Query 018042
Match_columns 361
No_of_seqs 297 out of 2738
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 05:39:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018042.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018042hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 3.4E-36 7.3E-41 268.3 26.9 329 18-360 2-342 (485)
2 TIGR00887 2A0109 phosphate:H+ 100.0 3.1E-34 6.8E-39 266.8 18.1 324 18-359 7-371 (502)
3 PRK10077 xylE D-xylose transpo 100.0 2E-32 4.2E-37 254.1 28.9 320 21-359 6-342 (479)
4 TIGR01299 synapt_SV2 synaptic 100.0 3.4E-33 7.3E-38 264.4 22.6 272 22-315 162-474 (742)
5 KOG0254 Predicted transporter 100.0 2.5E-32 5.5E-37 254.2 26.3 322 20-360 38-366 (513)
6 TIGR00879 SP MFS transporter, 100.0 6.9E-31 1.5E-35 243.5 26.6 326 19-359 20-355 (481)
7 COG2271 UhpC Sugar phosphate p 100.0 3.2E-32 7E-37 232.8 14.0 297 19-355 21-322 (448)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.6E-31 7.9E-36 240.1 20.8 299 25-355 6-311 (412)
9 PRK10642 proline/glycine betai 100.0 6.8E-31 1.5E-35 243.6 20.4 286 28-359 17-322 (490)
10 COG2814 AraJ Arabinose efflux 100.0 1.1E-30 2.5E-35 226.3 17.2 267 26-357 12-280 (394)
11 PRK10406 alpha-ketoglutarate t 100.0 5.2E-30 1.1E-34 234.3 20.4 281 22-358 17-314 (432)
12 PF00083 Sugar_tr: Sugar (and 100.0 1.2E-35 2.7E-40 273.5 -16.9 316 31-360 4-323 (451)
13 TIGR00891 2A0112 putative sial 100.0 2.1E-29 4.6E-34 228.8 20.8 304 21-359 6-310 (405)
14 PRK12307 putative sialic acid 100.0 2.4E-29 5.3E-34 230.0 17.9 288 24-359 15-302 (426)
15 TIGR00898 2A0119 cation transp 100.0 2.4E-29 5.2E-34 234.9 17.6 274 70-359 112-391 (505)
16 PRK09556 uhpT sugar phosphate 100.0 8.2E-30 1.8E-34 235.2 13.4 297 22-357 24-328 (467)
17 PRK11663 regulatory protein Uh 100.0 5E-29 1.1E-33 227.9 18.1 286 22-350 18-306 (434)
18 PRK11551 putative 3-hydroxyphe 100.0 8.8E-29 1.9E-33 224.8 19.4 279 23-358 11-290 (406)
19 PRK09952 shikimate transporter 100.0 5.5E-28 1.2E-32 221.1 20.2 281 26-359 21-322 (438)
20 PRK15075 citrate-proton sympor 100.0 5E-28 1.1E-32 221.4 18.8 274 28-358 16-309 (434)
21 PRK14995 methyl viologen resis 100.0 2E-28 4.4E-33 227.3 16.0 303 25-359 4-331 (495)
22 PRK03545 putative arabinose tr 100.0 5.7E-28 1.2E-32 218.2 17.8 241 70-356 32-274 (390)
23 TIGR00894 2A0114euk Na(+)-depe 100.0 9.6E-28 2.1E-32 221.7 18.6 308 21-354 13-328 (465)
24 TIGR00895 2A0115 benzoate tran 100.0 6.6E-28 1.4E-32 218.3 15.6 301 26-355 16-317 (398)
25 TIGR00903 2A0129 major facilit 100.0 5.2E-27 1.1E-31 208.9 19.5 239 70-353 14-253 (368)
26 PRK09705 cynX putative cyanate 100.0 7.9E-27 1.7E-31 210.7 19.9 244 70-359 32-276 (393)
27 KOG1330 Sugar transporter/spin 100.0 5.1E-29 1.1E-33 215.3 4.8 279 23-352 29-312 (493)
28 PRK10213 nepI ribonucleoside t 99.9 1.2E-26 2.6E-31 209.4 20.0 238 70-353 43-282 (394)
29 PRK03893 putative sialic acid 99.9 3.3E-26 7.1E-31 213.4 23.1 311 23-359 16-347 (496)
30 PLN00028 nitrate transmembrane 99.9 5.8E-27 1.3E-31 216.3 17.7 252 70-353 59-318 (476)
31 KOG2533 Permease of the major 99.9 1.2E-26 2.7E-31 210.0 16.5 289 25-350 43-336 (495)
32 TIGR00893 2A0114 d-galactonate 99.9 6.2E-27 1.3E-31 211.7 14.3 264 70-354 17-282 (399)
33 TIGR00890 2A0111 Oxalate/Forma 99.9 5E-27 1.1E-31 211.0 13.6 250 70-359 26-276 (377)
34 PRK03699 putative transporter; 99.9 3E-26 6.5E-31 207.2 18.0 269 27-358 7-276 (394)
35 PRK10091 MFS transport protein 99.9 2.9E-26 6.4E-31 206.4 17.0 243 70-358 26-270 (382)
36 PRK15402 multidrug efflux syst 99.9 4.1E-26 8.8E-31 207.3 16.7 281 19-359 5-287 (406)
37 PRK11273 glpT sn-glycerol-3-ph 99.9 5.2E-26 1.1E-30 209.1 17.3 258 70-351 52-317 (452)
38 TIGR00711 efflux_EmrB drug res 99.9 7.8E-27 1.7E-31 217.0 11.8 299 29-359 4-327 (485)
39 KOG2532 Permease of the major 99.9 8.5E-26 1.8E-30 204.1 17.9 256 74-353 65-324 (466)
40 PRK15034 nitrate/nitrite trans 99.9 9.7E-26 2.1E-30 202.4 17.0 239 75-359 63-322 (462)
41 PRK10133 L-fucose transporter; 99.9 1.2E-25 2.6E-30 205.1 17.7 252 70-358 49-330 (438)
42 TIGR00710 efflux_Bcr_CflA drug 99.9 5.3E-26 1.1E-30 205.2 15.1 248 70-358 28-277 (385)
43 TIGR00881 2A0104 phosphoglycer 99.9 2.7E-26 5.9E-31 206.4 11.0 261 70-352 18-281 (379)
44 TIGR00886 2A0108 nitrite extru 99.9 1.6E-25 3.5E-30 200.6 15.7 257 73-357 28-295 (366)
45 PRK15403 multidrug efflux syst 99.9 3.9E-25 8.5E-30 200.7 18.2 236 70-343 39-276 (413)
46 KOG0253 Synaptic vesicle trans 99.9 2E-25 4.4E-30 186.9 14.7 309 22-359 73-417 (528)
47 TIGR00805 oat sodium-independe 99.9 2.9E-26 6.3E-31 216.7 10.0 270 70-353 56-397 (633)
48 PF07690 MFS_1: Major Facilita 99.9 8.5E-26 1.8E-30 201.2 12.3 251 72-356 22-276 (352)
49 KOG0255 Synaptic vesicle trans 99.9 1.5E-24 3.3E-29 203.1 19.9 268 75-359 111-386 (521)
50 PRK11102 bicyclomycin/multidru 99.9 9.8E-25 2.1E-29 196.4 17.0 251 70-359 14-266 (377)
51 TIGR00712 glpT glycerol-3-phos 99.9 6.4E-25 1.4E-29 201.1 15.8 255 77-353 56-317 (438)
52 PRK10473 multidrug efflux syst 99.9 1.9E-24 4E-29 195.5 16.2 248 70-359 26-275 (392)
53 TIGR00900 2A0121 H+ Antiporter 99.9 8.8E-25 1.9E-29 195.6 12.9 247 75-358 27-282 (365)
54 PRK03633 putative MFS family t 99.9 7.3E-24 1.6E-28 190.8 18.6 257 34-358 13-270 (381)
55 TIGR00885 fucP L-fucose:H+ sym 99.9 4.2E-24 9.1E-29 193.3 16.9 267 31-357 7-303 (410)
56 PRK11043 putative transporter; 99.9 3.9E-24 8.5E-29 194.0 16.4 243 70-356 29-271 (401)
57 KOG0252 Inorganic phosphate tr 99.9 1.4E-24 3E-29 187.3 12.0 321 20-360 34-385 (538)
58 TIGR00897 2A0118 polyol permea 99.9 1.9E-23 4.2E-28 189.3 19.5 245 74-356 40-290 (402)
59 PRK10504 putative transporter; 99.9 1.4E-23 2.9E-28 194.5 18.5 294 32-359 15-333 (471)
60 TIGR00896 CynX cyanate transpo 99.9 1.8E-23 4E-28 186.5 17.6 243 70-356 23-266 (355)
61 TIGR00883 2A0106 metabolite-pr 99.9 1.2E-23 2.7E-28 190.1 16.2 243 80-357 28-289 (394)
62 COG2223 NarK Nitrate/nitrite t 99.9 3.2E-24 7E-29 184.3 10.5 248 70-359 37-290 (417)
63 PRK12382 putative transporter; 99.9 1E-22 2.2E-27 184.2 20.8 236 73-359 42-285 (392)
64 PRK11195 lysophospholipid tran 99.9 2.9E-23 6.3E-28 187.3 16.6 247 74-359 30-277 (393)
65 PRK05122 major facilitator sup 99.9 2.2E-23 4.8E-28 189.0 15.8 235 73-358 42-284 (399)
66 PRK11652 emrD multidrug resist 99.9 8.5E-23 1.8E-27 184.8 18.7 240 70-352 31-272 (394)
67 TIGR00892 2A0113 monocarboxyla 99.9 2E-23 4.3E-28 191.8 14.4 260 70-350 42-303 (455)
68 PRK09874 drug efflux system pr 99.9 1.3E-22 2.9E-27 184.4 18.2 151 74-228 41-197 (408)
69 TIGR00899 2A0120 sugar efflux 99.9 1.6E-22 3.4E-27 181.9 17.8 242 73-358 24-270 (375)
70 cd06174 MFS The Major Facilita 99.9 1.6E-22 3.5E-27 179.8 15.6 222 72-358 24-247 (352)
71 TIGR00901 2A0125 AmpG-related 99.9 3.5E-22 7.6E-27 178.4 16.4 254 70-358 11-280 (356)
72 PRK10054 putative transporter; 99.9 7.4E-22 1.6E-26 178.3 16.7 243 73-359 34-280 (395)
73 PRK11010 ampG muropeptide tran 99.9 1.1E-21 2.4E-26 181.5 17.4 244 74-357 39-293 (491)
74 TIGR00806 rfc RFC reduced fola 99.9 4.1E-21 9E-26 169.7 19.3 160 70-234 49-212 (511)
75 PRK10489 enterobactin exporter 99.9 1E-21 2.2E-26 179.1 11.9 244 75-358 45-294 (417)
76 PRK11646 multidrug resistance 99.9 7.2E-21 1.6E-25 172.2 16.6 149 74-226 38-187 (400)
77 PRK15011 sugar efflux transpor 99.9 3.6E-20 7.7E-25 167.5 18.6 240 73-358 42-287 (393)
78 KOG2615 Permease of the major 99.8 1.9E-20 4.2E-25 158.2 14.0 150 78-228 64-217 (451)
79 PRK11902 ampG muropeptide tran 99.8 3.7E-20 8.1E-25 167.9 17.0 245 74-357 26-280 (402)
80 COG2807 CynX Cyanate permease 99.8 3.5E-19 7.6E-24 150.2 20.1 241 70-355 35-275 (395)
81 TIGR00902 2A0127 phenyl propri 99.8 3.5E-20 7.6E-25 166.9 15.3 244 72-359 29-276 (382)
82 PRK08633 2-acyl-glycerophospho 99.8 3.6E-20 7.7E-25 189.4 16.6 248 81-359 46-305 (1146)
83 PRK11128 putative 3-phenylprop 99.8 7.6E-20 1.6E-24 164.7 15.0 242 74-359 31-276 (382)
84 PRK06814 acylglycerophosphoeth 99.8 1.2E-19 2.6E-24 185.1 16.2 240 82-357 52-295 (1140)
85 COG0738 FucP Fucose permease [ 99.8 4E-19 8.7E-24 152.1 15.3 249 70-357 36-306 (422)
86 PTZ00207 hypothetical protein; 99.8 6.7E-19 1.4E-23 162.8 17.2 155 70-231 50-214 (591)
87 KOG3764 Vesicular amine transp 99.8 8E-20 1.7E-24 155.4 9.8 238 75-355 99-338 (464)
88 TIGR00882 2A0105 oligosacchari 99.8 6.6E-19 1.4E-23 159.5 16.5 248 74-359 30-290 (396)
89 KOG2504 Monocarboxylate transp 99.8 5.5E-20 1.2E-24 168.5 9.3 274 71-354 70-364 (509)
90 PF06609 TRI12: Fungal trichot 99.8 2.7E-18 5.8E-23 157.9 18.3 143 74-221 71-213 (599)
91 PRK09528 lacY galactoside perm 99.8 2.2E-18 4.7E-23 157.3 16.0 247 74-358 38-297 (420)
92 TIGR00792 gph sugar (Glycoside 99.8 3.4E-19 7.4E-24 163.6 8.6 251 72-359 25-293 (437)
93 PRK10207 dipeptide/tripeptide 99.8 3.9E-17 8.5E-22 150.7 18.6 137 74-213 42-182 (489)
94 TIGR00889 2A0110 nucleoside tr 99.8 1.2E-17 2.7E-22 151.8 14.7 243 72-359 28-287 (418)
95 PRK10642 proline/glycine betai 99.7 4.9E-17 1.1E-21 151.2 15.8 183 75-262 279-469 (490)
96 TIGR00924 yjdL_sub1_fam amino 99.7 4.9E-16 1.1E-20 143.4 18.4 140 77-219 43-186 (475)
97 TIGR02718 sider_RhtX_FptX side 99.7 1.6E-16 3.5E-21 143.6 13.6 247 71-359 25-280 (390)
98 KOG2563 Permease of the major 99.7 9.1E-16 2E-20 133.3 14.5 279 20-352 38-330 (480)
99 PF05977 MFS_3: Transmembrane 99.7 9.5E-16 2.1E-20 141.4 15.2 241 80-358 43-289 (524)
100 TIGR01301 GPH_sucrose GPH fami 99.7 1.8E-15 4E-20 137.3 15.5 154 75-228 32-222 (477)
101 TIGR00880 2_A_01_02 Multidrug 99.6 4.8E-15 1.1E-19 113.5 11.9 135 89-226 5-140 (141)
102 PF03137 OATP: Organic Anion T 99.6 4.5E-17 9.7E-22 150.7 -0.6 274 70-351 26-370 (539)
103 KOG2325 Predicted transporter/ 99.6 3.5E-14 7.6E-19 126.8 17.5 190 19-230 29-235 (488)
104 PRK09669 putative symporter Ya 99.6 1.8E-15 4E-20 139.0 9.4 247 74-359 37-300 (444)
105 PRK09584 tppB putative tripept 99.6 2.4E-14 5.2E-19 133.0 16.5 141 74-217 49-193 (500)
106 PF13347 MFS_2: MFS/sugar tran 99.6 1.8E-15 3.8E-20 138.5 8.8 249 74-360 29-297 (428)
107 PRK10429 melibiose:sodium symp 99.6 5.6E-15 1.2E-19 136.7 11.7 251 74-358 34-301 (473)
108 TIGR01299 synapt_SV2 synaptic 99.6 5.2E-14 1.1E-18 134.5 15.6 141 84-228 597-737 (742)
109 TIGR00788 fbt folate/biopterin 99.6 1.5E-14 3.3E-19 133.1 11.7 265 70-359 49-324 (468)
110 KOG3626 Organic anion transpor 99.6 3.7E-15 8.1E-20 138.3 6.5 265 70-351 120-457 (735)
111 TIGR00889 2A0110 nucleoside tr 99.5 2.5E-13 5.5E-18 123.6 14.8 149 80-228 249-406 (418)
112 PRK15011 sugar efflux transpor 99.5 7.4E-13 1.6E-17 119.8 17.4 149 74-226 244-392 (393)
113 PRK15462 dipeptide/tripeptide 99.5 4.5E-13 9.8E-18 122.3 14.9 142 74-218 37-182 (493)
114 PF03825 Nuc_H_symport: Nucleo 99.5 1.2E-12 2.6E-17 117.4 16.2 246 77-360 32-280 (400)
115 PRK11462 putative transporter; 99.5 1E-12 2.2E-17 121.0 15.3 244 74-357 37-297 (460)
116 TIGR01272 gluP glucose/galacto 99.5 4.2E-13 9.2E-18 116.9 11.3 191 130-358 5-213 (310)
117 KOG4686 Predicted sugar transp 99.5 2.7E-14 5.9E-19 116.6 3.3 259 71-358 68-335 (459)
118 PRK09528 lacY galactoside perm 99.4 1.5E-12 3.3E-17 118.9 14.2 148 78-228 258-407 (420)
119 cd06174 MFS The Major Facilita 99.4 4.3E-12 9.4E-17 112.7 14.9 145 77-224 206-351 (352)
120 PRK11551 putative 3-hydroxyphe 99.4 3.8E-12 8.3E-17 115.8 14.6 148 75-224 248-395 (406)
121 TIGR00890 2A0111 Oxalate/Forma 99.4 2.1E-12 4.6E-17 116.0 12.4 140 75-217 233-374 (377)
122 PF11700 ATG22: Vacuole efflux 99.4 1.1E-11 2.5E-16 113.3 17.2 247 82-358 70-354 (477)
123 PF05631 DUF791: Protein of un 99.4 1.5E-11 3.3E-16 105.3 16.5 232 75-343 62-300 (354)
124 PRK09848 glucuronide transport 99.4 1.4E-12 3E-17 120.2 11.0 245 74-359 36-300 (448)
125 PRK05122 major facilitator sup 99.4 8.9E-12 1.9E-16 113.1 15.7 141 84-227 251-391 (399)
126 TIGR00899 2A0120 sugar efflux 99.4 1.4E-11 3E-16 110.8 15.9 148 75-226 228-375 (375)
127 PRK10077 xylE D-xylose transpo 99.4 1.8E-11 3.8E-16 113.9 15.9 155 74-228 298-461 (479)
128 TIGR00892 2A0113 monocarboxyla 99.4 5.2E-12 1.1E-16 116.4 11.8 142 76-219 270-415 (455)
129 PRK12382 putative transporter; 99.4 2.7E-11 5.9E-16 109.7 15.7 136 84-222 251-386 (392)
130 COG2211 MelB Na+/melibiose sym 99.4 3.4E-12 7.3E-17 114.0 9.3 247 74-359 40-308 (467)
131 PRK09556 uhpT sugar phosphate 99.3 2.1E-11 4.7E-16 112.9 14.1 150 74-223 286-447 (467)
132 PRK09952 shikimate transporter 99.3 6E-11 1.3E-15 108.9 16.2 152 75-227 279-435 (438)
133 PRK03699 putative transporter; 99.3 6.4E-11 1.4E-15 107.3 15.1 148 75-226 234-381 (394)
134 PRK03633 putative MFS family t 99.3 5.6E-11 1.2E-15 107.2 14.0 142 77-224 230-371 (381)
135 PF03209 PUCC: PUCC protein; 99.3 7.8E-11 1.7E-15 102.6 13.7 247 74-356 7-278 (403)
136 TIGR00879 SP MFS transporter, 99.3 3E-11 6.4E-16 112.1 12.1 151 75-228 312-474 (481)
137 TIGR00902 2A0127 phenyl propri 99.3 1.5E-10 3.4E-15 104.3 16.3 140 76-220 234-374 (382)
138 PRK09705 cynX putative cyanate 99.3 1.4E-10 3.1E-15 104.9 15.9 148 77-228 235-385 (393)
139 PRK09874 drug efflux system pr 99.3 7.7E-11 1.7E-15 107.3 14.3 137 84-223 260-396 (408)
140 PRK10489 enterobactin exporter 99.3 1.2E-10 2.5E-15 106.4 15.4 149 77-228 254-403 (417)
141 TIGR00883 2A0106 metabolite-pr 99.3 4.6E-11 1E-15 107.9 12.6 138 75-214 248-390 (394)
142 PRK03893 putative sialic acid 99.3 2.1E-11 4.5E-16 114.0 10.3 136 75-213 304-441 (496)
143 PF11700 ATG22: Vacuole efflux 99.3 1.6E-10 3.5E-15 105.8 15.4 151 74-226 309-469 (477)
144 PRK03545 putative arabinose tr 99.3 1.9E-10 4E-15 104.1 15.6 144 75-223 234-378 (390)
145 COG3104 PTR2 Dipeptide/tripept 99.2 1.8E-10 3.8E-15 102.4 13.5 146 76-224 55-205 (498)
146 TIGR00893 2A0114 d-galactonate 99.2 1.6E-10 3.4E-15 104.4 13.5 143 75-221 244-395 (399)
147 TIGR00887 2A0109 phosphate:H+ 99.2 3.9E-10 8.4E-15 105.5 15.7 140 89-228 342-492 (502)
148 TIGR00891 2A0112 putative sial 99.2 1.9E-10 4.1E-15 104.4 13.1 133 75-209 267-400 (405)
149 TIGR00898 2A0119 cation transp 99.2 5.7E-10 1.2E-14 104.6 16.4 136 88-228 361-498 (505)
150 PF01306 LacY_symp: LacY proto 99.2 2.8E-11 6.2E-16 107.0 6.9 242 77-359 38-295 (412)
151 PF06813 Nodulin-like: Nodulin 99.2 6.7E-10 1.4E-14 92.1 14.4 153 70-227 25-184 (250)
152 COG2270 Permeases of the major 99.2 3.9E-10 8.5E-15 98.1 13.2 249 80-360 56-325 (438)
153 COG2270 Permeases of the major 99.2 4E-10 8.6E-15 98.1 12.8 152 74-227 280-431 (438)
154 TIGR00897 2A0118 polyol permea 99.2 7.1E-10 1.5E-14 100.8 15.3 144 76-224 251-400 (402)
155 PLN00028 nitrate transmembrane 99.2 2.4E-10 5.2E-15 106.0 11.2 146 75-225 281-433 (476)
156 KOG0569 Permease of the major 99.2 3.4E-09 7.5E-14 95.8 17.9 151 74-228 297-458 (485)
157 TIGR00895 2A0115 benzoate tran 99.1 2.5E-10 5.5E-15 103.3 10.8 120 74-193 277-396 (398)
158 PRK11273 glpT sn-glycerol-3-ph 99.1 1.9E-09 4.1E-14 99.5 15.2 145 75-222 282-432 (452)
159 PRK10504 putative transporter; 99.1 1.6E-09 3.4E-14 100.7 14.6 120 77-196 292-414 (471)
160 PRK11128 putative 3-phenylprop 99.1 2.5E-09 5.3E-14 96.5 15.4 136 77-217 235-371 (382)
161 TIGR00900 2A0121 H+ Antiporter 99.1 1.1E-09 2.4E-14 97.9 12.7 120 77-196 242-362 (365)
162 PRK11010 ampG muropeptide tran 99.1 2.4E-09 5.2E-14 99.6 15.3 150 75-227 251-405 (491)
163 PRK10406 alpha-ketoglutarate t 99.1 2.9E-09 6.3E-14 97.7 15.5 149 75-226 272-425 (432)
164 TIGR00792 gph sugar (Glycoside 99.1 1.2E-08 2.7E-13 93.7 19.5 117 80-196 255-379 (437)
165 PRK12307 putative sialic acid 99.1 1.5E-09 3.2E-14 99.5 13.3 120 78-197 262-383 (426)
166 PF05977 MFS_3: Transmembrane 99.1 1.9E-09 4.2E-14 99.9 14.0 143 75-220 247-389 (524)
167 TIGR00882 2A0105 oligosacchari 99.1 3.6E-09 7.8E-14 95.9 15.2 140 78-220 250-390 (396)
168 PRK15075 citrate-proton sympor 99.1 5.8E-09 1.3E-13 95.8 16.2 123 76-198 268-395 (434)
169 KOG2816 Predicted transporter 99.1 1.3E-09 2.9E-14 98.9 11.6 241 90-359 70-314 (463)
170 PF01770 Folate_carrier: Reduc 99.1 3.4E-09 7.3E-14 93.5 13.6 265 77-343 35-307 (412)
171 PRK08633 2-acyl-glycerophospho 99.0 2.4E-09 5.2E-14 110.3 13.6 140 75-216 261-401 (1146)
172 TIGR02718 sider_RhtX_FptX side 99.0 1.2E-08 2.6E-13 92.3 15.8 141 76-219 237-385 (390)
173 COG2814 AraJ Arabinose efflux 99.0 7.6E-09 1.6E-13 90.9 13.8 149 70-223 235-384 (394)
174 PRK11663 regulatory protein Uh 99.0 4.5E-09 9.8E-14 96.5 12.5 145 75-223 272-422 (434)
175 PRK09848 glucuronide transport 99.0 3.6E-08 7.9E-13 90.9 18.1 119 77-195 259-386 (448)
176 PRK10054 putative transporter; 99.0 6.5E-09 1.4E-13 94.2 12.7 147 78-228 240-388 (395)
177 KOG4686 Predicted sugar transp 99.0 5.8E-09 1.3E-13 85.8 10.9 146 74-221 292-438 (459)
178 PRK11646 multidrug resistance 99.0 1.3E-08 2.9E-13 92.3 13.6 140 80-219 241-382 (400)
179 PRK15402 multidrug efflux syst 98.9 3.8E-08 8.3E-13 89.6 16.2 139 75-217 244-387 (406)
180 TIGR00896 CynX cyanate transpo 98.9 1.8E-08 3.8E-13 90.0 13.7 122 77-199 227-350 (355)
181 TIGR01272 gluP glucose/galacto 98.9 5.7E-08 1.2E-12 84.8 16.2 131 76-212 172-302 (310)
182 TIGR00901 2A0125 AmpG-related 98.9 1.3E-08 2.9E-13 90.8 12.1 105 77-181 239-355 (356)
183 COG2271 UhpC Sugar phosphate p 98.9 1.5E-08 3.3E-13 88.3 11.6 145 74-221 280-430 (448)
184 TIGR00712 glpT glycerol-3-phos 98.9 1.4E-08 3.1E-13 93.3 12.0 149 76-227 281-436 (438)
185 TIGR00711 efflux_EmrB drug res 98.9 2.2E-08 4.7E-13 93.4 13.3 121 75-195 284-408 (485)
186 COG0477 ProP Permeases of the 98.9 2.9E-08 6.4E-13 86.2 13.2 134 82-216 39-176 (338)
187 PRK10091 MFS transport protein 98.9 3.3E-08 7.1E-13 89.2 13.7 143 75-221 228-372 (382)
188 TIGR02332 HpaX 4-hydroxyphenyl 98.9 1E-08 2.3E-13 93.4 10.5 134 78-213 275-409 (412)
189 PF01306 LacY_symp: LacY proto 98.9 1E-07 2.2E-12 84.7 16.3 144 80-226 257-402 (412)
190 PRK10213 nepI ribonucleoside t 98.9 7.3E-08 1.6E-12 87.3 15.8 141 74-218 244-384 (394)
191 TIGR00710 efflux_Bcr_CflA drug 98.9 8.1E-08 1.7E-12 86.6 16.1 116 75-191 235-356 (385)
192 PRK06814 acylglycerophosphoeth 98.9 2.3E-08 5E-13 102.9 13.5 136 76-213 255-410 (1140)
193 PRK14995 methyl viologen resis 98.9 3.4E-08 7.3E-13 92.3 13.4 122 74-195 287-411 (495)
194 TIGR00894 2A0114euk Na(+)-depe 98.9 5.2E-08 1.1E-12 90.4 14.3 150 75-225 290-450 (465)
195 PRK11195 lysophospholipid tran 98.9 6E-08 1.3E-12 87.8 14.1 120 75-195 234-354 (393)
196 TIGR00788 fbt folate/biopterin 98.9 3.4E-08 7.3E-13 91.3 12.6 152 75-226 281-447 (468)
197 PRK11902 ampG muropeptide tran 98.8 8.9E-08 1.9E-12 87.0 14.9 144 74-224 237-389 (402)
198 KOG2504 Monocarboxylate transp 98.8 1.2E-08 2.6E-13 94.2 9.2 152 72-225 323-476 (509)
199 TIGR00926 2A1704 Peptide:H+ sy 98.8 2.4E-07 5.3E-12 88.1 17.9 147 75-221 16-178 (654)
200 PF03825 Nuc_H_symport: Nucleo 98.8 1.4E-07 3E-12 85.0 15.4 149 79-227 240-398 (400)
201 TIGR00903 2A0129 major facilit 98.8 1.7E-07 3.6E-12 84.0 15.3 140 78-226 223-366 (368)
202 PF07690 MFS_1: Major Facilita 98.8 4.9E-08 1.1E-12 86.8 11.7 115 74-188 234-352 (352)
203 KOG0253 Synaptic vesicle trans 98.8 3.5E-08 7.7E-13 84.3 9.4 129 92-225 391-519 (528)
204 TIGR00881 2A0104 phosphoglycer 98.8 3.6E-08 7.9E-13 88.5 10.0 131 74-207 244-379 (379)
205 PRK10429 melibiose:sodium symp 98.8 6.4E-07 1.4E-11 83.2 18.4 116 80-195 264-391 (473)
206 PRK10133 L-fucose transporter; 98.8 2.5E-07 5.3E-12 85.0 14.9 136 74-215 287-423 (438)
207 COG2223 NarK Nitrate/nitrite t 98.7 3E-08 6.4E-13 86.5 7.7 146 74-222 246-398 (417)
208 PRK10473 multidrug efflux syst 98.7 4.6E-07 9.9E-12 82.1 14.9 114 75-190 232-346 (392)
209 PRK09669 putative symporter Ya 98.7 3.1E-06 6.8E-11 78.0 19.9 114 83-196 265-387 (444)
210 PRK11102 bicyclomycin/multidru 98.7 1.3E-06 2.7E-11 78.7 16.5 116 76-192 224-344 (377)
211 PF03092 BT1: BT1 family; Int 98.7 5.7E-08 1.2E-12 88.7 7.5 153 70-226 13-177 (433)
212 KOG0252 Inorganic phosphate tr 98.6 2.4E-08 5.1E-13 87.8 3.8 133 93-228 359-501 (538)
213 PF13347 MFS_2: MFS/sugar tran 98.6 4.8E-07 1E-11 83.0 11.3 115 82-196 260-383 (428)
214 PF05978 UNC-93: Ion channel r 98.6 3.4E-06 7.4E-11 64.8 13.6 115 80-195 35-149 (156)
215 COG2807 CynX Cyanate permease 98.6 2.7E-06 5.9E-11 73.0 14.2 150 71-223 232-383 (395)
216 PRK15034 nitrate/nitrite trans 98.6 1.6E-06 3.6E-11 78.9 13.6 134 88-223 292-452 (462)
217 PRK09584 tppB putative tripept 98.5 1.9E-06 4.1E-11 80.5 14.3 138 84-221 318-475 (500)
218 PRK11043 putative transporter; 98.5 3.8E-06 8.3E-11 76.3 16.0 119 76-195 232-355 (401)
219 TIGR00924 yjdL_sub1_fam amino 98.5 2.4E-06 5.1E-11 79.3 14.7 136 84-222 314-465 (475)
220 COG2211 MelB Na+/melibiose sym 98.4 7.6E-06 1.6E-10 73.8 14.8 116 78-193 268-392 (467)
221 KOG3762 Predicted transporter 98.4 6.4E-07 1.4E-11 80.5 7.0 143 76-221 400-543 (618)
222 PRK11652 emrD multidrug resist 98.4 1.2E-05 2.5E-10 73.0 15.5 118 77-195 238-358 (394)
223 KOG3098 Uncharacterized conser 98.4 2.1E-05 4.6E-10 71.0 16.5 107 88-195 56-162 (461)
224 PF06779 DUF1228: Protein of u 98.4 7.4E-07 1.6E-11 60.1 5.4 69 70-138 15-83 (85)
225 PRK10207 dipeptide/tripeptide 98.4 6.5E-06 1.4E-10 76.6 13.4 138 85-222 312-473 (489)
226 KOG0254 Predicted transporter 98.4 2.3E-05 5.1E-10 73.6 17.2 141 85-228 332-487 (513)
227 KOG0637 Sucrose transporter an 98.4 7.4E-07 1.6E-11 78.6 6.2 120 75-194 60-202 (498)
228 KOG3764 Vesicular amine transp 98.4 1.2E-06 2.5E-11 76.1 7.1 144 76-222 300-451 (464)
229 PF03209 PUCC: PUCC protein; 98.4 6.8E-05 1.5E-09 66.1 18.0 150 70-219 232-392 (403)
230 PF00083 Sugar_tr: Sugar (and 98.3 8E-09 1.7E-13 95.4 -7.1 150 74-228 280-440 (451)
231 TIGR00769 AAA ADP/ATP carrier 98.3 5.6E-05 1.2E-09 69.1 17.7 116 80-195 41-189 (472)
232 TIGR00886 2A0108 nitrite extru 98.3 2E-06 4.4E-11 77.0 7.9 108 75-183 254-365 (366)
233 KOG2532 Permease of the major 98.3 6.4E-06 1.4E-10 75.5 11.1 146 77-224 289-446 (466)
234 TIGR00885 fucP L-fucose:H+ sym 98.3 2.3E-05 4.9E-10 71.4 14.6 131 80-213 267-400 (410)
235 PRK11462 putative transporter; 98.3 7.4E-05 1.6E-09 69.1 17.7 112 83-194 264-384 (460)
236 TIGR01301 GPH_sucrose GPH fami 98.2 3.7E-05 8.1E-10 70.6 14.6 142 86-228 309-475 (477)
237 KOG0255 Synaptic vesicle trans 98.1 0.00017 3.7E-09 68.0 16.9 134 92-229 360-497 (521)
238 PF06963 FPN1: Ferroportin1 (F 98.1 0.00032 6.8E-09 63.5 16.9 254 91-357 47-327 (432)
239 COG0738 FucP Fucose permease [ 97.9 0.00015 3.2E-09 63.6 11.4 126 77-208 267-392 (422)
240 PRK15403 multidrug efflux syst 97.9 0.00061 1.3E-08 62.2 16.2 122 74-196 246-372 (413)
241 PF06609 TRI12: Fungal trichot 97.9 4E-05 8.6E-10 71.8 7.6 149 83-231 350-560 (599)
242 KOG2533 Permease of the major 97.8 0.00025 5.3E-09 65.5 10.9 130 77-209 304-440 (495)
243 KOG2816 Predicted transporter 97.7 0.0008 1.7E-08 61.7 13.6 121 73-194 268-389 (463)
244 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00011 2.4E-09 49.1 5.9 48 75-122 28-75 (77)
245 PRK15462 dipeptide/tripeptide 97.7 0.0022 4.8E-08 59.4 15.6 134 84-217 310-469 (493)
246 KOG3574 Acetyl-CoA transporter 97.7 0.0014 3.1E-08 57.0 12.8 133 35-190 39-188 (510)
247 KOG2615 Permease of the major 97.7 0.00055 1.2E-08 59.6 10.3 123 74-196 289-413 (451)
248 PF02487 CLN3: CLN3 protein; 97.6 0.00093 2E-08 59.6 11.9 135 85-226 62-197 (402)
249 PF12832 MFS_1_like: MFS_1 lik 97.6 4.2E-05 9.2E-10 51.2 2.3 63 293-357 7-69 (77)
250 PTZ00207 hypothetical protein; 97.6 0.00053 1.2E-08 64.6 10.1 135 87-223 396-550 (591)
251 PF00854 PTR2: POT family; In 97.5 0.00056 1.2E-08 61.5 9.0 108 113-223 2-121 (372)
252 PF03219 TLC: TLC ATP/ADP tran 97.4 0.024 5.1E-07 52.5 18.4 117 80-196 56-205 (491)
253 KOG3810 Micronutrient transpor 97.4 0.00042 9.1E-09 59.4 6.0 157 78-236 37-194 (433)
254 KOG4332 Predicted sugar transp 97.3 0.0012 2.6E-08 54.7 7.5 90 74-164 64-154 (454)
255 PF03092 BT1: BT1 family; Int 97.3 0.0022 4.8E-08 58.8 10.0 151 78-228 251-416 (433)
256 KOG1237 H+/oligopeptide sympor 97.2 0.0061 1.3E-07 57.5 12.2 145 74-221 65-241 (571)
257 TIGR00939 2a57 Equilibrative N 97.0 0.0045 9.7E-08 56.6 9.5 135 90-229 53-200 (437)
258 KOG3098 Uncharacterized conser 97.0 0.055 1.2E-06 49.4 16.1 106 84-190 281-407 (461)
259 PF13000 Acatn: Acetyl-coenzym 97.0 0.0039 8.3E-08 56.5 8.3 118 78-195 33-178 (544)
260 COG3202 ATP/ADP translocase [E 96.9 0.26 5.7E-06 44.9 19.0 117 80-196 59-209 (509)
261 COG3104 PTR2 Dipeptide/tripept 96.9 0.032 6.8E-07 50.8 13.1 138 84-221 326-483 (498)
262 PRK03612 spermidine synthase; 96.8 0.07 1.5E-06 50.2 15.9 116 78-195 46-169 (521)
263 PF02487 CLN3: CLN3 protein; 96.7 0.024 5.3E-07 50.7 11.0 114 80-195 279-395 (402)
264 PF06963 FPN1: Ferroportin1 (F 96.4 0.16 3.4E-06 46.4 14.3 118 78-195 289-416 (432)
265 KOG3762 Predicted transporter 95.7 0.024 5.1E-07 52.0 5.8 58 75-132 39-97 (618)
266 KOG2563 Permease of the major 95.6 0.048 1E-06 49.0 7.3 150 78-228 297-453 (480)
267 KOG1479 Nucleoside transporter 95.3 0.88 1.9E-05 40.8 14.0 36 133-169 115-150 (406)
268 TIGR00805 oat sodium-independe 94.1 0.029 6.4E-07 54.2 2.2 68 291-360 38-105 (633)
269 KOG1330 Sugar transporter/spin 93.3 0.28 6.1E-06 44.5 6.6 118 79-196 280-411 (493)
270 PF01733 Nucleoside_tran: Nucl 93.2 0.025 5.4E-07 49.4 0.0 20 325-344 186-205 (309)
271 TIGR00939 2a57 Equilibrative N 93.1 1.5 3.2E-05 40.4 11.3 111 84-195 309-432 (437)
272 PF07672 MFS_Mycoplasma: Mycop 92.2 0.063 1.4E-06 44.7 1.0 57 167-224 2-61 (267)
273 KOG1479 Nucleoside transporter 92.1 2.9 6.3E-05 37.6 11.3 113 80-193 280-401 (406)
274 KOG3880 Predicted small molecu 90.3 1.3 2.8E-05 38.2 6.9 113 82-194 288-401 (409)
275 PF05631 DUF791: Protein of un 89.6 0.39 8.5E-06 42.2 3.5 43 312-356 60-102 (354)
276 KOG0637 Sucrose transporter an 89.3 0.22 4.8E-06 45.0 1.9 85 76-160 326-410 (498)
277 KOG2325 Predicted transporter/ 89.3 0.61 1.3E-05 43.0 4.7 79 136-217 388-467 (488)
278 PF01770 Folate_carrier: Reduc 88.1 10 0.00023 34.4 11.5 98 81-178 284-383 (412)
279 PF06779 DUF1228: Protein of u 87.8 0.14 3E-06 34.7 -0.3 53 304-358 10-62 (85)
280 KOG4332 Predicted sugar transp 87.2 12 0.00025 31.9 10.3 132 84-219 284-425 (454)
281 PF06813 Nodulin-like: Nodulin 86.5 0.72 1.6E-05 38.7 3.2 58 299-359 15-72 (250)
282 KOG3097 Predicted membrane pro 86.5 3.1 6.6E-05 36.3 6.8 72 92-164 68-139 (390)
283 TIGR00806 rfc RFC reduced fola 86.0 6.8 0.00015 36.4 9.2 94 85-178 301-396 (511)
284 COG5336 Uncharacterized protei 81.6 7.6 0.00017 27.4 5.8 33 86-118 46-79 (116)
285 PRK11469 hypothetical protein; 77.9 19 0.00042 28.8 8.1 33 96-128 149-181 (188)
286 PF11947 DUF3464: Protein of u 76.0 25 0.00055 26.9 7.8 80 104-186 56-145 (153)
287 KOG3880 Predicted small molecu 75.9 3.2 6.9E-05 35.9 3.3 133 85-223 65-197 (409)
288 PF01733 Nucleoside_tran: Nucl 74.8 1.2 2.5E-05 39.0 0.5 107 87-193 187-306 (309)
289 KOG2881 Predicted membrane pro 74.3 51 0.0011 27.7 9.9 19 340-359 258-276 (294)
290 KOG3810 Micronutrient transpor 73.8 16 0.00035 32.4 7.0 94 85-178 274-369 (433)
291 PF07672 MFS_Mycoplasma: Mycop 72.5 59 0.0013 27.6 9.8 105 84-189 143-257 (267)
292 KOG0055 Multidrug/pheromone ex 72.5 1.3E+02 0.0027 31.8 13.7 35 24-60 661-695 (1228)
293 TIGR00769 AAA ADP/ATP carrier 72.1 87 0.0019 29.3 15.0 72 142-216 273-345 (472)
294 PF13000 Acatn: Acetyl-coenzym 70.3 37 0.0008 31.8 8.8 47 138-184 408-454 (544)
295 PF02632 BioY: BioY family; I 66.6 44 0.00095 25.5 7.4 42 88-129 59-100 (148)
296 TIGR00880 2_A_01_02 Multidrug 65.9 31 0.00068 24.9 6.7 45 82-126 87-131 (141)
297 PF07760 DUF1616: Protein of u 63.5 95 0.0021 26.8 9.8 58 138-196 22-79 (287)
298 KOG1237 H+/oligopeptide sympor 62.6 23 0.0005 34.0 6.4 65 134-198 457-521 (571)
299 PF11299 DUF3100: Protein of u 60.0 12 0.00026 30.7 3.4 102 70-194 127-229 (241)
300 TIGR02840 spore_YtaF putative 57.3 78 0.0017 25.8 7.8 28 97-125 173-202 (206)
301 COG1268 BioY Uncharacterized c 57.3 78 0.0017 25.2 7.4 24 89-112 89-112 (184)
302 PF06912 DUF1275: Protein of u 55.1 1.1E+02 0.0024 24.7 14.4 18 88-105 52-69 (209)
303 PF07857 DUF1632: CEO family ( 51.3 1.2E+02 0.0026 25.7 8.0 24 202-225 113-136 (254)
304 KOG4830 Predicted sugar transp 50.5 18 0.0004 30.6 3.1 50 307-356 38-94 (412)
305 TIGR00926 2A1704 Peptide:H+ sy 49.5 87 0.0019 30.8 8.0 59 134-192 564-622 (654)
306 PRK10263 DNA translocase FtsK; 42.8 2.3E+02 0.0051 30.3 9.9 20 92-111 62-81 (1355)
307 PF03596 Cad: Cadmium resistan 41.0 1.2E+02 0.0026 24.4 6.3 35 80-114 124-167 (191)
308 PF02694 UPF0060: Uncharacteri 38.6 79 0.0017 22.5 4.3 51 82-132 54-104 (107)
309 COG4262 Predicted spermidine s 37.3 3.1E+02 0.0068 24.7 10.1 83 80-162 41-132 (508)
310 PF01528 Herpes_glycop: Herpes 36.2 2.1E+02 0.0045 25.8 7.6 74 132-207 231-305 (374)
311 PF00909 Ammonium_transp: Ammo 35.2 3.5E+02 0.0077 24.7 13.2 49 143-191 278-326 (399)
312 KOG2927 Membrane component of 34.8 31 0.00068 30.2 2.2 29 163-194 209-237 (372)
313 PRK02237 hypothetical protein; 34.1 1.3E+02 0.0029 21.4 4.8 51 82-132 56-106 (109)
314 PF09527 ATPase_gene1: Putativ 33.9 1.1E+02 0.0024 18.5 6.6 35 89-123 7-42 (55)
315 COG4769 Predicted membrane pro 33.5 1.4E+02 0.003 23.3 5.2 46 97-148 88-133 (181)
316 COG0477 ProP Permeases of the 32.9 31 0.00067 29.0 2.1 54 303-358 19-74 (338)
317 PF13493 DUF4118: Domain of un 32.9 92 0.002 21.8 4.2 24 89-112 82-105 (105)
318 PF03137 OATP: Organic Anion T 31.8 15 0.00033 34.9 0.0 63 295-359 12-74 (539)
319 PF04550 Phage_holin_2: Phage 31.4 1.6E+02 0.0035 20.1 4.6 41 125-165 21-61 (89)
320 PF11298 DUF3099: Protein of u 31.2 1.6E+02 0.0034 19.4 4.7 60 104-167 9-68 (73)
321 COG1971 Predicted membrane pro 29.1 3E+02 0.0066 22.1 8.2 36 93-128 148-183 (190)
322 TIGR00801 ncs2 uracil-xanthine 28.1 3.4E+02 0.0073 25.0 8.0 93 79-171 34-130 (415)
323 TIGR00836 amt ammonium transpo 28.0 4.8E+02 0.01 24.0 11.8 48 144-191 284-331 (403)
324 PF06645 SPC12: Microsomal sig 27.9 1.9E+02 0.004 19.2 5.1 20 90-109 15-34 (76)
325 PF10785 NADH-u_ox-rdase: NADH 27.3 2.1E+02 0.0045 19.5 5.5 42 94-135 30-78 (86)
326 PF13386 DsbD_2: Cytochrome C 27.1 3.3E+02 0.0072 21.8 9.7 28 317-344 146-173 (199)
327 PF11151 DUF2929: Protein of u 26.6 1.6E+02 0.0036 18.2 5.3 45 180-227 11-55 (57)
328 PF02990 EMP70: Endomembrane p 25.7 2.2E+02 0.0047 27.2 6.4 42 165-206 291-332 (521)
329 PF01405 PsbT: Photosystem II 25.7 97 0.0021 16.1 2.2 9 221-229 20-28 (29)
330 PRK10692 hypothetical protein; 25.5 2.2E+02 0.0048 19.3 4.6 17 111-127 3-19 (92)
331 TIGR03173 pbuX xanthine permea 25.2 3.2E+02 0.007 24.9 7.3 93 76-169 22-115 (406)
332 PRK03818 putative transporter; 25.2 6.2E+02 0.014 24.4 10.7 81 82-163 435-516 (552)
333 PRK04201 zinc transporter ZupT 24.8 4.3E+02 0.0094 22.4 12.6 13 105-117 174-186 (265)
334 PF10183 ESSS: ESSS subunit of 24.6 1.1E+02 0.0023 21.8 3.2 30 199-228 55-85 (105)
335 KOG3574 Acetyl-CoA transporter 24.4 3.7E+02 0.0079 24.8 6.9 48 139-186 373-420 (510)
336 PF06341 DUF1056: Protein of u 24.3 2E+02 0.0043 18.3 5.1 36 134-170 27-62 (63)
337 KOG3312 Predicted membrane pro 23.6 2.2E+02 0.0047 21.6 4.6 8 221-228 27-34 (186)
338 COG1288 Predicted membrane pro 23.6 3.3E+02 0.0071 25.2 6.6 23 199-221 214-236 (481)
339 PRK11875 psbT photosystem II r 23.5 1.3E+02 0.0028 15.9 2.5 9 221-229 20-28 (31)
340 COG4208 CysW ABC-type sulfate 23.0 1.7E+02 0.0036 24.5 4.3 39 152-190 83-121 (287)
341 TIGR02230 ATPase_gene1 F0F1-AT 22.8 2.8E+02 0.0061 19.6 6.3 33 91-123 51-84 (100)
342 PF03219 TLC: TLC ATP/ADP tran 22.8 6.6E+02 0.014 23.8 16.4 72 142-216 289-361 (491)
343 COG5547 Small integral membran 22.3 2.1E+02 0.0044 17.7 4.9 39 112-150 8-46 (62)
344 KOG3626 Organic anion transpor 22.0 88 0.0019 31.0 3.1 51 74-124 420-473 (735)
345 COG2233 UraA Xanthine/uracil p 21.9 6.6E+02 0.014 23.5 10.4 100 74-173 41-143 (451)
346 PF11833 DUF3353: Protein of u 21.7 4.3E+02 0.0094 21.3 7.0 27 169-195 139-165 (194)
347 PF00854 PTR2: POT family; In 21.7 3.1E+02 0.0068 24.5 6.5 102 77-181 249-370 (372)
348 CHL00031 psbT photosystem II p 21.2 1.5E+02 0.0032 16.0 2.4 9 221-229 20-28 (33)
349 PF04474 DUF554: Protein of un 21.0 3.5E+02 0.0077 22.4 5.9 57 90-146 10-66 (226)
350 PRK03612 spermidine synthase; 20.8 7.4E+02 0.016 23.6 12.6 31 82-112 54-84 (521)
351 PF02990 EMP70: Endomembrane p 20.5 1E+02 0.0022 29.3 3.2 27 275-302 251-277 (521)
352 COG2119 Predicted membrane pro 20.4 4.1E+02 0.0089 21.3 5.8 37 91-127 143-179 (190)
353 COG5336 Uncharacterized protei 20.4 3.4E+02 0.0073 19.5 5.4 40 167-206 38-78 (116)
354 PRK10720 uracil transporter; P 20.2 7E+02 0.015 23.1 8.5 7 222-228 403-409 (428)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-36 Score=268.29 Aligned_cols=329 Identities=27% Similarity=0.478 Sum_probs=274.4
Q ss_pred CCcchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCc----hhHHHHHHHHHH
Q 018042 18 NGKITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDS----QLLTSFTSSLYV 93 (361)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~ 93 (361)
+++++++....+..++++.+-.||..++.|.. ...+++++++...+....+ .+. ...+.+.+++.+
T Consensus 2 ~~~~t~~L~~~~~~~~~gsf~~Gy~~~~iNap---~~~i~~f~n~t~~~r~g~~-------~s~~~~~~lwS~~vs~f~i 71 (485)
T KOG0569|consen 2 KPKLTRRLLLAVIVATLGSFQFGYNIGVVNAP---QELIKSFINETLIERYGLP-------LSDSTLDLLWSLIVSIFFI 71 (485)
T ss_pred CCCccHHHHHHHHHHHHhchhhhhhheecCch---HHHHHHHHHHHHHHhcCCC-------CChHHHHHHHHHHHHHHHH
Confidence 45667788888888888899999999987665 5677777755543332111 222 235677899999
Q ss_pred HHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCccccc
Q 018042 94 AGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA---AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRG 170 (361)
Q Consensus 94 ~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~ 170 (361)
|.++|+++.+.++||+|||..+.++.++..++.++..+ .+++.+++++|++.|+..|......+.|+.|..|++.||
T Consensus 72 G~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG 151 (485)
T KOG0569|consen 72 GGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRG 151 (485)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhcc
Confidence 99999999999999999999999999988888877766 478899999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhcccC-CCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhh
Q 018042 171 AINNGFQFSIGIGALAANFINYGTEQIK-GGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVR 249 (361)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
....+.+.+..+|..++..++. .... +...|++.+.+..+++++..+...++||||+|+..++.+.+||++.++.++
T Consensus 152 ~~g~~~~~~~~~g~ll~~~~~l--~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~ 229 (485)
T KOG0569|consen 152 ALGTLLQIGVVIGILLGQVLGL--PSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYR 229 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc--HHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHh
Confidence 9999999999999999977753 3333 334799999999999999999999999999999985555999999999999
Q ss_pred CCcchHHHHHHHHHHHhhh---hhcccchhhhccc-CchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHH
Q 018042 250 GTNDVEAEFDDLLKASSTA---KTINHPFKKIIQR-KYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQ 325 (361)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 325 (361)
++++.+++.++..++.+++ ++++.++++++++ ..|++..+.+.+...+++++.+.+.+|...++++.|++..++.+
T Consensus 230 G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~ 309 (485)
T KOG0569|consen 230 GKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQY 309 (485)
T ss_pred CCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHH
Confidence 9987666555544333222 2256678899865 56777888889999999999999999999999999999999999
Q ss_pred HhhhhhhcccccccchhhHHHHhhhccceeecccC
Q 018042 326 LSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 360 (361)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~~ 360 (361)
.+...++..++..+++.+ +.||.|||++++.++
T Consensus 310 an~~~g~v~~~~t~~~~~--lid~~gRRpLll~~~ 342 (485)
T KOG0569|consen 310 ANLGIGIVNLLSTLVSPF--LIDRLGRRPLLLISL 342 (485)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHhcCCcHHHHHHH
Confidence 999999999999999999 699999999987653
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.1e-34 Score=266.84 Aligned_cols=324 Identities=19% Similarity=0.223 Sum_probs=230.3
Q ss_pred CCcchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHH
Q 018042 18 NGKITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLV 97 (361)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (361)
+.+..+.++..+.+++++.+.+|||.+..+.+... ...++. ..+.+.+..+.+++.+.+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~--~~~~~~-------------~~~~~~~~~~~~~~~~~~~ig~~i 71 (502)
T TIGR00887 7 TAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKM--LGYVYY-------------HGKGPLPSSVSAAVNGSASIGTLA 71 (502)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhc-------------cCcccchHHHHHHHHHHHHHHHHH
Confidence 35566778888888999999999999988776321 111110 112345667789999999999999
Q ss_pred HHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhh------HHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccc
Q 018042 98 ASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN------VYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGA 171 (361)
Q Consensus 98 ~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~ 171 (361)
++++.|+++||+|||+++.+++++..++.++++++++ ++.++++|++.|++.|...+..+.+++|++|+++|++
T Consensus 72 g~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~ 151 (502)
T TIGR00887 72 GQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGA 151 (502)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHH
Confidence 9999999999999999999999999999998888765 7889999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhccc--------------------CCCcchHHHHHhhHHHHHHHHHhcccccCChhHH
Q 018042 172 INNGFQFSIGIGALAANFINYGTEQI--------------------KGGWGWRVSLALAAVPASILTLGALFLPETPNSL 231 (361)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~--------------------~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~ 231 (361)
++++.+....+|.++++.++..+... ..+++||+.+.+.+++.++..+..+++||||+|+
T Consensus 152 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l 231 (502)
T TIGR00887 152 MMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYT 231 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999888887654321 0124799999998888887777778899999999
Q ss_pred HhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchh---HHHHHHHHHHHHHhcchhhhHHc
Q 018042 232 IQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRP---QLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
..++++++++++...+..+.+..+ +.++.++..++++..+.+++++++++.++ +..+.....++.+...++....|
T Consensus 232 ~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 310 (502)
T TIGR00887 232 ADVAKDVEQAASDMSAVLQVKIEA-EPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLN 310 (502)
T ss_pred HHhCcchHHHHHHHHHHhcccccc-CcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 988875555665555554322111 01111111011111123567776532211 22232233333333344567778
Q ss_pred HHHHHHhcCCCChhhHH------------HhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 309 APLLFRTIGLGRLKVCQ------------LSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 309 ~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.|.++++.|++...++. ...+..++.+++.++.++ ++||+|||++++.+
T Consensus 311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--l~dr~gRR~~l~~~ 371 (502)
T TIGR00887 311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVF--LVDIIGRKPIQLMG 371 (502)
T ss_pred cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhhcchhHHHHH
Confidence 89999888887553221 223344566678888888 69999999987654
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2e-32 Score=254.14 Aligned_cols=320 Identities=23% Similarity=0.384 Sum_probs=237.0
Q ss_pred chHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHH
Q 018042 21 ITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASF 100 (361)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (361)
..+.....+.+++++.+.++||.+.+++. .+.+.+.+ .+....+++.+..+.+++.+++.++..++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~ 73 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGT--VESLNTVF----------VAPQNLSESAANSLLGFCVASALIGCIIGGA 73 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHh--HHHHHHHh----------cccccccccCChhHHHHHHHHHHHHHHHHHH
Confidence 34456667777778899999999998776 24444444 2334566789999999999999999999999
Q ss_pred hhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh------------hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCccc
Q 018042 101 VASSVTRAFGRKPSVLMGGAAFLAGSALGGAA------------VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARY 168 (361)
Q Consensus 101 ~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~ 168 (361)
+.|+++||+|||++++.+.++..++.+.++++ +++..++++|++.|++.|...+...++++|++|+++
T Consensus 74 ~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~ 153 (479)
T PRK10077 74 LGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI 153 (479)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh
Confidence 99999999999999999999999888877753 235678899999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhcc-----cCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHH
Q 018042 169 RGAINNGFQFSIGIGALAANFINYGTEQ-----IKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKL 243 (361)
Q Consensus 169 R~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~ 243 (361)
|++++++.+.+..+|.++++.++..+.. ..+..+||+.|++.+++.++..+..+++||+|+++..+++ .+++++
T Consensus 154 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~-~~~~~~ 232 (479)
T PRK10077 154 RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGK-QEQAEG 232 (479)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCC-HHHHHH
Confidence 9999999999999999998887665532 2234689999999888887776666779999998877665 666665
Q ss_pred HHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhh
Q 018042 244 MLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKV 323 (361)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 323 (361)
..++..+.++.+...++..+....++ ...+..+. ..............+.+..+.+...++.|.+.++.|.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~ 308 (479)
T PRK10077 233 ILRKIMGNTLATQALQEIKHSLDHGR---KTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIA 308 (479)
T ss_pred HHHHHcCChhHHHHHHHHHHHHHHhh---hhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchH
Confidence 55555544333222222221111111 01111111 111122222333445555666777888899988889988877
Q ss_pred HHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 324 CQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 324 ~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
........+..+++.++.++ ++||+|||++++.+
T Consensus 309 ~~~~~~~~~~~~i~~~~~g~--l~dr~g~r~~~i~~ 342 (479)
T PRK10077 309 LLQTIIVGVINLTFTVLAIM--TVDKFGRKPLQIIG 342 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHhcChHHHHHh
Confidence 77777788888999999999 69999999887654
No 4
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.4e-33 Score=264.43 Aligned_cols=272 Identities=18% Similarity=0.227 Sum_probs=214.7
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHh
Q 018042 22 TAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFV 101 (361)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (361)
.++.|.+.++++++.+.++++....+.+ .|.+.+++|++..+.+++.+++.++.++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~i--------------------lp~i~~~~gls~~~~g~l~s~~~lG~iiG~li 221 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFV--------------------LPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFF 221 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888888888889999988876665 55567778999999999999999999999999
Q ss_pred hHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHH
Q 018042 102 ASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIG 181 (361)
Q Consensus 102 ~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~ 181 (361)
+|+++||+|||+++++++++.+++.++++++++++.++++|++.|++.+...+....++.|++|+++|++.+++...+..
