Query 018037
Match_columns 362
No_of_seqs 299 out of 2331
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:54:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_A PDHE1-A type I, pyruvat 100.0 5E-81 1.7E-85 616.9 36.7 326 34-362 6-333 (365)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 1.3E-72 4.6E-77 563.6 35.7 303 56-360 68-374 (407)
3 1w85_A Pyruvate dehydrogenase 100.0 1.2E-70 3.9E-75 543.7 36.8 296 56-362 38-337 (368)
4 2bfd_A 2-oxoisovalerate dehydr 100.0 1.6E-70 5.4E-75 548.2 37.5 306 55-361 48-356 (400)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 1.8E-66 6E-71 514.0 37.0 304 56-361 30-337 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 1.8E-61 6.3E-66 520.2 22.4 320 33-359 84-450 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 3.3E-60 1.1E-64 521.4 23.7 320 33-359 329-695 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 1.7E-58 5.7E-63 499.8 22.2 308 45-359 183-522 (933)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 7.3E-32 2.5E-36 282.8 18.7 233 46-299 10-291 (621)
10 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 2.3E-31 7.7E-36 279.5 11.1 232 44-297 11-294 (629)
11 1gpu_A Transketolase; transfer 99.9 9.2E-27 3.1E-31 246.3 16.5 161 157-321 103-281 (680)
12 2e6k_A Transketolase; structur 99.9 1.9E-25 6.5E-30 235.3 18.2 154 163-322 111-282 (651)
13 2r8o_A Transketolase 1, TK 1; 99.9 2.4E-24 8.3E-29 227.5 22.0 151 163-316 107-275 (669)
14 3rim_A Transketolase, TK; TPP, 99.9 2.8E-24 9.5E-29 227.2 21.1 149 164-315 127-296 (700)
15 3mos_A Transketolase, TK; thia 99.9 6.7E-24 2.3E-28 222.2 22.8 142 156-302 107-252 (616)
16 1r9j_A Transketolase; domains, 99.9 2.3E-23 8E-28 220.0 26.7 150 164-316 110-277 (673)
17 1itz_A Transketolase; calvin c 99.9 1E-23 3.6E-28 222.8 22.4 246 54-316 6-289 (675)
18 3l84_A Transketolase; TKT, str 99.9 3.3E-23 1.1E-27 217.1 24.1 198 92-300 27-250 (632)
19 2qtc_A Pyruvate dehydrogenase 99.9 2.4E-23 8.2E-28 224.7 23.1 266 44-316 58-422 (886)
20 3kom_A Transketolase; rossmann 99.9 6.2E-23 2.1E-27 216.2 20.6 148 164-314 110-275 (663)
21 3uk1_A Transketolase; structur 99.9 6.5E-23 2.2E-27 217.2 18.8 147 164-314 149-313 (711)
22 3m49_A Transketolase; alpha-be 99.9 2.6E-22 8.9E-27 212.1 22.3 149 164-315 134-300 (690)
23 4feg_A Pyruvate oxidase; carba 99.9 8.8E-23 3E-27 213.1 9.9 162 168-339 418-597 (603)
24 1v5e_A Pyruvate oxidase; oxido 99.6 4.5E-16 1.5E-20 162.0 10.6 120 167-294 410-541 (590)
25 2pan_A Glyoxylate carboligase; 99.6 5.6E-16 1.9E-20 161.9 8.7 120 167-294 439-582 (616)
26 1q6z_A BFD, BFDC, benzoylforma 99.6 9.6E-16 3.3E-20 157.2 8.1 112 170-292 401-525 (528)
27 2uz1_A Benzaldehyde lyase; thi 99.6 1.5E-15 5.3E-20 157.0 8.6 117 167-292 416-546 (563)
28 1ozh_A ALS, acetolactate synth 99.6 1.6E-15 5.4E-20 157.1 7.2 116 167-293 417-544 (566)
29 2vk8_A Pyruvate decarboxylase 99.6 1.2E-15 4.3E-20 157.6 6.1 120 167-292 410-542 (563)
30 1ybh_A Acetolactate synthase, 99.6 4E-15 1.4E-19 154.8 9.0 119 167-296 423-562 (590)
31 2iht_A Carboxyethylarginine sy 99.6 2.6E-15 9E-20 155.6 7.7 115 167-292 433-561 (573)
32 1t9b_A Acetolactate synthase, 99.6 3.7E-15 1.3E-19 157.6 8.8 118 167-295 510-640 (677)
33 2pgn_A Cyclohexane-1,2-dione h 99.6 3.6E-15 1.2E-19 155.1 8.0 119 168-297 422-552 (589)
34 2vbi_A Pyruvate decarboxylase; 99.5 5.1E-15 1.7E-19 153.2 7.8 116 167-292 406-533 (566)
35 1ovm_A Indole-3-pyruvate decar 99.5 5.8E-15 2E-19 152.1 7.3 115 167-292 405-532 (552)
36 3eya_A Pyruvate dehydrogenase 99.5 1.4E-14 4.8E-19 149.4 9.9 117 167-294 403-531 (549)
37 2wvg_A PDC, pyruvate decarboxy 99.5 8.2E-15 2.8E-19 151.6 7.8 116 167-292 410-541 (568)
38 2vbf_A Branched-chain alpha-ke 99.5 1.3E-14 4.4E-19 150.2 8.4 115 167-292 422-551 (570)
39 2nxw_A Phenyl-3-pyruvate decar 99.5 1.1E-14 3.7E-19 150.8 7.1 115 167-292 419-542 (565)
40 2c31_A Oxalyl-COA decarboxylas 99.5 3.6E-14 1.2E-18 146.8 10.7 115 167-293 423-548 (568)
41 2q28_A Oxalyl-COA decarboxylas 99.5 7.7E-14 2.6E-18 144.1 11.3 116 167-294 418-546 (564)
42 3hww_A 2-succinyl-5-enolpyruvy 99.5 3.2E-14 1.1E-18 147.0 6.2 113 167-292 414-539 (556)
43 2x7j_A 2-succinyl-5-enolpyruvy 99.4 4.4E-14 1.5E-18 147.3 4.0 112 169-292 454-580 (604)
44 3lq1_A 2-succinyl-5-enolpyruvy 99.4 3.4E-13 1.2E-17 139.9 5.4 108 173-293 439-561 (578)
45 3ahc_A Phosphoketolase, xylulo 99.4 2.9E-12 9.8E-17 137.0 12.6 135 156-294 161-322 (845)
46 2c42_A Pyruvate-ferredoxin oxi 98.9 2.3E-09 8E-14 119.7 11.0 97 192-293 953-1071(1231)
47 2pgn_A Cyclohexane-1,2-dione h 92.1 0.85 2.9E-05 46.8 11.3 104 177-290 57-164 (589)
48 1yd7_A 2-keto acid:ferredoxin 91.7 0.21 7.2E-06 49.0 6.0 111 175-297 76-192 (395)
49 1ybh_A Acetolactate synthase, 90.6 0.66 2.3E-05 47.5 8.6 105 176-290 63-171 (590)
50 4feg_A Pyruvate oxidase; carba 89.8 0.83 2.8E-05 47.0 8.6 104 177-289 64-169 (603)
51 1ozh_A ALS, acetolactate synth 89.8 0.82 2.8E-05 46.6 8.5 104 177-291 62-170 (566)
52 2iht_A Carboxyethylarginine sy 89.7 1.1 3.7E-05 45.8 9.3 105 177-291 62-171 (573)
53 2uz1_A Benzaldehyde lyase; thi 89.7 1 3.4E-05 45.9 9.0 105 177-291 55-164 (563)
54 1t9b_A Acetolactate synthase, 89.5 0.88 3E-05 47.7 8.6 102 177-289 134-240 (677)
55 3eya_A Pyruvate dehydrogenase 89.3 1.2 4.2E-05 45.1 9.4 103 177-290 55-161 (549)
56 2wvg_A PDC, pyruvate decarboxy 88.9 2.1 7.3E-05 43.4 10.8 106 176-290 54-168 (568)
57 3mos_A Transketolase, TK; thia 88.7 2.4 8.2E-05 43.9 11.1 100 176-288 368-470 (616)
58 2vbi_A Pyruvate decarboxylase; 88.3 1.9 6.5E-05 43.8 9.9 106 176-290 54-168 (566)
59 2ozl_B PDHE1-B, pyruvate dehyd 88.2 1.7 5.9E-05 41.6 9.0 99 175-289 74-184 (341)
60 1ik6_A Pyruvate dehydrogenase; 87.8 1.1 3.7E-05 43.5 7.4 97 176-287 111-218 (369)
61 2x7j_A 2-succinyl-5-enolpyruvy 87.5 1.1 3.8E-05 46.0 7.7 106 177-291 83-198 (604)
62 2o1x_A 1-deoxy-D-xylulose-5-ph 87.3 0.98 3.3E-05 46.9 7.1 100 176-288 377-478 (629)
63 1itz_A Transketolase; calvin c 86.7 3.9 0.00013 42.8 11.3 100 177-288 428-531 (675)
64 1v5e_A Pyruvate oxidase; oxido 86.5 1.3 4.5E-05 45.3 7.6 103 177-289 57-162 (590)
65 1qs0_B 2-oxoisovalerate dehydr 86.0 2.2 7.6E-05 40.5 8.4 100 174-288 63-173 (338)
66 2o1s_A 1-deoxy-D-xylulose-5-ph 85.9 3.1 0.00011 43.0 10.0 101 176-288 374-476 (621)
67 2nxw_A Phenyl-3-pyruvate decar 85.8 2 7E-05 43.6 8.5 106 177-290 73-185 (565)
68 2r8o_A Transketolase 1, TK 1; 85.8 4 0.00014 42.7 10.8 106 170-287 408-517 (669)
69 1q6z_A BFD, BFDC, benzoylforma 85.6 1.7 5.9E-05 43.7 7.8 106 176-291 51-161 (528)
70 2c31_A Oxalyl-COA decarboxylas 85.4 1.6 5.5E-05 44.4 7.5 104 177-290 61-170 (568)
71 2q28_A Oxalyl-COA decarboxylas 85.3 1.6 5.5E-05 44.3 7.4 104 177-290 59-168 (564)
72 3kom_A Transketolase; rossmann 85.2 4.8 0.00017 42.1 11.1 107 169-287 408-518 (663)
73 2pan_A Glyoxylate carboligase; 85.1 2.5 8.5E-05 43.5 8.8 105 177-290 79-187 (616)
74 3uk1_A Transketolase; structur 85.0 4.2 0.00014 42.9 10.6 106 169-287 453-562 (711)
75 3lq1_A 2-succinyl-5-enolpyruvy 84.9 3.5 0.00012 42.0 9.7 106 178-290 64-177 (578)
76 1umd_B E1-beta, 2-OXO acid deh 83.4 5.8 0.0002 37.3 10.0 96 176-287 64-171 (324)
77 1w85_B Pyruvate dehydrogenase 83.4 5.7 0.0002 37.4 9.9 97 175-287 62-170 (324)
78 2e6k_A Transketolase; structur 82.7 5.5 0.00019 41.5 10.2 101 176-288 410-513 (651)
79 3l84_A Transketolase; TKT, str 81.8 5.9 0.0002 41.2 10.0 107 169-288 387-497 (632)
80 1gpu_A Transketolase; transfer 81.6 5.6 0.00019 41.6 9.8 107 169-287 414-525 (680)
81 2c42_A Pyruvate-ferredoxin oxi 80.0 7.4 0.00025 43.6 10.6 108 176-297 67-178 (1231)
82 1r9j_A Transketolase; domains, 79.8 7.4 0.00025 40.7 10.0 99 177-287 416-517 (673)
83 2bfd_B 2-oxoisovalerate dehydr 79.3 5.5 0.00019 38.0 8.2 99 175-288 79-189 (342)
84 3rim_A Transketolase, TK; TPP, 77.9 11 0.00037 39.7 10.6 107 169-287 437-549 (700)
85 3m49_A Transketolase; alpha-be 76.6 12 0.00043 39.1 10.6 108 168-287 431-542 (690)
86 2vk8_A Pyruvate decarboxylase 76.4 6.3 0.00022 39.8 8.1 105 177-290 56-169 (563)
87 3hww_A 2-succinyl-5-enolpyruvy 73.6 15 0.00053 37.0 10.2 104 177-290 60-170 (556)
88 2vbf_A Branched-chain alpha-ke 72.9 11 0.00038 38.1 8.9 105 176-290 76-189 (570)
89 1ovm_A Indole-3-pyruvate decar 70.3 4.8 0.00016 40.6 5.5 105 176-290 56-169 (552)
90 2zzd_B Thiocyanate hydrolase s 58.3 14 0.00048 31.5 5.2 32 321-352 113-144 (157)
91 1use_A VAsp, vasodilator-stimu 47.3 26 0.00088 23.5 4.0 17 309-327 7-23 (45)
92 4hhu_A OR280; engineered prote 43.4 1.1E+02 0.0037 24.8 7.9 33 252-284 82-115 (170)
93 3hbm_A UDP-sugar hydrolase; PS 43.3 54 0.0019 30.1 7.2 34 196-230 3-38 (282)
94 1is1_A Ribosome recycling fact 41.6 43 0.0015 29.2 5.8 40 318-358 133-172 (185)
95 1wqg_A Ribosome recycling fact 41.6 43 0.0015 29.2 5.8 40 318-358 133-172 (185)
96 1dd5_A Ribosome recycling fact 40.7 41 0.0014 29.3 5.5 40 318-358 133-172 (185)
97 1ise_A Ribosome recycling fact 40.4 41 0.0014 29.3 5.5 40 318-358 133-172 (185)
98 2jgd_A 2-oxoglutarate dehydrog 36.9 1.3E+02 0.0046 32.5 9.9 102 176-286 665-775 (933)
99 1eh1_A Ribosome recycling fact 36.5 42 0.0014 29.3 4.9 40 318-358 134-173 (185)
100 3lf9_A 4E10_D0_1IS1A_001_C (T1 35.3 52 0.0018 26.7 4.8 40 318-358 61-100 (121)
101 3hyn_A Putative signal transdu 31.9 38 0.0013 29.6 3.8 36 193-229 81-118 (189)
102 1m3s_A Hypothetical protein YC 31.6 1.1E+02 0.0037 25.3 6.7 39 190-230 78-116 (186)
103 2kl8_A OR15; structural genomi 31.0 61 0.0021 23.4 4.1 28 257-284 5-33 (85)
104 2yic_A 2-oxoglutarate decarbox 30.3 2.1E+02 0.0073 30.7 10.1 101 176-286 597-707 (868)
105 3iz6_A 40S ribosomal protein S 28.9 1.6E+02 0.0056 27.5 7.8 22 209-230 134-155 (305)
106 3ibs_A Conserved hypothetical 28.9 62 0.0021 27.4 4.8 37 192-228 111-147 (218)
107 4hhu_A OR280; engineered prote 27.6 64 0.0022 26.2 4.1 32 253-284 2-34 (170)
108 3m3h_A OPRT, oprtase, orotate 26.8 2.8E+02 0.0094 24.6 8.8 141 176-344 70-221 (234)
109 2xzm_B RPS0E; ribosome, transl 26.8 1.3E+02 0.0045 27.2 6.6 21 210-230 127-147 (241)
110 2xt6_A 2-oxoglutarate decarbox 26.4 2.5E+02 0.0085 31.1 9.9 103 175-287 841-953 (1113)
111 4gfq_A Ribosome-recycling fact 26.3 1.1E+02 0.0037 27.2 5.8 40 318-358 157-196 (209)
112 3lhp_S 4E10_D0_1ISEA_004_N (T9 24.5 63 0.0021 26.3 3.6 40 318-358 71-110 (123)
113 3etn_A Putative phosphosugar i 24.4 1.3E+02 0.0045 26.0 6.1 39 190-230 105-145 (220)
114 3hht_B NitrIle hydratase beta 24.3 76 0.0026 28.6 4.5 30 311-346 73-102 (229)
115 2x5n_A SPRPN10, 26S proteasome 23.7 92 0.0032 26.6 4.9 34 193-226 108-141 (192)
116 2khz_A C-MYC-responsive protei 23.3 90 0.0031 26.1 4.6 35 193-230 79-113 (165)
117 1jeo_A MJ1247, hypothetical pr 23.1 1.1E+02 0.0039 25.0 5.3 40 190-231 81-120 (180)
118 2xhz_A KDSD, YRBH, arabinose 5 22.9 1E+02 0.0036 25.3 5.0 40 190-231 95-134 (183)
119 3qyh_A CO-type nitrIle hydrata 22.8 1.1E+02 0.0037 27.4 5.0 28 322-349 41-68 (226)
120 1ugp_A NitrIle hydratase alpha 22.3 1.3E+02 0.0044 26.4 5.3 29 321-349 20-48 (203)
121 2p1h_A APAF-1, apoptotic prote 21.4 53 0.0018 24.6 2.5 25 321-345 24-48 (94)
122 2wns_A Orotate phosphoribosylt 20.9 3.3E+02 0.011 23.2 8.0 24 321-344 171-194 (205)
123 1ugp_B NitrIle hydratase beta 20.8 1E+02 0.0034 27.7 4.5 32 310-347 68-99 (226)
124 3fxa_A SIS domain protein; str 20.7 1.1E+02 0.0037 25.8 4.7 39 190-230 91-129 (201)
125 1ge9_A Ribosome recycling fact 20.4 98 0.0033 26.8 4.3 36 318-357 135-170 (184)
126 3lqv_P Splicing factor 3B subu 20.2 1.2E+02 0.0042 19.5 3.6 19 324-342 12-31 (39)
127 1tk9_A Phosphoheptose isomeras 20.1 1.1E+02 0.0037 25.3 4.5 40 189-230 108-147 (188)
No 1
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=5e-81 Score=616.86 Aligned_cols=326 Identities=54% Similarity=0.948 Sum_probs=311.7
Q ss_pred CcceeeeCCCCcccccccC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCC
Q 018037 34 TTPLTIETSVPFTSHQCEA-PSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT 112 (362)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~ 112 (362)
+++.||+++ ||+.|+++. |+..+.+|+|+++++|+.|+++|+||+++..+|++|+|.||+|++.||||+++|++.+|+
T Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~e~l~~~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~ 84 (365)
T 2ozl_A 6 ANDATFEIK-KCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 84 (365)
T ss_dssp CSEEEEECC-CCEEESCSCCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSC
T ss_pred ccccccccC-ccccccCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhC
Confidence 445788876 999999986 777889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEcCchhHHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCccCCccCCCCcccCCccccchhHHHHHHHHHHhhCCCC
Q 018037 113 KKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDE 192 (362)
Q Consensus 113 ~~D~v~~~yR~h~~~l~rG~~~~~~lael~g~~~g~~~Grggs~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~ 192 (362)
++|+|+++||+|++++++|+++.++|+|++|+.+|+++|+||+||+++. ++++++|+||+++|+|+|+|+|.++++++
T Consensus 85 ~~D~i~~~yR~~~~~~~~G~~~~~i~~e~~g~~~g~~~g~gg~~H~~~~--~~~~~~g~~G~~lp~A~G~A~A~~~~~~~ 162 (365)
T 2ozl_A 85 PTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGKD 162 (365)
T ss_dssp TTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCBT--TBCCCCCSTTTHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEehHHHHHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCCCCcCcc--ccCCCcchhhhhhHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999764 88999999999999999999999999999
Q ss_pred CeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccccccccccCCchHhhhcCCcceEEEeCCCHHHHHHHHH
Q 018037 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACK 272 (362)
Q Consensus 193 ~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~t~~~~~~~~~~~~~~g~gi~g~~VdG~D~~av~~a~~ 272 (362)
++|||++|||++++|.++|+||+|++|+||+||||+||+||++++..+....++|+++++|+|+++|||+|+++|+++++
T Consensus 163 ~~vv~~~GDGa~~~G~~~Ealn~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~ra~g~p~~~VdG~D~~av~~a~~ 242 (365)
T 2ozl_A 163 EVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATR 242 (365)
T ss_dssp CCEEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGGTTTTSCEEEEETTCHHHHHHHHH
T ss_pred ceEEEEECchhhhccHHHHHHHHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHHHhCCCCEEEEeCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877777778999999999999999999999999999
Q ss_pred HHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCCCChhhHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 018037 273 FAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVD 351 (362)
Q Consensus 273 ~A~~~ar~-~gP~lIe~~tyR~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~ 351 (362)
+|++++|+ +||+|||+.|||++|||++||+.+||+++|+++|++.+|||.+|+++|+++|+||++++++|+++++++|+
T Consensus 243 ~A~~~~r~~~gP~lIe~~t~R~~gHs~~D~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 322 (365)
T 2ozl_A 243 FAAAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIE 322 (365)
T ss_dssp HHHHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEeecCCCCCCCCCCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999988899999999998668999999999999999999999999999999999
Q ss_pred HHHHHHHhCCC
Q 018037 352 DAIAKAKEGRQ 362 (362)
Q Consensus 352 ~a~~~A~~~p~ 362 (362)
+++++|+++|.
T Consensus 323 ~a~~~a~~~p~ 333 (365)
T 2ozl_A 323 DAAQFATADPE 333 (365)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHhCCC
Confidence 99999999873
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=1.3e-72 Score=563.65 Aligned_cols=303 Identities=27% Similarity=0.388 Sum_probs=290.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCCCCCEEEcCchhHHHHHHcCCCHH
Q 018037 56 SVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLL 135 (362)
Q Consensus 56 ~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~~~D~v~~~yR~h~~~l~rG~~~~ 135 (362)
.+.+++|+++++|+.|+++|.||+++..+|++|++ +|+|++.||||+++|++.+|+++|+|+++||+|++.|++|+++.
T Consensus 68 ~~~~~~e~~~~~y~~M~~~R~fe~~~~~~~~qgr~-~~~~~~~GqEA~~vg~~~al~~~D~v~~~yR~~~~~l~~g~~~~ 146 (407)
T 1qs0_A 68 AEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKM-SFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLV 146 (407)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-ccCcCCCChHHHHHHHHHhcCCCCEEEecccchHHHHhcCCCHH
Confidence 36899999999999999999999999999999999 59999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCccCCccCCCCcccCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHH
Q 018037 136 EVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNI 215 (362)
Q Consensus 136 ~~lael~g~~~g~~~Grggs~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~ 215 (362)
++|+|++|+.++.++|+|+++|++..+.++++++|+||+++|+|+|+|+|.|++++++++||++|||++++|.+||+||+
T Consensus 147 ~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~ 226 (407)
T 1qs0_A 147 EMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTF 226 (407)
T ss_dssp HHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHhCCCCEEEEEECCchhhcChHHHHHHH
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCeEEEEEcCCccccccccccc-CCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018037 216 AALWDLPAILVCENNHYGMGTAEWRAA-KSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (362)
Q Consensus 216 A~~~~LPvIfVv~NN~~gi~t~~~~~~-~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ty 291 (362)
|++|+||+||||+||+|+++++..+.. ..++|+++ +||+++++|||+|+++|++++++|++++|+ +||+|||+.||
T Consensus 227 A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~ 306 (407)
T 1qs0_A 227 AHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTY 306 (407)
T ss_dssp HHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECC
T ss_pred HHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 999999999999999999998877665 46788775 599999999999999999999999999998 99999999999
Q ss_pred cCCCCCCCCCCCCCCChhhHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhC
Q 018037 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKEG 360 (362)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~~~ 360 (362)
|++|||++|+++.||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++++++|++.
T Consensus 307 R~~Ghs~~Dd~~~Yr~~~e~~~~~-~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~ 374 (407)
T 1qs0_A 307 RAGPHSTSDDPSKYRPADDWSHFP-LGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQY 374 (407)
T ss_dssp CCSCSSTTCCGGGTSCTTHHHHCT-TCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCcCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999888999999999998 59999999999999999999999999999999999999999983
No 3
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=1.2e-70 Score=543.75 Aligned_cols=296 Identities=29% Similarity=0.472 Sum_probs=276.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCCCCCEEEcCchhHHHHHHcCCCHH
Q 018037 56 SVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLL 135 (362)
Q Consensus 56 ~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~~~D~v~~~yR~h~~~l~rG~~~~ 135 (362)
.+.+|+++++++|+.|+++|+||+++.+++++|++ ||+|++.||||+++|++.+|+++|+|+++||+|++++++|.++.
T Consensus 38 ~~~l~~e~l~~~y~~M~~~R~fe~~~~~~~~qgr~-g~~~~~~G~Ea~~vg~~~~l~~~D~v~~~~R~~~~~~~~G~~~~ 116 (368)
T 1w85_A 38 MPELSDEQLKELMRRMVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPLY 116 (368)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCCTTCHHHHHHHHHTCCTTCEEECCSSCHHHHHHTTCCHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCCHHHHHHHHHHhcCCcCEEEecchhHHHHHhcCCCHH
Confidence 46799999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCccCCccCCCCcccCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHH
Q 018037 136 EVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNI 215 (362)
Q Consensus 136 ~~lael~g~~~g~~~Grggs~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~ 215 (362)
.+|+|++|+.+ |++|| ++.++.+++|+||+++|+|+|+|+|.++.+++++|||++|||++++|.++|+||+
T Consensus 117 ~~~~el~G~~~------G~~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~~~~~~vv~i~GDGa~~~G~~~Eal~~ 187 (368)
T 1w85_A 117 QAFLFSRGHFH------GNQIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINF 187 (368)
T ss_dssp HHHHHHHTCGG------GGCCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHTTCSCCEEEEEETGGGGSHHHHHHHHH
T ss_pred HHHHHHCCCCC------CCCCC---cccccCCCccccCccccHHHHHHHHhHhhCCCCeEEEEEchhhhhhcHHHHHHHH
Confidence 99999999875 45677 4668999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCeEEEEEcCCcccccccccccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEec
Q 018037 216 AALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYR 292 (362)
Q Consensus 216 A~~~~LPvIfVv~NN~~gi~t~~~~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR 292 (362)
|+.|+||+||||+||+|+++++.......+++.++ +||+++++|||+|+++|++++++|++++|+ +||+|||+.|||
T Consensus 188 A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~r 267 (368)
T 1w85_A 188 AGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFR 267 (368)
T ss_dssp HHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCC
T ss_pred HHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeec
Confidence 99999999999999999999988777667788875 499999999999999999999999999998 899999999999
Q ss_pred CCCCC-CCCCCCCCCChhhHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 018037 293 YHGHS-MSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKEGRQ 362 (362)
Q Consensus 293 ~~GHs-~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~~~p~ 362 (362)
++||| ++|+++.||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++++++|+++|.
