Query 018039
Match_columns 362
No_of_seqs 177 out of 730
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 08:56:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018039.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018039hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jhna4 b.29.1.12 (A:61-262,A: 100.0 9.4E-82 6.8E-86 593.2 9.6 221 14-236 5-244 (249)
2 d1jhna3 b.104.1.1 (A:270-411) 100.0 2.2E-39 1.6E-43 279.7 11.1 108 201-308 3-135 (142)
3 d1k9ca_ b.104.1.1 (A:) Calreti 100.0 1.3E-30 9.4E-35 202.6 6.5 73 204-277 2-74 (74)
4 d1jhna3 b.104.1.1 (A:270-411) 99.9 6.8E-26 5E-30 195.1 8.0 106 191-301 29-142 (142)
5 d1k9ca_ b.104.1.1 (A:) Calreti 99.8 8.6E-20 6.3E-24 141.4 5.9 63 221-291 2-74 (74)
6 d1k91a_ b.104.1.1 (A:) Calreti 99.5 5.7E-16 4.1E-20 105.0 -0.2 36 237-272 2-37 (37)
7 d1k91a_ b.104.1.1 (A:) Calreti 98.4 2E-08 1.4E-12 67.6 1.3 29 219-247 2-36 (37)
8 d1jhna4 b.29.1.12 (A:61-262,A: 97.3 2.1E-06 1.5E-10 79.1 -5.8 38 220-258 211-248 (249)
9 d1oq1a_ b.29.1.17 (A:) Hypothe 76.3 7.4 0.00054 31.5 9.6 74 16-107 7-81 (223)
10 d2b5ib2 b.1.2.1 (B:104-207) In 43.4 28 0.002 24.0 6.2 80 108-188 1-83 (104)
11 d1ud9a2 d.131.1.2 (A:127-245) 35.5 6.9 0.0005 29.4 1.6 23 84-113 93-115 (119)
12 d2d9qb2 b.1.2.1 (B:204-308) Gr 32.8 23 0.0017 25.0 4.2 69 126-199 23-96 (105)
13 d2fa8a1 c.47.1.23 (A:4-89) Hyp 32.6 14 0.001 27.6 2.9 22 171-192 38-59 (86)
14 d1iz5a2 d.131.1.2 (A:126-246) 27.3 19 0.0014 26.9 3.0 23 84-113 97-119 (121)
15 d2erfa1 b.29.1.4 (A:10-215) Th 26.9 39 0.0028 26.8 5.1 60 138-198 97-156 (206)
16 d1plqa2 d.131.1.2 (A:127-258) 23.3 18 0.0013 27.4 2.2 22 84-113 104-125 (132)
17 d2vkwa2 b.1.2.1 (A:601-693) Ne 20.5 82 0.006 21.3 5.3 59 126-187 17-76 (93)
No 1
>d1jhna4 b.29.1.12 (A:61-262,A:412-458) Calnexin {Dog (Canis familiaris) [TaxId: 9615]}
Probab=100.00 E-value=9.4e-82 Score=593.20 Aligned_cols=221 Identities=33% Similarity=0.568 Sum_probs=198.6
Q ss_pred ccceeeeeeccCCCccCCCeEecccccCCC------CCCcEEEeccccCCCCCCcceeeccccceeeecccCCC-cCCCC
Q 018039 14 ISVSEIFFEERFDDGWRSRWVISDWKRSEG------KAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPE-FSNKN 86 (362)
Q Consensus 14 ~~~~~~~F~E~F~~~~~~rWv~S~~~k~~~------~~G~w~~~~g~~~g~~~d~GL~~~~~a~~yaIs~~l~~-~~~~~ 86 (362)
.+++.+||+|+|+++|.+|||+|++++++. +.|+|.+.+++..+.++|+||||+++|||||||++|++ |++++
T Consensus 5 ~~~~~v~F~E~Fd~~~~~rWi~S~akk~~~~~~~~~y~G~W~~~~~~~~~~~~DkGL~~~~~ak~yaIs~~l~~pf~~~~ 84 (249)
