++ + L L L E + + +GL +LH +C I+HRD+K NIL
Sbjct: 89 VFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENIL 144
Query: 318 LNSDFEAHVADFGLAK 333
+ S +ADFGLA+
Sbjct: 145 VTSGGTVKLADFGLAR 160
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN-----LL 257
PNGE+ G+ + + L +R L H N+VRL C+ T+ L
Sbjct: 39 VPNGEE-------GLPISTVREVAL---LRRLEAFEHPNVVRLMDVCATSRTDREIKVTL 88
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
V+E++ + L L L E + + +GL +LH +C I+HRD+K NIL
Sbjct: 89 VFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENIL 144
Query: 318 LNSDFEAHVADFGLAK 333
+ S +ADFGLA+
Sbjct: 145 VTSGGTVKLADFGLAR 160
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 113
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 114 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 166
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 167 RRTDLCGTLDYLPPEM 182
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 109 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 161
Query: 343 CMSAVAGSYGYIAP 356
+ + G+ Y+ P
Sbjct: 162 RRTXLCGTLDYLPP 175
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET------NLLV 258
G +VA+KKL + E+R L +RH N++ L + ET LV
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 259 YEYMPNGSLGEVL-HGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+M LG+++ H K G E R++ + + KGL Y+H + IIHRD+K N+
Sbjct: 109 MPFM-GTDLGKLMKHEKLG-----EDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNL 159
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N D E + DFGLA+ SE V + Y AP +L W
Sbjct: 160 AVNEDCELKILDFGLAR----QADSEMXGXVVTRW-YRAPEVILNW 200
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 134
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 135 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 187
Query: 343 CMSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 188 RRDDLCGTLDYLPPEM 203
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E R L + H NIVRL C+ K+ +V E + G L + G+ L+ + L++
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVG 220
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337
+AA G+ YL C IHRD+ + N L+ ++DFG+++ D
Sbjct: 221 DAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E R L + H NIVRL C+ K+ +V E + G L + G+ L+ + L++
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVG 220
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337
+AA G+ YL C IHRD+ + N L+ ++DFG+++ D
Sbjct: 221 DAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
A+K++ H + + E+ L K+ H NI+ L C ++ L EY P+G+L
Sbjct: 45 AAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 103
Query: 268 GEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313
+ L R S L + L A + A+G+ YL IHRD+ +
Sbjct: 104 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAA 160
Query: 314 NNILLNSDFEAHVADFGLAK 333
NIL+ ++ A +ADFGL++
Sbjct: 161 RNILVGENYVAKIADFGLSR 180
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 109 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 161
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 162 RRTDLCGTLDYLPPEM 177
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
A+K++ H + + E+ L K+ H NI+ L C ++ L EY P+G+L
Sbjct: 55 AAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
Query: 268 GEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313
+ L R S L + L A + A+G+ YL IHRD+ +
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAA 170
Query: 314 NNILLNSDFEAHVADFGLAK 333
NIL+ ++ A +ADFGL++
Sbjct: 171 RNILVGENYVAKIADFGLSR 190
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 110
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 111 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 163
Query: 343 CMSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 164 RRXXLCGTLDYLPPEM 179
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLK--AFCSNKETNLLVYEYM 262
G VAVK+L G EI+ L + IV+ + ++ + LV EY+
Sbjct: 35 TGALVAVKQLQ--HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P+G L + L R L L + + KG+ YL S +HRD+ + NIL+ S+
Sbjct: 93 PSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEA 148
Query: 323 EAHVADFGLAKYL 335
+ADFGLAK L
Sbjct: 149 HVKIADFGLAKLL 161
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 138
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L ++
Sbjct: 139 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 194
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 195 FVGTAQYVSPEL 206
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETN-----LLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
A +R L H N+VRL C+ T+ LV+E++ + L L L E
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAET 121
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
+ + +GL +LH +C I+HRD+K NIL+ S +ADFGLA+
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 168
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 111
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 112 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 164
Query: 343 CMSAVAGSYGYIAP 356
+ G+ Y+ P
Sbjct: 165 RRXXLCGTLDYLPP 178
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV-YEYMPNGSLGEVLHGKRGSFLKWEMRL 285
++ E + ++ H V+L FC + L Y NG L + + K GSF + R
Sbjct: 84 VTRERDVMSRLDHPFFVKL-YFCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRF 141
Query: 286 KIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMS 345
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 142 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
Query: 346 AVAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 198 XFVGTAQYVSPEL 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 111
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 112 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 164
Query: 343 CMSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 165 RRDDLCGTLDYLPPEM 180
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 108
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +ADFG + + S
Sbjct: 109 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH----APSS 161
Query: 343 CMSAVAGSYGYIAP 356
+ G+ Y+ P
Sbjct: 162 RRXXLCGTLDYLPP 175
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 134
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L ++
Sbjct: 135 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 190
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 191 FVGTAQYVSPEL 202
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + + ++V F + + +V E SL E LH +R + + E R
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 147
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + +G+ YLH++ +IHRD+K N+ LN D + + DFGLA ++ G E
Sbjct: 148 MR-QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKT 201
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 202 LCGTPNYIAP 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 57 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 115
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 116 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 172 FVGTAQYVSPEL 183
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 50 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 109
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 166
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 167 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 203
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFY 137
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L ++
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 193
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 194 FVGTAQYVSPEL 205
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNW 197
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNW 197
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 138
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 139 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 194
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 195 FVGTAQYVSPEL 206
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 40 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 99
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 100 LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 156
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 157 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 193
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 135
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 192 FVGTAQYVSPEL 203
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 137
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 194 FVGTAQYVSPEL 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 56 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 114
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 115 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 171 FVGTAQYVSPEL 182
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 140
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 141 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 196
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 197 FVGTAQYVSPEL 208
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 40 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 99
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 156
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 157 DCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNW 193
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L ++ + D AE+ T+ ++H++IVR C+ L+V+EYM +G L
Sbjct: 74 VAVKALKEASESARQDFQREAELLTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 269 EVL--HGKRGSFLK-----------WEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
L HG L L +A + A G+ YL +HRD+ + N
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 188
Query: 316 ILLNSDFEAHVADFGLAKYLQDT 338
L+ + DFG+++ + T
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYST 211
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 135
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 192 FVGTAQYVSPEL 203
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 137
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 194 FVGTAQYVSPEL 205
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 4 NNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG 63
NN G IP I L YL ++ ++SG IP ++QI L L+ S+N L+ +LP +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 64 NMKSLTSADFSHNNFSGEIPE-FGQYS-FFNSTSFTGN 99
++ +L F N SG IP+ +G +S F S + + N
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPV------QITQIHI----------- 43
+SRN +G IP + L L ++DLS+N L G V +IH+
Sbjct: 181 ISRNRLTGKIPPTFAN-LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239
Query: 44 ------LNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPEFGQYSFFNSTSFT 97
LN L++ N++ +LP+ + +K L S + S NN GEIP+ G F+ +++
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYA 299
Query: 98 GNPHLCGSYLNPC 110
N LCGS L C
Sbjct: 300 NNKCLCGSPLPAC 312
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + + ++V F + + +V E SL E LH +R + + E R
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 147
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + +G+ YLH++ +IHRD+K N+ LN D + + DFGLA ++ G E
Sbjct: 148 MR-QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKX 201
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 202 LCGTPNYIAP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 55 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 113
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 114 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 170 FVGTAQYVSPEL 181
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 135
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 136 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 191
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 192 FVGTAQYVSPEL 203
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 40 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 99
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 156
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 157 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 193
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L T + D AE+ T ++H +IV+ C + + ++V+EYM +G L
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLT--NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 269 EVL--HGKRGSFL--------KWEM----RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ L HG L K E+ L IA + A G+ YL S +HRD+ +
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATR 162
Query: 315 NILLNSDFEAHVADFGLAKYLQDT 338
N L+ ++ + DFG+++ + T
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYST 186
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 54 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 112
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 113 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 169 FVGTAQYVSPEL 180
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 137
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 194 FVGTAQYVSPEL 205
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 54 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 113
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 170
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 171 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 137
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 194 FVGTAQYVSPEL 205
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 137
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 138 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 193
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 194 FVGTAQYVSPEL 205
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 61 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 119
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 120 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 175
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 176 FVGTAQYVSPEL 187
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + + ++V F + + +V E SL E LH +R + + E R
Sbjct: 73 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 131
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + +G+ YLH++ +IHRD+K N+ LN D + + DFGLA ++ G E
Sbjct: 132 MR-QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKD 185
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 186 LCGTPNYIAP 195
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ E + ++ H V+L + E Y NG L + + K GSF + R
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFY 134
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
A E L YLH IIHRD+K NILLN D + DFG AK L +
Sbjct: 135 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 190
Query: 347 VAGSYGYIAPVL 358
G+ Y++P L
Sbjct: 191 FVGTAQYVSPEL 202
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
+ +G L+ K ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVN 159
Query: 320 SDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 160 EDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
+S EI + + ++V F + + +V E SL E LH +R + + E R
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF 147
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
+ + +G+ YLH++ +IHRD+K N+ LN D + + DFGLA ++ G E
Sbjct: 148 MR-QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKD 201
Query: 347 VAGSYGYIAP 356
+ G+ YIAP
Sbjct: 202 LCGTPNYIAP 211
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 63 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 122
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 179
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 180 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 64 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 123
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 180
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 181 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 217
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 110
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +A+FG + + S
Sbjct: 111 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVH----APSS 163
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 164 RRTTLCGTLDYLPPEM 179
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 49 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 157
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 158 PSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 202
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 49 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 157
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 158 PSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 202
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L E+ +RH NI+RL + + L+ EY P G++ L K F E
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFD--EQ 111
Query: 284 RLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE 342
R I E A LSY H S +IHRD+K N+LL S E +A+FG + + S
Sbjct: 112 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVH----APSS 164
Query: 343 CMSAVAGSYGYIAPVL 358
+ + G+ Y+ P +
Sbjct: 165 RRTTLCGTLDYLPPEM 180
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L ++ + D AE+ T+ ++H++IVR C+ L+V+EYM +G L
Sbjct: 45 VAVKALKEASESARQDFQREAELLTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 269 EVL--HGKRGSFLK-----------WEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
L HG L L +A + A G+ YL +HRD+ + N
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 159
Query: 316 ILLNSDFEAHVADFGLAKYLQDT 338
L+ + DFG+++ + T
Sbjct: 160 CLVGQGLVVKIGDFGMSRDIYST 182
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 230 EIRTLGKIRHRNIVRLKAFCS--NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKI 287
EI L K+ H N+V+L N++ +V+E + G + EV K S + +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
I KG+ YLH+ IIHRD+K +N+L+ D +ADFG++ + G+ +S
Sbjct: 146 LI---KGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFK--GSDALLSNT 197
Query: 348 AGSYGYIAP 356
G+ ++AP
Sbjct: 198 VGTPAFMAP 206
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L ++ + D AE+ T+ ++H++IVR C+ L+V+EYM +G L
Sbjct: 51 VAVKALKEASESARQDFQREAELLTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 269 EVL--HGKRGSFLK-----------WEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
L HG L L +A + A G+ YL +HRD+ + N
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 165
Query: 316 ILLNSDFEAHVADFGLAKYLQDT 338
L+ + DFG+++ + T
Sbjct: 166 CLVGQGLVVKIGDFGMSRDIYST 188
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEYMPNG 265
++VAVKKL + H E+R L ++H N++ L F Y+
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 266 SLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+G + L + FL +++ +GL Y+H S IIHRD+K +N+
Sbjct: 106 LMGADLNNIVKCQALSDEHVQFLVYQL--------LRGLKYIH---SAGIIHRDLKPSNV 154
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N D E + DFGLA+ A E M+ + Y AP +L W
Sbjct: 155 AVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNW 195
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEYMPNG 265
++VAVKKL + H E+R L ++H N++ L F Y+
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 266 SLGEVLHG-KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
+G L+ + L E + + +GL Y+H S IIHRD+K +N+ +N D E
Sbjct: 114 LMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSEL 170
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+ DFGLA+ A E M+ + Y AP +L W
Sbjct: 171 RILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNW 203
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAF--CSNKETNLLVYEYM 262
GE VAVKK+ + S+ EI L ++ H NIV L N LV++YM
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 263 PNGSLGEVLHGK-RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
LH R + L+ + + + K + YLH S ++HRD+K +NILLN++
Sbjct: 94 ETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAE 145
Query: 322 FEAHVADFGLAK 333
VADFGL++
Sbjct: 146 CHVKVADFGLSR 157
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 21/140 (15%)
Query: 205 NGEQVAVKKLLGITKGSSHDNG---LSAEIRTLGKIRHRNIVRLKA---FCSNKETNL-L 257
+GE VAVK SS D EI +RH NI+ A N T L L
Sbjct: 30 HGESVAVKIF------SSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWL 83
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVK 312
+ Y +GSL + L + L+ + L++A+ AA GL++LH + P I HRD K
Sbjct: 84 ITHYHEHGSLYDFLQRQT---LEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 313 SNNILLNSDFEAHVADFGLA 332
S N+L+ S+ + +AD GLA
Sbjct: 141 SRNVLVKSNLQCCIADLGLA 160
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
+ +G L+ K ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVN 159
Query: 320 SDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 160 EDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 50 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 109
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 166
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 167 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 203
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 55 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 114
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 163
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 164 PSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 208
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIMLNW 197
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 49 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 165
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 166 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 202
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 43 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 102
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 159
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 160 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 196
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 205 NGEQVAVKKLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
N E VA+KK+ K S+ + E+R L K+RH N ++ + + T LV EY
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC- 136
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GS ++L + + E+ + A +GL+YLH S +IHRDVK+ NILL+
Sbjct: 137 LGSASDLLEVHKKPLQEVEI-AAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGL 192
Query: 324 AHVADFGLAKYL 335
+ DFG A +
Sbjct: 193 VKLGDFGSASIM 204
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
GE A+KK+ + D G+ + EI L +++H NIV+L K+ +LV+E+
Sbjct: 26 GETFALKKI----RLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
+ + L ++L G + ++ G++Y H ++HRD+K N+L+N +
Sbjct: 82 L-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINRE 136
Query: 322 FEAHVADFGLAK 333
E +ADFGLA+
Sbjct: 137 GELKIADFGLAR 148
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 49 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 165
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 166 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 202
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
GE A+KK+ + D G+ + EI L +++H NIV+L K+ +LV+E+
Sbjct: 26 GETFALKKI----RLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
+ + L ++L G + ++ G++Y H ++HRD+K N+L+N +
Sbjct: 82 L-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINRE 136
Query: 322 FEAHVADFGLAK 333
E +ADFGLA+
Sbjct: 137 GELKIADFGLAR 148
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEYMPNG 265
++VAVKKL + H E+R L ++H N++ L F Y+
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 266 SLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+G + L + FL +++ +GL Y+H S IIHRD+K +N+
Sbjct: 114 LMGADLNNIVKCQALSDEHVQFLVYQL--------LRGLKYIH---SAGIIHRDLKPSNV 162
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N D E + DFGLA+ A E M+ + Y AP +L W
Sbjct: 163 AVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNW 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 41 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 100
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 157
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 158 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 194
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 46 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 162
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 163 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 199
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 51 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 159
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 160 PSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 204
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 46 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 162
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 163 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 199
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 40 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 99
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 156
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 157 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 193
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 50 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 109
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 158
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 159 PSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 203
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 50 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 109
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 158
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 159 PSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 203
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 103 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 158
Query: 264 NGSLGEVLHGKRGSFLKWEMR--------------LKIAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ + A + A+G+ YL S IHR
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 215
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 216 DLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 46 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 162
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 163 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 199
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 64 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 123
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 180
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M + Y AP +L W
Sbjct: 181 DCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIMLNW 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 41 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 100
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 157
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 158 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 194
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
GE A+KK+ + D G+ + EI L +++H NIV+L K+ +LV+E+
Sbjct: 26 GETFALKKI----RLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
+ + L ++L G + ++ G++Y H ++HRD+K N+L+N +
Sbjct: 82 L-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINRE 136
Query: 322 FEAHVADFGLAK 333
E +ADFGLA+
Sbjct: 137 GELKIADFGLAR 148
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 42 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 101
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 158
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 159 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 195
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAF---CSNKETNL-LVYE 260
GE+VAVK + S EI +RH NI+ A + T L L+ +
Sbjct: 59 RGEKVAVKVFFTTEEASWFRE---TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITD 115
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSNN 315
Y NGSL + L + + L + LK+A + GL +LH + P I HRD+KS N
Sbjct: 116 YHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN 172
Query: 316 ILLNSDFEAHVADFGLA-KYLQDT 338
IL+ + +AD GLA K++ DT
Sbjct: 173 ILVKKNGTCCIADLGLAVKFISDT 196
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 56 TKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 115
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 172
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 173 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 209
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 252 KETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
K T+L +V EY GS+ +++ + + + E+ I KGL YLH IHRD
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI-ATILQSTLKGLEYLHFMRK---IHRD 150
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+K+ NILLN++ A +ADFG+A L D A + V G+ ++AP
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAP 194
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 55 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 114
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 171
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 172 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 208
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 64 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 123
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 180
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 181 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 205 NGEQVAVKKLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
N E VA+KK+ K S+ + E+R L K+RH N ++ + + T LV EY
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC- 97
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GS ++L + + E+ + A +GL+YLH S +IHRDVK+ NILL+
Sbjct: 98 LGSASDLLEVHKKPLQEVEI-AAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGL 153
Query: 324 AHVADFGLAKYL 335
+ DFG A +
Sbjct: 154 VKLGDFGSASIM 165
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 63 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 122
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 179
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 180 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 67 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 126
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 183
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 184 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 56 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 115