T Consensus 222 ~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~ 301 (742)
T TIGR01299 222 WGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWM 301 (742)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccC----------CCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCC
Q 018042 182 IGALAANFINYGTEQIK----------GGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGT 251 (361)
Q Consensus 182 ~g~~~~~~~~~~~~~~~----------~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
+|.++++.++..+.... ...+||+.+++.+++.++.++..+++||||+|+..+++ .+++.+.+++++..
T Consensus 302 iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr-~~eA~~iL~~i~~~ 380 (742)
T TIGR01299 302 IGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGK-HDEAWMILKLIHDT 380 (742)
T ss_pred HHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCC-HHHHHHHHHHHhcC
Confidence 99999888765543211 12479999999888887777777889999999999888 88888888888765
Q ss_pred cch-----HHHH--HHHHHHHhh------hhhc------------------ccchhhhcccCchhHHHHHHHHHHHHHhc
Q 018042 252 NDV-----EAEF--DDLLKASST------AKTI------------------NHPFKKIIQRKYRPQLLMAMAIPFFQQVT 300 (361)
Q Consensus 252 ~~~-----~~~~--~~~~~~~~~------~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (361)
+.. .... +..+...+. ++.. ..+++++++.+.++++++...+ +++...
T Consensus 381 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~-wf~~~~ 459 (742)
T TIGR01299 381 NMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGV-WFTLSF 459 (742)
T ss_pred CCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHH-HHHHHH
Confidence 421 1110 111110000 0000 0135566767676666665544 566667
Q ss_pred chhhhHHcHHHHHHh
Q 018042 301 GINVIAFYAPLLFRT 315 (361)
Q Consensus 301 ~~~~~~~~~~~~~~~ 315 (361)
+++++..|+|.++++
T Consensus 460 ~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 460 GYYGLSVWFPDMIKH 474 (742)
T ss_pred HHHHHHHHHHHHHHH
Confidence 889999999987643
No 5
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.5e-32 Score=254.16 Aligned_cols=322 Identities=35% Similarity=0.574 Sum_probs=256.2
Q ss_pred cchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCc--hhHHHHHHHHHHHHHH
Q 018042 20 KITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDS--QLLTSFTSSLYVAGLV 97 (361)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~ 97 (361)
.........+....++.+..|++ +..+....+...+......... ..+. ++.+++.+...++..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~fg~~-g~~g~~s~~~~~~~~~~~~~~~------------~~~~~~~~~s~~~s~~~lga~~ 104 (513)
T KOG0254|consen 38 MISPFVILLALVAALGGLLFGYD-GDIGGISGALDFLQRFASLYDL------------STGEYSVRQGLLTSILNLGALV 104 (513)
T ss_pred cCceehHHHHHHHHHHHHHhCcc-cccccchhhHHHHHhccccccc------------ccchhHHHHHHHHHHHHHHHHH
Confidence 34456677788888888999998 4333333333444333221111 1111 5669999999999999
Q ss_pred HHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHH
Q 018042 98 ASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQ 177 (361)
Q Consensus 98 ~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~ 177 (361)
++++.|+++|++|||+.++++.+++.++.+++++++|+++++++|++.|+|.|....+.+.|++|..|++.||...+..+
T Consensus 105 g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~ 184 (513)
T KOG0254|consen 105 GSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQ 184 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhC--CcchH
Q 018042 178 FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRG--TNDVE 255 (361)
Q Consensus 178 ~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 255 (361)
....+|..++..++....+. . .+||..+.+..+++++..+..+++||+|+|+.++++ .++++....++++ +.+.+
T Consensus 185 l~~~~Gi~~~~~~~~~~~~~-~-~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~-~~~a~~~l~~l~g~~~~~~~ 261 (513)
T KOG0254|consen 185 LFITIGILLGYCINYGTSKV-Y-AGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGR-LEEAKRSLKRLRGLSPEDVE 261 (513)
T ss_pred HHHHHHHHHHHHHhhhhccC-C-ccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCC-hHHHHHHHHHHhCCCCcchH
Confidence 99999999997777766544 2 589999999999999888887789999999999888 8889999888888 44555
Q ss_pred HHHHHHHHHHhhh--hhc-ccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhh
Q 018042 256 AEFDDLLKASSTA--KTI-NHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIEC 332 (361)
Q Consensus 256 ~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 332 (361)
.+.++.+.....+ ... +..+++++++..+++..+...+..++++++.+...+|.+.+++..|.+... ........+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~ 340 (513)
T KOG0254|consen 262 VELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGV 340 (513)
T ss_pred HHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHH
Confidence 5555444211111 111 224666776667788888999999999999999999999999998887654 455555666
Q ss_pred cccccccchhhHHHHhhhccceeecccC
Q 018042 333 GGSIGFGRNMWVKWMNRVRWRKLDIYTL 360 (361)
Q Consensus 333 ~~~~g~~~~~~~~l~dr~grr~~~~~~~ 360 (361)
..+++.+++.. +.||+|||++++.+.
T Consensus 341 v~~~~t~~~~~--lvd~~gRr~lll~s~ 366 (513)
T KOG0254|consen 341 VNFLGTLVATY--LVDRFGRRKLLLFGA 366 (513)
T ss_pred HHHHHHHHHHH--HHHHhccHHHHHHhH
Confidence 67777777777 699999999987664
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6.9e-31 Score=243.54 Aligned_cols=326 Identities=33% Similarity=0.561 Sum_probs=232.5
Q ss_pred CcchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHH
Q 018042 19 GKITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVA 98 (361)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (361)
.+..++.+..+.++.++.+..+++....+..........++ +...+-+.+..+.+++.+++.++..++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~ 87 (481)
T TIGR00879 20 GSTYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKF------------TSANSDSYSSSLWGLVVSIFLVGGFIG 87 (481)
T ss_pred CcccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhc------------CCcccCCCChhHHHHHHHHHHHHHHHH
Confidence 34456666677777778888899888877663221111111 001112356899999999999999999
Q ss_pred HHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhH
Q 018042 99 SFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA---VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNG 175 (361)
Q Consensus 99 ~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~ 175 (361)
+++.|+++||+|||++++.+.++..++.+++.+. .+++.++++|++.|++.+...+....+++|++|+++|++++++
T Consensus 88 ~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 167 (481)
T TIGR00879 88 ALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSL 167 (481)
T ss_pred HHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhH
Confidence 9999999999999999999999999999988554 3455899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchH
Q 018042 176 FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVE 255 (361)
Q Consensus 176 ~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (361)
.+.+..+|..+++.++.......+..+||+.|++.++..++..+..+++||+|++...+++ .+++++...+....++.+
T Consensus 168 ~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 246 (481)
T TIGR00879 168 YQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGR-VEEARKSLARLRGTSGED 246 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCC-hHHHHHHHHHHhCCCCCc
Confidence 9999999999999997111222234589999999777766666666779999987766555 444444333332222111
Q ss_pred HH-H---HHHHHHHh-hhhhcccchhhhcccC--chhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhh
Q 018042 256 AE-F---DDLLKASS-TAKTINHPFKKIIQRK--YRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSK 328 (361)
Q Consensus 256 ~~-~---~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 328 (361)
.+ . +......+ +.+..+..+++.++.. .+++.++...+.++........+.++.|.++++.|++..+++....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 326 (481)
T TIGR00879 247 KELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSI 326 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHH
Confidence 11 0 11011111 1111122234444321 2355555566666666666677888999999889999988888888
Q ss_pred hhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 329 WIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 329 ~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
...++.+++.++.++ ++||++||+.+..+
T Consensus 327 ~~~~~~~~~~~~~g~--l~d~~~~~~~~~~~ 355 (481)
T TIGR00879 327 IVGAVNFAFTFVAIF--LVDRFGRRPLLLIG 355 (481)
T ss_pred HHHHHHHHHHHHHHH--HHHHhcchHHHHHH
Confidence 889999999999999 69999999876544
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.2e-32 Score=232.82 Aligned_cols=297 Identities=15% Similarity=0.109 Sum_probs=236.8
Q ss_pred CcchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHH
Q 018042 19 GKITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVA 98 (361)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (361)
+..++.++.+.+...++.....+..-.++.+ .|.+.++.++|.+|.|.+.+.+.+.+.++
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a--------------------~p~l~e~~~lsk~~lG~i~s~f~i~YG~s 80 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLA--------------------MPALIEDGGLSKTQLGILGSAFSITYGVS 80 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc--------------------cHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 3445566777777777777777777777666 78888999999999999999999999999
Q ss_pred HHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHH
Q 018042 99 SFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQF 178 (361)
Q Consensus 99 ~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~ 178 (361)
.++.|.++||.+.|+.+..++++.++.+++++++++.+.+.++.+++|..+|...|++...++.|+++++||+..++++.
T Consensus 81 Kf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~ 160 (448)
T COG2271 81 KFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNT 160 (448)
T ss_pred HHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHH
Q 018042 179 SIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAE 257 (361)
Q Consensus 179 ~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (361)
+.++|..+.+++..+ .....+.+||..|++.++++++..+..++ .+|+|+..-. +..++.+++.
T Consensus 161 shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL---------P~ie~~~~d~----- 225 (448)
T COG2271 161 SHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL---------PPIEEYRGDP----- 225 (448)
T ss_pred hhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCC---------CCHHHhhcCc-----
Confidence 999999998888622 22333458999999999999888777655 8888853211 1111111110
Q ss_pred HHHHHHHHhhhhhcccchhhhc-ccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhhHHHhhhhhhccc
Q 018042 258 FDDLLKASSTAKTINHPFKKII-QRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGS 335 (361)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~ 335 (361)
.+. ..++++.+.-+.++++ +...+++.++.+++..+.....-+.+..|.|.|+.+ .|+|..++......+-.+++
T Consensus 226 -~e~--~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl 302 (448)
T COG2271 226 -LEI--YEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGL 302 (448)
T ss_pred -hhh--hhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhh
Confidence 000 0011111112333333 455556777788888888888889999999999954 59999999999999999999
Q ss_pred ccccchhhHHHHhhh--cccee
Q 018042 336 IGFGRNMWVKWMNRV--RWRKL 355 (361)
Q Consensus 336 ~g~~~~~~~~l~dr~--grr~~ 355 (361)
+|.++.|| ++||+ |||..
T Consensus 303 ~G~Ll~Gw--lSDklfkgrR~p 322 (448)
T COG2271 303 PGTLLAGW--LSDKLFKGRRGP 322 (448)
T ss_pred HHHHHHHH--HHHHhcccccch
Confidence 99999999 69997 67754
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.98 E-value=3.6e-31 Score=240.12 Aligned_cols=299 Identities=14% Similarity=0.156 Sum_probs=221.3
Q ss_pred HHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHH
Q 018042 25 VILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASS 104 (361)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (361)
+|....+++++.+++++|....+.. .|.+++|+|++.++.+++.+++.+++.+++++.|+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~--------------------~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~ 65 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFA--------------------GLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNI 65 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHH--------------------HHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3455666666777888888887766 56778999999999999999999999999999999
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHH
Q 018042 105 VTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGA 184 (361)
Q Consensus 105 l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~ 184 (361)
++||+|||+++..++++..++++++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.
T Consensus 66 l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 145 (412)
T TIGR02332 66 MLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTM 145 (412)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccc---CCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCc-chHHHHH
Q 018042 185 LAANFINYGTEQI---KGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTN-DVEAEFD 259 (361)
Q Consensus 185 ~~~~~~~~~~~~~---~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 259 (361)
+++++++..+... .+..+||+.|++.+++.++..+.. +++||+|+.. +..++++++...+..+.+. +.+++.+
T Consensus 146 ~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 223 (412)
T TIGR02332 146 ALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEEDKKALKEMIDNDQLTLEQPEG 223 (412)
T ss_pred HHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHHHHHHHHHHHhcccccccccc
Confidence 9999997766532 234589999999888877665544 5689988521 0011111111111111100 0000000
Q ss_pred HHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhc--CCCChhhHHHhhhhhhccccc
Q 018042 260 DLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTI--GLGRLKVCQLSKWIECGGSIG 337 (361)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~g 337 (361)
+. .++....+..+++++ . +.++...+.+++.....+.+..|.|.++++. |++..+++.+.....++.++|
T Consensus 224 ~~---~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g 295 (412)
T TIGR02332 224 AF---AHAAMPQRSMLREIF----T-PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFG 295 (412)
T ss_pred cc---ccccccHHHHHHHhc----C-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHH
Confidence 00 000000011122222 1 2234445555556666778889999999874 677888888899999999999
Q ss_pred ccchhhHHHHhhhcccee
Q 018042 338 FGRNMWVKWMNRVRWRKL 355 (361)
Q Consensus 338 ~~~~~~~~l~dr~grr~~ 355 (361)
.++.++ ++||++||+.
T Consensus 296 ~l~~g~--l~dr~~~r~~ 311 (412)
T TIGR02332 296 MIWWSR--HSDRLKERKH 311 (412)
T ss_pred HHHHHH--HhcccCccHH
Confidence 999999 6999997764
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=6.8e-31 Score=243.65 Aligned_cols=286 Identities=16% Similarity=0.160 Sum_probs=204.2
Q ss_pred HHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCc----hhHHH--HHHHHHHHHHHHHHh
Q 018042 28 SCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDS----QLLTS--FTSSLYVAGLVASFV 101 (361)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~ 101 (361)
....++++.++++||..+++.. .|.+.++++.+. +..+. ..++.+++..+++++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~--------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~ 76 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFV--------------------AYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLF 76 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556667889999999987766 222333333222 11222 247788999999999
Q ss_pred hHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHH--------HHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchh
Q 018042 102 ASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYM--------LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAIN 173 (361)
Q Consensus 102 ~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~ 173 (361)
.|+++||+|||+++.+++++++++++++++++|++. ++++|+++|++.|..++....+++|++|+++|++..
T Consensus 77 ~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~ 156 (490)
T PRK10642 77 FGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMG 156 (490)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHH
Confidence 999999999999999999999999999999999875 788999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccc-----CCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHh
Q 018042 174 NGFQFSIGIGALAANFINYGTEQI-----KGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRV 248 (361)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~ 248 (361)
++...+..+|.++++.+...+... ..++|||+.|++.+++.++..+....+||+|++...+++ .++..
T Consensus 157 ~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~-~~~~~------ 229 (490)
T PRK10642 157 SWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDK-LEQGD------ 229 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHh-hhhhc------
Confidence 999988888888887665443321 124699999999877666555555668999986532211 00000
Q ss_pred hCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHh
Q 018042 249 RGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLS 327 (361)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~ 327 (361)
. +...++.+.++++++++ .++...... ...+.....++.+..|.|.+++ ..|++........
T Consensus 230 -~--------------~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~ 292 (490)
T PRK10642 230 -R--------------EGLQDGPKVSFKEIATK-HWRSLLTCI-GLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLII 292 (490)
T ss_pred -c--------------ccccccccCCHHHHHHH-hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 0 00000112345555543 222333222 2223333455677889999985 4598888877777
Q ss_pred hhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 328 KWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
....++.+++.++.++ ++||+|||+.+..+
T Consensus 293 ~~~~~~~~~~~~~~g~--l~dr~grr~~~~~~ 322 (490)
T PRK10642 293 IAIMIGMLFVQPVMGL--LSDRFGRRPFVILG 322 (490)
T ss_pred HHHHHHHHHHHHHHHH--HHHHhccHHHHHHH
Confidence 7788888899999999 69999999876543
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.1e-30 Score=226.29 Aligned_cols=267 Identities=16% Similarity=0.167 Sum_probs=212.3
Q ss_pred HHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHH
Q 018042 26 ILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSV 105 (361)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 105 (361)
+...+..+++.|..+.+-.+.... .|++.+|+|+|..+.|++.+.|.++..++.++...+
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gL--------------------Lp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~l 71 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGL--------------------LPPIAADLGVSEGAAGQLITAYALGVALGAPLLALL 71 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhc--------------------hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556667777777666555 788899999999999999999999999999999999
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHH
Q 018042 106 TRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGAL 185 (361)
Q Consensus 106 ~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~ 185 (361)
+||+.||++++..+.++.++++++++++|++.++++|++.|+..|..++....+..+..|+++|++++++...+..++.+
T Consensus 72 t~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v 151 (394)
T COG2814 72 TGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATV 151 (394)
T ss_pred HcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 018042 186 AANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKA 264 (361)
Q Consensus 186 ~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (361)
+|.+++.++.+.. |||+.|+..+.++++..+..+ .+| |+....++.
T Consensus 152 ~GvPLGt~ig~~~---GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~---------------------------- 198 (394)
T COG2814 152 LGVPLGTFLGQLF---GWRATFLAIAVLALLALLLLWKLLP--PSEISGSLP---------------------------- 198 (394)
T ss_pred HhccHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCC----------------------------
Confidence 9999999998765 799999999999888877664 477 211000000
Q ss_pred HhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHH-HhcCCCChhhHHHhhhhhhcccccccchhh
Q 018042 265 SSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMW 343 (361)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~ 343 (361)
.+.++..+.++++ +.+.......+ .+.+.+....|...++ +..|+|.+...+....+++++++|..++|+
T Consensus 199 -----~~~~~~~~~l~~p---~v~~~l~~t~l-~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGr 269 (394)
T COG2814 199 -----GPLRTLLRLLRRP---GVLLGLLATFL-FMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGR 269 (394)
T ss_pred -----cchhHHHHHhcCc---hHHHHHHHHHH-HHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 0011123333443 33333333333 3344444444544455 556999999999999999999999999999
Q ss_pred HHHHhhhccceeec
Q 018042 344 VKWMNRVRWRKLDI 357 (361)
Q Consensus 344 ~~l~dr~grr~~~~ 357 (361)
+.|| +.|+.+.
T Consensus 270 --l~dr-~~~~~l~ 280 (394)
T COG2814 270 --LADR-GPRRALI 280 (394)
T ss_pred --hccc-cchhHHH
Confidence 6999 6665543
No 11
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=5.2e-30 Score=234.31 Aligned_cols=281 Identities=17% Similarity=0.142 Sum_probs=198.1
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHH---HHHHHHHHHHHHH
Q 018042 22 TAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLT---SFTSSLYVAGLVA 98 (361)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~ 98 (361)
+++++.....++++.+++++|...++.. .+...+++.|. +.+..+.+ ...+...++..++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~l~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ig 79 (432)
T PRK10406 17 TRRRIWAIVGASSGNLVEWFDFYVYSFC--SLYFAHIFFPS---------------GNTTTQLLQTAGVFAAGFLMRPIG 79 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCC---------------CCchHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666677889999999887665 22223332211 23334333 3344555566699
Q ss_pred HHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhcCCccccc
Q 018042 99 SFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVY--------MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRG 170 (361)
Q Consensus 99 ~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~ 170 (361)
+++.|+++||+|||+++..+.+++.++++++++++++. .++++|+++|++.|..++...++++|++|+++|+
T Consensus 80 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg 159 (432)
T PRK10406 80 GWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKG 159 (432)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCccc
Confidence 99999999999999999999999999999999988764 5888999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhcccC-----CCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHH
Q 018042 171 AINNGFQFSIGIGALAANFINYGTEQIK-----GGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLML 245 (361)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~ 245 (361)
++.++.+.+...|.++++.+...+.... ...|||+.|++.+++.++........||+|++..+ +
T Consensus 160 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~---------~-- 228 (432)
T PRK10406 160 FYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR---------A-- 228 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh---------h--
Confidence 9999988888888888777655444321 24699999999888777665554557887642100 0
Q ss_pred HHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhhH
Q 018042 246 QRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVC 324 (361)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~ 324 (361)
. +++.+++++++++ +.+.......+.....++.+..|.|.++++ .|++..+.+
T Consensus 229 --------------------~---~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~ 282 (432)
T PRK10406 229 --------------------L---KEAGSLKGLWRNR---RAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVAS 282 (432)
T ss_pred --------------------h---cccccHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 0 0012355555432 222222222222233456677889998854 699988888
Q ss_pred HHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 325 QLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 325 ~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.......++..++..+.|+ ++||++||+++..
T Consensus 283 ~~~~i~~~~~~i~~~~~G~--l~Dr~grr~~~~~ 314 (432)
T PRK10406 283 GIMTAALFVFMLIQPLIGA--LSDKIGRRTSMLC 314 (432)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHcCchHHHHH
Confidence 8777777777788888888 6999999986543
No 12
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=1.2e-35 Score=273.45 Aligned_cols=316 Identities=30% Similarity=0.588 Sum_probs=244.7
Q ss_pred HHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 018042 31 MAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG 110 (361)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G 110 (361)
+.+++.+.+|||....+.......+...+..+..+ .+.+.++.+.++..+...+|..+|+++.|+++||+|
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~G 74 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSE---------SSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYG 74 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhhcccccccc---------ccccchHHHHHHHHHHHHhhhccccccccccccccc
Confidence 34556689999998887664433322222211111 111114567889999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHH
Q 018042 111 RKPSVLMGGAAFLAGSALGGAAV---NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAA 187 (361)
Q Consensus 111 rr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~ 187 (361)
||+.++++.++..++.++.++++ +++.+.++|++.|++.|...+....++.|..|+++|++..++.+.+..+|.+++
T Consensus 75 Rk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~ 154 (451)
T PF00083_consen 75 RKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLA 154 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999 999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhh
Q 018042 188 NFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASST 267 (361)
Q Consensus 188 ~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (361)
..++.......++.+||+.+++.++++++..+..+++||||+|+..+++ .||+++..+++++++..+++.++..++.++
T Consensus 155 ~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~-~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
T PF00083_consen 155 SLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR-DEEAEKVLRKLRGKEIEDEEIEEIKAEKKE 233 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccceeccccc-cccccccccccccccccccccccccccccc
Confidence 8887666544444679999999999988887777889999999998888 778888888876665444444433333333
Q ss_pred hhhcccchhhhcccCc-hhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHH
Q 018042 268 AKTINHPFKKIIQRKY-RPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKW 346 (361)
Q Consensus 268 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l 346 (361)
.++.+..++++++++. +++......+..+.+..+.+...+|.+.++++.|.+.. ........+..+++.+++.+ +
T Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~ 309 (451)
T PF00083_consen 234 SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIF--L 309 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccc--c
Confidence 3233356777776543 56666667777777777777888888988888777777 33445556667777777777 6
Q ss_pred HhhhccceeecccC
Q 018042 347 MNRVRWRKLDIYTL 360 (361)
Q Consensus 347 ~dr~grr~~~~~~~ 360 (361)
.||+|||++++.+.
T Consensus 310 ~~~~GRr~~~i~~~ 323 (451)
T PF00083_consen 310 IDRFGRRKLLIIGL 323 (451)
T ss_pred cccccccccccccc
Confidence 99999999887664
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=2.1e-29 Score=228.78 Aligned_cols=304 Identities=15% Similarity=0.174 Sum_probs=217.5
Q ss_pred chHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHH
Q 018042 21 ITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASF 100 (361)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (361)
.++++|.....+.++.+.++++....+.+ .|.+++++|++..+.+++.+.+.++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~ 65 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALV--------------------LAEVAGEFGLTTVDAASLISAALISRWFGAL 65 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHhCCChhhHHHHHHHHHHHHHHHHH
Confidence 34566666777778888888888877666 5566788899999999999999999999999
Q ss_pred hhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHH
Q 018042 101 VASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSI 180 (361)
Q Consensus 101 ~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~ 180 (361)
+.|+++||+|||++++.+.++.++++++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+.
T Consensus 66 ~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 145 (405)
T TIGR00891 66 MFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGY 145 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHH
Q 018042 181 GIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDD 260 (361)
Q Consensus 181 ~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (361)
.+|.++++.++..+....+ .+||+.|++.++..++..+.....||++++..++++ +++.++..++..+.++.
T Consensus 146 ~~g~~~~~~l~~~l~~~~~-~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 217 (405)
T TIGR00891 146 AVGAVVAAQVYSLVVPVWG-DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAG-KALVRTMVDILYGGEHR------ 217 (405)
T ss_pred HHHHHHHHHHHHHHHHhcC-ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhh-hhhhhhHHHHHhccchh------
Confidence 9999999998776654322 259999988776666555555668888754322211 11111111111100000
Q ss_pred HHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhccccccc
Q 018042 261 LLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFG 339 (361)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~ 339 (361)
.+ +..++.....++. ...+++.+...................+.|.++. +.|++..+.+.+.....++.+++.+
T Consensus 218 ~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~ 292 (405)
T TIGR00891 218 IA---NIVMTLAAAMVQS--AGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGC 292 (405)
T ss_pred hh---hhhhhhhHHhhhh--hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000011111 1111221221222222212222345566777774 5699999999999999999999999
Q ss_pred chhhHHHHhhhccceeeccc
Q 018042 340 RNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 340 ~~~~~~l~dr~grr~~~~~~ 359 (361)
+.++ +.||+|||+.+..+
T Consensus 293 ~~g~--l~dr~g~~~~~~~~ 310 (405)
T TIGR00891 293 VFGF--LGDWLGRRKAYVCS 310 (405)
T ss_pred HHHH--HHHHhCchhhhHHH
Confidence 9999 69999999876543
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=2.4e-29 Score=229.96 Aligned_cols=288 Identities=18% Similarity=0.197 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhH
Q 018042 24 FVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVAS 103 (361)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 103 (361)
+++.....+.++.+.++++....++. .|.+++++|+++.+.++..+.+.++..+++++.|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g 74 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYI--------------------MYLIKADLGLTDMEGAFLATAAFIGRPFGGALFG 74 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHH--------------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556667777888888765554 5566788899999999999999999999999999
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHH
Q 018042 104 SVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIG 183 (361)
Q Consensus 104 ~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g 183 (361)
+++||+|||+++..+.++..+++++.+++++++.++++|++.|++.+..++....++.|++|+|+|+++.++...+..+|
T Consensus 75 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 154 (426)
T PRK12307 75 LLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIG 154 (426)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHH
Q 018042 184 ALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLK 263 (361)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (361)
.++++.+...+. +..+||+.|++..+..++........||++++..++.+ .+++.
T Consensus 155 ~~~~~~l~~~l~---~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~-------------~~~~~--------- 209 (426)
T PRK12307 155 NIIAAYFMPSFA---EAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS-------------GKGKH--------- 209 (426)
T ss_pred HHHHHHHHHHHc---ccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh-------------ccccc---------
Confidence 999988865554 33589999988655443333222335666533211100 00000
Q ss_pred HHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhh
Q 018042 264 ASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMW 343 (361)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~ 343 (361)
..+..+..+.++++.++++..+....... ..+........+..+.|.++++.|.+....+.......++.+++.++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~ 288 (426)
T PRK12307 210 SQSAWSVFSLSMKGLFNRAQFPLTLCVFI-VLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGL 288 (426)
T ss_pred cccchhhhhHHHHHHHhhchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011224556665544333332222 22222333344667889898888999888888888889999999999999
Q ss_pred HHHHhhhccceeeccc
Q 018042 344 VKWMNRVRWRKLDIYT 359 (361)
Q Consensus 344 ~~l~dr~grr~~~~~~ 359 (361)
+.||++||+.+..+
T Consensus 289 --l~dr~~~~~~~~~~ 302 (426)
T PRK12307 289 --CADRIGLKKTFSIG 302 (426)
T ss_pred --HHHHhccHHHHHHH
Confidence 69999999876544
No 15
>TIGR00898 2A0119 cation transport protein.
Probab=99.96 E-value=2.4e-29 Score=234.89 Aligned_cols=274 Identities=18% Similarity=0.208 Sum_probs=204.7
Q ss_pred cccccccccCC---chhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018042 70 DTKISNYCKFD---SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLG 146 (361)
Q Consensus 70 ~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 146 (361)
.|.+.+|+|++ ..+.++..+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+++.|++.|
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G 191 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVG 191 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 56789999999 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 226 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 226 (361)
++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+. +||+.+++.+++.++..+..+++||
T Consensus 192 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~------~wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 192 MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP------DWRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred hhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999877654 4999999998888877777778999
Q ss_pred ChhHHHhhCCCHHHHHHHHHHhhCCcchH--HHHHHHH-HHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchh
Q 018042 227 TPNSLIQRKSDHQKAKLMLQRVRGTNDVE--AEFDDLL-KASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGIN 303 (361)
Q Consensus 227 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (361)
+|+|+..+++ .+++.+..++..+.++.. .+..+.. ++...+++.+.+++++++++..+...+.....++.....++
T Consensus 266 sp~~l~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (505)
T TIGR00898 266 SPRWLISQGR-IEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYY 344 (505)
T ss_pred ChHHHHHCCC-HHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988887 666666665554333211 1111111 11111111234677777665544444433333333222222
Q ss_pred hhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 304 VIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 304 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
..+.+....+.+. ........+..+++.++.++ +.||+|||+.+.++
T Consensus 345 ----~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~--l~dr~grr~~~~~~ 391 (505)
T TIGR00898 345 ----GLVLDLGNLGGNI---YLDLFISGLVELPAKLITLL--LIDRLGRRYTMAAS 391 (505)
T ss_pred ----HHhccccccCCCh---HHHHHHHHHHHHHHHHHHHH--HHHHhCCHHHHHHH
Confidence 2222233344442 23334456667788888888 69999999876654
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=8.2e-30 Score=235.23 Aligned_cols=297 Identities=11% Similarity=0.014 Sum_probs=211.9
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHh
Q 018042 22 TAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFV 101 (361)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (361)
.+..+.+..++.++.+....+...++.. .|.+.+|+|++.++.|++.+++.+++.+++++
T Consensus 24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~--------------------~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~ 83 (467)
T PRK09556 24 FKPFMQSYLVVFIGYLTMYLIRKNFKAA--------------------QNDMISTYGLSTTELGMIGLGFSITYGVGKTL 83 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhh--------------------hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555666666667667777777665 56778889999999999999999999999999
Q ss_pred hHHHHHhhchhHHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHH
Q 018042 102 ASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGF 176 (361)
Q Consensus 102 ~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~ 176 (361)
.|+++||+|||+++..+.++++++++..+. +++++.+++.|++.|++.+...+....+++|++|+++|+++++++
T Consensus 84 ~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~ 163 (467)
T PRK09556 84 VGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFW 163 (467)
T ss_pred hhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEee
Confidence 999999999999999888888777766655 589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCChhHHHhhCCCHHHHHHHHHHhhCCcchH
Q 018042 177 QFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVE 255 (361)
Q Consensus 177 ~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (361)
..+..+|.++++++...+.......+||..|.+.+++.++..+..+ +.+++|+..... + .++ . .....+.+
T Consensus 164 ~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~-~-~~~---~---~~~~~~~~ 235 (467)
T PRK09556 164 NISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG-K-AEE---I---FGEPISEE 235 (467)
T ss_pred ecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC-C-hhh---c---ccCccchh
Confidence 9999999999988865444321112699988887777766655544 467766421110 0 111 0 00000000
Q ss_pred HHHHHHHHHHhhhhhcccchhhhc-ccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhc
Q 018042 256 AEFDDLLKASSTAKTINHPFKKII-QRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECG 333 (361)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~ 333 (361)
. + +.+ +.+.+.++.+ +...+.+.++...+..++..........|.|.|++ ..|+|..+++.......++
T Consensus 236 ~-------~-~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~ 306 (467)
T PRK09556 236 D-------K-ETE-STDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIG 306 (467)
T ss_pred h-------h-ccc-cccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 0 0 000 0001111111 11112233444444444444555668889999885 4699999999999889999
Q ss_pred ccccccchhhHHHHhhhccceeec
Q 018042 334 GSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 334 ~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
.++|.++.|+ ++||++||+...
T Consensus 307 ~~ig~~~~G~--lsDr~g~r~~~~ 328 (467)
T PRK09556 307 ALVGSLLWGW--LSDLANGRRALV 328 (467)
T ss_pred HHHHHHHHHH--HHHHHCCCchHH
Confidence 9999999999 699999987654
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=5e-29 Score=227.91 Aligned_cols=286 Identities=13% Similarity=0.110 Sum_probs=206.5
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHh
Q 018042 22 TAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFV 101 (361)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (361)
++.++.......++.+...++....+.. .|.+.+++|++.++.+++.+.+.+++.+++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~ 77 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAA--------------------MPEMLADLGLSRSDIGLLATLFYITYGVSKFV 77 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHh--------------------hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 3334444444555556666655554444 55667788999999999999999999999999
Q ss_pred hHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHH
Q 018042 102 ASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIG 181 (361)
Q Consensus 102 ~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~ 181 (361)
.|+++||+|||+++.++.++..+++++.+++++++.+++.|++.|++.|...+....++.|++|+++|++++++.+.+..
T Consensus 78 ~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 157 (434)
T PRK11663 78 SGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHN 157 (434)
T ss_pred hhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHh-cccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHH
Q 018042 182 IGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDD 260 (361)
Q Consensus 182 ~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (361)
+|.++++.+...+.. ..+||+.|++.+++.++..+. .+++||+|++...+.. .+..++ .++.
T Consensus 158 ~g~~~~~~~~~~l~~---~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~----------~~~~--- 220 (434)
T PRK11663 158 VGGALIPLVVGAIAL---HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSV-GEWRHD----------ALEL--- 220 (434)
T ss_pred HHHHHHHHHHHHHHH---cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCc-cccccc----------cccc---
Confidence 999999998776653 358999999887776655443 3557887754211110 000000 0000
Q ss_pred HHHHHhhhhhcccchhhhcc-cCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccc
Q 018042 261 LLKASSTAKTINHPFKKIIQ-RKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGF 338 (361)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~ 338 (361)
.++.+..+.+.++.++ ...+++.++...+..+........+..|.|.+++ +.|++..+++.....+.+++++|.
T Consensus 221 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~ 296 (434)
T PRK11663 221 ----AQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA 296 (434)
T ss_pred ----chhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 0000000112222221 1112233333333333334445567788999985 569999999999999999999999
Q ss_pred cchhhHHHHhhh
Q 018042 339 GRNMWVKWMNRV 350 (361)
Q Consensus 339 ~~~~~~~l~dr~ 350 (361)
++.|+ +.||+
T Consensus 297 ~~~g~--l~dr~ 306 (434)
T PRK11663 297 LVAGW--GSDKL 306 (434)
T ss_pred HHHhh--hHHHh
Confidence 99999 69998
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.96 E-value=8.8e-29 Score=224.84 Aligned_cols=279 Identities=19% Similarity=0.205 Sum_probs=215.4
Q ss_pred HHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhh
Q 018042 23 AFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVA 102 (361)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (361)
++.|....++.+..+.++++....+.. .|.+.+++|++.++.+++.+.+.++..+++++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~ 70 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVA--------------------APRMAQEFGLDVAQMGWAFSAGILGLLPGALLG 70 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 366777777777888889988777665 566677889999999999999999999999999
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHH
Q 018042 103 SSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGI 182 (361)
Q Consensus 103 g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~ 182 (361)
|+++||+|||+++..+.++..++.++..++++++.+++.|++.|++.+...+....++.|++|+++|++++++.+.+..+
T Consensus 71 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 150 (406)
T PRK11551 71 GRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPF 150 (406)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHH
Q 018042 183 GALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDL 261 (361)
Q Consensus 183 g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (361)
|..+++.++..+.. ..+||+.|++.++..++..+.. .++||+|++..++++ +++.+
T Consensus 151 g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~------------------- 207 (406)
T PRK11551 151 GGALASVIGVLAAG---DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA-GKQRA------------------- 207 (406)
T ss_pred HHHHHHHHHHHHcc---ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc-chhhh-------------------
Confidence 99999998765543 3579999988776655555444 457888754322111 00000
Q ss_pred HHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccch
Q 018042 262 LKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRN 341 (361)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~ 341 (361)
...+..+++...++.. .....++......+....|.|.++++.|++..+.+.......++.+++.++.
T Consensus 208 -----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 275 (406)
T PRK11551 208 -----------PVLRALFGEGRATATL-LLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLI 275 (406)
T ss_pred -----------hhHHHHhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHH
Confidence 0001111111111111 1222223333344566778899998889999999999999999999999999
Q ss_pred hhHHHHhhhccceeecc
Q 018042 342 MWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 342 ~~~~l~dr~grr~~~~~ 358 (361)
++ +.||+|||+.+..
T Consensus 276 g~--l~dr~g~~~~~~~ 290 (406)
T PRK11551 276 GA--LMDRLRPRRVVLL 290 (406)
T ss_pred HH--HHHHHhHHHHHHH
Confidence 99 6999999887653
No 19
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=5.5e-28 Score=221.09 Aligned_cols=281 Identities=16% Similarity=0.212 Sum_probs=191.7
Q ss_pred HHHHHHHHHhhhhccccccccccccCChHHH-HhhchhhhhcccccccccccccCCchhHHHHH-----HHHHHHHHHHH
Q 018042 26 ILSCMMAGMGGVIFGYDIGISGGVTSMEPFL-EKFFPEVHRKMKEDTKISNYCKFDSQLLTSFT-----SSLYVAGLVAS 99 (361)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 99 (361)
+.......++.++++||....+.+ .+..+ +.++| +.++. .++.. ++.+++..+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~----------------~~~~~-~~~~~~~~~~~~~~~~~~~g~ 81 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGIT--AALVFNREFFP----------------QVSPA-MGTLAAFATFGVGFLFRPLGG 81 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCC----------------CCCcH-HHHHHHHHHHHHHHHHHhhHH
Confidence 345566667889999999886654 11111 12221 22333 34432 34556778999
Q ss_pred HhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccc
Q 018042 100 FVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVY--------MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGA 171 (361)
Q Consensus 100 ~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~ 171 (361)
++.|+++||+|||+++..+.++++++++++++++++. .++++|+++|++.|..++....++.|++|+++|++
T Consensus 82 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~ 161 (438)
T PRK09952 82 VVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAF 161 (438)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcH
Confidence 9999999999999999999999999999999999987 58889999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccC-----CCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHH
Q 018042 172 INNGFQFSIGIGALAANFINYGTEQIK-----GGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQ 246 (361)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~ 246 (361)
..+..+.+..+|.+++..+...+.... .+.+||+.|++.+++.++........||+|++...+++ .++
T Consensus 162 ~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~-~~~------ 234 (438)
T PRK09952 162 YSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHE-QAA------ 234 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhh-ccc------
Confidence 999999999999988876655443221 24689999998887765544444457888765322211 000
Q ss_pred HhhCCcchHHHHHHHHHHHhhhhhcccchh-hhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhH
Q 018042 247 RVRGTNDVEAEFDDLLKASSTAKTINHPFK-KIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVC 324 (361)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~ 324 (361)
.+.+.+.. .+++++ +.+.......+......+....|.|.+++ ..|.+.....
T Consensus 235 ----------------------~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~ 289 (438)
T PRK09952 235 ----------------------AKKRIPVIEALLRHP---GAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFL 289 (438)
T ss_pred ----------------------ccccCCHHHHHHHch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 00001111 122222 22222222233333445667778888875 4588876655
Q ss_pred HHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 325 QLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 325 ~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.......+..+++.++.|+ ++||+|||+++..+
T Consensus 290 ~~~~~~g~~~~i~~~~~g~--l~Dr~grr~~~~~~ 322 (438)
T PRK09952 290 NIGLLVGGLSCLTIPCFAW--LADRFGRRRVYITG 322 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHhCchHHHHHH
Confidence 5555566667788888898 69999999876543
No 20
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=5e-28 Score=221.42 Aligned_cols=274 Identities=17% Similarity=0.244 Sum_probs=194.3
Q ss_pred HHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHH-HHHH-----HHHHHHHHHh
Q 018042 28 SCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSF-TSSL-----YVAGLVASFV 101 (361)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~ 101 (361)
......++.+++.+|....+.. .|.+.++++.++.+.+.+ .+.. .++..+++++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~--------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~ 75 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFY--------------------ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIV 75 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4666667889999999988776 566777788777665443 3322 2233478999
Q ss_pred hHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchh
Q 018042 102 ASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVY--------MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAIN 173 (361)
Q Consensus 102 ~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~ 173 (361)
.|+++||+|||+.++.+.+++.+++++++++++++ .++++|++.|++.+...+....+++|++|+++|++++
T Consensus 76 ~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 155 (434)
T PRK15075 76 LGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYT 155 (434)
T ss_pred HHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHH
Confidence 99999999999999999999999999999999877 4688899999999999998999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccc-----CCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHh
Q 018042 174 NGFQFSIGIGALAANFINYGTEQI-----KGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRV 248 (361)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~ 248 (361)
++...+..+|..+++.++..+... .++.+||+.|++..+...+........||++++..++++
T Consensus 156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~------------ 223 (434)
T PRK15075 156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR------------ 223 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc------------
Confidence 999988888888877777665432 135699999987654432222222223443211100000
Q ss_pred hCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhhHHHh
Q 018042 249 RGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLS 327 (361)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~ 327 (361)
.+.++.+++..++ ++.+.......+.+....+.+..|.|.|+++ .|++..+++...
T Consensus 224 --------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~ 280 (434)
T PRK15075 224 --------------------PSMREIFRSLAAN---WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVT 280 (434)
T ss_pred --------------------cccccHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 0000111111111 1222222223333444566788899999976 699988888888
Q ss_pred hhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 328 KWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 328 ~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
....++++++.++.|+ ++||+|||+.+..
T Consensus 281 ~~~~~~~~~~~~~~g~--l~Dr~g~r~~~~~ 309 (434)
T PRK15075 281 LCVGVSNFIWLPIGGA--LSDRIGRRPVLIA 309 (434)
T ss_pred HHHHHHHHHHHHHHHH--HHHHhcchHHHHH
Confidence 8888999999999999 6999999987654
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.96 E-value=2e-28 Score=227.31 Aligned_cols=303 Identities=10% Similarity=0.021 Sum_probs=219.5
Q ss_pred HHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHH
Q 018042 25 VILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASS 104 (361)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (361)
+|.....++++.++...|.+..+.+ .|++.+++|.+.++.+|+.+.+.++..++.++.|+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a--------------------~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~ 63 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVA--------------------APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGA 63 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888889999999988777 67778889999999999999999999999999999
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcC-CcccccchhhHHHHHHHHH
Q 018042 105 VTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIG 183 (361)
Q Consensus 105 l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~-~~~~R~~~~~~~~~~~~~g 183 (361)
++||+|||++++.+.++..++++++++++|++.++++|+++|++.+...+.....+.+.+ |+++|+++++++.....+|
T Consensus 64 l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g 143 (495)
T PRK14995 64 LGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGG 143 (495)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998888888787776 6789999999999999999
Q ss_pred HHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHH------------HHHhhC
Q 018042 184 ALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLM------------LQRVRG 250 (361)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~------------~~~~~~ 250 (361)
..++|.+++.+.+. .+|||.|++...+.++..+.. +++||+++. +.++.+..... .+....
T Consensus 144 ~~~gp~lgg~l~~~---~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~---~~~~~d~~g~~~~~~~~~~l~~~~~~~~~ 217 (495)
T PRK14995 144 AAFGPLVGGILLEH---FYWGSVFLINVPIVLVVMGLTARYVPRQAGR---RDQPLNLGHALMLIVAILLLVYSAKTALK 217 (495)
T ss_pred HHHHHHHHHHhhcc---CChHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CCCCCChHhHHHHHHHHHHHHHHHHhccc
Confidence 99999998887754 589999999877666655444 457776531 11101110000 000000
Q ss_pred Cc-chHHHHHH-------HHHHHhhhhhcccch--hhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCC
Q 018042 251 TN-DVEAEFDD-------LLKASSTAKTINHPF--KKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLG 319 (361)
Q Consensus 251 ~~-~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s 319 (361)
.. +....... ...-...+.+.+.+. .++++++.. ....+..+..........++.|.+++. .|+|
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s 293 (495)
T PRK14995 218 GFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRII----LSGVVMAMTAMITLVGFELLMAQELQFVHGLS 293 (495)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 00 00000000 000000111111121 234444322 222233333333445667788888875 5999
Q ss_pred ChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 320 RLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 320 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+.+++.......++..++.++.|+ +.||+|+|+.+..+
T Consensus 294 ~~~ag~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~g 331 (495)
T PRK14995 294 PLEAGMFMLPVMVASGFSGPIAGI--LVSRLGLRLVATGG 331 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCchHHHHHH
Confidence 999999999999999999999999 69999998876544
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=99.96 E-value=5.7e-28 Score=218.19 Aligned_cols=241 Identities=16% Similarity=0.072 Sum_probs=188.3
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+.+++|.+.++.++..+.+.+++.+++++.|+++||+|||+++..+.++..++++.+++++|++.++++|++.|++.
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~ 111 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAH 111 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+...+...+++.|++|+++|++++++...+..+|..++++++..+.+ +.+||+.|++.+++.++..+.. .++||.|
T Consensus 112 ~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~---~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 112 AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ---YLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH---HhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 98899999999999999999999999999999999999999877654 3489999999888776665444 3366643
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+ ++ +++ .++.++.++++..+....... +. .........+
T Consensus 189 ~-----~~-~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~ 227 (390)
T PRK03545 189 S-----EH-SGS-------------------------------LKSLPLLFRRPALVSLYLLTV---VV-VTAHFTAYSY 227 (390)
T ss_pred C-----CC-cch-------------------------------HHHHHHHHhCcHHHHHHHHHH---HH-HHHHHHHHHH
Confidence 2 00 000 001233444432222222111 11 1122233455
Q ss_pred HHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceee
Q 018042 309 APLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 356 (361)
Q Consensus 309 ~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~ 356 (361)
.+.++++ .|.|..+++.......++++++.++.++ +.||++||++.
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~--l~dr~~~~~~~ 274 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSR--LGNRHPSGFLL 274 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHH--HhhccchhHHH
Confidence 5666654 6999999999999999999999999999 69999987653
No 23
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=9.6e-28 Score=221.71 Aligned_cols=308 Identities=12% Similarity=0.059 Sum_probs=217.0
Q ss_pred chHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchh----hhhcccccccccccccCCchhHHHHHHHHHHHHH
Q 018042 21 ITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPE----VHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGL 96 (361)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 96 (361)
..+.++.+..++.++..+...|....+.+. +...++-.++ .....+....-..|++++..+.|.+.+.+.+++.
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~ 90 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTM--VAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQI 90 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEE--EEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHH
Confidence 344455666666666666666776665542 1111100000 0000000111233789999999999999999999
Q ss_pred HHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhh
Q 018042 97 VASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINN 174 (361)
Q Consensus 97 ~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~ 174 (361)
+++++.|+++||+|||+++..+.+++.+++++..++ .+++.+++.|++.|++.+...+....+++|++|+++|+++++
T Consensus 91 ~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 91 IIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 999999999999999999999999999998887554 567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-ccCChhHHHhhCCCHHHHHHHHHHhhCCcc
Q 018042 175 GFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTND 253 (361)
Q Consensus 175 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (361)
+...+..+|.+++++++..+.+.. .+||+.|++.+++.++..+.+++ .+|+|+.. ++.+++|. +..++
T Consensus 171 ~~~~~~~~g~~i~~~l~~~l~~~~--~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~-~~i~~------ 239 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPISGWLCESW--GGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH--PCISKFEK-KYINS------ 239 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CCCCeehhhhhHHHHHHHHHHHHHhcCCcccC--CCCCHHHH-HHHHh------
Confidence 999999999999999977665421 38999999988887777665544 66776421 11111111 11000
Q ss_pred hHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhhHHHhhhhhh
Q 018042 254 VEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIEC 332 (361)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~ 332 (361)
..++++++.+.+.++++++++ +.++...+..++.....+.+..|+|.|+++ .|++..+++....+..+
T Consensus 240 -------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~ 308 (465)
T TIGR00894 240 -------SLQGQKGSTRQSLPIKAIPKS----LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308 (465)
T ss_pred -------hcccccCCCCCCCCHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence 000000011123345665544 444445555666666677888899999864 59999999999999999
Q ss_pred cccccccchhhHHHHhhhccce
Q 018042 333 GGSIGFGRNMWVKWMNRVRWRK 354 (361)
Q Consensus 333 ~~~~g~~~~~~~~l~dr~grr~ 354 (361)
+.+++.++.|+ ++||.++|+
T Consensus 309 ~~~i~~~~~g~--l~d~~~~~~ 328 (465)
T TIGR00894 309 FAWLCSIFAGY--LADFLKSSK 328 (465)
T ss_pred HHHHHHHHHHH--HHHHHHHcC
Confidence 99999999999 699987654
No 24
>TIGR00895 2A0115 benzoate transport.
Probab=99.95 E-value=6.6e-28 Score=218.34 Aligned_cols=301 Identities=22% Similarity=0.281 Sum_probs=212.4
Q ss_pred HHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHH
Q 018042 26 ILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSV 105 (361)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 105 (361)
+.....+.+..+..+++....+.. .|.+.+++|.+..+.+++.+...++..++.++.|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 75 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFA--------------------APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPL 75 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--------------------HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 334444444556666665554443 455577789999999999999999999999999999
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHH
Q 018042 106 TRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGAL 185 (361)
Q Consensus 106 ~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~ 185 (361)
+||+|||+.+..+.++..++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..
T Consensus 76 ~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 155 (398)
T TIGR00895 76 ADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAA 155 (398)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHH-hcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHH
Q 018042 186 AANFINYGTEQIKGGWGWRVSLALAAVPASILTL-GALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKA 264 (361)
Q Consensus 186 ~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~-~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (361)
+++.++..+.. +.+||+.+++.++...+..+ ...++||++++..++ + .+++.+..++.......+.+ ++..++
T Consensus 156 ~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 229 (398)
T TIGR00895 156 VGGFLAGWLIP---VFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-R-PETVRRIVNAIAPQMQAEAQ-SALPEQ 229 (398)
T ss_pred HHHHHHHHHhh---cccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-C-HHHHHHHHHHHHHhcccccc-cccccc
Confidence 99999766553 35899999887655554444 345689987765443 2 22222222221111100000 000000
Q ss_pred HhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhH
Q 018042 265 SSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWV 344 (361)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~ 344 (361)
.++++..+...+..++.+..++.. ...+..+...........+.|++.++.|.+..+.+.......++.+++.++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 307 (398)
T TIGR00895 230 KATQGTKRSVFKALFQGKTARITV-LLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGW- 307 (398)
T ss_pred ccccchhhHHHHHHhcchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 000000111122233332222222 223333344445566778889777888999999999999999999999999999
Q ss_pred HHHhhhcccee
Q 018042 345 KWMNRVRWRKL 355 (361)
Q Consensus 345 ~l~dr~grr~~ 355 (361)
++||++||+.
T Consensus 308 -l~~~~~~~~~ 317 (398)
T TIGR00895 308 -LADRLGPRVT 317 (398)
T ss_pred -HHhhcchHHH
Confidence 6999999844
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.95 E-value=5.2e-27 Score=208.92 Aligned_cols=239 Identities=15% Similarity=0.072 Sum_probs=175.7
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||++++.+......+.+.....++++.++++|++.|++.