T d1jhna4 5 VPSGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLNKPFLFDT 84 (249)
T ss_dssp CCCSCCSSEECCCSSSCCSCCCCCCC-----------CCEEECCBCTTCSSTTCBCCEEECSSCCCEEEEEEEEEECSSS
T ss_pred CCCcceeEEeccCCcccCCCEECcccccCcccceeeccceeeeecccccCCCCcccceecccchhhhhhccCCCCcccCC
Confidence 457899999999999999999999987542 56888877777778889999999999999999999998 99999
Q ss_pred CceEEEEEEeeeceeeecCceEEecccc--cccccccCCCCeeEEEcccccCCCCceEEEEEeecCCc------cccccC
Q 018039 87 RTLVVQYSIRFEQDIECGGGYIKLLSAY--VNQKKFGGDAPYSLMFGPDICGTQKKHLHVILSYQGQN------YPIKKE 158 (362)
Q Consensus 87 k~LVvQYeVk~q~~i~CGGaYiKLl~~~--~d~~~f~~~tpY~IMFGPD~CG~~~~kvHfI~~~~~~~------~~~~~~ 158 (362)
|+||||||||+|++++|||||||||+.+ +++++|+++|||+||||||+|| .++||||||||+|.+ ++++++
T Consensus 85 k~LVvQYeVk~q~~~~CGGaYiKLl~~~~~~~~~~f~~~TpY~IMFGPD~CG-~~~kvHfIf~~~np~~~~~eek~~~~p 163 (249)
T d1jhna4 85 KPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRP 163 (249)
T ss_dssp SCEEEEEEECCTTCCSEEECCEEEEBCCSSCCGGGCCSSCCEEEEEEEEEES-SCCEEEEEEEEECTTTCCEEEECCCCC
T ss_pred CCEEEEEEeeeccCccccceEEEeecCcccCCHhHcCCCCCceEEeCCcccC-CCCEEEEEEEcCCCCCccceeeeecCC
Confidence 9999999999999999999999999864 6899999999999999999999 789999999998753 233433
Q ss_pred ----CcccccCcCceeEEEECCCCcEEEEEcCeEeccCCCccCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCCC
Q 018039 159 ----LECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDWDILPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGY 234 (362)
Q Consensus 159 ----~~~~~d~~tHlYTLil~pdntyei~ID~~~~~~gsl~~Dwd~~~p~~I~DP~d~KP~DWdd~~~I~Dp~a~KP~dW 234 (362)
+.+++|++||||||||+|||||||+|||+++.+|+|. +|.+.||++|+||.++||+||+|+++|+||+|+||+||
T Consensus 164 ~~~~~~~~~D~~tHLYTLIi~pdntfeI~iDg~~~~~G~le-~~~~~p~~~i~dp~~~KP~DW~d~~~I~dp~~~kpedW 242 (249)
T d1jhna4 164 DADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLE-PFKMTPFSAIGLELWSMTSDIFFDNFIVCGDRRVVDDW 242 (249)
T ss_dssp SSCCTHHHHSCSCEEEEEEEETTTEEEEEETTEEEEEECCC-TTCCCCEEEEEECCCCSSSCCBCEEEEEESSSHHHHHH
T ss_pred CccccccCcCCCcccceEEECCCCeEEEEeCCccccCCCcC-cccCCCcccCCCcccCCCCCccccccccCCCcCChhhh
Confidence 3466899999999999999999999999999999975 68899999999999999999999999999999999999
Q ss_pred CC
Q 018039 235 DS 236 (362)
Q Consensus 235 dd 236 (362)
|+
T Consensus 243 de 244 (249)
T d1jhna4 243 AN 244 (249)
T ss_dssp HH
T ss_pred hh
Confidence 97
No 2
>d1jhna3 b.104.1.1 (A:270-411) Calnexin {Dog (Canis familiaris) [TaxId: 9615]}