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 172
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 173 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 209
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 46 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 154
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 155 PSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 199
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ S + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGL ++ D M+ + Y AP +L W
Sbjct: 161 DSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 56 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 115
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 172
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 173 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 51 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 159
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 160 PSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNW 204
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 51 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 159
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 160 PSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNW 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
A+K++ H + + E+ L K+ H NI+ L C ++ L EY P+G+L
Sbjct: 52 AAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
Query: 268 GEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313
+ L R S L + L A + A+G+ YL IHR++ +
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAA 167
Query: 314 NNILLNSDFEAHVADFGLAK 333
NIL+ ++ A +ADFGL++
Sbjct: 168 RNILVGENYVAKIADFGLSR 187
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + D AE+ L ++H +IV+ C + ++V+EYM +G L
Sbjct: 46 VAVKTLKDASDNARKDFHREAEL--LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 269 EVL--HGKRGSF---------LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+ L HG L L IA + A G+ YL S +HRD+ + N L
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCL 160
Query: 318 LNSDFEAHVADFGLAKYLQDT 338
+ + + DFG+++ + T
Sbjct: 161 VGENLLVKIGDFGMSRDVYST 181
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLXQVIQMELDHERMSYLLYQM--------LXGIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 51 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 159
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 160 PSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNW 204
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
+V K+++ K H N E L + H I+R+ + + ++ +Y+ G L
Sbjct: 37 KVLKKEIVVRLKQVEHTND---ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL 93
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+L K F + A E L YLH S II+RD+K NILL+ + +
Sbjct: 94 FSLLR-KSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKIT 148
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFG AKY+ D C G+ YIAP
Sbjct: 149 DFGFAKYVPDVTYXLC-----GTPDYIAP 172
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 62 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 264 NGSLGEVLHGKRGSFLKW--------EMRLK------IAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ E +L A + A+G+ YL S IHR
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 55 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 110
Query: 264 NGSLGEVLHGKRGSFLKW--------EMRLK------IAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ E +L A + A+G+ YL S IHR
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 167
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 51 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 106
Query: 264 NGSLGEVLHGKRGSFLKW--------EMRLK------IAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ E +L A + A+G+ YL S IHR
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 163
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLAR 187
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 54 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 109
Query: 264 NGSLGEVLHGKRGSFLKW--------EMRLK------IAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ E +L A + A+G+ YL S IHR
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 166
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 47 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 102
Query: 264 NGSLGEVLHGKRGSFLKW--------EMRLK------IAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ E +L A + A+G+ YL S IHR
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 159
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 62 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 264 NGSLGEVLHGKRGSFLKW--------EMRLK------IAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ E +L A + A+G+ YL S IHR
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 67 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 126
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 183
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + DFGLA++ D M + Y AP +L W
Sbjct: 184 DCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIMLNW 220
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 62 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 264 NGSLGEVLHGKRGSFLKWEMR--------------LKIAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L +R L++ + A + A+G+ YL S IHR
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 24/139 (17%)
Query: 237 IRHRNIVRL-----KAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEA 291
+ H NI R + + LLV EY PNGSL + L W ++A
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHSV 120
Query: 292 AKGLSYLHHDC------SPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG------ 339
+GL+YLH + P I HRD+ S N+L+ +D ++DFGL+ L TG
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL--TGNRLVRP 178
Query: 340 ASECMSAVA--GSYGYIAP 356
E +A++ G+ Y+AP
Sbjct: 179 GEEDNAAISEVGTIRYMAP 197
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+N+ +N D E + DFGLA++ D M+ + Y AP
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 203 TPNGEQVAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
T G++VA+K + + S + EI L +RH +I++L +K+ ++V EY
Sbjct: 36 TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 95
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
N ++ +R + E R + + + Y H I+HRD+K N+LL+
Sbjct: 96 AGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 149
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ADFGL+ + D + GS Y AP
Sbjct: 150 LNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAP 181
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 203 TPNGEQVAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
T G++VA+K + + S + EI L +RH +I++L +K+ ++V EY
Sbjct: 30 TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 89
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
N ++ +R + E R + + + Y H I+HRD+K N+LL+
Sbjct: 90 AGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 143
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ADFGL+ + D + GS Y AP
Sbjct: 144 LNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAP 175
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 203 TPNGEQVAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
T G++VA+K + + S + EI L +RH +I++L +K+ ++V EY
Sbjct: 26 TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 85
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
N ++ +R + E R + + + Y H I+HRD+K N+LL+
Sbjct: 86 AGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 139
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ADFGL+ + D + GS Y AP
Sbjct: 140 LNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAP 171
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 203 TPNGEQVAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
T G++VA+K + + S + EI L +RH +I++L +K+ ++V EY
Sbjct: 35 TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
N ++ +R + E R + + + Y H I+HRD+K N+LL+
Sbjct: 95 AGNELFDYIV--QRDKMSEQEAR-RFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEH 148
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ADFGL+ + D + GS Y AP
Sbjct: 149 LNVKIADFGLSNIMTD---GNFLKTSCGSPNYAAP 180
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + D+GLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
G VA+K++ + + D G+ + EI L ++ H NIV L ++ LV+E
Sbjct: 44 QGRIVALKRI----RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+M L +VL + ++++ + + +G+++ H I+HRD+K N+L+NS
Sbjct: 100 FM-EKDLKKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---RILHRDLKPQNLLINS 154
Query: 321 DFEAHVADFGLAK 333
D +ADFGLA+
Sbjct: 155 DGALKLADFGLAR 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
G VA+K++ + + D G+ + EI L ++ H NIV L ++ LV+E
Sbjct: 44 QGRIVALKRI----RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+M L +VL + ++++ + + +G+++ H I+HRD+K N+L+NS
Sbjct: 100 FM-EKDLKKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---RILHRDLKPQNLLINS 154
Query: 321 DFEAHVADFGLAK 333
D +ADFGLA+
Sbjct: 155 DGALKLADFGLAR 167
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLXQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 28/168 (16%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-----KAFCSNKETNLLVY 259
+G ++AVKKL + H E+R L ++H N++ L A + ++ +
Sbjct: 75 SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
++ L ++ ++ + FL +++ +GL Y+H S IIHRD+K +
Sbjct: 135 THLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLKPS 183
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
N+ +N D E + DFGLA++ D M+ + Y AP +L W
Sbjct: 184 NLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 275 RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334
+G + ++ KIA+ K L +LH S +IHRDVK +N+L+N+ + + DFG++ Y
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY 203
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
L D+ A + AG Y+AP
Sbjct: 204 LVDSVAK---TIDAGCKPYMAP 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 105 -DANLXQVIQMELDHERMSYLLYQM--------LXGIKHLH---SAGIIHRDLKPSNIVV 152
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 153 KSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 192
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLXQVIQMELDHERMSYLLYQM--------LXGIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G+QVAVKK+ + L E+ + H N+V + + + +V E++
Sbjct: 69 TGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEG 126
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L +++ R + E + + + LSYLH+ +IHRD+KS++ILL SD
Sbjct: 127 GALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRI 180
Query: 325 HVADFGL 331
++DFG
Sbjct: 181 KLSDFGF 187
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
E VA+K++ + D G+ + EI L +++H+NIVRL + + LV+E+
Sbjct: 28 EIVALKRV----RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
+ L + G L E+ + KGL + H S ++HRD+K N+L+N +
Sbjct: 84 -DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNG 138
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
E +ADFGLA+ C SA + Y P
Sbjct: 139 ELKLADFGLARAF--GIPVRCYSAEVVTLWYRPP 170
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
QVAVK +L SS L +E++ + ++ H NIV L C+ L++EY G
Sbjct: 77 QVAVK-MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 267 LGEVLHGKRGSF---------------------LKWEMRLKIAIEAAKGLSYLHHDCSPL 305
L L KR F L +E L A + AKG+ +L
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC-- 193
Query: 306 IIHRDVKSNNILLNSDFEAHVADFGLAK 333
+HRD+ + N+L+ + DFGLA+
Sbjct: 194 -VHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GLS+ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 205 NGEQVAVKKLLG-ITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
G++ AVK + K + L E++ L ++ H NI +L F +K LV E
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYT 109
Query: 264 NGSL-GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-- 320
G L E++ KR S + +I + G++Y H + I+HRD+K N+LL S
Sbjct: 110 GGELFDEIISRKRFSEVD---AARIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKS 163
Query: 321 -DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
D + DFGL+ + + AS+ G+ YIAP
Sbjct: 164 KDANIRIIDFGLSTHFE---ASKKXKDKIGTAYYIAP 197
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVY 259
G VAVKKL + +H E+ L + H+NI+ L F K + LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 260 EYMPNGSLGEVLHGK----RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
E M + +L +V+H + R S+L ++M G+ +LH S IIHRD+K +N
Sbjct: 109 ELM-DANLCQVIHMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSN 156
Query: 316 ILLNSDFEAHVADFGLAK 333
I++ SD + DFGLA+
Sbjct: 157 IVVKSDCTLKILDFGLAR 174
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
+VAVK +L T + L +E++ + + +H NIV L C++ L++ EY G
Sbjct: 78 KVAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 267 LGEVLHGKRGSFLKWEMR--------------LKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
L L KR L++ L + + A+G+++L S IHRDV
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 193
Query: 313 SNNILLNSDFEAHVADFGLAK 333
+ N+LL + A + DFGLA+
Sbjct: 194 ARNVLLTNGHVAKIGDFGLAR 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 221 SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL-GEVLHGKRGSFL 279
+S+ L E+ L ++ H NI++L F +K LV E G L E++ ++ S +
Sbjct: 62 TSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV 121
Query: 280 KWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNS---DFEAHVADFGLAKYL 335
+ +K + G +YLH H+ I+HRD+K N+LL S D + DFGL+ +
Sbjct: 122 DAAVIMK---QVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174
Query: 336 QDTGASECMSAVAGSYGYIAP 356
+ G M G+ YIAP
Sbjct: 175 EVGGK---MKERLGTAYYIAP 192
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
+VAVK +L T + L +E++ + + +H NIV L C++ L++ EY G
Sbjct: 70 KVAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 267 LGEVLHGKRGSFLK------WEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
L L K + L E+R L + + A+G+++L S IHRDV + N+LL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 185
Query: 319 NSDFEAHVADFGLAK 333
+ A + DFGLA+
Sbjct: 186 TNGHVAKIGDFGLAR 200
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL-G 268
A+K + + +S ++ L E+ L + H NI++L F +K LV E G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNS---DFEA 324
E++H R F + + + I + G++YLH H+ I+HRD+K N+LL S D
Sbjct: 126 EIIH--RMKFNEVDAAV-IIKQVLSGVTYLHKHN----IVHRDLKPENLLLESKEKDALI 178
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFGL+ ++ + M G+ YIAP
Sbjct: 179 KIVDFGLSAVFEN---QKKMKERLGTAYYIAP 207
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 203 TPNGEQVAVK----KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258
P+G+ V+V K +++ + D+ + E+ + + HRN++RL + V
Sbjct: 35 APSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVNAMHSLDHRNLIRLYGVVLTPPMKM-V 92
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
E P GSL + L +G FL + + A++ A+G+ YL S IHRD+ + N+LL
Sbjct: 93 TELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLL 148
Query: 319 NSDFEAHVADFGLAKYL 335
+ + DFGL + L
Sbjct: 149 ATRDLVKIGDFGLMRAL 165
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNL-LVY 259
GE+VAVK + S AEI +RH NI+ A NK+ T L LV
Sbjct: 64 RGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVS 119
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSN 314
+Y +GSL + L+ + E +K+A+ A GL++LH + P I HRD+KS
Sbjct: 120 DYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAV----AGSYGYIAP 356
NIL+ + +AD GLA ++ A++ + G+ Y+AP
Sbjct: 177 NILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNL-LVY 259
GE+VAVK + S AEI +RH NI+ A NK+ T L LV
Sbjct: 51 RGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVS 106
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSN 314
+Y +GSL + L+ + E +K+A+ A GL++LH + P I HRD+KS
Sbjct: 107 DYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 163
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAV----AGSYGYIAP 356
NIL+ + +AD GLA ++ A++ + G+ Y+AP
Sbjct: 164 NILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L EI +RH NI+R+ + +++ L+ E+ P G L + L K G F + +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDE-QR 115
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
E A L Y H +IHRD+K N+L+ E +ADFG + + S
Sbjct: 116 SATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVH----APSLR 168
Query: 344 MSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 169 RRXMCGTLDYLPPEM 183
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
+VAVK +L T + L +E++ + + +H NIV L C++ L++ EY G
Sbjct: 78 KVAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 267 LGEVLHGKRGSFLK------WEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
L L K + L E+R L + + A+G+++L S IHRDV + N+LL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 193
Query: 319 NSDFEAHVADFGLAK 333
+ A + DFGLA+
Sbjct: 194 TNGHVAKIGDFGLAR 208
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 203 TPNGEQVAVK----KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258
P+G+ V+V K +++ + D+ + E+ + + HRN++RL + V
Sbjct: 31 APSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVNAMHSLDHRNLIRLYGVVLTPPMKM-V 88
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
E P GSL + L +G FL + + A++ A+G+ YL S IHRD+ + N+LL
Sbjct: 89 TELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
Query: 319 NSDFEAHVADFGLAKYL 335
+ + DFGL + L
Sbjct: 145 ATRDLVKIGDFGLMRAL 161
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L EI +RH NI+R+ + +++ L+ E+ P G L + L K G F + +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDE-QR 115
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
E A L Y H +IHRD+K N+L+ E +ADFG + + S
Sbjct: 116 SATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVH----APSLR 168
Query: 344 MSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 169 RRXMCGTLDYLPPEM 183
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 208 QVAVKKLLGITKGSSHDNGL--SAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++ K+ I D L EI L K+ H I+++K F + E +V E M G
Sbjct: 180 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 238
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
L + + G + RLK A + + YLH + IIHRD+K N+LL+
Sbjct: 239 ELFDKVVGNK--------RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 287
Query: 320 SDFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S E + DFG +K L G + M + G+ Y+AP
Sbjct: 288 SQEEDCLIKITDFGHSKIL---GETSLMRTLCGTPTYLAP 324
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 208 QVAVKKLLGITKGSSHDNGL--SAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++ K+ I D L EI L K+ H I+++K F + E +V E M G
Sbjct: 166 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 224
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
L + + G + RLK A + + YLH + IIHRD+K N+LL+
Sbjct: 225 ELFDKVVGNK--------RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 273
Query: 320 SDFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S E + DFG +K L G + M + G+ Y+AP
Sbjct: 274 SQEEDCLIKITDFGHSKIL---GETSLMRTLCGTPTYLAP 310
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L EI +RH NI+R+ + +++ L+ E+ P G L + L K G F + +
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDE-QR 116
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
E A L Y H +IHRD+K N+L+ E +ADFG + + S
Sbjct: 117 SATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVH----APSLR 169
Query: 344 MSAVAGSYGYIAPVL 358
+ G+ Y+ P +
Sbjct: 170 RRXMCGTLDYLPPEM 184
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 203 TPNGEQVAVK----KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258
P+G+ V+V K +++ + D+ + E+ + + HRN++RL + V
Sbjct: 31 APSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVNAMHSLDHRNLIRLYGVVLTPPMKM-V 88
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
E P GSL + L +G FL + + A++ A+G+ YL S IHRD+ + N+LL
Sbjct: 89 TELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
Query: 319 NSDFEAHVADFGLAKYL 335
+ + DFGL + L
Sbjct: 145 ATRDLVKIGDFGLMRAL 161
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 203 TPNGEQVAVK----KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258
P+G+ V+V K +++ + D+ + E+ + + HRN++RL + V
Sbjct: 31 APSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVNAMHSLDHRNLIRLYGVVLTPPMKM-V 88
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
E P GSL + L +G FL + + A++ A+G+ YL S IHRD+ + N+LL
Sbjct: 89 TELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
Query: 319 NSDFEAHVADFGLAKYL 335
+ + DFGL + L
Sbjct: 145 ATRDLVKIGDFGLMRAL 161
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 203 TPNGEQVAVK----KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258
P+G+ V+V K +++ + D+ + E+ + + HRN++RL + V
Sbjct: 41 APSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVNAMHSLDHRNLIRLYGVVLTPPMKM-V 98
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
E P GSL + L +G FL + + A++ A+G+ YL S IHRD+ + N+LL
Sbjct: 99 TELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLL 154
Query: 319 NSDFEAHVADFGLAKYL 335
+ + DFGL + L
Sbjct: 155 ATRDLVKIGDFGLMRAL 171
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 203 TPNGEQVAVK----KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258
P+G+ V+V K +++ + D+ + E+ + + HRN++RL + V
Sbjct: 41 APSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVNAMHSLDHRNLIRLYGVVLTPPMKM-V 98
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
E P GSL + L +G FL + + A++ A+G+ YL S IHRD+ + N+LL
Sbjct: 99 TELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLL 154
Query: 319 NSDFEAHVADFGLAKYL 335
+ + DFGL + L
Sbjct: 155 ATRDLVKIGDFGLMRAL 171
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 203 TPNGEQVAVK----KLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258
P+G+ V+V K +++ + D+ + E+ + + HRN++RL + V
Sbjct: 35 APSGKTVSVAVKCLKPDVLSQPEAMDDFIR-EVNAMHSLDHRNLIRLYGVVLTPPMKM-V 92
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
E P GSL + L +G FL + + A++ A+G+ YL S IHRD+ + N+LL
Sbjct: 93 TELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLE---SKRFIHRDLAARNLLL 148
Query: 319 NSDFEAHVADFGLAKYL 335
+ + DFGL + L
Sbjct: 149 ATRDLVKIGDFGLMRAL 165
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVY 259
G VAVKKL + +H E+ L + H+NI+ L F K + LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 260 EYMPNGSLGEVLHGK----RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
E M + +L +V+H + R S+L ++M G+ +LH S IIHRD+K +N
Sbjct: 107 ELM-DANLCQVIHMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSN 154
Query: 316 ILLNSDFEAHVADFGLAK 333
I++ SD + DFGLA+
Sbjct: 155 IVVKSDCTLKILDFGLAR 172
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 221 SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL-GEVLHGKRGSFL 279
+S+ L E+ L ++ H NI++L F +K LV E G L E++ ++ S +
Sbjct: 45 TSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV 104
Query: 280 KWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNS---DFEAHVADFGLAKYL 335
+ +K + G +YLH H+ I+HRD+K N+LL S D + DFGL+ +
Sbjct: 105 DAAVIMK---QVLSGTTYLHKHN----IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 157
Query: 336 QDTGASECMSAVAGSYGYIAP 356
+ G M G+ YIAP
Sbjct: 158 EVGGK---MKERLGTAYYIAP 175
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + DF LA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNL-LVY 259
GE+VAVK + S AEI +RH NI+ A NK+ T L LV
Sbjct: 25 RGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVS 80
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSN 314
+Y +GSL + L+ + E +K+A+ A GL++LH + P I HRD+KS
Sbjct: 81 DYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAV----AGSYGYIAP 356
NIL+ + +AD GLA ++ A++ + G+ Y+AP
Sbjct: 138 NILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 181
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNL-LVY 259
GE+VAVK + S AEI +RH NI+ A NK+ T L LV
Sbjct: 28 RGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVS 83
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSN 314
+Y +GSL + L+ + E +K+A+ A GL++LH + P I HRD+KS
Sbjct: 84 DYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 140
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAV----AGSYGYIAP 356
NIL+ + +AD GLA ++ A++ + G+ Y+AP
Sbjct: 141 NILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 184
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNL-LVY 259
GE+VAVK + S AEI +RH NI+ A NK+ T L LV
Sbjct: 26 RGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVS 81
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSN 314
+Y +GSL + L+ + E +K+A+ A GL++LH + P I HRD+KS
Sbjct: 82 DYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 138
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAV----AGSYGYIAP 356
NIL+ + +AD GLA ++ A++ + G+ Y+AP
Sbjct: 139 NILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 182
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCS----NKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEM 283
A +R L H N+VRL C+ ++ET L LV+E++ + L L + E
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTET 121
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
+ + +GL +LH S ++HRD+K NIL+ S + +ADFGLA+ A
Sbjct: 122 IKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 344 MSAVAGSYGYIAP 356
+++V + Y AP
Sbjct: 176 LTSVVVTLWYRAP 188
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 88
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 89 MDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 145
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 146 KLADFGLAR 154
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNL-LVY 259
GE+VAVK + S AEI +RH NI+ A NK+ T L LV
Sbjct: 31 RGEEVAVKIFSSREERSWFRE---AEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVS 86
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSN 314
+Y +GSL + L+ + E +K+A+ A GL++LH + P I HRD+KS
Sbjct: 87 DYHEHGSLFDYLNRYTVTV---EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 143
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAV----AGSYGYIAP 356
NIL+ + +AD GLA ++ A++ + G+ Y+AP
Sbjct: 144 NILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 187
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M + G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLV--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M + G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLV--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M + G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLV--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 87
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 88 MDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 144
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 145 KLADFGLAR 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 141
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 142 KLADFGLAR 150
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 26/151 (17%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG--------SLGEVLHGKRGSFLKW 281
EI + +++H NIVRL + LV+E+M N ++G G + +K+
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 282 EMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL---QDT 338
+ +GL++ H + I+HRD+K N+L+N + + DFGLA+ +T
Sbjct: 113 -----FQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164
Query: 339 GASECMS-------AVAGSYGYIAPVLGWYC 362
+SE ++ + GS Y + W C
Sbjct: 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 208 QVAVKKLLGITKGSSHDNGL--SAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++ K+ I D L EI L K+ H I+++K F + E +V E M G
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG 99
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
L + + G + RLK A + + YLH + IIHRD+K N+LL+
Sbjct: 100 ELFDKVVGNK--------RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 148
Query: 320 SDFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S E + DFG +K L G + M + G+ Y+AP
Sbjct: 149 SQEEDCLIKITDFGHSKIL---GETSLMRTLCGTPTYLAP 185
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 143
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 144 KLADFGLAR 152
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 87
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 144
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 145 KLADFGLAR 153
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIR--TLGKIR-------HRNIVRLKAFCSNKET 254
P ++ AVK ++ +T G S E+R TL ++ H NI++LK
Sbjct: 40 PTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 98
Query: 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
LV++ M G L + L ++ + + E R ++ +E L L+ I+HRD+K
Sbjct: 99 FFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLK 151
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
NILL+ D + DFG + L D G E + +V G+ Y+AP
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQL-DPG--EKLRSVCGTPSYLAP 192
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 92
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 93 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 149
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 150 KLADFGLAR 158
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 89
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 90 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 146
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 147 KLADFGLAR 155
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 88
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 145
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 146 KLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 87
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 144
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 145 KLADFGLAR 153
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 89
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 90 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 146
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 147 KLADFGLAR 155
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 88
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 145
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 146 KLADFGLAR 154
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 141
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 142 KLADFGLAR 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 141
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 142 KLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 141
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 142 KLADFGLAR 150