T Consensus 268 ~~gHs~~~Ddp~~yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~ 337 (368)
T 1w85_A 268 YGPHTMSGDDPTRYRSKELENEWA-KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPK 337 (368)
T ss_dssp SSCSCSSCC------CHHHHHHHH-TTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred cCCCCCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999 999888999999999998 4999999999999999999999999999999999999999999873
No 4
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=1.6e-70 Score=548.17 Aligned_cols=306 Identities=25% Similarity=0.394 Sum_probs=273.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCCCCCEEEcCchhHHHHHHcCCCH
Q 018037 55 RSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTL 134 (362)
Q Consensus 55 ~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~~~D~v~~~yR~h~~~l~rG~~~ 134 (362)
..+.+++|+++++|+.|+++|.||+++..++++|+|+ |+|++.||||+++|+..+|+++|+|+++||+|++++++|+++
T Consensus 48 ~~~~~~~e~~~~~y~~M~~~r~fe~~~~~~~~~gri~-~~~~~~GqEa~~vg~~~al~~~D~v~~~yR~~~~~~~~G~~~ 126 (400)
T 2bfd_A 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPL 126 (400)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSS-CCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-eeecCCChHHHHHHHHHhcCCCCEEEecCcCHHHHHHcCCCH
Confidence 3468999999999999999999999999999999995 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCccCCccCCCCcccCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHH
Q 018037 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (362)
Q Consensus 135 ~~~lael~g~~~g~~~Grggs~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn 214 (362)
.++|++++|+.+++++|+++++|++.++.++++++|+||+++|+|+|+|+|.++.+++++|||++|||++++|.+||+||
T Consensus 127 ~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~~~~~~~~vv~~~GDGa~~~G~~~Eal~ 206 (400)
T 2bfd_A 127 ELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFN 206 (400)
T ss_dssp HHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCCcCCcccccCccccCccccccccHHHHHHHhhhhhCCCCeEEEEECchhhhcChHHHHHH
Confidence 99999999999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEcCCcccccccccccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018037 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (362)
Q Consensus 215 ~A~~~~LPvIfVv~NN~~gi~t~~~~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ty 291 (362)
+|+.|+||+||||+||+|+++++.......++++++ +||+++++|||+|+++|++++++|++++|+ ++|+|||+.||
T Consensus 207 ~A~~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~ty 286 (400)
T 2bfd_A 207 FAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 (400)
T ss_dssp HHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHHHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEee
Confidence 999999999999999999999988777767888875 499999999999999999999999999998 99999999999
Q ss_pred cCCCCCCCCCCCCCCChhhHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 018037 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKEGR 361 (362)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~~~p 361 (362)
|++|||++|+++.||+++|++.|++.+|||.+|+++|++.|+||++++++|+++++++|++++++|++.|
T Consensus 287 R~~gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~ 356 (400)
T 2bfd_A 287 RIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKP 356 (400)
T ss_dssp CCC--CC-------------------CCHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred eeCCCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999998888999999999985568999999999999999999999999999999999999998776
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=1.8e-66 Score=514.00 Aligned_cols=304 Identities=28% Similarity=0.469 Sum_probs=291.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCCCC-CEEEcCchhHHHHHHcCCCH
Q 018037 56 SVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKK-DSIITAYRDHCTFLGRGGTL 134 (362)
Q Consensus 56 ~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~~~-D~v~~~yR~h~~~l~rG~~~ 134 (362)
.+.+|+++++++|+.|+++|.||+++..++++|++ ||+|++.|||++++|+..+|+++ |+++++||+|++.+.+|.++
T Consensus 30 ~~~l~~~~l~~l~~~m~~~R~~~~~~~~~~~~G~~-g~~~~~~G~ea~~~~~~~~l~~~rD~i~~s~r~~~~~~~~G~~~ 108 (367)
T 1umd_A 30 PLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPL 108 (367)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-SCCCCCTTCHHHHHHHHHHSCTTTSEEECCTTTHHHHHHHTCCH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-cCCCCCcCHHHHHHHHHHHcCCCCcEEEeCcHHHHHHHHcCCCH
Confidence 46799999999999999999999999999999998 89999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCccCCccCCCCcccCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHH
Q 018037 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (362)
Q Consensus 135 ~~~lael~g~~~g~~~Grggs~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn 214 (362)
.++|++++|+.+|++.|+++++|+++++.++++++|++|+++|.|+|+|+|.|+.+++++|||++|||++++|.++|+||
T Consensus 109 ~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~~~~~~vv~i~GDGa~~~G~~~Eal~ 188 (367)
T 1umd_A 109 KELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGIN 188 (367)
T ss_dssp HHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHhCCCCeEEEEEcccccccCcHHHHHH
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEcCCcccccccccccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018037 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (362)
Q Consensus 215 ~A~~~~LPvIfVv~NN~~gi~t~~~~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ty 291 (362)
+|+.|++|+||||+||+|+++++.......++|..+ +||+++++|||+|+++|++++++|++++++ +||+|||+.||
T Consensus 189 ~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~A~~~a~~~~gP~lIe~~t~ 268 (367)
T 1umd_A 189 FAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVY 268 (367)
T ss_dssp HHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECC
T ss_pred HHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 999999999999999999999887766666788875 499999999999999999999999999998 99999999999
Q ss_pred cCCCCCCCCCCCCCCChhhHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 018037 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKEGR 361 (362)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~~~p 361 (362)
|.+|||++|+++.||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++++++|+++|
T Consensus 269 r~~Ghs~~D~~~~Yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~ 337 (367)
T 1umd_A 269 RYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAG 337 (367)
T ss_dssp CCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCCCCccccCCHHHHHHHH-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999888999999999998 499999999999999999999999999999999999999999887
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.8e-61 Score=520.17 Aligned_cols=320 Identities=20% Similarity=0.228 Sum_probs=276.9
Q ss_pred CCcceeeeCCC-------CcccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHH
Q 018037 33 DTTPLTIETSV-------PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAI 105 (362)
Q Consensus 33 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~v 105 (362)
.|.++-+|.-- +|.++++|.+. +.+|+|+++++|+.|+++|.||+++..+|++|++.|+ .|||++++
T Consensus 84 yc~~ig~e~~~i~~~~~~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~R~fE~~l~~~~~~~k~~g~----~G~Ea~~~ 157 (868)
T 2yic_A 84 YCRHVGVEYTHILEPEQQRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIP 157 (868)
T ss_dssp HSSSEEEECTTCSCHHHHHHHHHHHSSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHH
T ss_pred hcCCCCcceeccCChHHhHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHH
Confidence 47777777421 48999999754 7899999999999999999999999999999888764 99999999
Q ss_pred HHHhc------CCCCCEEEc-CchhHHHHHH--cCCCHHHHHHHHhCCCCCC-CCC-CCCccCCccCC------------
Q 018037 106 GMEAG------ITKKDSIIT-AYRDHCTFLG--RGGTLLEVFSELMGRKDGC-SHG-KGGSMHFYKKD------------ 162 (362)
Q Consensus 106 g~~~~------l~~~D~v~~-~yR~h~~~l~--rG~~~~~~lael~g~~~g~-~~G-rggs~H~~~~~------------ 162 (362)
|+..+ ++++|+|++ +||+|+++|+ +|+|+.++|+|++|+.+++ +.| +++++|++...
T Consensus 158 g~~~~l~~~~~l~~~D~v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~ 237 (868)
T 2yic_A 158 MMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIE 237 (868)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEE
T ss_pred HHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCccee
Confidence 98876 458999998 8999999999 9999999999999998876 444 44479987532
Q ss_pred CCcccCCccccchhHHHHHHHHHHhhCC----------CCCeEEEEeCCccc-ccchHHHHHHHHHhCCCC---eEEEEE
Q 018037 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAA-NQGQLFEALNIAALWDLP---AILVCE 228 (362)
Q Consensus 163 ~~~~~~~g~lG~~~p~A~G~A~A~k~~~----------~~~vvv~~~GDGa~-~~G~~~Ealn~A~~~~LP---vIfVv~ 228 (362)
.++.+++|+||+++|+|+|+|+|.|+++ .+.++||++|||++ +||.+||+||+|+.|+|| +||||+
T Consensus 238 l~l~~n~s~Lg~~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~ 317 (868)
T 2yic_A 238 VSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVV 317 (868)
T ss_dssp EEECCCCSSTTTTHHHHHHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEE
T ss_pred eeecCCCccccccccHHHHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 2355778999999999999999999864 56799999999995 999999999999999999 999999
Q ss_pred cCCcccccccccccCCchHhh--hcCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCC
Q 018037 229 NNHYGMGTAEWRAAKSPSYYK--RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTY 305 (362)
Q Consensus 229 NN~~gi~t~~~~~~~~~~~~~--~g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR~~GHs~~D~~~~Y 305 (362)
||+||++++.......+++.. ++||+|+++|||+|+++|++++++|++++|+ ++|+|||+.|||++|||++|++ .|
T Consensus 318 NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p-~~ 396 (868)
T 2yic_A 318 NNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDP-SM 396 (868)
T ss_dssp ECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCG-GG
T ss_pred cCCcccccCccccccccCHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCccccc-cc
Confidence 999999997654444444544 4599999999999999999999999999999 9999999999999999999998 58
Q ss_pred CChhhHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 018037 306 RTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKE 359 (362)
Q Consensus 306 R~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~~ 359 (362)
|+++|++.|++.+||+.+|+++|+++|++|++++++|+++++++|++++++|++
T Consensus 397 ~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~ 450 (868)
T 2yic_A 397 TQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRE 450 (868)
T ss_dssp TCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHhCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999999878999999999999999999999999999999999999999876
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=3.3e-60 Score=521.42 Aligned_cols=320 Identities=20% Similarity=0.233 Sum_probs=276.1
Q ss_pred CCcceeeeCCC-------CcccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHH
Q 018037 33 DTTPLTIETSV-------PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAI 105 (362)
Q Consensus 33 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~v 105 (362)
.|.++-+|.-- +|.++++|.+. +.+|+|+++++|+.|+++|.||+++..+|++|++.|+ .|||++++
T Consensus 329 yc~~ig~e~~~i~~~~~~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~~k~~g~----~GqEa~~~ 402 (1113)
T 2xt6_A 329 YCRHVGVEYTHILEPEQQRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIP 402 (1113)
T ss_dssp HSSSEEEECTTCSCHHHHHHHHHHHHSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHH
T ss_pred ccCCCCcceeccCCHHHhHHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHH
Confidence 57777777421 48999999754 7899999999999999999999999999999988775 99999999
Q ss_pred HHHhc------CCCCCEEEc-CchhHHHHHH--cCCCHHHHHHHHhCCCCCC-CCC-CCCccCCccCC------------
Q 018037 106 GMEAG------ITKKDSIIT-AYRDHCTFLG--RGGTLLEVFSELMGRKDGC-SHG-KGGSMHFYKKD------------ 162 (362)
Q Consensus 106 g~~~~------l~~~D~v~~-~yR~h~~~l~--rG~~~~~~lael~g~~~g~-~~G-rggs~H~~~~~------------ 162 (362)
|++.+ ++++|+|++ +||+|+++|+ +|+++.++|+|++|+.+++ +.| +++++|++...
T Consensus 403 g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~ 482 (1113)
T 2xt6_A 403 MMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIE 482 (1113)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEE
T ss_pred HHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCccee
Confidence 98777 458999998 8999999999 9999999999999999876 444 44479987532
Q ss_pred CCcccCCccccchhHHHHHHHHHHhhCC----------CCCeEEEEeCCcc-cccchHHHHHHHHHhCCCC---eEEEEE
Q 018037 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGA-ANQGQLFEALNIAALWDLP---AILVCE 228 (362)
Q Consensus 163 ~~~~~~~g~lG~~~p~A~G~A~A~k~~~----------~~~vvv~~~GDGa-~~~G~~~Ealn~A~~~~LP---vIfVv~ 228 (362)
.++.+++|+||+++|+|+|+|+|.|+.+ .+.++||++|||+ ++||.+||+||+|+.|+|| +||||+
T Consensus 483 l~l~~n~s~Lg~~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~ 562 (1113)
T 2xt6_A 483 VSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVV 562 (1113)
T ss_dssp EEECCCCSSTTTTHHHHHHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEE
T ss_pred eeecCCCccccccccHHHHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEE
Confidence 2355778999999999999999999865 5789999999999 5999999999999999999 999999
Q ss_pred cCCcccccccccccCCchHhh--hcCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCC
Q 018037 229 NNHYGMGTAEWRAAKSPSYYK--RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTY 305 (362)
Q Consensus 229 NN~~gi~t~~~~~~~~~~~~~--~g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR~~GHs~~D~~~~Y 305 (362)
||+|||+++.......+++.. ++||+|+++|||+|+++|++++++|++++|+ ++|+|||+.|||++|||++|++ .|
T Consensus 563 NN~~gist~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p-~~ 641 (1113)
T 2xt6_A 563 NNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDP-SM 641 (1113)
T ss_dssp ECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCG-GG
T ss_pred eCCcccccCccccccccCHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCcc-cc
Confidence 999999997654443334444 4699999999999999999999999999999 9999999999999999999998 58
Q ss_pred CChhhHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 018037 306 RTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKE 359 (362)
Q Consensus 306 R~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~~ 359 (362)
|+++|++.|++.+||+.+|+++|+++|++|++++++|+++++++|++++++|++
T Consensus 642 ~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~ 695 (1113)
T 2xt6_A 642 TQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRE 695 (1113)
T ss_dssp TCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999878999999999999999999999999999999999999999986
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1.7e-58 Score=499.84 Aligned_cols=308 Identities=16% Similarity=0.199 Sum_probs=252.9
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCC------CCCEEE
Q 018037 45 FTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT------KKDSII 118 (362)
Q Consensus 45 ~~~~~~~~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~------~~D~v~ 118 (362)
|...++|.+ .+.+|+|+++++|+.|+++|.||+++..+|++|+..| ..|||++.+|+..+++ ++|+|+
T Consensus 183 w~~~~~e~~--~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkrf~----~~G~Ea~i~g~~~~~~~a~~~g~~D~v~ 256 (933)
T 2jgd_A 183 WIQQRIESG--RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFS----LEGGDALIPMLKEMIRHAGNSGTREVVL 256 (933)
T ss_dssp HHHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCC----CTTCTTHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----CCCchHHHHHHHHHHHHHhhCCCCCEEe
Confidence 667777754 6689999999999999999999999999999987533 5899999999766665 699999
Q ss_pred c-CchhHHHHHH--cCCCHHHHHHHHhCCCCCCCCCCCCccCCccCCC----------CcccCCccccchhHHHHHHHHH
Q 018037 119 T-AYRDHCTFLG--RGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDS----------GFYGGHGIVGAQIPLGCGLAFA 185 (362)
Q Consensus 119 ~-~yR~h~~~l~--rG~~~~~~lael~g~~~g~~~Grggs~H~~~~~~----------~~~~~~g~lG~~~p~A~G~A~A 185 (362)
+ +||+|+++|+ +|+|+.++|+|++|+.+++++|+++++|++.... ++.+++|++|+++|+|+|+|+|
T Consensus 257 g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~~p~A~G~A~A 336 (933)
T 2jgd_A 257 GMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRA 336 (933)
T ss_dssp ECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccccCHHHHHHHH
Confidence 6 8999999999 9999999999999999888767777899875432 2357889999999999999999
Q ss_pred HhhCC-----CCCeEEEEeCCccc-ccchHHHHHHHHHhCCCC---eEEEEEcCCccccc-ccccccCCchHhhh--cCC
Q 018037 186 QKYSK-----DETVTFALYGDGAA-NQGQLFEALNIAALWDLP---AILVCENNHYGMGT-AEWRAAKSPSYYKR--GDY 253 (362)
Q Consensus 186 ~k~~~-----~~~vvv~~~GDGa~-~~G~~~Ealn~A~~~~LP---vIfVv~NN~~gi~t-~~~~~~~~~~~~~~--g~g 253 (362)
.|+++ .+.++||++|||++ +||.+||+||+|+.|++| +||||+||+|+|++ +...+...+++..+ ++|
T Consensus 337 ~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a~g 416 (933)
T 2jgd_A 337 RLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQ 416 (933)
T ss_dssp HHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGGTTT
T ss_pred HHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHHcC
Confidence 99884 67899999999997 999999999999999999 99999999999999 77765555556554 599
Q ss_pred cceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCCCChhhHHhHhhcCCHHHHHHHHHHHcC
Q 018037 254 VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHD 332 (362)
Q Consensus 254 i~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g 332 (362)
+|+++|||+|+++|++++++|++++|+ ++|+|||+.|||++|||++|++ .||+++|++.|++.+||+.+|+++|+++|
T Consensus 417 ~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~-~yr~~~e~~~~~~~~dPi~~~~~~Li~~G 495 (933)
T 2jgd_A 417 APIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEP-SATQPLMYQKIKKHPTPRKIYADKLEQEK 495 (933)
T ss_dssp CCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC------------CCTTHHHHHTSCCHHHHHHHHHHTTT
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccch-hhCCHHHHHHHHccCCHHHHHHHHHHHcC
Confidence 999999999999999999999999999 9999999999999999999987 59999999999866799999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 018037 333 LATEKELKDIEKEVRKEVDDAIAKAKE 359 (362)
Q Consensus 333 ~~t~~el~~i~~e~~~~v~~a~~~A~~ 359 (362)
++|++++++|+++++++|+++++.|++
T Consensus 496 v~t~~~~~~i~~~~~~~v~~a~~~A~~ 522 (933)
T 2jgd_A 496 VATLEDATEMVNLYRDALDAGDCVVAE 522 (933)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTSCCCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988876
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.98 E-value=7.3e-32 Score=282.85 Aligned_cols=233 Identities=18% Similarity=0.163 Sum_probs=176.5
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCC-CCCEEE--cCch
Q 018037 46 TSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT-KKDSII--TAYR 122 (362)
Q Consensus 46 ~~~~~~~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~-~~D~v~--~~yR 122 (362)
...+++.|.+...++.++|.++|+.| |.+...+ . ++..|+++++.|++++.+++...++ +.|+++ ..||
T Consensus 10 ~l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~~~~---~--~~~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~ 81 (621)
T 2o1s_A 10 TLALVDSTQELRLLPKESLPKLCDEL---RRYLLDS---V--SRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQ 81 (621)
T ss_dssp TGGGCSSHHHHTTSCGGGHHHHHHHH---HHHHHHH---S--CGGGCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTT
T ss_pred hhhhcCChHHhhhCCHHHHHHHHHHH---HHHHHHH---H--hhcCCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchH
Confidence 45678888888899999999999988 6654432 2 2357999999999999999999999 899998 6899
Q ss_pred hHHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCccCCccC-C-CCcccCCccccchhHHHHHHHHHHhhCCCCCeEEEEeC
Q 018037 123 DHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKK-D-SGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYG 200 (362)
Q Consensus 123 ~h~~~l~rG~~~~~~lael~g~~~g~~~Grggs~H~~~~-~-~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~G 200 (362)
++++.+.+|. . .++.. .+..+|.+++.++ + .+...++|++|+++|+|+|+|+|.++++++++|||++|
T Consensus 82 ~y~~~~l~G~-~----~~~~~-----~r~~~g~~g~~~~~~s~~~~~~~G~~G~gl~~A~G~AlA~~~~~~~~~Vv~v~G 151 (621)
T 2o1s_A 82 AYPHKILTGR-R----DKIGT-----IRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIG 151 (621)
T ss_dssp CHHHHHTTTT-G----GGGGG-----TTSTTSCCSSCCTTTCTTCCSCCSSSSCHHHHHHHHHHHHHHHTSCCCEEEEEE
T ss_pred HHHHHHHhCC-H----hhhhc-----ccccCCCCCCCCCCCCCCCccCCcccchHHHHHHHHHHHHHHhCCCCeEEEEEc
Confidence 9999998886 1 11210 1112222222221 1 12334689999999999999999999999999999999
Q ss_pred CcccccchHHHHHHHHHhCCCCeEEEEEcCCcccccccccccCC----------------------------------ch
Q 018037 201 DGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKS----------------------------------PS 246 (362)
Q Consensus 201 DGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~t~~~~~~~~----------------------------------~~ 246 (362)
||++++|.+||+||+|+.|++|+||||+||+|+++++...+... ++
T Consensus 152 DG~~~~G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r~~~ 231 (621)
T 2o1s_A 152 DGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEE 231 (621)
T ss_dssp TTGGGSHHHHHHHHHHHHHCCSEEEEEEECC-------------------------------------------------
T ss_pred hhhhhccHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 99999999999999999999999999999999988765432100 01
Q ss_pred H-------hh--hcCCcceE-EEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCC
Q 018037 247 Y-------YK--RGDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMS 299 (362)
Q Consensus 247 ~-------~~--~g~gi~g~-~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~ 299 (362)
| .. +++|++++ +|||+|++++.+++++|++. ++|+|||+.|+|.+||+..
T Consensus 232 ~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~---~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 232 HIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDL---KGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp -------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHS---CSEEEEEEECCCTTCCCCC
T ss_pred HhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHHc---CCCEEEEEEEecccCCChh
Confidence 1 12 45888888 99999999999999988764 8999999999999999854
No 10
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.97 E-value=2.3e-31 Score=279.50 Aligned_cols=232 Identities=17% Similarity=0.140 Sum_probs=179.5
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHHhcCC-CCCEEEcCch
Q 018037 44 PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT-KKDSIITAYR 122 (362)
Q Consensus 44 ~~~~~~~~~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~~l~-~~D~v~~~yR 122 (362)
|+ ..+++.|.+...++.++|.++|+.| |++.. +++. +..|+++++.|+-.+.+++...++ +.|+++.+ |
T Consensus 11 ~~-l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~~---~~~~--~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~ 80 (629)
T 2o1x_A 11 PL-LDQIHGPKDLKRLSREQLPALTEEL---RGEIV---RVCS--RGGLHLASSLGAVDIITALHYVLDSPRDRILFD-V 80 (629)
T ss_dssp TT-GGGCSSHHHHTTSCGGGHHHHHHHH---HHHHH---HHHT--TSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-S
T ss_pred ch-hhhCCChhhhhhCCHHHHHHHHHHH---HHHHH---HHHH--hcCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-C
Confidence 53 5678888888899999999999988 65433 3333 257999999999777777766678 89999998 9
Q ss_pred hHH---HHHHcCC-CHHHHHHHHhCCCCCCCCCCCCccCCccCCCCcccCCccccchhHHHHHHHHHHhhCCCCCeEEEE
Q 018037 123 DHC---TFLGRGG-TLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFAL 198 (362)
Q Consensus 123 ~h~---~~l~rG~-~~~~~lael~g~~~g~~~Grggs~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~ 198 (362)
+|+ +.+.+|. +....++++.|. +|++.++. |+ ++.+++|++|+++|+|+|+|+|.|+++++++|||+
T Consensus 81 GH~~y~~~~l~G~~~~~~~~r~~~g~-~G~p~~~~-s~-------~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v 151 (629)
T 2o1x_A 81 GHQAYAHKILTGRRDQMADIKKEGGI-SGFTKVSE-SE-------HDAITVGHASTSLTNALGMALARDAQGKDFHVAAV 151 (629)
T ss_dssp STTCHHHHHTTTTGGGGGGTTSTTSC-CSSCCGGG-CT-------TCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEE
T ss_pred chHHHHHHHHhCcHhHHhCcccCCCC-CCCCCCCC-CC-------CCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEE
Confidence 996 5555665 333334444442 24333321 33 24567899999999999999999999999999999
Q ss_pred eCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccccccccccC--------------------------C--------
Q 018037 199 YGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAK--------------------------S-------- 244 (362)
Q Consensus 199 ~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~t~~~~~~~--------------------------~-------- 244 (362)
+|||++++|.+||+||+|+.|++|+||||+||+|+++++...+.. .
T Consensus 152 ~GDG~~~~G~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~ 231 (629)
T 2o1x_A 152 IGDGSLTGGMALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSR 231 (629)
T ss_dssp EETTGGGSHHHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC---------------------------------
T ss_pred EchhhhhccHHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHH
Confidence 999999999999999999999999999999999998765531100 0
Q ss_pred -chHh---------h--hcCCcceE-EEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCC
Q 018037 245 -PSYY---------K--RGDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHS 297 (362)
Q Consensus 245 -~~~~---------~--~g~gi~g~-~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs 297 (362)
+++. . .+||++++ +|||+|++++.+++++|++. ++|+||++.|++.+||+
T Consensus 232 ~~d~~~~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~---~~P~lI~v~t~kg~G~~ 294 (629)
T 2o1x_A 232 AKNSTRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVDL---DGPTILHIVTTKGKGLS 294 (629)
T ss_dssp ------------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTTS---SSEEEEEEECCTTTTCH
T ss_pred HHHHHHhhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHhc---CCCEEEEEEEecCCCCC
Confidence 1322 3 35899999 99999999999988887542 89999999999999997
No 11
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.94 E-value=9.2e-27 Score=246.35 Aligned_cols=161 Identities=22% Similarity=0.212 Sum_probs=138.4
Q ss_pred CCccCCCCcccCCccccchhHHHHHHHHHHhhCC----------CCCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEE
Q 018037 157 HFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AIL 225 (362)
Q Consensus 157 H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~----------~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIf 225 (362)
|......++..++|++|+++|.|+|+|+|.++.+ .+++|||++|||++++|.+||+|++|+.|+|| +|+
T Consensus 103 hp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~ 182 (680)
T 1gpu_A 103 HPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIA 182 (680)
T ss_dssp SCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEE
T ss_pred CCCccCCCeeeccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEE
Confidence 5433345788899999999999999999988654 37899999999999999999999999999999 899
Q ss_pred EEEcCCcccccccccccCCchHhhh--cCCcceE-EEeCC-CHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCC
Q 018037 226 VCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGM-DALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDP 301 (362)
Q Consensus 226 Vv~NN~~gi~t~~~~~~~~~~~~~~--g~gi~g~-~VdG~-D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~ 301 (362)
||+||+|+|+++..... .+++.++ +||++++ +|||| |++++++++++|++ ..++|+||++.|+|++||++.|+
T Consensus 183 i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~--~~~~P~lI~~~T~kg~G~~~~~~ 259 (680)
T 1gpu_A 183 IYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKL--SKDKPTLIKMTTTIGYGSLHAGS 259 (680)
T ss_dssp EEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHH--CTTSCEEEEEECCTTTTSTTTTS
T ss_pred EEECCCceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH--CCCCCEEEEEEeecccccccCCC
Confidence 99999999988776543 5678775 5999999 99999 99999999999886 12899999999999999998775
Q ss_pred C---CCCCChhhHHhHhhcCCHH
Q 018037 302 G---STYRTRDEISGVRQERDPI 321 (362)
Q Consensus 302 ~---~~YR~~~e~~~~~~~~DPi 321 (362)
. ..||+++|+++|++ ++++
T Consensus 260 ~~~H~~~~~~ee~~~~~~-~~~~ 281 (680)
T 1gpu_A 260 HSVHGAPLKADDVKQLKS-KFGF 281 (680)
T ss_dssp GGGSSSCCCHHHHHHHHH-HTTC
T ss_pred CccCCCCCCHHHHHHHHH-HcCC
Confidence 3 57999999999974 4443
No 12
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.93 E-value=1.9e-25 Score=235.27 Aligned_cols=154 Identities=22% Similarity=0.243 Sum_probs=134.3
Q ss_pred CCcccCCccccchhHHHHHHHHHHhhCC----------CCCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCC
Q 018037 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNH 231 (362)
Q Consensus 163 ~~~~~~~g~lG~~~p~A~G~A~A~k~~~----------~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~ 231 (362)
.++..++|++|+++|.|+|+|+|.++.+ .+++|||++|||++++|.+||+|++|+.++|| +||||+||+
T Consensus 111 ~g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 190 (651)
T 2e6k_A 111 PGVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNR 190 (651)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECC
T ss_pred CCeeeccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCC
Confidence 3678899999999999999999998654 68899999999999999999999999999999 899999999
Q ss_pred cccccccccccCCchHhhh--cCCcceE-EEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCCCC---
Q 018037 232 YGMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTY--- 305 (362)
Q Consensus 232 ~gi~t~~~~~~~~~~~~~~--g~gi~g~-~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~~~~Y--- 305 (362)
|+++++..... .+++.++ +||++++ +|||+|++++++++++|++ .++|+||++.|+|.+||++.|+ ..|
T Consensus 191 ~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~P~lI~~~t~kg~G~~~~~~-~~~H~~ 265 (651)
T 2e6k_A 191 ISIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAKL---DERPTLIAVRSHIGFGSPKQDS-AKAHGE 265 (651)
T ss_dssp EETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHHH---SSSCEEEEEECCTTTTSTTTTS-GGGTSS
T ss_pred ccccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHH---CCCCEEEEEEeEeccccccccc-cccccc
Confidence 99988876654 5678774 5999999 9999999999999999876 3899999999999999995554 345
Q ss_pred -CChhhHHhHhhcCCHHH
Q 018037 306 -RTRDEISGVRQERDPIE 322 (362)
Q Consensus 306 -R~~~e~~~~~~~~DPi~ 322 (362)
++++|+++|+ +++|+.