Probab=100.00 E-value=2.2e-39 Score=279.69 Aligned_cols=108 Identities=47% Similarity=0.975 Sum_probs=71.2
Q ss_pred CCCccccCCCCCCCCCCCCCccccCCCCCCCCCCC--------------------CCCCCCCCCCCCCCCCCCCCCCCCC
Q 018039 201 LPPRKIKAVNAKKPADWDDREYIDDPNAVKPEGYD--------------------SIPKEIPDPKAKKPDNWDEDEDGLW 260 (362)
Q Consensus 201 ~~p~~I~DP~d~KP~DWdd~~~I~Dp~a~KP~dWd--------------------d~p~~I~dP~~~kP~dwd~~~~G~W 260 (362)
+||++|+||+++||+|||++++|+||+|+||+||| ++|++|+||+|+||++||++++|+|
T Consensus 3 ~Ppk~I~Dp~d~KP~DWdd~~~I~Dp~a~KPeDWde~~p~~IpDp~a~kP~~W~~dep~~I~DP~a~KP~dWdde~dGeW 82 (142)
T d1jhna3 3 NPSREIEDPEDQKPEDWDERPKIPDPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEW 82 (142)
T ss_dssp SSCCCCBCTTCCCCTTCCCCSEEECSSCCCCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCC
T ss_pred CCcccCCCcCcCCCccccccccCCCccccCCccccccccccCCCccccCCccccccCccccCCccccCCCcccccccCcc
Confidence 44555555555555555555555555555555553 4789999999999999999999988
Q ss_pred CCCCCCCCCCC-----ccCccCcccCCCCCCcccccccCCCCCCCCCCccccc
Q 018039 261 KPPKIPNPAYK-----GPWRPKRIKNPNYKGKWKIPYIDNPEFEDDPDLYVLK 308 (362)
Q Consensus 261 ~~p~I~NP~yk-----G~W~p~~I~NP~YkG~W~p~~I~NP~y~~d~~~~~~~ 308 (362)
++|+|.||+|+ |+|++++|.||+|+|+|++++|.||+|++...+.++.
T Consensus 83 e~P~i~NP~c~~~~gCG~W~~p~i~NP~YKG~W~~p~I~NPnYkG~W~p~~Ip 135 (142)
T d1jhna3 83 EAPQIANPKCESAPGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIP 135 (142)
T ss_dssp CCCBCCCGGGTTSSCBSSCCCCEEECTTCCCSCCCCEEECTTCCCSCCCCBCC
T ss_pred cCCcCCCcccccccCccccccccccCccccccccCCcccCCCCcCCcCCCcCC
Confidence 88877766663 5566666666666666666666666666555554443
No 3
>d1k9ca_ b.104.1.1 (A:) Calreticulin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.96 E-value=1.3e-30 Score=202.65 Aligned_cols=73 Identities=59% Similarity=1.247 Sum_probs=70.3
Q ss_pred ccccCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCccC
Q 018039 204 RKIKAVNAKKPADWDDREYIDDPNAVKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKGPWRPK 277 (362)
Q Consensus 204 ~~I~DP~d~KP~DWdd~~~I~Dp~a~KP~dWdd~p~~I~dP~~~kP~dwd~~~~G~W~~p~I~NP~ykG~W~p~ 277 (362)
++|+||+++||+|||++++|+||+|+||++||+ |++|+||+|+||++||++++|+|+||||+||+|+|+|+|+
T Consensus 2 k~I~DP~~~KPeDWde~~~I~Dp~a~KPedWDe-p~~I~Dp~A~KP~dWd~e~dGeWe~P~I~NP~ykG~WkPr 74 (74)
T d1k9ca_ 2 KKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPR 74 (74)
T ss_dssp CCCCCCSSCCTTSCTTTSCCSCSSTTCCTTTSC-CSEEECSSCCCCTTCCTTTTCSCCCCEEECSSCCCSCCCC
T ss_pred CccCCcCcCCCCCccccccCCCccccCCCCCCC-ccccCCCCccCCCCCCccccCCccCCcCCCcccCcccCCC