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 208 QVAVKKLLGITKGSSHDNGL--SAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++ K+ I D L EI L K+ H I+++K F + E +V E M G
Sbjct: 40 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 98
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
L + + G + RLK A + + YLH + IIHRD+K N+LL+
Sbjct: 99 ELFDKVVGNK--------RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 147
Query: 320 SDFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S E + DFG +K L G + M + G+ Y+AP
Sbjct: 148 SQEEDCLIKITDFGHSKIL---GETSLMRTLCGTPTYLAP 184
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 208 QVAVKKLLGITKGSSHDNGL--SAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++ K+ I D L EI L K+ H I+++K F + E +V E M G
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
L + + G + RLK A + + YLH + IIHRD+K N+LL+
Sbjct: 100 ELFDKVVGNK--------RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 148
Query: 320 SDFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S E + DFG +K L G + M + G+ Y+AP
Sbjct: 149 SQEEDCLIKITDFGHSKIL---GETSLMRTLCGTPTYLAP 185
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 143
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 144 KLADFGLAR 152
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 92
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 93 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 149
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 150 KLADFGLAR 158
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMP 263
+VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 62 KVAVKML----KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 264 NGSLGEVLHGKRGSFLKW--------EMRLK------IAIEAAKGLSYLHHDCSPLIIHR 309
G+L E L + L++ E +L A + A+G+ YL S IHR
Sbjct: 118 KGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 310 DVKSNNILLNSDFEAHVADFGLAK 333
D+ + N+L+ D +ADFGLA+
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 87
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAI 144
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 145 KLADFGLAR 153
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
+ + EI L KI+H NIV L + L+ + + G L + + K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERD 117
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL---LNSDFEAHVADFGLAKYLQDTGA 340
++ + + YL HD I+HRD+K N+L L+ D + ++DFGL+K ++D G+
Sbjct: 118 ASRLIFQVLDAVKYL-HDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGS 173
Query: 341 SECMSAVAGSYGYIAP 356
+S G+ GY+AP
Sbjct: 174 --VLSTACGTPGYVAP 187
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 275 RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334
+G + ++ KIA+ K L +LH S +IHRDVK +N+L+N+ + + DFG++ Y
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY 159
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
L D A + AG Y+AP
Sbjct: 160 LVDDVAKDI---DAGCKPYMAP 178
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 208 QVAVKKLLGITKGSSHDNGL--SAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++ K+ I D L EI L K+ H I+++K F + E +V E M G
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
L + + G + RLK A + + YLH + IIHRD+K N+LL+
Sbjct: 100 ELFDKVVGNK--------RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 148
Query: 320 SDFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S E + DFG +K L G + M + G+ Y+AP
Sbjct: 149 SQEEDCLIKITDFGHSKIL---GETSLMRTLCGTPTYLAP 185
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK------ETNLLV 258
G+QVA+KK+ ++ E++ L +H NI+ +K ++ +V
Sbjct: 79 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 138
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ M L +++H + L E + +GL Y+H S +IHRD+K +N+L+
Sbjct: 139 LDLM-ESDLHQIIHSSQP--LTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLV 192
Query: 319 NSDFEAHVADFGLAKYLQDTGASE--CMSAVAGSYGYIAPVL 358
N + E + DFG+A+ L + A M+ + Y AP L
Sbjct: 193 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-------- 256
G++VA+KK+L + EI+ L ++H N+V L C K +
Sbjct: 42 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 101
Query: 257 LVYEYMPN---GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313
LV+++ + G L VL S +K M++ + GL Y+H + I+HRD+K+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIHRNK---ILHRDMKA 153
Query: 314 NNILLNSDFEAHVADFGLAK 333
N+L+ D +ADFGLA+
Sbjct: 154 ANVLITRDGVLKLADFGLAR 173
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 208 QVAVKKLLGITKGSSHDNGL--SAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++ K+ I D L EI L K+ H I+++K F + E +V E M G
Sbjct: 47 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG 105
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
L + + G + RLK A + + YLH + IIHRD+K N+LL+
Sbjct: 106 ELFDKVVGNK--------RLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLS 154
Query: 320 SDFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S E + DFG +K L G + M + G+ Y+AP
Sbjct: 155 SQEEDCLIKITDFGHSKIL---GETSLMRTLCGTPTYLAP 191
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 143
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 144 KLADFGLAR 152
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 15/159 (9%)
Query: 203 TPNGEQVAVKKLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
TP E A K++ K S+ D L E R ++H NIVRL S + + LV++
Sbjct: 54 TPTQEYAA--KIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 111
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNS 320
+ G L E + R + + + I + + ++++H HD I+HRD+K N+LL S
Sbjct: 112 VTGGELFEDIVA-REYYSEADASHCIH-QILESVNHIHQHD----IVHRDLKPENLLLAS 165
Query: 321 DFE---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ +ADFGLA +Q G + AG+ GY++P
Sbjct: 166 KCKGAAVKLADFGLAIEVQ--GEQQAWFGFAGTPGYLSP 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 88
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 89 MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAI 145
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 146 KLADFGLAR 154
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + +V EYMP G+L
Sbjct: 60 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 117 DYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVAD 173
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 174 FGLSRLM 180
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ +L +++H + + + +++ +A + L++ H + IIHRDVK NI
Sbjct: 93 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 317 LLNSDFEAHVADFGLAKYLQDTGAS-ECMSAVAGSYGYIAP 356
L+++ V DFG+A+ + D+G S +AV G+ Y++P
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCS----NKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEM 283
A +R L H N+VRL C+ ++ET L LV+E++ + L L + E
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTET 121
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
+ + +GL +LH S ++HRD+K NIL+ S + +ADFGLA+ A
Sbjct: 122 IKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 344 MSAVAGSYGYIAP 356
+++V + Y AP
Sbjct: 176 LTSVVVTLWYRAP 188
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAI 143
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 144 KLADFGLAR 152
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCS----NKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEM 283
A +R L H N+VRL C+ ++ET L LV+E++ + L L + E
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTET 121
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
+ + +GL +LH S ++HRD+K NIL+ S + +ADFGLA+ A
Sbjct: 122 IKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--- 175
Query: 344 MSAVAGSYGYIAP 356
+++V + Y AP
Sbjct: 176 LTSVVVTLWYRAP 188
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
+ + EI L KI+H NIV L + L+ + + G L + + K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERD 117
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL---LNSDFEAHVADFGLAKYLQDTGA 340
++ + + YL HD I+HRD+K N+L L+ D + ++DFGL+K ++D G+
Sbjct: 118 ASRLIFQVLDAVKYL-HDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGS 173
Query: 341 SECMSAVAGSYGYIAP 356
+S G+ GY+AP
Sbjct: 174 --VLSTACGTPGYVAP 187
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 150 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 197
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 198 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 237
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 86
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 87 MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAI 143
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 144 KLADFGLAR 152
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 105 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 152
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 153 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 192
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 113 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 160
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 161 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 200
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 111 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 158
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 159 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
E+ G+L + + +RG L + L++ + KG+ Y+H S +IHRD+K +NI L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLV 170
Query: 320 SDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ + DFGL L++ G + G+ Y++P
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSP 204
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 106 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 153
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 154 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 193
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIR--TLGKIR-------HRNIVRLKAFCSNKET 254
P ++ AVK ++ +T G S E+R TL ++ H NI++LK
Sbjct: 27 PTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 85
Query: 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
LV++ M G L + L ++ + + E R ++ +E L L+ I+HRD+K
Sbjct: 86 FFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLK 138
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
NILL+ D + DFG + L D G E + V G+ Y+AP
Sbjct: 139 PENILLDDDMNIKLTDFGFSCQL-DPG--EKLREVCGTPSYLAP 179
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK------ETNLLV 258
G+QVA+KK+ ++ E++ L +H NI+ +K ++ +V
Sbjct: 78 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ M L +++H + L E + +GL Y+H S +IHRD+K +N+L+
Sbjct: 138 LDLM-ESDLHQIIHSSQP--LTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLV 191
Query: 319 NSDFEAHVADFGLAKYLQDTGASE--CMSAVAGSYGYIAPVL 358
N + E + DFG+A+ L + A M+ + Y AP L
Sbjct: 192 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 150 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 197
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 198 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 237
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
+ + EI L KI+H NIV L + L+ + + G L + + K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERD 117
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL---LNSDFEAHVADFGLAKYLQDTGA 340
++ + + YL HD I+HRD+K N+L L+ D + ++DFGL+K ++D G+
Sbjct: 118 ASRLIFQVLDAVKYL-HDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGS 173
Query: 341 SECMSAVAGSYGYIAP 356
+S G+ GY+AP
Sbjct: 174 --VLSTACGTPGYVAP 187
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
+ + EI L KI+H NIV L + L+ + + G L + + K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERD 117
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL---LNSDFEAHVADFGLAKYLQDTGA 340
++ + + YL HD I+HRD+K N+L L+ D + ++DFGL+K ++D G+
Sbjct: 118 ASRLIFQVLDAVKYL-HDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPGS 173
Query: 341 SECMSAVAGSYGYIAP 356
+S G+ GY+AP
Sbjct: 174 --VLSTACGTPGYVAP 187
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 106 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 153
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 154 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 193
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-------- 256
G++VA+KK+L + EI+ L ++H N+V L C K +
Sbjct: 42 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 101
Query: 257 LVYEYMPN---GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313
LV+++ + G L VL S +K M++ + GL Y+H + I+HRD+K+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIHRNK---ILHRDMKA 153
Query: 314 NNILLNSDFEAHVADFGLAK 333
N+L+ D +ADFGLA+
Sbjct: 154 ANVLITRDGVLKLADFGLAR 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-------- 256
G++VA+KK+L + EI+ L ++H N+V L C K +
Sbjct: 41 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100
Query: 257 LVYEYMPN---GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313
LV+++ + G L VL S +K M++ + GL Y+H + I+HRD+K+
Sbjct: 101 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIHRNK---ILHRDMKA 152
Query: 314 NNILLNSDFEAHVADFGLAK 333
N+L+ D +ADFGLA+
Sbjct: 153 ANVLITRDGVLKLADFGLAR 172
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + FGLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL-------- 256
G++VA+KK+L + EI+ L ++H N+V L C K +
Sbjct: 42 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIY 101
Query: 257 LVYEYMPN---GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313
LV+++ + G L VL S +K M++ + GL Y+H + I+HRD+K+
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL-----NGLYYIHRNK---ILHRDMKA 153
Query: 314 NNILLNSDFEAHVADFGLAK 333
N+L+ D +ADFGLA+
Sbjct: 154 ANVLITRDGVLKLADFGLAR 173
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIR--TLGKIR-------HRNIVRLKAFCSNKET 254
P ++ AVK ++ +T G S E+R TL ++ H NI++LK
Sbjct: 40 PTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 98
Query: 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
LV++ M G L + L ++ + + E R ++ +E L L+ I+HRD+K
Sbjct: 99 FFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLK 151
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
NILL+ D + DFG + L D G E + V G+ Y+AP
Sbjct: 152 PENILLDDDMNIKLTDFGFSCQL-DPG--EKLREVCGTPSYLAP 192
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + LV E M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 113 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 160
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 161 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 88
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 89 QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 145
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 146 KLADFGLAR 154
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L +G + N E++ + K+ H NIVRL+ F E L LV
Sbjct: 44 SGELVAIKKVL---QGKAFKN---RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 154
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 155 LDPDTAVLKLCDFGSAKQL 173
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L +G + N E++ + K+ H NIVRL+ F E L LV
Sbjct: 44 SGELVAIKKVL---QGKAFKN---RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 154
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 155 LDPDTAVLKLCDFGSAKQL 173
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 213 KLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVL 271
K++ K S+ D L E R K++H NIVRL + + LV++ + G L E +
Sbjct: 60 KIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119
Query: 272 HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVAD 328
+ F + + ++Y H + I+HR++K N+LL S + +AD
Sbjct: 120 VAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA + D SE AG+ GY++P
Sbjct: 175 FGLAIEVND---SEAWHGFAGTPGYLSP 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 213 KLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVL 271
K++ K S+ D L E R K++H NIVRL + + LV++ + G L E +
Sbjct: 37 KIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96
Query: 272 HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVAD 328
+ F + + ++Y H S I+HR++K N+LL S + +AD
Sbjct: 97 VAR--EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA + D SE AG+ GY++P
Sbjct: 152 FGLAIEVND---SEAWHGFAGTPGYLSP 176
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 80 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 134
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 135 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 190
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 191 KVADFGLARDMYD 203
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + D GLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL--KAFCSNKETNLLVYEYM 262
+G+ + K+L + + L +E+ L +++H NIVR + T +V EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 263 PNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLHH--DCSPLIIHRDVKSNNILL 318
G L V+ K +L E L++ + L H D ++HRD+K N+ L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 319 NSDFEAHVADFGLAKYL-QDTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ L DT ++ A G+ Y++P
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSFAK---AFVGTPYYMSP 185
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLG---------EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+ +G + L FL +++ +GL Y+H S IIHRD+K
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQI--------LRGLKYIH---SADIIHRDLK 152
Query: 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+N+ +N D E + D GLA++ D M+ + Y AP +L W
Sbjct: 153 PSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 213 KLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVL 271
K++ K S+ D L E R K++H NIVRL + + LV++ + G L E +
Sbjct: 36 KIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 95
Query: 272 HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVAD 328
+ F + + ++Y H S I+HR++K N+LL S + +AD
Sbjct: 96 VAR--EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLAD 150
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA + D SE AG+ GY++P
Sbjct: 151 FGLAIEVND---SEAWHGFAGTPGYLSP 175
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 217 ITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGE------V 270
I+ S +D+ E++ + I++ + + +N + ++YEYM N S+ + V
Sbjct: 81 ISIKSKYDD-FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV 139
Query: 271 LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFG 330
L F+ ++ I SY+H++ + I HRDVK +NIL++ + ++DFG
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 331 LAKYLQDTGASECMSAVAGSYGYIAP 356
++Y+ D + G+Y ++ P
Sbjct: 198 ESEYMVDKK----IKGSRGTYEFMPP 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-D 88
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 145
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 146 KLADFGLAR 154
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 81 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 135
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 136 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 191
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 192 KVADFGLARDMYD 204
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 62 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 117 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 173 KVADFGLARDMYD 185
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 61 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 115
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 116 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 171
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 172 KVADFGLARDMYD 184
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVL--HGKRGSFLKWEMRLKI 287
E+ ++ H+NIV + + LV EY+ +L E + HG L + +
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINF 116
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
+ G+ + H I+HRD+K NIL++S+ + DFG+AK L +T ++ + V
Sbjct: 117 TNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT-NHV 172
Query: 348 AGSYGYIAP 356
G+ Y +P
Sbjct: 173 LGTVQYFSP 181
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 213 KLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVL 271
K++ K S+ D L E R K++H NIVRL + + LV++ + G L E +
Sbjct: 37 KIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96
Query: 272 HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVAD 328
+ F + + ++Y H S I+HR++K N+LL S + +AD
Sbjct: 97 VAR--EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGLA + D SE AG+ GY++P
Sbjct: 152 FGLAIEVND---SEAWHGFAGTPGYLSP 176
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 62 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 117 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 173 KVADFGLARDMYD 185
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ +L +++H + + + +++ +A + L++ H + IIHRDVK NI
Sbjct: 93 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMS-AVAGSYGYIAP 356
++++ V DFG+A+ + D+G S + AV G+ Y++P
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 61 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 115
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 116 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 171
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 172 KVADFGLARDMYD 184
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ +L +++H + + + +++ +A + L++ H + IIHRDVK NI
Sbjct: 93 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMS-AVAGSYGYIAP 356
++++ V DFG+A+ + D+G S + AV G+ Y++P
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ +L +++H + + + +++ +A + L++ H + IIHRDVK NI
Sbjct: 93 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMS-AVAGSYGYIAP 356
++++ V DFG+A+ + D+G S + AV G+ Y++P
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 60 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 114
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 115 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 170
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 171 KVADFGLARDMYD 183
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 54 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 108
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 109 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 164
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 165 KVADFGLARDMYD 177
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
++ EY+ GS ++L G F ++++ + E KGL YLH + IHRD+K+ N+
Sbjct: 98 IIMEYLGGGSALDLLRA--GPFDEFQIATMLK-EILKGLDYLHSEKK---IHRDIKAANV 151
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
LL+ + +ADFG+A L DT + G+ ++AP
Sbjct: 152 LLSEQGDVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAP 189
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ +L +++H + + + +++ +A + L++ H + IIHRDVK NI
Sbjct: 93 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMS-AVAGSYGYIAP 356
++++ V DFG+A+ + D+G S + AV G+ Y++P
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 57 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 111
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 112 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 167
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 168 KVADFGLARDMYD 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 59 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 113
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ YL S +HRD+ + N +L+ F
Sbjct: 114 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 169
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 170 KVADFGLARDMYD 182
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 54 TATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW----------EMRLKIAIEAAKGLSYLHHDCSPLIIH 308
E+ G+L L KR F+ + E + + + AKG+ +L S IH
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIH 167
Query: 309 RDVKSNNILLNSDFEAHVADFGLAK 333
RD+ + NILL+ + DFGLA+
Sbjct: 168 RDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ +L +++H + + + +++ +A + L++ H + IIHRDVK NI
Sbjct: 110 IVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 164
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMS-AVAGSYGYIAP 356
++++ V DFG+A+ + D+G S + AV G+ Y++P
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
E VA+K++ + D G+ + EI L +++H+NIVRL + + LV+E+
Sbjct: 28 EIVALKRV----RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
+ L + G L E+ + KGL + H S ++HRD+K N+L+N +
Sbjct: 84 -DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNG 138
Query: 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
E +A+FGLA+ C SA + Y P
Sbjct: 139 ELKLANFGLARAF--GIPVRCYSAEVVTLWYRPP 170
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMRIADFGLAR 205
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L +G + N E++ + K+ H NIVRL+ F E L LV
Sbjct: 44 SGELVAIKKVL---QGKAFKN---RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 98 LDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 154
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 155 LDPDTAVLKLCDFGSAKQL 173
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNKETNLLVYEY 261
T G +VAVKKL + H E+R L ++H N++ L F + Y
Sbjct: 44 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ +G L+ + ++ I + +GL Y+H S IIHRD+K +N+ +N
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNE 160
Query: 321 DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
D E + D GLA++ D M+ + Y AP +L W
Sbjct: 161 DCELKILDGGLARHTDDE-----MTGYVATRWYRAPEIMLNW 197
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ + EI L KI+H NIV L+ + LV + + G L + + ++G + + +
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDA 122
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH---VADFGLAKYLQDTGA 340
I + + YLH I+HRD+K N+L S E ++DFGL+K G
Sbjct: 123 STLIR-QVLDAVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGK 175
Query: 341 SECMSAVAGSYGYIAP 356
+ MS G+ GY+AP
Sbjct: 176 GDVMSTACGTPGYVAP 191
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 230 EIRTLGKIRHRNIVRL----KAFCSNKETN------------LLVYEYMPNGSLGEVLHG 273
E++ L K+ H NIV F + ET+ + E+ G+L + +
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 274 KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
+RG L + L++ + KG+ Y+H S +I+RD+K +NI L + + DFGL
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 334 YLQDTGASECMSAVAGSYGYIAP 356
L++ G G+ Y++P
Sbjct: 171 SLKNDGKR---XRSKGTLRYMSP 190
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 70 VAVKML----KDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 62 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 117
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 118 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 174
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 175 LAARNVLVTENNVMKIADFGLAR 197
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 116 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 171
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 228
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 229 LAARNVLVTENNVMKIADFGLAR 251
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 59 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 114
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 115 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 171
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 172 LAARNVLVTENNVMKIADFGLAR 194
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 57 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 112
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 113 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 169
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 170 LTARNVLVTENNVMKIADFGLAR 192
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLSQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 275 RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334
+G + ++ KIA+ K L +LH S +IHRDVK +N+L+N+ + DFG++ Y
Sbjct: 129 KGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGY 186
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
L D A + AG Y AP
Sbjct: 187 LVDDVAKDID---AGCKPYXAP 205
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 26/136 (19%)
Query: 237 IRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHG-----KRGSFLKWEMRLKIAIEA 291
+ RN V+ K T + EY NG+L +++H +R + W + +I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY--WRLFRQIL--- 126
Query: 292 AKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT------------G 339
+ LSY+H S IIHRD+K NI ++ + DFGLAK + + G
Sbjct: 127 -EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 340 ASECMSAVAGSYGYIA 355
+S+ +++ G+ Y+A
Sbjct: 183 SSDNLTSAIGTAMYVA 198
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE-YMP 263
+GE+VA+KKL + E+ L ++H N++ L + + Y+ Y+
Sbjct: 66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
+ L G E + + KGL Y+H S ++HRD+K N+ +N D E
Sbjct: 126 MPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCE 182
Query: 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+ DFGLA++ A M+ + Y AP +L W
Sbjct: 183 LKILDFGLARH-----ADAEMTGYVVTRWYRAPEVILSW 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 27/149 (18%)
Query: 209 VAVKKLLGITKGSSH---DNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K S+H L +E++ L + H NIV L C+ L++ EY
Sbjct: 79 VAVKML----KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 265 GSLGEVLHGKRGSFLKWEMRLKI----------------AIEAAKGLSYLHHDCSPLIIH 308
G L L KR SF+ + I + + AKG+++L S IH
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 191
Query: 309 RDVKSNNILLNSDFEAHVADFGLAKYLQD 337
RD+ + NILL + DFGLA+++++
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARHIKN 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+KK+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-H 84
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 85 QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 141
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 142 KLADFGLAR 150
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
++ AVK + + + + + E+ L K+ H NI++L + + +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 267 L-GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNS---D 321
L E++ KR S +I + G++Y+H H+ I+HRD+K NILL S D
Sbjct: 108 LFDEIIKRKRFS---EHDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKD 160
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ + DFGL+ Q M G+ YIAP
Sbjct: 161 CDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAP 192
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
++ AVK + + + + + E+ L K+ H NI++L + + +V E G