T Consensus 266 ~~~~~e~~~~~-~~~~~~ 282 (651)
T 2e6k_A 266 PLGPEAVEATR-RNLGWP 282 (651)
T ss_dssp CCHHHHHHHHH-HHHTCC
T ss_pred CCCHHHHHHHH-HHcCCC
Confidence 6789999997 466653
No 13
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.92 E-value=2.4e-24 Score=227.49 Aligned_cols=151 Identities=23% Similarity=0.240 Sum_probs=132.0
Q ss_pred CCcccCCccccchhHHHHHHHHHHhhCC----------CCCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCC
Q 018037 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNH 231 (362)
Q Consensus 163 ~~~~~~~g~lG~~~p~A~G~A~A~k~~~----------~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~ 231 (362)
.++..++|++|+++|.|+|+|+|.++.+ .+++|||++|||++++|.+||+|++|+.++|| +|+||+||+
T Consensus 107 ~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 186 (669)
T 2r8o_A 107 AGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNG 186 (669)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred CCcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 3678899999999999999999988653 37899999999999999999999999999999 889999999
Q ss_pred cccccccccccCCchHhhh--cCCcceE-EEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCC-CCCC---CC
Q 018037 232 YGMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSM-SDPG---ST 304 (362)
Q Consensus 232 ~gi~t~~~~~~~~~~~~~~--g~gi~g~-~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~-~D~~---~~ 304 (362)
|+|+.+..... .+++.++ +||++++ +|||+|++++++++++|++ ..++|+||++.|+|..||+. .|+. ..
T Consensus 187 ~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~--~~~~P~lI~~~T~kg~G~~~~~~~~~~H~~ 263 (669)
T 2r8o_A 187 ISIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARA--VTDKPSLLMCKTIIGFGSPNKAGTHDSHGA 263 (669)
T ss_dssp EETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH--CCSSCEEEEEECCTTTTCTTTTTSGGGTSS
T ss_pred cEecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHh--cCCCCEEEEEEeEeccCcCCcCCCCcccCC
Confidence 99988776543 5677774 5999999 9999999999999999886 13899999999999999994 4443 56
Q ss_pred CCChhhHHhHhh
Q 018037 305 YRTRDEISGVRQ 316 (362)
Q Consensus 305 YR~~~e~~~~~~ 316 (362)
||+++|+++|++
T Consensus 264 ~~~~ee~~~~~~ 275 (669)
T 2r8o_A 264 PLGDAEIALTRE 275 (669)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 999999999874
No 14
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2.8e-24 Score=227.15 Aligned_cols=149 Identities=19% Similarity=0.214 Sum_probs=126.5
Q ss_pred CcccCCccccchhHHHHHHHHHHhhC-------------CCCCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEc
Q 018037 164 GFYGGHGIVGAQIPLGCGLAFAQKYS-------------KDETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCEN 229 (362)
Q Consensus 164 ~~~~~~g~lG~~~p~A~G~A~A~k~~-------------~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~N 229 (362)
++..++|++|+++|.|+|+|+|.|+. +.+++|+|++|||++++|++||++|+|+.|+|| +|+||+|
T Consensus 127 gv~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~ 206 (700)
T 3rim_A 127 GVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDR 206 (700)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CccccccccCCcchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEEC
Confidence 67788999999999999999999974 568899999999999999999999999999998 8999999
Q ss_pred CCcccccccccccCCchHhhh--cCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCC---
Q 018037 230 NHYGMGTAEWRAAKSPSYYKR--GDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGS--- 303 (362)
Q Consensus 230 N~~gi~t~~~~~~~~~~~~~~--g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~~~--- 303 (362)
|+|+|+++..... ..++.++ +||+++++| ||||+++|++|+++|.+ ..++|+||+++|+|++||+......
T Consensus 207 N~~si~~~~~~~~-~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~--~~~~P~lI~~~T~kG~G~~~~e~~~~~H 283 (700)
T 3rim_A 207 NQISIEDDTNIAL-CEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQA--VTDRPSFIALRTVIGYPAPNLMDTGKAH 283 (700)
T ss_dssp CSEETTEEGGGTC-CCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHH--CCSSCEEEEEECCTTTTCTTTTTSHHHH
T ss_pred CCcccccchhhcc-chhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHH--cCCCCEEEEEEEEeeecCCccCCCcccc
Confidence 9999998877543 5677775 599999999 99999999999999876 1389999999999999998654321
Q ss_pred -CCCChhhHHhHh
Q 018037 304 -TYRTRDEISGVR 315 (362)
Q Consensus 304 -~YR~~~e~~~~~ 315 (362)
.-.+++|++.++
T Consensus 284 g~~~~~e~~~~~~ 296 (700)
T 3rim_A 284 GAALGDDEVAAVK 296 (700)
T ss_dssp HSCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 123556666543
No 15
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.92 E-value=6.7e-24 Score=222.16 Aligned_cols=142 Identities=23% Similarity=0.321 Sum_probs=119.1
Q ss_pred cCCccCCCCcccCCccccchhHHHHHHHHHHhhCCC-CCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCCcc
Q 018037 156 MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKD-ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYG 233 (362)
Q Consensus 156 ~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~-~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~~g 233 (362)
.|......++..++|++|+++|+|+|+|+|.++.+. ++.|||++|||++++|.+||+||+|+.|+|| +|+|++||+|+
T Consensus 107 ghp~~~~~~~d~~~G~lG~gl~~A~G~AlA~~~~~~~~~~vv~v~GDG~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~ 186 (616)
T 3mos_A 107 GHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLG 186 (616)
T ss_dssp SSCCTTSTTCSSCCCSTTCHHHHHHHHHHHHHHTSCCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBC
T ss_pred CCCCCCCCcccccccccCCccHHHHHHHHHHHHhCCCCCEEEEEECccccccCcHHHHHHHHHHcCCCcEEEEEECCCCC
Confidence 344322334556899999999999999999986555 6899999999999999999999999999999 67899999999
Q ss_pred cccccccccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCC
Q 018037 234 MGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPG 302 (362)
Q Consensus 234 i~t~~~~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~~ 302 (362)
++.+.......++|.++ +||+++++|||+|++++.++++++ .++|+||++.|+|++||+..+++
T Consensus 187 i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~-----~~~P~lI~v~T~kg~G~~~~e~~ 252 (616)
T 3mos_A 187 QSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA-----KHQPTAIIAKTFKGRGITGVEDK 252 (616)
T ss_dssp SSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC-----CSSCEEEEEECCTTTTSTTTTTC
T ss_pred CcCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc-----CCCCEEEEEEEecccccccccCc
Confidence 98877665545677764 599999999999999999888543 38999999999999999876544
No 16
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.92 E-value=2.3e-23 Score=220.01 Aligned_cols=150 Identities=21% Similarity=0.231 Sum_probs=131.7
Q ss_pred CcccCCccccchhHHHHHHHHHHhhCC----------CCCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCCc
Q 018037 164 GFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (362)
Q Consensus 164 ~~~~~~g~lG~~~p~A~G~A~A~k~~~----------~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~~ 232 (362)
++..++|+||+++|.|+|+|+|.++.+ .+++|||++|||++++|.+||++++|+.|+|| +|+||+||+|
T Consensus 110 gv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~ 189 (673)
T 1r9j_A 110 GVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYI 189 (673)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSB
T ss_pred CeeeccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 677889999999999999999998754 58899999999999999999999999999999 8999999999
Q ss_pred ccccccccccCCchHhhh--cCCcceE-EEeC-CCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCC---CCCC
Q 018037 233 GMGTAEWRAAKSPSYYKR--GDYVPGL-KVDG-MDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDP---GSTY 305 (362)
Q Consensus 233 gi~t~~~~~~~~~~~~~~--g~gi~g~-~VdG-~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~---~~~Y 305 (362)
+|+++..... ..++.++ +||++++ +||| +|++++++|+++|++ ..++|+||+++|+|++||++.|. +..+
T Consensus 190 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~--~~~~P~lI~~~T~kg~G~~~~~~~~~H~~~ 266 (673)
T 1r9j_A 190 SIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKA--TKGKPKMIVQTTTIGFGSSKQGTEKVHGAP 266 (673)
T ss_dssp CSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH--CCSSCEEEEEECCTTTTSTTTTSGGGTSSC
T ss_pred ccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHH--cCCCCEEEEEecccccccccCCCcccccCC
Confidence 9988877665 5678774 5999999 9999 999999999999876 13899999999999999996554 2346
Q ss_pred CChhhHHhHhh
Q 018037 306 RTRDEISGVRQ 316 (362)
Q Consensus 306 R~~~e~~~~~~ 316 (362)
++++|++.|++
T Consensus 267 ~~~ee~~~~~~ 277 (673)
T 1r9j_A 267 LGEEDIANIKA 277 (673)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 88999988864
No 17
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.92 E-value=1e-23 Score=222.84 Aligned_cols=246 Identities=20% Similarity=0.185 Sum_probs=168.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCcchHHHHHHHH---hcCC-------CCCEEE-c-Cc
Q 018037 54 SRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGME---AGIT-------KKDSII-T-AY 121 (362)
Q Consensus 54 ~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~---~~l~-------~~D~v~-~-~y 121 (362)
-....++.++|.++ ...+|.+-..+.. +.+ .|+.-.+.|.--+.+.+. ...+ +.|.++ + .|
T Consensus 6 ~~~~~l~~~~l~~~---a~~iR~~~~~~v~--~a~--~GH~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH 78 (675)
T 1itz_A 6 LQGKAATGELLEKS---VNTIRFLAIDAVE--KAN--SGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGH 78 (675)
T ss_dssp ----CCCHHHHHHH---HHHHHHHHHHHHH--HHT--CSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGG
T ss_pred hccCCCCHHHHHHH---HHHHHHHHHHHHH--HcC--CCccCccHhHHHHHHHHHHHHhcCCcCCCCCCCCCeEEEcCcc
Confidence 34567888988864 4556765443332 322 244334666655555554 2333 246654 4 34
Q ss_pred hh---HHHHHHcCC---CHHHHHHHHhCCCCCCCCCCCCccCCcc-CCCCcccCCccccchhHHHHHHHHHHhhCC----
Q 018037 122 RD---HCTFLGRGG---TLLEVFSELMGRKDGCSHGKGGSMHFYK-KDSGFYGGHGIVGAQIPLGCGLAFAQKYSK---- 190 (362)
Q Consensus 122 R~---h~~~l~rG~---~~~~~lael~g~~~g~~~Grggs~H~~~-~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~---- 190 (362)
-+ +.+.+..|. +.+++ .. +.+.. ++ -+.|.-. .-.++..++|+||+++|+|+|+|+|.++.+
T Consensus 79 ~~~~lYa~l~l~G~~~~~~~~l-~~-~r~~~----~~-~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n 151 (675)
T 1itz_A 79 GCMLQYALLHLAGYDSVKEEDL-KQ-FRQWG----SR-TPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFN 151 (675)
T ss_dssp GHHHHHHHHHHHTCTTCCHHHH-TT-TTSTT----CS-SCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHcCCCCCCHHHH-Hh-cccCC----CC-CCCCCCCCCCCCeeECCccHHhHHHHHHHHHHHhhhhccccc
Confidence 44 333344454 22221 11 11111 11 0123321 123677889999999999999999998765
Q ss_pred ------CCCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCCcccccccccccCCchHhhh--cCCcceE-EEe
Q 018037 191 ------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGL-KVD 260 (362)
Q Consensus 191 ------~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~~gi~t~~~~~~~~~~~~~~--g~gi~g~-~Vd 260 (362)
++++|||++|||++++|.+||+|++|+.++|| +|+||+||+|+|+.+..... .+++..+ +||++++ +||
T Consensus 152 ~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vd 230 (675)
T 1itz_A 152 KPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKN 230 (675)
T ss_dssp BTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESC
T ss_pred ccccCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEec
Confidence 68899999999999999999999999999995 89999999999988776644 6778774 5999999 999
Q ss_pred CC-CHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCC----CCCChhhHHhHhh
Q 018037 261 GM-DALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGS----TYRTRDEISGVRQ 316 (362)
Q Consensus 261 G~-D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~~~----~YR~~~e~~~~~~ 316 (362)
|+ |++++.+++++|++. .++|+||+++|+|.+||+...+.. .+.+++|++++++
T Consensus 231 G~~d~~~l~~al~~a~~~--~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~~ 289 (675)
T 1itz_A 231 GNTGYDDIRAAIKEAKAV--TDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRQ 289 (675)
T ss_dssp TTTCHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHC--CCCeEEEEEeeecccCcccccCcccccCCCCCHHHHHHHHH
Confidence 99 999999999998761 389999999999999998643321 3467788777653
No 18
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.91 E-value=3.3e-23 Score=217.09 Aligned_cols=198 Identities=19% Similarity=0.217 Sum_probs=146.3
Q ss_pred cccccCcchHHHHHHHHhcCC---------CCCEEEc--Cchh---HHHHHHcCC--CHHHHHHHHhCCCCCCCCCCCCc
Q 018037 92 GFCHLYDGQEAVAIGMEAGIT---------KKDSIIT--AYRD---HCTFLGRGG--TLLEVFSELMGRKDGCSHGKGGS 155 (362)
Q Consensus 92 gf~h~~~GqEa~~vg~~~~l~---------~~D~v~~--~yR~---h~~~l~rG~--~~~~~lael~g~~~g~~~Grggs 155 (362)
|+.-.+.|.--+.+.+...|+ +.|.++. .|-+ ..+....|. +.+++ .. +.+..+.+ +
T Consensus 27 GH~g~~lg~~ei~~~L~~~~~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l-~~-~r~~~s~~-----~ 99 (632)
T 3l84_A 27 GHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDL-KN-FRQLHSKT-----P 99 (632)
T ss_dssp SCCHHHHHHHHHHHHHTTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHHTCSCCHHHH-TT-TTCTTCSS-----C
T ss_pred CCCCcChhHHHHHHHHHHHhCcCCCCCCCCCCCEEEEcCCcccHHHHHHHHHhCCCCCHHHH-HH-HhcCCCCC-----C
Confidence 433336666666666666665 4687654 3544 333344454 34432 11 11111111 1
Q ss_pred cCCccCCCCcccCCccccchhHHHHHHHHHHhhCCC-------CCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEE
Q 018037 156 MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKD-------ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVC 227 (362)
Q Consensus 156 ~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~-------~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv 227 (362)
.|.-....++..++|++|+++|+|+|+|+|.++.+. ++.|||++|||++++|.+||+|++|+.|+|| +|+|+
T Consensus 100 ghp~~~~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~ 179 (632)
T 3l84_A 100 GHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIY 179 (632)
T ss_dssp SSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEE
T ss_pred CCCCCCCCCcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEE
Confidence 233222236778899999999999999999987643 8899999999999999999999999999998 78999
Q ss_pred EcCCcccccccccccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCC
Q 018037 228 ENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSD 300 (362)
Q Consensus 228 ~NN~~gi~t~~~~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D 300 (362)
+||+|+|+.+..... .+++.++ +||+++++|||||++++.+++++|++ .++|+||+++|+|.+||+...
T Consensus 180 nnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~A~~---~~~P~lI~v~T~kG~G~~~~e 250 (632)
T 3l84_A 180 DSNNISIEGDVGLAF-NENVKMRFEAQGFEVLSINGHDYEEINKALEQAKK---STKPCLIIAKTTIAKGAGELE 250 (632)
T ss_dssp EECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHHHT---CSSCEEEEEECCTTTTCGGGT
T ss_pred ECCCcccccchhhhc-ChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHHHHh---CCCCEEEEEeeEeeecCCCCC
Confidence 999999988776543 5677774 59999999999999999998888764 289999999999999998543
No 19
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.91 E-value=2.4e-23 Score=224.73 Aligned_cols=266 Identities=15% Similarity=0.049 Sum_probs=172.3
Q ss_pred CcccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--hccccccccccCcchHHHHHH-HHhcCC------CC
Q 018037 44 PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLY--KAKLVRGFCHLYDGQEAVAIG-MEAGIT------KK 114 (362)
Q Consensus 44 ~~~~~~~~~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~--~~g~i~gf~h~~~GqEa~~vg-~~~~l~------~~ 114 (362)
|| ..+|..|.+.......+|.+-+ ...+|.+-..+...- +.+++.|+.-.+.|.--+.+. ....++ +.
T Consensus 58 ~~-l~~i~~~~~~~~p~d~~l~~~l--a~~iR~~~i~~v~~a~~~~~~~gGH~gs~ls~ael~~~l~~~~~~~~~~~~~~ 134 (886)
T 2qtc_A 58 NY-INTIPVEEQPEYPGNLELERRI--RSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGG 134 (886)
T ss_dssp CS-SCSSCGGGCCCCCSCHHHHHHH--HHHHHHHHHHHHHHHHHTCSCCCCCSHHHHHHHHHHHHHHHHTCCCCCSSSCC
T ss_pred ch-hhhCCCccccCCCchHHHHHHH--HHHHHHHHHHHHHHhcCCCCCCccCcCCcHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 54 5666555555555555665333 334555433332221 123455655556665554443 344467 57
Q ss_pred CEEEcC-chh---HHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCccCCccCCCCcccCCccccchhHHHHHHHHHHhh--
Q 018037 115 DSIITA-YRD---HCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKY-- 188 (362)
Q Consensus 115 D~v~~~-yR~---h~~~l~rG~~~~~~lael~g~~~g~~~Grggs~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~-- 188 (362)
|+|+.. |-+ +++.+..|.-..+-|..+ - ..+...|-.+..|......++...+|++|.+++.|+|+|+|.|+
T Consensus 135 D~V~~~GH~sp~~Ya~~~l~Gr~~~e~l~~f-R-q~~~~~gl~~~p~~~~~p~~~~~~tG~~G~g~s~AiG~A~a~~~l~ 212 (886)
T 2qtc_A 135 DLVYFQGHISPGVYARAFLEGRLTQEQLDNF-R-QEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLE 212 (886)
T ss_dssp CEEECCGGGHHHHHHHHHHTTSSCHHHHTTB-T-CCTTSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcchhHHHHHHHHHHhCCCCHHHHHhc-c-CCCCCCCCCCCCCcccCCCcccccccccCccHHHHHHHHHHhhhhc
Confidence 877774 444 333455565322222221 1 11111121121221111113667899999999999999999998
Q ss_pred -----CCCCCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCCccccccccccc-CCchHhh--hcCCcceEEE
Q 018037 189 -----SKDETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAA-KSPSYYK--RGDYVPGLKV 259 (362)
Q Consensus 189 -----~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~~gi~t~~~~~~-~~~~~~~--~g~gi~g~~V 259 (362)
++.++.|||++|||++++|++|||||+|+.++|| +||||+||+++++.+..... ...++.. +++|++.++|
T Consensus 213 ~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~~~~v 292 (886)
T 2qtc_A 213 HRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKV 292 (886)
T ss_dssp HTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEE
T ss_pred ccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCCEEEE
Confidence 7889999999999999999999999999999997 89999999999988765421 2234554 3588888887
Q ss_pred ---------------------------------------------------------------------eCCCHHHHHHH
Q 018037 260 ---------------------------------------------------------------------DGMDALAVKQA 270 (362)
Q Consensus 260 ---------------------------------------------------------------------dG~D~~av~~a 270 (362)
||||+.+|++|
T Consensus 293 ~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a 372 (886)
T 2qtc_A 293 MWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAA 372 (886)
T ss_dssp CBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHHHHHH
T ss_pred ecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHHHHHH
Confidence 79999999999
Q ss_pred HHHHHHHhccCCCEEEEEEEecCCCCCC--CCCCC----CCCChhhHHhHhh
Q 018037 271 CKFAKEHALKNGPMILEMDTYRYHGHSM--SDPGS----TYRTRDEISGVRQ 316 (362)
Q Consensus 271 ~~~A~~~ar~~gP~lIe~~tyR~~GHs~--~D~~~----~YR~~~e~~~~~~ 316 (362)
+++|+++ +++|+||+++|+|++||+. .++.. .|++.+|++.|++
T Consensus 373 ~~~A~~~--~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r~ 422 (886)
T 2qtc_A 373 FKKAQET--KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVRHIRD 422 (886)
T ss_dssp HHHHHHC--CSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHH
T ss_pred HHHHHHc--CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHHHHHH
Confidence 9999874 3699999999999999973 33321 2889999998874
No 20
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.90 E-value=6.2e-23 Score=216.17 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=119.9
Q ss_pred CcccCCccccchhHHHHHHHHHHhhCCC----------CCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCCc
Q 018037 164 GFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (362)
Q Consensus 164 ~~~~~~g~lG~~~p~A~G~A~A~k~~~~----------~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~~ 232 (362)
++..++|+||+++|+|+|+|+|.++.+. ++.|||++|||++++|++||+|++|+.|+|| +|+|++||+|
T Consensus 110 gve~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~ 189 (663)
T 3kom_A 110 GVETTTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNI 189 (663)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC-
T ss_pred CcccCCcchhhHHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCc
Confidence 5677899999999999999999986543 7899999999999999999999999999999 7899999999
Q ss_pred ccccccccccCCchHhhh--cCCcceE-EEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCC--CC--
Q 018037 233 GMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGS--TY-- 305 (362)
Q Consensus 233 gi~t~~~~~~~~~~~~~~--g~gi~g~-~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~~~--~Y-- 305 (362)
+++++..... .+++.++ +||++++ +|||||++++.+++++|++. .++|+||+++|+|.+||+...... ++
T Consensus 190 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~A~~~--~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~~ 266 (663)
T 3kom_A 190 SIDGDTKGWF-SDNTPERFRAYGWHVIENVDGHDFVAIEKAINEAHSQ--QQKPTLICCKTVIGFGSPEKAGTASVHGSP 266 (663)
T ss_dssp ----CGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHC--SSSCEEEEEECCTTTTCTTTTTCSSTTSSC
T ss_pred ccccchhhhc-chhHHHHHHHCCCeEEEEEcCCCHHHHHHHHHHHHhc--CCCCEEEEEecccccccCCCCCCccccCCC
Confidence 9988776543 5678775 5999999 99999999999999888761 289999999999999998653322 22
Q ss_pred CChhhHHhH
Q 018037 306 RTRDEISGV 314 (362)
Q Consensus 306 R~~~e~~~~ 314 (362)
-+++|++..
T Consensus 267 l~~e~~~~~ 275 (663)
T 3kom_A 267 LSDQERASA 275 (663)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 245666653
No 21
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.90 E-value=6.5e-23 Score=217.16 Aligned_cols=147 Identities=22% Similarity=0.246 Sum_probs=113.2
Q ss_pred CcccCCccccchhHHHHHHHHHHhhCCC----------CCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCCc
Q 018037 164 GFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (362)
Q Consensus 164 ~~~~~~g~lG~~~p~A~G~A~A~k~~~~----------~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~~ 232 (362)
++..++|+||+++|+|+|+|+|.++.+. ++.|||++|||++++|.++|+|++|+.++|| +|+|++||+|
T Consensus 149 gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~ 228 (711)
T 3uk1_A 149 GVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGI 228 (711)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSE
T ss_pred CcccCccchhhHHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCc
Confidence 6677899999999999999999986543 7899999999999999999999999999999 8899999999
Q ss_pred ccccccccccCCchHhhh--cCCcceEE-EeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCCCCC---
Q 018037 233 GMGTAEWRAAKSPSYYKR--GDYVPGLK-VDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYR--- 306 (362)
Q Consensus 233 gi~t~~~~~~~~~~~~~~--g~gi~g~~-VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~~~~YR--- 306 (362)
+|+.+..... .+++.++ +||+++++ |||+|++++.+++++|++ .++|+||+++|+|.+||+...+...|.
T Consensus 229 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~Al~~A~~---~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~~ 304 (711)
T 3uk1_A 229 SIDGDVVNWF-HDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKAKR---SDKPSLICCKTRIGNGAATKAGGHDVHGAP 304 (711)
T ss_dssp ETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHTT---CSSCEEEEEEC-------------------
T ss_pred ccccchhhhc-CCCHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHHh---CCCCEEEEEccccccCCCCCCCcccccCCC
Confidence 9988776553 5678775 59999998 899999999998887653 289999999999999998544332333
Q ss_pred -ChhhHHhH
Q 018037 307 -TRDEISGV 314 (362)
Q Consensus 307 -~~~e~~~~ 314 (362)
+++|++..
T Consensus 305 l~~e~~~~~ 313 (711)
T 3uk1_A 305 LGADEIAKT 313 (711)
T ss_dssp -CHHHHHHH
T ss_pred CCHHHHHHH
Confidence 45565554
No 22
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.89 E-value=2.6e-22 Score=212.07 Aligned_cols=149 Identities=25% Similarity=0.288 Sum_probs=123.7
Q ss_pred CcccCCccccchhHHHHHHHHHHhhCCC----------CCeEEEEeCCcccccchHHHHHHHHHhCCCC-eEEEEEcCCc
Q 018037 164 GFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (362)
Q Consensus 164 ~~~~~~g~lG~~~p~A~G~A~A~k~~~~----------~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LP-vIfVv~NN~~ 232 (362)
++..++|++|+++|+|+|+|+|.++.+. ++.|||++|||++++|.+||++++|+.++|| +|+|++||+|
T Consensus 134 gv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~ 213 (690)
T 3m49_A 134 GVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSNDI 213 (690)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSB
T ss_pred ccccCCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCCe
Confidence 5667899999999999999999986542 7899999999999999999999999999998 7899999999
Q ss_pred ccccccccccCCchHhhh--cCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCCCCC---
Q 018037 233 GMGTAEWRAAKSPSYYKR--GDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYR--- 306 (362)
Q Consensus 233 gi~t~~~~~~~~~~~~~~--g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs~~D~~~~YR--- 306 (362)
+|+.+..... .+++.++ +||+++++| ||+|++++.+++++|++. .++|+||+++|+|.+|++...+...|.
T Consensus 214 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~v~DG~d~~~l~~Al~~a~~~--~~~P~lI~v~T~kG~G~~~~~~~~~~Hg~~ 290 (690)
T 3m49_A 214 SLDGDLNRSF-SESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEAKAD--EKRPTLIEVRTTIGFGSPNKSGKSASHGSP 290 (690)
T ss_dssp CSSSBGGGTC-CCCHHHHHHHHTCEEEEESCTTCHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTCTTTTTSGGGTSSC
T ss_pred ecccchhhcc-chhHHHHHHHcCCcEEEEecCCCHHHHHHHHHHHHhc--CCCCEEEEEEeecccccCcccCcccccCCC
Confidence 9988776543 4677774 599999999 999999999999888751 289999999999999998544332222
Q ss_pred -ChhhHHhHh
Q 018037 307 -TRDEISGVR 315 (362)
Q Consensus 307 -~~~e~~~~~ 315 (362)
+++|++..+
T Consensus 291 ~~~e~~~~~~ 300 (690)
T 3m49_A 291 LGVEETKLTK 300 (690)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 455666543
No 23
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.87 E-value=8.8e-23 Score=213.11 Aligned_cols=162 Identities=17% Similarity=0.218 Sum_probs=124.0
Q ss_pred CCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCC-ccccccc--------
Q 018037 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAE-------- 238 (362)
Q Consensus 168 ~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~-~gi~t~~-------- 238 (362)
+.|+||+++|.|+|++++. ++++|||++|||+++++ +++|++|+.+++|+++||.||+ |++.+..