Confidence 789999999999999999999999999999986 9999999999999999999999999999999999999875
No 4
>d1jhna3 b.104.1.1 (A:270-411) Calnexin {Dog (Canis familiaris) [TaxId: 9615]}
Probab=99.92 E-value=6.8e-26 Score=195.05 Aligned_cols=106 Identities=43% Similarity=0.854 Sum_probs=96.5
Q ss_pred cCCCccCCCCCCCccccCCCCCCCCCCCC--CccccCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018039 191 SGSMYTDWDILPPRKIKAVNAKKPADWDD--REYIDDPNAVKPEGYDS------IPKEIPDPKAKKPDNWDEDEDGLWKP 262 (362)
Q Consensus 191 ~gsl~~Dwd~~~p~~I~DP~d~KP~DWdd--~~~I~Dp~a~KP~dWdd------~p~~I~dP~~~kP~dwd~~~~G~W~~ 262 (362)
+..+++||+...|.+|+||+++||++|++ .++|+||+|+||+|||+ ++++|+||.|+ +...||+|++
T Consensus 29 ~a~KPeDWde~~p~~IpDp~a~kP~~W~~dep~~I~DP~a~KP~dWdde~dGeWe~P~i~NP~c~-----~~~gCG~W~~ 103 (142)
T d1jhna3 29 DAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCE-----SAPGCGVWQR 103 (142)
T ss_dssp SCCCCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGT-----TSSCBSSCCC
T ss_pred cccCCccccccccccCCCccccCCccccccCccccCCccccCCCcccccccCcccCCcCCCcccc-----cccCcccccc
Confidence 45589999998999999999999999954 57999999999999997 47788887775 6778999999
Q ss_pred CCCCCCCCCccCccCcccCCCCCCcccccccCCCCCCCC
Q 018039 263 PKIPNPAYKGPWRPKRIKNPNYKGKWKIPYIDNPEFEDD 301 (362)
Q Consensus 263 p~I~NP~ykG~W~p~~I~NP~YkG~W~p~~I~NP~y~~d 301 (362)
+||.||+|||+|++++|+||+|+|+|+||+|+||+|++|
T Consensus 104 p~i~NP~YKG~W~~p~I~NPnYkG~W~p~~IpNP~y~eD 142 (142)
T d1jhna3 104 PMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFED 142 (142)
T ss_dssp CEEECTTCCCSCCCCEEECTTCCCSCCCCBCCCTTCCCC
T ss_pred ccccCccccccccCCcccCCCCcCCcCCCcCCCCCcCCC
Confidence 999999999999999999999999999999999999986
No 5
>d1k9ca_ b.104.1.1 (A:) Calreticulin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.77 E-value=8.6e-20 Score=141.39 Aligned_cols=63 Identities=48% Similarity=1.060 Sum_probs=57.1
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------CCccCccCcccCCCCCCcccc
Q 018039 221 EYIDDPNAVKPEGYDSIPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPA----------YKGPWRPKRIKNPNYKGKWKI 290 (362)
Q Consensus 221 ~~I~Dp~a~KP~dWdd~p~~I~dP~~~kP~dwd~~~~G~W~~p~I~NP~----------ykG~W~p~~I~NP~YkG~W~p 290 (362)
++|+||+++||+|||+ .++|+||+++||++||+ +.+|++|+ .+|+|+||+|+||+|+|.|+|
T Consensus 2 k~I~DP~~~KPeDWde-~~~I~Dp~a~KPedWDe-------p~~I~Dp~A~KP~dWd~e~dGeWe~P~I~NP~ykG~WkP 73 (74)
T d1k9ca_ 2 KKIKDPDAAKPEDWDE-RAKIDDPTDSKPEDWDK-------PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKP 73 (74)