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 267 L-GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNS---D 321
L E++ KR S +I + G++Y+H H+ I+HRD+K NILL S D
Sbjct: 108 LFDEIIKRKRFS---EHDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKD 160
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ + DFGL+ Q M G+ YIAP
Sbjct: 161 CDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAP 192
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 106 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 153
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 154 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 193
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK I +G D + EI +RH NIVR K +V EY G
Sbjct: 45 ELVAVKY---IERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH- 325
L E + G F + E R + G+SY H + + HRD+K N LL+
Sbjct: 102 LFERICNA-GRFSEDEARFFFQ-QLISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRL 156
Query: 326 -VADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ADFG +K S+ SAV G+ YIAP
Sbjct: 157 KIADFGYSK--ASVLHSQPKSAV-GTPAYIAP 185
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 121 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 175
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ +L S +HRD+ + N +L+ F
Sbjct: 176 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 231
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 232 KVADFGLARDMYD 244
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 54 TATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW----------EMRLKIAIEAAKGLSYLHHDCSPLIIH 308
E+ G+L L KR F+ + E + + + AKG+ +L S IH
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIH 167
Query: 309 RDVKSNNILLNSDFEAHVADFGLAK 333
RD+ + NILL+ + DFGLA+
Sbjct: 168 RDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 19/119 (15%)
Query: 245 LKAFCSNKETNLL--VYEYMPNGSLGEVLHG-----KRGSFLKWEMRLKIAIEAAKGLSY 297
++ FC+ ++ L V EYMP G L ++ K F E+ L + + GL
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL-- 195
Query: 298 LHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
IHRDVK +N+LL+ +ADFG + +TG C +AV G+ YI+P
Sbjct: 196 ---------IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISP 244
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 22/147 (14%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 56 TATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 112
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW------------EMRLKIAIEAAKGLSYLHHDCSPLI 306
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 113 VEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKX 169
Query: 307 IHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 67 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 121
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ +L S +HRD+ + N +L+ F
Sbjct: 122 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 177
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 178 KVADFGLARDMYD 190
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 217 ITKGSSHDNGLSA---EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL-GEVLH 272
I K S+ + S E+ L K+ H NI++L + + +V E G L E++
Sbjct: 55 INKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK 114
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRDVKSNNILLNS---DFEAHVAD 328
KR S +I + G++Y+H H+ I+HRD+K NILL S D + + D
Sbjct: 115 RKRFS---EHDAARIIKQVFSGITYMHKHN----IVHRDLKPENILLESKEKDCDIKIID 167
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP 356
FGL+ Q M G+ YIAP
Sbjct: 168 FGLSTCFQQNTK---MKDRIGTAYYIAP 192
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE-YMP 263
+GE+VA+KKL + E+ L ++H N++ L + + Y+ Y+
Sbjct: 48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
+ L G E + + KGL Y+H S ++HRD+K N+ +N D E
Sbjct: 108 MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCE 164
Query: 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLGW 360
+ DFGLA++ A M+ + Y AP +L W
Sbjct: 165 LKILDFGLARH-----ADAEMTGYVVTRWYRAPEVILSW 198
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 62 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ +L S +HRD+ + N +L+ F
Sbjct: 117 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 173 KVADFGLARDMYD 185
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 62 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ +L S +HRD+ + N +L+ F
Sbjct: 117 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 173 KVADFGLARDMYD 185
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+ K+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 27 TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 142
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 143 KLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+ K+ T+ + EI L ++ H NIV+L + LV+E++ +
Sbjct: 26 TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L + + + + + + +GL++ H S ++HRD+K N+L+N++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAI 141
Query: 325 HVADFGLAK 333
+ADFGLA+
Sbjct: 142 KLADFGLAR 150
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 215 LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGK 274
L + K + + EI L ++ H NI++LK LV E + G L + + +
Sbjct: 83 LKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV-E 141
Query: 275 RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVADFGL 331
+G + + + + + + ++YLH + I+HRD+K N+L + D +ADFGL
Sbjct: 142 KGYYSERDAADAVK-QILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGL 197
Query: 332 AKYLQDTGASECMSAVAGSYGYIAP 356
+K ++ M V G+ GY AP
Sbjct: 198 SKIVEH---QVLMKTVCGTPGYCAP 219
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 60 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 114
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ +L S +HRD+ + N +L+ F
Sbjct: 115 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 170
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 171 KVADFGLARDMYD 183
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 63 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 117
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ +L S +HRD+ + N +L+ F
Sbjct: 118 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 173
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 174 KVADFGLARDMYD 186
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
+VAVK +L T + L +E++ + + +H NIV L C++ L++ EY G
Sbjct: 78 KVAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 267 LGEVLHGKR------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
L L K S L L + + A+G+++L S IHRDV +
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 193
Query: 315 NILLNSDFEAHVADFGLAK 333
N+LL + A + DFGLA+
Sbjct: 194 NVLLTNGHVAKIGDFGLAR 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 227 LSAEIRTLGKIRHRNIVRL--KAFCSNKETNLLVYEYMPNGSLGEVLHG--KRGSFLKWE 282
L +E+ L +++H NIVR + T +V EY G L V+ K +L E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 283 MRLKIAIEAAKGLSYLHH--DCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL-QDTG 339
L++ + L H D ++HRD+K N+ L+ + DFGLA+ L DT
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 340 ASECMSAVAGSYGYIAP 356
++ G+ Y++P
Sbjct: 172 FAK---TFVGTPYYMSP 185
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 117 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 164
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 165 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 204
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 210 AVKKLLGITKGSSHDNGLSAEIRTLGKIR----HRNIVRLKAFCSNKE-TNLLVYEYMPN 264
AVK L IT D G ++ T G I H N++ L C E + L+V YM +
Sbjct: 63 AVKSLNRIT-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 117
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + ++ + ++ AKG+ +L S +HRD+ + N +L+ F
Sbjct: 118 GDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 173
Query: 325 HVADFGLAKYLQD 337
VADFGLA+ + D
Sbjct: 174 KVADFGLARDMLD 186
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILG 199
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 204 PNGEQVAVKKLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
P G++ A K ++ K S+ D L E R ++H NIVRL S + + LV++ +
Sbjct: 27 PTGQEYAAK-IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
G L E + + ++ + + L ++H I+HRD+K N+LL S
Sbjct: 86 TGGELFEDIVAR-----EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 323 E---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ +ADFGLA +Q G + AG+ GY++P
Sbjct: 141 KGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSP 175
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R E
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYG 111
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH S +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFC 166
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 113 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 160
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M+ + Y AP +LG
Sbjct: 161 KSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILG 200
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK I +G++ D + EI +RH NIVR K ++ EY G
Sbjct: 46 ELVAVKY---IERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGE 102
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH- 325
L E + G F + E R + G+SY H S I HRD+K N LL+
Sbjct: 103 LYERICNA-GRFSEDEARFFFQ-QLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRL 157
Query: 326 -VADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG +K S+ S V G+ YIAP
Sbjct: 158 KICDFGYSK--SSVLHSQPKSTV-GTPAYIAP 186
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 204 PNGEQVAVKKLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
P G++ A K ++ K S+ D L E R ++H NIVRL S + + LV++ +
Sbjct: 27 PTGQEYAAK-IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
G L E + + ++ + + L ++H I+HRD+K N+LL S
Sbjct: 86 TGGELFEDIVAR-----EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 323 E---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ +ADFGLA +Q G + AG+ GY++P
Sbjct: 141 KGAAVKLADFGLAIEVQ--GDQQAWFGFAGTPGYLSP 175
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAF--CSNKETNL----LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F S ++ ++ LV
Sbjct: 44 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLV 97
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 154
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 155 LDPDTAVLKLCDFGSAKQL 173
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 206 GEQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261
G +VA+K I K + + G+ E++ +++H +I+ L + + LV E
Sbjct: 36 GLEVAIKM---IDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
NG + L + F + E R + G+ YLH S I+HRD+ +N+LL +
Sbjct: 93 CHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRN 148
Query: 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVLG 359
+ADFGLA L+ E + G+ YI+P +
Sbjct: 149 MNIKIADFGLATQLK--MPHEKHYTLCGTPNYISPEIA 184
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV------RLKAFCSNKETNLL 257
P GE VA+KK+ K L EI+ L +H NI+ R +F + E +
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNIQRPDSFENFNEV-YI 91
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+ E M L V+ + S + + + A K L H + +IHRD+K +N+L
Sbjct: 92 IQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL----HGSN--VIHRDLKPSNLL 144
Query: 318 LNSDFEAHVADFGLAKYLQDTGA--SECMSAVAGSYGYIAPVLGWY 361
+NS+ + V DFGLA+ + ++ A SE +G Y+A WY
Sbjct: 145 INSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA--TRWY 188
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R E
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYG 111
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH S +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFC 166
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R E
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYG 114
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH S +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 115 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFC 169
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 170 GTPEYLAP 177
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R E
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYG 111
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH S +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 166
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 26/148 (17%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
+VAVK +L T + L +E++ + + +H NIV L C++ L++ EY G
Sbjct: 63 KVAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 267 LGEVLHGKRGSFL-------------------KWEMR--LKIAIEAAKGLSYLHHDCSPL 305
L L K + L E+R L + + A+G+++L S
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKN 178
Query: 306 IIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRDV + N+LL + A + DFGLA+
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R E
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYG 111
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH S +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 166
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
+VAVK +L T + L +E++ + + +H NIV L C++ L++ EY G
Sbjct: 78 KVAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 267 LGEVLHGKRGSFLKWEMRLKIA-------------IEAAKGLSYLHHDCSPLIIHRDVKS 313
L L ++ L+ + IA + A+G+++L S IHRDV +
Sbjct: 137 LLNFLR-RKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 192
Query: 314 NNILLNSDFEAHVADFGLAK 333
N+LL + A + DFGLA+
Sbjct: 193 RNVLLTNGHVAKIGDFGLAR 212
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 44 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 154
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 155 LDPDTAVLKLCDFGSAKQL 173
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 72 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 125
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 126 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 182
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 183 LDPDTAVLKLCDFGSAKQL 201
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 57 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 110
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 111 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 167
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 168 LDPDTAVLKLCDFGSAKQL 186
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILG 199
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 45 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 98
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 99 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 155
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 156 LDPDTAVLKLCDFGSAKQL 174
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 44 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 154
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 155 LDPDTAVLKLCDFGSAKQL 173
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 55 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 111
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW-------------EMRLKIAIEAAKGLSYLHHDCSPL 305
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 112 VEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 168
Query: 306 IIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R E
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYG 111
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH S +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 166
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 167 GTPEYLAP 174
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R E
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYG 116
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH S +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 117 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFC 171
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 172 GTPEYLAP 179
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 78 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 188
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 189 LDPDTAVLKLCDFGSAKQL 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 44 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 97
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 154
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 155 LDPDTAVLKLCDFGSAKQL 173
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 52 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 105
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 106 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 162
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 163 LDPDTAVLKLCDFGSAKQL 181
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 63 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 116
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 117 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 173
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 174 LDPDTAVLKLCDFGSAKQL 192
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 112 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 159
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M + Y AP +LG
Sbjct: 160 KSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILG 199
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 49 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 102
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 103 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 159
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 160 LDPDTAVLKLCDFGSAKQL 178
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 27/149 (18%)
Query: 209 VAVKKLLGITKGSSH---DNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K S+H L +E++ L + H NIV L C+ L++ EY
Sbjct: 56 VAVKML----KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 111
Query: 265 GSLGEVLHGKRGSFLKWEMRLKI----------------AIEAAKGLSYLHHDCSPLIIH 308
G L L KR SF+ + I + + AKG+++L S IH
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 168
Query: 309 RDVKSNNILLNSDFEAHVADFGLAKYLQD 337
RD+ + NILL + DFGLA+ +++
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKN 197
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 78 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 188
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 189 LDPDTAVLKLCDFGSAKQL 207
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 80 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 133
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 134 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 190
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 191 LDPDTAVLKLCDFGSAKQL 209
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 56 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 109
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 110 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 166
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 167 LDPDTAVLKLCDFGSAKQL 185
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 48 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 101
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 102 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 158
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 159 LDPDTAVLKLCDFGSAKQL 177
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ EY
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R ++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 123 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 176
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 177 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 233
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 234 LDPDTAVLKLCDFGSAKQL 252
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 252 KETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
K+T L ++ EY+ GS ++L + G + ++ I E KGL YLH + IHRD
Sbjct: 96 KDTKLWIIMEYLGGGSALDLL--EPGPLDETQIA-TILREILKGLDYLHSEKK---IHRD 149
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+K+ N+LL+ E +ADFG+A L DT + G+ ++AP
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAP 193
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 56 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 109
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 110 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 166
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 167 LDPDTAVLKLCDFGSAKQL 185
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-----SNKETNL-LV 258
+GE VA+KK+L + + E++ + K+ H NIVRL+ F E L LV
Sbjct: 82 SGELVAIKKVLQDKRFKNR------ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 135
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+Y+P H R + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 136 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLL 192
Query: 318 LNSDFEA-HVADFGLAKYL 335
L+ D + DFG AK L
Sbjct: 193 LDPDTAVLKLCDFGSAKQL 211
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 27/149 (18%)
Query: 209 VAVKKLLGITKGSSH---DNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K S+H L +E++ L + H NIV L C+ L++ EY
Sbjct: 72 VAVKML----KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 127
Query: 265 GSLGEVLHGKRGSFLKWEMRLKI----------------AIEAAKGLSYLHHDCSPLIIH 308
G L L KR SF+ + I + + AKG+++L S IH
Sbjct: 128 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 184
Query: 309 RDVKSNNILLNSDFEAHVADFGLAKYLQD 337
RD+ + NILL + DFGLA+ +++
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDIKN 213
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 27/149 (18%)
Query: 209 VAVKKLLGITKGSSH---DNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K S+H L +E++ L + H NIV L C+ L++ EY
Sbjct: 79 VAVKML----KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 265 GSLGEVLHGKRGSFLKWEMRLKI----------------AIEAAKGLSYLHHDCSPLIIH 308
G L L KR SF+ + I + + AKG+++L S IH
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 191
Query: 309 RDVKSNNILLNSDFEAHVADFGLAKYLQD 337
RD+ + NILL + DFGLA+ +++
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDIKN 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 27/149 (18%)
Query: 209 VAVKKLLGITKGSSH---DNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K S+H L +E++ L + H NIV L C+ L++ EY
Sbjct: 74 VAVKML----KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 129
Query: 265 GSLGEVLHGKRGSFLKWEMRLKI----------------AIEAAKGLSYLHHDCSPLIIH 308
G L L KR SF+ + I + + AKG+++L S IH
Sbjct: 130 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 186
Query: 309 RDVKSNNILLNSDFEAHVADFGLAKYLQD 337
RD+ + NILL + DFGLA+ +++
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDIKN 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRL--KAFCSNKETNLLVYEYMPNGSLGEVLHG--KRGSFLKWE 282
L +E+ L +++H NIVR + T +V EY G L V+ K +L E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 283 MRLKIAIEAAKGLSYLHH--DCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
L++ + L H D ++HRD+K N+ L+ + DFGLA+ L
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 27/163 (16%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV-RLKAFCSNK-----ETNLLVYEYM 262
VA+KKL + +H E+ + + H+NI+ L F K + +V E M
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 263 PNGSLGEV----LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ +L +V L +R S+L ++M G+ +LH S IIHRD+K +NI++
Sbjct: 114 -DANLCQVIQMELDHERMSYLLYQMLC--------GIKHLH---SAGIIHRDLKPSNIVV 161
Query: 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP--VLG 359
SD + DFGLA+ G S M + Y AP +LG
Sbjct: 162 KSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILG 201
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSA----EIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
N Q+ K + + S +G++ EI+ L ++ H NI+ L +K LV++
Sbjct: 33 NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFD 92
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+M EV+ L + +GL YLH I+HRD+K NN+LL+
Sbjct: 93 FMETDL--EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDE 147
Query: 321 DFEAHVADFGLAK 333
+ +ADFGLAK
Sbjct: 148 NGVLKLADFGLAK 160
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVYEYMP 263
+G QVAVK ++ + K + L E+ + +H N+V + K++ +E +L+ E++
Sbjct: 69 SGRQVAVK-MMDLRKQQRREL-LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLM-EFLQ 125
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAA-KGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
G+L +++ R + E ++ EA + L+YLH +IHRD+KS++ILL D
Sbjct: 126 GGALTDIVSQVRLN----EEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDG 178
Query: 323 EAHVADFG 330
++DFG
Sbjct: 179 RVKLSDFG 186
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
V V + I K + +S L ++H +V L + V +Y+ G L
Sbjct: 68 VKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELF 127
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L +R FL+ R A E A L YLH S I++RD+K NILL+S + D
Sbjct: 128 YHLQRER-CFLEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTD 182
Query: 329 FGLAKYLQDTGASECMSAVAGSYGYIAP----------VLGWYC 362
FGL K ++ + S G+ Y+AP + W+C
Sbjct: 183 FGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWC 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 39 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 96
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 97 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 147
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 148 NVLVKTPQHVKITDFGLAKLL---GAEE 172
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 252 KETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
K+T L ++ EY+ GS ++L G + ++ I E KGL YLH + IHRD
Sbjct: 76 KDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA-TILREILKGLDYLHSEKK---IHRD 129
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+K+ N+LL+ E +ADFG+A L DT + G+ ++AP
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAP 173
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 41 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 98
Query: 260 EYMPNGSLGEVLHGKR---GS--FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + GS L W ++ AKG++YL ++HRD+ +
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 150 NVLVKTPQHVKITDFGLAKLL---GAEE 174
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 42 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 99
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 100 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 150
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 151 NVLVKTPQHVKITDFGLAKLL---GAEE 175
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 54 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 167
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 39 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 96
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 97 QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 147
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 148 NVLVKTPQHVKITDFGLAKLL---GAEE 172
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 56 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 112
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 113 VEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 169
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 170 KCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVY 259
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 45 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 260 -EYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 102 TEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 54 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 167
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 91 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 204
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 205 KCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 54 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 167
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNG---LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
P+GE V + + + + ++ + E + + + RL C T LV +
Sbjct: 40 PDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTS-TVQLVTQ 98
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
MP G L + + RG ++ L ++ AKG+SYL ++HRD+ + N+L+ S
Sbjct: 99 LMPYGCLLDHVRENRGRLGSQDL-LNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKS 154
Query: 321 DFEAHVADFGLAKYL 335
+ DFGLA+ L
Sbjct: 155 PNHVKITDFGLARLL 169
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 38 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 95
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 147 NVLVKTPQHVKITDFGLAKLL---GAEE 171
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 40 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 97
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 149 NVLVKTPQHVKITDFGLAKLL---GAEE 173
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV- 258
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 45 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 259 YEYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 102 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 63 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 120
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
+ MP G L + + + + + + L ++ AKG++YL ++HRD+ + N+L+
Sbjct: 121 QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK 176
Query: 320 SDFEAHVADFGLAKYLQDTGASE 342
+ + DFGLAK L GA E
Sbjct: 177 TPQHVKITDFGLAKLL---GAEE 196
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 45 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 102
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 154 NVLVKTPQHVKITDFGLAKLL---GAEE 178
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 252 KETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
K+T L ++ EY+ GS ++L G + ++ I E KGL YLH + IHRD
Sbjct: 91 KDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA-TILREILKGLDYLHSEKK---IHRD 144
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+K+ N+LL+ E +ADFG+A L DT + G+ ++AP
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAP 188
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVY 259