T Consensus 14 lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~ 93 (368)
T TIGR00903 14 LSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQ 93 (368)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHh
Confidence 56778899999999999999999999999999999999999999876665555444433333379999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+. .......++|++|+++|++++++.+.+..+|.+++++++..+.. +.+||+.|++.+++.++..+.. +++||+|
T Consensus 94 ~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~---~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 94 PF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT---AGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 86 45666667999999999999999999999999999999887764 3589999999777776665544 5589987
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
++.. +..+ .+ + . .++++++++++ .++...+.+++.....+.+..|
T Consensus 170 ~~~~---~~~~--------------~~----~------~----~~~~~~ll~~~----~~~~~~~~~~~~~~~~~~~~~w 214 (368)
T TIGR00903 170 FQAA---EGFG--------------FK----D------A----VKEFGALAGRK----DLWIIGAILGFGVALFDNLAIW 214 (368)
T ss_pred CCCC---CCcc--------------hH----H------H----HHHHHHHHcCh----hHHHHHHHHHHHHHHHHHHHHH
Confidence 5321 0000 00 0 0 01245566553 3344445566666667788999
Q ss_pred HHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccc
Q 018042 309 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 353 (361)
Q Consensus 309 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr 353 (361)
+|.++++.|++.. .+.......+.++++ .++ ++||..||
T Consensus 215 lp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~--~~d~~~r~ 253 (368)
T TIGR00903 215 LEAALRPAGLEDI-AGDAVALAILAGLIG---VAV--IPDRVARA 253 (368)
T ss_pred HHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHH--hhHHhhhh
Confidence 9999988888764 555555555555544 355 47777553
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.95 E-value=7.9e-27 Score=210.67 Aligned_cols=244 Identities=15% Similarity=0.109 Sum_probs=188.5
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+++|+|+|.++.++..+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++++|++.++++|++.|++.
T Consensus 32 lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~ 111 (393)
T PRK09705 32 LPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGI 111 (393)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHH
Confidence 67778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc-cCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL-PETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~-~es~ 228 (361)
+...+....++.|++| ++|+++++.+..+..+|..+++.++..+.... .+||+.+.+.++..++..+..++. ++.|
T Consensus 112 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (393)
T PRK09705 112 GIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS--ETWYQTLAWWALPAVVALFAWWWQSAREV 188 (393)
T ss_pred HHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999997 78999999999988889888888876655432 279998876555544333322222 1111
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+ + + +++ +...++.+++ ++.+ ...+.++.....+.....|
T Consensus 189 ~------~---~-------------------------~~~---~~~~~~~l~~---~~~~-~l~~~~~~~~~~~~~~~~~ 227 (393)
T PRK09705 189 A------S---S-------------------------HKT---TTTPVRVVFT---PRAW-TLGVYFGLINGGYASLIAW 227 (393)
T ss_pred c------c---c-------------------------cCC---CcCCcccccC---HhHH-HHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 000 0011122222 1222 2222333334455677888
Q ss_pred HHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 309 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 309 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.|.++++.|.+..+++.....+.++.++|.++.++ +.||.+||+....+
T Consensus 228 lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~--l~~r~~~~~~~~~~ 276 (393)
T PRK09705 228 LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPA--MARHQDRRKLLMLA 276 (393)
T ss_pred HHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHH--HHhhccchHHHHHH
Confidence 99999888999999999999999999999999999 69999998876543
No 27
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.1e-29 Score=215.31 Aligned_cols=279 Identities=16% Similarity=0.202 Sum_probs=212.7
Q ss_pred HHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhh
Q 018042 23 AFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVA 102 (361)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (361)
...++.+.++++..++...|...+..+ .+++++.||++.+..|++.+.+.+.+++.+|+.
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv--------------------~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~ 88 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGV--------------------LKEVQTYFNISDSELGLLQTVFIVVFMIASPLF 88 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhh--------------------hHHHHHhcCCCchhccchhHHHHHHHHHHHHHH
Confidence 345566777777888889999887666 567788999999999999999999999999999
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHH
Q 018042 103 SSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGI 182 (361)
Q Consensus 103 g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~ 182 (361)
|+++|||+||+++.+|..++.++.+.++++..+|++.++|.+.|+|.+...+..+++++|.+|.++|++++++++.+..+
T Consensus 89 gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv 168 (493)
T KOG1330|consen 89 GYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV 168 (493)
T ss_pred HHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHH
Q 018042 183 GALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDL 261 (361)
Q Consensus 183 g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (361)
|..+|.+++..+..... .|||.|+..++++++..++. ++.+|++|- . .+|.+. ++..
T Consensus 169 GsglG~vvgs~va~~~~--~Wr~af~~~avl~vi~~~L~~~f~~eP~rg-----a-~~~~~~-------~~~~------- 226 (493)
T KOG1330|consen 169 GSGLGYVVGSVVASLTF--WWRWAFRGSAVLGVIVGLLVFLFVREPERG-----A-RDEVDG-------ENKM------- 226 (493)
T ss_pred ccceeEEeeeeeccCcc--ceEEEEEeehHHHHHHHHHHHhhccCcccc-----c-cccccc-------CCcC-------
Confidence 99999999988887765 49999999999999888776 557776531 1 111000 0000
Q ss_pred HHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH----hcCCCChhhHHHhhhhhhccccc
Q 018042 262 LKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR----TIGLGRLKVCQLSKWIECGGSIG 337 (361)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~s~~~~~~~~~~~~~~~~~g 337 (361)
........++.+...+.+. .....+.+.........+..|.|.+.. -.|++.....++..+...++.+|
T Consensus 227 ---~~~~ts~~kDl~~l~~~~v----~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lG 299 (493)
T KOG1330|consen 227 ---VKPFTSVWKDLKVLAKIKV----FVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLG 299 (493)
T ss_pred ---CCCccchHHHHHHHHccCc----eeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhh
Confidence 0000011112222222221 111112222222223445566665542 33888889999999999999999
Q ss_pred ccchhhHHHHhhhcc
Q 018042 338 FGRNMWVKWMNRVRW 352 (361)
Q Consensus 338 ~~~~~~~~l~dr~gr 352 (361)
.+.+|. ++||+-|
T Consensus 300 vl~Ggi--isd~~~~ 312 (493)
T KOG1330|consen 300 VLFGGI--ISDKLSR 312 (493)
T ss_pred heehHH--HHHHHHH
Confidence 999999 5998654
No 28
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.95 E-value=1.2e-26 Score=209.36 Aligned_cols=238 Identities=16% Similarity=0.162 Sum_probs=184.2
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|++.+++|++.++.++..+++.++..+++++.|+++||+|||++++.+.++.+++.++++++++++.++++|++.|++.
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 122 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLAL 122 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhh
Confidence 45567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~ 228 (361)
+...+....++.|++|+++|++++++...+.++|..++|+++..+.+. .+||+.|++.+++.++..+... ..||+|
T Consensus 123 g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 123 GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL---IGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999999999999999999998877643 4899999988776665544433 366653
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+. ++ + ..++.++.++++. .+. ..+..+...........+
T Consensus 200 ~~----~~---~------------------------------~~~~~~~~l~~~~---~~~-~~~~~~~~~~~~~~~~~~ 238 (394)
T PRK10213 200 GE----PS---H------------------------------QKQNTFRLLQRPG---VMA-GMIAIFMSFAGQFAFFTY 238 (394)
T ss_pred cc----cc---c------------------------------chhHHHHHhcCHH---HHH-HHHHHHHHHHHHHHHHHH
Confidence 10 00 0 0001223333322 221 112222222222333344
Q ss_pred -HHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccc
Q 018042 309 -APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 353 (361)
Q Consensus 309 -~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr 353 (361)
.|.+.++.|++..+.+.......++++++.++.++ +.||.+++
T Consensus 239 ~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~--l~~r~~~~ 282 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSF--ILKRSVKL 282 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH--HHhccchh
Confidence 47777778999999999888889999999998888 58885444
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=3.3e-26 Score=213.41 Aligned_cols=311 Identities=15% Similarity=0.179 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhh
Q 018042 23 AFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVA 102 (361)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (361)
++.+.....+.++.+.++++....+.. .|.+.+++|++..+.+++.+.+.++..+++++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 75 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLV--------------------LTEVQGEFGLTTVQAASLISAAFISRWFGGLLL 75 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666667777888887766544 455677889999999999999999999999999
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHH
Q 018042 103 SSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGI 182 (361)
Q Consensus 103 g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~ 182 (361)
|+++||+|||++++.+.++..+++++.+++++++.+++.|++.|++.+..++....++.|++|+++|++++++...+..+
T Consensus 76 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 155 (496)
T PRK03893 76 GAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSI 155 (496)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHH-HH
Q 018042 183 GALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFD-DL 261 (361)
Q Consensus 183 g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 261 (361)
|..+++.+...+.. +.+||+.|++..+..++..+.....||++++..++++ +++.++..+.....+....... ..
T Consensus 156 g~~~~~~~~~~l~~---~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (496)
T PRK03893 156 GAVVAAQVYSLVVP---VWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAG-KAPVRTMVDILYRGEHRIINILLTL 231 (496)
T ss_pred HHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccc-cccchhHHHHHhcchhHHHHHHHHH
Confidence 99999999776654 4589999987655544443333457887654322211 1111111111100000000000 00
Q ss_pred HH----HHhhhhhcccchh-------------hhc--ccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCCh
Q 018042 262 LK----ASSTAKTINHPFK-------------KII--QRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRL 321 (361)
Q Consensus 262 ~~----~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~ 321 (361)
.. ...........+. ... ....+++.........+..+........++|.+++ +.|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~ 311 (496)
T PRK03893 232 AAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPH 311 (496)
T ss_pred HHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHH
Confidence 00 0000000000000 000 01111222222222222222222345678899985 7799999
Q ss_pred hhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 322 KVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+.+.+.....++.+++.++.++ ++||+|||+++..+
T Consensus 312 ~~g~~~~~~~~~~~~g~~~~g~--l~dr~g~~~~~~~~ 347 (496)
T PRK03893 312 TVANVLFFSGFGAAVGCCVGGF--LGDWLGTRKAYVCS 347 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHhcchHHHHHH
Confidence 9999999999999999999999 69999999876543
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.95 E-value=5.8e-27 Score=216.26 Aligned_cols=252 Identities=10% Similarity=0.051 Sum_probs=179.4
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+.+++|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++.+++++++.++++|++.|++.
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~ 138 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSL 138 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 45567888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc------cCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ------IKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
+.. .....+++|++|+++|++++++......+|..+++.+...+.. ..+..+||+.|++.+++.++..+..++
T Consensus 139 ~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 139 ATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred Hhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 764 4456789999999999999999887666666666554433221 111248999999988888776666555
Q ss_pred cc-CChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcch
Q 018042 224 LP-ETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 302 (361)
Q Consensus 224 ~~-es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
++ +.|+. + .++.++ + .+ .++......+++.++++ +.+. ..+.++......
T Consensus 218 ~~~~~p~~-----~-~~~~~~---~--~~--------------~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~ 268 (476)
T PLN00028 218 LGQDLPDG-----N-YRELKK---S--GT--------------MPKDSFSKVLRYGVTNY---RTWI-LALTYGYSFGVE 268 (476)
T ss_pred HcCcCCCC-----c-hhhHHh---c--Cc--------------cccccHHHHHHHHHcCc---hhHH-HHHHHHHHHHHH
Confidence 44 33320 0 000000 0 00 00000011223333332 2222 222233333333
Q ss_pred hhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccc
Q 018042 303 NVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 353 (361)
Q Consensus 303 ~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr 353 (361)
..+..+.|.++. +.|++..+++.+..+..++++++.++.|+ ++||++||
T Consensus 269 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~--lsDr~~~r 318 (476)
T PLN00028 269 LTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGY--LSDVAARR 318 (476)
T ss_pred HHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHHHh
Confidence 456667888875 45999999999999999999999999999 69999876
No 31
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.2e-26 Score=209.96 Aligned_cols=289 Identities=18% Similarity=0.205 Sum_probs=221.9
Q ss_pred HHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHH
Q 018042 25 VILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASS 104 (361)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 104 (361)
.+.+...++...+....+...++... .-.+.+|.++...+.+.+.+++.++++++.++++.
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~-------------------l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~ 103 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNAS-------------------LSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGL 103 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHH-------------------HcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHH
Confidence 44555555666666666666554432 22356888899999999999999999999999999
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHH
Q 018042 105 VTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGA 184 (361)
Q Consensus 105 l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~ 184 (361)
+.||++-.+.+....+++.+..++.+...|++.+++.|++.|+.++..+|....+++.|+.+++|+..++++.+..++|+
T Consensus 104 L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~ 183 (495)
T KOG2533|consen 104 LGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGN 183 (495)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhh
Confidence 99999999999999999999998888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccC---CCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHH
Q 018042 185 LAANFINYGTEQIK---GGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDD 260 (361)
Q Consensus 185 ~~~~~~~~~~~~~~---~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (361)
++|++++..+..+. ...||||.|++.++++++..+++ +++|+.|....-.. ++|.+-..++.+..+
T Consensus 184 i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~--~~ek~~~~~~~~~~~-------- 253 (495)
T KOG2533|consen 184 IFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLT--DEEKELVVERLRESP-------- 253 (495)
T ss_pred HHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccc--hHHHHHHHHHHHhcc--------
Confidence 99999988864322 23599999999999999888777 45999986221000 111111111111000
Q ss_pred HHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhhHHHhhhhhhccccccc
Q 018042 261 LLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFG 339 (361)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~ 339 (361)
.....++.++.++++.+++ +.++...+..++.....+++.+|+|.++++ .|+|..++..+...+.++++++.+
T Consensus 254 --~~~~~~~~~~~~~~~a~~d----p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i 327 (495)
T KOG2533|consen 254 --SGGIENKFKWKGFKEALKD----PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLI 327 (495)
T ss_pred --CCCcccccCHHHHHHHHhc----hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHH
Confidence 0000011223344555555 444556666677777778999999999987 579999999999999999999999
Q ss_pred chhhHHHHhhh
Q 018042 340 RNMWVKWMNRV 350 (361)
Q Consensus 340 ~~~~~~l~dr~ 350 (361)
+.++ ++||.
T Consensus 328 ~ag~--lsdr~ 336 (495)
T KOG2533|consen 328 LAGY--LSDRL 336 (495)
T ss_pred HHHH--HHHHH
Confidence 9999 69994
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.94 E-value=6.2e-27 Score=211.67 Aligned_cols=264 Identities=14% Similarity=0.144 Sum_probs=198.8
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+++++|++..+.+++.+++.++..++.++.|+++||+|||+++..+.++..++.++.+++++++.++++|++.|++.
T Consensus 17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 96 (399)
T TIGR00893 17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAE 96 (399)
T ss_pred HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 45567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~ 228 (361)
+...+....++.|++|+++|++.+++.+....+|.++++.++..+.. +.+||+.|++.+++.++..+..+ +.||+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI---HFSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH---hCCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 99999999999999999999999999999999999999999776553 34799999988877776665553 466665
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+... ..++++.+...++...+ .++.++++..+...++.+++ +.++...+..+...........+
T Consensus 174 ~~~~--~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 237 (399)
T TIGR00893 174 QKAK--WLTEEEKYIVVGGLLAE----------QQGKGPSTPKKYQIKELLKD----RRVWGLALGQFLVNIGLGFFLTW 237 (399)
T ss_pred Cccc--cCCHHHHhhcchhhccc----------cccccccCCCccchHHHhcC----HHHHHHHHHHHHHHhHHHHHHHH
Confidence 3210 11011111100000000 00001111122234444443 22333344444445556677888
Q ss_pred HHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccce
Q 018042 309 APLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK 354 (361)
Q Consensus 309 ~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~ 354 (361)
.|.++++ .|.+..+.+.......++.+++.++.++ +.||++||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~ 282 (399)
T TIGR00893 238 FPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGR--LSDLLLRRG 282 (399)
T ss_pred HHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHH--HHHHHhhcc
Confidence 8888854 5899899999999999999999999999 699999986
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.94 E-value=5e-27 Score=211.01 Aligned_cols=250 Identities=13% Similarity=0.080 Sum_probs=186.0
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+++++|++.++.+++.+++.++..+++++.|+++||+|||+++..+.++.++++++++++++++.++++|++.|++.
T Consensus 26 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 105 (377)
T TIGR00890 26 APPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGV 105 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 55667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~ 228 (361)
+..++.....+.|++| ++|+++.++...+..+|..+++++...+. +..+||+.|++.+++.++..+..+ +++|+|
T Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 106 GIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVI---NLEGVPAAFIYMGIIFLLVIVLGAFLIGYPP 181 (377)
T ss_pred HHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHH---hcccHHHHHHHHHHHHHHHHHHHHHheecCc
Confidence 9888888888999987 67999999999999999877655543333 235899999998888777666554 455543
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+... +++ + +. ++.+.+.++.++++..+.... ..+...........+
T Consensus 182 ~~~~-~~~--~-------------~~--------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 227 (377)
T TIGR00890 182 GQLI-KTN--I-------------EV--------------SVKDYTVWEMLRTPQFWVLYL----SFFLNAVSGLLLIGL 227 (377)
T ss_pred hhcc-ccC--c-------------cc--------------chhhhhHHHHHcCccHHHHHH----HHHHHhHHHHHHHHH
Confidence 2100 000 0 00 000112233444432222221 222222222334445
Q ss_pred HHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 309 APLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 309 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.+.+.++.|.+..+.+.......++.+++.++.++ +.||++||+.+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--l~dr~g~~~~~~~~ 276 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGA--LSDKIGRQKTMSIV 276 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhhhHH
Confidence 56666778888888888889999999999999999 69999999876543
No 34
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=3e-26 Score=207.16 Aligned_cols=269 Identities=12% Similarity=0.084 Sum_probs=201.6
Q ss_pred HHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHH
Q 018042 27 LSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVT 106 (361)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 106 (361)
...+.+.++.+..+.+....+.. .|++.+++|+|.++.+++.+.+.+++.++.++.|++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~--------------------~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~ 66 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMV--------------------MGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLM 66 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh--------------------hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555667777776665555 5667888899999999999999999999999999999
Q ss_pred HhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHH
Q 018042 107 RAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALA 186 (361)
Q Consensus 107 d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~ 186 (361)
||+|||+++..+.++..++.++.+++++++.++++|++.|++.+...+....++.|++|+++|+++++..+....+|..+
T Consensus 67 dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 146 (394)
T PRK03699 67 EIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMI 146 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999989889999999999999999999888888888888
Q ss_pred HHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHh
Q 018042 187 ANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASS 266 (361)
Q Consensus 187 ~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (361)
+|.+...+.. +..+||+.|.+.+++.++..+..++ .+.|+. ++++ + +
T Consensus 147 ~~~~~~~l~~--~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~--~-----------~--------------- 193 (394)
T PRK03699 147 FPIIAAYLLA--RSIEWYWVYACIGLVYVAIFILTLF-SEFPAL--GKHA--P-----------K--------------- 193 (394)
T ss_pred HHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHHh-cCCccc--cccC--c-----------c---------------
Confidence 8887654432 2248999999877776655444332 222210 0000 0 0
Q ss_pred hhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHH
Q 018042 267 TAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVK 345 (361)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~ 345 (361)
++ +...+ ...+ +.++...+..++.....+.+..|.|.+++ +.|+|..+++.+...+.++..+|.++.++
T Consensus 194 ~~---~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~-- 263 (394)
T PRK03699 194 AD---KPVAK----EKWG-IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSF-- 263 (394)
T ss_pred cc---Ccccc----ccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHH--
Confidence 00 00000 1111 22222333334444445677889999995 56999999999999999999999999999
Q ss_pred HHhhhccceeecc
Q 018042 346 WMNRVRWRKLDIY 358 (361)
Q Consensus 346 l~dr~grr~~~~~ 358 (361)
++||++||+.+..
T Consensus 264 l~dr~~~~~~l~~ 276 (394)
T PRK03699 264 IVRFFDLQRILTV 276 (394)
T ss_pred HHHHhchhhHHHH
Confidence 6999999987653
No 35
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.94 E-value=2.9e-26 Score=206.38 Aligned_cols=243 Identities=14% Similarity=0.127 Sum_probs=186.8
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+++|+|++.++.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|++.
T Consensus 26 l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~ 105 (382)
T PRK10091 26 LTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPH 105 (382)
T ss_pred hHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Confidence 55667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+...+....++.|++|+++|++++++...+..+|..++++++..+.. ..+||+.|++.++..++..+.. .++||.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 106 GAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---EFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh---hccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99888888999999999999999999999999999999998776654 3489999999887766655544 4477753
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+ +.+ . + . ++.+ +.++++ +.+... ...+...........+
T Consensus 183 ~----~~~-~-~-------------~-----------------~~~~-~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~ 221 (382)
T PRK10091 183 D----EAK-G-G-------------L-----------------REQF-HFLRSP---APWLIF-AATMFGNAGVFAWFSY 221 (382)
T ss_pred c----ccc-c-C-------------H-----------------HHHH-HHhcCh---HHHHHH-HHHHHHHHHHHHHHHH
Confidence 1 000 0 0 0 0001 112221 111111 1111211222233344
Q ss_pred HHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 309 APLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 309 ~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.+.+++ ..|+++.+.+.+.....++.+++.++.++ +.||+++|+++..
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~--l~~r~~~~~~~~~ 270 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGR--LSGRYSPLRIAAV 270 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHhe--eccccCchhHHHH
Confidence 455554 56999999999999999999999999999 6999999887654
No 36
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.94 E-value=4.1e-26 Score=207.30 Aligned_cols=281 Identities=13% Similarity=0.077 Sum_probs=206.6
Q ss_pred CcchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHH
Q 018042 19 GKITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVA 98 (361)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (361)
.+.++..++..+.+.+..+...++...+.+. .|.+.+++|.+..+.++..+.+.++..++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 64 (406)
T PRK15402 5 ARLGRQALLFPLCLVLFEFATYIANDMIQPG--------------------MLAVVEDFNAGAEWVPTSMTAYLAGGMFL 64 (406)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHhhhhhHhcc--------------------hHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 3445666777777777777767766665544 44557778999999999999999999999
Q ss_pred HHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHH
Q 018042 99 SFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQF 178 (361)
Q Consensus 99 ~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~ 178 (361)
+++.|+++||+|||++++.+.++..+++++..++++++.+++.|++.|++.+...+....++.|.+|+++|.+..++...
T Consensus 65 ~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 144 (406)
T PRK15402 65 QWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMAN 144 (406)
T ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999998888
Q ss_pred HHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHH
Q 018042 179 SIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAE 257 (361)
Q Consensus 179 ~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (361)
...+|..++|.++..+.+ +.+||+.+++.++..++..+.. +..||+++.. ++ ++ +
T Consensus 145 ~~~~~~~~g~~i~~~l~~---~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~-------------~---- 200 (406)
T PRK15402 145 VALLAPLLGPLVGAALIH---VLPWRGMFVLFAALAALSFFGLWRAMPETAGRV---GE-KL-------------S---- 200 (406)
T ss_pred HHHHHHHHHHHHHHHHHH---ccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc---cc-cc-------------c----
Confidence 888888999998776654 3489999998887777665544 3467764210 00 00 0
Q ss_pred HHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccc
Q 018042 258 FDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSI 336 (361)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~ 336 (361)
.+ +..+++++.++++.... ..+..+...........+.|.++. ..|+++.+.+.......++.++
T Consensus 201 ~~----------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~ 266 (406)
T PRK15402 201 LK----------ELGRDYKLVLKNRRFVA----GALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIA 266 (406)
T ss_pred HH----------HHHHHHHHHHcCcHHHH----HHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 00 00112344444432222 112222121222334455677764 5699988888877777778888
Q ss_pred cccchhhHHHHhhhccceeeccc
Q 018042 337 GFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 337 g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
|.++.++ +.||+++|+.+..+
T Consensus 267 g~~~~g~--l~~r~~~~~~~~~~ 287 (406)
T PRK15402 267 GNLTLAR--LTSRRPLRSLIRMG 287 (406)
T ss_pred HHHHHHH--HHHhcCHHHHHHHH
Confidence 9999998 69999998876543
No 37
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.94 E-value=5.2e-26 Score=209.10 Aligned_cols=258 Identities=16% Similarity=0.079 Sum_probs=181.0
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV----NVYMLIFGRLLL 145 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~ 145 (361)
.|.+.++ |++..+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+..++++ +++.+++.|++.
T Consensus 52 ~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (452)
T PRK11273 52 MPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLC 130 (452)
T ss_pred hHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHH
Confidence 3445666 88999999999999999999999999999999999999999999999998887753 778889999999
Q ss_pred HhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHH-HHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHh-ccc
Q 018042 146 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGAL-AANFINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALF 223 (361)
Q Consensus 146 G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~ 223 (361)
|++.+...+.....+.|++|+++|++++++++.+..+|.. .+++++...... .+||+.|++.+++.++..+. .++
T Consensus 131 gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---~gw~~~f~i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 131 GWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF---NDWHAALYMPAFAAILVALFAFAM 207 (452)
T ss_pred HHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888899999999999999999999988864 455543322221 38999999987776665444 456
Q ss_pred ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcc-cCchhHHHHHHHHHHHHHhcch
Q 018042 224 LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQ-RKYRPQLLMAMAIPFFQQVTGI 302 (361)
Q Consensus 224 ~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
+||+|+....+ + +++.++ + .++ ..+++++.+.+.++.++ ...+.+.++...+..++.....
T Consensus 208 ~~~~~~~~~~~-~-~~~~~~---~---~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 269 (452)
T PRK11273 208 MRDTPQSCGLP-P-IEEYKN---D---YPD----------DYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR 269 (452)
T ss_pred ccCCHhhcCCC-C-hhhhhh---c---ccc----------ccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 78887542111 0 111000 0 000 00000000111222111 1111233333333333333344
Q ss_pred hhhHHcHHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhc
Q 018042 303 NVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVR 351 (361)
Q Consensus 303 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~g 351 (361)
+....|.|.++++ .|++..+++.+.....++.+++.++.|+ ++||++
T Consensus 270 ~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~--l~dr~~ 317 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW--MSDKVF 317 (452)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHc
Confidence 6678899999976 5899889888888888999999999999 699994
No 38
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.94 E-value=7.8e-27 Score=217.03 Aligned_cols=299 Identities=14% Similarity=0.098 Sum_probs=212.7
Q ss_pred HHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh
Q 018042 29 CMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA 108 (361)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 108 (361)
...++++.+...++....+.. .|.+.+++|.+.++.+++.+.+.++..++.++.|+++||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~--------------------~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 63 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVA--------------------IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR 63 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH
Confidence 344555667777777766555 566788889999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHH
Q 018042 109 FGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAAN 188 (361)
Q Consensus 109 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~ 188 (361)
+|||++++.+.++..++.+++++++|++.++++|++.|++.+...+....++.|++|+++|+++++++..+..+|..+++
T Consensus 64 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 143 (485)
T TIGR00711 64 FGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGP 143 (485)
T ss_pred hCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHH------------HHHhhCCc--c
Q 018042 189 FINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLM------------LQRVRGTN--D 253 (361)
Q Consensus 189 ~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~------------~~~~~~~~--~ 253 (361)
.+++.+.+ +.+||+.|++.+.+.++..+.. ++.||+++. ++++.+..... ..+-.... +
T Consensus 144 ~~~~~l~~---~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 217 (485)
T TIGR00711 144 TLGGWIIE---NYHWRWIFLINVPIGIIVVVVAFFILPRDKPA---ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFD 217 (485)
T ss_pred ccHhHhcc---CcCceehhhhhhHHHHHHHHHHHHHcCCcccc---ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 99776654 4589999998877766665544 346664321 11101111000 00000000 0
Q ss_pred hHHHHHHH---------HHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhh
Q 018042 254 VEAEFDDL---------LKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKV 323 (361)
Q Consensus 254 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~ 323 (361)
........ ....+..++.+....+.++++...... +..+..........++.|.++++ .|.++.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~ 293 (485)
T TIGR00711 218 SNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGC----VYMSLLGLGLYGSFYLLPLYLQQVLGYTALQA 293 (485)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 00000000 000001111111112344443332222 22222233345667788988875 59999999
Q ss_pred HHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 324 CQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 324 ~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+.......++.+++.++.++ +.||+|||+++..+
T Consensus 294 g~~~~~~~~~~~~~~~~~g~--l~~r~~~~~~~~~g 327 (485)
T TIGR00711 294 GLHILPVGLAPMLSSPIAGR--MGDKIDPRKLVTIG 327 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHhhcCcHHHHHHH
Confidence 99999999999999999999 69999999876544
No 39
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=8.5e-26 Score=204.13 Aligned_cols=256 Identities=16% Similarity=0.194 Sum_probs=211.9
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~ 151 (361)
+.+++++.++.+++.+.++.|+.+++++.|++.||+|-|+++..+.++.++++++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999998875 445778899999999999
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCChhH
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETPNS 230 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~~~ 230 (361)
.++....+.+.|.|++||++..++...+..+|.+++-++++.+.+. ..||++.|++.++++++..++++ +..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999998887777754 35999999999999999888774 46777753
Q ss_pred HHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHH
Q 018042 231 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 310 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (361)
. +.-+++|.+...+.. .+.+.+++.+.++++++++ +.++...+..++...+++.+..|+|
T Consensus 223 h--~~is~~El~~I~~~k--------------~~~~~~~~~~vP~~~i~ts----~~vwai~~~~f~~~~~~~~l~~y~P 282 (466)
T KOG2532|consen 223 H--PNISEKELKYIEKGK--------------SEAHVKKKPPVPYKAILTS----PPVWAIWISAFGGNWGFYLLLTYLP 282 (466)
T ss_pred C--CCCCHHHHHHHHhcc--------------cccccCCCCCCCHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 111122221111110 0011111136688998887 6666777788888888999999999
Q ss_pred HHHHhc-CCCChhhHHHhhhhhhcccccccchhhHHHHhhhccc
Q 018042 311 LLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 353 (361)
Q Consensus 311 ~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr 353 (361)
.|+++. |++..+.+++.++..+...+..+++|. ++||..+|
T Consensus 283 tY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~--lsD~l~~~ 324 (466)
T KOG2532|consen 283 TYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQ--LSDRLTFR 324 (466)
T ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhc
Confidence 999765 999999999999999999999999999 69998775
No 40
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.94 E-value=9.7e-26 Score=202.44 Aligned_cols=239 Identities=13% Similarity=0.047 Sum_probs=175.7
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~ 149 (361)
+++|+|.+|.+++.++..+++.++.++.|++.||+|.|+++.++.+++.+.++..+++ ++++.+++.|++.|++
T Consensus 63 ~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig- 141 (462)
T PRK15034 63 IGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA- 141 (462)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-
Confidence 3789999999999999999999999999999999999999999999999999999987 8999999999999998
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc-----c----------cCCCcchHHHHHhhHHHH
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE-----Q----------IKGGWGWRVSLALAAVPA 214 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~-----~----------~~~~~~wr~~~~~~~~~~ 214 (361)
+..++.....+++|+|+++||+++++.....++|..+++++...+. . ..+..+||...++.+++.
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 7788999999999999999999999996666666654444432211 0 011346888888877777
Q ss_pred HHHHHhccc-ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHH
Q 018042 215 SILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAI 293 (361)
Q Consensus 215 ~~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (361)
++..+..++ .++.|. ++ ...++..+.+|++. .+...+
T Consensus 222 iv~~i~~~~~~~~~~~----~~----------------------------------~~~~~~~~vlk~~~----~Wllsl 259 (462)
T PRK15034 222 AIATIAAWSGMNDIAS----SR----------------------------------ASIADQLPVLQRLH----LWLLSL 259 (462)
T ss_pred HHHHHHHHHhCCCccc----cc----------------------------------cCHHHHHHHhCCCc----hhHHHH
Confidence 666665555 333221 00 00112334445533 233444
Q ss_pred HHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 294 PFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.+++.+.++..+.+++|++.++ .++.........+..+...++.+++|+ ++||+|+|+++.++
T Consensus 260 ly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~--LADRiG~~~vl~~~ 322 (462)
T PRK15034 260 LYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGA--ISDKFGGVRVTLIN 322 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHH--HHHhcCchHHHHHH
Confidence 5566666777888899999865 344333333344456677788899999 69999999877654
No 41
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=1.2e-25 Score=205.07 Aligned_cols=252 Identities=12% Similarity=0.089 Sum_probs=180.3
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAAVNVYMLIFGRLLLG 146 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~r~l~G 146 (361)
.|++++++|++..+.++..+.+.+++.+++++.|++.||+|||+++..+.+++.++++++ ..+++++.++++|++.|
T Consensus 49 ~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G 128 (438)
T PRK10133 49 LPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIA 128 (438)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 566788889999999999999999999999999999999999999999999999999875 46889999999999999
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc-cC-------------CC---------cch
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ-IK-------------GG---------WGW 203 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~-------------~~---------~~w 203 (361)
+|.+...+....++.|+.|+++|...++..+....+|..+++.++..+.. .. ++ .+|
T Consensus 129 ~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w 208 (438)
T PRK10133 129 AGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSV 208 (438)
T ss_pred HHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHH
Confidence 99999999999999998877777778999999999999999988764431 10 00 256
Q ss_pred HHHHHhhH-HHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhccc
Q 018042 204 RVSLALAA-VPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQR 281 (361)
Q Consensus 204 r~~~~~~~-~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (361)
|+.|+... +..++..+.. ...||.+. +++ .+ +++....++.++++++
T Consensus 209 ~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~-~~--------------------------~~~~~~~~~~~~ll~~ 257 (438)
T PRK10133 209 QTPYMIIVAIVLLVALLIMLTKFPALQS----DNH-SD--------------------------AKQGSFSASLSRLARI 257 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCc----ccc-cc--------------------------ccccchhhhHHHHHhC
Confidence 66665433 3332322222 22454221 000 00 0000001123445554
Q ss_pred CchhHHHHHHHHHHHHHhcchhhhHHcHHHHH-H-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 282 KYRPQLLMAMAIPFFQQVTGINVIAFYAPLLF-R-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
+..+...+. .++..........|.+.++ + ..|.++.+++.....+.++.++|++++++ +.||+|+|+++..
T Consensus 258 ~~~~~~~l~----~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~--l~~r~g~~~~l~~ 330 (438)
T PRK10133 258 RHWRWAVLA----QFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTW--LISRFAPHKVLAA 330 (438)
T ss_pred chHHHHHHH----HHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCHHHHHHH
Confidence 433322222 2222233344555677664 4 45999999999999999999999999999 6999999987644
No 42
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.94 E-value=5.3e-26 Score=205.16 Aligned_cols=248 Identities=13% Similarity=0.108 Sum_probs=192.2
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+.+++|.+.++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.++..++++++.+++.|++.|++.
T Consensus 28 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 107 (385)
T TIGR00710 28 FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGA 107 (385)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcch
Confidence 45567778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+...+....++.|++|+++|+++.++.+....+|..+++.++..+.+. .+||+.+++.++..++..+.. ++.||++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 108 SAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW---LSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred hHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999998766543 479999988777766665544 4467754
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+.. + ++ +.+ +..+.+++.++++..+.... ..............+
T Consensus 185 ~~~----~-~~-------------~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 228 (385)
T TIGR00710 185 PYE----A-RI-------------QIS--------------TYFETFLLLLKSKMFWGYAL----IYGASFGGFFAFFSG 228 (385)
T ss_pred CCc----c-cC-------------CHH--------------HHHHHHHHHHcCchhHHHHH----HHHHHHHHHHHHHHc
Confidence 210 0 00 000 00112333444432222221 122222233455667
Q ss_pred HHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 309 APLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 309 ~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.|.+++ +.|.++.+.+.+.....++.+++.++.++ +.||+++|+.+..
T Consensus 229 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~~~~ 277 (385)
T TIGR00710 229 APFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGR--FIKKWGAKSLLRM 277 (385)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHH
Confidence 787775 67999999999999999999999999999 6999999876543
No 43
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.93 E-value=2.7e-26 Score=206.37 Aligned_cols=261 Identities=16% Similarity=0.159 Sum_probs=189.7
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+.+++|++.++.+++.+++.++..+++++.|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|++.
T Consensus 18 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 97 (379)
T TIGR00881 18 MPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQ 97 (379)
T ss_pred hHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 45667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHH-HHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCC
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAAN-FINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPET 227 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es 227 (361)
+...+...+++.|++|+++|++++++.+.+..+|..+++ .++..+.. ..+||+.|++.+++.++..+.. ++.||+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 98 GMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE---LYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred cccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh---cCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 999999999999999999999999999999999999998 45544433 3489999988877766654444 557776
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHH
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 307 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
|+....++. ++.+ ..+.+.++ ++++++.+..+...++.++++ .++...+..+...........
T Consensus 175 ~~~~~~~~~--~~~~------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (379)
T TIGR00881 175 PQSCGLPPA--EEMP------NEEPDGDA-----EKKEEELTKKQIFLQYVLLNK----VLWYISLGYVFVYVVRTGILD 237 (379)
T ss_pred ccccccCcc--ccCc------cccccccc-----ccccccccchHHHHHHHHhcc----hHHHHHHHHHHHHHHHHHHHH
Confidence 542111100 0000 00000000 000000001111233333332 222233333333344456777
Q ss_pred cHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhcc
Q 018042 308 YAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRW 352 (361)
Q Consensus 308 ~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~gr 352 (361)
+.|.+++ ..|++..+.+.......++.+++.++.++ +.||..+
T Consensus 238 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~~r~~~ 281 (379)
T TIGR00881 238 WSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGW--LSDKLFN 281 (379)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHH--HHHHHcC
Confidence 8888885 45999999999999999999999999999 6998643
No 44
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=1.6e-25 Score=200.64 Aligned_cols=257 Identities=14% Similarity=0.122 Sum_probs=180.5
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHhhhhh
Q 018042 73 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV-NVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~ 151 (361)
+++++|++..+.+++.+++.+++.+++++.|+++||+|||+.+.++.++..++.+++++++ +++.+++.|++.|++.+.
T Consensus 28 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 107 (366)
T TIGR00886 28 IKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS 107 (366)
T ss_pred HHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh
Confidence 6788899999999999999999999999999999999999999999999999999999999 999999999999998654
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhccc-------CCCcchHHHH-HhhHHHHHHHHHh-cc
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI-------KGGWGWRVSL-ALAAVPASILTLG-AL 222 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~wr~~~-~~~~~~~~~~~~~-~~ 222 (361)
.+....+++|++|+++|++++++......+|..+++.++..+... .++.+||+.+ +..++...+..+. ..
T Consensus 108 -~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 186 (366)
T TIGR00886 108 -FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFF 186 (366)
T ss_pred -hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHH
Confidence 566788999999999999999998877777776666665443321 1234799998 4434444443333 34
Q ss_pred cccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcch
Q 018042 223 FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 302 (361)
Q Consensus 223 ~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
+.+|+|+.. ++ +++.+. ..... . .+++...+.++.++++..+ ...+..+......
T Consensus 187 ~~~~~~~~~---~~-~~~~~~-----~~~~~-~-----------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 241 (366)
T TIGR00886 187 VGADTPPGK---PA-TGKLSF-----KGARW-S-----------VGTGALGDQLKVFRDRHTW----ILALLYSVTFGSF 241 (366)
T ss_pred hcccCCccc---cc-chhccc-----ccccc-c-----------ccchhHHHHHHHHhccchh----hHHHHHHHHHHHH
Confidence 466665311 00 000000 00000 0 0000001233344433222 2222233333344
Q ss_pred hhhHHcHHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 303 NVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 303 ~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
.....+.|.++++ .|+++.+++.+.....+.++++.++.++ ++||+|||+.+.
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~ 295 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGA--ISDRLGGARKLL 295 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccch--HHHhhccchhHH
Confidence 5667788888864 5999999998888888899999999999 699999987654
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.93 E-value=3.9e-25 Score=200.66 Aligned_cols=236 Identities=13% Similarity=0.156 Sum_probs=182.0
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|++.+++|.+.++.++..+++.+++.+++++.|+++||+|||++++.+.+++++++++++++++++.++++|+++|++.
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~ 118 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSI 118 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 56678888999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+...+....++.|++|+++|++++++......+|..++|+++..+.+. .+||+.|++.++..++..+.. +++||++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~---~gw~~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 119 CFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF---VHWKVLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 877777788899999999999999999999999999999998776643 489999999888777666544 4578875
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+. +++ .. +. +...+++++.+++ +.++...+..+...........+
T Consensus 196 ~~---~~~-~~-------------~~--------------~~~~~~~~~ll~~----~~~~~~~l~~~~~~~~~~~~~~~ 240 (413)
T PRK15403 196 KR---GAV-PF-------------SA--------------KSVLRDFRNVFRN----RLFLTGAATLSLSYIPMMSWVAV 240 (413)
T ss_pred cc---cCC-CC-------------Ch--------------HHHHHHHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 31 000 00 00 0001133444444 22322333333333444556667
Q ss_pred HHHHHHhc-CCCChhhHHHhhhhhhcccccccchhh
Q 018042 309 APLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMW 343 (361)
Q Consensus 309 ~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~~~ 343 (361)
.|.++++. |.+..+.++.......+.+++..+.+.
T Consensus 241 ~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~ 276 (413)
T PRK15403 241 SPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVAR 276 (413)
T ss_pred ChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888665 899999998887777777777666666
No 46
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=2e-25 Score=186.94 Aligned_cols=309 Identities=18% Similarity=0.152 Sum_probs=230.0
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHh
Q 018042 22 TAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFV 101 (361)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (361)
.+.+|...+....++.-+....-..+.+ .|.+++.+|.+..+..++....+.|..+++..
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i--------------------~~~l~~~w~~s~~q~~llt~~v~~gmllga~~ 132 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLI--------------------LPALDEVWGPSEGQAPLLTLSVFLGMLVGAMV 132 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHH--------------------HHHHHhhhchhhhhhhHHHHHHHhhhhhhhhh
Confidence 3556666666666655444433322222 55667788889999999999999999999999
Q ss_pred hHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHH
Q 018042 102 ASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIG 181 (361)
Q Consensus 102 ~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~ 181 (361)
+|.++|++|||+.+.......++...+.+.++|+..+++.|.+.|+|.|+ .|...++-.|.-|..+|...+-+. ..+.
T Consensus 133 w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~wa 210 (528)
T KOG0253|consen 133 WGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWA 210 (528)
T ss_pred hheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHH
Confidence 99999999999999999999999999999999999999999999999998 888888899999999999877777 8999
Q ss_pred HHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcch-------
Q 018042 182 IGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDV------- 254 (361)
Q Consensus 182 ~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 254 (361)
+|.+....++..+... .||||.......+..+.+...+.+|||||+...+++ +++|...++++...|..
T Consensus 211 ig~v~ea~law~vm~~---~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~-~~kAletL~kiArmNg~qlplgvl 286 (528)
T KOG0253|consen 211 IGQVFEALLAWGVMSN---FGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGD-DYKALETLHKIARMNGKQLPLGVL 286 (528)
T ss_pred HHHHHHHHHHHHHHHh---hhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCC-hHHHHHHHHHHHHhcCCCCCccee
Confidence 9999998887776643 489999988888877777777889999999999998 88888888887765521
Q ss_pred ------HHHHHHHHHH---HhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhc---CC----
Q 018042 255 ------EAEFDDLLKA---SSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTI---GL---- 318 (361)
Q Consensus 255 ------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~---- 318 (361)
++|.++.+.+ ....++.+.+..+++....|+..++...+.+...+. ++.........++.. +.
T Consensus 287 ~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~ 365 (528)
T KOG0253|consen 287 ESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRF 365 (528)
T ss_pred eeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhc
Confidence 1111111111 112233455677788888888877766665555444 334333333333321 11
Q ss_pred -------------CChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 319 -------------GRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 319 -------------s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+......-..+..+..++|.++.++ ++||+|||+++..+
T Consensus 366 ~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~--iverlGRKkTMal~ 417 (528)
T KOG0253|consen 366 LPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGV--IVERLGRKKTMALS 417 (528)
T ss_pred chhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHH--HHHHhcchhHHHHH
Confidence 1122222345567889999999999 59999999987544
No 47
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.93 E-value=2.9e-26 Score=216.72 Aligned_cols=270 Identities=14% Similarity=0.150 Sum_probs=194.9
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh----------------
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV---------------- 133 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~---------------- 133 (361)
.++++++|+++..+.|++.+.+.++++++.++.+++.||+|||+.+.+++++++++++++++.+
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence 6788999999999999999999999999999999999999999999999999999999987753
Q ss_pred -----------------------------------hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHH
Q 018042 134 -----------------------------------NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQF 178 (361)
Q Consensus 134 -----------------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~ 178 (361)
.+..++++|+++|+|.+..++...+++.|++|+++|+++++++..
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~ 215 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILES 215 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHH
Confidence 245677899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCC------------------c-chHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHH
Q 018042 179 SIGIGALAANFINYGTEQIKGG------------------W-GWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQ 239 (361)
Q Consensus 179 ~~~~g~~~~~~~~~~~~~~~~~------------------~-~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~ 239 (361)
+..+|..+|+++++.+.+...+ . .|+..|++.+++.++..+.++++|++.+....+.+ .+
T Consensus 216 ~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~-~~ 294 (633)
T TIGR00805 216 IAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN-VD 294 (633)
T ss_pred HHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc-hh
Confidence 9999999999998877653211 0 37777888887777766656666654211000000 00
Q ss_pred HHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCC
Q 018042 240 KAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGL 318 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~ 318 (361)
+.++ +......+.. .. +..+..++.....+.++++ +.++...+..+.....++.+..|+|.|++ ..|+
T Consensus 295 ~~~~--~~~~~~~~~~--~~---~~~~~~~~~~~~~~~Ll~n----~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~ 363 (633)
T TIGR00805 295 VHET--EKLEKSEDKS--RK---KNSDITKDFPKIIKRLLCN----PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGI 363 (633)
T ss_pred hhhh--hccccccccc--ch---hhhhhHHHHHHHHHHHHcC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0000 0000000000 00 0000001112234445554 44555555555566667888899999997 4699
Q ss_pred CChhhHHHhhhhhh-cccccccchhhHHHHhhhccc
Q 018042 319 GRLKVCQLSKWIEC-GGSIGFGRNMWVKWMNRVRWR 353 (361)
Q Consensus 319 s~~~~~~~~~~~~~-~~~~g~~~~~~~~l~dr~grr 353 (361)
++.+++.+.....+ +.++|.+++|+ ++||++++
T Consensus 364 s~~~ag~l~~~~~i~~~~vG~~l~G~--l~~r~~~~ 397 (633)
T TIGR00805 364 SSAEANFLIGVVNLPAAGLGYLIGGF--IMKKFKLN 397 (633)
T ss_pred cHHHHHHHhhhhhhhHHHHHHhhhhh--eeeeeccc
Confidence 99999988877665 56789999999 69999854
No 48
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.93 E-value=8.5e-26 Score=201.19 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=187.1
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 72 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
.+.+++|.+.++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..++++.+.++++|++.|++.+.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 101 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGF 101 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccc
Confidence 55788899999999999999999999999999999999999999999999999977766768888999999999999999
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhH
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNS 230 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~ 230 (361)
..+....++.|++|+++|++++++...+..+|.++++.++..+.+ +.+||+.|++.++..++..++. .+++++++.
T Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 178 (352)
T PF07690_consen 102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS---YFGWRWAFLISAILSLIAAILFILFLPEPPPP 178 (352)
T ss_dssp HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HCHHCCHHHHHHHHHHHHHHHHHCCC---STT
T ss_pred ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh---ccccccccccccchhhhhhhhHhhhhhhcccc
Confidence 999999999999999999999999999999999999999887663 3479999999988888876642 445444321
Q ss_pred HHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhccc-chhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcH
Q 018042 231 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINH-PFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 309 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (361)
...+++++++ +++++... .++..++++..+ ......+...........+.
T Consensus 179 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 229 (352)
T PF07690_consen 179 RERESPKESE-------------------------SKKPKPLKPGFKSLFKNPVLW----ILLIAFFLFFFVFSGFSFFL 229 (352)
T ss_dssp TT--SSTTTT---------------------------HHHCCCH-CTHHHHHHCCH----HHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccc-------------------------cccccccccccccccccchhh----hhhhhhhHHHHHHHHhhccc
Confidence 1111110000 00011111 244444433222 12222222223345578888
Q ss_pred HHHH-HhcCCC-ChhhHHHhhhhhhcccccccchhhHHHHhhhccceee
Q 018042 310 PLLF-RTIGLG-RLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 356 (361)
Q Consensus 310 ~~~~-~~~g~s-~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~ 356 (361)
|.++ +..|.+ ..+.+.......+.++++.++.++ +.||+++|+..
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~ 276 (352)
T PF07690_consen 230 PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGR--LSDRFGRRRRL 276 (352)
T ss_dssp HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCHHHH
T ss_pred chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCcHHHH
Confidence 8884 566888 688888888889999999999999 69999986543
No 49
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=1.5e-24 Score=203.09 Aligned_cols=268 Identities=18% Similarity=0.159 Sum_probs=186.3
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+.++.+.....+..+++++|.++|++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 44566888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhh
Q 018042 155 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQR 234 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~ 234 (361)
....+++|++++++|+.+.++ ......+..+++..+.++.. +||+.+++..+++++.++..++.||+|||+..+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-----~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-----DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 999999999999999999999 55555555555555554443 799999999999988877766677999999999
Q ss_pred CCCHHHHHHHHHHhhCCc----chHHHHHHH-HHHHhh--hhhcccchhhhcccC-chhHHHHHHHHHHHHHhcchhhhH
Q 018042 235 KSDHQKAKLMLQRVRGTN----DVEAEFDDL-LKASST--AKTINHPFKKIIQRK-YRPQLLMAMAIPFFQQVTGINVIA 306 (361)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 306 (361)
++ .+++.+..++..+.| +.++..+.. ..+.+. ..+.+..+.+.++.+ .+.+.+..... .+.. ....
T Consensus 265 g~-~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~-~~~~----~~~y 338 (521)
T KOG0255|consen 265 GR-IDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFI-WFVF----SLVY 338 (521)
T ss_pred Cc-hHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHH-HHHH----hHHH
Confidence 98 677777777665432 121211111 111111 111224566676655 33333333222 2211 1111
Q ss_pred HcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 307 FYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 307 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+-++......|.+.... ..........+....+. ..|+.|||.....+
T Consensus 339 ~gl~~~~~~lg~~~~~~---~~~~~~~~~p~~~~~~~--~~~~~gR~~~~~~~ 386 (521)
T KOG0255|consen 339 YGLSLNVSGLGGNIYLN---FTLSGLVELPAYFRNGL--LLPEFGRRPPLFLS 386 (521)
T ss_pred HhhhhhhhhcCchHHHH---HHHHHHHHhhHHHHHHH--HHHHhCcHHHHHHH
Confidence 12222223333332222 22222244455555555 58999999876543
No 50
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.93 E-value=9.8e-25 Score=196.36 Aligned_cols=251 Identities=16% Similarity=0.151 Sum_probs=192.7
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+.+++|++.++.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+.+.++++++.+++.|++.|++.
T Consensus 14 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~ 93 (377)
T PRK11102 14 LPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAA 93 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 45667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+...+....++.|++|+++|++++++.+....+|..+++.++..+.+. .+||+.|++.+++.++..+.. ++.||++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 94 AAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW---FSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999999999999999999999999999999999999997766543 479999988877776665544 5577764
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+.. ++ + +.+.++ ..+++++.++++.. + ...+..+....+......+
T Consensus 171 ~~~---~~--~-----------~~~~~~--------------~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~ 216 (377)
T PRK11102 171 PKE---RR--Q-----------PFHLRT--------------TIRNFASLFRHKRV---L-GYMLASGFSFAGMFSFLTA 216 (377)
T ss_pred ccc---cc--C-----------CCChHH--------------HHHHHHHHHcChHH---H-HHHHHHHHHHHHHHHHHHc
Confidence 210 00 0 000000 01123334444221 1 1222222333334455556
Q ss_pred HHHHH-HhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 309 APLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 309 ~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.|.++ +..|+++.+.+.+.....++.+++.++.++ +.||+|||+.+..+
T Consensus 217 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~~ 266 (377)
T PRK11102 217 GPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSR--FVRRVGALNMLRFG 266 (377)
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCHHHHHHHH
Confidence 66666 456999999999999999999999999999 69999999876543
No 51
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.93 E-value=6.4e-25 Score=201.14 Aligned_cols=255 Identities=17% Similarity=0.085 Sum_probs=180.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHhhhhhh
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----VNVYMLIFGRLLLGVGVGFA 152 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~ 152 (361)
+|++.++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.+.. ++++.+.+.|++.|++.+..
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~ 135 (438)
T TIGR00712 56 QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMG 135 (438)
T ss_pred cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcc
Confidence 48899999999999999999999999999999999999999999999988887664 46777888899999999999
Q ss_pred hhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHH
Q 018042 153 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSL 231 (361)
Q Consensus 153 ~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~ 231 (361)
++....++.|++|+++|++++++.+.+..+|..+++.+...... .+.+||+.|++.+++.++..+.. +++||+|+..
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 213 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA--WFNDWHAALYFPAICAIIVALFAFAMMRDTPQSC 213 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhc
Confidence 99899999999999999999999999999999888776543222 12489999999888777655444 5578877532
Q ss_pred HhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccch-hhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHH
Q 018042 232 IQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPF-KKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 310 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (361)
..++ .++.++ +. ..+.. ++.+.+.+.++.+ +..++++ .++...+..++.....+....|.|
T Consensus 214 ~~~~--~~~~~~---~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p 275 (438)
T TIGR00712 214 GLPP--IEEYRN---DY--PDDYN-------EKAEQELTAKEIFMQYVLPNK----LLWYIAIANVFVYLLRYGVLDWSP 275 (438)
T ss_pred CCCC--chhccc---cc--ccccc-------cccccccchHHHHHHHHccCc----hHHHHHHHHHHHHHHHHHHHHhHH
Confidence 1100 000000 00 00000 0000000000111 1233332 222222233333344456778999
Q ss_pred HHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccc
Q 018042 311 LLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR 353 (361)
Q Consensus 311 ~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr 353 (361)
.++++ .|+++.+++.......++++++.++.++ ++||++++
T Consensus 276 ~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~--l~dr~~~~ 317 (438)
T TIGR00712 276 TYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW--MSDKVFKG 317 (438)
T ss_pred HHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHH--HHHHhccC
Confidence 99976 5999999999999999999999999999 69999654
No 52
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.92 E-value=1.9e-24 Score=195.54 Aligned_cols=248 Identities=17% Similarity=0.149 Sum_probs=186.6
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+.+++|.+.++.++..+.+.++..+++++.|+++||+|||+.++.+.++..++.++...+++++.++++|++.|++.