T ss_dssp CCCCCCSSCCTTSCTT-TSCCSCSSTTCCTTTSC-------CSEEECSSCCCCTTCCTTTTCSCCCCEEECSSCCCSCCC
T ss_pred CccCCcCcCCCCCccc-cccCCCccccCCCCCCC-------ccccCCCCccCCCCCCccccCCccCCcCCCcccCcccCC
Confidence 5899999999999998 57999999999999975 66888774 579999999999999999998
Q ss_pred c
Q 018039 291 P 291 (362)
Q Consensus 291 ~ 291 (362)
|
T Consensus 74 r 74 (74)
T d1k9ca_ 74 R 74 (74)
T ss_dssp C
T ss_pred C
Confidence 6
No 6
>d1k91a_ b.104.1.1 (A:) Calreticulin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.51 E-value=5.7e-16 Score=105.04 Aligned_cols=36 Identities=64% Similarity=1.352 Sum_probs=33.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 018039 237 IPKEIPDPKAKKPDNWDEDEDGLWKPPKIPNPAYKG 272 (362)
Q Consensus 237 ~p~~I~dP~~~kP~dwd~~~~G~W~~p~I~NP~ykG 272 (362)
+|++|+||+|+||+|||++++|+|+||+|+||+|||
T Consensus 2 eP~~IpDp~A~kP~dWdee~DGeWe~P~I~NP~~kG 37 (37)
T d1k91a_ 2 KPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKG 37 (37)
T ss_dssp CCSEEECSSCCSCTTCCHHHHCSCCCCEEECTTCCC
T ss_pred CccccCCCCCCCCCccccccCCCCcCCccCCCCcCC
Confidence 588999999999999999999999999999999998
No 7
>d1k91a_ b.104.1.1 (A:) Calreticulin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.44 E-value=2e-08 Score=67.57 Aligned_cols=29 Identities=45% Similarity=0.704 Sum_probs=23.7
Q ss_pred CCccccCCCCCCCCCCCC------CCCCCCCCCCC
Q 018039 219 DREYIDDPNAVKPEGYDS------IPKEIPDPKAK 247 (362)
Q Consensus 219 d~~~I~Dp~a~KP~dWdd------~p~~I~dP~~~ 247 (362)
++++|+||+|+||+|||+ ++++|+||+|+
T Consensus 2 eP~~IpDp~A~kP~dWdee~DGeWe~P~I~NP~~k 36 (37)
T d1k91a_ 2 KPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYK 36 (37)
T ss_dssp CCSEEECSSCCSCTTCCHHHHCSCCCCEEECTTCC
T ss_pred CccccCCCCCCCCCccccccCCCCcCCccCCCCcC
Confidence 356788888888888886 69999999986
No 8
>d1jhna4 b.29.1.12 (A:61-262,A:412-458) Calnexin {Dog (Canis familiaris) [TaxId: 9615]}
Probab=97.32 E-value=2.1e-06 Score=79.07 Aligned_cols=38 Identities=16% Similarity=-0.019 Sum_probs=34.1
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 018039 220 REYIDDPNAVKPEGYDSIPKEIPDPKAKKPDNWDEDEDG 258 (362)
Q Consensus 220 ~~~I~Dp~a~KP~dWdd~p~~I~dP~~~kP~dwd~~~~G 258 (362)
.+.|.||.++||+||++ .++|+||+++||+|||++.-|
T Consensus 211 ~~~i~dp~~~KP~DW~d-~~~I~dp~~~kpedWdedt~~ 248 (249)
T d1jhna4 211 FSAIGLELWSMTSDIFF-DNFIVCGDRRVVDDWANDGWG 248 (249)
T ss_dssp EEEEEECCCCSSSCCBC-EEEEEESSSHHHHHHHHHTTT
T ss_pred cccCCCcccCCCCCccc-cccccCCCcCChhhhhhhccc