T Consensus 418 ~~g~~G~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~ 491 (603)
T 4feg_A 418 LFATMGVGIPGAIAAKLNY----PERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQND 491 (603)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSC
T ss_pred ccccccchhHHHhhHHHhC----CCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCC
Confidence 4689999999999999986 57899999999999886 5559999999999887777775 8863211
Q ss_pred --ccccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEE---ecCCCCCCCCCCCCCCChh--
Q 018037 239 --WRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDT---YRYHGHSMSDPGSTYRTRD-- 309 (362)
Q Consensus 239 --~~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~t---yR~~GHs~~D~~~~YR~~~-- 309 (362)
......+||.++ +||+++++|+ +++++.+++++|++. ..+||+|||+.| +|+.+|...|+++.||..+
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~-~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (603)
T 4feg_A 492 FIGVEFNDIDFSKIADGVHMQAFRVN--KIEQLPDVFEQAKAI-AQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIE 568 (603)
T ss_dssp CCSSBCCCCCHHHHHHHTTCEEEEEC--BGGGHHHHHHHHHHH-TTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHHHH
T ss_pred cccCcCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHHh-cCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHHHH
Confidence 112234678875 5999999998 456788888777621 129999999999 6667888888888888665
Q ss_pred hHHhHhhcCCHHHHHHHHHHHcCCCCHHHH
Q 018037 310 EISGVRQERDPIERIRKLILAHDLATEKEL 339 (362)
Q Consensus 310 e~~~~~~~~DPi~~~~~~L~~~g~~t~~el 339 (362)
++.+|. .+||+.+|+++|.++|+|++++.
T Consensus 569 ~~~~~~-~~d~~~~~~~~l~~~g~~~~~~~ 597 (603)
T 4feg_A 569 AFKQRY-EAQDLQPLSTYLKQFGLDDLQHQ 597 (603)
T ss_dssp HHHHHH-TCTTCCCHHHHHHHTTC------
T ss_pred HHHhhC-CcccCCchHHHHHHcCCchhhhh
Confidence 566665 58999999999999999998764
No 24
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.63 E-value=4.5e-16 Score=162.02 Aligned_cols=120 Identities=16% Similarity=0.225 Sum_probs=98.5
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Ccccccccccc----
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEWRA---- 241 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~~~---- 241 (362)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++.......
T Consensus 410 ~~~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~ 483 (590)
T 1v5e_A 410 PLFATMGIAIPGGLGAKNTY----PDRQVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKN 483 (590)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCS
T ss_pred CCCCcccChHHHHHHHHHhC----CCCeEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCC
Confidence 35799999999999999996 57889999999999886 477999999999987666555 78887543211
Q ss_pred -----cCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCC
Q 018037 242 -----AKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (362)
Q Consensus 242 -----~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~ 294 (362)
...+||.+. +||+++++|+ +++++.+++++|++.+|++||+|||+.|+|..
T Consensus 484 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~gp~liev~~~~~~ 541 (590)
T 1v5e_A 484 LFGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMDRVMAEAVAANKAGHTVVIDCKITQDR 541 (590)
T ss_dssp CCCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHHHHHHHHHHHHHTTCCEEEEEECCSCC
T ss_pred CccccCCCCCHHHHHHHcCCEEEEEC--CHHHHHHHHHHHHHhcCCCCCEEEEEEecccc
Confidence 134688875 5999999997 68899999999998766689999999999864
No 25
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.61 E-value=5.6e-16 Score=161.94 Aligned_cols=120 Identities=24% Similarity=0.255 Sum_probs=97.0
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Cccccccccc-----
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEWR----- 240 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~~----- 240 (362)
+++|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++......
T Consensus 439 g~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 512 (616)
T 2pan_A 439 GQAGPLGWTIPAALGVCAAD----PKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMD 512 (616)
T ss_dssp TTTCCTTCHHHHHHHHHHHC----TTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCC
T ss_pred CCcccccchHHHHHHHHHhC----CCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCC
Confidence 45799999999999999996 57899999999999875 457999999999986665555 5887543210
Q ss_pred -----------ccC----CchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCC
Q 018037 241 -----------AAK----SPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYH 294 (362)
Q Consensus 241 -----------~~~----~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR~~ 294 (362)
... .+||.+. +||+++++|+ +++++.+++++|++++++ +||+|||+.|+|..
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 513 YCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp CSCBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred ccccccccccccccCCCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 011 2578774 5999999997 577999999999997776 99999999999866
No 26
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.59 E-value=9.6e-16 Score=157.24 Aligned_cols=112 Identities=30% Similarity=0.408 Sum_probs=89.8
Q ss_pred ccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Cccccccccc--------
Q 018037 170 GIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEWR-------- 240 (362)
Q Consensus 170 g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~~-------- 240 (362)
|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++.+....
T Consensus 401 g~~G~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~ 474 (528)
T 1q6z_A 401 GGLGFALPAAIGVQLAE----PERQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVP 474 (528)
T ss_dssp CCTTSHHHHHHHHHHHC----TTSCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCC
T ss_pred ccccchHHHHHHHHHhC----CCCcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcc
Confidence 99999999999999996 56789999999999887 677999999999988777666 5888654311
Q ss_pred --ccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 241 --AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 241 --~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
....+||.+. +||+++++|+ +.+++.+++++|++. +||+|||+.|.|
T Consensus 475 ~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~ 525 (528)
T 1q6z_A 475 GLDVPGIDFRALAKGYGVQALKAD--NLEQLKGSLQEALSA---KGPVLIEVSTVS 525 (528)
T ss_dssp SCBCCCCCHHHHHHHHTCEEEEES--SHHHHHHHHHHHHTC---SSCEEEEEEBCC
T ss_pred cCCCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHHC---CCcEEEEEEecC
Confidence 0134678774 5999999998 466887777766542 899999999976
No 27
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.58 E-value=1.5e-15 Score=156.95 Aligned_cols=117 Identities=21% Similarity=0.238 Sum_probs=93.6
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEE-cCCcccccccc------
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEW------ 239 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~-NN~~gi~t~~~------ 239 (362)
++.|+||+++|.|+|+++|.| ++++.|||++|||+++++ +++|++|+.+++|+++||. ||+|++.....
T Consensus 416 ~g~g~~G~~l~~AiGaa~a~~--~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 491 (563)
T 2uz1_A 416 GYLGSMGVGFGTALGAQVADL--EAGRRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGP 491 (563)
T ss_dssp CTTCCTTTHHHHHHHHHHHHH--HHTCEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCT
T ss_pred CCCccccChHHHHHHHHHHhh--CCCCeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCC
Confidence 346999999999999999986 567899999999999886 4569999999999866555 55688765421
Q ss_pred -ccc----CCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 240 -RAA----KSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 240 -~~~----~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
+.. ..+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|++
T Consensus 492 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~ 546 (563)
T 2uz1_A 492 NRVTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQALAH---NRPACINVAVAL 546 (563)
T ss_dssp TCCCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHHS---SSCEEEEEECCS
T ss_pred CcccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHHC---CCCEEEEEEecc
Confidence 111 34678774 5999999996 688999988888763 899999999974
No 28
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.57 E-value=1.6e-15 Score=157.09 Aligned_cols=116 Identities=17% Similarity=0.199 Sum_probs=92.5
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Ccccccccc------
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~------ 239 (362)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++.....
T Consensus 417 ~g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 490 (566)
T 1ozh_A 417 NGQQTMGVALPWAIGAWLVN----PERKVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQR 490 (566)
T ss_dssp CTTCCTTCHHHHHHHHHHHS----TTSEEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSS
T ss_pred CCcccccchHHHHHHHHHhC----CCCCEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCC
Confidence 35799999999999999996 57899999999999874 456999999999987666555 688765332
Q ss_pred ---cccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecC
Q 018037 240 ---RAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (362)
Q Consensus 240 ---~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~ 293 (362)
.....+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|+|.
T Consensus 491 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~liev~~~~~ 544 (566)
T 1ozh_A 491 LSGVEFGPMDFKAYAESFGAKGFAVE--SAEALEPTLRAAMDV---DGPAVVAIPVDYR 544 (566)
T ss_dssp CCSCBCCCCCHHHHHHTTTSEEEECC--SGGGHHHHHHHHHHS---SSCEEEEEEBCCT
T ss_pred CccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEeCCC
Confidence 12234688874 5999999997 567888888888753 8999999999873
No 29
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.57 E-value=1.2e-15 Score=157.56 Aligned_cols=120 Identities=14% Similarity=0.091 Sum_probs=93.4
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Ccccccccc----c-
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW----R- 240 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~----~- 240 (362)
++.|+||+++|.|+|+|+|.+.++.++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++..... .
T Consensus 410 ~~~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 487 (563)
T 2vk8_A 410 VLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQY 487 (563)
T ss_dssp TTTCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred cchhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcchHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCc
Confidence 45799999999999999999877788999999999999874 566999999999987666555 588754321 1
Q ss_pred -ccCCchHhhh--cCCcc---eEEEeCCCHHHHHHHHH-HHHHHhccCCCEEEEEEEec
Q 018037 241 -AAKSPSYYKR--GDYVP---GLKVDGMDALAVKQACK-FAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 241 -~~~~~~~~~~--g~gi~---g~~VdG~D~~av~~a~~-~A~~~ar~~gP~lIe~~tyR 292 (362)
....+||.+. +||++ +++|+ +++++.++++ ++++. .++|+|||+.|++
T Consensus 488 ~~~~~~d~~~~a~a~G~~~~~~~~v~--~~~el~~al~~~a~~~--~~~p~liev~~~~ 542 (563)
T 2vk8_A 488 NEIQGWDHLSLLPTFGAKDYETHRVA--TTGEWDKLTQDKSFND--NSKIRMIEVMLPV 542 (563)
T ss_dssp GCCCCCCGGGHHHHTTCSSEEEEEEC--BHHHHHHHHTCTTTTS--CSSEEEEEEECCT
T ss_pred ccCCCCCHHHHHHHhCCCCCcEEEec--CHHHHHHHHHHHHHhC--CCCcEEEEEEeCc
Confidence 1134678774 59999 99997 5778877777 55431 1479999999976
No 30
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.56 E-value=4e-15 Score=154.77 Aligned_cols=119 Identities=20% Similarity=0.298 Sum_probs=94.2
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEE-EcCCcccccccc------
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW------ 239 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv-~NN~~gi~t~~~------ 239 (362)
+++|++|+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++|| +||+|++.....
T Consensus 423 g~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 496 (590)
T 1ybh_A 423 GGLGAMGFGLPAAIGASVAN----PDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKA 496 (590)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTT
T ss_pred CCcccccchHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCC
Confidence 45699999999999999996 57899999999999875 456999999999976555 555688754321
Q ss_pred ----cc--c------CCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCC
Q 018037 240 ----RA--A------KSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGH 296 (362)
Q Consensus 240 ----~~--~------~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GH 296 (362)
.. . ..+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|+|....
T Consensus 497 ~~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~liev~~~~~~~~ 562 (590)
T 1ybh_A 497 NRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQTMLDT---PGPYLLDVICPHQEHV 562 (590)
T ss_dssp CCCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHHHS---SSCEEEEEECCTTCCC
T ss_pred ccccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEecCCccc
Confidence 00 1 13578774 5999999996 688998888888764 8999999999987653
No 31
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.56 E-value=2.6e-15 Score=155.58 Aligned_cols=115 Identities=21% Similarity=0.262 Sum_probs=91.8
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Ccccccccc------
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~------ 239 (362)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++.....
T Consensus 433 ~g~g~mG~~l~~AiGaa~a~----~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 506 (573)
T 2iht_A 433 AGCSSFGYGIPAAIGAQMAR----PDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHR 506 (573)
T ss_dssp SSSCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSS
T ss_pred CCCcccccHHHHHHHHHHhC----CCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCC
Confidence 35699999999999999996 57889999999999875 467999999999986555555 588765421
Q ss_pred -----cccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 240 -----RAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 240 -----~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
.....+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|+|
T Consensus 507 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~ 561 (573)
T 2iht_A 507 SHDPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGAEL---GRPFLIEVPVNY 561 (573)
T ss_dssp CCGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHHTS---SSCEEEEEEBCC
T ss_pred CcCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEECCC
Confidence 12224678774 5999999996 678888888877642 899999999998
No 32
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.56 E-value=3.7e-15 Score=157.58 Aligned_cols=118 Identities=25% Similarity=0.341 Sum_probs=93.8
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEE-EcCCccccccccc-----
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEWR----- 240 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv-~NN~~gi~t~~~~----- 240 (362)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ + ++|++|+.+++|+++|| +||+|++......
T Consensus 510 g~~G~mG~~lpaAiGaalA~----p~~~Vv~i~GDGsf~~~-~-~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~ 583 (677)
T 1t9b_A 510 GGLGTMGYGLPAAIGAQVAK----PESLVIDIDGDASFNMT-L-TELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEH 583 (677)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH-G-GGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTT
T ss_pred CCcchhhchHHHHHHHHHhC----CCCeEEEEEeehHHhcc-H-HHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCC
Confidence 45689999999999999995 67899999999999874 4 45999999999986555 5556887543211
Q ss_pred -----ccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCC
Q 018037 241 -----AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHG 295 (362)
Q Consensus 241 -----~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~G 295 (362)
....+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|+|...
T Consensus 584 ~~~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~lIev~~~~~~~ 640 (677)
T 1t9b_A 584 RYSHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVST---KGPVLLEVEVDKKVP 640 (677)
T ss_dssp CCCSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHHC---SSCEEEEEEBCSSCC
T ss_pred CcccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHHC---CCcEEEEEEecCCcc
Confidence 1134688874 5999999996 688998888888753 899999999998654
No 33
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.55 E-value=3.6e-15 Score=155.11 Aligned_cols=119 Identities=23% Similarity=0.320 Sum_probs=94.9
Q ss_pred CCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Ccccccccc-------
Q 018037 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------- 239 (362)
Q Consensus 168 ~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~------- 239 (362)
+.|+||+++|.|+|+++|. +++.|||++|||+++++ .++|++|+.+++|+++||.|| +|++.....
T Consensus 422 g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 495 (589)
T 2pgn_A 422 AEGILGCGFPMALGAQLAE----PNSRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQN 495 (589)
T ss_dssp TTCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CcchhhhHHHHHHHHHHhC----CCCcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCC
Confidence 4699999999999999996 57889999999999885 477999999999987665555 588765432
Q ss_pred --cccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCC
Q 018037 240 --RAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHS 297 (362)
Q Consensus 240 --~~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~GHs 297 (362)
.....+||.+. +||+++++|++ ++++.+++++|++. +||+|||+.|+|..+..
T Consensus 496 ~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~a~~~---~gp~liev~~~~~~~~~ 552 (589)
T 2pgn_A 496 NWTEFMNPDWVGIAKAFGAYGESVRE--TGDIAGALQRAIDS---GKPALIEIPVSKTQGLA 552 (589)
T ss_dssp CSCBCCCCCHHHHHHHHTCEEEECTT--TCCHHHHHHHHHHH---CSCEEEEEECCSSSSTT
T ss_pred ccccCCCCCHHHHHHHCCCeEEEECC--HHHHHHHHHHHHhC---CCCEEEEEEecCCCCcC
Confidence 11234688874 59999999974 55888888888764 99999999999876543
No 34
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.54 E-value=5.1e-15 Score=153.17 Aligned_cols=116 Identities=22% Similarity=0.291 Sum_probs=92.1
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEE-EEcCCccccccccc----c
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILV-CENNHYGMGTAEWR----A 241 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfV-v~NN~~gi~t~~~~----~ 241 (362)
++.|+||+++|.|+|+++|. +++.||+++|||+++++ +++|++|+.+++|+++| ++||+|++...... .
T Consensus 406 ~~~g~mG~~l~~A~G~ala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 479 (566)
T 2vbi_A 406 MQWGHIGWSVPSAFGNAMGS----QDRQHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNY 479 (566)
T ss_dssp TTTCCTTTHHHHHHHHHHTC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGC
T ss_pred CcccchhhHHHHHHHHHHhC----CCCcEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccC
Confidence 45799999999999999985 57899999999999874 45599999999997655 55557988655431 1
Q ss_pred cCCchHhhh--cCCc-----ceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 242 AKSPSYYKR--GDYV-----PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 242 ~~~~~~~~~--g~gi-----~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
...+||.+. +||+ ++++|+ +++++.+++++|++. .+||+|||+.|+|
T Consensus 480 ~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~~--~~gp~liev~~~~ 533 (566)
T 2vbi_A 480 IKNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIARAKAN--TRGPTLIECQIDR 533 (566)
T ss_dssp CCCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHHHHHC--CSSCEEEEEECCT
T ss_pred CCCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHHHHhc--CCCcEEEEEEeCc
Confidence 234577764 5899 999997 688999999888762 1799999999987
No 35
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.53 E-value=5.8e-15 Score=152.09 Aligned_cols=115 Identities=17% Similarity=0.121 Sum_probs=89.3
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Ccccccccc------
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~~------ 239 (362)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|.+|+.+++|+++||.|| +|++.....
T Consensus 405 ~~~g~mG~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 478 (552)
T 1ovm_A 405 PLWGSIGYTLAAAFGAQTAC----PNRRVIVLTGDGAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRY 478 (552)
T ss_dssp TTTCCTTHHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred hhhHhhhhHHHHHHHHHHhC----CCCcEEEEECchHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCc
Confidence 45799999999999999996 57889999999998874 556999999999977665555 588764321
Q ss_pred cccCCchHhhh--cCCc----ceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 240 RAAKSPSYYKR--GDYV----PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 240 ~~~~~~~~~~~--g~gi----~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
.....+||.+. +||+ ++++|+ +++++.+++++|++ .+||+|||+.|++
T Consensus 479 ~~~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~ 532 (552)
T 1ovm_A 479 NDIALWNWTHIPQALSLDPQSECWRVS--EAEQLADVLEKVAH---HERLSLIEVMLPK 532 (552)
T ss_dssp GCCCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHHHHHHHHTT---CSSEEEEEEECCT
T ss_pred ccCCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEcCc
Confidence 11234678774 5999 899997 57788777776643 2899999999976
No 36
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.53 E-value=1.4e-14 Score=149.37 Aligned_cols=117 Identities=20% Similarity=0.304 Sum_probs=90.3
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEE-EEcCCccccccccc-----
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILV-CENNHYGMGTAEWR----- 240 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfV-v~NN~~gi~t~~~~----- 240 (362)
++.|+||+++|.|+|+++|. +++.||+++|||+++++ .++|++|+.+++|+++| ++||+||+.+....
T Consensus 403 ~~~g~mG~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~ 476 (549)
T 3eya_A 403 FNHGSMANAMPQALGAQATE----PERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYL 476 (549)
T ss_dssp TTTCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC----------
T ss_pred CCCchhhhHHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCC
Confidence 35689999999999999986 57889999999998775 45699999999997655 55556887432211
Q ss_pred ----ccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCC
Q 018037 241 ----AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (362)
Q Consensus 241 ----~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~ 294 (362)
....+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|.+..
T Consensus 477 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~~~ 531 (549)
T 3eya_A 477 TDGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAFSI---DGPVLVDVVVAKEE 531 (549)
T ss_dssp --CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHHHS---SSCEEEEEEBCCCC
T ss_pred CcCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEecccc
Confidence 1134678774 5999999996 667888888887764 99999999998754
No 37
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.53 E-value=8.2e-15 Score=151.64 Aligned_cols=116 Identities=22% Similarity=0.259 Sum_probs=92.4
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEE-EEEcCCccccccccc----c
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAIL-VCENNHYGMGTAEWR----A 241 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIf-Vv~NN~~gi~t~~~~----~ 241 (362)
++.|+||+++|.|+|+++|. +++.||+++|||+++++ +++|++|+.+++|+++ |++||+|++...... .
T Consensus 410 ~~~g~~G~~l~~A~G~ala~----~~~~vv~i~GDGs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 483 (568)
T 2wvg_A 410 MQWGHIGWSVPAAFGYAVGA----PERRNILMVGDGSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNN 483 (568)
T ss_dssp TTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGC
T ss_pred CCcchhhhHHHHHHHHHHhC----CCCcEEEEEcChhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcC
Confidence 45789999999999999996 57899999999999873 4559999999999765 556667988655431 1
Q ss_pred cCCchHhhh--cCCc---------ceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 242 AKSPSYYKR--GDYV---------PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 242 ~~~~~~~~~--g~gi---------~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
...+||.+. +||+ ++++|+ +.+++.+++++|++. .+||+|||+.|+|
T Consensus 484 ~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~el~~al~~a~~~--~~gp~liev~~~~ 541 (568)
T 2wvg_A 484 IKNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGGELAEAIKVALAN--TDGPTLIECFIGR 541 (568)
T ss_dssp CCCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHHHHHHHHHHHHHC--CSSCEEEEEECCT
T ss_pred CCCCCHHHHHHHhCCCcccccCCcceEEeC--CHHHHHHHHHHHHhc--CCCcEEEEEEcCc
Confidence 234578774 4888 899996 678999999988763 2799999999987
No 38
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.52 E-value=1.3e-14 Score=150.22 Aligned_cols=115 Identities=18% Similarity=0.146 Sum_probs=90.0
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEE-EcCCcccccccc------
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW------ 239 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv-~NN~~gi~t~~~------ 239 (362)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++|| +||+|++.....
T Consensus 422 ~~~g~mG~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 495 (570)
T 2vbf_A 422 PLWGSIGYTFPAALGSQIAD----KESRHLLFIGDGSLQLT--VQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSY 495 (570)
T ss_dssp TTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred ccchhhhhhHHHHHHHHHhC----CCCcEEEEEcchhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCc
Confidence 56799999999999999996 57899999999999874 455999999999976555 555798765332
Q ss_pred cccCCchHhhh--cCCcc-----eEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEec
Q 018037 240 RAAKSPSYYKR--GDYVP-----GLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYR 292 (362)
Q Consensus 240 ~~~~~~~~~~~--g~gi~-----g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR 292 (362)
.....+||.+. +||++ +++|+ +++++.++++++. ++ +||+|||+.|+|
T Consensus 496 ~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~---~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 496 NDIPMWNYSKLPETFGATEDRVVSKIVR--TENEFVSVMKEAQ---ADVNRMYWIELVLEK 551 (570)
T ss_dssp GCCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHHHHHHHHHHH---HCTTSEEEEEEECCT
T ss_pred cCCCCCCHHHHHHHcCCCcCCcceEEec--CHHHHHHHHHHHH---hcCCCcEEEEEEcCc
Confidence 11234678774 59998 78996 5788888887742 23 899999999986
No 39
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.51 E-value=1.1e-14 Score=150.82 Aligned_cols=115 Identities=19% Similarity=0.170 Sum_probs=90.9
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEE-EcCCcccccccc-----c
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW-----R 240 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv-~NN~~gi~t~~~-----~ 240 (362)
++.|+||+++|.|+|+|+|. +++.|||++|||++++ .+++|++|+.+++|+++|| +||+|++..... .
T Consensus 419 ~~~g~mG~~l~~A~G~ala~----~~~~vv~i~GDG~~~~--~~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 492 (565)
T 2nxw_A 419 GYYAGMGFGVPAGIGAQCVS----GGKRILTVVGDGAFQM--TGWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFN 492 (565)
T ss_dssp TTTCCTTCHHHHHHHHHHHT----TTCCEEEEEEHHHHHH--HGGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGG
T ss_pred CccccccccchHHHHHHHhC----CCCcEEEEEechHHHh--hHHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCC
Confidence 34689999999999999996 5788999999999884 4567999999999976555 555688754321 1
Q ss_pred ccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCE-EEEEEEec
Q 018037 241 AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPM-ILEMDTYR 292 (362)
Q Consensus 241 ~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~-lIe~~tyR 292 (362)
....+||.+. +||+++++|+ +++++.+++++|++. +||+ |||+.|+|
T Consensus 493 ~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~~liev~~~~ 542 (565)
T 2nxw_A 493 DLDDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFAT---RGRFQLIEAMIPR 542 (565)
T ss_dssp BCCCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred cCCCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHhc---CCCeEEEEEEccc
Confidence 2234688874 5999999997 678998888888753 7898 99999976
No 40
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.51 E-value=3.6e-14 Score=146.84 Aligned_cols=115 Identities=17% Similarity=0.121 Sum_probs=91.1
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCC-c-cccccc---cc-
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-Y-GMGTAE---WR- 240 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~-~-gi~t~~---~~- 240 (362)
++.|+||+++|.|+|+++| +++.||+++|||++++. .++|++|+.+++|+++||.||+ | ++...+ ..
T Consensus 423 g~~g~~G~~l~~AiGaala-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 495 (568)
T 2c31_A 423 GTWGVMGIGMGYCVAAAAV-----TGKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVI 495 (568)
T ss_dssp TTTTCSSCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBC
T ss_pred CCCccccccHHHHHHHHhC-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCc
Confidence 5679999999999999998 46789999999998763 4559999999999887777776 4 433211 00
Q ss_pred ---ccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecC
Q 018037 241 ---AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (362)
Q Consensus 241 ---~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~ 293 (362)
....+||.+. +||+++++|+ +++++.+++++|++. ++|+|||+.|+|.
T Consensus 496 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~~p~liev~~~~~ 548 (568)
T 2c31_A 496 SCTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVAS---GKPCLINAMIDPD 548 (568)
T ss_dssp CTTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHHH---TSCEEEEEEBCTT
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEeccc
Confidence 0234688874 5999999996 688999999888754 8999999999874
No 41
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.49 E-value=7.7e-14 Score=144.14 Aligned_cols=116 Identities=17% Similarity=0.180 Sum_probs=90.9
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCC-c-cccccc---c-c
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-Y-GMGTAE---W-R 240 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~-~-gi~t~~---~-~ 240 (362)
++.|++|+++|.|+|+++| +++.||+++|||++++. + ++|.+|+.+++|+++||.||+ | ++.... . +
T Consensus 418 g~~g~~G~~l~~AiGaa~a-----~~~~vv~i~GDGsf~~~-~-~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 490 (564)
T 2q28_A 418 GTWGVMGIGMGYAIGASVT-----SGSPVVAIEGDSAFGFS-G-MEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGA 490 (564)
T ss_dssp TTTTCTTCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT-G-GGHHHHHHTTCCEEEEEEECSBSSCSCCCCTTSSCC
T ss_pred CCCCcccchHHHHHHHhhc-----CCCcEEEEEcchHhhcc-H-HHHHHHHHhCCCeEEEEEeCchhHHHHHHHHhccCC
Confidence 5679999999999999998 46889999999998774 3 559999999999887777775 4 443211 0 0
Q ss_pred -----ccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCC
Q 018037 241 -----AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (362)
Q Consensus 241 -----~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~~ 294 (362)
....+||.+. +||+++++|+ +++++.+++++|++. ++|+|||+.|+|..
T Consensus 491 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~~p~liev~~~~~~ 546 (564)
T 2q28_A 491 PSPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGIQS---RKPTIINVVIDPAA 546 (564)
T ss_dssp CCTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHHHH---TSCEEEEEEBCTTS
T ss_pred ccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEecccc
Confidence 1124678774 5999999996 688999999888754 89999999998754
No 42
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.46 E-value=3.2e-14 Score=147.02 Aligned_cols=113 Identities=19% Similarity=0.145 Sum_probs=82.5
Q ss_pred cCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCC-ccccccc-------
Q 018037 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAE------- 238 (362)
Q Consensus 167 ~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~-~gi~t~~------- 238 (362)
+..|++|+ +|.|+|+++| +++.|||++|||++.+. +.| |++|+.+++|+++||.||+ |++....