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~ 105 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGA 105 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Confidence 45567778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+...+....++.|++|+++|+++.++.+....+|..++|.++..+.+ ..+||+.+++.++..++..+.. +++||++
T Consensus 106 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~---~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 106 GCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML---KFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999998776553 3489999998877766665544 4567764
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+.. +++ +++ . .+..++.++++..........+ ..........+
T Consensus 183 ~~~--~~~-~~~----------------~--------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 225 (392)
T PRK10473 183 PAR--APA-ASS----------------K--------------PRENSESLLNRFFLSRLVITTL----SVTVILTFVNT 225 (392)
T ss_pred Ccc--cCC-ccc----------------h--------------HHHHHHHHhCHHHHHHHHHHHH----HHHHHHHHHHh
Confidence 210 000 000 0 0011122222211111111111 11112234455
Q ss_pred HHHHH-HhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 309 APLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 309 ~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.|.++ ++.|++..+.+.......++.+++.++.++ +.||+|||+.+..+
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~--l~~r~g~~~~~~~~ 275 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPF--ALGIFKPRTLMLTS 275 (392)
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHH
Confidence 56666 456999988888888889999999999999 69999999876544
No 53
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=8.8e-25 Score=195.58 Aligned_cols=247 Identities=14% Similarity=0.035 Sum_probs=184.2
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHHHhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV-----NVYMLIFGRLLLGVGV 149 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~r~l~G~~~ 149 (361)
.+++.+..+.+++.+++.++..+++++.|+++||+|||++++.+.++..++.++..+.+ +++.+++.|++.|++.
T Consensus 27 ~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 106 (365)
T TIGR00900 27 LAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQ 106 (365)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 34467889999999999999999999999999999999999999999999888888887 9999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc--ccCC
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF--LPET 227 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~--~~es 227 (361)
+...+...+++.|++|+++|++.+++.+.+..+|.++++.++..+... .+||+.|++.++..++..+..++ .||+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (365)
T TIGR00900 107 AFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT---LGIKWAIWVDAVGFAISALLIVSVRIPEL 183 (365)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 999999999999999999999999999999999999999998777643 47999998877766555444333 3333
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhH-
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIA- 306 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 306 (361)
++. ++ ++.+ ++.. ++.++.+++.++++..+....... . .........
T Consensus 184 ~~~----~~--~~~~------------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~ 231 (365)
T TIGR00900 184 AAS----EI--QALS------------NAVL----------RDTREGIKFVLKNPLLRTLLLLAL---L-FNLVFAPAIV 231 (365)
T ss_pred CCc----cc--cccc------------hhHH----------HHHHhHHHHHHcCcHHHHHHHHHH---H-HHHHHHHHHH
Confidence 210 00 0000 0000 000112344444433322222211 1 112222333
Q ss_pred HcHHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 307 FYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 307 ~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.+.|.+.++ .|.+..+.+.......++.+++.++.++ +.||.+||+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~ 282 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGL--LGRYFKRMALMTG 282 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHH--HHHHhchhHHHHH
Confidence 678888875 6999999999999999999999999998 6999999887654
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.92 E-value=7.3e-24 Score=190.83 Aligned_cols=257 Identities=12% Similarity=0.075 Sum_probs=185.0
Q ss_pred HhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhH
Q 018042 34 MGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKP 113 (361)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~ 113 (361)
++.++.+.+.+..++. .|.+.+++|.|.++.|++.+.+.++..+++++.|+++||+|||+
T Consensus 13 ~~~~~~~~~~~~~~~~--------------------lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 13 CGLLLLTLAIAVLNTL--------------------VPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred HHHHHHHHhhhhHHHH--------------------HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4556666666665554 45556677999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhh
Q 018042 114 SVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYG 193 (361)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 193 (361)
++..+.++..++++++++++|++.++++|++.|++.+...+.....+.+..++++|+++++.+..+..+|..+++.++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999888888888899999999999999999999999999999776
Q ss_pred hcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcc
Q 018042 194 TEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTIN 272 (361)
Q Consensus 194 ~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (361)
+.... .|.. .+..+.......... ...+|++ .+ ++..
T Consensus 153 l~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~--------------------------------~~~~ 190 (381)
T PRK03633 153 VSTEL---MSVL-PWVTGLVLAAILPLLFTRILNQQ------AE--------------------------------NHDS 190 (381)
T ss_pred ccccc---cchH-HHHHHHHHHHHHHHHHhcccCCC------CC--------------------------------CCCC
Confidence 65421 1222 222222111111111 1122210 00 0001
Q ss_pred cchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhcc
Q 018042 273 HPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRW 352 (361)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~gr 352 (361)
.+.++.++++..+... ...+.....+.....+.|.++++.|.+....+.......++.+++.+..++ +.||+++
T Consensus 191 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~dr~~~ 264 (381)
T PRK03633 191 TSIWPMLKLRQARLGV----NGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGR--LADRFGR 264 (381)
T ss_pred CCHHHHHHhcchHHHH----HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHH--HHHHcCc
Confidence 1223334333222111 111111122334556789888888999988888888888999999999999 6999999
Q ss_pred ceeecc
Q 018042 353 RKLDIY 358 (361)
Q Consensus 353 r~~~~~ 358 (361)
|+.+..
T Consensus 265 ~~~l~~ 270 (381)
T PRK03633 265 LLVLRV 270 (381)
T ss_pred HHHHHH
Confidence 987643
No 55
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.92 E-value=4.2e-24 Score=193.32 Aligned_cols=267 Identities=12% Similarity=0.092 Sum_probs=192.7
Q ss_pred HHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 018042 31 MAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG 110 (361)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G 110 (361)
+++...+..|+..+..++. .|.+++++|++..+.+++.+.+.+++.+++++.|++.||+|
T Consensus 7 ~~~~~f~~~G~~~~~~~~l--------------------~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G 66 (410)
T TIGR00885 7 LITSLFALWGFANDITNPM--------------------VPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLS 66 (410)
T ss_pred HHHHHHHHHHHHHHhHHHH--------------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444557777777666555 56668888999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHH
Q 018042 111 RKPSVLMGGAAFLAGSALGGA---AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAA 187 (361)
Q Consensus 111 rr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~ 187 (361)
||++++.+.+++++++++... .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..++
T Consensus 67 ~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g 146 (410)
T TIGR00885 67 YKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIG 146 (410)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988644 46899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccC-----------------------CCcchHHHHHhhHHHHHHHHHhccc--ccCChhHHHhhCCCHHHHH
Q 018042 188 NFINYGTEQIK-----------------------GGWGWRVSLALAAVPASILTLGALF--LPETPNSLIQRKSDHQKAK 242 (361)
Q Consensus 188 ~~~~~~~~~~~-----------------------~~~~wr~~~~~~~~~~~~~~~~~~~--~~es~~~~~~~~~~~~~~~ 242 (361)
+.++..+.... +..+||+.|++.+++.++..+...+ .||.++ ++ ++
T Consensus 147 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~--~~-- 217 (410)
T TIGR00885 147 MVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----SD--AK-- 217 (410)
T ss_pred HHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cc--cc--
Confidence 99877664221 1136999998887766665544433 343210 00 00
Q ss_pred HHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhc--CCCC
Q 018042 243 LMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTI--GLGR 320 (361)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~ 320 (361)
+...+.+.++.++++.... ..+..++..........+++.+.++. +.+.
T Consensus 218 -------------------------~~~~~~~~~~~~~~~~~~~----~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~ 268 (410)
T TIGR00885 218 -------------------------QISFSASLSRLARIRHYRE----GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTA 268 (410)
T ss_pred -------------------------cccchhhHHHHHhChhHHH----HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCH
Confidence 0000112233444432222 22223333333445567788887654 4444
Q ss_pred hhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 321 LKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
..+.........+..+|++++++ +.||+++|+++.
T Consensus 269 ~~a~~~~~~~~~~~~vGR~~~~~--l~~r~~~~~~l~ 303 (410)
T TIGR00885 269 GFAANYNIGAMVIFFISRFIGTW--LISYLAAHKVLM 303 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHcCHHHHHH
Confidence 44455566666777899999999 699999988754
No 56
>PRK11043 putative transporter; Provisional
Probab=99.92 E-value=3.9e-24 Score=194.00 Aligned_cols=243 Identities=14% Similarity=0.092 Sum_probs=185.3
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|++++++|.+.++.++..+++.++..+++++.|+++||+|||+.+..+.++..++.++..++++++.+++.|++.|++.
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 108 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGV 108 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhh
Confidence 34557788999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPN 229 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 229 (361)
+...+....++.|++|+++|++..+.......+|..++|.++..+.. +.+||+.|++.+++.++..+..++++|+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T PRK11043 109 CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN---HFGWQAIFATLFAITLLLILPTLRLKPSKK 185 (401)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 88888888999999999999888888888888899999998776654 348999999888777776665555555432
Q ss_pred HHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcH
Q 018042 230 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 309 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (361)
. ++ +++ .+.++++.++++..+...... ......+.....+.
T Consensus 186 ~----~~-~~~------------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 226 (401)
T PRK11043 186 A----RK-QSQ------------------------------DALTFKQLLKSKTYLGNVLIF----AACSAAFFAWLTGS 226 (401)
T ss_pred c----cc-cch------------------------------HHHHHHHHHcChhHHHHHHHH----HHHHHHHHHHHHHh
Confidence 0 00 000 011233444332222111111 11122234456678
Q ss_pred HHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceee
Q 018042 310 PLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 356 (361)
Q Consensus 310 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~ 356 (361)
|.++++.|++..+.+.......++.++|.+..++ +.||+++|+..
T Consensus 227 p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~--l~~r~~~~~~~ 271 (401)
T PRK11043 227 PFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRA--ALQKWGGEQLL 271 (401)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCHHHHH
Confidence 8888888999988888777777888888888888 59999988753
No 57
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.4e-24 Score=187.31 Aligned_cols=321 Identities=20% Similarity=0.219 Sum_probs=221.2
Q ss_pred cchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHH
Q 018042 20 KITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVAS 99 (361)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (361)
...|+.....++...+.+.|+||...++.+. +.+...+....+. .-+.++...+.+..+.++|.++|+
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt---~il~~lY~~~~~~---------~g~~ps~i~~~Vn~~A~vGti~GQ 101 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVT---KILGYLYYHGDES---------GGHYPSGVLALVNAAALVGTIFGQ 101 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHH---HHHHHHhcCCCCC---------CCcCCchHHHHHHHHHHHHHHHHH
Confidence 3478899999999999999999999988773 3333333322211 124577788899999999999999
Q ss_pred HhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh-------hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccch
Q 018042 100 FVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV-------NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAI 172 (361)
Q Consensus 100 ~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~ 172 (361)
++.|++.||+|||+++...++++++++++++++. -.+++.+.|++.|+|.|+-+|...+..+|..-++.||..
T Consensus 102 l~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~ 181 (538)
T KOG0252|consen 102 LFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAF 181 (538)
T ss_pred HHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccce
Confidence 9999999999999999999999999999877742 235677779999999999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhc----ccCCC--------cchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHH
Q 018042 173 NNGFQFSIGIGALAANFINYGTE----QIKGG--------WGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQK 240 (361)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~----~~~~~--------~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~ 240 (361)
++...+..+.|...|.+++..+. ...+. .-||..+.+.+++.+.+....+.+|||+++.....++.+.
T Consensus 182 iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~ 261 (538)
T KOG0252|consen 182 IAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQ 261 (538)
T ss_pred eEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhh
Confidence 88776666666655555544443 22221 2599999999999988888888899999876443332333
Q ss_pred HHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhh-hcccCchh--HHHHHHHHHHHHHhcchhhhHHcHHHHHHhcC
Q 018042 241 AKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKK-IIQRKYRP--QLLMAMAIPFFQQVTGINVIAFYAPLLFRTIG 317 (361)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 317 (361)
+. ++..++.+.+.+.++. . +......++... ..+...++ +.++..+..+|..-..++....+...+++..|
T Consensus 262 a~---~d~~k~~~~~~~~~~~--~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig 335 (538)
T KOG0252|consen 262 AA---GDMKKVLSVDIEAEST--A-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIG 335 (538)
T ss_pred hh---hccccccccccchhhc--c-ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhc
Confidence 22 1111111111110000 0 111111111122 22222222 44556666777777778888889999998887
Q ss_pred CCChhhHH--------H-hhhhhhcccccccchhhHHHHhhhccceeecccC
Q 018042 318 LGRLKVCQ--------L-SKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 360 (361)
Q Consensus 318 ~s~~~~~~--------~-~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~~ 360 (361)
+.+.+... . ..+...+.++|..+... ++|++||++..+.|+
T Consensus 336 ~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~--~id~iGRk~iq~~GF 385 (538)
T KOG0252|consen 336 VIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVY--FIDIIGRKYIQLMGF 385 (538)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEE--EeehhhhHHHHHhhH
Confidence 76654433 2 23334455568888887 699999999877665
No 58
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.92 E-value=1.9e-23 Score=189.33 Aligned_cols=245 Identities=11% Similarity=0.058 Sum_probs=174.1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh---h-hhhHHHHHHHHHHHHhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---A-AVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~r~l~G~~~ 149 (361)
.+++|.+.++.++..+.+.++..++.++.|++.||+|||+++..+.++.+++++++. . .++++.+++.|++.|++.
T Consensus 40 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~ 119 (402)
T TIGR00897 40 LKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGY 119 (402)
T ss_pred HHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcch
Confidence 345688999999999999999999999999999999999999999999888876542 3 357888899999999998
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHH-HHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCC
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGA-LAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPET 227 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es 227 (361)
+...+.....+.|++|+++|++++++.+.+.++|. ++++.++..+.. ..||+..++.......+..+.. ++.+|.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (402)
T TIGR00897 120 PLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP---AFGEMNTLWSALAFVLTGGVIALFSNKDI 196 (402)
T ss_pred HHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccchHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 88888888889999999999999999999999996 578888655443 2465554444333322222222 334443
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHH
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 307 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
++. +++++++ + .++ .++.++.+++++. ++...+..+++.........
T Consensus 197 ~~~--~~~~~~~-------------~----~~~----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 243 (402)
T TIGR00897 197 FTP--QHMQTRE-------------K----FSE----------LGKAATILFTNPN----VLLGGMVRIINTIGLFGFAV 243 (402)
T ss_pred CCc--ccccCCc-------------c----hhh----------HHHHHHHHHcChh----HHHHHHHHHHHHHHHHHHHH
Confidence 210 0000000 0 000 0112333444432 22222333334445567788
Q ss_pred cHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceee
Q 018042 308 YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 356 (361)
Q Consensus 308 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~ 356 (361)
+.|.++++.|++..+.+.......+++.++.+..|+ ++||++||+..
T Consensus 244 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~--l~dr~~~~~~~ 290 (402)
T TIGR00897 244 FLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGI--VGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH--HHHhhcchhHH
Confidence 999999888999999888888888999999999999 69999988764
No 59
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=1.4e-23 Score=194.48 Aligned_cols=294 Identities=13% Similarity=0.126 Sum_probs=202.6
Q ss_pred HHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhch
Q 018042 32 AGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR 111 (361)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr 111 (361)
++++.+...++....++. .|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+||
T Consensus 15 ~~~~~~~~~~~~~~~~~~--------------------~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~ 74 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTA--------------------LPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGV 74 (471)
T ss_pred HHHHHHHHHHhHHHHHHH--------------------HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 334556666666655443 445566779999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHH
Q 018042 112 KPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFIN 191 (361)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~ 191 (361)
|++++.+.++..++.++++++++++.++++|++.|++.+...+....++.|++|+++|+++.++......+|..+++.++
T Consensus 75 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 75 RNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCChhHHHhhCCCHHHHHHHH-------H--HhhCCcc---hHHHH
Q 018042 192 YGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETPNSLIQRKSDHQKAKLML-------Q--RVRGTND---VEAEF 258 (361)
Q Consensus 192 ~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~~~~~~~~~~~~~~~~~~-------~--~~~~~~~---~~~~~ 258 (361)
+.+.+. .+||+.|.+......+..+... ..|+.+.. ..+ .+...... . ...+.+. .....
T Consensus 155 g~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~---~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (471)
T PRK10504 155 GLLVEY---ASWHWIFLINIPVGIIGAIATLMLMPNYTMQ---TRR-FDLSGFLLLAVGMATLTLALDGSKGLGLSPLAI 227 (471)
T ss_pred HHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCcccc---CCC-CChHHHHHHHHHHHHHHHHHhcCCcCCcchHHH
Confidence 777643 4899999987776665554443 34544311 111 11110000 0 0000000 00000
Q ss_pred HH-----------HHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhhHHH
Q 018042 259 DD-----------LLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQL 326 (361)
Q Consensus 259 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~ 326 (361)
.. ...++...++...+. ++++++.... .....++..........+.|+|++. .|.++...++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 302 (471)
T PRK10504 228 AGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSL----GLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLM 302 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 00 000001111111122 3444433222 2222223333345566778888874 69999999988
Q ss_pred hhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 327 SKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 327 ~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.....++.+++.++.++ +.||+|||+++..+
T Consensus 303 ~~~~~~~~~~~~~~~~~--l~~r~g~~~~~~~~ 333 (471)
T PRK10504 303 MIPMVLGSMGMKRIVVQ--VVNRFGYRRVLVAT 333 (471)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHcCchHHHHHH
Confidence 88888888888888888 69999999887644
No 60
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.91 E-value=1.8e-23 Score=186.49 Aligned_cols=243 Identities=19% Similarity=0.179 Sum_probs=181.0
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+++++|++.++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.. ..++.+.+++.|++.|++.
T Consensus 23 lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~ 101 (355)
T TIGR00896 23 LPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGI 101 (355)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHH
Confidence 566788899999999999999999999999999999999999999999998888888777 7789999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPN 229 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 229 (361)
+...+....++.|++| ++|++++++.+.+..+|..+++.+...+..... .+||+.|...++..++... .++||.++
T Consensus 102 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-~~w~~~f~~~~~~~~~~~~--~~~~~~~~ 177 (355)
T TIGR00896 102 AIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-GHWQQALAWWALPALLALL--AWIPQVRR 177 (355)
T ss_pred HHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHH--HHhhhhcc
Confidence 9888888888999986 689999999999999999999888666553321 2499988776654433322 22344321
Q ss_pred HHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcH
Q 018042 230 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 309 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (361)
. ++ + +++..+...++.++++. .+...+..+.....+.....|.
T Consensus 178 ~----~~-~----------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l 220 (355)
T TIGR00896 178 R----VA-A----------------------------NQTTTRLTPVRIWRSPL----AWQVTVFFGLQSGLYYSLIGWL 220 (355)
T ss_pred c----cC-C----------------------------CCCCCCCCCchhhcCHh----HHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0 00000112334444322 2222222333333445667789
Q ss_pred HHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhc-cceee
Q 018042 310 PLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVR-WRKLD 356 (361)
Q Consensus 310 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~g-rr~~~ 356 (361)
|.++++.|++..+.+...+...++.+++.++.++ +.||++ ||+.+
T Consensus 221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~--l~dr~~~~~~~~ 266 (355)
T TIGR00896 221 PAILISHGASAATAGSLLALMQLAQAASALLIPA--LARRVKDQRGIV 266 (355)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHH--HHhhhccchHHH
Confidence 9999888999999999999999999999999999 699995 45443
No 61
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.91 E-value=1.2e-23 Score=190.10 Aligned_cols=243 Identities=21% Similarity=0.227 Sum_probs=176.0
Q ss_pred CchhHHHHHHH-----HHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHHHH
Q 018042 80 DSQLLTSFTSS-----LYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVY--------MLIFGRLLLG 146 (361)
Q Consensus 80 ~~~~~~~~~~~-----~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G 146 (361)
++++.+...+. ..++..+++++.|+++||+|||+++..+.++..++.+++++++++. .++++|+++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 107 (394)
T TIGR00883 28 GDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQG 107 (394)
T ss_pred CChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHH
Confidence 44445544432 3334457899999999999999999999999999999999998875 4788899999
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhccc-----CCCcchHHHHHhhHHHHHHHHHhc
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI-----KGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
++.+...+....++.|++|+++|++..+....+..+|.++++.++..+... .+..+||+.|++.+++.++.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 187 (394)
T TIGR00883 108 FSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLR 187 (394)
T ss_pred hhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998886655431 134689999988777665555444
Q ss_pred ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcc
Q 018042 222 LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTG 301 (361)
Q Consensus 222 ~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (361)
...||++++..+++ ++++.+.+.++.++++. ++.+. .....+.....
T Consensus 188 ~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~ 234 (394)
T TIGR00883 188 RNLEETPVFEKAQE-------------------------------KHKKKRGPIRETLTKHR-KPFLL-GLGLVIATTTT 234 (394)
T ss_pred HhcCCChhHHHHHh-------------------------------ccccccCCHHHHHHhch-HHHHH-HHHHHHHHHHH
Confidence 55677653211100 00111223444443322 11222 22333333344
Q ss_pred hhhhHHcHHHHH-HhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 302 INVIAFYAPLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 302 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
......+.|.++ ++.|.+..+.+.......++..++.++.++ ++||+|||+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~--l~dr~g~~~~~~ 289 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGA--LSDRIGRRPVLI 289 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHH--HHHHhchHHHHH
Confidence 556777888888 456899999998888888999999999999 699999998654
No 62
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.91 E-value=3.2e-24 Score=184.25 Aligned_cols=248 Identities=15% Similarity=0.165 Sum_probs=195.1
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhh---HHHHHHHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN---VYMLIFGRLLLG 146 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~r~l~G 146 (361)
.+.+++++|+|++|.+++.++..+...+.-++.|.+.||+|.|++...++++..+-++..+++.+ ++++++++++.|
T Consensus 37 ~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G 116 (417)
T COG2223 37 GVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLG 116 (417)
T ss_pred HhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHh
Confidence 55667999999999999999999999999999999999999999999999999999999998754 459999999999
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-cc
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LP 225 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~ 225 (361)
++ |..+.....+++++||+|++|.+++++. ..++|..+...++..+........||....+..+..++..+..++ ..
T Consensus 117 ~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 117 LA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred cc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 97 5567788899999999999999999998 777787766666555443321012999988888877776666654 66
Q ss_pred CChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcc-cchhhhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 226 ETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTIN-HPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 226 es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
|.|......+. .. .+++.++++ +..+.+.+.++..+.++..
T Consensus 195 d~p~~r~~~~~----------------------------------~~~~~~~~v~~~----~~~W~lsllY~~tFG~Fvg 236 (417)
T COG2223 195 DVPEHRASVKP----------------------------------QLPAQLKAVFSN----KDTWLLSLLYFATFGGFVG 236 (417)
T ss_pred CChhhhccccc----------------------------------cchhHHHHHhcC----cchHHHHHHHHHHHHHHHH
Confidence 66532111110 00 123334333 3334456667777788899
Q ss_pred hHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 305 IAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 305 ~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+..++|.|++ ++|.++.+++.....+.+.+.+.+..+|+ ++||+|.+|++.+.
T Consensus 237 fs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~--LsDR~Gg~rv~~~~ 290 (417)
T COG2223 237 FSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGW--LSDRIGGRRVTLAV 290 (417)
T ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccch--hhhhccchhHHHHH
Confidence 9999999996 56999999999999999999999999999 69999988876543
No 63
>PRK12382 putative transporter; Provisional
Probab=99.91 E-value=1e-22 Score=184.24 Aligned_cols=236 Identities=15% Similarity=0.114 Sum_probs=165.3
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh---h-----hhhHHHHHHHHHH
Q 018042 73 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---A-----AVNVYMLIFGRLL 144 (361)
Q Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~-----~~~~~~~~~~r~l 144 (361)
+++++|+|.++.+++.+++.++..+++++.|+++||+|||++++.+.+...++.+... . .++++.++++|++
T Consensus 42 l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 121 (392)
T PRK12382 42 VHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLI 121 (392)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHH
Confidence 4677899999999999999999999999999999999999999998887776554321 1 3578899999999
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
.|++.+...+...+++.|++|+|+|++++++.+.+...|..++++++..+.. ..+||+.+.+..+..++........
T Consensus 122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 198 (392)
T PRK12382 122 LGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS---HFGFAALALTTMVLPLLAWAFNGTV 198 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh---ccChHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998888889999999999999999999999999999999999776654 3479987766544433333222223
Q ss_pred cCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 225 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 225 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
||.++. +++ +.+.++.++...+.. .. ..+ .......
T Consensus 199 ~~~~~~---~~~-----------------------------------~~~~~~~~~~~~~~~-~~-~~l----~~~~~~~ 234 (392)
T PRK12382 199 RKVPAH---AGE-----------------------------------RPSLWSVVGLIWKPG-LG-LAL----QGVGFAV 234 (392)
T ss_pred cCCCCC---ccc-----------------------------------CchHHHHHHHHHHhH-HH-HHH----HHHHHhH
Confidence 332110 000 001111111100111 11 111 1122334
Q ss_pred hHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 305 IAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 305 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
...+.|.++++.|++. .+.......++.+++.+..++ +.||+|+|+.+..+
T Consensus 235 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~~ 285 (392)
T PRK12382 235 IGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGW--MPDRFGGVKVAIVS 285 (392)
T ss_pred HHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHH--HHHhcCCCeehHHH
Confidence 5667777777766653 445555667777888888998 69999999887644
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.91 E-value=2.9e-23 Score=187.32 Aligned_cols=247 Identities=13% Similarity=0.071 Sum_probs=178.4
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
.++++.+..+.+++.+.+.+++.+..++.|+++||+|||++++.+.++..++++.+.++.+. ++.|+++|++.+...
T Consensus 30 ~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~ 106 (393)
T PRK11195 30 LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYS 106 (393)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 34557788899999999999999999999999999999999999999999988887777664 678999999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHh
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQ 233 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~ 233 (361)
|...+++.|++|+++|++++++.+....+|.++||.+++.+... .|+..+.+.+...++..+..+.+||+|+....
T Consensus 107 pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~----~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 182 (393)
T PRK11195 107 PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP----HAEAALAVCALIYLLAALFNLFIPRLGARRPG 182 (393)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 99999999999999999999999999999999999999887753 37777766655544444444567886532110
Q ss_pred hCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHH
Q 018042 234 RKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLF 313 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (361)
++. +... ...+. ++.++.+++++..+...+...+.++. .....+..|.++
T Consensus 183 ~~~---~~~~-------------~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 232 (393)
T PRK11195 183 QSW---NPIA-------------LLRDF----------FHACRVLWRDKLGRFSLAGTTLFWGA----GATLRFLVLAWA 232 (393)
T ss_pred cCC---CHHH-------------HHHHH----------HHHHHHHHhCchhHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 000 0000 00000 01123445444433333222222221 223344555555
Q ss_pred H-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 314 R-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 314 ~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+ ..|.++.+.+.......++.++|.+..++ +.||.++|+.+..+
T Consensus 233 ~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~--l~~~~~~~~~~~~g 277 (393)
T PRK11195 233 PVALGITLNQPAYLQAVVAIGIAVGAGAAAR--LVTLETVLRVLPAG 277 (393)
T ss_pred HHHcCCChhHHHHHHHHHHHHHHHHHHHHHH--HhcCCcccchHHHH
Confidence 4 35999999999999999999999999998 58888887765443
No 65
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.91 E-value=2.2e-23 Score=188.99 Aligned_cols=235 Identities=20% Similarity=0.150 Sum_probs=167.3
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh--------hhHHHHHHHHHH
Q 018042 73 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--------VNVYMLIFGRLL 144 (361)
Q Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~r~l 144 (361)
+++++|.|..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.+.+.++ .+++.+++.|++
T Consensus 42 i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 121 (399)
T PRK05122 42 VHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLL 121 (399)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHH
Confidence 466779999999999999999999999999999999999999999999888776655443 256788999999
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
.|++.+...+....++.|++|+++|++++++...+..+|.++++.++..+.. +.+||+.+++..+..++..+.....
T Consensus 122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 198 (399)
T PRK05122 122 LGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH---WGGLAGLGLLIMLLALLGLLLARPR 198 (399)
T ss_pred HHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH---cccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999776654 3479998877666554433333223
Q ss_pred cCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 225 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 225 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
|++++ +++ + +.++++.+++..... ....+ ....+..
T Consensus 199 ~~~~~----~~~---~-------------------------------~~~~~~~~~~~~~~~--~~~~~----~~~~~~~ 234 (399)
T PRK05122 199 PAVPP----VKG---E-------------------------------RLPFRRVLGRVWPYG--MGLAL----ASIGFGT 234 (399)
T ss_pred CCCCC----CCc---c-------------------------------chhHHHHHHHHHHHH--HHHHH----HHHHHHH
Confidence 33221 000 0 001111111100001 11111 1122334
Q ss_pred hHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 305 IAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 305 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
...+.+.++++.|.+ +.+.......++.+++.++.++ +.||+++|+.+..
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~--l~~r~~~~~~~~~ 284 (399)
T PRK05122 235 IATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGN--LINRLGGLRVAIV 284 (399)
T ss_pred HHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHH--HHHHhccHHHHHH
Confidence 556777777666663 3455566777888889899998 6999999887654
No 66
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.90 E-value=8.5e-23 Score=184.84 Aligned_cols=240 Identities=15% Similarity=0.205 Sum_probs=180.3
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.|.+.+++|++..+.++..+.+.++..+++++.|+++||+|||+++..+.++..++.++..++++++.+++.|++.|++.
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 110 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGT 110 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhh
Confidence 45556778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
+...+....+..|.+++++|+++.+....+..+|..++|.++..+.+ ..+||+.|++.++..++..+.. ++.||++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~---~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 111 GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT---LFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 88888888899999999999999999999999999999999876654 3489999998877666554433 5577764
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+.. ++ +++ .++++++.++++..+..... .+...........+
T Consensus 188 ~~~---~~-~~~------------------------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 229 (394)
T PRK11652 188 PAD---AR-RTR------------------------------VLASYRTLLSNRRFNCYLLM----LIGTLAGIAVFEAC 229 (394)
T ss_pred ccc---cc-hhH------------------------------HHHHHHHHHcChHHHHHHHH----HHHHHHHHHHHHHh
Confidence 210 00 000 01123334443322222221 11122223344555
Q ss_pred HHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhcc
Q 018042 309 APLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRW 352 (361)
Q Consensus 309 ~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~gr 352 (361)
.+.++++ .|.+..+.+.......++.+++..+.++ +.||.++
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~--l~~~~~~ 272 (394)
T PRK11652 230 SGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGR--PNKRFST 272 (394)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 6667765 6999888888887777888888888887 5888774
No 67
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=2e-23 Score=191.81 Aligned_cols=260 Identities=13% Similarity=0.074 Sum_probs=179.5
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH-HHHHHhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFG-RLLLGVG 148 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-r~l~G~~ 148 (361)
.|++.+++|++.++.+++.+.+.++..++.++.|+++||+|||++++.+.++..+++++++++++++.+++. |++.|++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~ 121 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLG 121 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 455677889999999999999999999999999999999999999999999999999999999999988754 7999999
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc-cCC
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL-PET 227 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~-~es 227 (361)
.+...+....++.++++ ++|+++.++.+.+..+|..++++++..+... .+||+.|++.+++.++..+..++. ++.
T Consensus 122 ~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~---~gwr~~f~~~~~~~~~~~v~~~~~~~~~ 197 (455)
T TIGR00892 122 LAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES---FGWRGSFLILGGLLLHCCVCGALMRPVG 197 (455)
T ss_pred chhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 98877777888899996 7899999999999999999998887666543 489999999888776655444333 322
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHH
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 307 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
+... ..+ .++. +.....+..+.. +.....++..+....+.++++ .++......+....+......
T Consensus 198 ~~~~--~~~-~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~ 262 (455)
T TIGR00892 198 PSQR--VSK-SKSK----EGLPPDGSTKKL----SKKSTAEKINRFLDFSLFTHR----GFLVYLSGNVIMFLGFFAPII 262 (455)
T ss_pred cccc--ccc-cccc----ccCCCCCccccc----cccchhhhhhhhcchHHhcCc----hHHHHHHHHHHHHHHccchHH
Confidence 2100 000 0000 000000000000 000000000000001233332 222222333333334455667
Q ss_pred cHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhh
Q 018042 308 YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRV 350 (361)
Q Consensus 308 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~ 350 (361)
++|.+.++.|++..+++.+.....++.+++.++.++ +.||.
T Consensus 263 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~d~~ 303 (455)
T TIGR00892 263 FLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGL--IAGLK 303 (455)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc
Confidence 888888888999999999999999999999999998 58873
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.90 E-value=1.3e-22 Score=184.44 Aligned_cols=151 Identities=17% Similarity=0.095 Sum_probs=126.4
Q ss_pred cccccCCchh-----HHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 018042 74 SNYCKFDSQL-----LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 148 (361)
Q Consensus 74 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 148 (361)
.+++|++..+ .+++.++..++..+++++.|+++||+|||+++..+.++..++.++..+.++++.+++.|++.|++
T Consensus 41 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (408)
T PRK09874 41 VEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL 120 (408)
T ss_pred HHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 3344666443 48889999999999999999999999999999999999999999998999999999999999998
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCC
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPET 227 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es 227 (361)
.+ ..+....++.|++|+++|++++++...+..+|.++++.++..+... .+||+.|++.++..++..+.. ++.||+
T Consensus 121 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 121 GG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADS---YGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 65 4677788899999999999999999999999999999998766543 479999998887766655544 446665
Q ss_pred h
Q 018042 228 P 228 (361)
Q Consensus 228 ~ 228 (361)
+
T Consensus 197 ~ 197 (408)
T PRK09874 197 F 197 (408)
T ss_pred c
Confidence 3
No 69
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=1.6e-22 Score=181.90 Aligned_cols=242 Identities=15% Similarity=0.130 Sum_probs=173.8
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHH-HHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 73 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLM-GGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
+++++|.+..+.+++.+.+.+...+.+++.|+++||+|||+.++. +.++..++.++.+++++++.+++.|++.|.+.+.
T Consensus 24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 103 (375)
T TIGR00899 24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAST 103 (375)
T ss_pred HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhh
Confidence 467789999999999999999999999999999999999887654 5666677778888999999999999999988888
Q ss_pred hhhHHHHHHHhcCCcccccch--hhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 152 ANQSVPLYLSEMAPARYRGAI--NNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
..+....+..|+.|++.|+.. .+....+.++|.++++.++..+.+. .+||+.|++.+++.++..+.. +++||+|
T Consensus 104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 104 ANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG---FGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred hHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 888888889999887777654 5677778889999999997776543 489999999888776666555 4478876
Q ss_pred hHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHc
Q 018042 229 NSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFY 308 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
+...++.+ +.+.++.++++..+.......+.+ ........+
T Consensus 181 ~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 221 (375)
T TIGR00899 181 RGAPGALT-----------------------------------RLEVRGLLASRDTRLLFVACTLMW----GCNILYIIN 221 (375)
T ss_pred cCcccccC-----------------------------------cchhhhhhcCcchHHHHHHHHHHH----HHHHHHHhh
Confidence 32100000 001112233322222222111111 122334556
Q ss_pred HHHHH-HhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 309 APLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 309 ~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.|.++ ++.|.++.+.+..........+++.++.++ +.||+|||+.+..
T Consensus 222 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~--l~~r~g~~~~~~~ 270 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGY--LIKRFGKRRLMLL 270 (375)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhcchhHHHH
Confidence 67776 456999888888777766667778888888 6999999987654
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.89 E-value=1.6e-22 Score=179.80 Aligned_cols=222 Identities=26% Similarity=0.391 Sum_probs=188.3
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 72 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
...+++|.+.++.++..+...++..+++++.|+++||+|||+.+..+.++..++.+...+.++++.++++|++.|++.+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 103 (352)
T cd06174 24 LLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGA 103 (352)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHccccc
Confidence 33455678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHH
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSL 231 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~ 231 (361)
..+...+++.|++|+|+|++.+++......+|..+++.++..+.+. .+||+.+++.++..++..+...+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------ 174 (352)
T cd06174 104 LYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES---LGWRWLFLILAILGLLLALLLLFLL------ 174 (352)
T ss_pred ccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 9999999999999999999999999999999999999998777653 3699999988877776665544332
Q ss_pred HhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHH
Q 018042 232 IQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPL 311 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (361)
+.++...+..+...........+.|.
T Consensus 175 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T cd06174 175 ------------------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPL 200 (352)
T ss_pred ------------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 11222333344444556777888888
Q ss_pred HHHhc-CCCChhhHHHhhhhhhcccccccchhhHHHHhhhccce-eecc
Q 018042 312 LFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK-LDIY 358 (361)
Q Consensus 312 ~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~-~~~~ 358 (361)
+.++. |.+..+.+.......++..++.++.++ +.||++||+ .+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~ 247 (352)
T cd06174 201 YLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL--LSDRLGRRRLLLLI 247 (352)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhhHHHHH
Confidence 88766 999999999999999999999999999 699999998 6543
No 71
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.89 E-value=3.5e-22 Score=178.36 Aligned_cols=254 Identities=13% Similarity=0.057 Sum_probs=178.5
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-----chhHHH-HHHHHHHHHHHHHhhhh---hhHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-----GRKPSV-LMGGAAFLAGSALGGAA---VNVYMLIF 140 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grr~~l-~~~~~~~~~~~~~~~~~---~~~~~~~~ 140 (361)
.|.+.+|+|+|.++.++..+. .+...+ .+++|+++||+ |||+.+ +.+.++.++.....++. .+.+.+..
T Consensus 11 ~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~ 88 (356)
T TIGR00901 11 LPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAG 88 (356)
T ss_pred HHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHH
Confidence 455677889999999999755 444444 89999999998 898874 56777777776666666 46666777
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCC-----CcchHHHHHhhHHHHH
Q 018042 141 GRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-----GWGWRVSLALAAVPAS 215 (361)
Q Consensus 141 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~wr~~~~~~~~~~~ 215 (361)
..++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.++..+....+ .++||..|++.++..+
T Consensus 89 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l 168 (356)
T TIGR00901 89 LAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLIL 168 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHH
Confidence 78888888888899999999999999999999999999999999999999876654432 2249999999888777
Q ss_pred HHHHhccc-ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHH
Q 018042 216 ILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 294 (361)
Q Consensus 216 ~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (361)
+..+..++ .||+++. +++ +++ +. ++.+.+++++++++..++.+.....
T Consensus 169 ~~~~~~~~~~~e~~~~---~~~-~~~----------------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~- 217 (356)
T TIGR00901 169 PGLLVTLFLAKEPQED---ASV-PKP----------------LT----------QAVLKPIREFFQRKNMIQALLLLLL- 217 (356)
T ss_pred HHHHHHHHhccCCCcc---ccc-chh----------------HH----------HHHHHHHHHHHHhcCchHHHHHHHH-
Confidence 66555544 5664320 000 000 00 0001133444444332233332222
Q ss_pred HHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhh-hcccccccchhhHHHHhhhccceeecc
Q 018042 295 FFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIE-CGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.+......+....+.|.++++.|++..+.+....... ++.++|.+++++ +.||+|||+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~--l~~r~g~~~~l~~ 280 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGI--IMQPLNILYALLL 280 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHH--HHhhhhHHHHHHH
Confidence 2223344456677888888778999999887776655 577899999999 6999998877554
No 72
>PRK10054 putative transporter; Provisional
Probab=99.88 E-value=7.4e-22 Score=178.29 Aligned_cols=243 Identities=12% Similarity=0.016 Sum_probs=173.5
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhh
Q 018042 73 ISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 152 (361)
Q Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~ 152 (361)
+++++|++..+.++..+.+.++..+++++.|+++||+|||++++.+.++..++.++.+++++++.++++|.+.|.+.+..
T Consensus 34 l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 113 (395)
T PRK10054 34 LSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVF 113 (395)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 35677999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHH
Q 018042 153 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSL 231 (361)
Q Consensus 153 ~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~ 231 (361)
.+....+..|.+|+++|+++.++.....++|.+++|+++..+.. .+|+..|++.++..++..+.. +++||+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~----~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~- 188 (395)
T PRK10054 114 STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM----QSINLPFWLAAICSAFPLVFIQIWVQRSEKA- 188 (395)
T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hccCcHHHHHHHHHHHHHHHHHHHHhccccc-
Confidence 88899999999999999999999999999999999999887653 379999998877766655444 335554310
Q ss_pred HhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHH
Q 018042 232 IQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPL 311 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (361)
+++ ++ + + ..+.++.++++..+.......+..+. ......+.+.
T Consensus 189 --~~~--~~---------------~---------~-----~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~ 231 (395)
T PRK10054 189 --IAT--ET---------------G---------S-----VWSPSVLLQDKALLWFTCSGFLASFV----SGAFASCISQ 231 (395)
T ss_pred --ccc--ch---------------h---------h-----hhhhhhhccCceehHHHHHHHHHHHH----HHHhhhhHHH
Confidence 000 00 0 0 00113344443332222222221111 2222334444
Q ss_pred HH---HhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 312 LF---RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 312 ~~---~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+. ++.+.+....+.......+..+......+. +.||.++|+.+..+
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~l~~~ 280 (395)
T PRK10054 232 YVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGR--RLNAANIRPLMTAG 280 (395)
T ss_pred HHHHhcccchHHHHHHHHHHhhhhheeeehhHHHH--HHccCCchhHHHHH
Confidence 44 233555556666666666666666666666 59999988876544
No 73
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.88 E-value=1.1e-21 Score=181.54 Aligned_cols=244 Identities=16% Similarity=0.156 Sum_probs=171.0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-----chhHH-HHHHHHHHHHHHHHhhhh---hhHHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-----GRKPS-VLMGGAAFLAGSALGGAA---VNVYMLIFGRLL 144 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l 144 (361)
.++.|.+.++++.+ +.....+ ++.+++|+++||+ |||+. +..+.+..+++....++. ++++.+.+.+++
T Consensus 39 l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l 116 (491)
T PRK11010 39 MTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVV 116 (491)
T ss_pred HHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 44447788888886 3333333 6899999999999 99985 556777777777666664 478888889999
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+... ..|||..|++.++..++..+..++.
T Consensus 117 ~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~--~~GWr~~f~i~a~l~ll~~l~~~~~ 194 (491)
T PRK11010 117 IAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR--YLGWQGMYWLMAALLIPCIIATLLA 194 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999887766541 2489999999888777666655567
Q ss_pred cCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 225 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 225 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
||+++.. ++ +++ .+ +....++++.++++..+....... ... .....
T Consensus 195 ~e~~~~~---~~-~~~-------------~~-------------~~~~~~l~~~~~~~~~~~~ll~~~---l~~-~~~~~ 240 (491)
T PRK11010 195 PEPTDTI---PV-PKT-------------LE-------------QAVVAPLRDFFGRNNAWLILLLIV---LYK-LGDAF 240 (491)
T ss_pred CCCcccc---cc-ccc-------------hh-------------hhHHHHHHHHHcCcCHHHHHHHHH---HHH-HHHHH
Confidence 8864310 00 000 00 000113445554433222222221 111 22233
Q ss_pred hHHcHHHHH-HhcCCCChhhHHHhh-hhhhcccccccchhhHHHHhhhccceeec
Q 018042 305 IAFYAPLLF-RTIGLGRLKVCQLSK-WIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 305 ~~~~~~~~~-~~~g~s~~~~~~~~~-~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
...+.+.++ ++.|++..+.+.+.. ...++.++|.+++|+ ++||+|+|+.+.
T Consensus 241 ~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~--L~dr~g~~~~l~ 293 (491)
T PRK11010 241 AMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGI--LMQRLSLFRALM 293 (491)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhHHHHHH
Confidence 344555565 567999999999874 556789999999999 699999887654
No 74
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.88 E-value=4.1e-21 Score=169.71 Aligned_cols=160 Identities=14% Similarity=0.138 Sum_probs=138.9
Q ss_pred cccccccccCCchh-HHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 018042 70 DTKISNYCKFDSQL-LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 148 (361)
Q Consensus 70 ~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 148 (361)
.|.+.+++|++.++ .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGva 128 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVT 128 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667899999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHh---hHHHHHHHHHhccccc
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLAL---AAVPASILTLGALFLP 225 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~---~~~~~~~~~~~~~~~~ 225 (361)
+|... ....++..|+|+++|+++.++...+..+|.+++++++..+. ..|||+.+.+ ......+.+++.+++|
T Consensus 129 EA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~----s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 129 MAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV----TLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999 99999999999999999999999999999999999987733 3478876543 3333334445557788
Q ss_pred CChhHHHhh
Q 018042 226 ETPNSLIQR 234 (361)
Q Consensus 226 es~~~~~~~ 234 (361)
..++.+.-+
T Consensus 204 ~~~~sl~f~ 212 (511)
T TIGR00806 204 RPKRSLFFN 212 (511)
T ss_pred CCchhhhhc
Confidence 666655443
No 75
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.86 E-value=1e-21 Score=179.07 Aligned_cols=244 Identities=12% Similarity=0.060 Sum_probs=177.5
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~ 149 (361)
++++.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|++.|++.
T Consensus 45 ~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 124 (417)
T PRK10489 45 QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFG 124 (417)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 334568889999999999999999999999999999999998888777776655432 567888999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPN 229 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 229 (361)
+...+....++.|++|+++|+++.++......+|..+++.+++.+... .+|++.+++.++..++..+..+.+||+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 201 (417)
T PRK10489 125 SLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA---GGVAWNYGLAAAGTFITLLPLLRLPALPP 201 (417)
T ss_pred HHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 888888999999999999999999999999999999999998776543 37999998877776666655566777542
Q ss_pred HHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcH
Q 018042 230 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 309 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (361)
.. ++ +++ ..+ +.++.++..++++......+.. .... . ......+.
T Consensus 202 ~~---~~-~~~----------------~~~----------~~~~~~~~~~~~~~~~~~~~~~---~~~~-~-~~~~~~~~ 246 (417)
T PRK10489 202 PP---QP-REH----------------PLR----------SLLAGFRFLLASPVVGGIALLG---GLLT-M-ASAVRVLY 246 (417)
T ss_pred CC---cc-ccc----------------chH----------HHHHHHHHHHcChHHHHHHHHH---HHHH-H-HHhHHHhh
Confidence 10 00 000 000 0011223333332222222111 1111 1 23456678
Q ss_pred HHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 310 PLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 310 ~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
|.++++ .|.+....+.+.....++.+++.++.++ +.||.++++.+..
T Consensus 247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~--l~~~~~~~~~l~~ 294 (417)
T PRK10489 247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGW--LAHSARPGLLMLL 294 (417)
T ss_pred HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHH--hhhccCcchHHHH
Confidence 888877 6999999999999999999999999998 5888666655443
No 76
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.86 E-value=7.2e-21 Score=172.17 Aligned_cols=149 Identities=16% Similarity=0.172 Sum_probs=132.8
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
++++|++..+.|+..+...+...+.+++.|+++||+|||+++..+.++..++.+...++++++.+++.|++.|++.+...
T Consensus 38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~ 117 (400)
T PRK11646 38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFD 117 (400)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 55678899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccC
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPE 226 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~e 226 (361)
+...+++.|++|+++|++++++......+|..++|.+++.+.. .+||+.|++.++..++..+.. ++.||
T Consensus 118 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~----~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 118 PPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ----YDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999887762 489999998877666554433 44555
No 77
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.85 E-value=3.6e-20 Score=167.48 Aligned_cols=240 Identities=15% Similarity=0.097 Sum_probs=161.8
Q ss_pred ccccccCCchhHHHHHHHHH-HHHHHHHHhhHHHHHhhchhHHHH-HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Q 018042 73 ISNYCKFDSQLLTSFTSSLY-VAGLVASFVASSVTRAFGRKPSVL-MGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 73 i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 150 (361)
+.+++|.+.++.|++.+... .+..++.++.++ +||+|||+.++ .+.++..+++.+.+++++++.+++.+.+.|...+
T Consensus 42 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 120 (393)
T PRK15011 42 LTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGS 120 (393)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 46778999999999977654 466666666666 99999998754 5566666778888889999988766655555556
Q ss_pred hhhhHHHHHHHhcCCccccc--chhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCC
Q 018042 151 FANQSVPLYLSEMAPARYRG--AINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPET 227 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es 227 (361)
...+....+..|+.+++.|. ...++.+.+.++|.+++|+++..+.+. .|||..|++.++..++..+.. +++||.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~---~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 197 (393)
T PRK15011 121 TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG---FSFTVMYLSAAVAFIVCGVMVWLFLPSM 197 (393)
T ss_pred hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---cChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 77888888888888766553 445778888999999999998877643 489999998887776665554 457876
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHH
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 307 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
++. +++ +. + + .+..+ ++ ++..+........ ..........
T Consensus 198 ~~~---~~~---~~----------~--------------~----~~~~~---~~--~~~~~~~~~~~~~-~~~~~~~~~~ 237 (393)
T PRK15011 198 RKE---LPL---AT----------G--------------T----LEAPR---RN--RRDTLLLFVICTL-MWGTNSLYII 237 (393)
T ss_pred CCC---Ccc---cc----------c--------------c----ccccc---cc--cccHHHHHHHHHH-HHHHHHHHHH
Confidence 421 000 00 0 0 00000 01 0111111111111 1222344556
Q ss_pred cHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 308 YAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 308 ~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
+.|.+++ +.|+++.+.+.+.....++.+++.++.|+ ++||+|||+.+..
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~--l~dr~g~~~~~~~ 287 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGY--FAKRLGKRFLMRV 287 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhChHHHHHH
Confidence 7888875 56999888888877777777888999999 6999999986543
No 78
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=1.9e-20 Score=158.16 Aligned_cols=150 Identities=20% Similarity=0.222 Sum_probs=122.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHH
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 157 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 157 (361)
+.+....|.+.+.+.++..++++.+|.++||||||++++++++..++...+.+++.|+..+++.|++.|+..|- ..+..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHH
Confidence 34667789999999999999999999999999999999999999999999999999997777779999998765 45778
Q ss_pred HHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhccc---CCCcchHHHHHhhHHHHHH-HHHhcccccCCh
Q 018042 158 LYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI---KGGWGWRVSLALAAVPASI-LTLGALFLPETP 228 (361)
Q Consensus 158 ~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~wr~~~~~~~~~~~~-~~~~~~~~~es~ 228 (361)
++++|.+++|+|+++++.+...+++|.++||.+++++.+. ...+..-.+-++..+.... .....+++||+-
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999999999999999999999999999872 2211122222233333333 334457799983
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.85 E-value=3.7e-20 Score=167.90 Aligned_cols=245 Identities=15% Similarity=0.123 Sum_probs=171.3
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-----chhH-HHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-----GRKP-SVLMGGAAFLAGSALGGAA---VNVYMLIFGRLL 144 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l 144 (361)
-++.|++.+++|++..+... .+..+++|+++||+ |||+ .++.+.++.+++....++. .+++.+++..++
T Consensus 26 l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~ 103 (402)
T PRK11902 26 MTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVL 103 (402)
T ss_pred HHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 34458999999999777665 58899999999999 8875 6788888887777777766 457778888888
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.++..+.... .+||..|++.++..++..+..++.
T Consensus 104 ~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~--~gw~~~f~i~a~~~l~~~l~~~~~ 181 (402)
T PRK11902 104 VAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV--LGWGNTYLLMAGLMLAGALTTLWA 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888999999999999999999999999999999999999988876655421 389999999887766655555567
Q ss_pred cCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 225 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 225 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
||+++. +++ +++.+ ++.+++++++++++..+..+....+...... ..
T Consensus 182 ~e~~~~---~~~-~~~~~--------------------------~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~---~~ 228 (402)
T PRK11902 182 PEPEVP---ARP-PRSLG--------------------------EAVVGPLRDFFSRRGAWALLLLIVLYKLGDA---FA 228 (402)
T ss_pred CCCccc---ccc-cchhH--------------------------HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHH---HH
Confidence 776431 000 00000 0001234556666544443332222222111 11
Q ss_pred hHHcHHHHHHhcCCCChhhHHHhhhh-hhcccccccchhhHHHHhhhccceeec
Q 018042 305 IAFYAPLLFRTIGLGRLKVCQLSKWI-ECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 305 ~~~~~~~~~~~~g~s~~~~~~~~~~~-~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
.....+.+.++.|+++.+.+.+.... .++.++|.+++++ +.||+++|+.+.
T Consensus 229 ~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~--l~~r~g~~~~l~ 280 (402)
T PRK11902 229 GSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGT--LMVRLGLYRSLM 280 (402)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHH--HHHHHhHHHHHH
Confidence 12233444456799998888887554 4567899999999 699999887654
No 80
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.84 E-value=3.5e-19 Score=150.20 Aligned_cols=241 Identities=18% Similarity=0.152 Sum_probs=197.0
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.+++++|+|+|.+..|.++++..+...+.+++..++.+|+|.++.+..++++..++.++-... +.+.++.+..+.|.|.
T Consensus 35 L~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gI 113 (395)
T COG2807 35 LDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGI 113 (395)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhH
Confidence 667799999999999999999999999999999999999999999999999999999999887 7788899999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPN 229 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 229 (361)
+......++.+.+.||+ +-+..+++|....++|..+++.+...+.+.. .+||....+-+.++++.++.++.-...++
T Consensus 114 av~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~aL~~WAl~allAl~~WlPq~~r~~ 190 (395)
T COG2807 114 AVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRGALGFWALLALLALLIWLPQALREQ 190 (395)
T ss_pred HHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 99999999999999984 5689999999999999999888876666554 38999999988888877776653211110
Q ss_pred HHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcH
Q 018042 230 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 309 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (361)
. ...+....+..+++++ +..+...+++..+...+|....|+
T Consensus 191 -~----------------------------------~~~~~~~~~~~~vw~~----~~aW~vtLfmGlqS~~~Y~~~~WL 231 (395)
T COG2807 191 -A----------------------------------ASIATKLVSVRKVWRS----PLAWQVTLFMGLQSLLYYIVIGWL 231 (395)
T ss_pred -c----------------------------------cccccccccccccccC----chhHHHHHHHHhhHHHHHHHHHHH
Confidence 0 0000111122344555 444455566666777789999999
Q ss_pred HHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhcccee
Q 018042 310 PLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKL 355 (361)
Q Consensus 310 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~ 355 (361)
|.++.+.|+|..+++.+.++..+..++..+...+ +.+|...++.
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~--la~R~~n~r~ 275 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPL--LARRSKNQRP 275 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHH--HHHHhcccch
Confidence 9999999999999999999999999999999999 5887654443
No 81
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.84 E-value=3.5e-20 Score=166.90 Aligned_cols=244 Identities=9% Similarity=0.052 Sum_probs=170.0
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHH----HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 018042 72 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSV----LMGGAAFLAGSALGGAAVNVYMLIFGRLLLGV 147 (361)
Q Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 147 (361)
...+++|+|.++++++.+++.+...+++++.|+++||+||+... ..+..+..+ .....+++++.+++.|.+.|.