Confidence 36899999999999998 779999999999999987644
No 9
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]}
Probab=76.29 E-value=7.4 Score=31.54 Aligned_cols=74 Identities=11% Similarity=0.154 Sum_probs=43.4
Q ss_pred ceeeeeeccCCCc-cCCCeEecccccCCCCCCcEEEeccccCCCCCCcceeeccccceeeecccCCCcCCCCCceEEEEE
Q 018039 16 VSEIFFEERFDDG-WRSRWVISDWKRSEGKAGYFKHTAGKWHGDPDDKGIQTHTDARHYAISAKIPEFSNKNRTLVVQYS 94 (362)
Q Consensus 16 ~~~~~F~E~F~~~-~~~rWv~S~~~k~~~~~G~w~~~~g~~~g~~~d~GL~~~~~a~~yaIs~~l~~~~~~~k~LVvQYe 94 (362)
-+++.|.+.|-.+ -.+.|.... .|+|.+..|...+... .+..++.+-. .+- .-++++|.|+
T Consensus 7 ~g~~l~~~~l~n~kdL~gW~~~g-------~g~~~vedG~L~~~~~-------~~~~~~~~~~--~~~--~~~df~l~~e 68 (223)
T d1oq1a_ 7 EGACLYRNPLRSKSDVKDWRMEG-------GGQISFDDHSLHLSHV-------QDEAHFVFWC--PET--FPDGIIVTWD 68 (223)
T ss_dssp EEEEEEEECCCSGGGGTTCEEEE-------SEEEECGGGSEEEEES-------STTCCEEEEC--CCC--BCSSEEEEEE
T ss_pred CccEEEecCCCCCCCCCCCeeCC-------CCEEEEECCEEEEecc-------CCCCCceeec--CCc--ccCcEEEEEE
Confidence 3789999999775 567797531 3788888886544211 1112222111 010 1157999999
Q ss_pred EeeeceeeecCce
Q 018039 95 IRFEQDIECGGGY 107 (362)
Q Consensus 95 Vk~q~~i~CGGaY 107 (362)
+|+..+-.=|+.|
T Consensus 69 ~k~~~~~~~g~~f 81 (223)
T d1oq1a_ 69 FSPIEQPGLCMLF 81 (223)
T ss_dssp EEEEECSEEEEEE
T ss_pred EEEccCCCcEEEE
Confidence 9998764333333
No 10
>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.41 E-value=28 Score=23.97 Aligned_cols=80 Identities=9% Similarity=0.148 Sum_probs=41.6
Q ss_pred EEecccc-cccccccCCCCeeEEEcccccCC-CCceEEEEEeecCCccccccCCcccccCcCceeEEE-ECCCCcEEEEE
Q 018039 108 IKLLSAY-VNQKKFGGDAPYSLMFGPDICGT-QKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFI-LRPDASYSILI 184 (362)
Q Consensus 108 iKLl~~~-~d~~~f~~~tpY~IMFGPD~CG~-~~~kvHfI~~~~~~~~~~~~~~~~~~d~~tHlYTLi-l~pdntyei~I 184 (362)
|||++.. +...+.+. +-..|-.-+=.|.. ....+++.+++...................+-|+|. |.|+..|+++|
T Consensus 1 ~rl~pP~~l~v~~~~~-~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV 79 (104)
T d2b5ib2 1 LRLMAPISLQVVHVET-HRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQV 79 (104)
T ss_dssp BCCCCCEEEEEEEECS-SCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEE
T ss_pred CccCCCCCcEEEEEeC-CEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcEEEEECCCCCCCEEEEEE
Confidence 4666542 34444443 34566665554431 234567777775433222221111112223345554 88999999998
Q ss_pred cCeE
Q 018039 185 DNRE 188 (362)
Q Consensus 185 D~~~ 188 (362)
=...