T Consensus 414 g~~g~~G~-l~~A~Gaa~a-----~~~~vv~i~GDGsf~~~-~~e-L~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~ 485 (556)
T 3hww_A 414 GASGIDGL-LSTAAGVQRA-----SGKPTLAIVGDLSALYD-LNA-LALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSER 485 (556)
T ss_dssp SSCCSSSH-HHHHHHHHHH-----HCCCEEEEEEHHHHHHT-GGG-HHHHTTCSSCEEEEEEESCC--------------
T ss_pred cccccccH-HHHHHHHHhc-----CCCcEEEEEccHHhhhc-chh-hHhhcccCCCcEEEEEECCCCCcccCCCCcchhH
Confidence 45677888 9999999998 26789999999998764 444 9999999999887777776 5664321
Q ss_pred cc---ccCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 239 WR---AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 239 ~~---~~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
.. ....+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|++
T Consensus 486 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~ 539 (556)
T 3hww_A 486 ERFYLMPQNVHFEHAAAMFELKYHRPQ--NWQELETAFADAWRT---PTTTVIEMVVND 539 (556)
T ss_dssp ---CCCCCCCCSHHHHHHTTCEEECCS--SHHHHHHHHHHHTTS---SSEEEEEEECCS
T ss_pred HHhccCCCCCCHHHHHHHcCCcEEecC--CHHHHHHHHHHHHhC---CCCEEEEEECCc
Confidence 11 1135688874 5999999996 567887777666532 899999998865
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.42 E-value=4.4e-14 Score=147.31 Aligned_cols=112 Identities=14% Similarity=0.032 Sum_probs=85.3
Q ss_pred CccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEE-EcCCcccccccc--------
Q 018037 169 HGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW-------- 239 (362)
Q Consensus 169 ~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv-~NN~~gi~t~~~-------- 239 (362)
.+.+|+++|.|+|+++|. ++.|||++|||+++++ +. +|++|+.+++|+++|| +||+|++.....
T Consensus 454 ~~~ig~~l~~AiGaala~-----~~~vv~i~GDGsf~~~-~~-eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~ 526 (604)
T 2x7j_A 454 ANGIDGVVSSAMGVCEGT-----KAPVTLVIGDLSFYHD-LN-GLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHF 526 (604)
T ss_dssp TCCSSSHHHHHHHHHHHH-----TSCEEEEEEHHHHHHT-GG-GGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHH
T ss_pred cCCcCcHHHHHHHHHhcC-----CCcEEEEEccHHHHhH-HH-HHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchhh
Confidence 467899999999999994 5789999999999885 44 4999999999986555 555788743221
Q ss_pred -cc---cCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018037 240 -RA---AKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (362)
Q Consensus 240 -~~---~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR 292 (362)
+. ...+||.+. +||+++++|+ +++++.+++++|++ .+||+|||+.|+|
T Consensus 527 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~liev~~~~ 580 (604)
T 2x7j_A 527 EDLFGTPTGLDFKHAAALYGGTYSCPA--SWDEFKTAYAPQAD---KPGLHLIEIKTDR 580 (604)
T ss_dssp HHHTTCCCCCCTHHHHHHTTCEEECCS--SHHHHHHHCCCCCS---SCCEEEEEEECCH
T ss_pred HhhccCCCCCCHHHHHHHcCCeEEecC--CHHHHHHHHHHHHh---CCCCEEEEEECCc
Confidence 11 124678774 5999999997 57787776665543 2899999999865
No 44
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.36 E-value=3.4e-13 Score=139.94 Aligned_cols=108 Identities=18% Similarity=0.102 Sum_probs=73.6
Q ss_pred cchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC-Cccccccc--cc-------c-
Q 018037 173 GAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAE--WR-------A- 241 (362)
Q Consensus 173 G~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN-~~gi~t~~--~~-------~- 241 (362)
|+++|.|+|+|+ +++.|||++|||++++. + ++|++|+++++|+++||.|| +||+.... .. .
T Consensus 439 ~g~l~~AiGaa~------~~~~vv~i~GDGsf~~~-~-~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~~ 510 (578)
T 3lq1_A 439 DGVVSSALGASV------VFQPMFLLIGDLSFYHD-M-NGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLF 510 (578)
T ss_dssp SSHHHHHHHHTT------TSSSEEEEEEHHHHHHT-G-GGGHHHHHTTCCEEEEEECCC---------------------
T ss_pred ccHHHHHHHHhc------CCCCEEEEEchHHHHhh-H-HHHHhhccCCCCeEEEEEECCcCccccccccccccchhhhhc
Confidence 346999999963 47889999999998764 3 44999999999988776666 57875421 10 0
Q ss_pred --cCCchHhhh--cCCcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecC
Q 018037 242 --AKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (362)
Q Consensus 242 --~~~~~~~~~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~ 293 (362)
...+||.+. +||+++++|+ +++++.+++++|++. +||+|||+.|.+.
T Consensus 511 ~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~liev~~~~~ 561 (578)
T 3lq1_A 511 GTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKASYH---KGLDIIEVKTNRH 561 (578)
T ss_dssp ----CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHHTTS---SSEEEEEEC----
T ss_pred cCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHHHhC---CCCEEEEEECCcc
Confidence 124578774 5999999996 678888777776543 9999999988763
No 45
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.35 E-value=2.9e-12 Score=136.96 Aligned_cols=135 Identities=18% Similarity=0.185 Sum_probs=109.6
Q ss_pred cCCccCCCCcccCCccccchhHHHHHHHHHHhhCCCCCeEEEEeCCcccccch---HHHHHHHHHhCCCC-eEEEEEcCC
Q 018037 156 MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQ---LFEALNIAALWDLP-AILVCENNH 231 (362)
Q Consensus 156 ~H~~~~~~~~~~~~g~lG~~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~---~~Ealn~A~~~~LP-vIfVv~NN~ 231 (362)
.|....-.++...+|.||++++.|+|+|+ .+++..|+|++|||..++|. .||+.+++..+++. +|.|+++|+
T Consensus 161 gHp~~~tpGve~~tG~LGqGls~AvG~A~----~~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~D~N~ 236 (845)
T 3ahc_A 161 SHFAPETPGSIHEGGELGYALSHAYGAVM----NNPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPILHLNG 236 (845)
T ss_dssp SSCCTTSTTCSCCCSSTTCHHHHHHHHHT----TCTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEEEECS
T ss_pred CCCCCCCCCeecCCCCccchHhHHhhhhh----cCCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEEECCC
Confidence 35533234778889999999999999995 45788999999999999999 99999999999998 578899999
Q ss_pred ccccccccccc-CCchHhh--hcCCcceE-EEeC-C--CHHHHHHHHHHHHHH-----------hcc---CCC--EEEEE
Q 018037 232 YGMGTAEWRAA-KSPSYYK--RGDYVPGL-KVDG-M--DALAVKQACKFAKEH-----------ALK---NGP--MILEM 288 (362)
Q Consensus 232 ~gi~t~~~~~~-~~~~~~~--~g~gi~g~-~VdG-~--D~~av~~a~~~A~~~-----------ar~---~gP--~lIe~ 288 (362)
+.|..++.... ...++.+ ++||...+ .||| + |++++.+++.+|++. +++ ++| .+|.+
T Consensus 237 ~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~Ii~ 316 (845)
T 3ahc_A 237 YKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPMLIF 316 (845)
T ss_dssp BSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEEEE
T ss_pred CcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEEEE
Confidence 99988775432 2345555 46888888 8999 9 999999888766632 332 589 99999
Q ss_pred EEecCC
Q 018037 289 DTYRYH 294 (362)
Q Consensus 289 ~tyR~~ 294 (362)
+|.+.+
T Consensus 317 rT~kG~ 322 (845)
T 3ahc_A 317 RTPKGW 322 (845)
T ss_dssp ECCTTT
T ss_pred ECcccC
Confidence 999999
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=98.93 E-value=2.3e-09 Score=119.70 Aligned_cols=97 Identities=12% Similarity=0.025 Sum_probs=73.2
Q ss_pred CCeEEEEeCCc-ccccchHHHHHHHHHhCCCCeEEEEEcCC-ccccccccccc----------------CCchHhh--hc
Q 018037 192 ETVTFALYGDG-AANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEWRAA----------------KSPSYYK--RG 251 (362)
Q Consensus 192 ~~vvv~~~GDG-a~~~G~~~Ealn~A~~~~LPvIfVv~NN~-~gi~t~~~~~~----------------~~~~~~~--~g 251 (362)
++.||++.||| ++.+| +.| |.+|..+++|+++||.||+ ||+...+.... ..+||.. ++
T Consensus 953 ~~~Vv~i~GDG~~~~mg-~~e-L~ta~~~~~~v~iiVlnN~~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~a 1030 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIG-YGG-LDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVMT 1030 (1231)
T ss_dssp CCEEEEEEEHHHHHTTT-HHH-HHHHHHTTCSCEEEEEECSSBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHHT
T ss_pred CCcEEEEeCcHHHHHcc-hHH-HHHHHHhCCCeEEEEEECHHHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHHH
Confidence 47899999999 67877 455 9999999999877666665 78764322110 1257876 45
Q ss_pred CCcceEEE-eC-CCHHHHHHHHHHHHHHhccCCCEEEEEEEecC
Q 018037 252 DYVPGLKV-DG-MDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (362)
Q Consensus 252 ~gi~g~~V-dG-~D~~av~~a~~~A~~~ar~~gP~lIe~~tyR~ 293 (362)
||++++.+ .- .++.++.+++++|+++ +||+|||+.+.-.
T Consensus 1031 ~G~~~va~~~v~~~~~~l~~al~eAl~~---~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1031 YGYVYVATVSMGYSKQQFLKVLKEAESF---PGPSLVIAYATCI 1071 (1231)
T ss_dssp TSSSEEEEECTTTCHHHHHHHHHHHHHS---SSCEEEEEECCCG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHhc---CCCEEEEEeecCc
Confidence 99999864 33 4899999999999976 9999999996544
No 47
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=92.12 E-value=0.85 Score=46.76 Aligned_cols=104 Identities=16% Similarity=0.044 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhh-cCCc
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDYV 254 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~-g~gi 254 (362)
-+|.|.|.+. ++-.++++..|=|++|- .-++..|..-++|+|+|.-+-... ++.....+. .|.... .+--
T Consensus 57 ~~A~GyAr~t---g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q~--~d~~~~~~~tk 128 (589)
T 2pgn_A 57 WMVNGYNYVK---DRSAAVGAWHCVGNLLL---HAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQQ--VPWQSFTPIAR 128 (589)
T ss_dssp HHHHHHHHHH---TSCCEEEEEEGGGGGGC---HHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSSC--CCGGGGTTTSS
T ss_pred HHHHHHHHHH---CCCEEEEEecCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCCCCcccc--cChhhccccEE
Confidence 3566666553 45678999999999873 445777889999999988775542 221101111 122221 1222
Q ss_pred ceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018037 255 PGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (362)
Q Consensus 255 ~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (362)
...++ .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 129 ~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 164 (589)
T 2pgn_A 129 STQRV--ERLDKVGEAIHEAFRVAEGHPAGPAYVDIPF 164 (589)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHTSSSCCEEEEEEET
T ss_pred EEeec--CCHHHHHHHHHHHHHHHhcCCCccEEEEeCH
Confidence 23444 4778888999999988877 4999998864
No 48
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=91.74 E-value=0.21 Score=48.97 Aligned_cols=111 Identities=19% Similarity=0.145 Sum_probs=61.2
Q ss_pred hhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCc-cc--ccccccc-cCCchHhhh
Q 018037 175 QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHY-GM--GTAEWRA-AKSPSYYKR 250 (362)
Q Consensus 175 ~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~-gi--~t~~~~~-~~~~~~~~~ 250 (362)
.+.+|+|++++- .+.++...|.|-.. ..+.|..++..++|+|+++-+... +. ++..+.. .....|...
T Consensus 76 a~~~a~Gaa~aG-----~r~~~~ts~~G~~~---~~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~sd~~~~~~~~~ 147 (395)
T 1yd7_A 76 SIAAAIGASWAG-----AKAMTATSGPGFSL---MQENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGTH 147 (395)
T ss_dssp HHHHHHHHHHTT-----CCEEEEEETTHHHH---HTTTCC----CCCCEEEEEEC-------------------------
T ss_pred HHHHHHHHHHhC-----CcEEEEeCchHHHH---HHHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccchhHHHHHHhccC
Confidence 355677777652 45777888888854 244455667889999887776543 22 2222211 111111211
Q ss_pred c-CCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCC
Q 018037 251 G-DYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHS 297 (362)
Q Consensus 251 g-~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR~~GHs 297 (362)
+ +|++.+ .-.++.+++..+..|++.+++ +.|+++....+ + +|+
T Consensus 148 g~~g~~vl--~p~~~qea~~l~~~A~~lA~~~~~PVi~~~~~~-l-~h~ 192 (395)
T 1yd7_A 148 GDHSLIVL--SPSTVQEAFDFTIRAFNLSEKYRTPVILLTDAE-V-GHM 192 (395)
T ss_dssp -CCCCEEE--CCCSHHHHHHHHHHHHHHHHHHTSEEEEEECHH-H-HHC
T ss_pred CCcceEEE--eCCCHHHHHHHHHHHHHHHHHHCCCEEEEcchh-H-hCe
Confidence 2 455444 446899999999999988887 89999988765 2 454
No 49
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=90.59 E-value=0.66 Score=47.53 Aligned_cols=105 Identities=20% Similarity=0.163 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccccccccccCCchHhh--hcCC
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYK--RGDY 253 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~t~~~~~~~~~~~~~--~g~g 253 (362)
.-+|.|.|.+. ++-.++++..|=|++| ..-++..|...++|+|+|+-+-.........-+ ..|... +.+-
T Consensus 63 a~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~g~~~~Q--~~d~~~~~~~~~ 134 (590)
T 1ybh_A 63 VFAAEGYARSS---GKPGICIATSGPGATN---LVSGLADALLDSVPLVAITGQVPRRMIGTDAFQ--ETPIVEVTRSIT 134 (590)
T ss_dssp HHHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTTCTT--CCCHHHHHGGGS
T ss_pred HHHHHHHHHHH---CCCEEEEeccCchHHH---HHHHHHHHHhhCCCEEEEeCcCCccccCCCccc--ccCHHHHHHHHh
Confidence 34566776653 4456777778888777 345677788999999998876543211110011 112222 1122
Q ss_pred cceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018037 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (362)
Q Consensus 254 i~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (362)
-...++ .+++++.+.+++|+..+.. .||+.|++-.
T Consensus 135 k~~~~v--~~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 135 KHNYLV--MDVEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp SEEEEC--CCGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred CeEEec--CCHHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 223444 4788899999999988876 5999999864
No 50
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=89.83 E-value=0.83 Score=47.01 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhhcCCcc
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGDYVP 255 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~g~gi~ 255 (362)
-+|.|.|.+. ++-.++++..|=|++|- .-++..|..-++|+|+|+-+-... +.....+......+.. .+-..
T Consensus 64 ~aA~GyAr~t---g~~gv~~~TsGpG~~N~---~~gia~A~~~~vPvl~itG~~~~~~~~~~~~Q~~d~~~~~~-~~tk~ 136 (603)
T 4feg_A 64 MAAAADAKLT---GKIGVCFGSAGPGGTHL---MNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPIYA-DVADY 136 (603)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTTTTSCCTTCCCCGGGGT-TTCSE
T ss_pred HHHHHHHHHh---CCceEEEecCCchHHHH---HHHHHHHHHcCCCEEEEecCCcccccCCCccccccHHHHhh-hhceE
Confidence 4466666553 44567777778888873 455778889999999888653321 1111101000111111 11122
Q ss_pred eEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEE
Q 018037 256 GLKVDGMDALAVKQACKFAKEHALK-NGPMILEMD 289 (362)
Q Consensus 256 g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ 289 (362)
..+|. +++++.+.+.+|+..+.. .||++|++-
T Consensus 137 ~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP 169 (603)
T 4feg_A 137 NVTAV--NAATLPHVIDEAIRRAYAHQGVAVVQIP 169 (603)
T ss_dssp EEECC--CSTTHHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred EEEcC--CHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 23442 555666777777766666 899999985
No 51
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=89.82 E-value=0.82 Score=46.63 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhh--cCC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~--g~g 253 (362)
-+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|+-+-... ++.. ..+ ..|.... .+-
T Consensus 62 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~vPll~itg~~~~~~~~~~-~~Q--~~d~~~~~~~~t 132 (566)
T 1ozh_A 62 FMAAAVGRIT---GKAGVALVTSGPGCSN---LITGMATANSEGDPVVALGGAVKRADKAKQ-VHQ--SMDTVAMFSPVT 132 (566)
T ss_dssp HHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTC---------CCCHHHHHGGGC
T ss_pred HHHHHHHHHH---CCCEEEEEccChHHHH---HHHHHHHHHhcCCCEEEEeCCCccccCCCC-ccc--ccCHHHHHHHHh
Confidence 4566666553 4455677777888877 3455777888899999988765432 2211 111 1233221 122
Q ss_pred cceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018037 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (362)
Q Consensus 254 i~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~ty 291 (362)
....++ .+++++.+.+.+|+..+.. .||+.|++-..
T Consensus 133 k~~~~v--~~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 133 KYAIEV--TAPDALAEVVSNAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred heEEEc--CCHHHHHHHHHHHHHHHhcCCCCeEEEEeChh
Confidence 223455 4777888888999888776 59999998643
No 52
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=89.69 E-value=1.1 Score=45.78 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhh--cCC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~--g~g 253 (362)
-+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|+-+.... ++.....+ ..|.... .+-
T Consensus 62 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~v~~A~~~~~Pll~itg~~~~~~~~~~~~~Q--~~d~~~~~~~~~ 133 (573)
T 2iht_A 62 VAADVLARIT---GRPQACWATLGPGMTN---LSTGIATSVLDRSPVIALAAQSESHDIFPNDTHQ--CLDSVAIVAPMS 133 (573)
T ss_dssp HHHHHHHHHH---CSCEEEEECTTHHHHH---HHHHHHHHHHHTCCEEEEEEESCGGGCCTTTSTT--CCCHHHHHGGGS
T ss_pred HHHHHHHHHH---CCCEEEEEccCchHHH---HHHHHHHHHhhCCCEEEEcccCcccccCCcCccc--cCCHHHHHHhHh
Confidence 4566666543 4445677777777776 4556777888999999998776543 22201111 1233221 122
Q ss_pred cceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018037 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (362)
Q Consensus 254 i~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~ty 291 (362)
-...++ .+++++.+.+.+|+..+.. .||+.|++-..
T Consensus 134 k~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 171 (573)
T 2iht_A 134 KYAVEL--QRPHEITDLVDSAVNAAMTEPVGPSFISLPVD 171 (573)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHTBSSCCCEEEEEEHH
T ss_pred hEEEEc--CCHHHHHHHHHHHHHHHhcCCCceEEEEecch
Confidence 223445 4777888999999988877 49999998753
No 53
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=89.69 E-value=1 Score=45.89 Aligned_cols=105 Identities=19% Similarity=0.112 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhh--hcCC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK--RGDY 253 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~--~g~g 253 (362)
-+|.|.|.+. ++-.++++..|=|++|- .-++..|...++|+|+|+-+-... ++... .+.. .|... +.+-
T Consensus 55 ~~A~Gyar~t---g~p~v~~~TsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~~-~Q~~-~d~~~~~~~~t 126 (563)
T 2uz1_A 55 HAAEGYARAG---AKLGVALVTAGGGFTNA---VTPIANAWLDRTPVLFLTGSGALRDDETNT-LQAG-IDQVAMAAPIT 126 (563)
T ss_dssp HHHHHHHHHH---TSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTSCC-TTCC-CCHHHHHGGGC
T ss_pred HHHHHHHHHh---CCCEEEEEccCccHHHH---HHHHHHHHhcCCCEEEEeCCCCcccCCchh-hhhh-ccHHHHhhhhh
Confidence 4566766553 44456777777787773 445667888999999998775542 21111 1110 23322 1122
Q ss_pred cceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018037 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (362)
Q Consensus 254 i~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~ty 291 (362)
....++ .+++++.+.+.+|+..+.. .||+.|++-..
T Consensus 127 k~~~~v--~~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 127 KWAHRV--MATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp SEEEEC--CCGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred ceEEEc--CCHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 223455 4777888889999988876 49999998643
No 54
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=89.51 E-value=0.88 Score=47.68 Aligned_cols=102 Identities=19% Similarity=0.169 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhh--hcCC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK--RGDY 253 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~--~g~g 253 (362)
-+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|+-+-... ++... -+ ..|... +.+-
T Consensus 134 ~aAdGyAr~t---Gkpgvv~~TsGpG~~N---~~~gia~A~~d~vPllvItG~~~~~~~g~~a-~Q--~~Dq~~i~~~~t 204 (677)
T 1t9b_A 134 HMAEGYARAS---GKPGVVLVTSGPGATN---VVTPMADAFADGIPMVVFTGQVPTSAIGTDA-FQ--EADVVGISRSCT 204 (677)
T ss_dssp HHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTTTSCC-TT--CCCHHHHTGGGS
T ss_pred HHHHHHHHHH---CCCEEEEECCChHHHH---HHHHHHHHHHcCCCEEEEeCCCChhhcCCCC-cc--ccCHHHHhhhhe
Confidence 4566776653 4556777888888877 3445777888899999988765432 11110 01 112211 1122
Q ss_pred cceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEE
Q 018037 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMD 289 (362)
Q Consensus 254 i~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~ 289 (362)
-....| .+++++...+.+|+..+.. .||++|++-
T Consensus 205 k~~~~v--~~~~~i~~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 205 KWNVMV--KSVEELPLRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eEEEEc--CCHHHHHHHHHHHHHHHhhCCCceEEEEcC
Confidence 223445 4778899999999988876 589999986
No 55
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=89.34 E-value=1.2 Score=45.06 Aligned_cols=103 Identities=12% Similarity=0.003 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhh--cCC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~--g~g 253 (362)
-+|.|.|.+. ++-.++++..|=|++|- .-++..|..-+.|+|+|.-+-... ++... -+ ..|.... .+-
T Consensus 55 ~~A~GyAr~t---g~~~v~~~TsGpG~~N~---~~gi~~A~~~~vPvl~itg~~~~~~~~~~~-~Q--~~d~~~~~~~~t 125 (549)
T 3eya_A 55 FAAGAEAQLS---GELAVCAGSCGPGNLHL---INGLFDCHRNHVPVLAIAAHIPSSEIGSGY-FQ--ETHPQELFRECS 125 (549)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEESCGGGTTSCC-TT--CCCHHHHTSTTC
T ss_pred HHHHHHHHHh---CCCEEEEeCCCCcHhhh---HHHHHHHHhhCCCEEEEeCCCchhhcCCCC-CC--ccCHHHHHhhhh
Confidence 3466666553 44567777788888873 456778889999999988654321 11100 01 1122221 122
Q ss_pred cceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018037 254 VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (362)
Q Consensus 254 i~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (362)
-....+ .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 126 k~~~~v--~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 161 (549)
T 3eya_A 126 HYCELV--SSPEQIPQVLAIAMRKAVLNRGVSVVVLPG 161 (549)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHHTTSEEEEEEEH
T ss_pred heEEEe--CCHHHHHHHHHHHHHHHhhCCCCEEEEeCh
Confidence 223344 3677788888888887777 8999999853
No 56
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=88.94 E-value=2.1 Score=43.44 Aligned_cols=106 Identities=18% Similarity=0.152 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCccc-cccc--ccc--cCC-chHhh
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGM-GTAE--WRA--AKS-PSYYK 249 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi-~t~~--~~~--~~~-~~~~~ 249 (362)
.-+|.|.|.+. + -.++++..|=|++| ..-++..|...++|+|+|+-+-.... +... ... ... .|...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (568)
T 2wvg_A 54 GFSAEGYARAK---G-AAAAVVTYSVGALS---AFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLE 126 (568)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHhh---C-CeEEEEeCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHH
Confidence 34566776553 4 45677777878776 45567778899999999987655422 1110 000 001 12222
Q ss_pred h--cCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018037 250 R--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (362)
Q Consensus 250 ~--g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (362)
. .+-....++. +++++.+.+.+|+..+.. .||+.|++-.
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~ 168 (568)
T 2wvg_A 127 MAKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIAC 168 (568)
T ss_dssp HHTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred HHHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 1 1323345663 667777778888877777 8999999864
No 57
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=88.66 E-value=2.4 Score=43.93 Aligned_cols=100 Identities=15% Similarity=0.157 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCchHhhhcCC
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSPSYYKRGDY 253 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~~~~~~g~g 253 (362)
+++|+|+|++ |...++++.++++.. ..++.+.+++..++|+++++.+.+++.+ .+++. ...+..-. -.
T Consensus 368 v~~a~G~A~~----G~~~~~~~~f~~Fl~---~a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~--~~ed~a~l-~~ 437 (616)
T 3mos_A 368 VSIAVGCATR----NRTVPFCSTFAAFFT---RAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQM--ALEDLAMF-RS 437 (616)
T ss_dssp HHHHHHHHGG----GCCEEEEEEEGGGGG---GGHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGC--BSSHHHHH-HT
T ss_pred HHHHHHHHHc----CCCCEEEEehHHHHH---HHHHHHHHHHHhCCCeEEEEECCCccccCCCCccc--CHHHHHHh-cC
Confidence 3556677764 222466778999874 3566677888999999998887766433 22221 12222221 23
Q ss_pred cceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 254 VPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 254 i~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
+|++.| .=.|+.++..+++.|++. ++|++|-.
T Consensus 438 iP~l~V~~P~d~~e~~~~l~~a~~~---~gp~~ir~ 470 (616)
T 3mos_A 438 VPTSTVFYPSDGVATEKAVELAANT---KGICFIRT 470 (616)
T ss_dssp STTEEEECCCSHHHHHHHHHHHHTC---CSEEEEEC
T ss_pred CCCCEEEecCCHHHHHHHHHHHHhc---CCCEEEEE
Confidence 666655 446888888888887754 89987743
No 58
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=88.29 E-value=1.9 Score=43.83 Aligned_cols=106 Identities=19% Similarity=0.190 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-ccccc--ccc--cCC-chHhh
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE--WRA--AKS-PSYYK 249 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~--~~~--~~~-~~~~~ 249 (362)
.-+|.|.|.+. + -.++++..|=|++| ..-++..|...++|+|+|+-+-... ++... ... ... .|...
T Consensus 54 a~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~ 126 (566)
T 2vbi_A 54 GFSAEGYARSN---G-AAAAVVTFSVGAIS---AMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLE 126 (566)
T ss_dssp HHHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHH
T ss_pred HHHHHHHHhhc---C-CeEEEEeCCCCHHH---HHHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHHH
Confidence 34566766553 4 45666666777776 4455777889999999998765432 21110 000 001 12222
Q ss_pred --hcCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018037 250 --RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (362)
Q Consensus 250 --~g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (362)
+.+-.....+. +++++.+.+.+|+..+.. .||+.|++-.
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~ 168 (566)
T 2vbi_A 127 MARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIAC 168 (566)
T ss_dssp HHHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred HHhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 12333345553 455566677777776666 8999999864
No 59
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=88.20 E-value=1.7 Score=41.55 Aligned_cols=99 Identities=19% Similarity=0.124 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHhhCCCCCeEEE-EeCCcccccchHHHHHHHH-H--------hCCCCeEEEEEcCCc-ccccccccccC
Q 018037 175 QIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALNIA-A--------LWDLPAILVCENNHY-GMGTAEWRAAK 243 (362)
Q Consensus 175 ~~p~A~G~A~A~k~~~~~~vvv~-~~GDGa~~~G~~~Ealn~A-~--------~~~LPvIfVv~NN~~-gi~t~~~~~~~ 243 (362)
.+++|.|+|++ + -++++. .++|.. + ..++.+... + +.++|+++++.+ ++ |-..+++.+.