T Consensus 29 ~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~ 106 (382)
T TIGR00902 29 AWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFAL 106 (382)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHH
Confidence 33556799999999999999999999999999999999985433 222222222 233467899999999999999
Q ss_pred hhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 018042 148 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 227 (361)
Q Consensus 148 ~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 227 (361)
+.+...+...++..|+ +++|++..+......++|.++++++++.+.+. .|||..|++......+..+ .+.++|+
T Consensus 107 ~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~---~g~~~~f~~~~~~~~~~~~-~~~~~~~ 180 (382)
T TIGR00902 107 FFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM---FDEQNILAILTAGLAFMLI-GFLIKPT 180 (382)
T ss_pred HHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHHH-HHHcCCC
Confidence 9888888888887664 47789999999999999999999997777643 4899998876554333222 2333333
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHH
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 307 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
++. +++ .++ ++.+..++.++.++++. ++...+..+...........
T Consensus 181 ~~~---~~~-~~~--------------------------~~~~~~~~~~~~l~~~~----~~~~l~~~~l~~~~~~~~~~ 226 (382)
T TIGR00902 181 IPP---KDA-IPE--------------------------DESQGDSAFIALLKNPM----NLRFLAAVCLIQGAHAAYYG 226 (382)
T ss_pred CCC---Ccc-ccc--------------------------cccccchhHHHHHcChH----HHHHHHHHHHHHHHHHHHHH
Confidence 210 000 000 00001123445555532 22222223333344566677
Q ss_pred cHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 308 YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 308 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+.|.++++.|.+....+.......++.+++....++ +.||+|+|+++.++
T Consensus 227 ~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~--l~~r~g~~~~l~~~ 276 (382)
T TIGR00902 227 FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNK--LFQNCSARDLLLIS 276 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHH--HHhhCCHHHHHHHH
Confidence 888888889999999999988888888999888888 69999999887654
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=3.6e-20 Score=189.43 Aligned_cols=248 Identities=13% Similarity=-0.026 Sum_probs=171.6
Q ss_pred chhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHhhhhhhhhHHH
Q 018042 81 SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---AAVNVYMLIFGRLLLGVGVGFANQSVP 157 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~~~~~~~ 157 (361)
....+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. ..++++.++++|++.|++.+...+...
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 125 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKY 125 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHH
Confidence 45578899999999999999999999999999999998877666555443 457899999999999999999999999
Q ss_pred HHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccC------CCcchHHHHHhhHHHHH-HHHHhcccccCChhH
Q 018042 158 LYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK------GGWGWRVSLALAAVPAS-ILTLGALFLPETPNS 230 (361)
Q Consensus 158 ~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~wr~~~~~~~~~~~-~~~~~~~~~~es~~~ 230 (361)
+++.|++|+++|++++++...+..+|.++++++++.+.... ...+|++.+.+..+... +..+..+++||+|..
T Consensus 126 ~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (1146)
T PRK08633 126 GIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAA 205 (1146)
T ss_pred hhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 99999999999999999999999999999999988776530 01134444444333333 333344557877642
Q ss_pred HHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHH
Q 018042 231 LIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAP 310 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (361)
...+.+ ++. .. ..+.....++.+++++..+..++... ...........+.|
T Consensus 206 ~~~~~~--~~~---------~~--------------~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 256 (1146)
T PRK08633 206 APEVFD--KKK---------YL--------------FPKLLWRNLKLLRSDRVLWLAIIGLS----YFWFISQLAQANFP 256 (1146)
T ss_pred Cccccc--ccc---------cc--------------cHHHHHHHHHHHhcCcHHHHHHHHHH----HHHHHHHHHHHhhH
Confidence 111000 000 00 00000113444444433222222222 22222344556677
Q ss_pred HHHH-hcCCCCh-hhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 311 LLFR-TIGLGRL-KVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 311 ~~~~-~~g~s~~-~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.++. ..|++.. ..+++.....++.++|.++.++ +.||+++++.+.++
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~--l~~r~~~~~~~~~~ 305 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGR--LSGRHIELGLVPLG 305 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHH--HhCCceEccchhHH
Confidence 7774 5699988 8899999999999999999999 69999988776543
No 83
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.83 E-value=7.6e-20 Score=164.75 Aligned_cols=242 Identities=10% Similarity=0.050 Sum_probs=167.1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchh----HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK----PSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
.+++|.|.+++|+..+++.++..+++++.|+++||+||| +.+.+..++. .......+++++.+++.|++.|++.
T Consensus 31 l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~ 108 (382)
T PRK11128 31 LKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFF 108 (382)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHH
Confidence 455688999999999999999999999999999999984 3333222222 2223344688999999999999998
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPN 229 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~ 229 (361)
+...+...++..++ .++|++..+.......+|..++|++++.+... .|||..|++.++..++..+...+.||.++
T Consensus 109 ~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 183 (382)
T PRK11128 109 SPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW---FGEQAILWILTAGVASMLLGQLLRPTIMP 183 (382)
T ss_pred cccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 88888888887776 35688888888888899999999998877643 47999998777655444443344454321
Q ss_pred HHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcH
Q 018042 230 SLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYA 309 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (361)
+++ +++ +.++...+++++++++..+.......+. .........+.
T Consensus 184 ----~~~-~~~--------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~l~----~~~~~~~~~~~ 228 (382)
T PRK11128 184 ----QGE-SRQ--------------------------QESAGWPAWKALLKEPTVWRFLLCVSLL----QGSHAAYYGFS 228 (382)
T ss_pred ----ccc-ccc--------------------------ccccccchHHHHHcChhHHHHHHHHHHH----HHHhHhHHHHH
Confidence 000 000 0000123456666654333322222221 12233455666
Q ss_pred HHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 310 PLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 310 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
|.++++.|.+..+.+.+.....++.++..++.++ +.||+++|+.+..+
T Consensus 229 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~--l~~r~~~~~~l~~~ 276 (382)
T PRK11128 229 AIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNR--LFRRWSARDLLLLS 276 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHH--HHHHCCHHHHHHHH
Confidence 7777788999988898888888888888888888 69999999876544
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.82 E-value=1.2e-19 Score=185.13 Aligned_cols=240 Identities=14% Similarity=-0.006 Sum_probs=170.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHH---HHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHH
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLM---GGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPL 158 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 158 (361)
...++..+++.+.+.+.++++|+++||+|||+++.. ..++..+..+.....++++.++++|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457788889999999999999999999999997533 22333333333334589999999999999999999999999
Q ss_pred HHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCH
Q 018042 159 YLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDH 238 (361)
Q Consensus 159 ~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~ 238 (361)
++.|++|+++|++++++.+.+..+|.++||++++.+... .+|++.|+..++..++..++.+++|+++... .+. .
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~ 205 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS---GNFVILVALLMGIAVLGWLASLFIPKTGNAA--PDL-K 205 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhCCCCCCCC--CCC-e
Confidence 999999999999999999999999999999999887754 4799998555555555555556677654210 000 0
Q ss_pred HHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh-cC
Q 018042 239 QKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT-IG 317 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 317 (361)
.+. . ... .....++.+.+++..+.. .+..+........+..+.|.|+++ .|
T Consensus 206 ~~~-----------~---~~~----------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~g 257 (1140)
T PRK06814 206 IDR-----------N---IIR----------STITLLKYAKADKRIWLA----ILGISWFWLVGAVVLSQLPLLAKETLG 257 (1140)
T ss_pred ecc-----------c---hHH----------HHHHHHHHHhcCchHHHH----HHHHHHHHHHHHHHHHHhHHHHHHHcC
Confidence 000 0 000 001134444444332222 222222222334566788888865 59
Q ss_pred CCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 318 LGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 318 ~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
.+....+.+.+...++.++|.++.++ ++++..+++.+.
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~~~g~--l~~~~~~~~~~~ 295 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSFLASK--LSEGRITLLYVP 295 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHH--HhCCceeeeeeh
Confidence 99999999999999999999999999 587776665543
No 85
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.82 E-value=4e-19 Score=152.08 Aligned_cols=249 Identities=14% Similarity=0.136 Sum_probs=194.3
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---AAVNVYMLIFGRLLLG 146 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G 146 (361)
.|.+++.|+++..+.+++...++.|+.+.+++.+++.+|+|+|+.++.|+.++++++.+.. ...++..++++-++.|
T Consensus 36 ip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila 115 (422)
T COG0738 36 IPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILA 115 (422)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 6666778899999999999999999999999999999999999999999999999999985 5578899999999999
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccC----------------CCcchHHHHHhh
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK----------------GGWGWRVSLALA 210 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~~wr~~~~~~ 210 (361)
.|.+...+....+++...++++-...+++.+..+++|.+++|+++..+.... ....|+++|...
T Consensus 116 ~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~ 195 (422)
T COG0738 116 SGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLIL 195 (422)
T ss_pred hhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHH
Confidence 9999999999999999999988888999999999999999999987666410 012578888777
Q ss_pred HHHHHHHHHhccc--ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHH
Q 018042 211 AVPASILTLGALF--LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLL 288 (361)
Q Consensus 211 ~~~~~~~~~~~~~--~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (361)
+...++..+.... .||.+....+ ..+..+....+.+++++ +
T Consensus 196 ~~~lvll~v~~~~~k~p~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~~----~ 238 (422)
T COG0738 196 AGLLVLLAVLILLSKLPDLQVAAPS---------------------------------LGASGSAGLSSLFQNKH----L 238 (422)
T ss_pred HHHHHHHHHHHHhccCCcCCccccc---------------------------------ccccccchHHHHHhChH----H
Confidence 7666665555433 4443210000 00000113445555533 3
Q ss_pred HHHHHHHHHHhcchhhhHHcHHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 289 MAMAIPFFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
....+..++..........|++.|+.+ .|.+..++....+.+..+.++|++++.+ +..|+...|.+.
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~--lm~~~~~~k~La 306 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSA--LMSRIKPEKYLA 306 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCHHHHHH
Confidence 334444555555667888999999987 6999999999999999999999999998 577887766543
No 86
>PTZ00207 hypothetical protein; Provisional
Probab=99.81 E-value=6.7e-19 Score=162.79 Aligned_cols=155 Identities=15% Similarity=0.088 Sum_probs=125.7
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA------VNVYMLIFGRL 143 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~r~ 143 (361)
.|++++++|++.++.+++.++. ....+.+++.|++.||+|||+++.++.+++.+++++++++ ++++.+++.|+
T Consensus 50 s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~ 128 (591)
T PTZ00207 50 SGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNG 128 (591)
T ss_pred HHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHH
Confidence 4556788899999999988764 3455678889999999999999999999999999999987 68999999999
Q ss_pred HHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHH-HHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-
Q 018042 144 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALA-ANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA- 221 (361)
Q Consensus 144 l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~- 221 (361)
+.|+|.+...+.....+.++|| ++||++.++...+.++|.++ +++...++. .+|+..|++.++..++..+..
T Consensus 129 l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-----~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 129 LMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-----DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 78999999999999999975 444444433 258888887777776665544
Q ss_pred ccc--cCChhHH
Q 018042 222 LFL--PETPNSL 231 (361)
Q Consensus 222 ~~~--~es~~~~ 231 (361)
+++ |+.+++.
T Consensus 203 ~~vr~p~~~~~~ 214 (591)
T PTZ00207 203 VFMRLPPFHLTG 214 (591)
T ss_pred hheeCCcchhhc
Confidence 333 4445543
No 87
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.81 E-value=8e-20 Score=155.38 Aligned_cols=238 Identities=15% Similarity=0.096 Sum_probs=186.1
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
++.+-+++++|++.+...+...+.+++.|.+.||+|+|..+++|++++...++++++..+++++++.|.++|+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 45566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCccc-ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHh
Q 018042 155 SVPLYLSEMAPARY-RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQ 233 (361)
Q Consensus 155 ~~~~~~~e~~~~~~-R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~ 233 (361)
...++++|.+|+++ |++++|+.-.+.++|..+||+.++.+.+.. |.+..|.+.+++.++-..+.+++-|..+
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~---Gk~aPFlVL~~v~Lld~~L~l~vi~p~~---- 251 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA---GKSAPFLVLAIVLLLDGALQLLVIEPTE---- 251 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc---CCcCcHHHHHHHHHHHHHHHHheeCccc----
Confidence 99999999999876 799999999999999999999999888664 7999999999998888777766433210
Q ss_pred hCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHH
Q 018042 234 RKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLF 313 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (361)
.+ +++..+..+++++++++. +........++ ......+...++.++
T Consensus 252 ~~------------------------------~~~~~~~~~~~~Ll~dP~---I~~~agai~~~-n~~lafLePtlslwm 297 (464)
T KOG3764|consen 252 MD------------------------------PDSTEQGTPMWSLLMDPY---ILLIAGAITFS-NSSLAFLEPTLSLWM 297 (464)
T ss_pred cC------------------------------ccccccCccHHHHHhCch---Hhhhhcchhhc-cchHHHhCcccHHHH
Confidence 00 011222445666665532 22222222222 223344455555655
Q ss_pred -HhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhcccee
Q 018042 314 -RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKL 355 (361)
Q Consensus 314 -~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~ 355 (361)
++...+..+.+..+....+.-.+|.-+.|. +.||++..++
T Consensus 298 ~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~--la~k~~~~~w 338 (464)
T KOG3764|consen 298 LETMFTPGWEVGLAFLPASLSYAIGTNLFGK--LADKYPHLRW 338 (464)
T ss_pred HHhccCCCcceeeeecccccchhccCchHHH--HHHhcCchhH
Confidence 455655558888888888899999999998 6999984333
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.81 E-value=6.6e-19 Score=159.53 Aligned_cols=248 Identities=12% Similarity=0.007 Sum_probs=159.4
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh---hh-----hhHHHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---AA-----VNVYMLIFGRLLL 145 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~~-----~~~~~~~~~r~l~ 145 (361)
++++|.+..+.+++.+.+.++..+++++.|+++||+|||+.++.+++...++..... +. ......++.+++.
T Consensus 30 ~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (396)
T TIGR00882 30 HDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYL 109 (396)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 455688999999999999999999999999999999999999887766655443221 11 1233456678888
Q ss_pred HhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-c
Q 018042 146 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-L 224 (361)
Q Consensus 146 G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~ 224 (361)
|++.+...+....+..|..+ +++...+......++|..+++.+++.+.. .+||+.|++.++..++..+..++ .
T Consensus 110 g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~~~~ 183 (396)
T TIGR00882 110 GFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS----IDPQIVFWLGSGFALILMLLLMFAK 183 (396)
T ss_pred HHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc----cCchHHHHHHHHHHHHHHHHHHHhC
Confidence 98888888888887777533 34556677777778899999988776643 37999999888777776655544 4
Q ss_pred cCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 225 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 225 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
||+|+. ++.++. .+ .++++.+.++.++.++++..+...+ . .+.....+..
T Consensus 184 ~~~~~~--------~~~~~~----~~--------------~~~~~~~~~~~~~~l~~~~~~~~~l---~-~~~~~~~~~~ 233 (396)
T TIGR00882 184 PKAPSS--------ATVANA----LG--------------ANASAFSLKLALELFRQRKFWMFVL---Y-VVGVACVYDV 233 (396)
T ss_pred CCCchh--------hhhhcc----cc--------------cccCCCCHHHHHHHHcCCcHHHHHH---H-HHHHHHHHHH
Confidence 444321 000000 00 0000111123455555543222221 1 1111122233
Q ss_pred hHHcHHHHHHhc----CCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 305 IAFYAPLLFRTI----GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 305 ~~~~~~~~~~~~----g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
...+.+.++++. +.+....+.......+...++.+..++ +.||+|||+.+.++
T Consensus 234 ~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~--l~~r~g~~~~l~~~ 290 (396)
T TIGR00882 234 FDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPL--IINRIGAKNALLIA 290 (396)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccchhHHHH
Confidence 444566666543 445556677777777777888888888 69999999987654
No 89
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.81 E-value=5.5e-20 Score=168.52 Aligned_cols=274 Identities=16% Similarity=0.207 Sum_probs=196.2
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH-HHHHHhhh
Q 018042 71 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFG-RLLLGVGV 149 (361)
Q Consensus 71 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-r~l~G~~~ 149 (361)
+.++++++.+.++++|+.++......+.+++.+.+.||+|.|.+.+.|.++..++.++.++++++|++++. -++.|+|.
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~ 149 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGL 149 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccc
Confidence 44577778899999999999999999999999999999999999999999999999999999999999887 79999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc-cCCh
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL-PETP 228 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~-~es~ 228 (361)
|..+.+....+..+|+ |+|+.+.++...+.++|.++-|.+... ..+..|||+.+++.+.+.+-.++..... |.++
T Consensus 150 ~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~---l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKY---LLSKYGWRGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred hhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHH---HHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999999999998776 679999999999999999988888444 4455689999988777765555544433 3222
Q ss_pred hHHHhhCCCHHHHHHHH-------HHhhCC-c--chH---HHHHHHHHHHhhhh--hcccch----hhhcccCchhHHHH
Q 018042 229 NSLIQRKSDHQKAKLML-------QRVRGT-N--DVE---AEFDDLLKASSTAK--TINHPF----KKIIQRKYRPQLLM 289 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~-------~~~~~~-~--~~~---~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~ 289 (361)
+......++.+...... ++.... + ... ...++.++..++.. ..+... .+++++ +.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~----~~fl 301 (509)
T KOG2504|consen 226 PKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD----PKFL 301 (509)
T ss_pred CCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcC----chHH
Confidence 11000000000000000 000000 0 000 00000000000000 001111 233333 6677
Q ss_pred HHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccce
Q 018042 290 AMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRK 354 (361)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~ 354 (361)
...+...+...++.....++|.+.++.|++..++..+.++.++..++|+++.|+ +.|+...++
T Consensus 302 ~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~--laD~~~~~~ 364 (509)
T KOG2504|consen 302 LLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGL--LADKPGIRA 364 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhh--hcCccccch
Confidence 777777777788888999999999999999999999999999999999999999 599987443
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.80 E-value=2.7e-18 Score=157.86 Aligned_cols=143 Identities=22% Similarity=0.262 Sum_probs=117.2
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
.+|+| +.+...|+.+.+.++..++.++.|.++|.+|||++++.+.++..+|+++++.++|...++++..+.|+|.|...
T Consensus 71 ~~diG-~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~ 149 (599)
T PF06609_consen 71 NADIG-GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE 149 (599)
T ss_pred HHhcC-CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH
Confidence 33334 34667889999999999999999999999999999999999999999999999999999999999999987766
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
.....++|..|.|+|+....+......+....++.++..+. .+.+|||.|++.++...+.++..
T Consensus 150 -~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~---~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 150 -LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA---AHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred -HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc---cCCCcchHHHHHHHHHHHHHHHH
Confidence 45566899999999988777766665555556667755443 23589999999888777665544
No 91
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.79 E-value=2.2e-18 Score=157.31 Aligned_cols=247 Identities=14% Similarity=0.035 Sum_probs=146.5
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh---hhh-----hHHHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---AAV-----NVYMLIFGRLLL 145 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~~~-----~~~~~~~~r~l~ 145 (361)
++++|++..+.|++.+++.++..+++++.|+++||+|||++++++..+..++..... .++ .....++++++.
T Consensus 38 ~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (420)
T PRK09528 38 HDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYL 117 (420)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455789999999999999999999999999999999999999887666554433211 111 111122333444
Q ss_pred HhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc-
Q 018042 146 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL- 224 (361)
Q Consensus 146 G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~- 224 (361)
|.+.....+....+..+ . .++|++.++.......+|..+++++++.+.. .+|++.|++.++..++..+..++.
T Consensus 118 ~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 118 GFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN----INPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred hhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh----cCchHhHHHHHHHHHHHHHHHhccc
Confidence 43333333333333322 2 2456778888888889999999999877653 279999988887776666555554
Q ss_pred cCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 225 PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 225 ~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
+|.++....+++ ++ + ++++...+..++.++++..+...+....... ....
T Consensus 192 ~~~~~~~~~~~~--~~----------~--------------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~----~~~~ 241 (420)
T PRK09528 192 PDAPSTAKVANA--LG----------A--------------NASAVSLKDALALLKLPKFWFLVLYVIGVAC----FYDV 241 (420)
T ss_pred ccccchhhhccc--hh----------c--------------ccccccHHHHHHHccCCCeEeehHHHHHHHH----HHHH
Confidence 343221000000 00 0 0000001122334444332222221111111 1122
Q ss_pred hHHcHHHHHH----hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 305 IAFYAPLLFR----TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 305 ~~~~~~~~~~----~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
...+.|.++. +.+.+....+.......++..++.++.++ +.||+|+|+.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~--l~dr~g~~~~~~~ 297 (420)
T PRK09528 242 FDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPF--IINRIGAKNALLL 297 (420)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCcchhhHH
Confidence 3334455443 23566667778888888888899999999 6999999987654
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.78 E-value=3.4e-19 Score=163.60 Aligned_cols=251 Identities=12% Similarity=0.124 Sum_probs=166.0
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh----hchh-HHHHHHHHHHHHHHHHhhhhhh------HHHHHH
Q 018042 72 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRK-PSVLMGGAAFLAGSALGGAAVN------VYMLIF 140 (361)
Q Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~~~~ 140 (361)
.+.+++|++..+.|++.++..+..++..|+.|+++|| +||| +.++.+.....++.+++...++ ...+++
T Consensus 25 ~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 104 (437)
T TIGR00792 25 FYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYI 104 (437)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 3466779999999999999999999999999999998 6874 4667788888888777766553 456667
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhcC-CcccccchhhHHHHHHHHHHHHHHHHHhhhcc-c---CCCcchHHHHHhhHHHHH
Q 018042 141 GRLLLGVGVGFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIGALAANFINYGTEQ-I---KGGWGWRVSLALAAVPAS 215 (361)
Q Consensus 141 ~r~l~G~~~~~~~~~~~~~~~e~~-~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~-~---~~~~~wr~~~~~~~~~~~ 215 (361)
.+++.+++.+....+..++..|.. ++++|++..++.+.+..+|..+++.+...+.. . .+..+||+.+.+.+++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~ 184 (437)
T TIGR00792 105 TYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGV 184 (437)
T ss_pred HHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHH
Confidence 788889988888888888889987 46889999998888888877666554333321 1 234589999988888777
Q ss_pred HHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHH
Q 018042 216 ILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 294 (361)
Q Consensus 216 ~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (361)
+..+.. ++.||+++. .+ .++ +++.+.++.++++++++.... ..+.
T Consensus 185 ~~~~~~~~~~~e~~~~----~~-~~~-------------------------~~~~~~~~~~~~l~~~~~~~~----~~~~ 230 (437)
T TIGR00792 185 VSLIICFFGTKERYSE----IP-KNI-------------------------EKKLSLKQIFKALFKNDQLLI----LCLA 230 (437)
T ss_pred HHHHHHHcCCEecCCC----CC-ccc-------------------------ccCCCHHHHHHHHhCCHHHHH----HHHH
Confidence 666554 557775410 00 000 000001112344444432222 2222
Q ss_pred HHHHhcchhhhHHcHHHHHHhc-CCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 295 FFQQVTGINVIAFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.+...........+.+++.+.. + +....+.+.....++.+++.++.++ ++||+|+|+++..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~--l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPR--LVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCcHHHHHHH
Confidence 2222223333334445554432 4 4455566666778888899999998 69999999876554
No 93
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.76 E-value=3.9e-17 Score=150.74 Aligned_cols=137 Identities=16% Similarity=0.169 Sum_probs=120.7
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh-hchhHHHHHHHHHHHHHHHHhhhhhhHHH-HHHHHHHHHhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGAAVNVYM-LIFGRLLLGVGVGF 151 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~r~l~G~~~~~ 151 (361)
++++|++.++.+++.+.+.....+..+++|+++|| +|||++++.+.+++.++.++++++++... ++++|+++|+|.|.
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~ 121 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGL 121 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcccc
Confidence 55678899999999999998888889999999999 99999999999999999999998876544 45789999999999
Q ss_pred hhhHHHHHHHhcCCccc--ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHH
Q 018042 152 ANQSVPLYLSEMAPARY--RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVP 213 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~--R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~ 213 (361)
..+...++++|.+|+++ |..+.+++..+.++|..++|.+++.+.+. .|||+.|++.++.
T Consensus 122 ~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~---~gw~~~F~i~~i~ 182 (489)
T PRK10207 122 FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK---FGYSVTYNLCGAG 182 (489)
T ss_pred ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh---hChHHHHHHHHHH
Confidence 99999999999998874 57789999999999999999998887754 4799999886543
No 94
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.76 E-value=1.2e-17 Score=151.77 Aligned_cols=243 Identities=10% Similarity=0.014 Sum_probs=155.0
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhch-hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Q 018042 72 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR-KPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 150 (361)
.+++++|++.+++|++.+++.++..+++++.|.++||+|| |+++.++.++..++..+..+.++++.+.+.|++.|++.+
T Consensus 28 ~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 107 (418)
T TIGR00889 28 YMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYM 107 (418)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc
Confidence 3466779999999999999999999999999999999965 778888888888888888888999999999999999877
Q ss_pred hhhhHHHHHHH--------hcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 151 FANQSVPLYLS--------EMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 151 ~~~~~~~~~~~--------e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
...+...++.. |......|.+..+ .+|.++++.+++.+.. ...|+. |++.++..++..+..+
T Consensus 108 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~---~~~~~~-f~~~~~~~~~~~~~~~ 177 (418)
T TIGR00889 108 PTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDI---ELSNIQ-LYITAGSSALLGVFAL 177 (418)
T ss_pred cHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcc---cchhHH-HHHHHHHHHHHHHHHh
Confidence 66665554432 2222223444444 2566667777655522 124654 4444444455555556
Q ss_pred cccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcch
Q 018042 223 FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 302 (361)
Q Consensus 223 ~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
++||+|+. +++ + + .+. . +..+.+.++.+|++.....++...+ .....
T Consensus 178 ~~~e~~~~---~~~-~-~-----------~~~------------~-~~~~~~~~~~~k~~~~~~~~~~~~~----~~~~~ 224 (418)
T TIGR00889 178 TLPDIPVA---KST-A-K-----------MSI------------K-VMLGLDAFILFKNKRMAIFFFFSML----LGAPL 224 (418)
T ss_pred cCCCCCCC---ccc-c-c-----------cCH------------H-HHhhhhHHHHhcCCCeeeHHHHHHH----HHhHH
Confidence 68887531 000 0 0 000 0 0001122334444332222222111 11122
Q ss_pred hhhHHcHHHHHHhcCCCC--------hhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 303 NVIAFYAPLLFRTIGLGR--------LKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 303 ~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.....+.+.++++.|.++ +..+.......+..+++.+..++ ++||+|||+++..+
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~--l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 225 QITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPF--FLKRFGIKKVMLLS 287 (418)
T ss_pred HHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHHhCcHHHHHHH
Confidence 334456677777666543 55678888888888899999998 69999999887654
No 95
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.74 E-value=4.9e-17 Score=151.16 Aligned_cols=183 Identities=19% Similarity=0.185 Sum_probs=131.1
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHH---hhhhhhHHHHHHHHHHHHhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL---GGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+. ...+++...+++++++.|++.+.
T Consensus 279 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 358 (490)
T PRK10642 279 HNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNC 358 (490)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 344667777777788888999999999999999999999988877654433322 22345577778889999988887
Q ss_pred hhhHHHHHHHhcCCcccccchhhH-HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhH
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNS 230 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~ 230 (361)
..+....++.|.+|++.|+++++. ++.+. ++..++|.+...+.... .+|+..+++..++.++..+..+++||+|++
T Consensus 359 ~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~-~~g~~~p~i~g~l~~~~--~~~~~~~~~~~~~~~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 359 FTGVMASTLPAMFPTHIRYSALAAAFNISV-LVAGLTPTLAAWLVEST--QNLMMPAYYLMVVAVIGLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHCCCccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 777888899999999999999997 55544 44456666655444322 257777766666666666666778999998
Q ss_pred HHhh----CCCHHHHHHHHHHhhCCcchHHHHHHHH
Q 018042 231 LIQR----KSDHQKAKLMLQRVRGTNDVEAEFDDLL 262 (361)
Q Consensus 231 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (361)
+.++ +.+.||+++.+++++. +.+++.++++
T Consensus 436 ~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~i~ 469 (490)
T PRK10642 436 PLKGATPAASDIQEAKEILVEHYD--NIEQKIDDID 469 (490)
T ss_pred CCCCccccccchhhHHHHhhcccc--cccchhhhcc
Confidence 7754 2337888888887763 3344444443
No 96
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.71 E-value=4.9e-16 Score=143.36 Aligned_cols=140 Identities=18% Similarity=0.246 Sum_probs=125.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh-hchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
+|++..+.+.+.+.+.++..+++++.|+++|| +|||+++.++.++.+++.++.+++++++.++++|++.|++.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 78899999999999999999999999999999 89999999999999999999999999889999999999999999999
Q ss_pred HHHHHHhcCCccc---ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHH
Q 018042 156 VPLYLSEMAPARY---RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 219 (361)
Q Consensus 156 ~~~~~~e~~~~~~---R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 219 (361)
..++++|++|+++ |+.+.++++.+.++|..+++.+++.+.+ +.+|++.|.+.++..++..+
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~---~~g~~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE---NYGYHVGFNLAAVGMVIGLL 186 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH---hcChHHHHHHHHHHHHHHHH
Confidence 9999999998765 8889999999999999999999877764 34799999887755444433
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.70 E-value=1.6e-16 Score=143.60 Aligned_cols=247 Identities=12% Similarity=-0.007 Sum_probs=159.2
Q ss_pred ccccccccCCchhHHHHH--HHHHHHHHHHHHhh-HHHHHhhchhHHHHHHHHHH-HHHHHHhh---hhhh-HHHHHHHH
Q 018042 71 TKISNYCKFDSQLLTSFT--SSLYVAGLVASFVA-SSVTRAFGRKPSVLMGGAAF-LAGSALGG---AAVN-VYMLIFGR 142 (361)
Q Consensus 71 ~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~d~~Grr~~l~~~~~~~-~~~~~~~~---~~~~-~~~~~~~r 142 (361)
|...++.|.+.+++|.+. +...+...+.+++. ++..||+|||+..++.+.+. .+.....+ ...+ ...++..-
T Consensus 25 p~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (390)
T TIGR02718 25 PTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLL 104 (390)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHH
Confidence 334555688999999974 55567777777777 55789999999876655332 21122222 2222 33444555
Q ss_pred HHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 143 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
++.++..+...+....+..|..++++++...+....+..+|.++++.....+.+ +.+||..|++.++..++..+..+
T Consensus 105 ~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~---~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 105 ACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG---KFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCHHHHHHHHHHHHHHHHHHHH
Confidence 666677777888888888999988888888888888888898888877555543 34899999998887776665555
Q ss_pred cccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcch
Q 018042 223 FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 302 (361)
Q Consensus 223 ~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
+++|+++. +++ .++ +...+.++.++++..+.......+ .....
T Consensus 182 ~~~~~~~~---~~~-~~~-----------------------------~~~~~~~~~l~~~~~~~~~~~~~l----~~~~~ 224 (390)
T TIGR02718 182 WLKDRAVA---SPE-APL-----------------------------ARRASLFRFFRRPLAWSLLALALL----SAMTA 224 (390)
T ss_pred HcCCCCcC---ccc-cch-----------------------------hhHHHHHHHHcCcCHHHHHHHHHH----HHHHH
Confidence 55443210 000 000 001134455555443333322222 22223
Q ss_pred hhhHHcHHHHHHhcCCCChhhHHHhhhhh-hcccccccchhhHHHHhhhccceeeccc
Q 018042 303 NVIAFYAPLLFRTIGLGRLKVCQLSKWIE-CGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 303 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.....+.+.++++.|++.++.+....... ...+++.++.++ +.||+|+|+.+..+
T Consensus 225 ~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~--l~~r~g~~~~l~~~ 280 (390)
T TIGR02718 225 VSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAW--LVRRAGLWRTFILG 280 (390)
T ss_pred HHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHH
Confidence 34455667777788999999999887765 466778889999 69999999876543
No 98
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=9.1e-16 Score=133.26 Aligned_cols=279 Identities=10% Similarity=0.045 Sum_probs=193.2
Q ss_pred cchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHH
Q 018042 20 KITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVAS 99 (361)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (361)
+..+++|+++.++++-.+..++....+++. .+..++.|| +.+..-|++.+|.+.+....
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i--------------------~n~~~~~Yg-s~~~~~wlsmIym~v~vp~g 96 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPI--------------------NNYVNSFYG-SSSAADWLSMIYMVVSVPFG 96 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhH--------------------HHHHHHHhc-chHHHHHHHHHHHHHHHHHh
Confidence 567789999998888887777766555444 222244456 67778899999999999999
Q ss_pred HhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh------hhHH--HHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccc
Q 018042 100 FVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA------VNVY--MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGA 171 (361)
Q Consensus 100 ~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~------~~~~--~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~ 171 (361)
+++-|+.||+|-|..++++..+.++++.+-..+ +.++ ....+..+.+.++-.....-.....-||++++|..
T Consensus 97 f~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~ 176 (480)
T KOG2563|consen 97 FAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAI 176 (480)
T ss_pred hHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhh
Confidence 999999999999999999999999999988775 3345 66678889988887777666678889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccC---CCcchHHH--HHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHH
Q 018042 172 INNGFQFSIGIGALAANFINYGTEQIK---GGWGWRVS--LALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLML 245 (361)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~wr~~--~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~ 245 (361)
+..+-..+..+|.+++.++...+.... ++..|... |+....+..+.+++. +..++.|+......+ .
T Consensus 177 A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~------~-- 248 (480)
T KOG2563|consen 177 ATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQ------A-- 248 (480)
T ss_pred hhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhH------h--
Confidence 999888888888888888766666543 33466553 443333333333333 334444422111100 0
Q ss_pred HHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHH
Q 018042 246 QRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQ 325 (361)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~ 325 (361)
.+.+....++.++.+++ +.++...+.+......++.+...+...+...|++...++.
T Consensus 249 -------------------~~~~~~f~~si~~~~~n----~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ 305 (480)
T KOG2563|consen 249 -------------------ALQDASFPKSIKSCFKN----RQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGY 305 (480)
T ss_pred -------------------hhhcCcHHHHHHHHHcC----ccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccch
Confidence 00011123455666655 3333344445545555555555555444445888889999
Q ss_pred HhhhhhhcccccccchhhHHHHhhhcc
Q 018042 326 LSKWIECGGSIGFGRNMWVKWMNRVRW 352 (361)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~l~dr~gr 352 (361)
......+++++|+++.|. +.||.+.
T Consensus 306 ig~l~iv~Gmlga~~~gi--i~Dktk~ 330 (480)
T KOG2563|consen 306 IGALMIVAGMLGALASGI--IADKTKK 330 (480)
T ss_pred hHHHHHHHHHHHHHHHHh--hhhhhhh
Confidence 999999999999999999 5999865
No 99
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.68 E-value=9.5e-16 Score=141.43 Aligned_cols=241 Identities=15% Similarity=0.144 Sum_probs=170.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHhhhhhhhh
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
|+...+++..+..+-..+.++++|.++||+.||++++.+.++..+..+..++. .+++.+++.-++.|++.+...|
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~P 122 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNP 122 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999999999999999999999999999988776655544432 4788899999999999999999
Q ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhh
Q 018042 155 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQR 234 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~ 234 (361)
...+++.|..|+++...++++.+...++..++||.+++.+.... |-.+.|.+.++..++........+..++ .+
T Consensus 123 A~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~---G~~~~f~inalsfl~~i~~l~~~~~~~~---~~ 196 (524)
T PF05977_consen 123 AWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF---GAAAAFLINALSFLISILALLRWKPPPP---PS 196 (524)
T ss_pred HHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHcccccc---cc
Confidence 99999999999999999999999999999999999988776543 5677787776655544433333332210 00
Q ss_pred CCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH
Q 018042 235 KSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR 314 (361)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (361)
+. .+| .. .+..+..++.+.+++..+..++...+.. +. ...+...+|.+.+
T Consensus 197 ~~-~~e--~~-----------------------~~~l~~G~ryv~~~~~l~~~l~~~~~~~---l~-~~a~~aLlPl~a~ 246 (524)
T PF05977_consen 197 SL-PRE--RF-----------------------FSALREGLRYVRSSPPLRSVLLRSFLFN---LF-ASAVWALLPLFAR 246 (524)
T ss_pred cc-chh--hh-----------------------hhhHHHHHHHHhcchHHHHHHHHHHHHH---Hh-hhHHHHhhhHHHH
Confidence 00 000 00 0001223333333332222222111111 11 1234455788875
Q ss_pred -hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 315 -TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 315 -~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
..|.++...+++....++|.++|.++.+. +.+|+++++++..
T Consensus 247 ~~l~~~a~~yGll~a~~gvGai~Gal~~~~--l~~~~~~~~lv~~ 289 (524)
T PF05977_consen 247 DVLGGGASGYGLLLAAFGVGAILGALLLPR--LRRRLSSRRLVLL 289 (524)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHHHHHH--hhcccCcchhhHH
Confidence 45899999999999999999999999998 5788877766543
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.67 E-value=1.8e-15 Score=137.31 Aligned_cols=154 Identities=18% Similarity=0.209 Sum_probs=118.6
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHH----hhchhHHHHHH-HHHHHHHHHHhhhhhhHH-------------
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR----AFGRKPSVLMG-GAAFLAGSALGGAAVNVY------------- 136 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Grr~~l~~~-~~~~~~~~~~~~~~~~~~------------- 136 (361)
+++|.+..+.+++..+..+...+.+++.|+++| |+|||+.++.+ .+...++.++.+++++.+
T Consensus 32 ~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~ 111 (477)
T TIGR01301 32 QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKP 111 (477)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchh
Confidence 446889999999999999999999999999999 59999998874 666666667777766542
Q ss_pred ----HHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccc--cchhhHHHHHHHHHHHHHHHHHhhhc--cc----CCC----
Q 018042 137 ----MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYR--GAINNGFQFSIGIGALAANFINYGTE--QI----KGG---- 200 (361)
Q Consensus 137 ----~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R--~~~~~~~~~~~~~g~~~~~~~~~~~~--~~----~~~---- 200 (361)
.++++-.+..++.....++..++++|.+|+++| +.+.++.+...++|.++++.+++... .. ...
T Consensus 112 ~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~ 191 (477)
T TIGR01301 112 RAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGV 191 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccc
Confidence 333344455567888888999999999998876 57899999999999999999887641 11 000
Q ss_pred --cchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 201 --WGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 201 --~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
.+.|+.|++.++..++..+.. ++.+|.|
T Consensus 192 ~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 192 SCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 267889998887777666555 5588876
No 101
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.63 E-value=4.8e-15 Score=113.49 Aligned_cols=135 Identities=27% Similarity=0.392 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCccc
Q 018042 89 SSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARY 168 (361)
Q Consensus 89 ~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~ 168 (361)
+.+.++..++.++.|++.||+|||+.+..+..+..++.+.....++++.+.+.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 34567888999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-ccC
Q 018042 169 RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPE 226 (361)
Q Consensus 169 R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~e 226 (361)
|++..++.+....+|..+++.+...+.+ ..+|++.+++.+...++..+..++ .||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQ---FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhc---ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999776653 347999998887776666555543 555
No 102
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.62 E-value=4.5e-17 Score=150.66 Aligned_cols=274 Identities=15% Similarity=0.172 Sum_probs=3.0
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-----------------
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----------------- 132 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----------------- 132 (361)
.+.+++.|++++++.|++.+.+-++..+..++..++.+|..|-+.+-.|.++.+++++++++-
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 667899999999999999999999999999999999999888889999999999999887751
Q ss_pred --------h-------------------------hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHH
Q 018042 133 --------V-------------------------NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFS 179 (361)
Q Consensus 133 --------~-------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~ 179 (361)
- -++.+++++++.|+|....++...+|+-|..++++-+..+++..+.
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 0 1356778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCC---------------Cc----chHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHH
Q 018042 180 IGIGALAANFINYGTEQIKG---------------GW----GWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQK 240 (361)
Q Consensus 180 ~~~g~~~~~~~~~~~~~~~~---------------~~----~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~ 240 (361)
..+|.++|.++++...+... +. .|-.-|++.++..++..+..+++|+..+...+.+ ++
T Consensus 186 ~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~---~~ 262 (539)
T PF03137_consen 186 SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQ---EE 262 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccccc---ch
Confidence 99999999999876664311 01 2555566666666666666666665532110000 00
Q ss_pred HHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCC
Q 018042 241 AKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLG 319 (361)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s 319 (361)
++....+. ++..+++.++.+ ......+..+.+...+++..++++++...+...........+..+.|.|++ +++.+
T Consensus 263 ~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~s 339 (539)
T PF03137_consen 263 KESSERKE--EDSDKDSFKDPK-SKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLS 339 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhcch--hhhhhhcccccc-cccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 00000000 000000000000 000000111223333345566688888888888888888999999999996 56999
Q ss_pred ChhhHHHhhhhhh-cccccccchhhHHHHhhhc
Q 018042 320 RLKVCQLSKWIEC-GGSIGFGRNMWVKWMNRVR 351 (361)
Q Consensus 320 ~~~~~~~~~~~~~-~~~~g~~~~~~~~l~dr~g 351 (361)
++.+..+.....+ +..+|.+++|+ +++|+.
T Consensus 340 as~A~~l~G~v~ip~~~~G~llGG~--ivkk~k 370 (539)
T PF03137_consen 340 ASQASLLTGIVSIPGAALGILLGGY--IVKKFK 370 (539)
T ss_dssp ---------------------------------
T ss_pred HHHHHHHHhhhhcchhheehheEEE--EEEEec
Confidence 9988888766544 67789999998 588774
No 103
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.61 E-value=3.5e-14 Score=126.81 Aligned_cols=190 Identities=16% Similarity=0.165 Sum_probs=142.2
Q ss_pred CcchHHHHHHHHHHHHhhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHH
Q 018042 19 GKITAFVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVA 98 (361)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (361)
++.+|+...++. +..++.+...+++.+. +.+|.+.. |.+.+.+..|++.++..++.+++
T Consensus 29 ~~t~wrsi~l~~---~~sfl~~v~~sI~~~s--~wpYl~~l----------------D~~A~~~ffG~viaa~slg~~i~ 87 (488)
T KOG2325|consen 29 RKTNWRSIYLAL---LNSFLVAVQFSIYLTS--MWPYLQKL----------------DPTATATFFGLVIAASSLGHAIF 87 (488)
T ss_pred cCCchHhHHHHH---HHHHHHhhhheEEEee--cchhhhhc----------------CCCCCcchhhHHHHHHHHHHHhc
Confidence 334444444333 4456667777666444 33444332 33558889999999999999999
Q ss_pred HHhhHHHHHhhch-hHHHHHHHHHHHHHHHHh-hhh---h-hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccch
Q 018042 99 SFVASSVTRAFGR-KPSVLMGGAAFLAGSALG-GAA---V-NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAI 172 (361)
Q Consensus 99 ~~~~g~l~d~~Gr-r~~l~~~~~~~~~~~~~~-~~~---~-~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~ 172 (361)
++..|+++.|.+. |+.++.|.++..+++++. ++. + ..+.++++|++.|+|.|. ....-.|+++....++|.++
T Consensus 88 ~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA 166 (488)
T KOG2325|consen 88 SLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRA 166 (488)
T ss_pred chhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHH
Confidence 9999999999986 788899999999999988 332 3 678899999999999664 56888999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCC----------cchHHHHHhhHHHHHHHHHhc-ccccCChhH
Q 018042 173 NNGFQFSIGIGALAANFINYGTEQIKGG----------WGWRVSLALAAVPASILTLGA-LFLPETPNS 230 (361)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~----------~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~ 230 (361)
++....+..+|.++||.++..+..+.+. .-+..+-|+.++..++.++.. .+++|.++.
T Consensus 167 ~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 167 FAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 9999999999999999998877765421 123345567777777666655 457887653
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.61 E-value=1.8e-15 Score=139.00 Aligned_cols=247 Identities=11% Similarity=0.035 Sum_probs=149.8
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh----hchh-HHHHHHHHHHHHHHHHhhhhhh------HHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRK-PSVLMGGAAFLAGSALGGAAVN------VYMLIFGR 142 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r 142 (361)
.+++|++..+.|.+.++..+..++..|+.|+++|| +||| +.++.+.+..++...+....++ .+.+++..
T Consensus 37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~ 116 (444)
T PRK09669 37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY 116 (444)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 45579999999999999999999999999999999 7874 5556677777666655444432 45556666
Q ss_pred HHHHhhhhhhhhHHHHHHHhcC-CcccccchhhHHHHHHHHHHHHHHHHHhhhccc----CCCcchHHHHHhhHHHHHHH
Q 018042 143 LLLGVGVGFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIGALAANFINYGTEQI----KGGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~-~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~wr~~~~~~~~~~~~~ 217 (361)
++.+.+......+..++.+|+. ++++|.+..+....+..+|..+++.+...+... ..+.+|+..+.+.+++..+.
T Consensus 117 ~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 117 ILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 6777777777778889999998 557899888887777777766665543322211 22358998888877776665
Q ss_pred HHhcc-cccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHH
Q 018042 218 TLGAL-FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFF 296 (361)
Q Consensus 218 ~~~~~-~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (361)
.+..+ ..+|.++. ++ +++.+.+++.++.++++..+..+....+.
T Consensus 197 ~~~~~~~~~e~~~~----~~-----------------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~~-- 241 (444)
T PRK09669 197 FFCCFFMTKERYTP----EV-----------------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVVL-- 241 (444)
T ss_pred HHHHhCCeEEecCC----CC-----------------------------cCCCCHHHHHHHHhCCchHHHHHHHHHHH--
Confidence 55443 35553210 00 00000122344555554433332222211
Q ss_pred HHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 297 QQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
...........+++.+..--+.+....+.....+..+++.++.++ ++||+|+|+.+..+
T Consensus 242 --~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~--l~~r~gk~~~~~~~ 300 (444)
T PRK09669 242 --LTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSER--LLGKFDRVRAFKWT 300 (444)
T ss_pred --HHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhChHHHHHHH
Confidence 111122222223333222112233334444555667778888888 69999999876543
No 105
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.61 E-value=2.4e-14 Score=132.95 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=117.0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh-hchhHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGAAV-NVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~ 151 (361)
++++|++.++.++..+.+........++.|+++|| +|||+++..+.++..++.+++++++ +.+.+.++|++.|++.|.
T Consensus 49 ~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~ 128 (500)
T PRK09584 49 VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGL 128 (500)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhc
Confidence 55678899888888888776666667899999999 5999999999999999999888874 456677889999999999
Q ss_pred hhhHHHHHHHhcCCccc--ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHH
Q 018042 152 ANQSVPLYLSEMAPARY--RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~--R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 217 (361)
..+...++++|++|+++ |..+.++++.+.++|..++|.+++.+.+ +.|||+.|.+.++...+.
T Consensus 129 ~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~---~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 129 FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAA---KYGWSVAFALSVVGMLIT 193 (500)
T ss_pred ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHH
Confidence 88999999999998654 4457888899999999999999887764 348999999877544443
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.61 E-value=1.8e-15 Score=138.47 Aligned_cols=249 Identities=14% Similarity=0.145 Sum_probs=170.3
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHH----hhchhHHH-HHHHHHHHHHHHHhhhh-h-------hHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR----AFGRKPSV-LMGGAAFLAGSALGGAA-V-------NVYMLIF 140 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Grr~~l-~~~~~~~~~~~~~~~~~-~-------~~~~~~~ 140 (361)
.+.+|+++...+.+..+.-+..++..|+.|.++| |+|||+.+ +++.+..+++.++.... | ....+.+
T Consensus 29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~ 108 (428)
T PF13347_consen 29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFV 108 (428)
T ss_pred HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHH
Confidence 4445889999999999999999999999999999 89977554 56777788877777655 4 2234566
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhcCC-cccccchhhHHHHHHHHHHHHHHHHHhhhcccCC---C-cchHHHHHhhHHHHH
Q 018042 141 GRLLLGVGVGFANQSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKG---G-WGWRVSLALAAVPAS 215 (361)
Q Consensus 141 ~r~l~G~~~~~~~~~~~~~~~e~~~-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~-~~wr~~~~~~~~~~~ 215 (361)
..++..++......+..++..|..+ +++|.+..+.-..+..+|..+...+...+....+ . .+|++...+.+++.+
T Consensus 109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 6777799999999999999999998 4689999999888888888655555443333222 1 279999988888877
Q ss_pred HHHHhccc-ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHH
Q 018042 216 ILTLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 294 (361)
Q Consensus 216 ~~~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (361)
+..+...+ .+|.++ + .+ +++++.+.++.++++++++.... ....
T Consensus 189 v~~~i~~~~~ke~~~------~-~~------------------------~~~~~~~~~~~~~~~~~nr~~~~----l~~~ 233 (428)
T PF13347_consen 189 VFFLITFFFVKERSV------E-VT------------------------EQEKKISLRDSLRSLFRNRPFRI----LLLA 233 (428)
T ss_pred HHhhhhhheeeeccc------c-cc------------------------ccccccccccchhhhcccchHHH----HHHH
Confidence 76666544 677211 0 00 00111122334555555543333 3333
Q ss_pred HHHHhcchhhhHHcHHHHHHhc-CCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecccC
Q 018042 295 FFQQVTGINVIAFYAPLLFRTI-GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 360 (361)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~~ 360 (361)
.+.............+++.+.. |.+ ...+.......++.+++.++.++ ++||+|+|+.+..+.
T Consensus 234 ~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~--l~~r~gk~~~~~~~~ 297 (428)
T PF13347_consen 234 FFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGR--LSKRFGKKKVYIIGL 297 (428)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHH--HHHHccceeehhhhH
Confidence 3333344455555666666554 544 45566677778888899999998 699999999887654
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.60 E-value=5.6e-15 Score=136.71 Aligned_cols=251 Identities=12% Similarity=0.048 Sum_probs=152.2
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHH----hhch-hHHHHHHHHHHHHHHHHhhhhh------hHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR----AFGR-KPSVLMGGAAFLAGSALGGAAV------NVYMLIFGR 142 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~r 142 (361)
.+.+|++...+|.+..+.-+.-++..|+.|.++| |+|| |+.++.+.+..+++..+....+ .+..+.+..
T Consensus 34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~ 113 (473)
T PRK10429 34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTY 113 (473)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHH
Confidence 3446889999999999999999999999999999 6798 5666678777777765554322 133455556
Q ss_pred HHHHhhhhhhhhHHHHHHHhcC-CcccccchhhHHHHHHHHHHHHHHHHHhhh----cccCCCcchHHHHHhhHHHHHHH
Q 018042 143 LLLGVGVGFANQSVPLYLSEMA-PARYRGAINNGFQFSIGIGALAANFINYGT----EQIKGGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~-~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~wr~~~~~~~~~~~~~ 217 (361)
++.+++......+..++..|+. ++++|.+..++-..+..+|..+.+.+...+ ....+..+|+....+.+++.++.
T Consensus 114 ~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~ 193 (473)
T PRK10429 114 ILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVS 193 (473)
T ss_pred HHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 7778888888888999999998 688999988886666666654444432211 11122236888777776666654
Q ss_pred HHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHH
Q 018042 218 TLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFF 296 (361)
Q Consensus 218 ~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (361)
.+.. +..+|.+.. ++ ++ .+++++.++++.++...+++.+.......+
T Consensus 194 ~~~~~~~~~e~~~~----~~--~~--------------------------~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~ 241 (473)
T PRK10429 194 TIITLRNVHEVYSS----DN--QV--------------------------SAEGSHLTLKDIVALIYKNDQLSCLLGMAL 241 (473)
T ss_pred HHHHHcCceecCCc----cc--cc--------------------------cccccCCCHHHHHHHHhcCHHHHHHHHHHH
Confidence 4444 336664310 00 00 000011223333221111122222222222
Q ss_pred HHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 297 QQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
...........+.+++.+...-+....+.+.....++.+++.++.++ +.||+|+|+.+.+
T Consensus 242 ~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~--l~~r~gkk~~~~~ 301 (473)
T PRK10429 242 AYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPR--LVKSLSRRILWAG 301 (473)
T ss_pred HHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCcHHHHHH
Confidence 22233344444555555443334444555556666778888888888 6999999988754
No 108
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.57 E-value=5.2e-14 Score=134.46 Aligned_cols=141 Identities=16% Similarity=-0.014 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhc
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 163 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~ 163 (361)
......+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++.+++.|++.+..++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677789999999999999999999999999999999999999998888888889999998888899999999999
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 018042 164 APARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 228 (361)
Q Consensus 164 ~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 228 (361)
+|++.|++++++......+|.+++|.+++.+... +...+|++.+++.++..++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~----~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI----TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999997755432 345677777777777666667789874
No 109
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.57 E-value=1.5e-14 Score=133.14 Aligned_cols=265 Identities=11% Similarity=-0.006 Sum_probs=161.1
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc-----hhHHHHHHHHHHH-HHHHHhhhhhhHHHH-HHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-----RKPSVLMGGAAFL-AGSALGGAAVNVYML-IFGR 142 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~r 142 (361)
.|-+++++|++.++++...+...+...+-.+ +|+++||++ ||+.++++.++.. +.....+..++.... .+..
T Consensus 49 ~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 127 (468)
T TIGR00788 49 SPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFI 127 (468)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 3445667899999999999999999998665 999999998 7787788776663 444444444554444 4478
Q ss_pred HHHHhhhhhhhhHHHHHHHhcCCcccccchhh---HHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHH
Q 018042 143 LLLGVGVGFANQSVPLYLSEMAPARYRGAINN---GFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 219 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 219 (361)
++.+++.+......-++..|..+ +++....+ .......+|.++++.+++.+.+. .+||..|++.+...++..+
T Consensus 128 ~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~---~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 128 FLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK---TLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh---cCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999998 55544333 33333457888888887766643 4799999988877777755
Q ss_pred hcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHh
Q 018042 220 GALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQV 299 (361)
Q Consensus 220 ~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (361)
..++++|++.....+. .++....... ...... +..++......+.++++..++.+....+.+. .