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 45 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 260 -EYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 102 TEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 38 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 95
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 147 NVLVKTPQHVKITDFGLAKLL---GAEE 171
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV------RLKAFCSNKETNLL 257
P GE VA+KK+ K L EI+ L +H NI+ R +F + E +
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNIQRPDSFENFNEV-YI 91
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+ E M L V+ + S + + + A K L H + +IHRD+K +N+L
Sbjct: 92 IQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL----HGSN--VIHRDLKPSNLL 144
Query: 318 LNSDFEAHVADFGLAKYLQDTGA--SECMSAVAGSYGYIAPVLGWY 361
+NS+ + V DFGLA+ + ++ A SE +G ++A WY
Sbjct: 145 INSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA--TRWY 188
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDN--GLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVY 259
T VAVK L +G++H L +E++ L I H N+V L C+ L+V
Sbjct: 45 TATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 260 -EYMPNGSLGEVLHGKRGSFLKW--------------EMRLKIAIEAAKGLSYLHHDCSP 304
E+ G+L L KR F+ + E + + + AKG+ +L S
Sbjct: 102 TEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 158
Query: 305 LIIHRDVKSNNILLNSDFEAHVADFGLAK 333
IHRD+ + NILL+ + DFGLA+
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 252 KETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
K+T L ++ EY+ GS ++L G + ++ I E KGL YLH + IHRD
Sbjct: 76 KDTKLWIIMEYLGGGSALDLLEP--GPLDETQIA-TILREILKGLDYLHSEKK---IHRD 129
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+K+ N+LL+ E +ADFG+A L DT + G+ ++AP
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAP 173
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
GE VA+K + T GS + EI L +RH++I +L +V EY P
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPG 92
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G L + + + L E + + ++Y+H S HRD+K N+L + +
Sbjct: 93 GELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKL 147
Query: 325 HVADFGLAKYLQDTGASEC-MSAVAGSYGYIAPVL 358
+ DFGL + G + + GS Y AP L
Sbjct: 148 KLIDFGLCA--KPKGNKDYHLQTCCGSLAYAAPEL 180
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 38 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 95
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 147 NVLVKTPQHVKITDFGLAKLL---GAEE 171
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E+ L ++H NIV L +++ LV+EY+ + L + L G+ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDC-GNIINMHNVKLFLF 107
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
+ +GL+Y H ++HRD+K N+L+N E +ADFGLA+
Sbjct: 108 QLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 38 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 95
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 96 QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 147 NVLVKTPQHVKITDFGLAKLL---GAEE 171
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 44 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 101
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
+ MP G L + + + + + + L ++ AKG++YL ++HRD+ + N+L+
Sbjct: 102 QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK 157
Query: 320 SDFEAHVADFGLAKYLQDTGASE 342
+ + DFGLAK L GA E
Sbjct: 158 TPQHVKITDFGLAKLL---GAEE 177
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 41 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 98
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 150 NVLVKTPQHVKITDFGLAKLL---GAEE 174
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ Y
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 48 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 105
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 106 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 156
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 157 NVLVKTPQHVKITDFGLAKLL---GAEE 181
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 32 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 89
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 90 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 140
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 141 NVLVKTPQHVKITDFGLAKLL---GAEE 165
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 41 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 98
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 150 NVLVKTPQHVKITDFGLAKLL---GAEE 174
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 45 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 102
Query: 260 EYMPNGSLGEVLHGKR---GS--FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + GS L W ++ AKG++YL ++HRD+ +
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 154 NVLVKTPQHVKITDFGLAKLL---GAEE 178
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 41 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 98
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 99 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 150 NVLVKTPQHVKITDFGLAKLL---GAEE 174
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 40 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 97
Query: 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
+ MP G L + + + + + + L ++ AKG++YL ++HRD+ + N+L+
Sbjct: 98 QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK 153
Query: 320 SDFEAHVADFGLAKYLQDTGASE 342
+ + DFGLAK L GA E
Sbjct: 154 TPQHVKITDFGLAKLL---GAEE 173
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 45 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 102
Query: 260 EYMPNGSLGEVLHGKR---GS--FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + GS L W ++ AKG++YL ++HRD+ +
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 154 NVLVKTPQHVKITDFGLAKLL---GAEE 178
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 38 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLT-STVQLIT 95
Query: 260 EYMPNGSLGEVLHGKR---GS--FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + GS L W ++ AKG++YL ++HRD+ +
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 147 NVLVKTPQHVKITDFGLAKLL---GAEE 171
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+ E + GSLG+++ K L + L +A +GL YLH S I+H DVK++N+
Sbjct: 162 IFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVKADNV 216
Query: 317 LLNSD-FEAHVADFGLAKYLQDTGASECM---SAVAGSYGYIAP--VLGWYC 362
LL+SD A + DFG A LQ G + + + G+ ++AP VLG C
Sbjct: 217 LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E++ + + H +V L ++E +V + + G L H ++ K E
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKEETVKLFIC 122
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAG 349
E L YL + IIHRD+K +NILL+ H+ DF +A L ++ +AG
Sbjct: 123 ELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAG 176
Query: 350 SYGYIAPVL 358
+ Y+AP +
Sbjct: 177 TKPYMAPEM 185
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 26/136 (19%)
Query: 237 IRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHG-----KRGSFLKWEMRLKIAIEA 291
+ RN V+ K T + EY N +L +++H +R + W + +I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY--WRLFRQIL--- 126
Query: 292 AKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT------------G 339
+ LSY+H S IIHRD+K NI ++ + DFGLAK + + G
Sbjct: 127 -EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 340 ASECMSAVAGSYGYIA 355
+S+ +++ G+ Y+A
Sbjct: 183 SSDNLTSAIGTAMYVA 198
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 206 GEQVAVKKLLGITKGSSHDN-GLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
G++ A K ++ K S+ D+ L E R ++H NIVRL S + + L+++ +
Sbjct: 47 GQEYAAK-IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 105
Query: 265 GSLGE-VLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPL-IIHRDVKSNNILLNSDF 322
G L E ++ + S ++ +EA LH C + ++HRD+K N+LL S
Sbjct: 106 GELFEDIVAREYYSEADASHCIQQILEAV-----LH--CHQMGVVHRDLKPENLLLASKL 158
Query: 323 E---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ +ADFGLA ++ G + AG+ GY++P
Sbjct: 159 KGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSP 193
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 252 KETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
K T L ++ EY+ GS ++L K G L+ I E KGL YLH + IHRD
Sbjct: 88 KSTKLWIIMEYLGGGSALDLL--KPGP-LEETYIATILREILKGLDYLHSERK---IHRD 141
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+K+ N+LL+ + +ADFG+A L DT + G+ ++AP
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAP 185
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 46 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 160 FGLSRLM 166
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 213 KLLGITKGSSHDN-GLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGE-V 270
K++ K S+ D+ L E R ++H NIVRL S + + LV++ + G L E +
Sbjct: 35 KIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI 94
Query: 271 LHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPL-IIHRDVKSNNILLNSDFE---AHV 326
+ + S ++ +EA LH C + ++HRD+K N+LL S + +
Sbjct: 95 VAREYYSEADASHCIQQILEAV-----LH--CHQMGVVHRDLKPENLLLASKCKGAAVKL 147
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
ADFGLA +Q G + AG+ GY++P
Sbjct: 148 ADFGLAIEVQ--GDQQAWFGFAGTPGYLSP 175
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLS---AEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPN 264
VAVK L K + + LS +E+ + I +H+NI+ L C+ ++ Y
Sbjct: 70 VAVKML----KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASK 125
Query: 265 GSLGEVLHGKRGSFLKW----------EMRLKIAI----EAAKGLSYLHHDCSPLIIHRD 310
G+L E L +R +++ +M K + + A+G+ YL S IHRD
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRD 182
Query: 311 VKSNNILLNSDFEAHVADFGLAK 333
+ + N+L+ + +ADFGLA+
Sbjct: 183 LAARNVLVTENNVMKIADFGLAR 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 39 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 153 FGLSRLM 159
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 31 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 90 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 144
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 145 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 46 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 160 FGLSRLM 166
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 41 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 155 FGLSRLM 161
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 46 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 160 FGLSRLM 166
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 24/144 (16%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL---------- 256
++VA+KK++ +T S + L EI+ + ++ H NIV++ + L
Sbjct: 37 KRVAIKKIV-LTDPQSVKHALR-EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94
Query: 257 ----LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312
+V EYM L VL ++G L+ RL + +GL Y+H S ++HRD+K
Sbjct: 95 NSVYIVQEYM-ETDLANVL--EQGPLLEEHARL-FMYQLLRGLKYIH---SANVLHRDLK 147
Query: 313 SNNILLNS-DFEAHVADFGLAKYL 335
N+ +N+ D + DFGLA+ +
Sbjct: 148 PANLFINTEDLVLKIGDFGLARIM 171
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 239 HRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
H +I+ L + LV++ M G L + L ++ + + E R I + +S+L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETR-SIMRSLLEAVSFL 216
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
H + I+HRD+K NILL+ + + ++DFG + +L+ E + + G+ GY+AP
Sbjct: 217 HANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLE---PGEKLRELCGTPGYLAP 268
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 42 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 155
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 156 FGLSRLM 162
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 217 ITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRG 276
+T S + EI+T+ +RH +V L + +++YE+M G L E + +
Sbjct: 85 MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 144
Query: 277 SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF--EAHVADFGLAKY 334
+ E ++ + KGL ++H + +H D+K NI+ + E + DFGL +
Sbjct: 145 KMSEDEA-VEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAH 200
Query: 335 LQDTGASECMSAVAGSYGYIAPVLG 359
L + + G+ + AP +
Sbjct: 201 LD---PKQSVKVTTGTAEFAAPEVA 222
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 41 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 155 FGLSRLM 161
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 209 VAVKKLLGITKGSSHDNG--LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
VAVK K + DN +E + + H +IV+L +E ++ E P G
Sbjct: 55 VAVKTC---KKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGE 110
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHH-DCSPLIIHRDVKSNNILLNSDFEAH 325
LG L + S LK + +++ K ++YL +C +HRD+ NIL+ S
Sbjct: 111 LGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVK 165
Query: 326 VADFGLAKYLQD 337
+ DFGL++Y++D
Sbjct: 166 LGDFGLSRYIED 177
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK I +G D + EI +RH NIVR K +V EY G
Sbjct: 44 ELVAVKY---IERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 100
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH- 325
L E + G F + E R + G+SY H + + HRD+K N LL+
Sbjct: 101 LFERI-CNAGRFSEDEARFFFQ-QLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 155
Query: 326 -VADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG +K S+ S V G+ YIAP
Sbjct: 156 KICDFGYSK--SSVLHSQPKSTV-GTPAYIAP 184
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 41 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 155 FGLSRLM 161
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 45 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 102 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 158
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 159 FGLSRLM 165
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 33 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 209 VAVKKLLGITKGSSHDNG--LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
VAVK K + DN +E + + H +IV+L +E ++ E P G
Sbjct: 43 VAVKTC---KKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGE 98
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHH-DCSPLIIHRDVKSNNILLNSDFEAH 325
LG L + S LK + +++ K ++YL +C +HRD+ NIL+ S
Sbjct: 99 LGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVK 153
Query: 326 VADFGLAKYLQD 337
+ DFGL++Y++D
Sbjct: 154 LGDFGLSRYIED 165
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 46 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 103 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 160 FGLSRLM 166
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 138
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 46 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 159
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 160 FGLSRLM 166
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 41 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 155 FGLSRLM 161
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 209 VAVKKLLGITKGSSHDNG--LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
VAVK K + DN +E + + H +IV+L +E ++ E P G
Sbjct: 39 VAVKTC---KKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGE 94
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHH-DCSPLIIHRDVKSNNILLNSDFEAH 325
LG L + S LK + +++ K ++YL +C +HRD+ NIL+ S
Sbjct: 95 LGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVK 149
Query: 326 VADFGLAKYLQD 337
+ DFGL++Y++D
Sbjct: 150 LGDFGLSRYIED 161
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 42 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 155
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 156 FGLSRLM 162
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 138
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 41 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 155 FGLSRLM 161
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 43 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 157 FGLSRLM 163
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 135
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 136 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 41 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 154
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 155 FGLSRLM 161
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 217 ITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRG 276
+T S + EI+T+ +RH +V L + +++YE+M G L E + +
Sbjct: 191 MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 250
Query: 277 SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF--EAHVADFGLAKY 334
+ E ++ + KGL ++H + +H D+K NI+ + E + DFGL +
Sbjct: 251 KMSEDEA-VEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306
Query: 335 LQDTGASECMSAVAGSYGYIAPVLG 359
L + + G+ + AP +
Sbjct: 307 LD---PKQSVKVTTGTAEFAAPEVA 328
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 54 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 111 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 167
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 168 FGLSRLM 174
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+ E + GSLG+++ K L + L +A +GL YLH S I+H DVK++N+
Sbjct: 143 IFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVKADNV 197
Query: 317 LLNSD-FEAHVADFGLAKYLQDTGASECM---SAVAGSYGYIAP--VLGWYC 362
LL+SD A + DFG A LQ G + + + G+ ++AP VLG C
Sbjct: 198 LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK ++ + + + EI + H N+V+ L EY G
Sbjct: 32 EAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L + + G R + A G+ YLH I HRD+K N+LL+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG---ITHRDIKPENLLLDERDNLKI 145
Query: 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+DFGLA + ++ + G+ Y+AP L
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 43 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 157 FGLSRLM 163
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 39 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 153 FGLSRLM 159
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 39 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 152
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 153 FGLSRLM 159
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK L + + E + +I+H N+V+L C+ + ++ E+M G+L
Sbjct: 43 VAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
+ L + + L +A + + + YL IHRD+ + N L+ + VAD
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVAD 156
Query: 329 FGLAKYL 335
FGL++ +
Sbjct: 157 FGLSRLM 163
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 138
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339
A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 35 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 92
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ A+G++YL ++HRD+ +
Sbjct: 93 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLEDR---RLVHRDLAAR 143
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 144 NVLVKTPQHVKITDFGLAKLL---GAEE 168
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV------RLKAFCSNKETNLL 257
P GE VA+KK+ K L EI+ L +H NI+ R +F + E +
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNIQRPDSFENFNEV-YI 91
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
+ E M L V+ + S + + + A K L H + +IHRD+K +N+L
Sbjct: 92 IQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL----HGSN--VIHRDLKPSNLL 144
Query: 318 LNSDFEAHVADFGLAKYLQD--------TGASECMSAVAGSYGYIAP 356
+NS+ + V DFGLA+ + + TG M+ + Y AP
Sbjct: 145 INSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K+ H+NIVR ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMA 131
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 132 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 188
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 189 TCPGPGRVAKIGDFGMAR 206
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 157
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 158 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 214
Query: 319 NSDFEAHVA---DFGLAKYLQDTG 339
VA DFG+A+ + G
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAG 238
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 26/136 (19%)
Query: 237 IRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHG-----KRGSFLKWEMRLKIAIEA 291
+ RN V+ K T + EY N +L +++H +R + W + +I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY--WRLFRQIL--- 126
Query: 292 AKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT------------G 339
+ LSY+H S IIHR++K NI ++ + DFGLAK + + G
Sbjct: 127 -EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 340 ASECMSAVAGSYGYIA 355
+S+ +++ G+ Y+A
Sbjct: 183 SSDNLTSAIGTAXYVA 198
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 137
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 138 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 182
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 138
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K+ H+NIVR ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKLNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 174
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 175 TCPGPGRVAKIGDFGMAR 192
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R +
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYG 114
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH + + +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 115 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFC 170
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 171 GTPEYLAP 178
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 249 CSNKETNLL-VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLII 307
C E+ L V EY+ G L + H +R L E + E + L+YLH II
Sbjct: 121 CFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---II 175
Query: 308 HRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+RD+K +N+LL+S+ + D+G+ K + + S G+ YIAP
Sbjct: 176 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAP 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R +
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYG 116
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH + + +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 117 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFC 172
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 173 GTPEYLAP 180
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYG 254
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH + + +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 255 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFC 310
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 311 GTPEYLAP 318
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R +
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYG 257
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH + + +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 258 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFC 313
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 314 GTPEYLAP 321
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 224 DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM 283
++ L EI + H NI+RL + ++ L+ EY P G L + L ++ +
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQR 124
Query: 284 RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343
I E A L Y H +IHRD+K N+LL E +ADFG + + S
Sbjct: 125 TATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVH----APSLR 177
Query: 344 MSAVAGSYGYIAP 356
+ G+ Y+ P
Sbjct: 178 RKTMCGTLDYLPP 190
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 76 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 134
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 135 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 191
Query: 319 NSDFEAHVA---DFGLAKYLQDTG 339
VA DFG+A+ + G
Sbjct: 192 TCPGPGRVAKIGDFGMARDIYRAG 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N +VA+KK+ + L EI+ L + RH NI+ + + Y+
Sbjct: 67 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVT 125
Query: 265 GSLGEVLHGK-RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
+G L+ + L + + +GL Y+H S ++HRD+K +N+LLN+ +
Sbjct: 126 HLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXD 182
Query: 324 AHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ DFGLA+ D + ++ + Y AP
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 42 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 99
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 100 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 150
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFG AK L GA E
Sbjct: 151 NVLVKTPQHVKITDFGRAKLL---GAEE 175
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L RH + LK + V EY G L H R +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYG 115
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E L YLH + + +++RD+K N++L+ D + DFGL K GA+ M
Sbjct: 116 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFC 171
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 172 GTPEYLAP 179
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK +L + E + + + NIV+L C+ + L++EYM G L
Sbjct: 80 VAVK-MLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 269 EVLHG---------------KRGSF-------LKWEMRLKIAIEAAKGLSYLHHDCSPLI 306
E L R L +L IA + A G++YL
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195
Query: 307 IHRDVKSNNILLNSDFEAHVADFGLAK 333
+HRD+ + N L+ + +ADFGL++
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 40 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 97
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFG AK L GA E
Sbjct: 149 NVLVKTPQHVKITDFGRAKLL---GAEE 173
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFL--------KWEMRLKIAIEAAK 293
+VRL S + L++ E M G L L R + +++A E A
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 294 GLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 150 GMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 249 CSNKETNLL-VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLII 307
C E+ L V EY+ G L + H +R L E + E + L+YLH II
Sbjct: 78 CFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---II 132
Query: 308 HRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+RD+K +N+LL+S+ + D+G+ K + + S G+ YIAP
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 179
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFL--------KWEMRLKIAIEAAK 293
+VRL S + L++ E M G L L R + +++A E A
Sbjct: 80 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 294 GLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 140 GMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 3/146 (2%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN--LLVYEYM 262
G + VK L + + E L H N++ + C + L+ +M
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWM 91
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P GSL VLH + +K A++ A+G+++L H PLI + S +++++ D
Sbjct: 92 PYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDM 150
Query: 323 EAHVADFGLAKYLQDTGASECMSAVA 348
A ++ + Q G + VA
Sbjct: 151 TARISMADVKFSFQSPGRMYAPAWVA 176
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+ +L T ++ L E + + + ++ RL C T L+
Sbjct: 72 PEGEKVKIPVAIMELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 129
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 130 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 180
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFGLAK L GA E
Sbjct: 181 NVLVKTPQHVKITDFGLAKLL---GAEE 205
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 249 CSNKETNLL-VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLII 307
C E+ L V EY+ G L + H +R L E + E + L+YLH II
Sbjct: 74 CFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---II 128
Query: 308 HRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+RD+K +N+LL+S+ + D+G+ K + + S G+ YIAP
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 175
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 40 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIM 97
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFG AK L GA E
Sbjct: 149 NVLVKTPQHVKITDFGRAKLL---GAEE 173
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
N Q A+K L IT+ + L + G + H N++ L +L E +P+
Sbjct: 48 NRIQCAIKSLSRITEMQQVEAFLREGLLMRG-LNHPNVLALIGI-------MLPPEGLPH 99
Query: 265 GSLGEVLHGKRGSFLKWEMR-------LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
L + HG F++ R + ++ A+G+ YL +HRD+ + N +
Sbjct: 100 VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCM 156
Query: 318 LNSDFEAHVADFGLAKYLQD 337
L+ F VADFGLA+ + D
Sbjct: 157 LDESFTVKVADFGLARDILD 176
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 131
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 132 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 188
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 189 TCPGPGRVAKIGDFGMAR 206
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+ E + GSLG+++ K+ L + L +A +GL YLH + I+H DVK++N+
Sbjct: 141 IFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNV 195
Query: 317 LLNSD-FEAHVADFGLAKYLQDTGASECM---SAVAGSYGYIAP--VLGWYC 362
LL+SD A + DFG A LQ G + + + G+ ++AP V+G C
Sbjct: 196 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 51 NKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 110 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 163
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 164 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 50 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 108
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 109 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 165
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 166 TCPGPGRVAKIGDFGMAR 183
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 222 SHDNGLSAEIRTLGKIRHRNIVRL----KAFCSNKETNLLVYEYMPNGSLGEVLHGKRGS 277
S E L ++H NIVR ++ K+ +LV E +G+L L KR
Sbjct: 67 SERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL--KRFK 124
Query: 278 FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF-EAHVADFGLAKYLQ 336
K ++ + KGL +LH +P IIHRD+K +NI + + D GLA +
Sbjct: 125 VXKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183
Query: 337 DTGASECMSAVAGSYGYIAP 356
+ A AV G+ + AP
Sbjct: 184 ASFA----KAVIGTPEFXAP 199
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EYMP G L ++ KW R A E L +H S IHRDVK +N+