T Consensus 74 ~v~~a~G~A~~----G-~rp~~~~~f~~F~-~--~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G~tHs~~- 143 (341)
T 2ozl_B 74 FAGIAVGAAMA----G-LRPICEFMTFNFS-M--QAIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVAAQHSQC- 143 (341)
T ss_dssp HHHHHHHHHHT----T-CEEEEECSSGGGG-G--GGHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCCGGGCCC-
T ss_pred HHHHHHHHHHC----C-CEEEEEeccHHHH-H--HHHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCCcchhhH-
Confidence 35667787764 2 244554 488887 2 244445443 3 389999999885 43 3222222121
Q ss_pred CchHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEEE
Q 018037 244 SPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (362)
Q Consensus 244 ~~~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (362)
.+ ..--.+|++.| .-.|+.+.+..++.|++. ++|++|-..
T Consensus 144 -~e--a~l~~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~~~ 184 (341)
T 2ozl_B 144 -FA--AWYGHCPGLKVVSPWNSEDAKGLIKSAIRD---NNPVVVLEN 184 (341)
T ss_dssp -CH--HHHHTSTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEEEC
T ss_pred -HH--HHhccCCCCEEEEeCCHHHHHHHHHHHHhc---CCCEEEEEC
Confidence 12 11112455443 446899999999998875 899988553
No 60
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=87.78 E-value=1.1 Score=43.49 Aligned_cols=97 Identities=18% Similarity=0.043 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEE-eCCcccccchHHHHHHH-HHhC--------CCCeEEEEEcCCcccccccccccCCc
Q 018037 176 IPLGCGLAFAQKYSKDETVTFAL-YGDGAANQGQLFEALNI-AALW--------DLPAILVCENNHYGMGTAEWRAAKSP 245 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~-~GDGa~~~G~~~Ealn~-A~~~--------~LPvIfVv~NN~~gi~t~~~~~~~~~ 245 (362)
+++|.|+|++ + -++++.+ ++|... ..++.+.. ++.. ++|+++++.+.+..-..+.+.+
T Consensus 111 v~~a~G~A~~----G-~rpv~~~tf~~Fl~---~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs~---- 178 (369)
T 1ik6_A 111 LGFAMGMAMA----G-LKPVAEIQFVDFIW---LGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHSN---- 178 (369)
T ss_dssp HHHHHHHHHT----T-CEEEEECCCC-------CCHHHHHHHHHHHHC------CCCCEEEEEECC--------------
T ss_pred HHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCccccc----
Confidence 4567787764 2 2445544 999772 23333433 4444 9999999887663212222211
Q ss_pred hHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 246 ~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
.+...--.+|++.| .=.|+.+.+..++.|++. ++|++|-
T Consensus 179 ~~~a~l~~iPnl~V~~Psd~~e~~~ll~~A~~~---~~Pv~i~ 218 (369)
T 1ik6_A 179 SPEAIFVHTPGLVVVMPSTPYNAKGLLKAAIRG---DDPVVFL 218 (369)
T ss_dssp -HHHHHHTCTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEE
T ss_pred cHHHHHcCCCCcEEEecCCHHHHHHHHHHHHhC---CCCEEEE
Confidence 11121113455444 446899999999998864 8999884
No 61
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=87.53 E-value=1.1 Score=46.01 Aligned_cols=106 Identities=17% Similarity=0.116 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhhcCCcc
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGDYVP 255 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~g~gi~ 255 (362)
-+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|.-+-... ++....+......+.. .+--.
T Consensus 83 ~aA~GyAr~t---gkpgv~~~TsGpG~~N---~~~gia~A~~~~vPlv~ItG~~~~~~~g~~~~Q~~d~~~~~~-~~tk~ 155 (604)
T 2x7j_A 83 FFALGLAKAK---QRPVLLICTSGTAAAN---FYPAVVEAHYSRVPIIVLTADRPHELREVGAPQAINQHFLFG-NFVKF 155 (604)
T ss_dssp HHHHHHHHHH---TSCEEEEECSSHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGSSSCCTTCCCCTTTTG-GGSSC
T ss_pred HHHHHHHHhh---CCCEEEEECChhHHHH---HHHHHHHHhhcCCCEEEEeCCCCHHHhCCCCCCcCcHHHHhh-hheee
Confidence 3566766553 4556777778888877 3445777888999999998765432 1111001000111111 11112
Q ss_pred eEEEeCCCHHH-------HHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018037 256 GLKVDGMDALA-------VKQACKFAKEHALK--NGPMILEMDTY 291 (362)
Q Consensus 256 g~~VdG~D~~a-------v~~a~~~A~~~ar~--~gP~lIe~~ty 291 (362)
...|. ++++ +.+.+++|+..+.. .||+.|++-..
T Consensus 156 ~~~v~--~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 156 FTDSA--LPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp EEECC--CCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred eeecC--CCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 34443 2332 67777888877765 69999998753
No 62
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=87.26 E-value=0.98 Score=46.89 Aligned_cols=100 Identities=19% Similarity=0.275 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCc-ccccccccccCCchHhhhcCCc
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHY-GMGTAEWRAAKSPSYYKRGDYV 254 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~-gi~t~~~~~~~~~~~~~~g~gi 254 (362)
+++|+|+|++ .-++++.++.+.. +-.+-..++.++..++||+|++.+.+. |-..+++.. ..|..-. -.+
T Consensus 377 ~~~a~G~A~~-----G~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~~--~~d~a~~-r~i 446 (629)
T 2o1x_A 377 VTTAAGMALQ-----GMRPVVAIYSTFL--QRAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNG--VFDLSFL-RSI 446 (629)
T ss_dssp HHHHHHHHHT-----TCEEEEEEEHHHH--GGGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTCB--CSHHHHT-TTS
T ss_pred HHHHHHHHHc-----CCEEEEEecHHHH--HHHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccCc--cHHHHHH-Hcc
Confidence 4567777764 2356777777754 222333467788999999999977664 211222222 1232221 124
Q ss_pred ceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 255 PGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 255 ~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
|++.| .=.|+.+++..++.|++. ++|++|-.
T Consensus 447 P~l~v~~P~d~~e~~~~~~~a~~~---~~Pv~i~~ 478 (629)
T 2o1x_A 447 PGVRIGLPKDAAELRGMLKYAQTH---DGPFAIRY 478 (629)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHS---SSCEEEEC
T ss_pred CCcEEEecCCHHHHHHHHHHHHhC---CCCEEEEe
Confidence 55444 446899999999999876 89998854
No 63
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=86.68 E-value=3.9 Score=42.82 Aligned_cols=100 Identities=19% Similarity=0.189 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhCC-CCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCchHhhhcCC
Q 018037 177 PLGCGLAFAQKYSK-DETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSPSYYKRGDY 253 (362)
Q Consensus 177 p~A~G~A~A~k~~~-~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~~~~~~g~g 253 (362)
++|.|+|+. | .-++++.++.+.+. -.++++..++..++||+|++...+.+.+ .+++ +. ..+.... -.
T Consensus 428 ~~a~GlA~~----G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tH-q~-~edla~l-r~ 497 (675)
T 1itz_A 428 AICNGIALH----SPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTH-QP-IEHLVSF-RA 497 (675)
T ss_dssp HHHHHHHTT----CTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-CC-SSHHHHH-HS
T ss_pred HHHHHHHhc----CCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCc-Cc-HHHHHHh-cc
Confidence 466676643 3 13566666655542 3567788899999999999987776643 2333 11 2233221 13
Q ss_pred cceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 254 VPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 254 i~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
+|++.| .=.|+.++..+++.|++. .++|++|-.
T Consensus 498 iP~l~V~~Pad~~e~~~~l~~a~~~--~~~Pv~i~~ 531 (675)
T 1itz_A 498 MPNILMLRPADGNETAGAYKVAVLN--RKRPSILAL 531 (675)
T ss_dssp SSSCEEECCCSHHHHHHHHHHHHHC--TTSCEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHh--CCCcEEEEe
Confidence 566554 446889999999998862 279999843
No 64
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=86.53 E-value=1.3 Score=45.33 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhhcCCcc
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGDYVP 255 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~g~gi~ 255 (362)
-+|.|.|.+ .++-.++++..|=|++| ..-++..|...++|+|+|+-+.... ++....+......+.. .+--.
T Consensus 57 ~~A~GyAr~---tgk~~v~~~tsGpG~~N---~~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q~~d~~~~~~-~~tk~ 129 (590)
T 1v5e_A 57 MAAVMQSKF---GGNLGVTVGSGGPGASH---LINGLYDAAMDNIPVVAILGSRPQRELNMDAFQELNQNPMYD-HIAVY 129 (590)
T ss_dssp HHHHHHHHT---TCCCCEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTTCTTCCCCHHHHH-TTCSE
T ss_pred HHHHHHHHH---HCCCEEEEeCcChHHHH---HHHHHHHHHhcCCCEEEEcCCCCcccCCCCcccccCHHHHHH-hhccE
Confidence 445565543 34556777777888776 3445666888899999998776543 2211111111111111 12222
Q ss_pred eEEEeCCCHHHHHHHHHHHHHHhcc-C-CCEEEEEE
Q 018037 256 GLKVDGMDALAVKQACKFAKEHALK-N-GPMILEMD 289 (362)
Q Consensus 256 g~~VdG~D~~av~~a~~~A~~~ar~-~-gP~lIe~~ 289 (362)
...+ .+++++.+.+++|+..+.. + ||++| +-
T Consensus 130 ~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l-iP 162 (590)
T 1v5e_A 130 NRRV--AYAEQLPKLVDEAARMAIAKRGVAVLE-VP 162 (590)
T ss_dssp EEEC--CSGGGHHHHHHHHHHHHHHTTSEEEEE-EE
T ss_pred EEEe--CCHHHHHHHHHHHHHHHhcCCCceEEE-Ec
Confidence 3445 4777888889999888877 4 89999 54
No 65
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=86.01 E-value=2.2 Score=40.51 Aligned_cols=100 Identities=13% Similarity=0.036 Sum_probs=58.1
Q ss_pred chhHHHHHHHHHHhhCCCCCeEEE-EeCCcccccchHHHHHH-HHHh--------CCCCeEEEEEcCCcccccccccccC
Q 018037 174 AQIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALN-IAAL--------WDLPAILVCENNHYGMGTAEWRAAK 243 (362)
Q Consensus 174 ~~~p~A~G~A~A~k~~~~~~vvv~-~~GDGa~~~G~~~Ealn-~A~~--------~~LPvIfVv~NN~~gi~t~~~~~~~ 243 (362)
..+++|.|+|++- -++++. .++++. + ..++.+. .++. +++|+++++.+.+ +...+.+..
T Consensus 63 ~~~~~a~G~A~~G-----~rp~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~th~s-- 131 (338)
T 1qs0_B 63 GIVGTAVGMGAYG-----LRPVVEIQFADYF-Y--PASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGGQTHS-- 131 (338)
T ss_dssp HHHHHHHHHHHHT-----CEEEEECSCGGGC-G--GGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCCSSSS--
T ss_pred HHHHHHHHHHhCC-----CEEEEEeccHhHH-H--HHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCccccc--
Confidence 3456788888762 244443 488887 2 2444443 3443 3599999987654 322222211
Q ss_pred CchHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 244 SPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 244 ~~~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
..|..-.. .+|++.| .-.|+.+.+..++.|++. ++|++|-.
T Consensus 132 ~~d~~~l~-~iP~l~V~~Psd~~e~~~~l~~A~~~---~~Pv~i~~ 173 (338)
T 1qs0_B 132 QSPEAMFT-QVCGLRTVMPSNPYDAKGLLIASIEC---DDPVIFLE 173 (338)
T ss_dssp CCCHHHHT-TSTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred ccHHHHHh-cCCCCEEEeeCCHHHHHHHHHHHHhc---CCcEEEEE
Confidence 12332211 2344333 446899999999998875 89998844
No 66
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=85.94 E-value=3.1 Score=42.98 Aligned_cols=101 Identities=15% Similarity=0.204 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCc-ccccccccccCCchHhhhcCCc
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHY-GMGTAEWRAAKSPSYYKRGDYV 254 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~-gi~t~~~~~~~~~~~~~~g~gi 254 (362)
+++|+|+|++ .-++++.++++... -.+-..++.++..++|+++++.+.++ |-..+++.+ ..|+... -.+
T Consensus 374 ~~~a~G~A~~-----G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~~G~tH~~--~~d~~~~-~~i 443 (621)
T 2o1s_A 374 VTFAAGLAIG-----GYKPIVAIYSTFLQ--RAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQG--AFDLSYL-RCI 443 (621)
T ss_dssp HHHHHHHHHT-----TCEEEEEEETTGGG--GGHHHHHHTTTTTTCCCEEEEESCBCCCTTCGGGCB--CSHHHHT-TTS
T ss_pred HHHHHHHHHC-----CCEEEEEehHhHHH--HHHHHHHHHHHhcCCCEEEEEECCccCCCCCCccCc--hHHHHHH-hcC
Confidence 4567787774 24677788888752 22333467788999999999987765 212232222 1232221 124
Q ss_pred ceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 255 PGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 255 ~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
|++.| .=.|+.+++..++.|++. .++|++|-.
T Consensus 444 P~l~v~~P~d~~e~~~~l~~a~~~--~~~Pv~i~~ 476 (621)
T 2o1s_A 444 PEMVIMTPSDENECRQMLYTGYHY--NDGPSAVRY 476 (621)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHC--CSSCEEEEC
T ss_pred CCCEEEecCCHHHHHHHHHHHHHc--CCCCEEEEe
Confidence 44443 446899999999998863 278998854
No 67
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=85.82 E-value=2 Score=43.64 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccc--cccCCch-Hhh--h
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEW--RAAKSPS-YYK--R 250 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~--~~~~~~~-~~~--~ 250 (362)
-+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|+-+-... ++.... .+....+ ... +
T Consensus 73 ~~A~GyAr~t---gkp~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~ 146 (565)
T 2nxw_A 73 FAADAAARYS---STLGVAAVTYGAGAFN---MVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFK 146 (565)
T ss_dssp HHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHHT
T ss_pred HHHHHHHHHh---CCCeEEEECCCCCHHH---HHHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHH
Confidence 3466776653 4445677777888776 3455777888999999998764332 211100 0000011 211 1
Q ss_pred cCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018037 251 GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (362)
Q Consensus 251 g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (362)
.+-....++. +++++.+.+.+|+..+.. .||+.|++-.
T Consensus 147 ~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 185 (565)
T 2nxw_A 147 EITVAQARLD--DPAKAPAEIARVLGAARAQSRPVYLEIPR 185 (565)
T ss_dssp TSCSCEEECC--CTTTHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred hhheEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEECCh
Confidence 1222334553 555666677777776666 8999999973
No 68
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=85.81 E-value=4 Score=42.66 Aligned_cols=106 Identities=16% Similarity=0.202 Sum_probs=65.9
Q ss_pred ccccch-hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCch
Q 018037 170 GIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSPS 246 (362)
Q Consensus 170 g~lG~~-~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~~ 246 (362)
|+-.++ +++|.|+|+. +.-+++++.+...+. -.++++.+++..++||+|++.+.+++.+ .+++. ...+
T Consensus 408 GIaE~~~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tHq--~~ed 478 (669)
T 2r8o_A 408 GVREFGMTAIANGISLH----GGFLPYTSTFLMFVE---YARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQ--PVEQ 478 (669)
T ss_dssp CSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---TTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTC--CSSH
T ss_pred chhHHHHHHHHHHHHHc----CCCeEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCccC--CHHH
Confidence 443333 3567777764 122456666655542 2356677899999999999988887643 23331 1223
Q ss_pred HhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 247 ~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
..... .+|++.| .=.|+.++..+++.|++. .++|++|-
T Consensus 479 la~lr-~iP~l~V~~Pad~~E~~~~l~~a~~~--~~~Pv~i~ 517 (669)
T 2r8o_A 479 VASLR-VTPNMSTWRPCDQVESAVAWKYGVER--QDGPTALI 517 (669)
T ss_dssp HHHHH-TSTTCEEECCSSHHHHHHHHHHHHHC--SSSCEEEE
T ss_pred HHHhc-CCCCCEEEecCCHHHHHHHHHHHHHh--CCCcEEEE
Confidence 33211 3555544 446889999999998862 27999984
No 69
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=85.61 E-value=1.7 Score=43.66 Aligned_cols=106 Identities=18% Similarity=0.079 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhh--cC
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GD 252 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~--g~ 252 (362)
.-+|.|.|.+. ++..++++..|=|++| ..-++..|...++|+|+|+-+-... ++.. ..+. ..|.... .+
T Consensus 51 a~~A~Gyar~t---g~~~v~~~tsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~-~~q~-~~d~~~~~~~~ 122 (528)
T 1q6z_A 51 VGIADGYAQAS---RKPAFINLHSAAGTGN---AMGALSNAWNSHSPLIVTAGQQTRAMIGVE-ALLT-NVDAANLPRPL 122 (528)
T ss_dssp HHHHHHHHHHH---TSCEEEEEEHHHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHTTT-CTTC-CTTGGGSSTTS
T ss_pred HHHHHHHHHHh---CCCEEEEEcCChHHHH---HHHHHHHHhhcCCCEEEEeCCCcccccCCC-cccc-cccHHHHHHHh
Confidence 34566776653 4555677777888876 3445777889999999998765432 1111 0011 0122221 11
Q ss_pred CcceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018037 253 YVPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (362)
Q Consensus 253 gi~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~ty 291 (362)
--...++ .+++++.+.+.+|+..+.. .||+.|++-..
T Consensus 123 ~k~~~~v--~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 123 VKWSYEP--ASAAEVPHAMSRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp CSCEECC--SSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGG
T ss_pred hHhhhcC--CCHHHHHHHHHHHHHHHhcCCCCcEEEEechh
Confidence 1122334 4666778888888887766 58999998653
No 70
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=85.45 E-value=1.6 Score=44.35 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-ccc-ccccccCCchHhh--hcC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGT-AEWRAAKSPSYYK--RGD 252 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t-~~~~~~~~~~~~~--~g~ 252 (362)
-+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|.-+-... ++. ...-+ ..|... +.+
T Consensus 61 ~~A~GyAr~t---g~pgv~~~TsGpG~~N---~~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q--~~dq~~~~~~~ 132 (568)
T 2c31_A 61 YAASIAGYIE---GKPGVCLTVSAPGFLN---GVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYE--EMDQMNVARPH 132 (568)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTT--CCCHHHHSGGG
T ss_pred HHHHHHHHHh---CCCEEEEEcCCccHHH---HHHHHHHHHhcCCCEEEEccCCCccccCCCCCccc--ccCHHHHHHhh
Confidence 3466666543 4445777777777776 4566778889999999998765432 110 00001 112211 112
Q ss_pred CcceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018037 253 YVPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (362)
Q Consensus 253 gi~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (362)
--....+ .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 133 tk~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (568)
T 2c31_A 133 CKASFRI--NSIKDIPIGIARAVRTAVSGRPGGVYVDLPA 170 (568)
T ss_dssp SSEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEET
T ss_pred hheeeec--CCHHHHHHHHHHHHHHhcCCCCceEEEeCCH
Confidence 2223444 4677788888888887765 6999998853
No 71
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=85.34 E-value=1.6 Score=44.29 Aligned_cols=104 Identities=13% Similarity=0.121 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-ccc-ccccccCCchHhh--hcC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGT-AEWRAAKSPSYYK--RGD 252 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t-~~~~~~~~~~~~~--~g~ 252 (362)
-+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|+-+-... ++. ...-+ ..|... +.+
T Consensus 59 ~~A~Gyar~t---g~pgv~~~TsGpG~~N---~~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q--~~dq~~~~~~~ 130 (564)
T 2q28_A 59 YAAAASGFLT---QKPGICLTVSAPGFLN---GLTALANATVNGFPMIMISGSSDRAIVDLQQGDYE--ELDQMNAAKPY 130 (564)
T ss_dssp HHHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTT--CCCHHHHHGGG
T ss_pred HHHHHHHHHh---CCCEEEEEccCchHHH---HHHHHHHHHhcCCCEEEEeCCCCccccCCCCCccc--cccHHHHHHHh
Confidence 3466766553 3445677777777776 4556777889999999998765432 110 00001 112211 112
Q ss_pred CcceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018037 253 YVPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (362)
Q Consensus 253 gi~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (362)
-....+| .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 131 tk~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 168 (564)
T 2q28_A 131 AKAAFRV--NQPQDLGIALARAIRVSVSGRPGGVYLDLPA 168 (564)
T ss_dssp SSEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred hheeeec--CCHHHHHHHHHHHHHHHhcCCCceEEEEcCH
Confidence 2223445 4677788888888887775 6999998854
No 72
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=85.20 E-value=4.8 Score=42.05 Aligned_cols=107 Identities=18% Similarity=0.177 Sum_probs=67.6
Q ss_pred Cccccc-hhHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCc
Q 018037 169 HGIVGA-QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSP 245 (362)
Q Consensus 169 ~g~lG~-~~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~ 245 (362)
.|+-.+ .+++|.|+|+. +.-++++.++.+-.. ..++.+.+++..++||+|+....++|.+ .+++.. ..
T Consensus 408 ~GIaE~~~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq~--~e 478 (663)
T 3kom_A 408 YGVREFGMAAIMNGLSLY----GGIKPYGGTFLVFSD---YSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQP--IE 478 (663)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCC--SS
T ss_pred cCccHHHHHHHHHHHHHc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCCcCC--HH
Confidence 455544 34667888874 123566666666542 2456778889999999999887776543 333321 22
Q ss_pred hHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 246 ~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
+.+-. -.+|++.| -=.|+.++..+++.|++. .++|++|-
T Consensus 479 d~a~l-r~iPnl~V~~Pad~~e~~~~l~~A~~~--~~~Pv~ir 518 (663)
T 3kom_A 479 HVPSL-RLIPNLSVWRPADTIETMIAWKEAVKS--KDTPSVMV 518 (663)
T ss_dssp HHHHH-HTSTTCEEECCCSHHHHHHHHHHHHHC--SSCCEEEE
T ss_pred HHHHH-hcCCCcEEEeeCCHHHHHHHHHHHHHh--CCCCEEEE
Confidence 33221 13565554 335888999999998861 28999883
No 73
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=85.12 E-value=2.5 Score=43.46 Aligned_cols=105 Identities=14% Similarity=0.079 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccccccccccCCchHhhh--cCCc
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYV 254 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~t~~~~~~~~~~~~~~--g~gi 254 (362)
-+|.|.|.+. .++-.++++..|=|++|- .-++..|..-+.|+|+|+-+-.........-+ ..|.... .+--
T Consensus 79 ~~A~GyAr~t--gg~~~v~~~TsGpG~~N~---~~~l~~A~~~~vPlvvItg~~p~~~~~~~~~Q--~~d~~~~~~~~tk 151 (616)
T 2pan_A 79 HMAEGYTRAT--AGNIGVCLGTSGPAGTDM---ITALYSASADSIPILCITGQAPRARLHKEDFQ--AVDIEAIAKPVSK 151 (616)
T ss_dssp HHHHHHHHHS--TTCCEEEEECSTHHHHTS---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCTT--CCCHHHHHGGGSS
T ss_pred HHHHHHHHhc--CCCceEEEeCCCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCccccc--ccCHHHHHHHHHH
Confidence 3466666542 133345666778887763 44577788889999998876543221111111 1222221 1222
Q ss_pred ceEEEeCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018037 255 PGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (362)
Q Consensus 255 ~g~~VdG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (362)
....+ .++.++...+++|+..+.. .||+.|++-.
T Consensus 152 ~~~~v--~~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 152 MAVTV--REAALVPRVLQQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred hhccc--CCHHHHHHHHHHHHHHHhcCCCceEEEEcch
Confidence 23444 4677888889999888776 5999999864
No 74
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=85.01 E-value=4.2 Score=42.89 Aligned_cols=106 Identities=21% Similarity=0.236 Sum_probs=66.1
Q ss_pred Cccccch-hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCc
Q 018037 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSP 245 (362)
Q Consensus 169 ~g~lG~~-~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~ 245 (362)
.|+-.++ +++|.|+|+.. .-++++.++.+ |.+ ..+..+.+++..++||+|+....+++.+ .+++.. ..
T Consensus 453 ~GIaE~~mv~~AaGlA~~~----G~~Pv~~~f~~--F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~THq~--~e 523 (711)
T 3uk1_A 453 YGVREFGMSAAINGLVLHG----GYKPFGGTFLT--FSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTHQS--VE 523 (711)
T ss_dssp CCSCHHHHHHHHHHHHHHS----SCEEEEEEEGG--GHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCC--SS
T ss_pred eCccHHHHHHHHHHHHHcC----CCEEEEEEhHH--HHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCccCC--hh
Confidence 4555544 46778888631 23455565543 332 2456677888999999999987776543 333321 22
Q ss_pred hHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 246 ~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
+.+-. -.+|++.| .=.|+.++..+++.|++. ++|++|-
T Consensus 524 d~a~l-r~iPnl~V~~Pad~~E~~~~l~~Ai~~---~~Pv~ir 562 (711)
T 3uk1_A 524 HVASL-RLIPNLDVWRPADTVETAVAWTYAVAH---QHPSCLI 562 (711)
T ss_dssp HHHHH-HTSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEE
T ss_pred HHHHH-hcCCCCEEEecCCHHHHHHHHHHHHhc---CCCEEEE
Confidence 33221 13666554 346888999999998874 8999883
No 75
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=84.86 E-value=3.5 Score=42.02 Aligned_cols=106 Identities=24% Similarity=0.233 Sum_probs=59.1
Q ss_pred HHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhhcCCcce
Q 018037 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGDYVPG 256 (362)
Q Consensus 178 ~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~g~gi~g 256 (362)
+|.|.|.+. ++-.++++..|=|++| ..-++..|..-++|+|+|.-+-... +++...+......+.. .+--..
T Consensus 64 aAdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~p~~~~g~~~~Qe~d~~~~~~-~~tk~~ 136 (578)
T 3lq1_A 64 FALGLAKAS---KRPVVLLCTSGTAAAN---YFPAVAEANLSQIPLIVLTADRPHELRNVGAPQAMDQLHLYG-SHVKDF 136 (578)
T ss_dssp HHHHHHHHH---CCCEEEEECSSHHHHT---THHHHHHHHHTTCCEEEEEEECCGGGTTSSCTTCCCCTTTTG-GGSSEE
T ss_pred HHHHHHHhh---CCCEEEEECCchhhhh---hhHHHHHHHhcCCCeEEEeCCCCHHhhcCCCCCCcCHhhHHh-hheeeE
Confidence 566776654 4556777888888887 3455778889999999888654321 1111000000111111 011112
Q ss_pred EEEe-CCCHHH----HHHHHHHHHHHhcc--CCCEEEEEEE
Q 018037 257 LKVD-GMDALA----VKQACKFAKEHALK--NGPMILEMDT 290 (362)
Q Consensus 257 ~~Vd-G~D~~a----v~~a~~~A~~~ar~--~gP~lIe~~t 290 (362)
..|. ..+..+ +..++++|+..+.. .||++|++-.