T Consensus 204 ~~~~~~E~~~~~~~~~--~~~~~~~~~~--------~~~~~~----~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~- 267 (468)
T TIGR00788 204 VSNLSKERRAFVRPRI--GTYLEMNMAL--------LTLGVL----ANVKVQILGLRGAIQLLEIAKPLIFIFLSYA-N- 267 (468)
T ss_pred HHHhcccccccccccc--cccchhhhhh--------hhhhHH----HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh-h-
Confidence 5566788631100000 0000000000 000000 0000001122223333222221221111011 1
Q ss_pred cchhhhHH-cHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 300 TGINVIAF-YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 300 ~~~~~~~~-~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
....... +. ...+..|+++...+.......++.++|....+. +.+|++.|+++.++
T Consensus 268 -~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~--~~~~~~~r~~l~~~ 324 (468)
T TIGR00788 268 -LPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDR--FLKTFPYRLLFGVT 324 (468)
T ss_pred -cCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHH
Confidence 1111111 11 111356999999999999999999999999998 57899988876544
No 110
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.56 E-value=3.7e-15 Score=138.29 Aligned_cols=265 Identities=15% Similarity=0.167 Sum_probs=194.3
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-----------------
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----------------- 132 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----------------- 132 (361)
...+++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|++++++++++.++-
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 667799999999999999999999999999999999999999999999999999999988761
Q ss_pred ---h-------------------------------hHH-HHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHH
Q 018042 133 ---V-------------------------------NVY-MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQ 177 (361)
Q Consensus 133 ---~-------------------------------~~~-~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~ 177 (361)
+ .++ .++++.++.|+|....++...+|+-|...+++-+..+++..
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 0 023 56667999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCc----------------chHHHHHhhHHHHHHHHHhcccccCChhHHHhhCCCHHHH
Q 018042 178 FSIGIGALAANFINYGTEQIKGGW----------------GWRVSLALAAVPASILTLGALFLPETPNSLIQRKSDHQKA 241 (361)
Q Consensus 178 ~~~~~g~~~~~~~~~~~~~~~~~~----------------~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~ 241 (361)
....+|.++|.+++.+..++..+. .|..-|++.+.+.++..+..+++|...+...++ +++.
T Consensus 280 ~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~---~~~~ 356 (735)
T KOG3626|consen 280 SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKR---KRAR 356 (735)
T ss_pred HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcccccc---chhh
Confidence 999999999999988877532211 466667778887777777777777654211100 0000
Q ss_pred HHHHHHhhCCcchHHHHHHHHHHHhhhhhccc---chhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcC
Q 018042 242 KLMLQRVRGTNDVEAEFDDLLKASSTAKTINH---PFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIG 317 (361)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g 317 (361)
+. +..+.+++ ..++.....+ .+.+.+++...+++++...+...+....+.....|+|.|++ ++|
T Consensus 357 ~~--~~~k~~~~----------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg 424 (735)
T KOG3626|consen 357 DL--HVLKTESG----------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFG 424 (735)
T ss_pred hh--cccccccc----------cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcC
Confidence 00 00000000 0000011111 22222334444578888888888888889999999999996 569
Q ss_pred CCChhhHHHhhhhhh-cccccccchhhHHHHhhhc
Q 018042 318 LGRLKVCQLSKWIEC-GGSIGFGRNMWVKWMNRVR 351 (361)
Q Consensus 318 ~s~~~~~~~~~~~~~-~~~~g~~~~~~~~l~dr~g 351 (361)
.+...+..+.....+ +..+|.+++|++ +.|+.
T Consensus 425 ~sas~An~l~G~i~vp~~~~Gi~lGG~i--ikkfk 457 (735)
T KOG3626|consen 425 ISASLANILTGSIGVPAAAVGIFLGGLI--IKKFK 457 (735)
T ss_pred CCHHHHHHHhhhhhhhhhhhhhhcccee--eeeec
Confidence 999999888866544 455888888884 77664
No 111
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.52 E-value=2.5e-13 Score=123.60 Aligned_cols=149 Identities=15% Similarity=0.179 Sum_probs=124.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHHhhhhhhhhH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV----NVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
+.+..+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... +.+.+++.+++.|++.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456778899999999999999999999999999999999999888876666532 3456777899999999988889
Q ss_pred HHHHHHhcCCcccccchhhHHH-HHHHHHHHHHHHHHhhhcccCCC---cchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 156 VPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGG---WGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~---~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
...++.|++|+++|+++.++.+ ...++|.+++|++++.+.+..+. .||+..|.+.+++.++..+.. ++++|+.
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999999997 67889999999999887765432 579999988887777766665 4478774
No 112
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.52 E-value=7.4e-13 Score=119.83 Aligned_cols=149 Identities=15% Similarity=0.132 Sum_probs=121.9
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
++++|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+.....+........++.+.+++.+++.+++.+...
T Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~ 323 (393)
T PRK15011 244 INELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILG 323 (393)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 34457788888888888778888899999999999999998887776666655555566788888888999998888877
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 226 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 226 (361)
+....+..|.+|+ +|+++.++++....+|..+++.+++.+.+. .+|+..+++.+++.++..+..++.||
T Consensus 324 ~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 324 GIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEI---WNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 7888888999985 599999999888999999999998877653 47999999888887777777777765
No 113
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.50 E-value=4.5e-13 Score=122.33 Aligned_cols=142 Identities=18% Similarity=0.228 Sum_probs=113.9
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-chhHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAV-NVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~ 151 (361)
.+++|++..+.+.+.+.+.....++++++|+++||+ |||+++.++.++..++.++.+... +...+.++..+.++|.|.
T Consensus 37 ~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~ 116 (493)
T PRK15462 37 TNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGL 116 (493)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccc
Confidence 344688999999999999999999999999999999 999999999999999987776543 223344444455566677
Q ss_pred hhhHHHHHHHhcCCcc--cccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHH
Q 018042 152 ANQSVPLYLSEMAPAR--YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT 218 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~--~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~ 218 (361)
..+...++++|.+|++ +|..+.++...+.++|..++|.+.+.+.+ +.||++.|.+.++..++..
T Consensus 117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~---~~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE---EYSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh---hhChHHHHHHHHHHHHHHH
Confidence 7777889999999976 68999999999999999999999877654 3589999988765444333
No 114
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.49 E-value=1.2e-12 Score=117.43 Aligned_cols=246 Identities=15% Similarity=0.065 Sum_probs=158.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc-hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
.|+|..|+|.+.+...+...++++++|.++||++ +|+.+.+..++..+........++++.+++.-++..+...+..+.
T Consensus 32 ~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl 111 (400)
T PF03825_consen 32 RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPL 111 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHH
Confidence 4789999999999999999999999999999986 567777777777777777777889998888888888888888888
Q ss_pred HHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHH-HhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhh
Q 018042 156 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI-NYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQR 234 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~ 234 (361)
..++..+...+ ++.-.+-.-...++|-+++... ...+....+..+..+.+++.+..+++.....+.+|+.|+....+
T Consensus 112 ~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~ 189 (400)
T PF03825_consen 112 SDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAK 189 (400)
T ss_pred HHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCccccccC
Confidence 88887777653 2333444444455555444322 11122111112333455666555555555556678776210000
Q ss_pred CCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH
Q 018042 235 KSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR 314 (361)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (361)
+. .++....+..+++|++... + +.+..+...........+.+.|++
T Consensus 190 ~~------------------------------~~~~~~~~~~~llk~~~~~---~-Fll~~~l~~~~~~~~~~f~~~yl~ 235 (400)
T PF03825_consen 190 ES------------------------------VKKLLGLDALKLLKNPRFL---V-FLLAAFLIGISHAAYYTFFSIYLQ 235 (400)
T ss_pred CC------------------------------cccccchHHHHHhcCccHH---H-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000011223455553222 2 222223333345667778888899
Q ss_pred hcC-CCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecccC
Q 018042 315 TIG-LGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 360 (361)
Q Consensus 315 ~~g-~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~~ 360 (361)
+.| .+....+....+..++.++-....++ +..|+|.|+++.+++
T Consensus 236 ~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~--~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 236 ELGGYSGSTIGILWALGVVAEIPFFFFSGR--FLKRFGIKWLLLLAL 280 (400)
T ss_pred HcccchhhHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHHHHHH
Confidence 887 77788787777878888888888888 599999888876653
No 115
>PRK11462 putative transporter; Provisional
Probab=99.48 E-value=1e-12 Score=121.04 Aligned_cols=244 Identities=10% Similarity=-0.001 Sum_probs=149.4
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh----hchhH-HHHHHHHHHHHHHHHhhhhhh------HHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRKP-SVLMGGAAFLAGSALGGAAVN------VYMLIFGR 142 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r 142 (361)
.+.+|++...+|.+..+.-+.-++..|+.|.++|| +|||+ .++++.+..+++.++.-..|+ ...+.+.-
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITY 116 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 34458899999999999999999999999999996 78864 455576777777666544442 33455566
Q ss_pred HHHHhhhhhhhhHHHHHHHhcCC-cccccchhhHHHHHHHHHHHHHHHHHhhhcccC----CCcchHHHHHhhHHHHHHH
Q 018042 143 LLLGVGVGFANQSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIK----GGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~~-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~wr~~~~~~~~~~~~~ 217 (361)
++..++......+-.++.+|..+ +++|.+..++...+..+|..+++.+...+.... ...+|+....+.+++.++.
T Consensus 117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~ 196 (460)
T PRK11462 117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMM 196 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 77788888888889999999987 788999999988888888777666543322211 1236887777766665555
Q ss_pred HHhccc-ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHH
Q 018042 218 TLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFF 296 (361)
Q Consensus 218 ~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (361)
....++ .+|.++. ++ + +...++..+..++++..+..... .+
T Consensus 197 ~~i~~~~~kE~~~~----~~--~----------------------------~~~~~~~l~~~~~Nk~~~~l~~~----~~ 238 (460)
T PRK11462 197 LAFCFFTTKERVEA----PP--T----------------------------TTSMREDLRDIWQNDQWRIVGLL----TI 238 (460)
T ss_pred HHHHHhcceeccCC----Cc--c----------------------------CCCHHHHHHHHhCChHHHHHHHH----HH
Confidence 544433 4553210 00 0 00001123344444332222211 11
Q ss_pred HHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 297 QQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
..............++.+...-++...+.+.....++++++.+++++ +.||+++|+.+.
T Consensus 239 ~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~--l~~r~gkk~~~~ 297 (460)
T PRK11462 239 FNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKP--LTDWKCKVTIFW 297 (460)
T ss_pred HHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHH--HHHHhChHHHHH
Confidence 11122122222222232222112233344556667788888888888 699999987754
No 116
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.47 E-value=4.2e-13 Score=116.88 Aligned_cols=191 Identities=14% Similarity=0.083 Sum_probs=138.5
Q ss_pred hhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCC----------
Q 018042 130 GAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG---------- 199 (361)
Q Consensus 130 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------- 199 (361)
+...++..++++-++.|.|.+...+....++++..++|++.+.+++.+.++++|..++|.++..+.....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 3457899999999999999999999999999999999999999999999999999999999886653210
Q ss_pred ---CcchHHHHHhhHHHHHHHHHhccc--ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccc
Q 018042 200 ---GWGWRVSLALAAVPASILTLGALF--LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHP 274 (361)
Q Consensus 200 ---~~~wr~~~~~~~~~~~~~~~~~~~--~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (361)
...|+++|++.+.+.++..+.+.+ +||.++ ++ .++. .+++ ...
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~-~~~~-----------------------~~~~---~~~ 132 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----AD-VARV-----------------------SSGD---TTQ 132 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----cc-cccc-----------------------cccc---ccc
Confidence 137999998766665555544433 455321 00 0000 0000 000
Q ss_pred hhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHHh---cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhc
Q 018042 275 FKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFRT---IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVR 351 (361)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~g 351 (361)
.++.++ ++.++...+..++.......+..|.+.|+.+ .|+++.+++.....+..+.++|++++++ +.||++
T Consensus 133 ~~~~~~----~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~--l~~r~g 206 (310)
T TIGR01272 133 KTSAFQ----FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSA--VMPMIS 206 (310)
T ss_pred hhhHHh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC
Confidence 111222 2333345556666666677889999999964 4899999999999999999999999999 699999
Q ss_pred cceeecc
Q 018042 352 WRKLDIY 358 (361)
Q Consensus 352 rr~~~~~ 358 (361)
+|+++.+
T Consensus 207 ~~~~l~~ 213 (310)
T TIGR01272 207 QGRYLAF 213 (310)
T ss_pred HHHHHHH
Confidence 8877644
No 117
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.46 E-value=2.7e-14 Score=116.56 Aligned_cols=259 Identities=10% Similarity=0.052 Sum_probs=158.5
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh-hchhHHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHH
Q 018042 71 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGA---AVNVYMLIFGRLLLG 146 (361)
Q Consensus 71 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G 146 (361)
.+.+.+.+++.++..++-+.+..-..+-+++.|++.|| +|.|..-++-+++..++.++++. .+.+|.++++|++.|
T Consensus 68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG 147 (459)
T KOG4686|consen 68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG 147 (459)
T ss_pred hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeec
Confidence 34466677888888899999999999999999999998 69888888888888888887765 689999999999999
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc----ccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE----QIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
+|.-........|..-||..|+-+.++++.....-+|+.+-..+...+. .+....+-... .+...+....+
T Consensus 148 IGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~L-G~~l~~~~~tc---- 222 (459)
T KOG4686|consen 148 IGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLL-GLWLCFEVKTC---- 222 (459)
T ss_pred cCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHH-HHHHHHHHHHH----
Confidence 9988888888999999999999999999988888888654333322221 11111111100 00000000000
Q ss_pred cccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcch
Q 018042 223 FLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGI 302 (361)
Q Consensus 223 ~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
..+-......+..++++++..++-.+. ..+...+.+.. ...++.++ ....+++.....
T Consensus 223 --~~slical~lg~~D~rAerilh~e~g~-----------------~Ge~pkLtdv~--~f~ppfw~-~~iicv~yyva~ 280 (459)
T KOG4686|consen 223 --KQSLICALSLGLSDDRAERILHLEEGF-----------------LGEEPKLTDVN--TFYPPFWV-LVIICVLYYVAW 280 (459)
T ss_pred --HHHHHHHHHhhhhhhHHHHHHhhhcCc-----------------ccCCccccccc--ccCccHHH-HHHHHHHHHHHH
Confidence 001001111111122232222211110 00011111111 11122222 223333333333
Q ss_pred hhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 303 NVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 303 ~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.-+....|.+++ ++|+|+..++.+.+.......+-+.+.|. ++||.|++-+++.
T Consensus 281 fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~--i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 281 FPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGA--ISDKYGFNLWWVA 335 (459)
T ss_pred HHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHH--hHhhhcceehhHH
Confidence 444555666664 66999999999888887777777777787 4999999877654
No 118
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.45 E-value=1.5e-12 Score=118.93 Aligned_cols=148 Identities=18% Similarity=0.161 Sum_probs=123.6
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHH
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 157 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 157 (361)
+.+..+.+.+.++..++..++.++.|+++||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667789999999999999999999999999999999999999999888888899999999999999999888888888
Q ss_pred HHHHhcCCcccccchhhH-HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCCh
Q 018042 158 LYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETP 228 (361)
Q Consensus 158 ~~~~e~~~~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~ 228 (361)
.++.|.+|++.|+...+. ++....+|.++++.+.+.+.+. .||+..|.+.+++.++..+..+ ++++.+
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~---~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS---IGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh---hCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999887655 6777889999999997776653 4799999987777666554443 344443
No 119
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.42 E-value=4.3e-12 Score=112.70 Aligned_cols=145 Identities=22% Similarity=0.267 Sum_probs=131.6
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhH-HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKP-SVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
+|.+..+.+...+...++..++.++.+++.||+|||+ .+..+.++..++.+.....++.+.+++..++.|++.+...+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 206 LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPA 285 (352)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchh
Confidence 4778999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 156 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
...++.|..|+++|++.+++.+....+|..+++.+.+.+.+ +.+|++.+.+.+++.++..+..+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~---~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 286 LLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD---TGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHHHheec
Confidence 99999999999999999999999999999999999777664 3589999999888887776665443
No 120
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.42 E-value=3.8e-12 Score=115.77 Aligned_cols=148 Identities=14% Similarity=0.068 Sum_probs=121.3
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
++.|.+..+.+...+...++..++.++.|+++||+|||+.+..+.+...++.++....++.+.+.+..++.|++.+...+
T Consensus 248 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 327 (406)
T PRK11551 248 VGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQS 327 (406)
T ss_pred HhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHH
Confidence 33578888999999999999999999999999999999999887777777777777777888888888889998888888
Q ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 155 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
....++.|.+|+++|++..++.+....+|..++|.+.+.+.+.. .+|...++......++..+..++.
T Consensus 328 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 328 VLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG--RSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC--CchHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999987766432 256666666655555544444444
No 121
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.41 E-value=2.1e-12 Score=115.96 Aligned_cols=140 Identities=10% Similarity=-0.014 Sum_probs=117.3
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHHhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNV--YMLIFGRLLLGVGVGFA 152 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~~~~ 152 (361)
+++|.+.++.+.+.+...++..++.++.|++.||+|||+.+..+.++..++.++..+.++. ..++...++.|++.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 312 (377)
T TIGR00890 233 QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGT 312 (377)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccc
Confidence 3456778888999999999999999999999999999999999998888888877766643 33445678888888888
Q ss_pred hhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHH
Q 018042 153 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 153 ~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 217 (361)
.+..+.++.|.+|+++|++..++.+....+|..++|.+.+.+.+ +.||++.|.+.+++.++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 313 ISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT---EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh---hhchhhHHHHHHHHHHHh
Confidence 88888899999999999999999999999999999999776654 347999998877765543
No 122
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.41 E-value=1.1e-11 Score=113.34 Aligned_cols=247 Identities=17% Similarity=0.162 Sum_probs=165.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHH-HHHHHHHHHHHhhhh-h-hHHHHHHHHHHHHhhhhhhhhHHHH
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLM-GGAAFLAGSALGGAA-V-NVYMLIFGRLLLGVGVGFANQSVPL 158 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~-~~~~~~~~~~~~~~~-~-~~~~~~~~r~l~G~~~~~~~~~~~~ 158 (361)
+..++..++..+..++..|+.|.++|+-|+||.++. ...+..+.+.+..+. + +++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678888899999999999999999987765554 455555666666663 3 4444455566666788888888999
Q ss_pred HHHhcCCcccc--------------------------cchhhHHHHHHHHHHHHHHHHHhhhcccCC-----CcchHHHH
Q 018042 159 YLSEMAPARYR--------------------------GAINNGFQFSIGIGALAANFINYGTEQIKG-----GWGWRVSL 207 (361)
Q Consensus 159 ~~~e~~~~~~R--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~wr~~~ 207 (361)
++.|..+++.+ ++..+.-.....+|.++...+...+....+ ..+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999988 888888777777777776666554432222 12457777
Q ss_pred HhhHHHHHHHHHh-cccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhH
Q 018042 208 ALAAVPASILTLG-ALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQ 286 (361)
Q Consensus 208 ~~~~~~~~~~~~~-~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (361)
.+.++.-++..+. .+++||.|+....++. ..-... . .+..++.+++..+.+
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~-~~~~~~-------------g--------------~~~l~~t~k~~~~~~ 281 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSG-SSYLRF-------------G--------------FKRLWRTFKEIRKLR 281 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcc-hhHHHH-------------H--------------HHHHHHHHHHHHhCh
Confidence 7776665555444 4558887642000000 000000 0 001122222222234
Q ss_pred HHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccc--eeecc
Q 018042 287 LLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWR--KLDIY 358 (361)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr--~~~~~ 358 (361)
....+++.+++..-+.+.+......|.+ .+|++..+...+.....+.+++|.++.++ +.||+|.| ++++.
T Consensus 282 ~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~--l~~r~g~k~~~~l~~ 354 (477)
T PF11700_consen 282 QLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGW--LQDRFGPKTKRTLLI 354 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCchhHHHHH
Confidence 4444556666666677777777777775 67999999999999999999999999999 69999988 66544
No 123
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.41 E-value=1.5e-11 Score=105.26 Aligned_cols=232 Identities=15% Similarity=0.171 Sum_probs=145.3
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+++|++..+++.+....+...++..++.|.++||+|||+.-+..+++..+.|+. -..++++.++++|++.|++.+..+.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999999964 4568999999999999999999888
Q ss_pred HHHHHH-Hhc----CCcccccchhhHHH-HHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-ccCC
Q 018042 155 SVPLYL-SEM----APARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPET 227 (361)
Q Consensus 155 ~~~~~~-~e~----~~~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es 227 (361)
.-.+++ .|. +|++..+...+... ...++-.+.+.+++..+.+..+ .|-..+|....++.++..+.+.. -+|.
T Consensus 141 ~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~-~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 141 AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG-FGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 877764 443 22222222222222 2223333444444444433222 24467787777666666555433 4554
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHH
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAF 307 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
+....++ . +.. +..++.++.+.++ ++++........+..+.+..+..
T Consensus 220 yg~~~~~-~--~~~---------------------------~~~~~a~~~i~~d---~ril~LG~~qslFE~smy~FVfl 266 (354)
T PF05631_consen 220 YGDTSSS-S--SLS---------------------------GSFREAWRAILSD---PRILLLGLIQSLFEGSMYLFVFL 266 (354)
T ss_pred CCCcccc-c--chH---------------------------HHHHHHHHHHHcC---chhHHHHHHHHHHHHHHHHheee
Confidence 3210000 0 000 0001122333332 35555555566666565566666
Q ss_pred cHHHHHHhcCCCChhhHHHhhhhhhcccccccchhh
Q 018042 308 YAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMW 343 (361)
Q Consensus 308 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~ 343 (361)
|.|.+- ..+ ....-+.+++.+.++.++|+.+..+
T Consensus 267 WtPaL~-~~~-~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 267 WTPALD-PDD-EELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred eeceec-CCC-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 777654 111 2334677888888888888877765
No 124
>PRK09848 glucuronide transporter; Provisional
Probab=99.41 E-value=1.4e-12 Score=120.20 Aligned_cols=245 Identities=11% Similarity=0.026 Sum_probs=137.7
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh----chhHHH-HHHHHHHHHHHHHh-hh----hh--hHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF----GRKPSV-LMGGAAFLAGSALG-GA----AV--NVYMLIFG 141 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----Grr~~l-~~~~~~~~~~~~~~-~~----~~--~~~~~~~~ 141 (361)
++.+|++..++|.+.+...+..++..++.|+++||. |||+.+ ..+.+...+..++. .. .. ..+.+++.
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLT 115 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHH
Confidence 455688999999999999999999999999999996 777654 55555444444332 11 11 22334445
Q ss_pred HHHHHhhhhhhhhHHHHHHHhcCCc-ccccchhhHHHHH-----HHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHH
Q 018042 142 RLLLGVGVGFANQSVPLYLSEMAPA-RYRGAINNGFQFS-----IGIGALAANFINYGTEQIKGGWGWRVSLALAAVPAS 215 (361)
Q Consensus 142 r~l~G~~~~~~~~~~~~~~~e~~~~-~~R~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~ 215 (361)
.++.+++.+...++..++..|..++ ++|.+..+.-..+ ..++..++|.++....... ..+|.....+.+++.+
T Consensus 116 ~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~-~~~~~~~~~~~~v~~~ 194 (448)
T PRK09848 116 YMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEM-VSVYHFWTIVLAIAGM 194 (448)
T ss_pred HHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch-hhhHHHHHHHHHHHHH
Confidence 5677888888887777877777654 6788776654433 3345556666654322110 0122222222233333
Q ss_pred HHHHhc-ccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHH
Q 018042 216 ILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIP 294 (361)
Q Consensus 216 ~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (361)
+..+.. ...||+++. +. ++...+..++++++++... ...+.
T Consensus 195 ~~~~~~~~~~~e~~~~----~~------------------------------~~~~~~~~~~~l~~n~~f~----~~~~~ 236 (448)
T PRK09848 195 VLYFICFKSTRENVVR----IV------------------------------AQPSLKISLQTLKRNRPLF----MLCIG 236 (448)
T ss_pred HHHHHHHcCcEeccCC----Cc------------------------------cCCCHHHHHHHHhCCchHH----HHHHH
Confidence 322222 335554310 00 0000111344555553322 22222
Q ss_pred HHHHhcchhhhHHcHHHHHHh-cCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 295 FFQQVTGINVIAFYAPLLFRT-IGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.++............|+++++ .|.+....+.......++.+++.++.++ +.||+|+|+++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--l~~r~g~~~~~~~g 300 (448)
T PRK09848 237 ALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPG--MVARIGKKNTFLIG 300 (448)
T ss_pred HHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCcHHHHHHH
Confidence 233333334455566666654 4766555554444445666778888888 69999999887654
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.40 E-value=8.9e-12 Score=113.09 Aligned_cols=141 Identities=15% Similarity=0.110 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhc
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 163 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~ 163 (361)
.+...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....++.+.+++..++.|++.+..++.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 330 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKR 330 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45566778888899999999999999999999999888888888888888888888889999999998888888888999
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 018042 164 APARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 227 (361)
Q Consensus 164 ~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 227 (361)
+|+++|+++.++++....+|..+++.+.+.+.+. .||++.+++.++..++..+..+++++.
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 331 VPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW---FGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999988888876666543 479999998887777766665555443
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=1.4e-11 Score=110.84 Aligned_cols=148 Identities=16% Similarity=0.182 Sum_probs=120.7
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+++|.+..+.+++.+.......++.++.|++.||+|||+.+..+.++..+........++.+.+++.+++.|++.+...+
T Consensus 228 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 307 (375)
T TIGR00899 228 HELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAG 307 (375)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577888888888777777788889999999999999999888777666666666677888888889999999988888
Q ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 018042 155 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 226 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 226 (361)
....++.|..|+ +|+.+.++++....+|..+++.+.+.+.+. .+|+..|++.++..++..+...+++|
T Consensus 308 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 308 IGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAER---WSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHHHHheecC
Confidence 888999999875 567999999988889999999997776543 47999999888877777666655543
No 127
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=1.8e-11 Score=113.95 Aligned_cols=155 Identities=17% Similarity=0.124 Sum_probs=111.1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh--h-HH-HHHHHHHHHHhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--N-VY-MLIFGRLLLGVGV 149 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~-~~-~~~~~r~l~G~~~ 149 (361)
.++.|.+.....+......++..++.++.++++||+|||+.++.+.++.+++.++.+... + .+ ....+.++.+.+.
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 377 (479)
T PRK10077 298 FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF 377 (479)
T ss_pred HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 445577777667777777888899999999999999999999999998888877765432 1 11 2223344444444
Q ss_pred hhh-hhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc---ccCCCcchHHHHHhhHHHHHHHHHhcc-cc
Q 018042 150 GFA-NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE---QIKGGWGWRVSLALAAVPASILTLGAL-FL 224 (361)
Q Consensus 150 ~~~-~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~ 224 (361)
+.. .+....+++|.+|+++|+.++++......+|.++++.+...+. ...++.+|++.|++.++..++..+..+ +.
T Consensus 378 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (479)
T PRK10077 378 AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFV 457 (479)
T ss_pred hccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhcc
Confidence 432 3667899999999999999999999988888888765543332 223356788888887776666665554 46
Q ss_pred cCCh
Q 018042 225 PETP 228 (361)
Q Consensus 225 ~es~ 228 (361)
||+.
T Consensus 458 ~e~~ 461 (479)
T PRK10077 458 PETK 461 (479)
T ss_pred ccCC
Confidence 7763
No 128
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.36 E-value=5.2e-12 Score=116.36 Aligned_cols=142 Identities=9% Similarity=-0.062 Sum_probs=114.7
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh--hchhHHHHH--HHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA--FGRKPSVLM--GGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~--~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
++|.+..+.+.+.++..++..++.++.|+++|| +++|+...+ +.++.+++.++....++++.+++.+++.|++.+.
T Consensus 270 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~ 349 (455)
T TIGR00892 270 DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS 349 (455)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch
Confidence 347788999999999999999999999999997 344433333 3344445555666778888888999999999999
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHH
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 219 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 219 (361)
..+...+++.|.+|+++|++.+++++....+|.+++|.+++.+.+..+ +|++.|++.++..++..+
T Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g--~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 350 VGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK--NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC--CcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999776664432 699999888776655443
No 129
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=2.7e-11 Score=109.65 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhc
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 163 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~ 163 (361)
.+...+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+.++++.++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45556677788889999999999999999999999988888888888888888888899999999998888888899999
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 164 APARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 164 ~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
+|+++|+++.++++....+|..+++.+.+.+.+. .||++.|.+.+++.++..+..+
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS---FGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997776643 4799999988877766665544
No 130
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.35 E-value=3.4e-12 Score=114.00 Aligned_cols=247 Identities=15% Similarity=0.150 Sum_probs=170.1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh----hchh-HHHHHHHHHHHHHHHHhhhhhh------HHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRK-PSVLMGGAAFLAGSALGGAAVN------VYMLIFGR 142 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r 142 (361)
.+.+|++...+|.+..+.=+--++..|+.|.++|| |||+ +.++.+.+..++.+.++-.+++ .....+.-
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY 119 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY 119 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence 44468899999999888888889999999999996 7865 5666777888888888877663 34456668
Q ss_pred HHHHhhhhhhhhHHHHHHHhcCC-cccccchhhHHHHHHHHHHHHHHHHHhhhcccCC----CcchHHHHHhhHHHHHHH
Q 018042 143 LLLGVGVGFANQSVPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKG----GWGWRVSLALAAVPASIL 217 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~~-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~wr~~~~~~~~~~~~~ 217 (361)
.+.+++......+-.++.+|+.+ ++||.+..+.-..+..+|.++...+...+....+ ..||+...++.+++.++.
T Consensus 120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~ 199 (467)
T COG2211 120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL 199 (467)
T ss_pred HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence 89999999999999999999975 5789999999888888886555444333332221 348888888888887777
Q ss_pred HHhccc-ccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchh----hhcccCchhHHHHHHH
Q 018042 218 TLGALF-LPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFK----KIIQRKYRPQLLMAMA 292 (361)
Q Consensus 218 ~~~~~~-~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 292 (361)
.+.+++ .+|.+.. ... .+...+.+++ .+++++ .+...+
T Consensus 200 ~l~~~~~v~ER~~~---~~~------------------------------~~~~~~~~~~~~~~~~~~Nr----p~~~~l 242 (467)
T COG2211 200 LLFCFFNVKERVVE---TQP------------------------------TKTGVKLKLKDSFLLIFKNR----PLLLLL 242 (467)
T ss_pred HHHHHHHhhcccCc---ccc------------------------------CcccccccHHHHHHHHHccc----hHHHHH
Confidence 777666 6665420 000 0001122333 333442 222233
Q ss_pred HHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 293 IPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+..++...+.+.......+|.+ ..|.+.............+.+++.++... +.+|+|+|+++.++
T Consensus 243 ~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~--L~~~~gkk~~~~~~ 308 (467)
T COG2211 243 LMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPR--LVKKFGKKKLFLIG 308 (467)
T ss_pred HHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhchHHHHHHH
Confidence 3444445555555666666654 33777777777777777777777888888 79999999987665
No 131
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.33 E-value=2.1e-11 Score=112.86 Aligned_cols=150 Identities=15% Similarity=-0.006 Sum_probs=108.8
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHH--HhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSA--LGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
++++|++..+.++..+...++..++.++.|+++||+|||+.+.....+..++.. .....++.+...+.+++.|++...
T Consensus 286 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 365 (467)
T PRK09556 286 FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFG 365 (467)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Confidence 445688999999999999999999999999999999999877665444443322 222345666666778888865444
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHH-HHHHHHHHHhhhcc-cC--------CCcchHHHHHhhHHHHHHHHHhc
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGI-GALAANFINYGTEQ-IK--------GGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~-g~~~~~~~~~~~~~-~~--------~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
..........|.+|++.|+.+.++.+....+ |..++|.+.+.+.+ .. ...+|+..|++..+..++..+..
T Consensus 366 ~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 366 PQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence 3434446777999999999999999887775 76788888666665 10 03579999988766666655544
Q ss_pred cc
Q 018042 222 LF 223 (361)
Q Consensus 222 ~~ 223 (361)
++
T Consensus 446 ~~ 447 (467)
T PRK09556 446 AI 447 (467)
T ss_pred HH
Confidence 43
No 132
>PRK09952 shikimate transporter; Provisional
Probab=99.32 E-value=6e-11 Score=108.91 Aligned_cols=152 Identities=14% Similarity=0.105 Sum_probs=109.4
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh----hhhHHHHHHHHHHHHhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA----AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~r~l~G~~~~ 150 (361)
+++|.+.+..........+...++.++.|+++||+|||+++..+.++..++.+.... .++.+.+++..++.+++.+
T Consensus 279 ~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 358 (438)
T PRK09952 279 QNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHD 358 (438)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 344666665555555666677888999999999999999988887766554433322 1234445556677788888
Q ss_pred hhhhHHHHHHHhcCCcccccchhhH-HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 227 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 227 (361)
...+...++++|.+|++.|+.+.++ +..+..+|..++|.+.+.+.+..+ .+|+..+.+.++..++..+..+.++|+
T Consensus 359 ~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 359 MVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-GSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 8888889999999999999888888 445566888888988777654322 258888887777777666666666664
No 133
>PRK03699 putative transporter; Provisional
Probab=99.30 E-value=6.4e-11 Score=107.28 Aligned_cols=148 Identities=14% Similarity=0.041 Sum_probs=120.1
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+++|++..+.+.+.+.+.++..++.++.|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+..++
T Consensus 234 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 313 (394)
T PRK03699 234 KKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYT 313 (394)
T ss_pred HHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 44578899999999999999999999999999999999999888877777777766777777777778889998888888
Q ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 018042 155 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 226 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 226 (361)
...++..|..| ++++...+.......+|..++|.+.+.+.+. .||+..+++.+++.++..+...+.++
T Consensus 314 ~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 314 TIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH---FGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH---hCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 88888888776 4567778888888889999999997776653 47999988877777766665555543
No 134
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.29 E-value=5.6e-11 Score=107.19 Aligned_cols=142 Identities=15% Similarity=0.065 Sum_probs=113.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
.|.+.++.+...+...++..++.++.|++.||+|+|+++..+..+..++.+... + ........++.|++.....+..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~ 306 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVA 306 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHH
Confidence 367888889999999999999999999999999999999888887777665443 2 2334456778888877788899
Q ss_pred HHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 157 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
..++.|..|+++++...+.......+|.+++|.+++.+.+. .+|++.|.+.+.+.++..+..+..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 307 MAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN---YSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCccHHHHHHHHHHHHHHHHHHhc
Confidence 99999999988888788888888999999999998877653 479999988777776555444433
No 135
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.28 E-value=7.8e-11 Score=102.56 Aligned_cols=247 Identities=13% Similarity=0.100 Sum_probs=153.1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc-----hhHHH-HHHHHHHHHHHHHhhhh-----h--------h
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-----RKPSV-LMGGAAFLAGSALGGAA-----V--------N 134 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-----rr~~l-~~~~~~~~~~~~~~~~~-----~--------~ 134 (361)
-.|++++....+.+.+...+... ..+.+|+.||+.+ ||..+ ..|.++...+..+..++ . .
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 34567888888888887776655 5889999999999 88555 44666666665555442 2 2
Q ss_pred -HH--HHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHh--
Q 018042 135 -VY--MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLAL-- 209 (361)
Q Consensus 135 -~~--~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~-- 209 (361)
.+ ...+...+.|+|.+...+...++++|..|+|+|+++.++......+|.+++.++.+.+.+..+ .-|..-.+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s--~~rL~~v~~~ 163 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS--PERLIQVIQG 163 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC--HHHHHHHHHH
Confidence 22 334457889999999999999999999999999999999999999999998888655443322 22222222
Q ss_pred hHHHHHHHHHhcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHH
Q 018042 210 AAVPASILTLGALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLM 289 (361)
Q Consensus 210 ~~~~~~~~~~~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (361)
.+++.+...++..+-.|.+.....+ . .++++...+..+++++.++..++.+.
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~~-~---------------------------~~~~~~~f~~a~~~~~~~~~a~~f~~ 215 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRAA-A---------------------------AERPRPPFREAWRQVWASPQARRFFV 215 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCccccc-C---------------------------CCCCCccHHHHHHHHHhCCChhHHHH
Confidence 2222222222223323332100000 0 00111112334556665555555544
Q ss_pred HHHHHHHHHhcchhhhHHcHHHHH-HhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceee
Q 018042 290 AMAIPFFQQVTGINVIAFYAPLLF-RTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 356 (361)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~ 356 (361)
...+..+. +..-...+..|- +-+|++..+...++.....+..+|....++. +..|.+++++.
T Consensus 216 fl~l~t~a----~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~-l~~~~~~~~~a 278 (403)
T PF03209_consen 216 FLFLGTLA----FFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFL-LSRRLGKKRTA 278 (403)
T ss_pred HHHHHHHH----HHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCchHHH
Confidence 44333322 122222333333 3359999999999999999999999999984 44466665543
No 136
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.28 E-value=3e-11 Score=112.11 Aligned_cols=151 Identities=16% Similarity=0.097 Sum_probs=112.0
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh-----hh------hHHHHHHHHH
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AV------NVYMLIFGRL 143 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~------~~~~~~~~r~ 143 (361)
+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++..++.++.++ .+ +...+....+
T Consensus 312 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (481)
T TIGR00879 312 ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILL 391 (481)
T ss_pred HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHH
Confidence 345778888888889999999999999999999999999999988887777766652 11 2222333333
Q ss_pred HHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-c
Q 018042 144 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-L 222 (361)
Q Consensus 144 l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~ 222 (361)
+.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.. +.+|++.|++.+++.++..+.. +
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~---~~~~~~~f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 392 FIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE---SIGVGGVFIFFGGLNVLGLIFVYF 468 (481)
T ss_pred HHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCccceehhHHHHHHHHHHHHhe
Confidence 33332223345666778999999999999999999999999999988665543 2479998888887777766655 4
Q ss_pred cccCCh
Q 018042 223 FLPETP 228 (361)
Q Consensus 223 ~~~es~ 228 (361)
+.||++
T Consensus 469 ~~~~~~ 474 (481)
T TIGR00879 469 FLPETK 474 (481)
T ss_pred ecccCC
Confidence 467653
No 137
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.28 E-value=1.5e-10 Score=104.32 Aligned_cols=140 Identities=9% Similarity=0.023 Sum_probs=121.7
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
+.|.+.++.+.+.+...++..++.++.+++.||+|+|+.+.++.+...+..+..+++++.+.+++.+++.|++.+...+.
T Consensus 234 ~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~ 313 (382)
T TIGR00902 234 AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA 313 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcccccchhhHHH-HHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHh
Q 018042 156 VPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 220 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 220 (361)
...++.+. |+++|++..++++ ...++|.++++.+++.+.+.. ++ ..|+..+.+.++..+.
T Consensus 314 ~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~---g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 314 AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL---GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHHHHH
Confidence 99999998 9999999999876 577899999999988887643 55 4455666555554433
No 138
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.28 E-value=1.4e-10 Score=104.93 Aligned_cols=148 Identities=16% Similarity=0.070 Sum_probs=113.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-AVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
+|.+..+.+...+.+.++..++.++.+++.||+|||+.+..+..+..++.++... .++...+ .-++.|++.+...+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~ 312 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPL 312 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHH
Confidence 4778889999999999999999999999999999999998888777777665543 2222222 234667887777777
Q ss_pred HHHHHHhcCC-cccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCCh
Q 018042 156 VPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETP 228 (361)
Q Consensus 156 ~~~~~~e~~~-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~ 228 (361)
......+.++ +++|++..++.+....++..++|.+.+.+.+..+ +|...|.+.++..++..+.. ++.||++
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG--NYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 7777777775 5789999999999999999999999887776554 57777777666666555544 5577764
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.28 E-value=7.7e-11 Score=107.27 Aligned_cols=137 Identities=15% Similarity=0.043 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhc
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEM 163 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~ 163 (361)
.+.+.++..++..++.+..|+++||+|||+.+..+.++..++.+...+.++.+.+++.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666677788889999999999999999999999888888888777778888888999999999999999999999999
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 164 APARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 164 ~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
.|+++|++.+++......+|..++|.+++.+.+. .+|++.|++.++..++..+..++
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~---~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN---YGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh---cchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998877643 47999999888877776655543
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.28 E-value=1.2e-10 Score=106.43 Aligned_cols=149 Identities=11% Similarity=0.050 Sum_probs=123.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
+|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++..++.++..+.++.+...++.++.|++.+...+..
T Consensus 254 ~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 254 WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788899999999999999999999999999888888888888888888888888888888888999999988888888
Q ss_pred HHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHh-cccccCCh
Q 018042 157 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG-ALFLPETP 228 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~-~~~~~es~ 228 (361)
.+++.|..|++.|+++++++.....+|..+++.+.+.+.+. .|.+..+.+.+...++..++ ...+||.+
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM---MTPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH---hchhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 89999999999999999999999999999999998777654 36777777666555554443 35566654
No 141
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.28 E-value=4.6e-11 Score=107.92 Aligned_cols=138 Identities=14% Similarity=0.097 Sum_probs=106.2
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHH--HHhhh--hhhHHHHHHHHHHHHhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGS--ALGGA--AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~r~l~G~~~~ 150 (361)
+++|.+..+.+...+...++..++.++.|+++||+|||+.+..+..+..+.. +.... .++.+.+++..++.|++.+
T Consensus 248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 327 (394)
T TIGR00883 248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGG 327 (394)
T ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 3457788889999999999999999999999999999998776554443332 12222 2466777777889999988
Q ss_pred hhhhHHHHHHHhcCCcccccchhhH-HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHH
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPA 214 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~ 214 (361)
...+...+++.|.+|+++|+++.++ .+.+..+|..++|.+++.+.+..+ .|++.++......
T Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g--~~~~~~~~~~~~~ 390 (394)
T TIGR00883 328 MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG--DWYAIGYYLAALA 390 (394)
T ss_pred HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC--cchhHHHHHHHHH
Confidence 8999999999999999999999997 456677888899999877765442 3777766655443
No 142
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.27 E-value=2.1e-11 Score=113.96 Aligned_cols=136 Identities=12% Similarity=-0.062 Sum_probs=105.3
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--VNVYMLIFGRLLLGVGVGFA 152 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~ 152 (361)
+++|++..+.+++.+...++..++.++.|+++||+|||+++..+.++..++.+..... .+.+.+.+..++.+......
T Consensus 304 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (496)
T PRK03893 304 TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGI 383 (496)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhccc
Confidence 4668899999999999999999999999999999999999888877766665544332 34444444455554444444
Q ss_pred hhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHH
Q 018042 153 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVP 213 (361)
Q Consensus 153 ~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~ 213 (361)
.+..+.++.|.+|+++|++.+++......+|..++|.+++.+.+. .||+..+...+..
T Consensus 384 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~---~g~~~~~~~~~~~ 441 (496)
T PRK03893 384 SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR---LDLGTALASLSFS 441 (496)
T ss_pred chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc---CChHHHHHHHHHH
Confidence 567778899999999999999999999999999999998777653 4788777554433
No 143
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.26 E-value=1.6e-10 Score=105.84 Aligned_cols=151 Identities=11% Similarity=0.112 Sum_probs=132.0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchh--HHHHHHHHHHHHHHHHhhh--------hhhHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK--PSVLMGGAAFLAGSALGGA--------AVNVYMLIFGRL 143 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~r~ 143 (361)
++++|++..+...+.-+..+...+|++++|++.||+|.| ++++++.+++.+.++...+ ..+.+.+.+.-+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 557799999999999999999999999999999999999 8999988888777666666 678889999999
Q ss_pred HHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 144 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 144 l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
+.|+..|..++...++.+|+.|+++.+..++++....-....+||.+-+.+.+..+ +-|+.+....++.++.+++.++
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg--~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG--SQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999888887765 5777777777776666666666
Q ss_pred ccC
Q 018042 224 LPE 226 (361)
Q Consensus 224 ~~e 226 (361)
+++
T Consensus 467 v~~ 469 (477)
T PF11700_consen 467 VDV 469 (477)
T ss_pred ccc
Confidence 654
No 144
>PRK03545 putative arabinose transporter; Provisional
Probab=99.26 E-value=1.9e-10 Score=104.13 Aligned_cols=144 Identities=15% Similarity=0.078 Sum_probs=113.6
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGS-ALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
+++|.+..+.+++.+...++..++.++.|+++||+|||.... +..+..++. .+....++.+.++++.++.|++.+...
T Consensus 234 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~ 312 (390)
T PRK03545 234 QVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIG 312 (390)
T ss_pred HhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcch
Confidence 345778888999999999999999999999999999887644 444444433 334456778888888999999887777
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
+.....+.|..| ++|+++++++.....+|..+|+++++.+.+. .|++..|++.+++.++..+..++
T Consensus 313 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~---~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 313 LAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH---LGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHHHHH
Confidence 777788888876 6889999999998999999999998777643 58999998888777766655543
No 145
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.24 E-value=1.8e-10 Score=102.42 Aligned_cols=146 Identities=23% Similarity=0.260 Sum_probs=125.0
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-chhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHhhhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGFA 152 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~ 152 (361)
.+|+++++..-+.++|..-.-+.++++|+++||+ |+|+++..|.++..+|.++.+.+. +...++++-.+.++|.|..
T Consensus 55 gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~ 134 (498)
T COG3104 55 GLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLF 134 (498)
T ss_pred cCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccc
Confidence 3778999988888888888888999999999996 999999999999999999999884 7888999999999999999
Q ss_pred hhHHHHHHHhcCCccc--ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 153 NQSVPLYLSEMAPARY--RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 153 ~~~~~~~~~e~~~~~~--R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
=+...++++|.+|+++ |-...+++..+.++|+.++|++...+.. +.||...|...++-..+.++..+..
T Consensus 135 K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~---~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 135 KPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI---NYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred cccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999998764 5667888999999999999999776664 4589999988777666555544433
No 146
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.23 E-value=1.6e-10 Score=104.43 Aligned_cols=143 Identities=15% Similarity=0.064 Sum_probs=102.9
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhH--HH------HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKP--SV------LMGGAAFLAGSALGGAAVNVYMLIFGRLLLG 146 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~--~l------~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 146 (361)
+++|.+..+.+++.+...++..++.++.|+++||+|||+ .. ..+.++..+........++.+..+....+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (399)
T TIGR00893 244 QERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGF 323 (399)
T ss_pred HHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 345778888999999999999999999999999999996 11 1111111222222222334444444445555
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcc-hHHHHHhhHHHHHHHHHhc
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWG-WRVSLALAAVPASILTLGA 221 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-wr~~~~~~~~~~~~~~~~~ 221 (361)
.+.+ ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+. .+ |+..+++.++..++..+..
T Consensus 324 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 324 FGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT---TGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC---CCchhHHHHHHHHHHHHHHHHH
Confidence 5544 7888999999999999999999999999999999999997766543 35 8888888777666555443
No 147
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.21 E-value=3.9e-10 Score=105.47 Aligned_cols=140 Identities=23% Similarity=0.097 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHhhhhhhhhHHHHHHHhcC
Q 018042 89 SSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN----VYMLIFGRLLLGVGVGFANQSVPLYLSEMA 164 (361)
Q Consensus 89 ~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~ 164 (361)
.+..++..++.++.++++||+|||+.++++.++.+++.++.++..+ ...+...-+...++.....+....+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3445566778899999999999999998888777777665554321 111111111112222223456677789999
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHhhhcccCC-------CcchHHHHHhhHHHHHHHHHhcccccCCh
Q 018042 165 PARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-------GWGWRVSLALAAVPASILTLGALFLPETP 228 (361)
Q Consensus 165 ~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 228 (361)
|++.|+++.++.+....+|.++++.+...+.+..+ +.++...|++.+++.++..+..+++||+.
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCC
Confidence 99999999999999999999999988665544211 23455667776666666655556789974
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.21 E-value=1.9e-10 Score=104.43 Aligned_cols=133 Identities=17% Similarity=0.023 Sum_probs=106.8
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSA-LGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
+++|++..+.+++.+...++..++.++.|+++||+|||+.+..+.++..+..+ .....++.+.+.++.++.|++.+...
T Consensus 267 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
T TIGR00891 267 ADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIW 346 (405)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccch
Confidence 34578899999999999999999999999999999999998888776533332 33344566667777778887777777
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHh
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLAL 209 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~ 209 (361)
+....++.|.+|+++|++++++.+....+|..++|++.+.+.+..+ .|+..+..
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g--~~~~~~~~ 400 (405)
T TIGR00891 347 GILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD--EYGTALAS 400 (405)
T ss_pred hhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc--ccchhHHh
Confidence 8888999999999999999999999999999999999887776432 26655543
No 149
>TIGR00898 2A0119 cation transport protein.
Probab=99.21 E-value=5.7e-10 Score=104.58 Aligned_cols=136 Identities=20% Similarity=0.104 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHHhhhhhhhhHHHHHHHhcCC
Q 018042 88 TSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNV--YMLIFGRLLLGVGVGFANQSVPLYLSEMAP 165 (361)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~ 165 (361)
.....+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+.+|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344456677888999999999999999999999988888877776544 445555677777777888889999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 018042 166 ARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETP 228 (361)
Q Consensus 166 ~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 228 (361)
++.|+.++++.+....+|.+++|.+.. +.. .++...+++.++..++..+..+++||+.
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE----KWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH----HHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 999999999999999999999999876 322 2566777777777777767677788874
No 150
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.20 E-value=2.8e-11 Score=107.03 Aligned_cols=242 Identities=18% Similarity=0.143 Sum_probs=130.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHH--HHHHHH-hhhh----hhHH-HHHHHHHHHHhh
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAF--LAGSAL-GGAA----VNVY-MLIFGRLLLGVG 148 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~--~~~~~~-~~~~----~~~~-~~~~~r~l~G~~ 148 (361)
-|++.+++|.+.++..+...+.+++.|.++||+|.||-++....+. ..+... ..+. .|.+ ..+++-+..|++
T Consensus 38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~ 117 (412)
T PF01306_consen 38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV 117 (412)
T ss_dssp H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999776554433222 222222 2222 2222 233334444555
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-ccCC
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPET 227 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~es 227 (361)
.....+..-+++.++. ++.+.=.|-.-...++|.+++..+++.+... +-+..||+.....++..++.++ -|+.
T Consensus 118 f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i----~p~~~fwi~s~~~~il~lll~~~~~~~ 191 (412)
T PF01306_consen 118 FNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI----NPNIIFWIASAAAIILLLLLLLLKPDV 191 (412)
T ss_dssp TTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHSS---S
T ss_pred HcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee----CccHHHHHHHHHHHHHHHHHHHcCCcC
Confidence 5555566666655543 2223344445566677777777776655532 3567777766655555544433 3343
Q ss_pred hhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchh---hhcccCchhHHHHHHHHHHHHHhcchhh
Q 018042 228 PNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFK---KIIQRKYRPQLLMAMAIPFFQQVTGINV 304 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
++.....+. +.+++++.+.+ ++++.+ +.+. +.+......+.+..
T Consensus 192 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~l~k~~---~fw~-~~l~v~g~~~~Y~v 238 (412)
T PF01306_consen 192 PPQAEVADA-----------------------------LGAKKDKVSLKDVLSLFKMR---NFWF-FVLFVIGVAAIYDV 238 (412)
T ss_dssp SSSS-SSTT-----------------------------SSS------HHHHHHHTTSH---HHHH-HHHHHHHHHHHHHH
T ss_pred chhhhhhcc-----------------------------cccCCCCCcHHHHHHHhcch---hHHH-HHHHHHHHHHHHHH
Confidence 321111110 00011111223 344442 2222 22222222233455
Q ss_pred hHHcHHHHHHhc----CCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 305 IAFYAPLLFRTI----GLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 305 ~~~~~~~~~~~~----g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.....+.|+... +.+....+.+.+.-.+..++...+..+ +.+|+|.|+.++++
T Consensus 239 fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~--li~rig~k~~Llla 295 (412)
T PF01306_consen 239 FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPW--LINRIGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHH--HHHhcChHhHHHHH
Confidence 555566666544 334456677788888888888888888 69999999877653
No 151
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.20 E-value=6.7e-10 Score=92.14 Aligned_cols=153 Identities=17% Similarity=0.164 Sum_probs=115.1
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-------VNVYMLIFGR 142 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~r 142 (361)
.|++++.+|.|.+|...+.++-.+|..+| ++.|.+.|++|.+.++.+|.+...+|..+...+ .++|.+.+..
T Consensus 25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~ 103 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFL 103 (250)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHH
Confidence 56678889999999999999999999875 888999999999999999999999998877653 4677887778
Q ss_pred HHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 143 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
++.|.+.+...+.+.....+.|| ++||++.++.-...+++..+-..+...+-.. ..-+..+.....+.++..+..+
T Consensus 104 ~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~---~~~~fll~la~~~~~v~l~~~~ 179 (250)
T PF06813_consen 104 FLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD---DPSSFLLFLAVLPAVVCLVAMF 179 (250)
T ss_pred HHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHHHhh
Confidence 88888877777777777778887 5899999999999999887665553333221 2334444444444444444445
Q ss_pred cccCC
Q 018042 223 FLPET 227 (361)
Q Consensus 223 ~~~es 227 (361)
+++..
T Consensus 180 ~vr~~ 184 (250)
T PF06813_consen 180 FVRPV 184 (250)
T ss_pred heecc
Confidence 55443
No 152
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.19 E-value=3.9e-10 Score=98.11 Aligned_cols=249 Identities=15% Similarity=0.084 Sum_probs=162.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHH-HHHHHHHHHHHHHhhhhhh--H-HHHHHHHHHHHhhhhhhhhH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSV-LMGGAAFLAGSALGGAAVN--V-YMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l-~~~~~~~~~~~~~~~~~~~--~-~~~~~~r~l~G~~~~~~~~~ 155 (361)
+.+..+...++..+..++-.|+.|.++|+.|+||.. -....+..++.+...++++ + +..++.-.+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 456678888888999999999999999999976554 4455556666666666654 4 44555578888888888899
Q ss_pred HHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhccc---------------CCCcchHHHHHhhHHHHHHHHH-
Q 018042 156 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI---------------KGGWGWRVSLALAAVPASILTL- 219 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------~~~~~wr~~~~~~~~~~~~~~~- 219 (361)
..+++.+..++++-++..+.-.....+|+++.-+........ .+...-|..+.+.++.-++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 999999999988877777665544455554443332111110 1233567777666655554443
Q ss_pred hcccccCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHh
Q 018042 220 GALFLPETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQV 299 (361)
Q Consensus 220 ~~~~~~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (361)
.++..|+.++.. . + +++.. .... ++.+.++++..+++ .+..+.+..+...