T Consensus 80 ra~~ 83 (104)
T d2b5ib2 80 RVKP 83 (104)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8653
No 11
>d1ud9a2 d.131.1.2 (A:127-245) Proliferating cell nuclear antigen (PCNA) {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=35.51 E-value=6.9 Score=29.45 Aligned_cols=23 Identities=22% Similarity=0.569 Sum_probs=18.3
Q ss_pred CCCCceEEEEEEeeeceeeecCceEEeccc
Q 018039 84 NKNRTLVVQYSIRFEQDIECGGGYIKLLSA 113 (362)
Q Consensus 84 ~~~k~LVvQYeVk~q~~i~CGGaYiKLl~~ 113 (362)
..+.||.++|++ .+||||+++=+
T Consensus 93 ~~d~Pl~l~y~l-------~~~g~i~f~lA 115 (119)
T d1ud9a2 93 ADQKPMQLEFNM-------EGGGKVTYLLA 115 (119)
T ss_dssp CTTSCEEEEEEC-------GGGCEEEEEEC
T ss_pred CCCcCEEEEEEe-------CCCeEEEEEEe
Confidence 457999999987 36789998744
No 12
>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.76 E-value=23 Score=24.99 Aligned_cols=69 Identities=16% Similarity=0.155 Sum_probs=36.1
Q ss_pred eeEEEcc--cccCCCCceEEEEEeecCCc--cccccCCcccccCcCceeEEE-ECCCCcEEEEEcCeEeccCCCccCCC
Q 018039 126 YSLMFGP--DICGTQKKHLHVILSYQGQN--YPIKKELECETDKLTHFYTFI-LRPDASYSILIDNRERDSGSMYTDWD 199 (362)
Q Consensus 126 Y~IMFGP--D~CG~~~~kvHfI~~~~~~~--~~~~~~~~~~~d~~tHlYTLi-l~pdntyei~ID~~~~~~gsl~~Dwd 199 (362)
..|-..| +-+| ..+++.|+|+... ...... ...+...+-|+|. |.|+-.|+++|--....--....||.
T Consensus 23 v~l~W~pp~~~~~---~~~~y~i~y~~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~G~~S~wS 96 (105)
T d2d9qb2 23 LQLSWEPWQPGLH---INQKCELRHKPQRGEASWALV--GPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWS 96 (105)
T ss_dssp EEEEEECCGGGTT---SCEEEEEEEEESSSCCCCEEE--EEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCC
T ss_pred EEEEEcCCCCCCc---eeEEEEEEEEecCCccceeee--ecccCCcceeEEecccCCeEEEEEEEEEeCCCCCCCcCCC
Confidence 4444544 3333 4577888876321 111111 1112233446664 88999999999865433223456774
No 13
>d2fa8a1 c.47.1.23 (A:4-89) Hypothetical protein Atu0228 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=32.56 E-value=14 Score=27.59 Aligned_cols=22 Identities=14% Similarity=0.131 Sum_probs=19.0
Q ss_pred EEEECCCCcEEEEEcCeEeccC
Q 018039 171 TFILRPDASYSILIDNRERDSG 192 (362)
Q Consensus 171 TLil~pdntyei~ID~~~~~~g 192 (362)
||+-...++|+|.|||+.+.+-
T Consensus 38 sL~P~~~G~FeV~v~g~li~sr 59 (86)
T d2fa8a1 38 SLIPSTGGLFEITVDGTIIWER 59 (86)
T ss_dssp EEEEECTTCEEEEETTEEEEEH
T ss_pred EEEECCCeEEEEEECCEEEEEe
Confidence 7887778999999999998753
No 14
>d1iz5a2 d.131.1.2 (A:126-246) Proliferating cell nuclear antigen (PCNA) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=27.25 E-value=19 Score=26.93 Aligned_cols=23 Identities=22% Similarity=0.379 Sum_probs=18.0
Q ss_pred CCCCceEEEEEEeeeceeeecCceEEeccc
Q 018039 84 NKNRTLVVQYSIRFEQDIECGGGYIKLLSA 113 (362)
Q Consensus 84 ~~~k~LVvQYeVk~q~~i~CGGaYiKLl~~ 113 (362)
.++.+|+|+|++ ..||||+++=+
T Consensus 97 ~~~~Pl~l~y~~-------~~~g~i~f~LA 119 (121)
T d1iz5a2 97 GNEMPMQMEYYI-------RDEGRLTFLLA 119 (121)
T ss_dssp CTTCCEEEEEEE-------TTTEEEEEEEC
T ss_pred cCCCCEEEEEEe-------CCCcEEEEEEc
Confidence 457999999987 35789998743
No 15
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.87 E-value=39 Score=26.80 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=39.4
Q ss_pred CCceEEEEEeecCCccccccCCcccccCcCceeEEEECCCCcEEEEEcCeEeccCCCccCC
Q 018039 138 QKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSILIDNRERDSGSMYTDW 198 (362)
Q Consensus 138 ~~~kvHfI~~~~~~~~~~~~~~~~~~d~~tHlYTLil~pdntyei~ID~~~~~~gsl~~Dw 198 (362)
..+.++|.++..+.............|..=|-.++.+. .++..++|||+.+.+..+....