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVP-EKW-ARFYTA-EVVLALDAIH---SMGFIHRDVKPDNM 199
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
LL+ +ADFG + G C +AV G+ YI+P
Sbjct: 200 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 238
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 138
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 139 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+ E + GSLG+++ K+ L + L +A +GL YLH + I+H DVK++N+
Sbjct: 127 IFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNV 181
Query: 317 LLNSD-FEAHVADFGLAKYLQDTGASECM---SAVAGSYGYIAP--VLGWYC 362
LL+SD A + DFG A LQ G + + + G+ ++AP V+G C
Sbjct: 182 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 249 CSNKETNLL-VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLII 307
C E+ L V EY+ G L + H +R L E + E + L+YLH II
Sbjct: 89 CFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERG---II 143
Query: 308 HRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+RD+K +N+LL+S+ + D+G+ K + + S G+ YIAP
Sbjct: 144 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 190
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 116
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 117 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 173
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 174 TCPGPGRVAKIGDFGMAR 191
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 38 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 95
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 96 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFG AK L GA E
Sbjct: 147 NVLVKTPQHVKITDFGRAKLL---GAEE 171
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EYMP G L ++ KW R A E L +H S IHRDVK +N+
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVP-EKW-ARFYTA-EVVLALDAIH---SMGFIHRDVKPDNM 204
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
LL+ +ADFG + G C +AV G+ YI+P
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 243
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 116
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 117 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 173
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 174 TCPGPGRVAKIGDFGMAR 191
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 174
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 175 TCPGPGRVAKIGDFGMAR 192
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 248 FCS--NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPL 305
FC+ KE V EY+ G L + H + A E GL +LH S
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKG 139
Query: 306 IIHRDVKSNNILLNSDFEAHVADFGLAK--YLQDTGASECMSAVAGSYGYIAP 356
I++RD+K +NILL+ D +ADFG+ K L D +E G+ YIAP
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE----FCGTPDYIAP 188
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 129
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 130 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+ E + GSLG+++ K+ L + L +A +GL YLH + I+H DVK++N+
Sbjct: 143 IFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNV 197
Query: 317 LLNSD-FEAHVADFGLAKYLQDTGASECM---SAVAGSYGYIAP--VLGWYC 362
LL+SD A + DFG A LQ G + + + G+ ++AP V+G C
Sbjct: 198 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 75 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 133
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 134 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 190
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 191 TCPGPGRVAKIGDFGMAR 208
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 45 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 102
Query: 260 EYMPNGSLGEVLHGKR---GS--FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + GS L W ++ AKG++YL ++HRD+ +
Sbjct: 103 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFG AK L GA E
Sbjct: 154 NVLVKTPQHVKITDFGRAKLL---GAEE 178
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EYMP G L ++ KW R A E L +H S IHRDVK +N+
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVP-EKW-ARFYTA-EVVLALDAIH---SMGFIHRDVKPDNM 204
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
LL+ +ADFG + G C +AV G+ YI+P
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 243
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 204 PNGEQV----AVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259
P GE+V A+K+L T ++ L E + + + ++ RL C T L+
Sbjct: 40 PEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVCRLLGICLTS-TVQLIT 97
Query: 260 EYMPNGSLGEVLHGKRGS-----FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSN 314
+ MP G L + + + + L W ++ AKG++YL ++HRD+ +
Sbjct: 98 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASE 342
N+L+ + + DFG AK L GA E
Sbjct: 149 NVLVKTPQHVKITDFGRAKLL---GAEE 173
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 123
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 124 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 180
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 181 TCPGPGRVAKIGDFGMAR 198
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 207 EQVAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265
++VA+K + + K S + EI L +RH +I++L + ++V EY
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGE 94
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH 325
++ KR + + + I A + Y H I+HRD+K N+LL+ +
Sbjct: 95 LFDYIVEKKRMTEDEGRRFFQQIICA---IEYCHRHK---IVHRDLKPENLLLDDNLNVK 148
Query: 326 VADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ADFGL+ + D + GS Y AP
Sbjct: 149 IADFGLSNIMTD---GNFLKTSCGSPNYAAP 176
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 73 PSPLQVAVKTLPEVYSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 131
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 132 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 188
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 189 TCPGPGRVAKIGDFGMAR 206
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 174
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 175 TCPGPGRVAKIGDFGMAQ 192
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 218 TKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNL-LVYEYMPNGSLGEVLHGKR 275
TK EI L H NIV+L AF E NL ++ E+ G++ V+
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLELE 129
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ ++++ + + L+YLH + IIHRD+K+ NIL D + +ADFG++
Sbjct: 130 RPLTESQIQV-VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA-- 183
Query: 336 QDTGASECMSAVAGSYGYIAP 356
++T + + G+ ++AP
Sbjct: 184 KNTRTIQRRDSFIGTPYWMAP 204
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G+ VAVKK+ + L E+ + +H N+V + + +V E++
Sbjct: 44 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L +++ R + E + + + LS LH +IHRD+KS++ILL D
Sbjct: 102 GALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 155
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
++DFG Q + + G+ ++AP L
Sbjct: 156 KLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPEL 187
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G+ VAVKK+ + L E+ + +H N+V + + +V E++
Sbjct: 55 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 112
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L +++ R + E + + + LS LH +IHRD+KS++ILL D
Sbjct: 113 GALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 166
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
++DFG Q + + G+ ++AP L
Sbjct: 167 KLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPEL 198
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 131
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 132 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G+ VAVKK+ + L E+ + +H N+V + + +V E++
Sbjct: 48 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 105
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L +++ R + E + + + LS LH +IHRD+KS++ILL D
Sbjct: 106 GALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 159
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
++DFG Q + + G+ ++AP L
Sbjct: 160 KLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPEL 191
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 138
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 139 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 110 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 163
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 164 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E + +I+H N+V+L C+ + ++ E+M G+L + L + + L +A
Sbjct: 266 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ + + YL IHR++ + N L+ + VADFGL++ +
Sbjct: 326 QISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 368
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 81 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 135
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 136 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EYMP G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ VADFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263
P+ QVAVK L + + L E + K H+NIVR ++ E M
Sbjct: 85 PSPLQVAVKTLPEVCSEQDELDFL-MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 143
Query: 264 NGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R S L L +A + A G YL + IHRD+ + N LL
Sbjct: 144 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 200
Query: 319 NSDFEAHVA---DFGLAK 333
VA DFG+A+
Sbjct: 201 TCPGPGRVAKIGDFGMAR 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 105
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 106 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 159
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 160 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G+ VAVKK+ + L E+ + +H N+V + + +V E++
Sbjct: 53 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 110
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L +++ R + E + + + LS LH +IHRD+KS++ILL D
Sbjct: 111 GALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 164
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
++DFG Q + + G+ ++AP L
Sbjct: 165 KLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPEL 196
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 403 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 461
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 462 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 516
Query: 333 KYLQ 336
K L+
Sbjct: 517 KALR 520
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETN--LLVYEYMPNGSLGEVLHGKRGSFLKWEMR 284
+ EI+ L ++RH+N+++L N+E +V EY G + E+L E R
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVP------EKR 105
Query: 285 LKIA------IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
+ + GL YLH S I+H+D+K N+LL + ++ G+A+ L
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 339 GASECMSAVAGSYGYIAP 356
A + GS + P
Sbjct: 163 AADDTCRTSQGSPAFQPP 180
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 218 TKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNL-LVYEYMPNGSLGEVLHGKR 275
TK EI L H NIV+L AF E NL ++ E+ G++ V+
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLELE 129
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ ++++ + + L+YLH + IIHRD+K+ NIL D + +ADFG++
Sbjct: 130 RPLTESQIQV-VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA-- 183
Query: 336 QDTGASECMSAVAGSYGYIAP 356
++T + + G+ ++AP
Sbjct: 184 KNTRXIQRRDSFIGTPYWMAP 204
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 137
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 138 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EYMP G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ VADFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 90 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 144
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 145 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 126
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 127 SFLQVRKYS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 182
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 183 FGLSRYMEDS 192
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
EI L + H NI++L +K+ LV E+ G L E + R F + + I
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDA-ANIMK 153
Query: 290 EAAKGLSYLH-HDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKYLQDTGASECMS 345
+ G+ YLH H+ I+HRD+K NILL NS + DFGL+ + +
Sbjct: 154 QILSGICYLHKHN----IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---LR 206
Query: 346 AVAGSYGYIAP 356
G+ YIAP
Sbjct: 207 DRLGTAYYIAP 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 404 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 462
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 463 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 517
Query: 333 KYLQ 336
K L+
Sbjct: 518 KALR 521
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 248 FCS--NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPL 305
FC+ KE V EY+ G L + H + A E GL +LH S
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKG 138
Query: 306 IIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
I++RD+K +NILL+ D +ADFG+ K ++ + G+ YIAP
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAP 187
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E + +I+H N+V+L C+ + ++ E+M G+L + L + + L +A
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ + + YL IHR++ + N L+ + VADFGL++ +
Sbjct: 365 QISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 407
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G+ VAVKK+ + L E+ + +H N+V + + +V E++
Sbjct: 98 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L +++ R + E + + + LS LH +IHRD+KS++ILL D
Sbjct: 156 GALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 209
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
++DFG Q + + G+ ++AP L
Sbjct: 210 KLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPEL 241
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 83 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 137
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 138 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 105
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 106 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 159
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 160 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 166
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N ++ DF + DFG+ + + +T
Sbjct: 167 GEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 105
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 106 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 159
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 160 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 107
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 108 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 161
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 162 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E + +I+H N+V+L C+ + ++ E+M G+L + L + + L +A
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ + + YL IHR++ + N L+ + VADFGL++ +
Sbjct: 323 QISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 365
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 105
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 106 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 159
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 160 TXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 99 SFLQVRKYS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 155 FGLSRYMEDS 164
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 110
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 111 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 164
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 165 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 53 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 111
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 112 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 165
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 166 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 44 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 102
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 103 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 156
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 157 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 99 SFLQVRKYS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 155 FGLSRYMEDS 164
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 110 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 163
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 164 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 119
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 120 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 174
Query: 333 KYLQ 336
K L+
Sbjct: 175 KALR 178
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 119
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 120 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 174
Query: 333 KYLQ 336
K L+
Sbjct: 175 KALR 178
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGE--VLHGKRGSFLKWEMR 284
+ AEI L + H NI+++ + +V E G L E V RG L
Sbjct: 67 IEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYV 126
Query: 285 LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH----VADFGLAKYLQDTGA 340
++ + L+Y H S ++H+D+K NIL D H + DFGLA+ + +
Sbjct: 127 AELMKQMMNALAYFH---SQHVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFK---S 179
Query: 341 SECMSAVAGSYGYIAP 356
E + AG+ Y+AP
Sbjct: 180 DEHSTNAAGTALYMAP 195
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 95
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 96 SFLQVRKYS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 151
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 152 FGLSRYMEDS 161
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 99 SFLQVRKFS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 155 FGLSRYMEDS 164
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 55 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 113
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 114 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 167
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 168 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 47 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 105
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 106 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 159
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 160 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 103
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 104 SFLQVRKYS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 159
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 160 FGLSRYMEDS 169
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 103
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 104 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 157
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 158 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264
+G+ VAVKK+ + L E+ + +H N+V + + +V E++
Sbjct: 175 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
G+L +++ R + E + + + LS LH +IHRD+KS++ILL D
Sbjct: 233 GALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 286
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
++DFG Q + + G+ ++AP L
Sbjct: 287 KLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPEL 318
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 101
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 102 SFLQVRKYS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 157
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 158 FGLSRYMEDS 167
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 45 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 103
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 104 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 157
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 158 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 59 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 117
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 118 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 172
Query: 333 KYLQ 336
K L+
Sbjct: 173 KALR 176
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 103
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 104 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 158
Query: 333 KYLQ 336
K L+
Sbjct: 159 KALR 162
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 205 NGEQVAVKKLLGITKGSSHDNG---LSAEIRTLGKIRHRNIVRLKA---FCSNKETNL-L 257
GE VAVK SS D E+ +RH NI+ A + T L L
Sbjct: 59 QGENVAVKIF------SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 112
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVK 312
+ Y GSL + L + + L L+I + A GL++LH + P I HRD+K
Sbjct: 113 ITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 169
Query: 313 SNNILLNSDFEAHVADFGLA 332
S NIL+ + + +AD GLA
Sbjct: 170 SKNILVKKNGQCCIADLGLA 189
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 218 TKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNL-LVYEYMPNGSLGEVLHGKR 275
TK EI L H NIV+L AF E NL ++ E+ G++ V+
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLELE 129
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ ++++ + + L+YLH + IIHRD+K+ NIL D + +ADFG++
Sbjct: 130 RPLTESQIQV-VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA-- 183
Query: 336 QDTGASECMSAVAGSYGYIAP 356
++T + G+ ++AP
Sbjct: 184 KNTRXIQRRDXFIGTPYWMAP 204
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 67 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 125
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 126 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 179
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 180 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR-LKAFCSNKETNLLVYEYMP 263
G++VA++++ + + EI + + ++ NIV L ++ E +V EY+
Sbjct: 44 TGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLA 100
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL +V+ + + + E + L +LH S +IHRD+KS+NILL D
Sbjct: 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGS 154
Query: 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG Q T S + G+ ++AP
Sbjct: 155 VKLTDFGFCA--QITPEQSKRSTMVGTPYWMAP 185
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 103
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 104 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 158
Query: 333 KYLQ 336
K L+
Sbjct: 159 KALR 162
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG-EVLHGKRGSFLKWEMRLKIA 288
E + L K+ R +V L K+ LV M G L + H + F + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YA 292
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E GL LH + I++RD+K NILL+ ++D GLA ++ + + +
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE---GQTIKGRV 346
Query: 349 GSYGYIAP 356
G+ GY+AP
Sbjct: 347 GTVGYMAP 354
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG-EVLHGKRGSFLKWEMRLKIA 288
E + L K+ R +V L K+ LV M G L + H + F + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YA 292
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E GL LH + I++RD+K NILL+ ++D GLA ++ + + +
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE---GQTIKGRV 346
Query: 349 GSYGYIAP 356
G+ GY+AP
Sbjct: 347 GTVGYMAP 354
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 41 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 99
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 100 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 154
Query: 333 KYLQ 336
K L+
Sbjct: 155 KALR 158
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 100
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 101 SFLQVRKYS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 156
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 157 FGLSRYMEDS 166
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 51 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 109
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 110 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 164
Query: 333 KYLQ 336
K L+
Sbjct: 165 KALR 168
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 217 ITKGSSHDNGLS----AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH 272
I K ++D L AE + ++ + IVR+ C E+ +LV E G L + L
Sbjct: 39 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQ 97
Query: 273 GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
R +K + +++ + + G+ YL +HRD+ + N+LL + A ++DFGL+
Sbjct: 98 QNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 152
Query: 333 KYLQ 336
K L+
Sbjct: 153 KALR 156
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 110 DLMETDLYKLL---KCQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 163
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 164 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 218 TKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNL-LVYEYMPNGSLGEVLHGKR 275
TK EI L H NIV+L AF E NL ++ E+ G++ V+
Sbjct: 45 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLELE 102
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ ++++ + + L+YLH + IIHRD+K+ NIL D + +ADFG++
Sbjct: 103 RPLTESQIQV-VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKN 158
Query: 336 QDTGASECMSAVAGSYGYIAP 356
T S + Y ++AP
Sbjct: 159 TRTXIQRRDSFIGTPY-WMAP 178
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR-LKAFCSNKETNLLVYEYMP 263
G++VA++++ + + EI + + ++ NIV L ++ E +V EY+
Sbjct: 44 TGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLA 100
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL +V+ + + + E + L +LH S +IHRD+KS+NILL D
Sbjct: 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGS 154
Query: 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG Q T S + G+ ++AP
Sbjct: 155 VKLTDFGFCA--QITPEQSKRSEMVGTPYWMAP 185
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR-LKAFCSNKETNLLVYEYMP 263
G++VA++++ + + EI + + ++ NIV L ++ E +V EY+
Sbjct: 44 TGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL-WVVMEYLA 100
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
GSL +V+ + + + E + L +LH S +IHRD+KS+NILL D
Sbjct: 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGS 154
Query: 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG Q T S + G+ ++AP
Sbjct: 155 VKLTDFGFCA--QITPEQSKRSXMVGTPYWMAP 185
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 478
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L++S+ + D
Sbjct: 479 SFLQVRKFS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 534
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 535 FGLSRYMEDS 544
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 205 NGEQVAVKKLLGITKGSSHDNG---LSAEIRTLGKIRHRNIVRLKA---FCSNKETNL-L 257
GE VAVK SS D E+ +RH NI+ A + T L L
Sbjct: 30 QGENVAVKIF------SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVK 312
+ Y GSL + L + + L L+I + A GL++LH + P I HRD+K
Sbjct: 84 ITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 313 SNNILLNSDFEAHVADFGLA 332
S NIL+ + + +AD GLA
Sbjct: 141 SKNILVKKNGQCCIADLGLA 160
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 205 NGEQVAVKKLLGITKGSSHDNG---LSAEIRTLGKIRHRNIVRLKA---FCSNKETNL-L 257
GE VAVK SS D E+ +RH NI+ A + T L L
Sbjct: 30 QGENVAVKIF------SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVK 312
+ Y GSL + L + L L+I + A GL++LH + P I HRD+K
Sbjct: 84 ITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 313 SNNILLNSDFEAHVADFGLA 332
S NIL+ + + +AD GLA
Sbjct: 141 SKNILVKKNGQCCIADLGLA 160
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 51 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 110 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 163
Query: 321 DFEAHVADFGLAK 333
+ + DFGLA+
Sbjct: 164 TCDLKICDFGLAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 52 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 110
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 111 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 164
Query: 321 DFEAHVADFGLAK 333
+ + DFGLA+
Sbjct: 165 TCDLKICDFGLAR 177
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ GSL +V+ + + + E + L +LH S +IHRD+KS+NI
Sbjct: 95 VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNI 148
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
LL D + DFG Q T S + G+ ++AP
Sbjct: 149 LLGMDGSVKLTDFGFCA--QITPEQSKRSXMVGTPYWMAP 186
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 139
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
A G++YL+ + +HR++ + N ++ DF + DFG+ + + +T
Sbjct: 140 IADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 184
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 241 NIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGSFLKWEMRLKIAIE 290
++VRL S + L+V E M +G L L G+ L+ EM +++A E
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ-EM-IQMAAE 138
Query: 291 AAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
A G++YL+ + +HR++ + N ++ DF + DFG+ + + +T
Sbjct: 139 IADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 183
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK I +G D + EI +RH NIVR K +V EY G
Sbjct: 45 ELVAVKY---IERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH- 325
L E + G F + E R + G+SY H + + HRD+K N LL+
Sbjct: 102 LFERICNA-GRFSEDEARFFFQ-QLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 326 -VADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ FG +K S+ S V G+ YIAP
Sbjct: 157 KICAFGYSK--SSVLHSQPKSTV-GTPAYIAP 185
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA++K+ + L EI+ L + RH NI+ ++A + ++ + +
Sbjct: 51 NKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 110 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 163
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 164 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 45/172 (26%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVL--------------- 271
+ E+R + K+ H NI RL +++ LV E G L + L
Sbjct: 75 IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDV 134
Query: 272 --------------------HGKRGS--FLKWEMRLK-IAIEAAKGLSYLHHDCSPLIIH 308
HG R S F++ E + I + L YLH+ I H
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICH 191