T Consensus 216 m~~~v~~~~~~~----~-~-~~~~l----------~~g~----------k~L~~t~k~i~~~~----~i~~FLiA~~~~~ 265 (438)
T COG2270 216 MILNVHDAEKIS----S-P-PPTAL----------RNGF----------KELKSTFKEIRGRK----NLVLFLIARFFYI 265 (438)
T ss_pred HHhccccccccc----c-c-chHHH----------HHHH----------HHHHHHHHHHhccc----chHHHHHHHHHHH
Confidence 334465554210 0 0 00000 0000 11123444544332 3334445555555
Q ss_pred cchhhhHHcHHHHHH-hcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecccC
Q 018042 300 TGINVIAFYAPLLFR-TIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 360 (361)
Q Consensus 300 ~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~~ 360 (361)
-+.+.+......+-. ++|++..+...+.....+.+++|+++.|+ +.||+|.|+++..++
T Consensus 266 DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~--Ld~rfg~k~vl~~~l 325 (438)
T COG2270 266 DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGF--LDERFGSKPVLMIGL 325 (438)
T ss_pred hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCceeehHHH
Confidence 677778888888876 77999999999999999999999999999 799999999887664
No 153
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.18 E-value=4e-10 Score=98.06 Aligned_cols=152 Identities=19% Similarity=0.164 Sum_probs=135.3
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
.+++|++..+..++.....+..++|+++.|+|.||+|-|+++..+.++..+.++..-+......+.++-++.|...|..+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 45789999999999999999999999999999999999999999999999999988888777778888999999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 227 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 227 (361)
....+|.++..|+++-++.+++++...-.++.+||.+-..+.+..+ +-|..+....++..+..+..+..|+.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg--~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG--SSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc--chhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999999999999999999999999999999999888887766 57777777666666666666667654
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.18 E-value=7.1e-10 Score=100.76 Aligned_cols=144 Identities=15% Similarity=0.116 Sum_probs=108.3
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHH-HHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVL-MGGAAFLAGSALGGA-----AVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~ 149 (361)
++|.+..+.+.+.+...++..++.++.|+++||+|||+.+. .+.+...++.+.... .++.+.+++..++.|++.
T Consensus 251 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~ 330 (402)
T TIGR00897 251 ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFL 330 (402)
T ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHH
Confidence 35778888888888999999999999999999999988764 333333333333222 245666777888899888
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
+...+ ....+.|..| ++|+++.++.+....+|..++|.+.+.+.+. .||+..+++.+++.++..+...|+
T Consensus 331 ~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~---~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 331 AGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF---FGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchHHHHHHHHHHHHHHHHHHHHh
Confidence 76544 4556677655 6899999999999999999999997776654 479999988887777766655544
No 155
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.16 E-value=2.4e-10 Score=105.98 Aligned_cols=146 Identities=14% Similarity=0.060 Sum_probs=103.4
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchh-------HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK-------PSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGV 147 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 147 (361)
+++|++..+.+.+.+...++..++.++.|+++||+||| ....+..++.++..++....++.+..++.-++.++
T Consensus 281 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~ 360 (476)
T PLN00028 281 DRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSI 360 (476)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 44588889999999999999999999999999999875 23333344444444455556666655556666677
Q ss_pred hhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccccc
Q 018042 148 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 225 (361)
Q Consensus 148 ~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 225 (361)
+.+...+...+++.+..| ++|+...++...+..+|..+++.+-. ..+..+|+..|++.+++.++..+..++++
T Consensus 361 ~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~----~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 361 FVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF----TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH----hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 666666666666777654 78999999988877788877776622 22234699999888877777666665554
No 156
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.15 E-value=3.4e-09 Score=95.83 Aligned_cols=151 Identities=16% Similarity=0.190 Sum_probs=111.6
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh----hH--H---HHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV----NV--Y---MLIFGRLL 144 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~----~~--~---~~~~~r~l 144 (361)
-++-|++.++..+.+....+...+..+++..+.||+|||+.++.+..++.+..++..... .. | ..+++.++
T Consensus 297 ~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 297 FKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFL 376 (485)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 344488999999999999999999999999999999999999999999888888776541 11 1 12344444
Q ss_pred HHhhhhhh-hhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-c
Q 018042 145 LGVGVGFA-NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-L 222 (361)
Q Consensus 145 ~G~~~~~~-~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~ 222 (361)
..++.+.. .|...-+.+|.+|++.|+.++++......+...+-...-..+.+..+ - +.|++..+++.+..+.. .
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g---~-~~filF~i~~~~~~i~~~~ 452 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG---P-YVFILFVIPLAIFLIYLYR 452 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c-hhhHHHHHHHHHHHHHHHH
Confidence 44444433 56677889999999999999999888888877665555444444332 2 66667777776666655 4
Q ss_pred cccCCh
Q 018042 223 FLPETP 228 (361)
Q Consensus 223 ~~~es~ 228 (361)
.+|||.
T Consensus 453 ~lPETk 458 (485)
T KOG0569|consen 453 YLPETK 458 (485)
T ss_pred hCcccC
Confidence 599984
No 157
>TIGR00895 2A0115 benzoate transport.
Probab=99.15 E-value=2.5e-10 Score=103.28 Aligned_cols=120 Identities=12% Similarity=0.057 Sum_probs=99.1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
.+++|.+.++.+...+...++..++.++.|+++||+|||+.+....+......++.....+.+.+++..++.|++.+...
T Consensus 277 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 356 (398)
T TIGR00895 277 MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQ 356 (398)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 34457788889999999999999999999999999999955444444333333333335677777888999999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhh
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYG 193 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 193 (361)
+....++.|.+|+++|+++.++......+|..++|.+.+.
T Consensus 357 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 357 SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999998654
No 158
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.12 E-value=1.9e-09 Score=99.51 Aligned_cols=145 Identities=13% Similarity=0.044 Sum_probs=96.1
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh--chhHHH-HHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF--GRKPSV-LMGGAAFLAGSALGGA--AVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~ 149 (361)
++.|++..+.+.....+.++..++.++.|+++||+ |||+.. .....+..++.+...+ ..+.+..+++.++.|.+.
T Consensus 282 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 361 (452)
T PRK11273 282 EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLI 361 (452)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHH
Confidence 33477888888888888899999999999999999 555433 2222333333332222 234444445555555543
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHH-HHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGAL-AANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
.........+..|.+|++.|+++.++.+....+|.. .+|.+.+.+.+. .||+..|++.++..++.++...
T Consensus 362 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~---~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 362 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH---hcchHHHHHHHHHHHHHHHHHH
Confidence 333333445678999999999999999887777754 467776665543 4799999887776666655443
No 159
>PRK10504 putative transporter; Provisional
Probab=99.11 E-value=1.6e-09 Score=100.69 Aligned_cols=120 Identities=13% Similarity=0.008 Sum_probs=99.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHhhhhhhh
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA---VNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~ 153 (361)
+|.+..+.++......++..++.++.+++.||+|||+++..+.++..++..+..+. ++.+.+.+..++.|++.+...
T Consensus 292 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 371 (471)
T PRK10504 292 LGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRF 371 (471)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence 46788888988888888888899999999999999999999888887776665553 334444556778888888888
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
+....++.+..|+++|+.+.++.+....+|..+++.+++.+..
T Consensus 372 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 372 SSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999998888888766543
No 160
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.11 E-value=2.5e-09 Score=96.52 Aligned_cols=136 Identities=13% Similarity=0.053 Sum_probs=112.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
.|.+..+.+.+.+...++..+..++.+++.||+|+|+.+..+.+..+++.+..+..++.+.+++..++.|++.+...+..
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 314 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 47788889999998888999999999999999999999999999988888888888999999999999999999988999
Q ss_pred HHHHHhcCCcccccchhhHHH-HHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHH
Q 018042 157 PLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 217 (361)
..++.+. +++++++..+.+. ....+|..+++.+++.+.+.. ++ ..++..+++.++.
T Consensus 315 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~---g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 315 MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL---GA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cH-HHHHHHHHHHHHH
Confidence 9998887 5566788888775 566778889999988777544 45 3455555554443
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.10 E-value=1.1e-09 Score=97.91 Aligned_cols=120 Identities=13% Similarity=0.021 Sum_probs=108.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhh-HHHHHHHHHHHHhhhhhhhhH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN-VYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l~G~~~~~~~~~ 155 (361)
+|.+..+.+...+...++..++.++.+++.||+|||+.+..+..+.+++..+..+.++ .+.+++..++.|++.+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 321 (365)
T TIGR00900 242 LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVP 321 (365)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4778889999999999999999999999999999999999888888888887777774 888888999999999999999
Q ss_pred HHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 156 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
...++.|.+|+++|++..++.+....+|..+++.+++.+.+
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 322 QGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998776653
No 162
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.10 E-value=2.4e-09 Score=99.59 Aligned_cols=150 Identities=11% Similarity=0.052 Sum_probs=112.4
Q ss_pred ccccCCchhHHHHHH-HHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHh---hhh-hhHHHHHHHHHHHHhhh
Q 018042 75 NYCKFDSQLLTSFTS-SLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAA-VNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~r~l~G~~~ 149 (361)
+++|++.++.++... ...++..++.++.|+++||+|+|+.+.++.++..+..+.. +.. ++.+.+.+.-++..++.
T Consensus 251 ~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~ 330 (491)
T PRK11010 251 RGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCG 330 (491)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 345889999999874 5568999999999999999999988877666555444322 232 35555555566666666
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 227 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 227 (361)
|...+...++..+..+++.+++..++.+....+|..+++.+.+.+.+. .||+..|.+.++..++..+...+++++
T Consensus 331 g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~---~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 331 GMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA---HGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666677788899999999999999999998999988777776666543 479999988888887776666555543
No 163
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.10 E-value=2.9e-09 Score=97.70 Aligned_cols=149 Identities=13% Similarity=0.017 Sum_probs=92.5
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh--h--hhhHHHHHHHHHHHHhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG--A--AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~~r~l~G~~~~ 150 (361)
+++|.+..+.+...++..++..+++++.|+++||+|||+.+.++.++..+..+... . .++....+..-.+.+.+.+
T Consensus 272 ~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (432)
T PRK10406 272 NTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVS 351 (432)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 34577888888888888888889999999999999999988776655433332211 1 1233322222222333334
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHH-HHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIG-IGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 226 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 226 (361)
...+....+++|++|++.|+.+.++.+.... +.....|.+...+.. . ..|...+++.++..++..+..+++++
T Consensus 352 ~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~--g~~~~~~~~~~~~~~i~~~~~~~l~~ 425 (432)
T PRK10406 352 FYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-I--GMETAFFWYVTLMAVVAFLVSLMLHR 425 (432)
T ss_pred HHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-h--CCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 4445667889999999999999999765433 333346666554432 1 13555666555555555555455443
No 164
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.09 E-value=1.2e-08 Score=93.74 Aligned_cols=117 Identities=22% Similarity=0.243 Sum_probs=97.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHhhhhhhhhHHHH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIFGRLLLGVGVGFANQSVPL 158 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~ 158 (361)
+..+.+++.+...++..++.++.++++||+|+|+++..+.++.+++.+...+. .+.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777788889999999999999999999999999988888887776665 45667777788999999999999999
Q ss_pred HHHhcCC-------cccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 159 YLSEMAP-------ARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 159 ~~~e~~~-------~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
+++|..+ ++.+|...++.+....+|..+++.+.+.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 4567889999999999999999888776654
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.09 E-value=1.5e-09 Score=99.49 Aligned_cols=120 Identities=13% Similarity=0.050 Sum_probs=89.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh--hhhhhhH
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG--VGFANQS 155 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~--~~~~~~~ 155 (361)
|.+.++.+...+...++..++.++.|++.||+|||+.+..+.++..++.+.....++.....+.-++.|++ .....+.
T Consensus 262 g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (426)
T PRK12307 262 GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGL 341 (426)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHH
Confidence 66788888888999999999999999999999999999888877766655444332221122222333332 2233455
Q ss_pred HHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhccc
Q 018042 156 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI 197 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 197 (361)
.+.++.|.+|+++|++++++......+|..++|.+.+.+.+.
T Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 342 VPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 667889999999999999999988899999999997777643
No 166
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.09 E-value=1.9e-09 Score=99.93 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=125.2
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+++|.+....|++.+.+.+|..+|+++.+.+.+|+++++.+..+.++++++.+..+++++.+...+..++.|++......
T Consensus 247 ~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~ 326 (524)
T PF05977_consen 247 DVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANS 326 (524)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHh
Q 018042 155 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 220 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 220 (361)
...+.+.+..|++.||++++++......+..+|..+.+.+.+. .|-+..+.+.++..++..++
T Consensus 327 ~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~---~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 327 SLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH---FGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998888888888887777754 36787877766554444433
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.08 E-value=3.6e-09 Score=95.95 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=116.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHH
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 157 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 157 (361)
+.+....+...+...+...++.+..+++.||+|||+.+.++.++.++...+...+++.+.+++.+++.|++.+.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 33556778888888888899999999999999999999999998888888878888999999999999999877777777
Q ss_pred HHHHhcCCcccccchhhH-HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHh
Q 018042 158 LYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 220 (361)
Q Consensus 158 ~~~~e~~~~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 220 (361)
.+..+..+++.++...+. ++....+|..+++.+++.+.+. .||+..|.+.+++.++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~---~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS---IGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh---cccHHHHHHHHHHHHHHHHH
Confidence 788888888888887766 6788899999999997777654 37999998877776665543
No 168
>PRK15075 citrate-proton symporter; Provisional
Probab=99.07 E-value=5.8e-09 Score=95.78 Aligned_cols=123 Identities=15% Similarity=0.045 Sum_probs=88.5
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHH-h---hhhhhHHHHHHHHHHHHhhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL-G---GAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
.+|++..+.++......++..++.++.|+++||+|||+.+..+.++..+.... . ...+++..+.+..++.|++.+.
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (434)
T PRK15075 268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGS 347 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 35778888888888888999999999999999999999987765544332211 1 1223444444556666777777
Q ss_pred hhhHHHHHHHhcCCcccccchhhHH-HHHHHHHHHHHHHHHhhhcccC
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGF-QFSIGIGALAANFINYGTEQIK 198 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~ 198 (361)
..+....++.|.+|+++|+.+.++. +.+..++..++|.+.+.+.+..
T Consensus 348 ~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 348 YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 7777778899999999999999985 4444555667787766665543
No 169
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.07 E-value=1.3e-09 Score=98.89 Aligned_cols=241 Identities=14% Similarity=0.144 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh--hhhhhhHHHHHHHhcCCcc
Q 018042 90 SLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG--VGFANQSVPLYLSEMAPAR 167 (361)
Q Consensus 90 ~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~--~~~~~~~~~~~~~e~~~~~ 167 (361)
...+...+.++..|.++||||||..+....+...+..+...+.. +|.+ + +.|+. .+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~-~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFF-L---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHh-h---hcccccchhhhhhhhhhheeeccchh
Confidence 34567788999999999999999999999998888888777766 3333 3 33332 3455678889999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCChhHHHhhCCCHHHHHHHHH
Q 018042 168 YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPETPNSLIQRKSDHQKAKLMLQ 246 (361)
Q Consensus 168 ~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es~~~~~~~~~~~~~~~~~~~ 246 (361)
+|....++.......+..++|.++....+. .+.-..|.+..+..++..+.. .++||+.....+. ++ . ..
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~---~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~-----~~-~-~~ 214 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKF---LGIALVFLIAAASGILSLLYMLLFLPESLQEKERS-----DA-T-LR 214 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHHHHhhccccccCccccc-----cc-c-cc
Confidence 999999999999999999999998877765 357777888877777776665 5589984211000 00 0 00
Q ss_pred HhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchhhhHHcHHHHHH-hcCCCChhhHH
Q 018042 247 RVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGINVIAFYAPLLFR-TIGLGRLKVCQ 325 (361)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~ 325 (361)
+..... .........++...+...++..+.......+..........-..+++++ ..|++..+.+.
T Consensus 215 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~ 281 (463)
T KOG2816|consen 215 ELTPGS-------------LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSD 281 (463)
T ss_pred ccCCCc-------------ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHH
Confidence 000000 0000001111111111111222222222222221111111112233443 55999999998
Q ss_pred HhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 326 LSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 326 ~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
+.+.....+.++.++.... +...+|.|++...|
T Consensus 282 ~~~~~~~~~~i~~l~~~~~-l~~~l~~~~~i~lG 314 (463)
T KOG2816|consen 282 LLSLVSILGIISQLLLLPL-LSSILGEKRLISLG 314 (463)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhhhhHhhHH
Confidence 9888888889998888864 67777877755544
No 170
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.07 E-value=3.4e-09 Score=93.50 Aligned_cols=265 Identities=12% Similarity=0.097 Sum_probs=167.9
Q ss_pred ccCCchhHH-HHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 77 CKFDSQLLT-SFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 77 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
.|++.+++. -+.-...-.++...++...+.|..+.|++++++.+...+...+..+.++...+-+..+..|++.+. ...
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHH
Confidence 577877765 455666667788889999999999999999999999999999999999999999999999998765 667
Q ss_pred HHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhC
Q 018042 156 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRK 235 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~ 235 (361)
..+|+-...|+++-.++.+...+...+|..++.++|..+... ++.+.+....+......+.++..+++|..++...-++
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~-~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r 192 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF-GGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHR 192 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceec
Confidence 888998889998888889888888888888888887766653 3346777777766666666666677887765443333
Q ss_pred CCHHHHHHHHHHhhCCcchHHHHHHHHHHHh-hhhhcccchhhhc---ccCchhHHHHHHHHHHHHHhcchhhhHHcHHH
Q 018042 236 SDHQKAKLMLQRVRGTNDVEAEFDDLLKASS-TAKTINHPFKKII---QRKYRPQLLMAMAIPFFQQVTGINVIAFYAPL 311 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (361)
+..++.+....+....++.++..++.++..+ .....+..++.++ ++..+.+.++...+.+....++++-+..|...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~ 272 (412)
T PF01770_consen 193 KPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQS 272 (412)
T ss_pred cCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2111111000000000000000000000000 0000011111221 22233355555666666677777777777777
Q ss_pred HHHhc---CCCChhhHHHhhhhhhcccccccchhh
Q 018042 312 LFRTI---GLGRLKVCQLSKWIECGGSIGFGRNMW 343 (361)
Q Consensus 312 ~~~~~---g~s~~~~~~~~~~~~~~~~~g~~~~~~ 343 (361)
..++. +-...-.|.+-+...+.+.++.+..|.
T Consensus 273 LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~ 307 (412)
T PF01770_consen 273 LWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGY 307 (412)
T ss_pred HHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhH
Confidence 77666 223334455555556666666666666
No 171
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.04 E-value=2.4e-09 Score=110.26 Aligned_cols=140 Identities=14% Similarity=0.087 Sum_probs=116.9
Q ss_pred ccccCCch-hHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 75 NYCKFDSQ-LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
+.+|.+.. +.+++.+...++.+++.++.|+++||+++++.+.++.++.+++.++..+..+.+.++++.++.|++.+...
T Consensus 261 ~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 340 (1146)
T PRK08633 261 EVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFI 340 (1146)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh
Confidence 34577888 89999999999999999999999999999999999988888888888888888888889999999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHH
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASI 216 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~ 216 (361)
+...+++.+..|++.|++++++.+....+|.++++.++..+... ..++...+++.+.+.++
T Consensus 341 ~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 341 VPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL--GLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh--ccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888777776655431 13565566555544433
No 172
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.02 E-value=1.2e-08 Score=92.34 Aligned_cols=141 Identities=14% Similarity=0.027 Sum_probs=105.8
Q ss_pred cccCCchhHHHHHHHHH-HHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh------hhhHHHHHHHHHHHHhh
Q 018042 76 YCKFDSQLLTSFTSSLY-VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA------AVNVYMLIFGRLLLGVG 148 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~r~l~G~~ 148 (361)
|.|++.++.+++..... ....++.++.|++.||+|+|+.+..+.++..+..+.... .++...+.....+.+++
T Consensus 237 ~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
T TIGR02718 237 DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI 316 (390)
T ss_pred hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence 35889999999888776 466778999999999999999998877665333322221 22334444555666777
Q ss_pred hhhhhhHHHHHHHhcCCc-ccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHH
Q 018042 149 VGFANQSVPLYLSEMAPA-RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTL 219 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~-~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~ 219 (361)
.+...+.....+.+..++ +++++.+++.+....+|..+++.+++.+.+. .|++..|...+++.++..+
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~---~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR---FGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHHHHHHHHH
Confidence 777777888887777776 7899999999999999999999998877654 3788888887776655443
No 173
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.02 E-value=7.6e-09 Score=90.89 Aligned_cols=149 Identities=10% Similarity=0.052 Sum_probs=120.8
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIFGRLLLGVG 148 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~ 148 (361)
.|.+++..|++.+..++..-.+.++..+|..+.|++.|| +.|+.+.....+..+..+...+. .+.+..++.-++.|+.
T Consensus 235 ~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 235 RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 444566679999999999999999999999999999999 99999888877777776666554 5556666667778887
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
.+.........+++ ..++.+..+.+++...+++|..+|..+++.+.+. .|+....++.++..++.....+.
T Consensus 314 ~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~---~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 314 FSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA---LGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred hhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666677 4467899999999999999999999998887754 58999999988888777766544
No 174
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.00 E-value=4.5e-09 Score=96.47 Aligned_cols=145 Identities=17% Similarity=0.104 Sum_probs=99.0
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh--ch-hHHHHH---HHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF--GR-KPSVLM---GGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 148 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Gr-r~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 148 (361)
+++|++..+.+...+.+.++..++.++.|+++||+ ++ |+.... +.++..+...... ..+.....+..+..|++
T Consensus 272 ~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~ 350 (434)
T PRK11663 272 ETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFF 350 (434)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHH
Confidence 45688888999999999999999999999999999 33 332222 2222222222222 22333333344445544
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
...........+.|.+|+++|++++++.+....+|..++|.+.+.+.+ +.||+..|++.+++.++..+..++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~---~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 351 VFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE---IWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH---hcccHHHHHHHHHHHHHHHHHHHH
Confidence 332233345667899999999999999999999999999998766654 357999998888877776655543
No 175
>PRK09848 glucuronide transporter; Provisional
Probab=98.99 E-value=3.6e-08 Score=90.92 Aligned_cols=119 Identities=12% Similarity=0.051 Sum_probs=94.7
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHhhhhhhhh
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+|.+....++......++..++.++.+++.||+|+|+++.++.++..++.++..+.+ +.+.+++..++.|+|.+...+
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~ 338 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMT 338 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 454555444444445677888999999999999999999999988888877776643 667777778899999999999
Q ss_pred HHHHHHHhcCCcc-------cccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 155 SVPLYLSEMAPAR-------YRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 155 ~~~~~~~e~~~~~-------~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
...++.+|..|.+ ++|...++.+....+|..+++.+.+.+.
T Consensus 339 ~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988754 3588889999999899988888766554
No 176
>PRK10054 putative transporter; Provisional
Probab=98.99 E-value=6.5e-09 Score=94.17 Aligned_cols=147 Identities=11% Similarity=0.036 Sum_probs=111.5
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
+.+....+.+.+...+......++.|.+.||+++|+.+..++.+..++.+...++ ++.+.+.+..++.|++.+...+..
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~ 319 (395)
T PRK10054 240 DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGE 319 (395)
T ss_pred chHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 4456677777777777777778899999999999999999988888887777664 567777778899999998888888
Q ss_pred HHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc-cccCCh
Q 018042 157 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL-FLPETP 228 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~-~~~es~ 228 (361)
..++.+..|++.|+.+.+..+ ...+|..+||.+++.+.+. .|.+..|++.+....+..+..+ -..|.|
T Consensus 320 ~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 320 YMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT---LPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH---cChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 899999999999999888655 4557999999998877754 3666677665444443333332 244443
No 177
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.98 E-value=5.8e-09 Score=85.84 Aligned_cols=146 Identities=13% Similarity=0.048 Sum_probs=110.9
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHH-HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGA-AFLAGSALGGAAVNVYMLIFGRLLLGVGVGFA 152 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~ 152 (361)
++.||+|+...+.+.+....-.++.+++.|.++||+|++...+.+.+ ...++-....+ +.+.=..+..+.|+..+..
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysll 369 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLL 369 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHH
Confidence 67789999999999999999999999999999999999977666544 44444444433 3333345667788888777
Q ss_pred hhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc
Q 018042 153 NQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 153 ~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
.......++...|+++-|++.+..+...++|..+-+++++.+....+.+.|--.|.+......+..+..
T Consensus 370 AcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgi 438 (459)
T KOG4686|consen 370 ACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGI 438 (459)
T ss_pred HHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 777788888899999999999999999999999999999888876665566555554433333333333
No 178
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.96 E-value=1.3e-08 Score=92.30 Aligned_cols=140 Identities=12% Similarity=0.039 Sum_probs=106.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHH-hhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTR-AFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPL 158 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 158 (361)
++.+.+++.+...++...+..+.+++.| |++.++.+..+.++..++.++.+.+++++.+.+..++.+++.+...+...+
T Consensus 241 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~ 320 (400)
T PRK11646 241 SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARET 320 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHH
Confidence 5567788777777766655556666665 466677777888888888888888888888877888899998888889999
Q ss_pred HHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcch-HHHHHhhHHHHHHHHH
Q 018042 159 YLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGW-RVSLALAAVPASILTL 219 (361)
Q Consensus 159 ~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w-r~~~~~~~~~~~~~~~ 219 (361)
++.|..|+++|++++++.+....+|..++|.+++.+.+..+..+. ...++..++..++..+
T Consensus 321 ~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 321 LSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888765432232 3444444444444433
No 179
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.95 E-value=3.8e-08 Score=89.56 Aligned_cols=139 Identities=13% Similarity=0.040 Sum_probs=104.6
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~ 149 (361)
+++|.+..+.++......++..++.++.++++||+|+|+.+.++.++..++.++.... .+.+.++++.++.|++.
T Consensus 244 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 323 (406)
T PRK15402 244 SGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGI 323 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 3457788888888887888889999999999999999999998888777777666543 35666777888999998
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHH
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~ 217 (361)
+...+........ .++++|++..+.++....+|..+|+.++..+... .++....+..++..++.
T Consensus 324 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 324 GLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG---GGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccC---CchHHHHHHHHHHHHHH
Confidence 8877766665544 3458899999999999999999999887665543 34555444444443333
No 180
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.94 E-value=1.8e-08 Score=90.04 Aligned_cols=122 Identities=16% Similarity=0.003 Sum_probs=95.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-chhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
.|.+..+.+.+.+...++..+++++.|++.||+ +||+.+..+.++..++.+...+.++..... .-++.|++.+...+.
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPL 305 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHH
Confidence 477888999999999999999999999999999 567777778787877777666655443332 456789999888888
Q ss_pred HHHHHHhcCC-cccccchhhHHHHHHHHHHHHHHHHHhhhcccCC
Q 018042 156 VPLYLSEMAP-ARYRGAINNGFQFSIGIGALAANFINYGTEQIKG 199 (361)
Q Consensus 156 ~~~~~~e~~~-~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (361)
....+.+..+ +++++...++.+....+|..++|.+.+.+.+..+
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777766554 4567888888888888888899988877776544
No 181
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.93 E-value=5.7e-08 Score=84.75 Aligned_cols=131 Identities=11% Similarity=0.047 Sum_probs=101.5
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
.+|++.++.+...+.+..+..+|.++.+++.||+|+|+.+.++.++..++.++....++... ..+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999998888888877766655544333 34566889999999999
Q ss_pred HHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHH
Q 018042 156 VPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAV 212 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~ 212 (361)
..+...+..|++ .+.+.++. ....+|..+.|++.+.+.+. .|.+..+++..+
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~---~g~~~a~~v~~~ 302 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADC---LGIQLAFALPVP 302 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHh---ccchHHHHHHHH
Confidence 999998888754 45566665 45568888899876666543 367777764443
No 182
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.92 E-value=1.3e-08 Score=90.84 Aligned_cols=105 Identities=10% Similarity=0.081 Sum_probs=88.7
Q ss_pred ccCCchhHHHHHHHHH-HHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHH
Q 018042 77 CKFDSQLLTSFTSSLY-VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----------VNVYMLIFGRLL 144 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~~r~l 144 (361)
+|++.++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++..++..+..+. ++.+.+..+.++
T Consensus 239 ~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (356)
T TIGR00901 239 MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITL 318 (356)
T ss_pred cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHH
Confidence 5788889888777655 5778999999999999999999998888887776655443 456777788999
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHH
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIG 181 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~ 181 (361)
.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 319 EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999999999999999999999999876543
No 183
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1.5e-08 Score=88.30 Aligned_cols=145 Identities=19% Similarity=0.176 Sum_probs=109.8
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh--chhHHH-HHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF--GRKPSV-LMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVG 148 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--Grr~~l-~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~ 148 (361)
.|..|+|....++..+.+-.+...|.++.|+++||+ |||... ++.++...++.+..-.++ |+++..++-++.|+.
T Consensus 280 ~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~ 359 (448)
T COG2271 280 SEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFL 359 (448)
T ss_pred HHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 344588999999999999999999999999999996 777554 444444444444444454 458888889999988
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHH-HHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGI-GALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
.-+..-.......|..|++--|.+.|+...+..+ |.+.+... +....+.+||...|++..+.+++..+..
T Consensus 360 IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~---~g~i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 360 IYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLP---LGYIADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred HhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCc---ceeeEecCCCcchHHHHHHHHHHHHHHH
Confidence 7776777778889999999999999999887777 77777666 3333344799999987666666555444
No 184
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.91 E-value=1.4e-08 Score=93.32 Aligned_cols=149 Identities=13% Similarity=0.026 Sum_probs=95.0
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHH---HHHHHHhhh--hhhHHHHHHHHHHHHhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAF---LAGSALGGA--AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~---~~~~~~~~~--~~~~~~~~~~r~l~G~~~~ 150 (361)
..|.+..+.++....+.++..++.++.|+++||+++++....+.... .++.+.... ..+.+...+..++.|++..
T Consensus 281 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 360 (438)
T TIGR00712 281 VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIY 360 (438)
T ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHc
Confidence 34778888899999999999999999999999996543222232221 112222111 1233433344445555432
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHH-HHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccccCC
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIG-ALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFLPET 227 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~~es 227 (361)
...........|.+|+++|+.+.++.+....+| ..++|.+.+.+.+. .||...+++.....++..+.. .+.||.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 361 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---FGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222223346789999999999999998776665 56788887666643 368888887666665555544 345654
No 185
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.90 E-value=2.2e-08 Score=93.41 Aligned_cols=121 Identities=10% Similarity=0.060 Sum_probs=103.7
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh----hhhHHHHHHHHHHHHhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA----AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~r~l~G~~~~ 150 (361)
+.+|.+..+.++......++..++.++.|++.||+|||+.+..+.++..++..+..+ ..+.+.+....++.|++.+
T Consensus 284 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~ 363 (485)
T TIGR00711 284 QVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMG 363 (485)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 335778999999999999999999999999999999999999999888888877662 2355667777899999999
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
...+.......+..|+++|+.+.++.+....+|..+++.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 364 CFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred HHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888899999999999999999999999988855543
No 186
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.90 E-value=2.9e-08 Score=86.16 Aligned_cols=134 Identities=25% Similarity=0.349 Sum_probs=110.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHHhhhhhhhhHHHHH
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN--VYMLIFGRLLLGVGVGFANQSVPLY 159 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~r~l~G~~~~~~~~~~~~~ 159 (361)
...++..+.+.++..++.++.|.++||+|||+.+..+.....++.+...+..+ .+.+++.|++.|++.+...+....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 46889999999999999999999999999998888888766666666666665 8899999999999999999999999
Q ss_pred HHhcCCc-ccccchhhHHHH-HHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHH
Q 018042 160 LSEMAPA-RYRGAINNGFQF-SIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASI 216 (361)
Q Consensus 160 ~~e~~~~-~~R~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~ 216 (361)
+.|++|+ ++|+...+.... ...+|..+++.++..+... ...+||+.+.........
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHH
Confidence 9999997 678888888777 5778888888776666655 556899977666555433
No 187
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.89 E-value=3.3e-08 Score=89.24 Aligned_cols=143 Identities=8% Similarity=0.009 Sum_probs=102.8
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG-AAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
+.+|.+.++.+.+.+...++..++.++.|++.||+|+|+.+..+..+..++.++.. ..++.+..++..++.+++.....
T Consensus 228 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 307 (382)
T PRK10091 228 FISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALS 307 (382)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhh
Confidence 34578889999999999999999999999999999999999988888777775554 34555666666667777655444
Q ss_pred hHHHH-HHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc
Q 018042 154 QSVPL-YLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 154 ~~~~~-~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
++... ...+..+++.++.. ..+....+|..+||.+++.+.+.. .+|++.+.+.++..++.....
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 308 APLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLG--LAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcc--cCcchHHHHHHHHHHHHHHHH
Confidence 44443 34444444445443 346677889999999987766532 378888888776666554443
No 188
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.89 E-value=1e-08 Score=93.37 Aligned_cols=134 Identities=11% Similarity=0.024 Sum_probs=89.9
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHH-HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPS-VLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
+.+..+.+...+...++..++.++.|+++||++||+. .....++..++.++.....+....+++-.+.+++.....+..
T Consensus 275 ~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (412)
T TIGR02332 275 GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIF 354 (412)
T ss_pred CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHH
Confidence 4567788888999999999999999999999997764 344444444433322222222222222223333333333444
Q ss_pred HHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHH
Q 018042 157 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVP 213 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~ 213 (361)
.....|.+|+++|+.+.++.+....+|.+++|.+.+.+.+..+ +|++.+++.++.
T Consensus 355 ~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g--~~~~~~~~~~~~ 409 (412)
T TIGR02332 355 WTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG--SFNSGLWFVAAL 409 (412)
T ss_pred HhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC--CCchhHHHHHHH
Confidence 4555788999999999999999999999999998655554332 588888776554
No 189
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.89 E-value=1e-07 Score=84.72 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=118.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLY 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 159 (361)
+++..|.+.+...+.-.+.-.+..++.+|+|.|+.++++.++..+=.+.++++++.+.+.+.+.+-|+-.+........|
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccchhhH-HHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-ccC
Q 018042 160 LSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPE 226 (361)
Q Consensus 160 ~~e~~~~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~e 226 (361)
+++.+|+|..++...+ .+....+|..+.+.+++.+.+ +.|.+..|++.+.+.+...+...+ +++
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd---~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD---RIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh---hcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 9999999887776666 467888888888888766664 457888888877776666655544 543
No 190
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.89 E-value=7.3e-08 Score=87.30 Aligned_cols=141 Identities=11% Similarity=-0.016 Sum_probs=106.8
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
.+++|++.++.+.......++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.+...
T Consensus 244 ~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~ 323 (394)
T PRK10213 244 MNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVP 323 (394)
T ss_pred HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhh
Confidence 34457888889999999999999999999999999654443443333344444554566777888888999999999989
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHH
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT 218 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~ 218 (361)
+....++.+..| +++++..+.......+|..+|+.+++.+.+. .|++..+...+...++..
T Consensus 324 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~---~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 324 VGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN---IGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cChhhHHHHHHHHHHHHH
Confidence 989988998887 5566777777788889999999998887653 468887777665544443
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.89 E-value=8.1e-08 Score=86.65 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=91.9
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-----VNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~ 149 (361)
+++|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+..+..++.++.... ++...++...++.|++.
T Consensus 235 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (385)
T TIGR00710 235 DIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGN 314 (385)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 3457788899999999999999999999999999999999988887777776665543 23445555678889999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHH-HHHHHHHHHHH
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSI-GIGALAANFIN 191 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~-~~g~~~~~~~~ 191 (361)
+...+....+..|..| ++|+++.++.+... ..|.+.++.++
T Consensus 315 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 315 SMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888899899886 67899999877655 45666666655
No 192
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.88 E-value=2.3e-08 Score=102.91 Aligned_cols=136 Identities=15% Similarity=0.008 Sum_probs=109.3
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh--------------------hhH
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--------------------VNV 135 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--------------------~~~ 135 (361)
.+|.+..+.+++.+.+.++.+++.++.|+++|+.++++.+..+.++..++.+..++. ++.
T Consensus 255 ~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1140)
T PRK06814 255 TLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHG 334 (1140)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccccc
Confidence 357788999999999999999999999999998887776666666555555444432 677
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHH
Q 018042 136 YMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVP 213 (361)
Q Consensus 136 ~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~ 213 (361)
+.++++.++.|++.+...+...+++.+.+|+++||+++++.+....+|..+++++.+.+.... .+....+++.++.
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~--~~~~~~~~~~~~~ 410 (1140)
T PRK06814 335 WRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALG--FSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHHH
Confidence 788888999999999999999999999999999999999999999999999998877665322 2566666554443
No 193
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.87 E-value=3.4e-08 Score=92.27 Aligned_cols=122 Identities=14% Similarity=-0.068 Sum_probs=104.4
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA---AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~~ 150 (361)
++.+|.+..+.+.......++..++.++.|++.||+|+|+.+..+.++..++.++... .++.+......++.|++.|
T Consensus 287 q~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g 366 (495)
T PRK14995 287 QFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAA 366 (495)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHH
Confidence 4445889999999999999999999999999999999999999888888777665543 2456666777899999999
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 367 SALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999889999999999999999999999999999999988865543
No 194
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.87 E-value=5.2e-08 Score=90.40 Aligned_cols=150 Identities=14% Similarity=0.065 Sum_probs=98.2
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHH--------HHHHHHHH--HHHHHHhhh-hhhHHHHHHHHH
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPS--------VLMGGAAF--LAGSALGGA-AVNVYMLIFGRL 143 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~--------l~~~~~~~--~~~~~~~~~-~~~~~~~~~~r~ 143 (361)
+.+|.+..+.++..++..++..++.++.|+++||+++|+. +..+.... .+..+.... ..+.+..+++-.
T Consensus 290 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (465)
T TIGR00894 290 WVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILT 369 (465)
T ss_pred HHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 3457788999999999999999999999999999875521 11111111 111111111 234444444455
Q ss_pred HHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 144 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 144 l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
+.+.+.+...+.......|..| +.+|...++.+....+|..++|.+.+.+.+..+..+|+..|.+.++..++..+...+
T Consensus 370 l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 370 LANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 5555555555555555566666 489999999999999999999988665544322235999998888777776665554
Q ss_pred cc
Q 018042 224 LP 225 (361)
Q Consensus 224 ~~ 225 (361)
++
T Consensus 449 ~~ 450 (465)
T TIGR00894 449 FG 450 (465)
T ss_pred ee
Confidence 43
No 195
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.86 E-value=6e-08 Score=87.81 Aligned_cols=120 Identities=10% Similarity=-0.109 Sum_probs=98.5
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+.+|.+..+.|.+.+...++..+++++.+++.||.++|+++..+. +.++..+..++.++++...+.-++.|++.+...+
T Consensus 234 ~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~ 312 (393)
T PRK11195 234 VALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVV 312 (393)
T ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhh
Confidence 345778999999999999999999999999999999998887775 3444455556677777777788899999888888
Q ss_pred HHHHHHHhcCCccc-ccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 155 SVPLYLSEMAPARY-RGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 155 ~~~~~~~e~~~~~~-R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
+..+.+.|..|++. +|++.++.+....+|..++..+...+.
T Consensus 313 ~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 313 PMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred hHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 88888888766654 799999999999999888888876554
No 196
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.86 E-value=3.4e-08 Score=91.31 Aligned_cols=152 Identities=8% Similarity=-0.019 Sum_probs=120.1
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh----------hhhHHHHHHHHHH
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA----------AVNVYMLIFGRLL 144 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~r~l 144 (361)
+.+|.++++.|.......++.+++....+.+.+|++.|+++.++.++.+++.+.... .++.+.++...++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 457899999999999999999999999999999999999999999999888755431 1344455566889
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCC----CcchHHHHH-hhHHHHHHHHH
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG----GWGWRVSLA-LAAVPASILTL 219 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~wr~~~~-~~~~~~~~~~~ 219 (361)
.+++.+....+...++.+..|+++++...++.....++|..+++.+++.+.+..+ +++.++... ++.+..++...
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998887776433 233333333 34444444444
Q ss_pred hcccccC
Q 018042 220 GALFLPE 226 (361)
Q Consensus 220 ~~~~~~e 226 (361)
..+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4456886
No 197
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.85 E-value=8.9e-08 Score=87.04 Aligned_cols=144 Identities=11% Similarity=0.043 Sum_probs=98.7
Q ss_pred cccccCCchhHHHHHHHHH-HHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHh---hhh-hhHHHHHHHH----HH
Q 018042 74 SNYCKFDSQLLTSFTSSLY-VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GAA-VNVYMLIFGR----LL 144 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~r----~l 144 (361)
.+++|++.++.+++.+... ++..++.++.|++.||+|||+.+..+.++..+..+.. +.. ++.+.++++- +.
T Consensus 237 ~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (402)
T PRK11902 237 IRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLC 316 (402)
T ss_pred HHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 3445888899999876554 5688999999999999999998877776665554333 333 3555555544 45
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
.|++.+...+....++.+.+|.+.+ +..+...++|.+.++.+++.+.+. .||+..|.+.++++++..++.+..
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~---~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 317 GGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEA---YGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677777777888888776654 444444556666555566555543 489999999888877766555433
No 198
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.2e-08 Score=94.24 Aligned_cols=152 Identities=16% Similarity=0.083 Sum_probs=134.7
Q ss_pred cccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc--hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 72 KISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG--RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 72 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
+..++.+.+..+...+.++..+...++.++.|+++|+.. ++.+..++.++.+++.+..+++++++.++..-.+.|++.
T Consensus 323 ~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~ 402 (509)
T KOG2504|consen 323 SYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCV 402 (509)
T ss_pred HHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 335566889999999999999999999999999999987 567778888889999999999999999999999999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccccc
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 225 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 225 (361)
|.........+.|....++-..+.++.....+++..+||++++.+.+..+ +|...|+.+++..++....+++.|
T Consensus 403 g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg--~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 403 GSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG--NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC--CeeeehhhcChHHHHHHHHHHHhH
Confidence 99998888999999999999999999999999999999999887766654 588899998888887777666665
No 199
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.84 E-value=2.4e-07 Score=88.07 Aligned_cols=147 Identities=15% Similarity=0.202 Sum_probs=115.0
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-chhHHHHHHHHHHHHHHHHhhhhhh--------HHHHHHHHHHH
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVN--------VYMLIFGRLLL 145 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~r~l~ 145 (361)
+.+|++.+....+...+....-+.+++.|.++|++ ||++++.++.++..++..+.+++.. ....+++-.+.
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLi 95 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALI 95 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHH
Confidence 34577888888888888888888999999999985 9999999999999999888776421 23356778888
Q ss_pred HhhhhhhhhHHHHHHHhcCCccc---ccchhhHHHHHHHHHHHHHHHHHhhhcccC----CCcchHHHHHhhHHHHHHHH
Q 018042 146 GVGVGFANQSVPLYLSEMAPARY---RGAINNGFQFSIGIGALAANFINYGTEQIK----GGWGWRVSLALAAVPASILT 218 (361)
Q Consensus 146 G~~~~~~~~~~~~~~~e~~~~~~---R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~wr~~~~~~~~~~~~~~ 218 (361)
++|.|..-+...+...|.+++++ |-....++..+.++|+.+++.+...+.... ...+|...|.+.++..++..
T Consensus 96 a~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 96 ALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL 175 (654)
T ss_pred HhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence 89999999999999999998654 556777788888999988888866655321 23479999988887777665
Q ss_pred Hhc
Q 018042 219 LGA 221 (361)
Q Consensus 219 ~~~ 221 (361)
+..
T Consensus 176 lvf 178 (654)
T TIGR00926 176 IVF 178 (654)
T ss_pred HHH
Confidence 544
No 200
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.84 E-value=1.4e-07 Score=84.99 Aligned_cols=149 Identities=18% Similarity=0.247 Sum_probs=115.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHH----HHHHHHhhhhhhh
Q 018042 79 FDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIF----GRLLLGVGVGFAN 153 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~----~r~l~G~~~~~~~ 153 (361)
.+.+..+.+.++..+.-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+ ...+.|+..+..+
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 456667777777777778888999999999999999999999999988888776 45444333 3456999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHH-HHHHHHHHHHHHHhhhcccCCC---cchHHHHHhhHHHHHHHHHhc-ccccCC
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQF-SIGIGALAANFINYGTEQIKGG---WGWRVSLALAAVPASILTLGA-LFLPET 227 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~---~~wr~~~~~~~~~~~~~~~~~-~~~~es 227 (361)
.....|+.+..|++.|+++.++++. ..++|..+|..+++.+.+..+. ..|...+.+.+++.++..+.. ++++|+
T Consensus 320 ~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 320 AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999775 5789999999998887764331 245566666666666555554 446554
No 201
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.82 E-value=1.7e-07 Score=83.95 Aligned_cols=140 Identities=13% Similarity=0.064 Sum_probs=91.4
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhch---hHHHHH-HHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR---KPSVLM-GGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr---r~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
|.+.+ .+...++..+...++ .++++||..| |+.... ..++..+.....+...+....++.-.+.|++....+
T Consensus 223 g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 298 (368)
T TIGR00903 223 GLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAY 298 (368)
T ss_pred CCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhH
Confidence 44543 455554544444444 4677777654 333332 344444444444555555555555667777777777
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccC
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPE 226 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~e 226 (361)
+...++.+|.+|++.|+++.++.+....+|.+.+|.+...+.. +-+..|.+.+++.++..+..+++++
T Consensus 299 ~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-----~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 299 AIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-----SAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7888999999999999999999999999999888888654442 5666777767766666655544454
No 202
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.81 E-value=4.9e-08 Score=86.78 Aligned_cols=115 Identities=20% Similarity=0.304 Sum_probs=99.3
Q ss_pred cccccCC-chhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHHhhh
Q 018042 74 SNYCKFD-SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV---NVYMLIFGRLLLGVGV 149 (361)
Q Consensus 74 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~ 149 (361)
.+++|.+ ..+.+...+...++..++.++.|+++||+|+|+..........+..+...... +....++.-++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 313 (352)
T PF07690_consen 234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGF 313 (352)
T ss_dssp CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHH
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4556778 78889999999999999999999999999998888777777777766665543 4567777888999999
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHH
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAAN 188 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~ 188 (361)
+...+....++.|.+|+++|+++.++.+....+|..++|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 314 GIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999999999886
No 203
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=3.5e-08 Score=84.34 Aligned_cols=129 Identities=14% Similarity=0.082 Sum_probs=97.9
Q ss_pred HHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccc
Q 018042 92 YVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGA 171 (361)
Q Consensus 92 ~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~ 171 (361)
.+.-.-|.++.+.+.||+|||+++..+.++++++.++.....+...+.+.-+..-++....+.+.+.|..|.+|..-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 45567789999999999999999999999999999888776555444444444455556667788899999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccccc
Q 018042 172 INNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLP 225 (361)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~ 225 (361)
+.|.-....-+|.++.|+++..... .-..+..+.+...++..+...++|
T Consensus 471 gvGtcSsmaRIggI~~p~iA~~~e~-----s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIAMRAEL-----STSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred chhhhhhHHhhhhhhhhHHHHHhcc-----ceeehHHHHHHHHHHHHHHheeee
Confidence 9999999999999999999732221 222344455555566666666665
No 204
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.78 E-value=3.6e-08 Score=88.52 Aligned_cols=131 Identities=18% Similarity=0.121 Sum_probs=94.2
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc-hhHHHH-HHH-HHHHHHHHHhhh--hhhHHHHHHHHHHHHhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-RKPSVL-MGG-AAFLAGSALGGA--AVNVYMLIFGRLLLGVG 148 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-rr~~l~-~~~-~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~ 148 (361)
++++|.+..+.+...+...++..++.++.|++.||++ ||+... ... ....++...... ..+.....+..++.|+.
T Consensus 244 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 323 (379)
T TIGR00881 244 TQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFL 323 (379)
T ss_pred HHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHH
Confidence 3445778889999999999999999999999999864 333222 221 222222222222 34555566667777876
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHH
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSL 207 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~ 207 (361)
.....+....+..|.+|+++|+++.++.+....+|..+++.+.+.+.+. .||++.|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~f 379 (379)
T TIGR00881 324 VYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG---FGWAGAF 379 (379)
T ss_pred HhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh---hcccccC
Confidence 6666666778899999999999999999999999999999997776643 4677653
No 205
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.78 E-value=6.4e-07 Score=83.21 Aligned_cols=116 Identities=13% Similarity=0.098 Sum_probs=88.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHhhhhhhhh
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-----AVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+.+..+.+.+...++..++.+++++++||+|+|+.+.++..+.+++.+.... ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777777888999999999999999999999888776666555432 34566777778889999999999
Q ss_pred HHHHHHHhcCCc-------ccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 155 SVPLYLSEMAPA-------RYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 155 ~~~~~~~e~~~~-------~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
...++++|..+. +..|...+......-+|..+++.+.+.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999662 22355778888888888888777766554
No 206
>PRK10133 L-fucose transporter; Provisional
Probab=98.76 E-value=2.5e-07 Score=84.98 Aligned_cols=136 Identities=8% Similarity=-0.043 Sum_probs=103.4
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
++.+|+++.+.++....+.++..++.++.+++.||+|||+++..+.++..++.++..+.++.. .+..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999999888888777776666655543 3456778999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcc-hHHHHHhhHHHHH
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWG-WRVSLALAAVPAS 215 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-wr~~~~~~~~~~~ 215 (361)
|...+...|.+++ +.+.+.++..... +|..++|.+.+.+.+. .| -|..|++..+..+
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~~~-~g~~~~~~i~G~l~~~---~g~~~~~~~v~~~~~~ 423 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVMTI-IGGGIVTPVMGFVSDA---AGNIPTAELIPALCFA 423 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhHHh-ccchHHHHHHHHHHHh---ccchHHHHHHHHHHHH
Confidence 9999999998875 4566777765433 5666666665555543 34 6777765544433
No 207
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.74 E-value=3e-08 Score=86.52 Aligned_cols=146 Identities=14% Similarity=0.043 Sum_probs=109.4
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-------VNVYMLIFGRLLLG 146 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~r~l~G 146 (361)
+++|+.+..+.+.....+.+...+.-+..|+++||+|.++++......+.++..+.... ++...+++.-+..+
T Consensus 246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~ 325 (417)
T COG2223 246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALF 325 (417)
T ss_pred HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHH
Confidence 45578899999999999999999999999999999999999998888888888777665 34444444444555
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
++.|.....+..++...+|+ +-|.+.++.....++|...-|..-+...+..+ .+...|++.....++..+..+
T Consensus 326 ~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg--~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 326 VFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG--SYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred HHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHH
Confidence 55555555566777777764 67888999999999998777766554444443 588888887777666665544
No 208
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.71 E-value=4.6e-07 Score=82.10 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=77.1
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
+++|.+..+.+.+.+...++..++.++.+++.||+|||+.+..+.++..++.+...+.++.+..+..-.+.+.+.+...+
T Consensus 232 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 311 (392)
T PRK10473 232 EQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFG 311 (392)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 34577888899999999999999999999999999999999999998888888877776665545544555554444433
Q ss_pred HHHHHHHhcCCccccc-chhhHHHHHHHHHHHHHHHH
Q 018042 155 SVPLYLSEMAPARYRG-AINNGFQFSIGIGALAANFI 190 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~-~~~~~~~~~~~~g~~~~~~~ 190 (361)
. ....+..|.++|+ .+.++...+..+|..+++.+
T Consensus 312 ~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l 346 (392)
T PRK10473 312 V--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWL 346 (392)
T ss_pred H--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 3 2334455555553 33333433334444444333
No 209
>PRK09669 putative symporter YagG; Provisional
Probab=98.69 E-value=3.1e-06 Score=78.00 Aligned_cols=114 Identities=18% Similarity=0.145 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 018042 83 LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA--AVNVYMLIFGRLLLGVGVGFANQSVPLYL 160 (361)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 160 (361)
..+.+.....+...++.+++++++||+|+|+.+..+.++..+..+...+ ..+.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556667777889999999999999999998887766654433222 35677778888999999999999999999
Q ss_pred HhcCCcc-------cccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 161 SEMAPAR-------YRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 161 ~e~~~~~-------~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
+|..+.+ ..|...+.......+|..+++.+++.+..
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998632 23456677777778888888877765543
No 210
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.67 E-value=1.3e-06 Score=78.75 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=83.0
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh---h-hhhHHHHHHHHHHHHhhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG---A-AVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~r~l~G~~~~~ 151 (361)
++|.+.++.+...+...++..++.++.|++.||+|||+.+..+..+..+..+... . ..+.+...++-.+.+.+.+.
T Consensus 224 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T PRK11102 224 LNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSM 303 (377)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3577889999999999999999999999999999999999888766444333222 1 22455555555555555555
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHH-HHHHHHHHHHHHHh
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQF-SIGIGALAANFINY 192 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~-~~~~g~~~~~~~~~ 192 (361)
.......++.|..| ++|+.+.++... ...+|..+++.++.
T Consensus 304 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 304 ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56666677788776 789998888654 45677777776643
No 211
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.67 E-value=5.7e-08 Score=88.69 Aligned_cols=153 Identities=16% Similarity=0.168 Sum_probs=111.4
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-----chhHHHHHHHHHHHHHHHHhhhh----hhHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-----GRKPSVLMGGAAFLAGSALGGAA----VNVYMLIF 140 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~~ 140 (361)
.|-+++++|+++++...+.+...+-..+ .++.|.++|-+ -||+-++++.++..++.+..+.. .+.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 3445777899999988888777766654 67889999986 35666666777776655555543 35666677
Q ss_pred HHHHHHhhhhhhhhHHHHHHHhcCCc--ccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHH
Q 018042 141 GRLLLGVGVGFANQSVPLYLSEMAPA--RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT 218 (361)
Q Consensus 141 ~r~l~G~~~~~~~~~~~~~~~e~~~~--~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~ 218 (361)
.-++..+|.+.....+-+.+.|.... +.||...+.......+|.+++..+++.+.+. .++|..|.+.+++..+..
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~---~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS---FGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc---CCCeEEehHHHHHHHHHH
Confidence 77888999999999999999999843 3366777777788888999888887666543 468888888777666665
Q ss_pred Hhccc-ccC
Q 018042 219 LGALF-LPE 226 (361)
Q Consensus 219 ~~~~~-~~e 226 (361)
+..++ .+|
T Consensus 169 ~~~~~~~~e 177 (433)
T PF03092_consen 169 IVALFLLEE 177 (433)
T ss_pred HHHHHhhhh
Confidence 55544 444
No 212
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.63 E-value=2.4e-08 Score=87.82 Aligned_cols=133 Identities=20% Similarity=0.112 Sum_probs=102.1
Q ss_pred HHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhh----H----HHHHHHHHHHHhhhhhhhhHHHHHHHhcC
Q 018042 93 VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN----V----YMLIFGRLLLGVGVGFANQSVPLYLSEMA 164 (361)
Q Consensus 93 ~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~----~----~~~~~~r~l~G~~~~~~~~~~~~~~~e~~ 164 (361)
+++..|-.+...++|++|||+..+.|.+++.+..+..+...| . ..+.+..++.-+| .......+-+|.|
T Consensus 359 ~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~F 435 (538)
T KOG0252|consen 359 CSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIF 435 (538)
T ss_pred HccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhc
Confidence 344457777889999999999999999999999999988766 1 2223334444443 3345556679999
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHhhhcc--cCCCcchHHHHHhhHHHHHHHHHhcccccCCh
Q 018042 165 PARYRGAINNGFQFSIGIGALAANFINYGTEQ--IKGGWGWRVSLALAAVPASILTLGALFLPETP 228 (361)
Q Consensus 165 ~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~ 228 (361)
|.+.|+...++..+..-+|.+++...-....+ .....+-|+.+++.+.+..+..+..+++||+.