T Consensus 137 ~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 137 TDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp EECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred eecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 3342 334322 34567777777766 6999999864
No 76
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=83.41 E-value=5.8 Score=37.34 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEE-eCCcccccchHHHHHHH-HHh--------CCCCeEEEEEcCCcc-cccccccccCC
Q 018037 176 IPLGCGLAFAQKYSKDETVTFAL-YGDGAANQGQLFEALNI-AAL--------WDLPAILVCENNHYG-MGTAEWRAAKS 244 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~-~GDGa~~~G~~~Ealn~-A~~--------~~LPvIfVv~NN~~g-i~t~~~~~~~~ 244 (362)
+++|.|+|++- -++++.+ +++.. + ..++.+.. ++. .++|+|+++. .+++ -+.+.+.+
T Consensus 64 v~~a~G~A~~G-----~~p~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~~hs~--- 131 (324)
T 1umd_B 64 VGAALGMAAHG-----LRPVAEIQFADYI-F--PGFDQLVSQVAKLRYRSGGQFTAPLVVRMP-SGGGVRGGHHHSQ--- 131 (324)
T ss_dssp HHHHHHHHHHT-----CEEEEECSSGGGC-G--GGHHHHHHTTTTHHHHTTTSSCCCCEEEEE-ECSSSSCGGGSSC---
T ss_pred HHHHHHHHHCC-----CEEEEEeccHhHH-H--HHHHHHHHHHHHHHhhcCCCCcCCEEEEEc-CCCCCCCCCccch---
Confidence 56788888762 2445543 88886 2 24454532 443 7999998887 3442 22222111
Q ss_pred chHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 245 PSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 245 ~~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
.+..- --.+|++.| .-.|+.+.+..++.|+++ ++|++|-
T Consensus 132 ~~~a~-~~~iP~~~V~~P~d~~e~~~~l~~a~~~---~~Pv~i~ 171 (324)
T 1umd_B 132 SPEAH-FVHTAGLKVVAVSTPYDAKGLLKAAIRD---EDPVVFL 171 (324)
T ss_dssp CCHHH-HHTSTTCEEEECCSHHHHHHHHHHHHHC---SSCEEEE
T ss_pred hHHHH-HhcCCCCEEEEeCCHHHHHHHHHHHHhc---CCCEEEE
Confidence 12211 112444333 456899999999999864 8999884
No 77
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=83.38 E-value=5.7 Score=37.41 Aligned_cols=97 Identities=18% Similarity=0.086 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHHhhCCCCCeEEEE-eCCcccccchHHHHHH-HHHh--------CCCCeEEEEEcCCcc-cccccccccC
Q 018037 175 QIPLGCGLAFAQKYSKDETVTFAL-YGDGAANQGQLFEALN-IAAL--------WDLPAILVCENNHYG-MGTAEWRAAK 243 (362)
Q Consensus 175 ~~p~A~G~A~A~k~~~~~~vvv~~-~GDGa~~~G~~~Ealn-~A~~--------~~LPvIfVv~NN~~g-i~t~~~~~~~ 243 (362)
.+.+|+|+|++ | -++++++ ++++. + ..++.+. -++. .++|+|+++. .+++ -+.+.+.+
T Consensus 62 ~v~~a~G~A~~----G-~rp~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~~hs~-- 130 (324)
T 1w85_B 62 IGGLAIGLALQ----G-FRPVPEIQFFGFV-Y--EVMDSICGQMARIRYRTGGRYHMPITIRSP-FGGGVHTPELHSD-- 130 (324)
T ss_dssp HHHHHHHHHHT----T-CEEEEBCSSGGGG-G--GTHHHHHTTGGGHHHHTTTSSCCCCEEEEE-ECSSSCCCTTSSC--
T ss_pred HHHHHHHHHhC----C-CEEEEEecchhHH-H--HHHHHHHHHHHHHhhhccCCCcCCEEEEEe-ccCCCCCCCcccc--
Confidence 45677787764 2 2344433 88887 2 2444453 2444 7999998876 3432 22222211
Q ss_pred CchHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 244 SPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 244 ~~~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
.+. ..--.+|++.| .-.|+.+.+..++.|+++ ++|++|-
T Consensus 131 -~~~-a~~~~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~ 170 (324)
T 1w85_B 131 -SLE-GLVAQQPGLKVVIPSTPYDAKGLLISAIRD---NDPVIFL 170 (324)
T ss_dssp -CCH-HHHTTSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEE
T ss_pred -cHH-HHHccCCCCEEEeeCCHHHHHHHHHHHHHc---CCCEEEE
Confidence 122 21123555443 456899999999998864 8999884
No 78
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=82.73 E-value=5.5 Score=41.46 Aligned_cols=101 Identities=20% Similarity=0.184 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCchHhhhcCC
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSPSYYKRGDY 253 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~~~~~~g~g 253 (362)
+++|.|+|+. |.-++++..+.=.+. -.++++.+++..++||+|++.+.+++.+ .+++ + ...|+.... .
T Consensus 410 ~~~a~GlA~~----Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH-q-~~edla~lr-~ 479 (651)
T 2e6k_A 410 GAILNGLNLH----GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTH-Q-PVEHLMSLR-A 479 (651)
T ss_dssp HHHHHHHHHH----SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSSHHHHHH-T
T ss_pred HHHHHHHHHc----CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCcc-c-cHHHHHHhc-C
Confidence 3577787765 223556665533331 2456688899999999999988887653 2333 2 122333211 2
Q ss_pred cceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 254 VPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 254 i~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
+|++.| .=.|+.+++.+++.|++. .++|++|-.
T Consensus 480 iP~l~V~~Pad~~E~~~~l~~A~~~--~~~Pv~i~~ 513 (651)
T 2e6k_A 480 MPNLFVIRPADAYETFYAWLVALRR--KEGPTALVL 513 (651)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHC--CSSCEEEEC
T ss_pred CCCcEEEecCCHHHHHHHHHHHHHc--CCCCEEEEE
Confidence 555544 446889999999998873 268998854
No 79
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=81.81 E-value=5.9 Score=41.17 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=67.5
Q ss_pred Cccccch-hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCc
Q 018037 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSP 245 (362)
Q Consensus 169 ~g~lG~~-~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~ 245 (362)
.|+-.++ +++|.|+|+. +.-++++.++.+-+ + ..++.+.+++..++||+|+....++|.+ .+++.. ..
T Consensus 387 ~GIaE~~~v~~a~GlA~~----gG~~P~~~~f~~F~--~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~THq~--~e 457 (632)
T 3l84_A 387 FGIREHAMAAINNAFARY----GIFLPFSATFFIFS--E-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQP--IE 457 (632)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGH--H-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGSC--SS
T ss_pred eCccHHHHHHHHHHHHHc----CCCEEEEEecHHHH--H-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCCCC--Hh
Confidence 4555443 3677888875 12356666665543 2 3556777889999999999988777543 333322 22
Q ss_pred hHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 246 ~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
+++-. -.+|++.| -=.|+.++..+++.|++. ++|++|-.
T Consensus 458 d~a~l-r~iP~l~V~~P~d~~e~~~~l~~A~~~---~~Pv~ir~ 497 (632)
T 3l84_A 458 QLSTF-RAMPNFLTFRPADGVENVKAWQIALNA---DIPSAFVL 497 (632)
T ss_dssp HHHHH-HHSSSCEEECCSSHHHHHHHHHHHHHC---SSCEEEEC
T ss_pred HHHHH-hcCCCCEEEecCCHHHHHHHHHHHHhC---CCCEEEEE
Confidence 33221 13555544 335888999999999874 89998843
No 80
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=81.60 E-value=5.6 Score=41.63 Aligned_cols=107 Identities=20% Similarity=0.205 Sum_probs=65.8
Q ss_pred Cccccchh-HHHHHHHHHHhhCCCCC-eEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCC
Q 018037 169 HGIVGAQI-PLGCGLAFAQKYSKDET-VTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKS 244 (362)
Q Consensus 169 ~g~lG~~~-p~A~G~A~A~k~~~~~~-vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~ 244 (362)
.|+-.+++ ++|.|+|+. |.-+ +++..+.+-+. -.++++.+++..++||+|++...+++.+ .+++ +. .
T Consensus 414 ~gIaE~~~vg~a~GlA~~----Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tH-q~-~ 484 (680)
T 1gpu_A 414 YGIREHAMGAIMNGISAF----GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTH-QP-I 484 (680)
T ss_dssp CCSCHHHHHHHHHHHHHH----CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-CC-S
T ss_pred CCccHHHHHHHHHHHHhc----CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCcc-CC-H
Confidence 34444433 567787764 2124 56666644432 2456678899999999999987777643 3333 21 2
Q ss_pred chHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 245 PSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 245 ~~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
.+.+.. -.+|++.| -=.|+.++..+++.|++. .++|++|-
T Consensus 485 edla~l-r~iP~l~V~~Pad~~e~~~~l~~A~~~--~~~Pv~i~ 525 (680)
T 1gpu_A 485 ETLAHF-RSLPNIQVWRPADGNEVSAAYKNSLES--KHTPSIIA 525 (680)
T ss_dssp SHHHHH-HTSSSCEEECCCSHHHHHHHHHHHHHC--SSCCEEEE
T ss_pred HHHHHh-cCCCCCEEEecCCHHHHHHHHHHHHHh--CCCcEEEE
Confidence 233221 13566554 346889999999998862 27999984
No 81
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=79.97 E-value=7.4 Score=43.64 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc---cccccccccCCchHhhhcC
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG---MGTAEWRAAKSPSYYKRGD 252 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g---i~t~~~~~~~~~~~~~~g~ 252 (362)
+.+++|++++ +.++++.+--.+++ ...|.|..++-..+|+|+++.+.... ++...+.. ..++.+..
T Consensus 67 ~~aaiGAa~a------GaR~~t~Ts~~Gl~--lm~e~l~~~ag~~~P~Vi~va~R~g~~~glsi~~~hs---d~~~ar~~ 135 (1231)
T 2c42_A 67 AGAVHGALAA------GALTTTFTASQGLL--LMIPNMYKISGELLPGVFHVTARAIAAHALSIFGDHQ---DIYAARQT 135 (1231)
T ss_dssp HHHHHHHHHT------TCCEEEEECHHHHH--HHHHHHHHHHHTTCCCEEEEEECCCCSSSBCCSCCSH---HHHTTTTS
T ss_pred HHHHHHHHHc------CChHhhhccHHHHH--HHHHHHHHHhCCCCCEEEEECCCCccCCCCcCCCchh---hHHHHhcC
Confidence 4667787775 34455554322333 35677765555689988887776542 22211111 11233445
Q ss_pred CcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCC
Q 018037 253 YVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHS 297 (362)
Q Consensus 253 gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~tyR~~GHs 297 (362)
|++ .+.-.++.+++.-+..|...+.+ .-|+++-...+|+ +|.
T Consensus 136 G~~--vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 136 GFA--MLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp SCE--EEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred CcE--EEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 653 34556899999988888887777 9999998888775 554
No 82
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=79.78 E-value=7.4 Score=40.67 Aligned_cols=99 Identities=17% Similarity=0.121 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCchHhhhcCCc
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSPSYYKRGDYV 254 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~~~~~~g~gi 254 (362)
++|.|+|+. |.-++++.++..-+. -.++++.+++..++|++|++...+++.+ .+++ +. ..+..... .+
T Consensus 416 ~~a~GlA~~----GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tH-q~-~edla~lr-~i 485 (673)
T 1r9j_A 416 AILNGLDAH----DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTH-QP-VELVAALR-AM 485 (673)
T ss_dssp HHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-CC-SSHHHHHH-HS
T ss_pred HHHHHHHhc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCccc-CC-HHHHHHHc-CC
Confidence 467777764 222556666644442 2455677889999999999887776543 2333 11 22222211 25
Q ss_pred ceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 255 PGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 255 ~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
|++.| .=.|+.++..+++.|++. .++|++|-
T Consensus 486 P~l~V~~Pad~~e~~~~l~~a~~~--~~~Pv~i~ 517 (673)
T 1r9j_A 486 PNLQVIRPSDQTETSGAWAVALSS--IHTPTVLC 517 (673)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHC--TTCCEEEE
T ss_pred CCCEEEeCCCHHHHHHHHHHHHHh--CCCeEEEE
Confidence 55544 446888999999998862 27899984
No 83
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=79.25 E-value=5.5 Score=37.96 Aligned_cols=99 Identities=18% Similarity=0.159 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHhhCCCCCeEEE-EeCCcccccchHHHHHH-HHHhCCC---------CeEEEEEcCCcccccccccccC
Q 018037 175 QIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALN-IAALWDL---------PAILVCENNHYGMGTAEWRAAK 243 (362)
Q Consensus 175 ~~p~A~G~A~A~k~~~~~~vvv~-~~GDGa~~~G~~~Ealn-~A~~~~L---------PvIfVv~NN~~gi~t~~~~~~~ 243 (362)
.+++|.|+|++ | -++++. .++++.. ..++.+. .++.+++ |+++++...+.+ ..+.+..
T Consensus 79 ~v~~a~G~A~~----G-~rp~~~~tf~~F~~---~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~~-~G~th~~-- 147 (342)
T 2bfd_B 79 IVGFGIGIAVT----G-ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVG-HGALYHS-- 147 (342)
T ss_dssp HHHHHHHHHHT----T-CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCCS-SCGGGSS--
T ss_pred HHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCCC-CCcchhh--
Confidence 35667887775 2 244554 4888863 2444443 4554444 999987754332 2222221
Q ss_pred CchHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018037 244 SPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (362)
Q Consensus 244 ~~~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (362)
..|..-. -.+|++.| .-.|+.+.+..++.|+++ ++|++|-.
T Consensus 148 ~~d~~~l-~~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~~ 189 (342)
T 2bfd_B 148 QSPEAFF-AHCPGIKVVIPRSPFQAKGLLLSCIED---KNPCIFFE 189 (342)
T ss_dssp CCCHHHH-HTSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred HhHHHHH-hcCCCcEEEeeCCHHHHHHHHHHHHhc---CCcEEEEe
Confidence 1233221 12555433 456899999999999875 89998843
No 84
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=77.90 E-value=11 Score=39.66 Aligned_cols=107 Identities=20% Similarity=0.214 Sum_probs=62.5
Q ss_pred Cccccch-hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCCc
Q 018037 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSP 245 (362)
Q Consensus 169 ~g~lG~~-~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~~ 245 (362)
.|+-.++ +++|.|+|+. +.-++++..+..=+. ...-++.++++.++||+|+....++|.+ .++++. ..
T Consensus 437 ~GIaE~~mv~~A~GlA~~----gG~~Pv~~tF~~F~d---~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~THq~--ie 507 (700)
T 3rim_A 437 FGVREHAMGAILSGIVLH----GPTRAYGGTFLQFSD---YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTHQP--IE 507 (700)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTSC--SS
T ss_pred cCccHHHHHHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCccCC--hh
Confidence 3444443 3667788875 122344443322221 1233477889999999999987777543 333321 22
Q ss_pred hHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccC--CCEEEE
Q 018037 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKN--GPMILE 287 (362)
Q Consensus 246 ~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~--gP~lIe 287 (362)
+.+... .+|++.| -=.|+.++..+++.|++. .+ +|++|-
T Consensus 508 d~a~lr-~iPnl~V~~Pad~~e~~~~l~~Ai~~--~~~~~Pv~ir 549 (700)
T 3rim_A 508 HLSALR-AIPRLSVVRPADANETAYAWRTILAR--RNGSGPVGLI 549 (700)
T ss_dssp HHHHHH-TSTTCEEECCSSHHHHHHHHHHHHTT--TTCSSCEEEE
T ss_pred HHHHHh-cCCCCEEEeCCCHHHHHHHHHHHHHc--cCCCCCEEEE
Confidence 333211 3566554 335888999999888864 24 799984
No 85
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=76.62 E-value=12 Score=39.14 Aligned_cols=108 Identities=19% Similarity=0.138 Sum_probs=63.8
Q ss_pred CCccccch-hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc--cccccccCC
Q 018037 168 GHGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKS 244 (362)
Q Consensus 168 ~~g~lG~~-~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~--t~~~~~~~~ 244 (362)
..|+-.++ +++|.|+|+. +.-++++..+.--+. -...++.++++.++||+|++...+++.+ .+++.. .
T Consensus 431 d~GIaE~~mv~~A~GlA~~----gG~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq~--i 501 (690)
T 3m49_A 431 WYGVREFAMGAAMNGIALH----GGLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHEP--I 501 (690)
T ss_dssp ECCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGCC--S
T ss_pred EcCchHHHHHHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCccCC--H
Confidence 34555443 3677888875 122445544433221 1223467789999999999998876543 333322 2
Q ss_pred chHhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018037 245 PSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (362)
Q Consensus 245 ~~~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (362)
.+.+.. -.+|++.| -=.|+.++..+++.|++. .++|++|-
T Consensus 502 ed~a~l-r~iPnl~V~~Pad~~E~~~~l~~Ai~~--~~~Pv~ir 542 (690)
T 3m49_A 502 EQLAAL-RAMPNVSVIRPADGNESVAAWRLALES--TNKPTALV 542 (690)
T ss_dssp SHHHHH-HTSTTCEEECCSSHHHHHHHHHHHHHC--SSSCEEEE
T ss_pred HHHHHH-hcCCCCEEEeeCCHHHHHHHHHHHHHc--CCCCEEEE
Confidence 233221 13565544 335888999999998863 26899884
No 86
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=76.42 E-value=6.3 Score=39.83 Aligned_cols=105 Identities=8% Similarity=0.014 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc---ccccc--cc-CCchHhh-
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG---TAEWR--AA-KSPSYYK- 249 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~---t~~~~--~~-~~~~~~~- 249 (362)
-+|.|.|.+. + -.++++..|=|++| ..-++..|...++|+|+|+-+-..... ..... .. ...++..
T Consensus 56 ~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~ 128 (563)
T 2vk8_A 56 YAADGYARIK---G-MSCIITTFGVGELS---ALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRM 128 (563)
T ss_dssp HHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHH
T ss_pred HHHHHHHHhh---C-CcEEEEcCCCcHHH---HHHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHHH
Confidence 4566777654 3 34777777888876 445677788899999999876443210 00000 00 0002221
Q ss_pred -hcCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018037 250 -RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (362)
Q Consensus 250 -~g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (362)
+.+--....+ .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 129 ~~~~~k~~~~v--~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 169 (563)
T 2vk8_A 129 SANISETTAMI--TDIATAPAEIDRCIRTTYVTQRPVYLGLPA 169 (563)
T ss_dssp HHTTCSEEEEC--CCTTTHHHHHHHHHHHHHHHTSCEEEEEET
T ss_pred hhhhEEEEEEe--CCHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 1122333455 3555566666666666655 7999999864
No 87
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=73.65 E-value=15 Score=36.98 Aligned_cols=104 Identities=18% Similarity=0.098 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcc-cccccccccCCchHhhh--cCC
Q 018037 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (362)
Q Consensus 177 p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~g-i~t~~~~~~~~~~~~~~--g~g 253 (362)
-+|.|.|.+. ++-.++++..|=|++|- .-++..|..-+.|+|+|.-+-... +++... +. .|.... .+-
T Consensus 60 ~~AdGyAr~t---G~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~~~~~~g~~~~-Q~--~d~~~~~~~~t 130 (556)
T 3hww_A 60 HLALGLAKVS---KQPVAVIVTSGTAVANL---YPALIEAGLTGEKLILLTADRPPELIDCGAN-QA--IRQPGMFASHP 130 (556)
T ss_dssp HHHHHHHHHH---CSCEEEEECSSHHHHTT---HHHHHHHHHHCCCEEEEEEECCGGGSSSSCT-TC--CCCTTTTTTCS
T ss_pred HHHHHHHHhh---CCCEEEEECCCcHHHhh---hHHHHHHHHhCCCeEEEeCCCCHHHhccCCC-cc--ccHHHHHhhhe
Confidence 3466666553 45567788888888873 455777889999999988655432 211110 10 111110 011
Q ss_pred cceEEEe-CC---CHHHHHHHHHHHHHHhccCCCEEEEEEE
Q 018037 254 VPGLKVD-GM---DALAVKQACKFAKEHALKNGPMILEMDT 290 (362)
Q Consensus 254 i~g~~Vd-G~---D~~av~~a~~~A~~~ar~~gP~lIe~~t 290 (362)
-....|. .. .+..+.+++++|+.. ...||+.|++-.
T Consensus 131 k~~~~v~~~~~~~~~~~i~~~i~~A~~~-~r~GPV~i~iP~ 170 (556)
T 3hww_A 131 THSISLPRPTQDIPARWLVSTIDHALGT-LHAGGVHINCPF 170 (556)
T ss_dssp SEEEECCCCCTTSCHHHHHHHHHHHHHS-CCSSCEEEEEEC
T ss_pred eEEEecCCCcccccHHHHHHHHHHHHhc-CCCCCEEEeCCc
Confidence 1123332 11 245577888888832 127999999864
No 88
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=72.85 E-value=11 Score=38.05 Aligned_cols=105 Identities=12% Similarity=0.127 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCccc-ccc--ccc--ccCC-chHhh
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGM-GTA--EWR--AAKS-PSYYK 249 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi-~t~--~~~--~~~~-~~~~~ 249 (362)
.-+|.|.|.+. + -.++++..|=|++| ..-++..|...++|+|+|+-+..... +.. ... .... .+...
T Consensus 76 ~~~A~GyAr~t---G-~~v~~~tsGpG~~N---~~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (570)
T 2vbf_A 76 SYMADGYARTK---K-AAAFLTTFGVGELS---AINGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMK 148 (570)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHH
T ss_pred HHHHHHHHHHh---C-CeEEEEcCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHHHH
Confidence 34566776553 4 45677777877766 45567788899999999987655421 110 000 0000 01111
Q ss_pred --hcCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018037 250 --RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (362)
Q Consensus 250 --~g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (362)
+.+-....++. + +++...+.+|+..+.. .||+.|++-.
T Consensus 149 ~~~~~tk~~~~v~--~-~~~~~~l~~A~~~A~~~~GPV~l~iP~ 189 (570)
T 2vbf_A 149 MHEPVTAARTLLT--A-ENATYEIDRVLSQLLKERKPVYINLPV 189 (570)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHCCCEEEEEEH
T ss_pred HhhhhEEEEEEEC--c-ccHHHHHHHHHHHHhhCCCCEEEEcch
Confidence 11223334553 3 4555666666666655 7999999864
No 89
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=70.29 E-value=4.8 Score=40.55 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHhhCCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCCcccc-c--cccccc---CCchHhh
Q 018037 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG-T--AEWRAA---KSPSYYK 249 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~~gi~-t--~~~~~~---~~~~~~~ 249 (362)
.-+|.|.|.+. + -.++++..|=|++| ..-++..|...++|+|+|+-+...... . ...... ...++..
T Consensus 56 ~~~A~Gyar~t---g-~~v~~~tsGpG~~N---~~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~~q~~~~ 128 (552)
T 1ovm_A 56 SYAADGYARCK---G-FAALLTTFGVGELS---AMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFYH 128 (552)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCSHHHH
T ss_pred HHHHHHHHHhh---C-CcEEEEccCCcHHH---HHHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCCcHHHHHH
Confidence 34577777764 3 34777778888766 344577888999999999876443211 0 000000 0001211
Q ss_pred --hcCCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018037 250 --RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (362)
Q Consensus 250 --~g~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (362)
+.+-....++. + +.+.+.+.+|+..+.. .||+.|++-.
T Consensus 129 ~~~~~tk~~~~v~--~-~~~~~~i~~A~~~a~~~~GPV~l~iP~ 169 (552)
T 1ovm_A 129 MSEPITVAQAVLT--E-QNACYEIDRVLTTMLRERRPGYLMLPA 169 (552)
T ss_dssp HTGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHTCCEEEEEEH
T ss_pred HHHhheeEEEEEc--c-ccHHHHHHHHHHHHHhCCCCEEEEeeh
Confidence 11223334554 3 3455555666655555 7999999864
No 90
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=58.33 E-value=14 Score=31.50 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 018037 321 IERIRKLILAHDLATEKELKDIEKEVRKEVDD 352 (362)
Q Consensus 321 i~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~ 352 (362)
+.-+.+.|+++|++|++||++-.+++++....
T Consensus 113 L~ALe~lLvekGvit~~EL~ar~aEv~ar~~~ 144 (157)
T 2zzd_B 113 LLTAARILVDKQFVTLTELHNKIVEMRERVAS 144 (157)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhhhc
Confidence 36689999999999999999999999887653
No 91
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=47.28 E-value=26 Score=23.49 Aligned_cols=17 Identities=18% Similarity=0.515 Sum_probs=6.9
Q ss_pred hhHHhHhhcCCHHHHHHHH
Q 018037 309 DEISGVRQERDPIERIRKL 327 (362)
Q Consensus 309 ~e~~~~~~~~DPi~~~~~~ 327 (362)
.+++.|+ .+-+.-+|+.
T Consensus 7 ~dle~~K--qEIL~E~RkE 23 (45)
T 1use_A 7 SDLQRVK--QELLEEVKKE 23 (45)
T ss_dssp HHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHH
Confidence 3444443 2444444433
No 92
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=43.35 E-value=1.1e+02 Score=24.80 Aligned_cols=33 Identities=27% Similarity=0.201 Sum_probs=27.9
Q ss_pred CCcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCE
Q 018037 252 DYVPGLKVDGMDALAVKQACKFAKEHALK-NGPM 284 (362)
Q Consensus 252 ~gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~ 284 (362)
-|+-.++..|.|.+++..|+++.+..+|+ -|.+
T Consensus 82 sgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 82 SGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 45666788999999999999999999998 7643
No 93
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=43.27 E-value=54 Score=30.11 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=28.9
Q ss_pred EEEeCCcc--cccchHHHHHHHHHhCCCCeEEEEEcC
Q 018037 196 FALYGDGA--ANQGQLFEALNIAALWDLPAILVCENN 230 (362)
Q Consensus 196 v~~~GDGa--~~~G~~~Ealn~A~~~~LPvIfVv~NN 230 (362)
|+|--||+ .+.|.+.-+|.+|..++ .|.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 56777888 67889999999999999 899998653
No 94
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=41.62 E-value=43 Score=29.18 Aligned_cols=40 Identities=25% Similarity=0.378 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++ +...|-+++|+.+..++++++..++-++...
T Consensus 133 rda~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id 172 (185)
T 1is1_A 133 RDANNDLKA-LLKDKEISEDEDRKAQEEIQKLTDVAVKKID 172 (185)
T ss_dssp HHHHHHHHH-HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 577777777 4667789999999999999988777666543
No 95
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=41.59 E-value=43 Score=29.18 Aligned_cols=40 Identities=23% Similarity=0.367 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++ +...|-+++|+.+..++++++..++-++..+
T Consensus 133 rda~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id 172 (185)
T 1wqg_A 133 RKAMEELHR-IRKEGEAGEDEVGRAEKDLDKTTHQYVTQID 172 (185)
T ss_dssp HHHHHHHHH-HHHTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 577777777 4667789999999999999988777666543
No 96
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=40.75 E-value=41 Score=29.32 Aligned_cols=40 Identities=28% Similarity=0.445 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++ +...|-+++|+.+..++++++..++-++...
T Consensus 133 rda~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id 172 (185)
T 1dd5_A 133 REILKKIKE-DQKEGLIPEDDAKRLENEIQKLTDEFIEKLD 172 (185)
T ss_dssp HHHHHHHHH-HHHHTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 577777777 4566779999999999999988777666543
No 97
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=40.43 E-value=41 Score=29.30 Aligned_cols=40 Identities=25% Similarity=0.422 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++ +...|-+++|+.+..++++++..++-++...
T Consensus 133 rda~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id 172 (185)
T 1ise_A 133 RDANDKVKA-LLKDKEISEDDDRRSQDDVQKLTDAAIKKIE 172 (185)
T ss_dssp HHHHHHHHH-HHHHSSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 577777777 4556779999999999999988777666543
No 98
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=36.92 E-value=1.3e+02 Score=32.53 Aligned_cols=102 Identities=18% Similarity=0.220 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHhhCCCCCeEE--EEeCCcccc-cchHHHHHH-HH-HhC--CCCeEEEEEcCCcccccccccccCCchHh
Q 018037 176 IPLGCGLAFAQKYSKDETVTF--ALYGDGAAN-QGQLFEALN-IA-ALW--DLPAILVCENNHYGMGTAEWRAAKSPSYY 248 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv--~~~GDGa~~-~G~~~Ealn-~A-~~~--~LPvIfVv~NN~~gi~t~~~~~~~~~~~~ 248 (362)
++.|.|+|++ +...++| +.+||=... | ..++-+. -+ +.| ++|+++++.. +|.-..+...+....+|.