T Consensus 97 ~~~~l~~~~~~~~~~~~~~~~~~~l~d~~Whhva~~~~-~~~v~lyvD~~~~~~~~~~~~~ 156 (206)
T d2erfa1 97 KAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQ-EDRAQLYIDCEKMENAELDVPI 156 (206)
T ss_dssp TTTEEEEEEEETTEEEEEEESSCCCCSSSEEEEEEEEE-TTEEEEEETTTEEEEEECSSCG
T ss_pred CCCEEEEEEeCCCceEEEEeccccccCCCEEEEEEEEe-CCEEEEEECCEEEEeEEccCCc
Confidence 46788888877654333332222345566666777766 5789999999998876655443
No 16
>d1plqa2 d.131.1.2 (A:127-258) Proliferating cell nuclear antigen (PCNA) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.29 E-value=18 Score=27.41 Aligned_cols=22 Identities=14% Similarity=0.498 Sum_probs=17.5
Q ss_pred CCCCceEEEEEEeeeceeeecCceEEeccc
Q 018039 84 NKNRTLVVQYSIRFEQDIECGGGYIKLLSA 113 (362)
Q Consensus 84 ~~~k~LVvQYeVk~q~~i~CGGaYiKLl~~ 113 (362)
..+.+|+++|++ |+|||+++=+
T Consensus 104 ~~~~Pl~~~y~i--------~~g~l~fyLA 125 (132)
T d1plqa2 104 SSEAPALFQFDL--------KSGFLQFFLA 125 (132)
T ss_dssp CSSSCEEEEEEE--------TTEEEEEEEC
T ss_pred eCCCCEEEEEEe--------CCEEEEEEEC
Confidence 357999999987 3589998855
No 17
>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.53 E-value=82 Score=21.29 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=31.4
Q ss_pred eeEEEcccccCCCCceEEEEEeecCCccccccCCcccccCcCceeEEE-ECCCCcEEEEEcCe
Q 018039 126 YSLMFGPDICGTQKKHLHVILSYQGQNYPIKKELECETDKLTHFYTFI-LRPDASYSILIDNR 187 (362)
Q Consensus 126 Y~IMFGPD~CG~~~~kvHfI~~~~~~~~~~~~~~~~~~d~~tHlYTLi-l~pdntyei~ID~~ 187 (362)
..|-+-|-..| .....|++++|+........ .........-|++- |.|+.+|+|+|=..
T Consensus 17 v~l~W~~p~~~-~~~I~~Y~i~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 76 (93)
T d2vkwa2 17 IKVNLIKQDDG-GSPIRHYLVRYRALSSEWKP--EIRLPSGSDHVMLKSLDWNAEYEVYVVAE 76 (93)
T ss_dssp EEEEEECCCCT-TSCCCEEEEEEEETTSCCCC--CEEECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred EEEEeeCCCCC-cCceEEEEEEeeecCcceee--eeeccCCceEEEEeccccceEEEEEEEEE
Confidence 55666554444 34456777776532211111 11122223346654 78899999998644
Done!