Query: 309 RDVKSNNILL--NSDFEAHVADFGLAK--YLQDTGASECMSAVAGSYGYIAP 356
RD+K N L N FE + DFGL+K Y + G M+ AG+ ++AP
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR-------LKAFCSNKETNLL 257
GEQVA+K+ + + EI+ + K+ H N+V L+ N + LL
Sbjct: 39 TGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN-DLPLL 96
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNI 316
EY G L + L+ E ++ + + + L YLH + IIHRD+K NI
Sbjct: 97 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENI 153
Query: 317 LLNSDFEA---HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+L + + D G AK L D G E + G+ Y+AP L
Sbjct: 154 VLQPGPQRLIHKIIDLGYAKEL-DQG--ELCTEFVGTLQYLAPEL 195
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR-------LKAFCSNKETNLL 257
GEQVA+K+ + + EI+ + K+ H N+V L+ N + LL
Sbjct: 38 TGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN-DLPLL 95
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNI 316
EY G L + L+ E ++ + + + L YLH + IIHRD+K NI
Sbjct: 96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENI 152
Query: 317 LLNSDFEA---HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+L + + D G AK L D G E + G+ Y+AP L
Sbjct: 153 VLQPGPQRLIHKIIDLGYAKEL-DQG--ELCTEFVGTLQYLAPEL 194
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 247 AFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLI 306
F +N + + E M G+ E L + + + K+ + K L YL +
Sbjct: 92 TFITNTDV-FIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--V 146
Query: 307 IHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
IHRDVK +NILL+ + + DFG++ L D A + AG Y+AP
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGCAAYMAP 193
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 239 HRNIVRLKAFCSNKETNLLVYEYMP----NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKG 294
H N++R FC+ K+ ++Y+ +L E + K + L E + + + G
Sbjct: 77 HPNVIRY--FCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSG 130
Query: 295 LSYLHHDCSPLIIHRDVKSNNILL-----NSDFEAHVADFGLAKYLQDTGAS-ECMSAVA 348
L++LH S I+HRD+K +NIL+ + +A ++DFGL K L S S V
Sbjct: 131 LAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 349 GSYGYIAPVL 358
G+ G+IAP +
Sbjct: 188 GTEGWIAPEM 197
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 242 IVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR-------------LKIA 288
+VRL S + L++ E M G L L L+ EM +++A
Sbjct: 77 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-----LRPEMENNPVLAPPSLSKMIQMA 131
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338
E A G++YL+ + +HRD+ + N + DF + DFG+ + + +T
Sbjct: 132 GEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Query: 227 LSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
++ EI L ++ H NI+++ N+ LV E +G L R L +
Sbjct: 76 VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASY 134
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSA 346
I + + YL IIHRD+K NI++ DF + DFG A YL+ +
Sbjct: 135 IFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLE---RGKLFYT 188
Query: 347 VAGSYGYIAP 356
G+ Y AP
Sbjct: 189 FCGTIEYCAP 198
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
+ ++L +G S + + E+ L +IRH NI+ L NK +L+ E + G L
Sbjct: 59 IKKRRLXSSRRGVSREE-IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 117
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS----DFEA 324
+ L K L + + + G+ YLH S I H D+K NI+L +
Sbjct: 118 DFLAEKES--LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRI 172
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG+A ++ A + G+ ++AP
Sbjct: 173 KLIDFGIAHKIE---AGNEFKNIFGTPEFVAP 201
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 214 LLGITKGSSHDN-GLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGE-VL 271
++ K S+ D+ L E R ++H NIVRL S + + L+++ + G L E ++
Sbjct: 43 IINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV 102
Query: 272 HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPL-IIHRDVKSNNILLNSDFE---AHVA 327
+ S ++ +EA LH C + ++HR++K N+LL S + +A
Sbjct: 103 AREYYSEADASHCIQQILEAV-----LH--CHQMGVVHRNLKPENLLLASKLKGAAVKLA 155
Query: 328 DFGLAKYLQDTGASECMSAVAGSYGYIAP 356
DFGLA ++ G + AG+ GY++P
Sbjct: 156 DFGLA--IEVEGEQQAWFGFAGTPGYLSP 182
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E L + H +V+L + L+ +++ G L L K F + +++ +A
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA- 137
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAG 349
E A GL +LH S II+RD+K NILL+ + + DFGL+K D + + G
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID--HEKKAYSFCG 192
Query: 350 SYGYIAP 356
+ Y+AP
Sbjct: 193 TVEYMAP 199
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK I +G + EI +RH NIVR K +V EY G
Sbjct: 45 ELVAVKY---IERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH- 325
L E + G F + E R + G+SY H + + HRD+K N LL+
Sbjct: 102 LFERICNA-GRFSEDEARFFFQ-QLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 326 -VADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ DFG +K S+ S V G+ YIAP
Sbjct: 157 KICDFGYSK--SSVLHSQPKSTV-GTPAYIAP 185
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L RH NI+ ++A + ++ + +
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQ 107
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 108 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 161
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 162 TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
V EY+ G L + H ++ K + A E + GL +LH II+RD+K +N+
Sbjct: 97 FVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNV 151
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVLGWY 361
+L+S+ +ADFG+ K G + G+ YIAP + Y
Sbjct: 152 MLDSEGHIKIADFGMCKEHMMDGVT--TREFCGTPDYIAPEIIAY 194
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ VADFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 98
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L+++ + D
Sbjct: 99 SFLQVRKFS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGD 154
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 155 FGLSRYMEDS 164
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
+ ++L +G S + + E+ L +IRH NI+ L NK +L+ E + G L
Sbjct: 45 IKKRRLSSSRRGVSREE-IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 103
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS----DFEA 324
+ L K L + + + G+ YLH S I H D+K NI+L +
Sbjct: 104 DFLAEKES--LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRI 158
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVLGWY 361
+ DFG+A ++ A + G+ ++AP + Y
Sbjct: 159 KLIDFGIAHKIE---AGNEFKNIFGTPEFVAPEIVNY 192
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 84 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YA 140
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 141 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 192
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 193 GTPEYLAP 200
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN-----LLVYEYM 262
+VAVK + +E + H N++RL C + +++ +M
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 263 PNGSLGEVLHGKR----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
G L L R + + LK ++ A G+ YL + +HRD+ + N +L
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCML 180
Query: 319 NSDFEAHVADFGLAK 333
D VADFGL+K
Sbjct: 181 RDDMTVCVADFGLSK 195
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ + C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYE 260
N +VA+KK+ + L EI+ L RH NI+ ++A + ++ + +
Sbjct: 49 NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQ 107
Query: 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS 320
+ L ++L + L + + +GL Y+H S ++HRD+K +N+LLN+
Sbjct: 108 DLMETDLYKLL---KTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNT 161
Query: 321 DFEAHVADFGLAKYLQ-DTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ D + ++ + Y AP
Sbjct: 162 TSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 77 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 133
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ + C
Sbjct: 134 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC----- 185
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 186 GTPEYLAP 193
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
+ ++L +G S + + E+ L +IRH NI+ L NK +L+ E + G L
Sbjct: 38 IKKRRLSSSRRGVSREE-IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 96
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS----DFEA 324
+ L K L + + + G+ YLH S I H D+K NI+L +
Sbjct: 97 DFLAEKES--LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRI 151
Query: 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVLGWY 361
+ DFG+A ++ A + G+ ++AP + Y
Sbjct: 152 KLIDFGIAHKIE---AGNEFKNIFGTPEFVAPEIVNY 185
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 225 NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH-----GKRGSFL 279
G E + L K+ R IV L A+ +T+L + + NG G++ + +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNG--GDIRYHIYNVDEDNPGF 286
Query: 280 KWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339
+ + + GL +LH II+RD+K N+LL+ D ++D GLA L+ G
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK-AG 342
Query: 340 ASECMSAVAGSYGYIAPVL 358
++ AG+ G++AP L
Sbjct: 343 QTKT-KGYAGTPGFMAPEL 360
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VA+K T S + L E T+ + H +IV+L + ++ E G L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQ-EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELR 478
Query: 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328
L ++ S L + A + + L+YL S +HRD+ + N+L+++ + D
Sbjct: 479 SFLQVRKFS-LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGD 534
Query: 329 FGLAKYLQDT 338
FGL++Y++D+
Sbjct: 535 FGLSRYMEDS 544
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G K + + A+I + ++ + IVRL C E +LV E G L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQI--MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL 96
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L GKR + ++ + + G+ YL +HRD+ + N+LL + A ++
Sbjct: 97 HKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKIS 152
Query: 328 DFGLAKYL 335
DFGL+K L
Sbjct: 153 DFGLSKAL 160
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
E VAVK I +G D + EI +RH NIVR K +V EY G
Sbjct: 45 ELVAVKY---IERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH- 325
L E + G F + E R + G+SY H + + HRD+K N LL+
Sbjct: 102 LFERICNA-GRFSEDEARFFFQ-QLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRL 156
Query: 326 -VADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ FG +K S+ V G+ YIAP
Sbjct: 157 KICAFGYSK--SSVLHSQPKDTV-GTPAYIAP 185
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 225 NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH-----GKRGSFL 279
G E + L K+ R IV L A+ +T+L + + NG G++ + +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNG--GDIRYHIYNVDEDNPGF 286
Query: 280 KWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339
+ + + GL +LH II+RD+K N+LL+ D ++D GLA L+ G
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK-AG 342
Query: 340 ASECMSAVAGSYGYIAPVL 358
++ AG+ G++AP L
Sbjct: 343 QTKT-KGYAGTPGFMAPEL 360
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKI 287
E + L IR + + ET L L+ +Y+ G L L +R F + E+++ +
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-SQRERFTEHEVQIYV 165
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK-YLQDTGASECMSA 346
E L +LH II+RD+K NILL+S+ + DFGL+K ++ D +E
Sbjct: 166 G-EIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD--ETERAYD 219
Query: 347 VAGSYGYIAP 356
G+ Y+AP
Sbjct: 220 FCGTIEYMAP 229
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 225 NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH-----GKRGSFL 279
G E + L K+ R IV L A+ +T+L + + NG G++ + +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNG--GDIRYHIYNVDEDNPGF 286
Query: 280 KWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339
+ + + GL +LH II+RD+K N+LL+ D ++D GLA L+ G
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK-AG 342
Query: 340 ASECMSAVAGSYGYIAPVL 358
++ AG+ G++AP L
Sbjct: 343 QTKT-KGYAGTPGFMAPEL 360
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 84 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 140
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 141 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 192
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 193 GTPEYLAP 200
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 225 NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLH-----GKRGSFL 279
G E + L K+ R IV L A+ +T+L + + NG G++ + +
Sbjct: 230 QGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNG--GDIRYHIYNVDEDNPGF 286
Query: 280 KWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339
+ + + GL +LH II+RD+K N+LL+ D ++D GLA L+ G
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK-AG 342
Query: 340 ASECMSAVAGSYGYIAPVL 358
++ AG+ G++AP L
Sbjct: 343 QTKT-KGYAGTPGFMAPEL 360
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
AE L +++H IV L L+ EY+ G L L + G F++ +A
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLA 128
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E + L +LH II+RD+K NI+LN + DFGL K G
Sbjct: 129 -EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFC 182
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 183 GTIEYMAP 190
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
+V EY+ GSL +V+ + + + E + L +LH S +IHR++KS+NI
Sbjct: 95 VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDNI 148
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
LL D + DFG Q T S + G+ ++AP
Sbjct: 149 LLGMDGSVKLTDFGFCA--QITPEQSKRSTMVGTPYWMAP 186
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
T G ++A K + T+G + EI + ++ H N+++L +K +LV EY+
Sbjct: 111 TATGLKLAAKIIK--TRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL-LNSD 321
G L + + + + + + L + + +G+ ++H I+H D+K NIL +N D
Sbjct: 169 DGGELFDRIIDESYNLTELDTILFMK-QICEGIRHMHQ---MYILHLDLKPENILCVNRD 224
Query: 322 F-EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ + DFGLA+ + E + G+ ++AP
Sbjct: 225 AKQIKIIDFGLARRYK---PREKLKVNFGTPEFLAP 257
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 286 KIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMS 345
KI + K L++L + IIHRD+K +NILL+ + DFG++ L D+ A +
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---T 183
Query: 346 AVAGSYGYIAP 356
AG Y+AP
Sbjct: 184 RDAGCRPYMAP 194
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC---SNKETNL---LV 258
++VA+KK+L + + E++ + ++H N+V LKAF +K+ + LV
Sbjct: 63 ESDEVAIKKVLQDKRFKNR------ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116
Query: 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
EY+P H + + +K+ + + + L+Y+H S I HRD+K N+L
Sbjct: 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLL 173
Query: 318 LNSDFEA-HVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
L+ + DFG AK L +S + Y Y AP L
Sbjct: 174 LDPPSGVLKLIDFGSAKIL--IAGEPNVSXICSRY-YRAPEL 212
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 229 AEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
AE L +++H IV L L+ EY+ G L L + G F++ +A
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLA 128
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
E + L +LH II+RD+K NI+LN + DFGL K G
Sbjct: 129 -EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFC 182
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 183 GTIEYMAP 190
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E R L + +V+L+ + +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAA 148
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAG 349
+ YLH S +I+RD+K N+L++ V DFG AK ++ C G
Sbjct: 149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----G 200
Query: 350 SYGYIAP 356
+ Y+AP
Sbjct: 201 TPEYLAP 207
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E R L + +V+L+ + +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAA 148
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAG 349
+ YLH S +I+RD+K N+L++ V DFG AK ++ C G
Sbjct: 149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----G 200
Query: 350 SYGYIAP 356
+ Y+AP
Sbjct: 201 TPEYLAP 207
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+P G + L + G F + R A
Sbjct: 112 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YA 168
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 169 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 220
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 221 GTPEYLAP 228
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 205 NGEQVAVKK--LLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKA-FCSNKETNLLVYEY 261
+G VA+KK + + + + + EI L ++ H N+++ A F + E N+ V E
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIK-EIDLLKQLNHPNVIKYYASFIEDNELNI-VLEL 113
Query: 262 MPNGSLGEVL-HGKRGSFLKWEMRL-KIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
G L ++ H K+ L E + K ++ L ++H S ++HRD+K N+ +
Sbjct: 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFIT 170
Query: 320 SDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ + D GL ++ + + ++ G+ Y++P
Sbjct: 171 ATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSP 205
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFGLAK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
V EY+ G L + H ++ K + A E A GL +L S II+RD+K +N+
Sbjct: 419 FVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNV 473
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVLGWY 361
+L+S+ +ADFG+ K ++ G+ YIAP + Y
Sbjct: 474 MLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAY 516
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI 289
E R L + +V+L+ + +V EY+P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARF-YAA 148
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAG 349
+ YLH S +I+RD+K N+L++ V DFG AK ++ C G
Sbjct: 149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----G 200
Query: 350 SYGYIAP 356
+ Y+AP
Sbjct: 201 TPEYLAP 207
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 53 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 109
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 167 I-DFGNE--FKNIFGTPEFVAP 185
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPAFVAP 186
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK +L S L +E L ++ H ++++L CS LL+ EY GSL
Sbjct: 56 VAVK-MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 269 EVLHGKRG----------------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLI 306
L R L + A + ++G+ YL +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---L 171
Query: 307 IHRDVKSNNILLNSDFEAHVADFGLAK--YLQDT 338
+HRD+ + NIL+ + ++DFGL++ Y +D+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 53 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 109
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 167 I-DFGNE--FKNIFGTPEFVAP 185
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIV----RLKAFCSNKETNLLVYEYMP 263
+VA+KK+ + L EI+ L + RH N++ L+A ++ + + +
Sbjct: 70 RVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLM 128
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
L ++L ++ L + + +GL Y+H S ++HRD+K +N+L+N+ +
Sbjct: 129 ETDLYKLLKSQQ---LSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCD 182
Query: 324 AHVADFGLAK 333
+ DFGLA+
Sbjct: 183 LKICDFGLAR 192
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 3/146 (2%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN--LLVYEYM 262
G + VK L + + E L H N++ + C + L+ +
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWX 91
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P GSL VLH + +K A++ A+G ++L H PLI + S ++ ++ D
Sbjct: 92 PYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFL-HTLEPLIPRHALNSRSVXIDEDX 150
Query: 323 EAHVADFGLAKYLQDTGASECMSAVA 348
A ++ + Q G + VA
Sbjct: 151 TARISXADVKFSFQSPGRXYAPAWVA 176
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI 316
V EY+ G L + H ++ K + A E A GL +L S II+RD+K +N+
Sbjct: 98 FVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNV 152
Query: 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVLGWY 361
+L+S+ +ADFG+ K ++ G+ YIAP + Y
Sbjct: 153 MLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAY 195
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 209 VAVKKL-LGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSL 267
VA+K L G K + + A+I + ++ + IVRL C E +LV E G L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQI--MHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL 422
Query: 268 GEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327
+ L GKR + ++ + + G+ YL +HR++ + N+LL + A ++
Sbjct: 423 HKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKIS 478
Query: 328 DFGLAKYL 335
DFGL+K L
Sbjct: 479 DFGLSKAL 486
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 24/143 (16%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCS-----NKETNLLV 258
+G + A+K+LL + + + E+ + K+ H NIV+ FCS +E++
Sbjct: 52 SGREYALKRLL--SNEEEKNRAIIQEVCFMKKLSGHPNIVQ---FCSAASIGKEESDTGQ 106
Query: 259 YEYMPNGSLGEVLHGKRGSFLK-WEMR--------LKIAIEAAKGLSYLHHDCSPLIIHR 309
E++ L E+ G+ FLK E R LKI + + + ++H P IIHR
Sbjct: 107 AEFL---LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHR 162
Query: 310 DVKSNNILLNSDFEAHVADFGLA 332
D+K N+LL++ + DFG A
Sbjct: 163 DLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK +L S L +E L ++ H ++++L CS LL+ EY GSL
Sbjct: 56 VAVK-MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 269 EVLHGKRG----------------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLI 306
L R L + A + ++G+ YL +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKL 171
Query: 307 IHRDVKSNNILLNSDFEAHVADFGLAK--YLQDT 338
+HRD+ + NIL+ + ++DFGL++ Y +D+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFGLAK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLG 268
VAVK +L S L +E L ++ H ++++L CS LL+ EY GSL
Sbjct: 56 VAVK-MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 269 EVLHGKRG----------------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLI 306
L R L + A + ++G+ YL +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKL 171
Query: 307 IHRDVKSNNILLNSDFEAHVADFGLAK--YLQDT 338
+HRD+ + NIL+ + ++DFGL++ Y +D+
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH-RNIVRLKAFCSNKETNLLVYEYMP 263
G++ A K L +G + EI L + ++ L N +L+ EY
Sbjct: 53 TGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAA 112
Query: 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF- 322
G + + + + +++ + +G+ YLH + I+H D+K NILL+S +
Sbjct: 113 GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYP 169
Query: 323 --EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+ + DFG+++ + G + + + G+ Y+AP
Sbjct: 170 LGDIKIVDFGMSRKI---GHACELREIMGTPEYLAP 202
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 234 LGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAK 293
L ++ H IV+L + L+ +++ G L L K F + +++ +A E A
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELAL 137
Query: 294 GLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGY 353
L +LH S II+RD+K NILL+ + + DFGL+K + + + G+ Y
Sbjct: 138 ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEY 192
Query: 354 IAP 356
+AP
Sbjct: 193 MAP 195
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN----LLVYEYMPN 264
VA+KK+L + + + EI L ++ H ++V++ K+ L V + +
Sbjct: 81 VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD 140
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE 323
++ R E+ +K + G+ Y+H S I+HRD+K N L+N D
Sbjct: 141 SDFKKLF---RTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCS 194
Query: 324 AHVADFGLAK 333
V DFGLA+
Sbjct: 195 VKVCDFGLAR 204
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAPVLGWY 361
+ D G + G+ ++AP + Y
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAPEIVNY 191
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 234 LGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAK 293
L ++ H IV+L + L+ +++ G L L K F + +++ +A E A
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELAL 138
Query: 294 GLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGY 353
L +LH S II+RD+K NILL+ + + DFGL+K + + + G+ Y
Sbjct: 139 ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEY 193
Query: 354 IAP 356
+AP
Sbjct: 194 MAP 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 234 LGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAK 293
L ++ H IV+L + L+ +++ G L L K F + +++ +A E A
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-ELAL 137
Query: 294 GLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGY 353
L +LH S II+RD+K NILL+ + + DFGL+K + + + G+ Y
Sbjct: 138 ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEY 192
Query: 354 IAP 356
+AP
Sbjct: 193 MAP 195
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 218 TKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGS 277
TK EI L H IV+L + ++ E+ P G++ ++
Sbjct: 46 TKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG 105
Query: 278 FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
+ ++++ + + + L++LH S IIHRD+K+ N+L+ + + +ADFG++
Sbjct: 106 LTEPQIQV-VCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFXEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC----SNKETNLLVYE 260
+G A+K++L + + A++ L H NI+RL A+C K L+
Sbjct: 53 DGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 261 YMPNGSL-GEVLHGK-RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318
+ G+L E+ K +G+FL + L + + +GL +H + HRD+K NILL
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILL 167
Query: 319 NSDFEAHVADFG-------------LAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ + + D G A LQD A C + Y AP L
Sbjct: 168 GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC------TISYRAPEL 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 218 TKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGS 277
TK EI L H IV+L + ++ E+ P G++ ++
Sbjct: 54 TKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG 113
Query: 278 FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332
+ ++++ + + + L++LH S IIHRD+K+ N+L+ + + +ADFG++
Sbjct: 114 LTEPQIQV-VCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH-RNIVRLKAFCSN--KETNLLVYEY 261
N E+V VK L + K N + EI+ L +R NI+ L + T LV+E+
Sbjct: 61 NNEKVVVKILKPVKK-----NKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 115
Query: 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321
+ N ++ + +++R + E K L Y H S I+HRDVK +N++++ +
Sbjct: 116 VNNTDFKQLYQ----TLTDYDIRFYMY-EILKALDYCH---SMGIMHRDVKPHNVMIDHE 167
Query: 322 FEA-HVADFGLAKY 334
+ D+GLA++
Sbjct: 168 HRKLRLIDWGLAEF 181
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 219 KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF 278
+G S ++ + E+ L +I+H N++ L NK +L+ E + G L + L K
Sbjct: 54 RGVSRED-IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-- 110
Query: 279 LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNI-LLNSDF---EAHVADFGLAKY 334
L E + + G+ YLH S I H D+K NI LL+ + + DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 335 LQDTGASECMSAVAGSYGYIAP 356
+ D G + G+ ++AP
Sbjct: 168 I-DFGNE--FKNIFGTPEFVAP 186
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 242 IVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKIAIEAAKGLSYLH 299
+V+L+ F +NL +V EY P G + H +R G F + R A + YLH
Sbjct: 104 LVKLE-FSFKDNSNLYMVLEYAPGGEM--FSHLRRIGRFSEPHARF-YAAQIVLTFEYLH 159
Query: 300 HDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
S +I+RD+K N+L++ VADFG AK ++ C G+ Y+AP
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Query: 239 HRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
HRN++ L F ++ LV+E M GS+ +H KR F + E + + + A L +L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASV-VVQDVASALDFL 127
Query: 299 HHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKYLQDTGASECMS-----AVAGS 350
H+ I HRD+K NIL N + DFGL ++ G +S GS
Sbjct: 128 HNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 351 YGYIAP 356
Y+AP
Sbjct: 185 AEYMAP 190
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY P G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 112 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 168
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ + C
Sbjct: 169 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC----- 220
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 221 GTPEYLAP 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEM------RLKIAIEAAKGLSYLHHDCSPLIIHRD 310
LV +Y G L +L K L EM + IAI++ L Y +HRD
Sbjct: 151 LVMDYYVGGDLLTLL-SKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---------VHRD 200
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+K +NIL++ + +ADFG L + G + AV G+ YI+P
Sbjct: 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISP 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
Query: 208 QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN------LLVYEY 261
+VAVK L SS E + + H ++ +L +++ +
Sbjct: 53 KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPF 112
Query: 262 MPNGSLGEVLHGKR---GSF-LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
M +G L L R F L + ++ ++ A G+ YL S IHRD+ + N +
Sbjct: 113 MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCM 169
Query: 318 LNSDFEAHVADFGLAK 333
L D VADFGL++
Sbjct: 170 LAEDMTVCVADFGLSR 185
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 112 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YA 168
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 169 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 220
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 221 GTPEYLAP 228
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAPVL 358
G+ Y+AP +
Sbjct: 200 GTPEYLAPAI 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFAEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKI 287
E R L + +V+L+ F +NL +V EY+ G + H +R G F + R
Sbjct: 86 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARF-Y 141
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
A + YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 194
Query: 348 AGSYGYIAP 356
G+ Y+AP
Sbjct: 195 -GTPEYLAP 202
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 17/124 (13%)
Query: 239 HRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEM------RLKIAIEAA 292
R I +L ++ LV EY G L +L K G + EM + +AI++
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL-SKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 293 KGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYG 352
L Y +HRD+K +NILL+ +ADFG L+ G + AV G+