T Consensus 665 vg~a~G~A~~----G~~~lpv~e~qf~dF~~~AQ-ra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~Hss~~~E~~l 738 (933)
T 2jgd_A 665 LAFEYGYATA----EPRTLTIWEAQFGDFANGAQ-VVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEHSSARLERYL 738 (933)
T ss_dssp HHHHHHHHHH----CTTSEEEEEC-CGGGGGGGH-HHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTSSCCCHHHHH
T ss_pred HHHHHHHHhc----CCCCCCEEEEEEhhhhcccH-HHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCcccccchHHHHH
Confidence 4567777765 3443343 367774421 1 2333232 33 344 8999998886 442223322221122443
Q ss_pred hhcCCcceEEE-eCCCHHHHHHHHHHHHHHhcc-CCCEEE
Q 018037 249 KRGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMIL 286 (362)
Q Consensus 249 ~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~-~gP~lI 286 (362)
.. ..+|++.| .=.|+.+.+..++.++. +. ++|++|
T Consensus 739 ~~-~~~pnm~V~~Pst~~e~~~lLr~a~~--~~~~~Pvii 775 (933)
T 2jgd_A 739 QL-CAEQNMQVCVPSTPAQVYHMLRRQAL--RGMRRPLVV 775 (933)
T ss_dssp HT-CCTTCCEEECCCSHHHHHHHHHHHHH--SSCCCCEEE
T ss_pred HH-hCCCCeEEEecCCHHHHHHHHHHHHH--hcCCCcEEE
Confidence 32 23355544 44689999998888752 34 799988
No 99
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=36.53 E-value=42 Score=29.26 Aligned_cols=40 Identities=33% Similarity=0.489 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++ +...|-+++|+.+..++++++..++-++...
T Consensus 134 rda~~~lKk-~~K~~~iseD~~k~~e~~iQkltd~~i~~id 173 (185)
T 1eh1_A 134 REALDKLKK-LAKELHLSEDETKRAEAEIQKITDEFIAKAD 173 (185)
T ss_dssp HHHHHHHHH-HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 577777777 4555678999999999999988777666543
No 100
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=35.32 E-value=52 Score=26.68 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++ |...|-+|+++.+..++++++..+.-++...
T Consensus 61 RDAnd~lKK-l~KdkeISEDe~kr~e~eIQKLTDkyIkkID 100 (121)
T 3lf9_A 61 RDAANDLAA-LGKDKEVNWFDISQALWEIQKLTDVAVKKID 100 (121)
T ss_dssp HHHHHHHHH-GGGCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhcCCCCHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344444444 3456789999999999999998777766553
No 101
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=31.94 E-value=38 Score=29.62 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=29.7
Q ss_pred CeEEEEeCCcc-cccchHHHHHHHHH-hCCCCeEEEEEc
Q 018037 193 TVTFALYGDGA-ANQGQLFEALNIAA-LWDLPAILVCEN 229 (362)
Q Consensus 193 ~vvv~~~GDGa-~~~G~~~Ealn~A~-~~~LPvIfVv~N 229 (362)
..+|+++|+=+ ...+..|| +..|. ..++|||.|-.+
T Consensus 81 k~vIllIs~~T~~s~~v~wE-Ie~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 81 KNIILFLSSITANSRALREE-MNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp EEEEEECCTTCCCCHHHHHH-HHHHTTTTCCCEEEEETT
T ss_pred CcEEEEEecCccccchhHHH-HHHHHHhcCCcEEEEECC
Confidence 56889999988 44577776 99999 999999988766
No 102
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=31.64 E-value=1.1e+02 Score=25.33 Aligned_cols=39 Identities=13% Similarity=0.063 Sum_probs=31.2
Q ss_pred CCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC
Q 018037 190 KDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (362)
Q Consensus 190 ~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN 230 (362)
+++.++|++..-|.+.+ +.+++..|...+.|+|.|..|.
T Consensus 78 ~~~d~vI~iS~sG~t~~--~~~~~~~ak~~g~~vi~IT~~~ 116 (186)
T 1m3s_A 78 AEGDLVIIGSGSGETKS--LIHTAAKAKSLHGIVAALTINP 116 (186)
T ss_dssp CTTCEEEEECSSSCCHH--HHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCCEEEEEcCCCCcHH--HHHHHHHHHHCCCEEEEEECCC
Confidence 45678888888888754 7788999999999998777654
No 103
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=31.05 E-value=61 Score=23.41 Aligned_cols=28 Identities=29% Similarity=0.301 Sum_probs=24.0
Q ss_pred EEEeCCCHHHHHHHHHHHHHHhcc-CCCE
Q 018037 257 LKVDGMDALAVKQACKFAKEHALK-NGPM 284 (362)
Q Consensus 257 ~~VdG~D~~av~~a~~~A~~~ar~-~gP~ 284 (362)
++.-|.|.+++..++++.+..+|+ .|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 567789999999999999999998 7643
No 104
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=30.30 E-value=2.1e+02 Score=30.66 Aligned_cols=101 Identities=12% Similarity=0.255 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHhhCCCCCeEE--EEeCCcccccch--HHHHHHHHH--hC--CCCeEEEEEcCCcccccccccccCCchH
Q 018037 176 IPLGCGLAFAQKYSKDETVTF--ALYGDGAANQGQ--LFEALNIAA--LW--DLPAILVCENNHYGMGTAEWRAAKSPSY 247 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~~~vvv--~~~GDGa~~~G~--~~Ealn~A~--~~--~LPvIfVv~NN~~gi~t~~~~~~~~~~~ 247 (362)
++.|+|+|++ +++.++| +.+|| +.++. .++-+...+ .| ++|+++++...++|.+ +.+.+....+|
T Consensus 597 vG~a~G~A~~----G~~~~~i~eaqf~d--F~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G~G-p~Hs~~~~E~~ 669 (868)
T 2yic_A 597 VGFEYGYSVG----NPDAMVLWEAQFGD--FVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQG-PDHTSGRIERF 669 (868)
T ss_dssp HHHHHHHHHH----CTTSEEEEECSSGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSCCCHHHH
T ss_pred HHHHHHHHcc----CCCCceEEEEehHH--HHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCCCC-hhhcCCcHHHH
Confidence 4567777765 3444443 45555 33332 222232222 23 8899998886554522 33222212244
Q ss_pred hhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhcc-CCCEEE
Q 018037 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMIL 286 (362)
Q Consensus 248 ~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~-~gP~lI 286 (362)
... ..+|++.| .=.|+.+.+..++.++.. . ++|++|
T Consensus 670 l~l-~~~pnm~V~~Ps~p~~~~~lLr~a~~~--~~~~Pvii 707 (868)
T 2yic_A 670 LQL-WAEGSMTIAMPSTPANYFHLLRRHGKD--GIQRPLIV 707 (868)
T ss_dssp HHH-CCTTSCEEECCCSHHHHHHHHHHHHHS--SCCCCEEE
T ss_pred Hhc-CCCCCCEEEEeCCHHHHHHHHHHHHhc--CCCCcEEE
Confidence 321 23455544 446899999999887753 3 489876
No 105
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=28.93 E-value=1.6e+02 Score=27.55 Aligned_cols=22 Identities=23% Similarity=0.535 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCCCeEEEEEcC
Q 018037 209 LFEALNIAALWDLPAILVCENN 230 (362)
Q Consensus 209 ~~Ealn~A~~~~LPvIfVv~NN 230 (362)
-+.++.-|...++|+|-+|+-|
T Consensus 134 d~qAI~EA~~lnIPtIALvDTn 155 (305)
T 3iz6_A 134 DHQPIKESALGNIPTIAFCDTD 155 (305)
T ss_dssp THHHHHHHHHHTCCEEEEECTT
T ss_pred chHHHHHHHHcCCCEEEEEcCC
Confidence 3556777889999999999765
No 106
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=28.87 E-value=62 Score=27.36 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=28.6
Q ss_pred CCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEE
Q 018037 192 ETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE 228 (362)
Q Consensus 192 ~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~ 228 (362)
...+|+++.||..+.+...+++..+...++++..|-.
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igi 147 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGV 147 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEe
Confidence 4578999999998877778888888888877655543
No 107
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=27.59 E-value=64 Score=26.18 Aligned_cols=32 Identities=28% Similarity=0.202 Sum_probs=26.5
Q ss_pred CcceEEEeCCCHHHHHHHHHHHHHHhcc-CCCE
Q 018037 253 YVPGLKVDGMDALAVKQACKFAKEHALK-NGPM 284 (362)
Q Consensus 253 gi~g~~VdG~D~~av~~a~~~A~~~ar~-~gP~ 284 (362)
|+-.++..|.|.+++..|+++.+..+|+ -|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 4445778899999999999999999998 7654
No 108
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=26.81 E-value=2.8e+02 Score=24.64 Aligned_cols=141 Identities=11% Similarity=0.075 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHhhCCC--CCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEE-cCCcccccccccccCCchHhhhcC
Q 018037 176 IPLGCGLAFAQKYSKD--ETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEWRAAKSPSYYKRGD 252 (362)
Q Consensus 176 ~p~A~G~A~A~k~~~~--~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~-NN~~gi~t~~~~~~~~~~~~~~g~ 252 (362)
+-..+|-.+|.++... +--+|+-.--|+. .=+..+|...++|++++-- ...+|...... . .+ --
T Consensus 70 ~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi-----~~a~~lA~~L~~p~~~vrk~~k~~G~~~~i~----g-~~---~~ 136 (234)
T 3m3h_A 70 VRQTIAAGLEELIKEHFPTVEVIAGTATAGI-----AHAAWVSDRMDLPMCYVRSKAKGHGKGNQIE----G-KA---EK 136 (234)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEC---CH-----HHHHHHHHHHTCCEEEEC---------CCEE----S-CC---CT
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeccchH-----HHHHHHHHHcCCCEEEEEEeeccCCcceEEe----c-cc---CC
Confidence 3445677777665432 2223333322332 2235567788999876632 12233221110 0 00 01
Q ss_pred CcceEEEeCCCHHHHHHHHHHHHHHhccCCCEEEEEEE--ecCCCCCCCCCCCCCCChhhHHhHhhcCCH------HHHH
Q 018037 253 YVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDT--YRYHGHSMSDPGSTYRTRDEISGVRQERDP------IERI 324 (362)
Q Consensus 253 gi~g~~VdG~D~~av~~a~~~A~~~ar~~gP~lIe~~t--yR~~GHs~~D~~~~YR~~~e~~~~~~~~DP------i~~~ 324 (362)
|-..+-|| |+..-=.++.++++..++.|+.++.+.+ .|... + ..+.++ +..=| +..+
T Consensus 137 Gk~VLIVD--DvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~------~----~~e~l~---~~gi~v~sL~~~~dl 201 (234)
T 3m3h_A 137 GQKVVVVE--DLISTGGSAITCVEALREAGCEVLGIVSIFTYELE------A----GKEKLE---AANVASYSLSDYSAL 201 (234)
T ss_dssp TCEEEEEE--EEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCH------H----HHHHHH---HTTCCEEESSCHHHH
T ss_pred CCEEEEEe--cccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCc------h----HHHHHH---hcCCCEEEEeeHHHH
Confidence 33446666 4433334455555555556666665553 23110 0 011111 11111 3446
Q ss_pred HHHHHHcCCCCHHHHHHHHH
Q 018037 325 RKLILAHDLATEKELKDIEK 344 (362)
Q Consensus 325 ~~~L~~~g~~t~~el~~i~~ 344 (362)
-+++.+.|.+++++++.+++
T Consensus 202 ~~~~~~~~~i~~~~~~~~~~ 221 (234)
T 3m3h_A 202 TEVAAEKGIIGQAETKKLQE 221 (234)
T ss_dssp HHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHH
Confidence 67788899999998887653
No 109
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=26.78 E-value=1.3e+02 Score=27.16 Aligned_cols=21 Identities=29% Similarity=0.754 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCCeEEEEEcC
Q 018037 210 FEALNIAALWDLPAILVCENN 230 (362)
Q Consensus 210 ~Ealn~A~~~~LPvIfVv~NN 230 (362)
+-++.-|...++|+|-+|+-|
T Consensus 127 ~~ai~EA~~l~IPvIalvDTn 147 (241)
T 2xzm_B 127 FQAIKEASYVNIPVIALCDSD 147 (241)
T ss_dssp HHHHHHHTTTTCCEEECCCSS
T ss_pred hHHHHHHHHhCCCEEEEecCC
Confidence 456777889999999999755
No 110
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=26.42 E-value=2.5e+02 Score=31.06 Aligned_cols=103 Identities=12% Similarity=0.235 Sum_probs=56.2
Q ss_pred hhHHHHHHHHHHhhCCCCCeEE--EEeCCcccccch--HHHHHHHHH--hC--CCCeEEEEEcCCcccccccccccCCch
Q 018037 175 QIPLGCGLAFAQKYSKDETVTF--ALYGDGAANQGQ--LFEALNIAA--LW--DLPAILVCENNHYGMGTAEWRAAKSPS 246 (362)
Q Consensus 175 ~~p~A~G~A~A~k~~~~~~vvv--~~~GDGa~~~G~--~~Ealn~A~--~~--~LPvIfVv~NN~~gi~t~~~~~~~~~~ 246 (362)
.++.|+|+|++ +++.++| +.+||=. ++. .++-+...+ .| ++|+++++...+.|.+ +.+.+....+
T Consensus 841 ~vg~a~G~A~~----G~~~~~i~Eaqf~dF~--~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G~G-~~Hs~~~~E~ 913 (1113)
T 2xt6_A 841 AVGFEYGYSVG----NPDAMVLWEAQFGDFV--NGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQG-PDHTSGRIER 913 (1113)
T ss_dssp HHHHHHHHHHH----CTTSEEEEECSSGGGG--GGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSCCCHHH
T ss_pred HHHHHHHHHhc----CCCCceEEEEEEHHHH--hhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCCCC-hhhhcccHHH
Confidence 34667777765 3444444 4555533 332 122222222 23 8899998886554522 3332221223
Q ss_pred HhhhcCCcceEEE-eCCCHHHHHHHHHHHHHHhcc-CCCEEEE
Q 018037 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMILE 287 (362)
Q Consensus 247 ~~~~g~gi~g~~V-dG~D~~av~~a~~~A~~~ar~-~gP~lIe 287 (362)
|... ..+|++.| .=.|+.+.+..++.++.. . ++|++|-
T Consensus 914 ~l~l-~~~pnm~V~~Ps~~~~~~~lLr~a~~~--~~~~Pvii~ 953 (1113)
T 2xt6_A 914 FLQL-WAEGSMTIAMPSTPANYFHLLRRHGKD--GIQRPLIVF 953 (1113)
T ss_dssp HHHH-CCTTSCEEECCSSHHHHHHHHHHHHHS--SCCCCEEEE
T ss_pred HHhc-CCCCCcEEEecCCHHHHHHHHHHHHhc--cCCCCEEEE
Confidence 4321 33555554 446899999999887753 3 5898873
No 111
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=26.35 E-value=1.1e+02 Score=27.18 Aligned_cols=40 Identities=33% Similarity=0.472 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++.. ..|-+++|+++..++++++..++-++...
T Consensus 157 rda~~~lKk~~-K~~~isEDe~k~~e~eiQklTd~~i~~iD 196 (209)
T 4gfq_A 157 RDGNDDLKKLE-KAGEITEDDLRGYTEDIQKETDKYIAKVD 196 (209)
T ss_dssp HHHHHHHHHHH-HHTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666666654 45679999999999999888777666553
No 112
>3lhp_S 4E10_D0_1ISEA_004_N (T93); epitope-scaffold, immune system; 2.70A {Artificial gene} PDB: 1y69_8
Probab=24.51 E-value=63 Score=26.31 Aligned_cols=40 Identities=20% Similarity=0.161 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAK 358 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A~ 358 (362)
+|-...+++ |...|-+|+++....++++++..+.-++...
T Consensus 71 RDand~lKK-l~Kd~eiSEDe~k~~e~eIQKLTDkyIkkID 110 (123)
T 3lhp_S 71 RDANDKAAA-LGKDKEINWFDISQSLWDVQKLTDAAIKKIE 110 (123)
T ss_dssp HHHHHHHHH-GGGCTTSCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444 3456789999999999999988777666543
No 113
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=24.38 E-value=1.3e+02 Score=25.97 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=29.3
Q ss_pred CCCCeEEEEeCCcccccchHHHHHHHHHh--CCCCeEEEEEcC
Q 018037 190 KDETVTFALYGDGAANQGQLFEALNIAAL--WDLPAILVCENN 230 (362)
Q Consensus 190 ~~~~vvv~~~GDGa~~~G~~~Ealn~A~~--~~LPvIfVv~NN 230 (362)
+++.++|++..-|.+. .+.+++..|.. .+.++|.|..|.
T Consensus 105 ~~~DlvI~iS~SG~t~--~~i~~~~~ak~~~~Ga~vI~IT~~~ 145 (220)
T 3etn_A 105 QENDLLLLISNSGKTR--EIVELTQLAHNLNPGLKFIVITGNP 145 (220)
T ss_dssp CTTCEEEEECSSSCCH--HHHHHHHHHHHHCTTCEEEEEESCT
T ss_pred CCCCEEEEEcCCCCCH--HHHHHHHHHHhcCCCCeEEEEECCC
Confidence 4566788888777765 47788888888 888888777653
No 114
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=24.33 E-value=76 Score=28.56 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=25.7
Q ss_pred HHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 018037 311 ISGVRQERDPIERIRKLILAHDLATEKELKDIEKEV 346 (362)
Q Consensus 311 ~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~ 346 (362)
|+.|. .-+.+.|+++|++|++||++..+++
T Consensus 73 Ye~WL------~ale~lLvekGvit~~EL~~r~~~~ 102 (229)
T 3hht_B 73 YGHWI------ATVAYNLVDTGVLDEKELDERTEVF 102 (229)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 67774 5699999999999999999988774
No 115
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=23.71 E-value=92 Score=26.65 Aligned_cols=34 Identities=3% Similarity=-0.045 Sum_probs=23.8
Q ss_pred CeEEEEeCCcccccchHHHHHHHHHhCCCCeEEE
Q 018037 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILV 226 (362)
Q Consensus 193 ~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfV 226 (362)
+++|.+.||+....+...++...++..++.+.+|
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 3455666766555677888888888888876554
No 116
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=23.35 E-value=90 Score=26.11 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=27.2
Q ss_pred CeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC
Q 018037 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (362)
Q Consensus 193 ~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN 230 (362)
.++|+.++ ....|..+| +.+|...+.||+.+..++
T Consensus 79 D~vva~~~--~~d~Gt~~E-iGyA~algKPVi~l~~~~ 113 (165)
T 2khz_A 79 DVVVAEVT--QPSLGVGYE-LGRAVALGKPILCLFRPQ 113 (165)
T ss_dssp SEEEEECS--SCCHHHHHH-HHHHHHTCSSEEEEECTT
T ss_pred CEEEEECC--CCCCCHHHH-HHHHHHCCCEEEEEEcCC
Confidence 35566665 566788898 889999999999887665
No 117
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=23.09 E-value=1.1e+02 Score=25.03 Aligned_cols=40 Identities=10% Similarity=0.144 Sum_probs=32.6
Q ss_pred CCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCC
Q 018037 190 KDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH 231 (362)
Q Consensus 190 ~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~ 231 (362)
+++.++|++.--|.+.+ +.+++..|...+.|+|.|..|..
T Consensus 81 ~~~d~vi~iS~sG~t~~--~~~~~~~ak~~g~~vi~IT~~~~ 120 (180)
T 1jeo_A 81 EKDDLLILISGSGRTES--VLTVAKKAKNINNNIIAIVCECG 120 (180)
T ss_dssp CTTCEEEEEESSSCCHH--HHHHHHHHHTTCSCEEEEESSCC
T ss_pred CCCCEEEEEeCCCCcHH--HHHHHHHHHHCCCcEEEEeCCCC
Confidence 46778899988888764 78899999999999998876643
No 118
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=22.92 E-value=1e+02 Score=25.30 Aligned_cols=40 Identities=13% Similarity=0.273 Sum_probs=32.5
Q ss_pred CCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcCC
Q 018037 190 KDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH 231 (362)
Q Consensus 190 ~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN~ 231 (362)
+++.++|++.--|.+.+ ..+++..|...+.|+|.|..|..
T Consensus 95 ~~~d~vI~iS~sG~t~~--~~~~~~~ak~~g~~vi~IT~~~~ 134 (183)
T 2xhz_A 95 TPQDVVIAISNSGESSE--ITALIPVLKRLHVPLICITGRPE 134 (183)
T ss_dssp CTTCEEEEECSSSCCHH--HHHHHHHHHTTTCCEEEEESCTT
T ss_pred CCCCEEEEEeCCCCCHH--HHHHHHHHHHCCCCEEEEECCCC
Confidence 46778888888887764 78899999999999988876643
No 119
>3qyh_A CO-type nitrIle hydratase alpha subunit; cobalt, cysteine sulfinic acid, lyase; 2.00A {Pseudomonas putida} PDB: 3qyg_A 3qxe_A 3qz9_A 3qz5_A
Probab=22.82 E-value=1.1e+02 Score=27.37 Aligned_cols=28 Identities=7% Similarity=0.245 Sum_probs=23.5
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 018037 322 ERIRKLILAHDLATEKELKDIEKEVRKE 349 (362)
Q Consensus 322 ~~~~~~L~~~g~~t~~el~~i~~e~~~~ 349 (362)
..++..|+++|+++.++++++.+....+
T Consensus 41 ~Al~~lL~eKG~i~~~~~~~~~~~~e~~ 68 (226)
T 3qyh_A 41 KALESLLIEKGLVDPAAMDLVVQTYEHK 68 (226)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 4589999999999999999988766543
No 120
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=22.31 E-value=1.3e+02 Score=26.41 Aligned_cols=29 Identities=7% Similarity=0.306 Sum_probs=24.6
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 018037 321 IERIRKLILAHDLATEKELKDIEKEVRKE 349 (362)
Q Consensus 321 i~~~~~~L~~~g~~t~~el~~i~~e~~~~ 349 (362)
...++..|+++|+++.++++.+.+.....
T Consensus 20 ~~AL~~lL~eKGli~~~~id~~~~~~e~~ 48 (203)
T 1ugp_A 20 VKALESMLIEQGILTTSMIDRMAEIYENE 48 (203)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHhcc
Confidence 34799999999999999999988766655
No 121
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=21.38 E-value=53 Score=24.62 Aligned_cols=25 Identities=16% Similarity=0.225 Sum_probs=21.6
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHH
Q 018037 321 IERIRKLILAHDLATEKELKDIEKE 345 (362)
Q Consensus 321 i~~~~~~L~~~g~~t~~el~~i~~e 345 (362)
+..+-.+|+++|++|+++.+.|..+
T Consensus 24 v~~lld~L~~~~vlt~~~~e~I~~~ 48 (94)
T 2p1h_A 24 TSYIMDHMISDGFLTISEEEKVRNE 48 (94)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHcC
Confidence 4567788999999999999999875
No 122
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=20.87 E-value=3.3e+02 Score=23.24 Aligned_cols=24 Identities=0% Similarity=0.252 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHH
Q 018037 321 IERIRKLILAHDLATEKELKDIEK 344 (362)
Q Consensus 321 i~~~~~~L~~~g~~t~~el~~i~~ 344 (362)
+..+-+++.+.|.+++++++.+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~ 194 (205)
T 2wns_A 171 LSKMLEILEQQKKVDAETVGRVKR 194 (205)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHH
Confidence 456778888899999999988874
No 123
>1ugp_B NitrIle hydratase beta subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: b.34.4.4 PDB: 1ire_B 1ugq_B 1ugr_B 1ugs_B
Probab=20.78 E-value=1e+02 Score=27.68 Aligned_cols=32 Identities=9% Similarity=-0.173 Sum_probs=25.9
Q ss_pred hHHhHhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018037 310 EISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVR 347 (362)
Q Consensus 310 e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~e~~ 347 (362)
=|+.|. .-+.+.|+++|++|++||++..++..
T Consensus 68 YYe~Wl------~ale~lLvekGvit~~EL~ar~~~~~ 99 (226)
T 1ugp_B 68 YYWHWI------RTYIHHGVRTGKIDLEELERRTQYYR 99 (226)
T ss_dssp HHHHHH------HHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHH------HHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 367774 56999999999999999988766653
No 124
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=20.67 E-value=1.1e+02 Score=25.76 Aligned_cols=39 Identities=18% Similarity=0.208 Sum_probs=26.5
Q ss_pred CCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC
Q 018037 190 KDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (362)
Q Consensus 190 ~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN 230 (362)
+++.++|++..-|.+.+ +.+++..|...+.++|.|..|.
T Consensus 91 ~~~dvvI~iS~sG~t~~--~~~~~~~ak~~g~~vi~IT~~~ 129 (201)
T 3fxa_A 91 QKEDILILISKGGNTGE--LLNLIPACKTKGSTLIGVTENP 129 (201)
T ss_dssp CTTCEEEEECSSSCCHH--HHTTHHHHHHHTCEEEEEESCT
T ss_pred CCCCEEEEEeCCCCCHH--HHHHHHHHHHcCCeEEEEECCC
Confidence 45567777777666543 6677777777788777766553
No 125
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=20.44 E-value=98 Score=26.85 Aligned_cols=36 Identities=28% Similarity=0.303 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018037 318 RDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKA 357 (362)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~e~~~~v~~a~~~A 357 (362)
+|-...+++.. | +++|+.+..++++++..++-++..
T Consensus 135 rda~~~lKk~~---k-iseD~~k~~e~~iQkltd~~i~~i 170 (184)
T 1ge9_A 135 REAKEMIEELE---G-ISEDEKKRALERLQKLTDKYIDEI 170 (184)
T ss_dssp HHHHHHHHHST---T-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc---C-CChhHHHHHHHHHHHHHHHHHHHH
Confidence 46666666632 6 899999999999988877666554
No 126
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=20.16 E-value=1.2e+02 Score=19.53 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=13.3
Q ss_pred HHHHHHHcC-CCCHHHHHHH
Q 018037 324 IRKLILAHD-LATEKELKDI 342 (362)
Q Consensus 324 ~~~~L~~~g-~~t~~el~~i 342 (362)
+.+.+-+++ -+|++||++|
T Consensus 12 ~~~ei~~RNrpltDEeLD~m 31 (39)
T 3lqv_P 12 WEREIDERNRPLSDEELDAM 31 (39)
T ss_dssp HHHHHHHTTCCCCHHHHHHT
T ss_pred hhccchhhcCCCCHHHHHHh
Confidence 566665444 4899999875
No 127
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=20.09 E-value=1.1e+02 Score=25.30 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=32.7
Q ss_pred CCCCCeEEEEeCCcccccchHHHHHHHHHhCCCCeEEEEEcC
Q 018037 189 SKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (362)
Q Consensus 189 ~~~~~vvv~~~GDGa~~~G~~~Ealn~A~~~~LPvIfVv~NN 230 (362)
.+++.++|++.--|...+ +.+++..|...+.|+|.|..|.
T Consensus 108 ~~~~Dvvi~iS~sG~t~~--~~~~~~~ak~~g~~vi~iT~~~ 147 (188)
T 1tk9_A 108 GNEKDVLIGISTSGKSPN--VLEALKKAKELNMLCLGLSGKG 147 (188)
T ss_dssp CCTTCEEEEECSSSCCHH--HHHHHHHHHHTTCEEEEEEEGG
T ss_pred CCCCCEEEEEeCCCCCHH--HHHHHHHHHHCCCEEEEEeCCC
Confidence 456778888888887754 7899999999999999888763
Done!