Sbjct: 179 HRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPD 228
Query: 353 YIAP 356
Y++P
Sbjct: 229 YLSP 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + + +L+ F +NL +V EY P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLTKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFXEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
G F + +MR A E GL ++H+ +++RD+K NILL+ ++D GLA
Sbjct: 287 GVFSEADMRF-YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 336 QDTGASECMSAVAGSYGYIAP 356
A G++GY+AP
Sbjct: 343 SKKKP----HASVGTHGYMAP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
G F + +MR A E GL ++H+ +++RD+K NILL+ ++D GLA
Sbjct: 287 GVFSEADMRF-YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 336 QDTGASECMSAVAGSYGYIAP 356
A G++GY+AP
Sbjct: 343 SKKKP----HASVGTHGYMAP 359
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 205 NGEQVAVKKLLGITKGSSHDNG-LSAEIRTLGKIR-HRNIVRLKAFCSNKETNLLVYEYM 262
NG++ AVK I K + H + E+ TL + + ++NI+ L F + LV+E +
Sbjct: 37 NGKEYAVKI---IEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKL 93
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
GS+ + H ++ ++ + A L +LH + I HRD+K NIL S
Sbjct: 94 QGGSI--LAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESPE 148
Query: 323 E---AHVADFGLAKYLQDTGA-----SECMSAVAGSYGYIAP 356
+ + DF L ++ + + ++ GS Y+AP
Sbjct: 149 KVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
G F + +MR A E GL ++H+ +++RD+K NILL+ ++D GLA
Sbjct: 287 GVFSEADMRF-YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342
Query: 336 QDTGASECMSAVAGSYGYIAP 356
A G++GY+AP
Sbjct: 343 SKKKP----HASVGTHGYMAP 359
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 276 GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
G F + +MR A E GL ++H+ +++RD+K NILL+ ++D GLA
Sbjct: 286 GVFSEADMRF-YAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 341
Query: 336 QDTGASECMSAVAGSYGYIAP 356
A G++GY+AP
Sbjct: 342 SKKKP----HASVGTHGYMAP 358
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 205 NGEQVAVKKLLGITKGSSH----DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
G+Q AVK ++ + K +S L E ++H +IV L S+ +V+E
Sbjct: 48 TGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106
Query: 261 YMPNGSLG-EVLHGKRGSFLKWEM----RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
+M L E++ F+ E ++ +EA L Y H + IIHRDVK N
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA---LRYCHDNN---IIHRDVKPEN 160
Query: 316 ILLNS---DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
+LL S + DFG+A L ++G G+ ++AP
Sbjct: 161 VLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRVGTPHFMAP 202
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKI 287
E R L + +V+L+ F +NL +V EY+ G + H +R G F + R
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF-Y 146
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
A + YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 348 AGSYGYIAP 356
G+ Y+AP
Sbjct: 200 -GTPEYLAP 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 78 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 134
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 135 AQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC----- 186
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 187 GTPEYLAP 194
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKI 287
E R L + +V+L+ F +NL +V EY+ G + H +R G F + R
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF-Y 146
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
A + YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 348 AGSYGYIAP 356
G+ Y+AP
Sbjct: 200 -GTPEYLAP 207
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N+L++ V DFG AK ++ C
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC----- 199
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 200 GTPEYLAP 207
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN----KETNLLVYEYMPN 264
VA+KK+ + + + EI L +++ I+RL K L + + +
Sbjct: 54 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD 113
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L ++ K FL E I G +++H IIHRD+K N LLN D
Sbjct: 114 SDLKKLF--KTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSV 168
Query: 325 HVADFGLAK 333
V DFGLA+
Sbjct: 169 KVCDFGLAR 177
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + + +L+ F +NL +V EY P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLTKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + + +L+ F +NL +V EY P G + L + G F + R A
Sbjct: 92 EKRILQAVNFPFLTKLE-FSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARF-YA 148
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348
+ YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 149 AQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC----- 200
Query: 349 GSYGYIAP 356
G+ Y+AP
Sbjct: 201 GTPEYLAP 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKI 287
E R L + +V+L+ F +NL +V EY+ G + H +R G F + R
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF-Y 146
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
A + YLH S +I+RD+K N+L++ V DFG AK ++ +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 348 AGSYGYIAP 356
AG+ Y+AP
Sbjct: 199 AGTPEYLAP 207
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA--IEAAKGLSYLHHDCSPLIIHRDVKSN 314
LV +Y G L +L + R I + A + LH+ +HRD+K +
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY------VHRDIKPD 204
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
N+LL+ + +ADFG + D G + AV G+ YI+P
Sbjct: 205 NVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISP 245
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA--IEAAKGLSYLHHDCSPLIIHRDVKSN 314
LV +Y G L +L + R I + A + LH+ +HRD+K +
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY------VHRDIKPD 220
Query: 315 NILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
N+LL+ + +ADFG + D G + AV G+ YI+P
Sbjct: 221 NVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISP 261
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKI 287
E R L + +V+L+ F +NL +V EY+ G + H +R G F + R
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF-Y 146
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
A + YLH S +I+RD+K N++++ V DFG AK ++ C
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 348 AGSYGYIAP 356
G+ Y+AP
Sbjct: 200 -GTPEYLAP 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 246 KAFCSNKETNLL--VYEYMPNGSLGEVLHGKRGSFLKWEMRLKI-AIEAAKGLSYLHHDC 302
+ FC + + L V E++ G L + H ++ E R + A E L +LH
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFD-EARARFYAAEIISALMFLHDKG 144
Query: 303 SPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
II+RD+K +N+LL+ + +ADFG+ K G + + G+ YIAP
Sbjct: 145 ---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAP 193
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 239 HRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
HRN++ L F ++ LV+E M GS+ +H KR F + E + + + A L +L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASV-VVQDVASALDFL 127
Query: 299 HHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKYLQDTGASECMS-----AVAGS 350
H+ I HRD+K NIL N + DF L ++ G +S GS
Sbjct: 128 HNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 351 YGYIAP 356
Y+AP
Sbjct: 185 AEYMAP 190
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 239 HRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
H NIV+L ++ LV E + G L E + K+ F + E I + +S++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASY-IMRKLVSAVSHM 122
Query: 299 HHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAK 333
H D ++HRD+K N+L N + E + DFG A+
Sbjct: 123 H-DVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 206 GEQ---VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
GEQ VA+K L +G + E +++H N+V L + + +++ Y
Sbjct: 53 GEQTQAVAIKTLKDKAEGPLREE-FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 111
Query: 263 PNGSLGEVL-----HGKRGSFLKWEMRLKIAIEA----------AKGLSYL--HHDCSPL 305
+G L E L H GS + +K A+E A G+ YL HH
Sbjct: 112 SHGDLHEFLVMRSPHSDVGSTDD-DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH----- 165
Query: 306 IIHRDVKSNNILLNSDFEAHVADFGLAK 333
++H+D+ + N+L+ ++D GL +
Sbjct: 166 VVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 206 GEQ---VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
GEQ VA+K L +G + E +++H N+V L + + +++ Y
Sbjct: 36 GEQTQAVAIKTLKDKAEGPLREE-FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 94
Query: 263 PNGSLGEVL-----HGKRGSFLKWEMRLKIAIEA----------AKGLSYL--HHDCSPL 305
+G L E L H GS + +K A+E A G+ YL HH
Sbjct: 95 SHGDLHEFLVMRSPHSDVGSTDD-DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH----- 148
Query: 306 IIHRDVKSNNILLNSDFEAHVADFGLAK 333
++H+D+ + N+L+ ++D GL +
Sbjct: 149 VVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 308 HRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP 356
HRDVK NIL+++D A++ DFG+A D ++ + V G+ Y AP
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAP 204
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 207 EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV-YEYMPNG 265
E++A+K L+ +SH ++AE++ L ++ V +C K ++++ Y+ +
Sbjct: 50 EKIALKHLIP----TSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHE 105
Query: 266 SLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH 325
S ++L+ L ++ + + K L +H I+HRDVK +N L N + +
Sbjct: 106 SFLDILNS-----LSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKY 157
Query: 326 -VADFGLAKYLQDT 338
+ DFGLA+ DT
Sbjct: 158 ALVDFGLAQGTHDT 171
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 209 VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNLLVYEYMPN 264
VA+KK+ + + + EI L +++ I+RL ++ L + + +
Sbjct: 56 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIAD 115
Query: 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324
L ++ K FL + I G ++H IIHRD+K N LLN D
Sbjct: 116 SDLKKLF--KTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSV 170
Query: 325 HVADFGLAK 333
+ DFGLA+
Sbjct: 171 KICDFGLAR 179
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 285 LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECM 344
L I I+ A+ + +LH S ++HRD+K +NI D V DFGL + + +
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 345 SAVAGSYG 352
+Y
Sbjct: 224 LTPMPAYA 231
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 277 SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
FL E + + + AKG+ +L S IHRD+ + NILL+ + DFGLA+
Sbjct: 188 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 277 SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
FL E + + + AKG+ +L S IHRD+ + NILL+ + DFGLA+
Sbjct: 186 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 18/137 (13%)
Query: 230 EIRTLGKIRHRNIVR-LKAFCSNKETNLL------VYEYMP-----NGSLGEVLHGKRGS 277
E++ L K+ H IVR A+ T L VY Y+ +L + ++G R +
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG-RCT 111
Query: 278 FLKWEMR--LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335
+ E L I ++ A+ + +LH S ++HRD+K +NI D V DFGL +
Sbjct: 112 IEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
Query: 336 QDTGASECMSAVAGSYG 352
+ + +Y
Sbjct: 169 DQDEEEQTVLTPMPAYA 185
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 238 RHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSY 297
+H NI+ LK + + +V E M G L + + R F + K + Y
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI--LRQKFFSEREASAVLFTITKTVEY 131
Query: 298 LHHDCSPLIIHRDVKSNNILLNSDF----EAHVADFGLAKYLQ 336
LH ++HRD+K +NIL + + DFG AK L+
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 277 SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
FL E + + + AKG+ +L S IHRD+ + NILL+ + DFGLA+
Sbjct: 193 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 277 SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
FL E + + + AKG+ +L S IHRD+ + NILL+ + DFGLA+
Sbjct: 195 DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 225 NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR 284
+ EI + + H NI+RL + LV E G L E + KR +
Sbjct: 51 DRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDA 108
Query: 285 LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKYLQDTGAS 341
+I + ++Y H + HRD+K N L + D + DFGLA +
Sbjct: 109 ARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---PG 162
Query: 342 ECMSAVAGSYGYIAP 356
+ M G+ Y++P
Sbjct: 163 KMMRTKVGTPYYVSP 177
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 225 NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR 284
+ EI + + H NI+RL + LV E G L E + KR +
Sbjct: 68 DRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDA 125
Query: 285 LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKYLQDTGAS 341
+I + ++Y H + HRD+K N L + D + DFGLA +
Sbjct: 126 ARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---PG 179
Query: 342 ECMSAVAGSYGYIAP 356
+ M G+ Y++P
Sbjct: 180 KMMRTKVGTPYYVSP 194
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIA 288
E R L + +V+L+ F +NL +V EY+ G + L + G F + R A
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARF-YA 147
Query: 289 IEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT-----GASEC 343
+ YLH S +I+RD+K N+L++ V DFG AK ++ G E
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA 204
Query: 344 MS-AVAGSYGYIAPVLGW 360
++ + S GY V W
Sbjct: 205 LAPEIILSKGYNKAVDWW 222
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 22/168 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLS---------AEIRTLGKIRHRNIVRLK-AFCSNKET 254
G VA+K++ N LS EIR L H NI+ L+ F +E
Sbjct: 45 EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP 104
Query: 255 NL----LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
+ LV E M L +V+H +R ++ GL LH ++HRD
Sbjct: 105 AMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY-FMYHILLGLHVLHEAG---VVHRD 159
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ NILL + + + DF LA+ +DT + V + Y AP L
Sbjct: 160 LHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRW-YRAPEL 204
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 228 SAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
S EI L + +H NI+ LK + + LV E M G L + + R F
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI--LRQKFFSEREASF 125
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE----AHVADFGLAKYLQ 336
+ K + YLH S ++HRD+K +NIL + + DFG AK L+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 230 EIRTLGKIRHRNIVRLKAFCSNKETNL-LVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKI 287
E R L + +V+L+ F +NL +V EY+ G + H +R G F + R
Sbjct: 91 EKRILQAVNFPFLVKLE-FSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF-Y 146
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAV 347
A + YLH S +I+RD+K N+L++ V DFG AK ++ +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 348 AGSYGYIAP 356
G+ Y+AP
Sbjct: 199 XGTPEYLAP 207
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 22/168 (13%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLS---------AEIRTLGKIRHRNIVRLK-AFCSNKET 254
G VA+K++ N LS EIR L H NI+ L+ F +E
Sbjct: 45 EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEP 104
Query: 255 NL----LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRD 310
+ LV E M L +V+H +R ++ GL LH ++HRD
Sbjct: 105 AMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY-FMYHILLGLHVLHEAG---VVHRD 159
Query: 311 VKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
+ NILL + + + DF LA+ +DT + V + Y AP L
Sbjct: 160 LHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRW-YRAPEL 204
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 34/177 (19%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKETNLL-VYEYM 262
G VAVK++L D L EI+ L + H N++R +CS L + +
Sbjct: 38 QGRPVAVKRMLI----DFCDIAL-MEIKLLTESDDHPNVIRY--YCSETTDRFLYIALEL 90
Query: 263 PNGSLGEVLHGKRGSFLKWEMR-----LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
N +L +++ K S +++ + + + A G+++LH S IIHRD+K NIL
Sbjct: 91 CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNIL 147
Query: 318 L--NSDFEAH-----------VADFGLAKYLQDTGASECMSAV---AGSYGYIAPVL 358
+ +S F A ++DFGL K L D+G S + + +G+ G+ AP L
Sbjct: 148 VSTSSRFTADQQTGAENLRILISDFGLCKKL-DSGQSSFRTNLNNPSGTSGWRAPEL 203
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 143
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 144 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 177
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 141
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 142 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 162
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 163 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 196
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 141
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 142 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 142
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 143 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 141
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 142 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 142
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 143 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 141
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 142 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 141
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 142 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSNK--ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NIV+L ++ +T L++EY+ N +VL+ + +++R I E K L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYP---TLTDYDIRYYI-YELLKALDYC 141
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 142 H---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 228 SAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLK 286
S EI L + +H NI+ LK + + LV E M G L + + R F
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI--LRQKFFSEREASF 125
Query: 287 IAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE----AHVADFGLAKYLQ 336
+ K + YLH S ++HRD+K +NIL + + DFG AK L+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 203 TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM 262
T E VA+K++ + E+ L +++HRNI+ LK+ + L++EY
Sbjct: 56 TVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA 115
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-SD 321
N L + + + + + + G+++ H S +HRD+K N+LL+ SD
Sbjct: 116 EN-DLKKYM--DKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSD 169
Query: 322 FEA----HVADFGLAK 333
+ DFGLA+
Sbjct: 170 ASETPVLKIGDFGLAR 185
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 208 QVAVKKLLGITKGSSHD-NGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGS 266
+VA++ L+ I + + E+ + RH N+V C + ++ +
Sbjct: 57 EVAIR-LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115
Query: 267 LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326
L V+ + L +IA E KG+ YLH + I+H+D+KS N+ ++ + +
Sbjct: 116 LYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNG-KVVI 170
Query: 327 ADFGL 331
DFGL
Sbjct: 171 TDFGL 175
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSN--KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NI+ L + T LV+E++ N ++ R + +++R + E K L Y
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----RQTLTDYDIRFYM-YEILKALDYC 147
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 148 H---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 295 LSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYI 354
L++LH S ++H DVK NI L + DFGL L GA E G Y+
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYM 223
Query: 355 APVL 358
AP L
Sbjct: 224 APEL 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 288 AIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333
+ + A+G+ +L S IHRD+ + NILL+ + + DFGLA+
Sbjct: 205 SFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 238 RHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSY 297
+H NI+ LK + + +V E G L + + R F + K + Y
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKI--LRQKFFSEREASAVLFTITKTVEY 131
Query: 298 LHHDCSPLIIHRDVKSNNILLNSDF----EAHVADFGLAKYLQ 336
LH ++HRD+K +NIL + + DFG AK L+
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 234 LGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF-LKWEMRLKIAIEAA 292
+ K+ H+++V C + N+LV E++ GSL L + + W +L++A + A
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLA 123
Query: 293 KGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS 341
+ +L + +IH +V + NILL + + + K L D G S
Sbjct: 124 AAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGIS 168
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC------SNKETNL-L 257
G VA+KK++ + + + + ++ L + H NIV+L+++ ++ L +
Sbjct: 47 TGMSVAIKKVIQDPRFRNRELQI---MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV 103
Query: 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI-EAAKGLSYLHHDCSPLIIHRDVKSNNI 316
V EY+P+ + R + +K+ + + + + LH S + HRD+K +N+
Sbjct: 104 VMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNV 162
Query: 317 LLN-SDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
L+N +D + DFG AK L SE A S Y AP L
Sbjct: 163 LVNEADGTLKLCDFGSAKKL---SPSEPNVAYICSRYYRAPEL 202
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 34/177 (19%)
Query: 205 NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKETNLL-VYEYM 262
G VAVK++L D L EI+ L + H N++R +CS L + +
Sbjct: 38 QGRPVAVKRMLI----DFCDIAL-MEIKLLTESDDHPNVIR--YYCSETTDRFLYIALEL 90
Query: 263 PNGSLGEVLHGKRGSFLKWEMR-----LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317
N +L +++ K S +++ + + + A G+++LH S IIHRD+K NIL
Sbjct: 91 CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNIL 147
Query: 318 L--NSDFEAH-----------VADFGLAKYLQDTGASEC---MSAVAGSYGYIAPVL 358
+ +S F A ++DFGL K L D+G ++ +G+ G+ AP L
Sbjct: 148 VSTSSRFTADQQTGAENLRILISDFGLCKKL-DSGQXXFRXNLNNPSGTSGWRAPEL 203
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 285 LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL-----NSDFEAHVADFGLAK 333
L IAI+ + Y+H S +I+RDVK N L+ + H+ DFGLAK
Sbjct: 100 LMIAIQLLSRMEYVH---SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 20/85 (23%)
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILL--NSDFEAH-----------VADFGLAKYLQ 336
+ A G+++LH S IIHRD+K NIL+ +S F A ++DFGL K L
Sbjct: 141 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL- 196
Query: 337 DTGASEC---MSAVAGSYGYIAPVL 358
D+G ++ +G+ G+ AP L
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPEL 221
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 241 NIVRLKAFCSN--KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NI++L + +T LV+EY+ N ++ +++ M E K L Y
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYM-----YELLKALDYC 153
Query: 299 HHDCSPLIIHRDVKSNNILLN-SDFEAHVADFGLAKYLQDTGASECMSAVAGSY 351
H S I+HRDVK +N++++ + + D+GLA++ A E VA Y
Sbjct: 154 H---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH--PAQEYNVRVASRY 202
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 20/85 (23%)
Query: 290 EAAKGLSYLHHDCSPLIIHRDVKSNNILL--NSDFEAH-----------VADFGLAKYLQ 336
+ A G+++LH S IIHRD+K NIL+ +S F A ++DFGL K L
Sbjct: 141 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL- 196
Query: 337 DTGASEC---MSAVAGSYGYIAPVL 358
D+G ++ +G+ G+ AP L
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPEL 221
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 241 NIVRLKAFCSN--KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NI++L + +T LV+EY+ N ++ +++ M E K L Y
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFYM-----YELLKALDYC 148
Query: 299 HHDCSPLIIHRDVKSNNILLN-SDFEAHVADFGLAKYLQDTGASECMSAVAGSY 351
H S I+HRDVK +N++++ + + D+GLA++ A E VA Y
Sbjct: 149 H---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH--PAQEYNVRVASRY 197
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 286 KIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
KI + +GL YLH C IIH D+K NILL+
Sbjct: 150 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILLS 181
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 286 KIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN 319
KI + +GL YLH C IIH D+K NILL+
Sbjct: 134 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILLS 165
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 4 NNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG 63
N F+ ++P E+ + LT +DLS N +S + + L L +S+N+L P+
Sbjct: 41 NQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFD 99
Query: 64 NMKSLTSADFSHNNFSGEIPE--FGQYSFFNSTSFTGNPHLC 103
+KSL N+ S +PE F S + + NP C
Sbjct: 100 GLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYC 140
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSN--KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NI+ L + T LV+E++ N ++ + +++R + E K L Y
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYM-YEILKALDYC 147
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N+L++ + + D+GLA++
Sbjct: 148 H---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEF 181
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 204 PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM- 262
PNG +V ++ +L + K SS +G ++RL + ++ +L+ E M
Sbjct: 53 PNGTRVPMEVVL-LKKVSSGFSG---------------VIRLLDWFERPDSFVLILERME 96
Query: 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322
P L + + +RG+ L+ E+ + + + + H +C ++HRD+K NIL++ +
Sbjct: 97 PVQDLFDFI-TERGA-LQEELARSFFWQVLEAVRHCH-NCG--VLHRDIKDENILIDLNR 151
Query: 323 -EAHVADFGLAKYLQDT 338
E + DFG L+DT
Sbjct: 152 GELKLIDFGSGALLKDT 168
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 285 LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL-----NSDFEAHVADFGLAK 333
L IAI+ + Y+H S +I+RDVK N L+ + H+ DFGLAK
Sbjct: 108 LMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 230 EIRTLGKIRHRNIVRL-KAFCSNKETNL-LVYEYMPNGSLGEVLHGKRGSF-------LK 280
EI L +++H N++ L K F S+ + + L+++Y + L ++ R S L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 126
Query: 281 WEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD----FEAHVADFGLAKYLQ 336
M + + G+ YLH + ++HRD+K NIL+ + +AD G A+
Sbjct: 127 RGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 337 DTGASEC-MSAVAGSYGYIAPVL 358
+ V ++ Y AP L
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPEL 206
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 285 LKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL-----NSDFEAHVADFGLAK 333
L IAI+ + Y+H +I+RDVK N L+ H+ DFGLAK
Sbjct: 103 LMIAIQLITRMEYVHTKS---LIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 205 NGEQVAVKKLLGITKGSSH----DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
G+Q AVK ++ + K +S L E ++H +IV L S+ +V+E
Sbjct: 50 TGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 108
Query: 261 YMPNGSLG-EVLHGKRGSFLKWEM----RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
+M L E++ F+ E ++ +EA L Y H + IIHRDVK +
Sbjct: 109 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA---LRYCHDNN---IIHRDVKPHC 162
Query: 316 ILLNS---DFEAHVADFGLAKYLQDTG 339
+LL S + FG+A L ++G
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGESG 189
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 205 NGEQVAVKKLLGITKGSSH----DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260
G+Q AVK ++ + K +S L E ++H +IV L S+ +V+E
Sbjct: 48 TGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106
Query: 261 YMPNGSLG-EVLHGKRGSFLKWEM----RLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315
+M L E++ F+ E ++ +EA L Y H + IIHRDVK +
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA---LRYCHDNN---IIHRDVKPHC 160
Query: 316 ILLNS---DFEAHVADFGLAKYLQDTG 339
+LL S + FG+A L ++G
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGESG 187
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 234 LGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSF-LKWEMRLKIAIEAA 292
+ K+ H+++V C + N+LV E++ GSL L + + W +L++A + A
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLA 123
Query: 293 KGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS 341
+ +L + +IH +V + NILL + + + K L D G S
Sbjct: 124 WAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGIS 168
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 250 SNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAI------EAAKGLSYLHHDCS 303
NK N+++ EY+P + LH SF++ + + + + + + ++H S
Sbjct: 109 QNKYLNVIM-EYVP-----DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---S 159
Query: 304 PLIIHRDVKSNNILLNS-DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPVL 358
I HRD+K N+L+NS D + DFG AK L SE A S Y AP L
Sbjct: 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI---PSEPSVAXICSRFYRAPEL 212
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDV 311
K L++ E M G L + + +I + + +LH S I HRDV
Sbjct: 79 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDV 135
Query: 312 KSNNILLNS---DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP-VLG 359
K N+L S D + DFG AK +T + + Y Y+AP VLG
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLG 183
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDV 311
K L++ E M G L + + +I + + +LH S I HRDV
Sbjct: 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDV 154
Query: 312 KSNNILLNS---DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAP-VLG 359
K N+L S D + DFG AK +T + + Y Y+AP VLG
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLG 202
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%)
Query: 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK 60
+ RN +GI P + L L +N + +H L LN+ NQ++ +P
Sbjct: 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG 120
Query: 61 EMGNMKSLTSADFSHNNFSGEIPEFGQYSFFNSTSFTGNPHLCGS 105
++ SLTS + + N F+ + S G CG+
Sbjct: 121 SFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 241 NIVRLKAFCSN--KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYL 298
NI+ L + T LV+E++ N ++ + +++R + E K L Y
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYM-YEILKALDYC 152
Query: 299 HHDCSPLIIHRDVKSNNILLNSDFEA-HVADFGLAKY 334
H S I+HRDVK +N++++ + + D+GLA++
Sbjct: 153 H---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,704,598
Number of Sequences: 62578
Number of extensions: 415906
Number of successful extensions: 2639
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 1094
Number of HSP's gapped (non-prelim): 1134
length of query: 362
length of database: 14,973,337
effective HSP length: 100
effective length of query: 262
effective length of database: 8,715,537
effective search space: 2283470694
effective search space used: 2283470694
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)