T Consensus 436 ParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 436 PARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred hHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeeccc
Confidence 99999999999999999999998877444443 11145889999999999888888888999984
No 213
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.59 E-value=4.8e-07 Score=82.99 Aligned_cols=115 Identities=21% Similarity=0.153 Sum_probs=99.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGFANQSVPLY 159 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~~ 159 (361)
+..+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5667778888999999999999999999999999999999999999988886 99999999999999999999999999
Q ss_pred HHhcCCcc-------cccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 160 LSEMAPAR-------YRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 160 ~~e~~~~~-------~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
++|..+.+ ..|...+.......+|..+++.+.+.+..
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 99998742 34778888888888888887777665543
No 214
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.56 E-value=3.4e-06 Score=64.79 Aligned_cols=115 Identities=19% Similarity=0.145 Sum_probs=94.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLY 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 159 (361)
++..--.-.++......+++++.+.+.+++|.|+.+++|.+...+-.... +-++.+.++.+-.+.|++.+..++....+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~y 113 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTY 113 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHH
Confidence 33333344566667778888999999999999999999999888655543 56778889999999999999999999999
Q ss_pred HHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 160 LSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 160 ~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
+.+..+++.|++..+++......+.++|.++...+.
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888888877765543
No 215
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.56 E-value=2.7e-06 Score=73.03 Aligned_cols=150 Identities=18% Similarity=0.107 Sum_probs=112.0
Q ss_pred ccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-chhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Q 018042 71 TKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGV 149 (361)
Q Consensus 71 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 149 (361)
|.+-.|-|+|+.+.|.+.+...+.....++....+.+|. .+|+..+..++++.++.+.+.+.|.-..+.- -++.|+|.
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~ 310 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQ 310 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCcc
Confidence 344455589999999999999999999999999999975 7888888888888888888877765443333 48999999
Q ss_pred hhhhhHHHHHHHhcCCcccc-cchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 150 GFANQSVPLYLSEMAPARYR-GAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
|..++....++.+-.+..++ +.-.++.+....+=..+||.+.+.+-+..+ +|+......+..++...+.-+.
T Consensus 311 G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g--sw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 311 GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG--SWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC--ChHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999988765544 333344444333334567777766666555 8998887777766666555443
No 216
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.55 E-value=1.6e-06 Score=78.87 Aligned_cols=134 Identities=13% Similarity=-0.056 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh-h-----hhHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 018042 88 TSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-A-----VNVYMLIFGRLLLGVGVGFANQSVPLYLS 161 (361)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 161 (361)
..+..+...+..+++|+++||+|+|+++.++.+...++...... . .+++.+.+..+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 34456777888999999999999999999888777776543221 1 24566666555555666666667777777
Q ss_pred hcCCc---------------------ccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHh
Q 018042 162 EMAPA---------------------RYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLG 220 (361)
Q Consensus 162 e~~~~---------------------~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~ 220 (361)
+.+|+ ++-|.+.|+......+|..+.|.+-+...+..+ ++...|+...+..+++..+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g--~~~~~~~~~~~~~~~~~~~ 449 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG--SPVGAMKVFLIFYIVCVLL 449 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHH
Confidence 77774 134567777778888877777755333333333 5777787777766666655
Q ss_pred ccc
Q 018042 221 ALF 223 (361)
Q Consensus 221 ~~~ 223 (361)
.+.
T Consensus 450 ~w~ 452 (462)
T PRK15034 450 TWL 452 (462)
T ss_pred HHH
Confidence 543
No 217
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.55 E-value=1.9e-06 Score=80.49 Aligned_cols=138 Identities=10% Similarity=0.024 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHhh----HHHHHhhchhHHHHHHHHHHHHHHHHhhhhhh---------HHHHHHHHHHHHhhhh
Q 018042 84 LTSFTSSLYVAGLVASFVA----SSVTRAFGRKPSVLMGGAAFLAGSALGGAAVN---------VYMLIFGRLLLGVGVG 150 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~----g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~~ 150 (361)
.+++.++..+...+..++. +++.+|++.++.+.+|.++.+++.+..+.+.+ .++++...++.|+|+.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 3445555555555555555 55666666668889999999999888777655 4678889999999999
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc--c----C-CCcchHHHHHhhHHHHHHHHHhc
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ--I----K-GGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~--~----~-~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
...|...+++.+..|++.||++++++..+..+|..++..+...... . . ...+..+.|...++.+++..++.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888888887777542211 0 0 01135677766666655444433
No 218
>PRK11043 putative transporter; Provisional
Probab=98.54 E-value=3.8e-06 Score=76.32 Aligned_cols=119 Identities=9% Similarity=-0.066 Sum_probs=88.4
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHh---hh--hhhHHHHHHHHHHHHhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG---GA--AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~---~~--~~~~~~~~~~r~l~G~~~~ 150 (361)
++|.+..+.++......++..++.++.+++.||+|+|+.+....+...++.+.. .. .++.+.+++...+.|++.+
T Consensus 232 ~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (401)
T PRK11043 232 QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANG 311 (401)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence 357788888988888888889999999999999999987665554444433322 11 3455555666778888888
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
..++.......|..| ++|+++.++.+.....+...++.+.+.+.
T Consensus 312 ~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 312 AIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred HHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888888888778776 57999999998877767667766655443
No 219
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.54 E-value=2.4e-06 Score=79.34 Aligned_cols=136 Identities=14% Similarity=0.094 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhch-----hHHH--HHHHHHHHHHHHHhhh---------hhhHHHHHHHHHHHHh
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGR-----KPSV--LMGGAAFLAGSALGGA---------AVNVYMLIFGRLLLGV 147 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Gr-----r~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~ 147 (361)
.+++.+...+...+.+++..++-.+.+| +... .+|+++.+++....++ ..|+++++...++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 5667777777777777775554444443 3333 7788888888777664 4689999999999999
Q ss_pred hhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 148 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 148 ~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
|+....|...++++|..|++.||++++++.....+|..+++.+....... .+|...|...++..++..++.+
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP---QGVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998886655432 3688787776666665555443
No 220
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.45 E-value=7.6e-06 Score=73.83 Aligned_cols=116 Identities=20% Similarity=0.217 Sum_probs=92.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHhhhhhhhhH
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
|.++.+..+.......+.+++.++...+++|+|+|+++.++.++.+++.++..+.+ +.+..++..++.+++.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 33555666777777788888899999999999999999999999999999988876 7788888899999999999999
Q ss_pred HHHHHHhcCCc-----ccc--cchhhHHHHHHHHHHHHHHHHHhh
Q 018042 156 VPLYLSEMAPA-----RYR--GAINNGFQFSIGIGALAANFINYG 193 (361)
Q Consensus 156 ~~~~~~e~~~~-----~~R--~~~~~~~~~~~~~g~~~~~~~~~~ 193 (361)
..++++|..+- ..| |...+......=+|..++..+.+.
T Consensus 348 ~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 348 PWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred cHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887752 222 566667777666777666655443
No 221
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.41 E-value=6.4e-07 Score=80.53 Aligned_cols=143 Identities=14% Similarity=0.099 Sum_probs=118.3
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
|.+-.+...|........+-++.-++.+++.+|+|+-+++..++.+..+=.+..+...|.|+.+-..+++|+..+..+.+
T Consensus 400 d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa 479 (618)
T KOG3762|consen 400 DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAA 479 (618)
T ss_pred hcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHH
Confidence 33445666677777777888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcccccchhhHHHH-HHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc
Q 018042 156 VPLYLSEMAPARYRGAINNGFQF-SIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 156 ~~~~~~e~~~~~~R~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
+.+|++...|++.|..+.++.+. ..++|--+|.++++.+... .+-|..|.+.++.+++.++..
T Consensus 480 ~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~---fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 480 IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER---FGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee---ehhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998664 5577777777777666544 367777777666665555443
No 222
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.41 E-value=1.2e-05 Score=73.00 Aligned_cols=118 Identities=14% Similarity=0.037 Sum_probs=89.4
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHH-HHHHHhhh--hhhHHHHHHHHHHHHhhhhhhh
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFL-AGSALGGA--AVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~-~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
+|.+..+.+++.....++..++.++.+++.||++++........... +....... ..+.+.++++.++.|++.+...
T Consensus 238 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (394)
T PRK11652 238 LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLF 317 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 57788888998888888999999999999999985443332222222 22222222 2356677778899999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
+....+..|.+| ++++...++.+....+|..+++.++..+.
T Consensus 318 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 318 PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999887 57899999999999999999998876654
No 223
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.40 E-value=2.1e-05 Score=70.96 Aligned_cols=107 Identities=19% Similarity=0.122 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcc
Q 018042 88 TSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPAR 167 (361)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~ 167 (361)
.++......+++++++.+.|+.|.|+.+.++........+..-+ +|-+-++++-.+.|+|.+..+.....|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 67777888999999999999999999999999998887776655 55677889999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 168 YRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 168 ~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
.+.+..++.......+.++|.++-....
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 9999999888888888888776644444
No 224
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.39 E-value=7.4e-07 Score=60.10 Aligned_cols=69 Identities=13% Similarity=0.064 Sum_probs=64.3
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYML 138 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (361)
.|.+++|.++|.++.+++.+...+|+.+|.+...++.++..+++.+..+.+...+.++.+++.++.+.+
T Consensus 15 LP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 15 LPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 778899999999999999999999999999999999999888999999999999999999998887754
No 225
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.38 E-value=6.5e-06 Score=76.55 Aligned_cols=138 Identities=12% Similarity=0.060 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhchhHH-------HHHHHHHHHHHHHHhh-----h-----hhhHHHHHHHHHHHHh
Q 018042 85 TSFTSSLYVAGLVASFVASSVTRAFGRKPS-------VLMGGAAFLAGSALGG-----A-----AVNVYMLIFGRLLLGV 147 (361)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~-------l~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~r~l~G~ 147 (361)
.++.+...+...+..++.+++.||+|+|+. +.+|+++.+++.+..+ . ..+++.++..-++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 445555666777888889999999999973 6677777666654321 1 1357778888999999
Q ss_pred hhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCC-------CcchHHHHHhhHHHHHHHHHh
Q 018042 148 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-------GWGWRVSLALAAVPASILTLG 220 (361)
Q Consensus 148 ~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~wr~~~~~~~~~~~~~~~~ 220 (361)
|++...++..+++.+..|++.++.+++++.....+|..++..++.......+ .....+.|...++..++..++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888754431110 112456666655555554444
Q ss_pred cc
Q 018042 221 AL 222 (361)
Q Consensus 221 ~~ 222 (361)
.+
T Consensus 472 ~~ 473 (489)
T PRK10207 472 MA 473 (489)
T ss_pred HH
Confidence 43
No 226
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.38 E-value=2.3e-05 Score=73.60 Aligned_cols=141 Identities=18% Similarity=0.108 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhH-------------HHHHHHHHHHHhhhhh
Q 018042 85 TSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNV-------------YMLIFGRLLLGVGVGF 151 (361)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~-------------~~~~~~r~l~G~~~~~ 151 (361)
.....+..+...++..+...+.||+|||+.++.+...+.++.++.+..... ..+...-+........
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g 411 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG 411 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcc
Confidence 445555566667777888999999999999999999999999888764221 1111122222222233
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhH-HHHHHHH-HhcccccCCh
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAA-VPASILT-LGALFLPETP 228 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~-~~~~~~~-~~~~~~~es~ 228 (361)
..+....+.+|.+|.+.|+++.++......+...+-... ........++...|.... +..+... ....++||+.
T Consensus 412 ~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~---~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 412 WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFF---FPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHH---HHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 344555688999999999999988766555554433222 111111112334444433 3333333 3556799984
No 227
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.37 E-value=7.4e-07 Score=78.58 Aligned_cols=120 Identities=17% Similarity=0.231 Sum_probs=92.8
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh----hchhHHHHH-HHHHHHHHHHHhhhhhh---------------
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRKPSVLM-GGAAFLAGSALGGAAVN--------------- 134 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~l~~-~~~~~~~~~~~~~~~~~--------------- 134 (361)
++.|++....+.+--...+...+.+++.|..+|| |||||.++. +.....++.++..++.+
T Consensus 60 ~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ 139 (498)
T KOG0637|consen 60 QSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKP 139 (498)
T ss_pred HHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccch
Confidence 3447788887777777778888999999999996 898876655 55666677777776543
Q ss_pred --HHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccc-hhhHHHHHHHHHHHHHHHHHhhh
Q 018042 135 --VYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGA-INNGFQFSIGIGALAANFINYGT 194 (361)
Q Consensus 135 --~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~-~~~~~~~~~~~g~~~~~~~~~~~ 194 (361)
...++++.-+.-++.-....++-+++.|...+++|.+ +++++....++|+.+|...+.+.
T Consensus 140 rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 140 RAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 2345555566666777889999999999998877777 99999999999999988887543
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.36 E-value=1.2e-06 Score=76.08 Aligned_cols=144 Identities=13% Similarity=0.031 Sum_probs=114.4
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc--hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG--RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
.+..+..+.|+..--..+.+.+++.+.|.++||++ |-.....+++..++.+....+++++.++++-++..+++.+...
T Consensus 300 ~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~d 379 (464)
T KOG3764|consen 300 TMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLAD 379 (464)
T ss_pred hccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHH
Confidence 34445557777777788899999999999999999 6555566777777778888889999999999999999988888
Q ss_pred hHHHHHHHhcCCcccc------cchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcc
Q 018042 154 QSVPLYLSEMAPARYR------GAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
......+.+..+.++- |...++...++++|..+||.+++.+.+. .|++|...+.++..++-..+..
T Consensus 380 asl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~---iGF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 380 ASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA---IGFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred HHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee---hhHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777765543 5677888999999999999998777654 4799998888777776665543
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.35 E-value=6.8e-05 Score=66.06 Aligned_cols=150 Identities=16% Similarity=0.126 Sum_probs=120.4
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHH-hhchhHHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHH
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR-AFGRKPSVLMGGAAFLAGSALGGA---AVNVYMLIFGRLLL 145 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~ 145 (361)
+|.=.+-||++..+...++..+..|..++-...|++.. |.+.++.-.+++....++..+..+ ..+.+.+..+-++.
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLL 311 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 55557778999999999999999999999999998888 577778877888877777665443 46788999999999
Q ss_pred HhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhccc----C---CCcchHHHHHhhHHHHHHHH
Q 018042 146 GVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQI----K---GGWGWRVSLALAAVPASILT 218 (361)
Q Consensus 146 G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~---~~~~wr~~~~~~~~~~~~~~ 218 (361)
|++.|.......+.+.|...+++.|..++.+.....++..++..+++.+.+. . ...++-..|.+.++..++..
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888888888877766642 1 22356666666665544444
Q ss_pred H
Q 018042 219 L 219 (361)
Q Consensus 219 ~ 219 (361)
.
T Consensus 392 ~ 392 (403)
T PF03209_consen 392 V 392 (403)
T ss_pred H
Confidence 3
No 230
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.34 E-value=8e-09 Score=95.40 Aligned_cols=150 Identities=17% Similarity=0.090 Sum_probs=90.3
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh--h--h-hh----HHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG--A--A-VN----VYMLIFGRLL 144 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~--~--~-~~----~~~~~~~r~l 144 (361)
.++.+.+.. -.......+...++.++...+.||+|||+.++.+.++..++++..+ . . .+ -...++.-.+
T Consensus 280 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 357 (451)
T PF00083_consen 280 FENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLAL 357 (451)
T ss_pred ccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence 344454554 2222333345566777778999999999999999988888877664 1 1 11 1112222222
Q ss_pred HHhhhh-hhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHH-Hhcc
Q 018042 145 LGVGVG-FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT-LGAL 222 (361)
Q Consensus 145 ~G~~~~-~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~-~~~~ 222 (361)
...+.+ ...+....+..|.+|.+.|+++.++......++..+++.+. ....+..+-...+.+.+.+.++.. +..+
T Consensus 358 ~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~---~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 358 FFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLF---PYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccchhhHHHHHHHHhheeE
Confidence 222222 33455668889999999999999998887777777776663 333232231233444444444444 4457
Q ss_pred cccCCh
Q 018042 223 FLPETP 228 (361)
Q Consensus 223 ~~~es~ 228 (361)
++|||.
T Consensus 435 ~lpET~ 440 (451)
T PF00083_consen 435 FLPETK 440 (451)
T ss_pred EEeeCC
Confidence 799984
No 231
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.33 E-value=5.6e-05 Score=69.07 Aligned_cols=116 Identities=6% Similarity=-0.009 Sum_probs=86.4
Q ss_pred CchhHHHHHHHHHHHHHHH-HHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh----h---------------------
Q 018042 80 DSQLLTSFTSSLYVAGLVA-SFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----V--------------------- 133 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~-~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----~--------------------- 133 (361)
+.+.+.++.+...+...+. .++.+++++|++|++.+-.....+.....++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4467888888777776655 8889999999999999877776666666665553 1
Q ss_pred ------hHHHHHHHHHHHHhhhhhhhh-HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 134 ------NVYMLIFGRLLLGVGVGFANQ-SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 134 ------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
+.|...+.-+...+-...... .-..+++|.++.++-.+..+++..+.++|.++++.+...+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444445554444444 67789999999999899999999999999999998866665
No 232
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.30 E-value=2e-06 Score=77.02 Aligned_cols=108 Identities=16% Similarity=0.093 Sum_probs=80.2
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh--hh--hHHHHHHHHHHHHhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA--AV--NVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~--~~--~~~~~~~~r~l~G~~~~ 150 (361)
+.+|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+......+..+..+ .+ +.+...+.-.+.+++.|
T Consensus 254 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 333 (366)
T TIGR00886 254 DQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSG 333 (366)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhc
Confidence 345778889999999999999999999999999999998877776666555544433 22 55555555555666666
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHH
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIG 183 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g 183 (361)
...+....++.|..| ++||.+.++.+....+|
T Consensus 334 ~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 334 AGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 666667777888887 68999999887765544
No 233
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.30 E-value=6.4e-06 Score=75.48 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=97.5
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhch---------hHHHHHHHHHHHHHHHHhhhhhh--H-HHHHHHHHH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR---------KPSVLMGGAAFLAGSALGGAAVN--V-YMLIFGRLL 144 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr---------r~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~r~l 144 (361)
+|++..+.|+++++..+...+..+++|+++||.-+ |..-.++....+++.+..++.++ . ..+++.-+-
T Consensus 289 L~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~ 368 (466)
T KOG2532|consen 289 LGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIA 368 (466)
T ss_pred hCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHH
Confidence 58899999999999999999999999999999744 22334455556666666666552 2 122222221
Q ss_pred HHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 145 LGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 145 ~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
.++. |...+....-..|. .+++-+..+++.+....+..+++|.+.+.+....+...||+.|++.+++.++..+...++
T Consensus 369 ~~~~-g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 369 IGLS-GFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHc-ccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 2221 11121122222222 457788999999999999999999996666642234589999999988888777665443
No 234
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.30 E-value=2.3e-05 Score=71.42 Aligned_cols=131 Identities=8% Similarity=-0.059 Sum_probs=96.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLY 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 159 (361)
+....+...+.+..+..+|.++.+++.||+++|+++.+..++..+.+++..+.++... ..+-++.|++.+..+|+..+.
T Consensus 267 ~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl 345 (410)
T TIGR00885 267 TAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGI 345 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666666788999999999999999999999999988888888888776544 566778888899999999999
Q ss_pred HHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCC--Cc-chHHHHHhhHHH
Q 018042 160 LSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG--GW-GWRVSLALAAVP 213 (361)
Q Consensus 160 ~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~-~wr~~~~~~~~~ 213 (361)
..+..+++.+. +.+...++ .+|..+.|++.+.+.+..+ +. +.+..|++..+.
T Consensus 346 ~~~~~g~~~~~-~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 346 ALKGLGQDTKY-GAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHhhhhhhhhh-hHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 99999866542 23333333 3899999999887776321 11 356666654433
No 235
>PRK11462 putative transporter; Provisional
Probab=98.28 E-value=7.4e-05 Score=69.15 Aligned_cols=112 Identities=14% Similarity=0.052 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 018042 83 LLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAV--NVYMLIFGRLLLGVGVGFANQSVPLYL 160 (361)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~~~ 160 (361)
..+.+.+.+.++.+++.+++++++||+|+|+.+..+..+..+..++..+.+ +...+++.-++.|++.+...+...+++
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ 343 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMM 343 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777888899999999999999999987765554444333333322 233344455677887777777777788
Q ss_pred HhcCCc-----ccc--cchhhHHHHHHHHHHHHHHHHHhhh
Q 018042 161 SEMAPA-----RYR--GAINNGFQFSIGIGALAANFINYGT 194 (361)
Q Consensus 161 ~e~~~~-----~~R--~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (361)
+|..+. .+| |...+......-+|..+++.+++.+
T Consensus 344 ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 344 SDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877662 233 4444555566666666666555443
No 236
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.24 E-value=3.7e-05 Score=70.59 Aligned_cols=142 Identities=17% Similarity=0.038 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhch-hHHHHHHHHHHHHHHHHhhhhhh---------------------HHHHHHHHH
Q 018042 86 SFTSSLYVAGLVASFVASSVTRAFGR-KPSVLMGGAAFLAGSALGGAAVN---------------------VYMLIFGRL 143 (361)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~l~d~~Gr-r~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~r~ 143 (361)
+....+.+...+.+++..++.+++|+ |++..++.++.+++.....+.++ .+..++.-.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 33444445556777888899999994 77778888888887777765443 367778889
Q ss_pred HHHhhhhhhhhHHHHHHHhcCCcc--cccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc
Q 018042 144 LLGVGVGFANQSVPLYLSEMAPAR--YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 144 l~G~~~~~~~~~~~~~~~e~~~~~--~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
+.|+..+..+..=++++++..+++ +.|..+|+.+.+..+..++..+..+.+....++ +-.+.+.+.++..++..+..
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~-~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG-GNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC-CCeeHHHHHHHHHHHHHHHH
Confidence 999999999999999999999954 459999999999999999888766664444432 44667788888888877766
Q ss_pred cc-ccCCh
Q 018042 222 LF-LPETP 228 (361)
Q Consensus 222 ~~-~~es~ 228 (361)
++ +|+++
T Consensus 468 ~~~~~~~~ 475 (477)
T TIGR01301 468 LILLPRPR 475 (477)
T ss_pred HHhCCCCC
Confidence 44 77764
No 237
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.12 E-value=0.00017 Score=68.00 Aligned_cols=134 Identities=23% Similarity=0.182 Sum_probs=99.5
Q ss_pred HHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHH---HHHHHHHHHhhhhhhhhHHHHHHHhcCCccc
Q 018042 92 YVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYM---LIFGRLLLGVGVGFANQSVPLYLSEMAPARY 168 (361)
Q Consensus 92 ~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~ 168 (361)
...........+...|++|||.....+.++..+++++.++..+... ..+...+...+.+..+.....+.+|.+|+..
T Consensus 360 ~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~ 439 (521)
T KOG0255|consen 360 GLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV 439 (521)
T ss_pred HHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 3345556666689999999999999999999999999998765443 5555666666677777778999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHH-HhcccccCChh
Q 018042 169 RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILT-LGALFLPETPN 229 (361)
Q Consensus 169 R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~-~~~~~~~es~~ 229 (361)
|..+.+.......+|.+++|.+......... .+.... .+....+.. +...++||+..
T Consensus 440 r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~--~~~~~~--~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 440 RNTAVGAISAAARLGSILAPLFPLLLRQMFP--LLGLIL--FGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchHHH--HHHHHHHHHHHHHhcCcccCC
Confidence 9999999999999999999999765554322 222222 233333443 34477999853
No 238
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.09 E-value=0.00032 Score=63.50 Aligned_cols=254 Identities=11% Similarity=0.006 Sum_probs=126.7
Q ss_pred HHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh--------h----hHHHHHHH---HHHHHhhhhhh-hh
Q 018042 91 LYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA--------V----NVYMLIFG---RLLLGVGVGFA-NQ 154 (361)
Q Consensus 91 ~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~--------~----~~~~~~~~---r~l~G~~~~~~-~~ 154 (361)
-.+..++.++..|.+.||..|.+++..+.+..-++..+.+.. + +.+....+ -.+.|...-.. ..
T Consensus 47 ~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~ 126 (432)
T PF06963_consen 47 RSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIA 126 (432)
T ss_pred HHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 345567778888999999999998766655543333322211 1 11222222 12222211111 11
Q ss_pred HHHHHHHhcC------CcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhc-ccc---
Q 018042 155 SVPLYLSEMA------PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGA-LFL--- 224 (361)
Q Consensus 155 ~~~~~~~e~~------~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~-~~~--- 224 (361)
...+.=.||. +++.+.+.++...-.-.+..+++|++.+.+.. ..+.+....+.+...++..+.= +++
T Consensus 127 ~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t---~~s~~~~~~~i~~~N~~S~~vEy~~l~~V 203 (432)
T PF06963_consen 127 NTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMT---FASPVIAAIFIAGWNLASVFVEYFLLARV 203 (432)
T ss_pred hhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112223442 23334555555555666678888888665543 2356666555555555443322 111
Q ss_pred -cCChhHHHhhCCCHHHHHHHHHHhhCCcchHHHHHHHHHHHhhhhhcccchhhhcccCchhHHHHHHHHHHHHHhcchh
Q 018042 225 -PETPNSLIQRKSDHQKAKLMLQRVRGTNDVEAEFDDLLKASSTAKTINHPFKKIIQRKYRPQLLMAMAIPFFQQVTGIN 303 (361)
Q Consensus 225 -~es~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (361)
...|. +..+++++++....... ...+.+.+....+...+.-+....+|+..++++...+.+- ..+.++.. .
T Consensus 204 Y~~~P~-L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~a-lalLY~TV----L 275 (432)
T PF06963_consen 204 YNSVPA-LAVKKRSSESESSSDEE--SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFA-LALLYFTV----L 275 (432)
T ss_pred HHhChH-hcCCCCCcccccccccc--ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHH-HHHHHHHH----h
Confidence 22232 22222211111110000 0000001111111111112223456777777644333332 22222222 2
Q ss_pred hhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 304 VIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 304 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
.+...+..|+...|+++...+..-....+.++.|.+...+ +.+|+|..+.-.
T Consensus 276 sf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~--l~~riGlvr~G~ 327 (432)
T PF06963_consen 276 SFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPW--LMKRIGLVRAGL 327 (432)
T ss_pred cCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcchhhHH
Confidence 3355666677777999999999999999999999999999 699999766543
No 239
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.93 E-value=0.00015 Score=63.58 Aligned_cols=126 Identities=10% Similarity=0.071 Sum_probs=102.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
.|.+..+.....+.+..+.++|.++..++..|+...|.+....++..+.++..+++++...+ .+-++.|+..+..+|+.
T Consensus 267 ~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~simfPTI 345 (422)
T COG0738 267 LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL-YALFLIGLFNSIMFPTI 345 (422)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHH
Confidence 47789999999999999999999999999999999999999999999999999999886554 45678889999999999
Q ss_pred HHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHH
Q 018042 157 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLA 208 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~ 208 (361)
.+...+..+ ++ ....+..-....+|..+.|.+.+.+.+.. +-...+.
T Consensus 346 fslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~---g~~~~~~ 392 (422)
T COG0738 346 FSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMF---GIQLTFL 392 (422)
T ss_pred HHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhh---hhHHHHH
Confidence 999999998 33 33444445556677788888877776543 4555554
No 240
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.93 E-value=0.00061 Score=62.21 Aligned_cols=122 Identities=11% Similarity=0.035 Sum_probs=77.2
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGG-----AAVNVYMLIFGRLLLGVG 148 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~r~l~G~~ 148 (361)
++.+|.+..+.++.......+..++..+.+.+.++.++++.......+..++.++.. ..++++..+++.++.++|
T Consensus 246 ~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G 325 (413)
T PRK15403 246 IDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFG 325 (413)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHH
Confidence 334578999999988878888888888888876555444433222222222222222 123343456778888999
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
.+...+......- .-....+|++.++.+.....+...++..++++..
T Consensus 326 ~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~ 372 (413)
T PRK15403 326 IGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWF 372 (413)
T ss_pred HHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877775332 1222347888888888777777777777666644
No 241
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.88 E-value=4e-05 Score=71.76 Aligned_cols=149 Identities=14% Similarity=0.081 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHhhchh-HHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHhhhhhhhhHHHHH
Q 018042 83 LLTSFTSSLYVAGLVASFVASSVTRAFGRK-PSVLMGGAAFLAGSALGGA--AVNVYMLIFGRLLLGVGVGFANQSVPLY 159 (361)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr-~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 159 (361)
..++....+.++..+++.+.|.+..+++|- +.++++.+++.+++-+++. .+|....+..-++.|++.|....+....
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 467788888889999999999999988764 4555676666654433333 3466666777899999999988888887
Q ss_pred HHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc--cC------------------------------C--------
Q 018042 160 LSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ--IK------------------------------G-------- 199 (361)
Q Consensus 160 ~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~------------------------------~-------- 199 (361)
..-..|+++-+.+.++....-.+|..++..+-..+-. .. +
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~i 509 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAI 509 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhC
Confidence 8778898888999998888877777666655322110 00 0
Q ss_pred -------------------CcchHHHHHhhHHHHHHHHHhcccccCChhHH
Q 018042 200 -------------------GWGWRVSLALAAVPASILTLGALFLPETPNSL 231 (361)
Q Consensus 200 -------------------~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~ 231 (361)
..++|+.|+....+.++..+..+|++|..+.+
T Consensus 510 PGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~~m 560 (599)
T PF06609_consen 510 PGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDKYM 560 (599)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhh
Confidence 02678888888888888888888888765433
No 242
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.78 E-value=0.00025 Score=65.49 Aligned_cols=130 Identities=11% Similarity=0.056 Sum_probs=87.1
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHh----hchhHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRA----FGRKPSVLMGGAAFLAGS-ALGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
.|.+..+.+.+.+.+.++.+++.+++|+++|| ..+|..+...+.+..+.. +......+.......-+....+...
T Consensus 304 ~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~ 383 (495)
T KOG2533|consen 304 GGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIA 383 (495)
T ss_pred CCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHH
Confidence 36788999999999999999999999999999 777777777666655544 4444444344444444455555666
Q ss_pred hhhHHHHHHHhcCCccccc-chhhHHHHHHHHHHHHHHHHHhhhccc-CCCcchHHHHHh
Q 018042 152 ANQSVPLYLSEMAPARYRG-AINNGFQFSIGIGALAANFINYGTEQI-KGGWGWRVSLAL 209 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~wr~~~~~ 209 (361)
..+......++...++.|. ...+....+.+.+.++++.+ .... ...++|.+.|..
T Consensus 384 ~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~---~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 384 TAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL---FRSLDAPRYGWGAVFYM 440 (495)
T ss_pred HHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh---cccccCcchhhhhHHHH
Confidence 6777778888887766553 34445555666666655555 3322 233577777733
No 243
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.75 E-value=0.0008 Score=61.66 Aligned_cols=121 Identities=10% Similarity=0.177 Sum_probs=106.3
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHhhH-HHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 73 ISNYCKFDSQLLTSFTSSLYVAGLVASFVAS-SVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
+...++++..+.+.+.+.......+++++.. .+...+|-|+++..|+..-.+...+.+++++.|+++....+.++. ..
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~ 346 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GI 346 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cc
Confidence 4667899999999988888888888888887 777778999999999999999999999999999999998888875 56
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhh
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGT 194 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (361)
..+...+.++-+.+++++|++.++....-.+..++++.+-..+
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 7888899999999999999999999999999888888874444
No 244
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.74 E-value=0.00011 Score=49.13 Aligned_cols=48 Identities=10% Similarity=0.197 Sum_probs=42.4
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHH
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAF 122 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~ 122 (361)
++.|++..++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 28 ~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 28 KQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 446899999999999999999999999999999999998877765543
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.69 E-value=0.0022 Score=59.41 Aligned_cols=134 Identities=13% Similarity=0.087 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhch--hH-----HHHHHHHHHHHHHHHhhhh---------hhHHHHHHHHHHHHh
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGR--KP-----SVLMGGAAFLAGSALGGAA---------VNVYMLIFGRLLLGV 147 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Gr--r~-----~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~l~G~ 147 (361)
.++..++..+...+.+|+.+++-.|.+| |. =+.+|+++.+++.+...++ .+.+++++.-++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 4566777777777778887777677633 21 1567777777776655431 366778889999999
Q ss_pred hhhhhhhHHHHHHHhcCCcccccchhhHHHHH-HHHHHHHHHHHHhhhcccC---------CCcchHHHHHhhHHHHHHH
Q 018042 148 GVGFANQSVPLYLSEMAPARYRGAINNGFQFS-IGIGALAANFINYGTEQIK---------GGWGWRVSLALAAVPASIL 217 (361)
Q Consensus 148 ~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~---------~~~~wr~~~~~~~~~~~~~ 217 (361)
|+-...|...+.+++..|++.|+..++.+... ..+|..++..++....... +...+...|...+..+++.
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998774 4688888777766553211 0113555666655555444
No 246
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.66 E-value=0.0014 Score=57.02 Aligned_cols=133 Identities=16% Similarity=0.113 Sum_probs=86.5
Q ss_pred hhhhccccccccccccCChHHHHhhchhhhhcccccccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHH-----hh
Q 018042 35 GGVIFGYDIGISGGVTSMEPFLEKFFPEVHRKMKEDTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTR-----AF 109 (361)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~ 109 (361)
-..++|.-.+..+ ++|.++ +.-|+|-++.+..+.++. -.--.+++.++.| |+
T Consensus 39 LYllQGiP~GL~~---~iP~lL------------------~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~ 95 (510)
T KOG3574|consen 39 LYLLQGIPLGLIG---AIPLLL------------------QAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRF 95 (510)
T ss_pred HHHHcCCchhHhh---hhHHHh------------------cCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhh
Confidence 4577788777765 223333 333667766666543322 1234667788888 99
Q ss_pred chhHHHHH-HHHHHHHHHHHhhh-----------hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHH
Q 018042 110 GRKPSVLM-GGAAFLAGSALGGA-----------AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQ 177 (361)
Q Consensus 110 Grr~~l~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~ 177 (361)
||||.-++ +..+.+..+...+. .++...+....++.-+..+.....+-.+.-.+..+++-|.+.....
T Consensus 96 GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~ 175 (510)
T KOG3574|consen 96 GRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQS 175 (510)
T ss_pred ccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHH
Confidence 99986544 33333333333332 2344445455677777778888888888888888999998888888
Q ss_pred HHHHHHHHHHHHH
Q 018042 178 FSIGIGALAANFI 190 (361)
Q Consensus 178 ~~~~~g~~~~~~~ 190 (361)
.+...|..++..+
T Consensus 176 Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 176 VGQTAGYFLGNVV 188 (510)
T ss_pred HHHhhhHHhhcce
Confidence 8888888877666
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.65 E-value=0.00055 Score=59.60 Aligned_cols=123 Identities=13% Similarity=0.083 Sum_probs=109.8
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc--hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG--RKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGF 151 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 151 (361)
.+.+|.++.+.|.+.+...++..+.+....+..||.. -+-.+..++.++.-..++.+.++....+..+-.+-.+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 4668999999999998888999999999999999987 77777788888887888888889999999999999999999
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
..+....++....|.++||..+|+......++-++||.+++.+..
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 999999999999999999999999999999999999999866654
No 248
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.63 E-value=0.00093 Score=59.55 Aligned_cols=135 Identities=17% Similarity=0.189 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcC
Q 018042 85 TSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMA 164 (361)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~ 164 (361)
+.+.-+-.+-..+..+.+.++.+|+.-+.-+.+..++..++.++.+++++.+.-+++-.+.+++.|........+.+ .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 33444444556677777888889876555556666788889999999999999999999999999998888877644 55
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc-ccC
Q 018042 165 PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF-LPE 226 (361)
Q Consensus 165 ~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~-~~e 226 (361)
++ ...+.+..+.+.+.++|...-..+.. -..+-|..+.+...+.++..+..++ +|.
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~--~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT--LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH--hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 53 34677788888888887776555554 1234566776666555555544444 443
No 249
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.60 E-value=4.2e-05 Score=51.17 Aligned_cols=63 Identities=14% Similarity=0.147 Sum_probs=54.6
Q ss_pred HHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeec
Q 018042 293 IPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDI 357 (361)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~ 357 (361)
..++..+++...+..|.|.++++.|+++.+.+.+..+..+..+++.++.|. ++||.++++...
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~--laDk~~~~~~~l 69 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGF--LADKFGKRKVIL 69 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCccHHHH
Confidence 344555666778899999999999999999999999999999999999999 699999987654
No 250
>PTZ00207 hypothetical protein; Provisional
Probab=97.58 E-value=0.00053 Score=64.63 Aligned_cols=135 Identities=9% Similarity=-0.035 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHH---h------hchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHH
Q 018042 87 FTSSLYVAGLVASFVASSVTR---A------FGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVP 157 (361)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~l~d---~------~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 157 (361)
+.++..++..+|-+..|.++. | +.|--.+.+..+ +.++.++..+.-....+++.-++.|++.|..++...
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 667777777777777777662 1 112223333444 556666665553336899999999999999999999
Q ss_pred HHHHhcCCcccccchhhHHHHHHHHHHHHH-HHHHhhhcccC----------CCcchHHHHHhhHHHHHHHHHhccc
Q 018042 158 LYLSEMAPARYRGAINNGFQFSIGIGALAA-NFINYGTEQIK----------GGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 158 ~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~----------~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
..++|+|- |+-|+-..+......+|+.+- ..+.+.+.+.. +..=.|..|++.+.+++...+....
T Consensus 475 ~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 475 LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 99999999 888888888888888887765 33333222111 0112678888887777777665533
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.50 E-value=0.00056 Score=61.53 Aligned_cols=108 Identities=19% Similarity=0.331 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhh---------hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCccc---ccchhhHHHHHH
Q 018042 113 PSVLMGGAAFLAGSALGGAAV---------NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARY---RGAINNGFQFSI 180 (361)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~---R~~~~~~~~~~~ 180 (361)
+++.++.++..+|.++..++. +.+.++++-.+.++|.|..-+....+++|.+++++ |.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888899999988855432 23578889999999999999999999999998763 456677889999
Q ss_pred HHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 181 GIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 181 ~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
++|..++..+...+. ++.+|.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~---~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQ---QNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHH---HCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhc---cccchhhhhhHHHHHHHHHHHHHHh
Confidence 999999988855555 4468999999988777766655443
No 252
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.42 E-value=0.024 Score=52.49 Aligned_cols=117 Identities=9% Similarity=0.011 Sum_probs=79.2
Q ss_pred CchhHHHHHHHHHH-HHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh---------h----------------
Q 018042 80 DSQLLTSFTSSLYV-AGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA---------V---------------- 133 (361)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---------~---------------- 133 (361)
+++.+..+-....+ ...+...+..+++++++|.+++-+....+.....+.++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 55566666654444 445667778999999999998877666665555555542 0
Q ss_pred ------hHHHHHHHHHHHHhhhhhhhh-HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 134 ------NVYMLIFGRLLLGVGVGFANQ-SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 134 ------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
+.|.+.+.-++.-+-...... .-..+.+|.++.+|-.+..+++..+.++|.++++.+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333333333333333333 457888999999999999999999999999988888766665
No 253
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.37 E-value=0.00042 Score=59.43 Aligned_cols=157 Identities=13% Similarity=0.086 Sum_probs=113.7
Q ss_pred cCCchhHH-HHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 78 KFDSQLLT-SFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 78 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
|++.++.. -+.-...-.+.+.-.+.-.+.|..--|++++.-.+.......+.-+.++.+.+=+.-+..|...+. ...-
T Consensus 37 NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-EIAY 115 (433)
T KOG3810|consen 37 NLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-EIAY 115 (433)
T ss_pred CccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH-HHhh
Confidence 45544433 233344455667777778899999999999988888888888888999999998889999987654 5678
Q ss_pred HHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCChhHHHhhCC
Q 018042 157 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPETPNSLIQRKS 236 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es~~~~~~~~~ 236 (361)
++|+-+..+++++.++.+...+..-.|...|..++..+.... ..+.+..-.+......+.....+|+|..+|.+..+++
T Consensus 116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~-~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~ 194 (433)
T KOG3810|consen 116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLE-TLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRL 194 (433)
T ss_pred hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhc-ccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcc
Confidence 889999999999999999988888888888888777666442 2345555455555445555566788877765544433
No 254
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.0012 Score=54.72 Aligned_cols=90 Identities=12% Similarity=0.190 Sum_probs=68.4
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
-+.++....+++.+....+-..++...+.|-++|+-|||+.-+.-++..+++|+ .-.++.+-.++++|.+.|+..+..+
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHH
Confidence 455677888888777666666677888899999999999976655555555443 3357888999999999999998888
Q ss_pred hHHHHH-HHhcC
Q 018042 154 QSVPLY-LSEMA 164 (361)
Q Consensus 154 ~~~~~~-~~e~~ 164 (361)
..-.++ ++|.-
T Consensus 143 SaFEsWliaEHn 154 (454)
T KOG4332|consen 143 SAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHhh
Confidence 777665 56654
No 255
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.27 E-value=0.0022 Score=58.83 Aligned_cols=151 Identities=9% Similarity=0.053 Sum_probs=110.2
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh----------hhhHHHHHHHHHHHHh
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA----------AVNVYMLIFGRLLLGV 147 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~r~l~G~ 147 (361)
|+++...+.+..+..++..+|..+......++.-|+++..+.++..+..+.... .++.+..+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 478899999998888999999999988888889899988888877766654322 1233333344677777
Q ss_pred hhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCC-----cchHHHHHhhHHHHHHHHHhcc
Q 018042 148 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGG-----WGWRVSLALAAVPASILTLGAL 222 (361)
Q Consensus 148 ~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~wr~~~~~~~~~~~~~~~~~~ 222 (361)
..+..+-+...+++|.+|+..-|...++.....++|..++..++..+.+..+- .+-.+..++..+..++......
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~ 410 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLF 410 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 77777888889999999999999999999999999988888888777654321 1223444555555555555555
Q ss_pred cccCCh
Q 018042 223 FLPETP 228 (361)
Q Consensus 223 ~~~es~ 228 (361)
++|+..
T Consensus 411 lLp~~~ 416 (433)
T PF03092_consen 411 LLPPQK 416 (433)
T ss_pred HcCCCc
Confidence 677653
No 256
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.20 E-value=0.0061 Score=57.55 Aligned_cols=145 Identities=15% Similarity=0.123 Sum_probs=106.9
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhh-chhHHHHHHHHHHHHHHHHhhhhhh------------------
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMGGAAFLAGSALGGAAVN------------------ 134 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~l~~~~~~~~~~~~~~~~~~~------------------ 134 (361)
.+++|.+...+....+.+.-.....++..+.++|-| ||-+++.++.++..++..+..++..
T Consensus 65 t~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c 144 (571)
T KOG1237|consen 65 TLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVC 144 (571)
T ss_pred HHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcc
Confidence 455566777777777777777788889999999986 9999999999988888655544211
Q ss_pred -------HHHHHHHHHHHHhhhhhhhhHHHHHHHhcCC---ccc---ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCc
Q 018042 135 -------VYMLIFGRLLLGVGVGFANQSVPLYLSEMAP---ARY---RGAINNGFQFSIGIGALAANFINYGTEQIKGGW 201 (361)
Q Consensus 135 -------~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~---~~~---R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 201 (361)
...+..+..+..+|.|+.-+...++-+|-++ +++ +...+..+....++|..++..+....+ ++.
T Consensus 145 ~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq---~~~ 221 (571)
T KOG1237|consen 145 ESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ---DNV 221 (571)
T ss_pred cCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh---hcc
Confidence 1245566778888999999999999999998 322 235667788888889888877744443 456
Q ss_pred chHHHHHhhHHHHHHHHHhc
Q 018042 202 GWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 202 ~wr~~~~~~~~~~~~~~~~~ 221 (361)
+|.+.|.+..+...+..++.
T Consensus 222 ~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 222 GWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred cceeeccHHHHHHHHHHHHH
Confidence 89999988766655544433
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.03 E-value=0.0045 Score=56.61 Aligned_cols=135 Identities=12% Similarity=0.058 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHH-hhh-------hhhHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 018042 90 SLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL-GGA-------AVNVYMLIFGRLLLGVGVGFANQSVPLYLS 161 (361)
Q Consensus 90 ~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~-~~~-------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 161 (361)
...+...+..+....+..|+..|.=+..++++..+..++ ..+ ...++..++.-++.|++.+.......++.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 334444444455555556666533333343322221111 111 135666677788899999888888888666
Q ss_pred hcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCC---cchH--HHHHhhHHHHHHHHHhcccccCChh
Q 018042 162 EMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGG---WGWR--VSLALAAVPASILTLGALFLPETPN 229 (361)
Q Consensus 162 e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~wr--~~~~~~~~~~~~~~~~~~~~~es~~ 229 (361)
.+|++. +..+..+.+++.+++.++........++ ..++ ..|.+..++.++.++....++..|-
T Consensus 133 -~fp~~~----~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 133 -VFPSTY----SSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred -cCCHHH----HHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 567554 3444444555544444443322211111 1222 2233344444444444455666653
No 258
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.01 E-value=0.055 Score=49.39 Aligned_cols=106 Identities=22% Similarity=0.325 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHh---hchhHHHHHHHHHHHHHHHHhhhh------------------hhHHHHHHHH
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRA---FGRKPSVLMGGAAFLAGSALGGAA------------------VNVYMLIFGR 142 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~---~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r 142 (361)
.+...-...+|..+++.+.+.+++| +||++.+.++..+..+++++.... +++....++-
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHH
Confidence 3444444556666777777777765 799999999988888888877653 2466777888
Q ss_pred HHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHH
Q 018042 143 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI 190 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~ 190 (361)
++.|++-+......+.++.+.+ ++.|..+.+++-.-..++..++...
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999 5778888888877777777665444
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.98 E-value=0.0039 Score=56.52 Aligned_cols=118 Identities=13% Similarity=0.028 Sum_probs=66.6
Q ss_pred cCCchhHHHHHH---HHHHHHHHHHHhhHHHHHhhchhHHHHHH-HHHHHHHHHHhhhhh--------------------
Q 018042 78 KFDSQLLTSFTS---SLYVAGLVASFVASSVTRAFGRKPSVLMG-GAAFLAGSALGGAAV-------------------- 133 (361)
Q Consensus 78 ~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~d~~Grr~~l~~~-~~~~~~~~~~~~~~~-------------------- 133 (361)
++|.++.+.++- -+.+=..-++++=...+.|+||||..++- -.+.++..+..+...
T Consensus 33 ~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~ 112 (544)
T PF13000_consen 33 KVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGEST 112 (544)
T ss_pred CCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCc
Confidence 556666665431 12222233444445556689999876552 233333333222111
Q ss_pred ----hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 134 ----NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 134 ----~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
+...+....++.=+-.+.....+-.+.-.+..+++++.+......+.++|..++..+-..+.
T Consensus 113 ~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 113 VNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred ccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 11123333434444456666666677777788899998888888888888887766644333
No 260
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.90 E-value=0.26 Score=44.95 Aligned_cols=117 Identities=8% Similarity=-0.001 Sum_probs=83.0
Q ss_pred CchhHHHHHHHHHH-HHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh----------------------h---
Q 018042 80 DSQLLTSFTSSLYV-AGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA----------------------V--- 133 (361)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~----------------------~--- 133 (361)
+++.+..+-+...+ +..+..++.+++.+++.|.+++-+.+..+....+++++. |
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45566777777767 667888899999999999999887777777666666652 1
Q ss_pred -------hHHHHHHHHHHHHhhhhhhhh-HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 134 -------NVYMLIFGRLLLGVGVGFANQ-SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 134 -------~~~~~~~~r~l~G~~~~~~~~-~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
+.|...+.-.+.-+-.+.... .-.....|.+..+|-.+..++++.+.+++..++..+...+..
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 113333333333333333333 445678999999999999999999999999888888666654
No 261
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.86 E-value=0.032 Score=50.83 Aligned_cols=138 Identities=15% Similarity=0.070 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhchh-------HHHHHHHHHHHHHHHHhhhh----------hhHHHHHHHHHHHH
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGRK-------PSVLMGGAAFLAGSALGGAA----------VNVYMLIFGRLLLG 146 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~G 146 (361)
..+..+...+..++.+++..++..+.+++ .-+-+++.+++.+.++.... .+.++++..-++++
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35566777777777787877777775544 23345555555555544433 36788999999999
Q ss_pred hhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc---cCCCcchHHHHHhhHHHHHHHHHhc
Q 018042 147 VGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ---IKGGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 147 ~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
+|+=...|+..++++...|++-.+..++.+......|..++..++..... ..+...-...|+..+...++..+..
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888887777552110 1122234455666666555554443
No 262
>PRK03612 spermidine synthase; Provisional
Probab=96.85 E-value=0.07 Score=50.16 Aligned_cols=116 Identities=12% Similarity=-0.018 Sum_probs=65.3
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHH---HHHHHh----hhhhhH-HHHHHHHHHHHhhh
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFL---AGSALG----GAAVNV-YMLIFGRLLLGVGV 149 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~---~~~~~~----~~~~~~-~~~~~~r~l~G~~~ 149 (361)
|-+....+.+.+++.+|..+|+.+++++.++--|+... +-..+.. ++..+. ++.... ..++..-++.++..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-VELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55777889999999999999999998876443333221 1111111 111111 111111 12233355667778
Q ss_pred hhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 150 GFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 150 ~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
|...|....+..+... ++-+...+-......+|+++|.++..++.
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 8877777776655332 12344556666667777777776654443
No 263
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.68 E-value=0.024 Score=50.72 Aligned_cols=114 Identities=11% Similarity=0.011 Sum_probs=84.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHH---HHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFL---AGSALGGAAVNVYMLIFGRLLLGVGVGFANQSV 156 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 156 (361)
..++..+....+.+|..++.--...+ |+-|-+.+.+-..+.. +.....-+.+++|..++.-+..|+..|..+...
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 46777888888888887765443322 3433333322222222 222333456899999999999999999999999
Q ss_pred HHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 157 PLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 157 ~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
...+.|-.++++|..+++....+.++|..++.+++..+.
T Consensus 357 F~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876554
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.37 E-value=0.16 Score=46.36 Aligned_cols=118 Identities=18% Similarity=0.125 Sum_probs=88.7
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh------hh----hHHHHHHHHHHHHh
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA------AV----NVYMLIFGRLLLGV 147 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~------~~----~~~~~~~~r~l~G~ 147 (361)
|++...+|.+-+...+....+.+...++.+|+|..+.=+.+.........++.. .+ +...++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999888777666554433333322 12 33444444455555
Q ss_pred hhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 148 GVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 148 ~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
|.=...-...-++.|..|+++||...+.-....++-.++...+...+.
T Consensus 369 GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 369 GLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 555667788888999999999999999988888888777777755444
No 265
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.72 E-value=0.024 Score=52.05 Aligned_cols=58 Identities=9% Similarity=0.059 Sum_probs=47.7
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhH-HHHHHHHHHHHHHHHhhhh
Q 018042 75 NYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKP-SVLMGGAAFLAGSALGGAA 132 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~-~l~~~~~~~~~~~~~~~~~ 132 (361)
+++|+++.+.|.+...-.+..+++.|++|+++|||-+|+ .++.+.+....+.++..+.
T Consensus 39 kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 39 KQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred HHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 445999999999999999999999999999999997655 4555666677777777665
No 266
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.62 E-value=0.048 Score=48.98 Aligned_cols=150 Identities=12% Similarity=0.006 Sum_probs=87.9
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhc-hhHHHHHHHHHHHHHHHHhh-hh---hhHHHHHHHHHHHHhhhhhh
Q 018042 78 KFDSQLLTSFTSSLYVAGLVASFVASSVTRAFG-RKPSVLMGGAAFLAGSALGG-AA---VNVYMLIFGRLLLGVGVGFA 152 (361)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~G-rr~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~r~l~G~~~~~~ 152 (361)
|.+....|+......++.++++.+.|.+.||.. -|.+.++......++.+... +. .+.+.+...-.+.|.+....
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~ 376 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY 376 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC
Confidence 345567899999999999999999999999985 45555665555555532222 21 23344555567778888888
Q ss_pred hhHHHHHHHhcCCcccccchhhHHHH-HHHHHHHHHHHHHhhhcccCCCcchHHHH-HhhHHHHHHHHHhcccccCCh
Q 018042 153 NQSVPLYLSEMAPARYRGAINNGFQF-SIGIGALAANFINYGTEQIKGGWGWRVSL-ALAAVPASILTLGALFLPETP 228 (361)
Q Consensus 153 ~~~~~~~~~e~~~~~~R~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~wr~~~-~~~~~~~~~~~~~~~~~~es~ 228 (361)
.|....+-.|..-|..-+...|+... +...|..+-...+....... ..+|.... +......++..++..+++|..
T Consensus 377 ~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 377 LPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG-PPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred CCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC-CCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 88888887887544444444555443 33334333333333333222 12344433 334444444455556665543
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.29 E-value=0.88 Score=40.80 Aligned_cols=36 Identities=14% Similarity=0.088 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccc
Q 018042 133 VNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYR 169 (361)
Q Consensus 133 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R 169 (361)
..++..++.-.+.+.+.|..........++ +|+|+-
T Consensus 115 ~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~yt 150 (406)
T KOG1479|consen 115 GFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYT 150 (406)
T ss_pred hhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHH
Confidence 355666777888888888888888886655 566654
No 268
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.13 E-value=0.029 Score=54.15 Aligned_cols=68 Identities=7% Similarity=-0.067 Sum_probs=53.5
Q ss_pred HHHHHHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecccC
Q 018042 291 MAIPFFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYTL 360 (361)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~~ 360 (361)
..+..+.+......+..-++.+.++++++..+.+++.+.+.++..++.++.++ +.||.+||+++.++.
T Consensus 38 ~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~--~~~r~~r~~~i~~g~ 105 (633)
T TIGR00805 38 LTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSY--FGTKLHRPIVIGIGC 105 (633)
T ss_pred HHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHH--hhcccCcceEEEecH
Confidence 33344544444445566667777788999999999999999999999999999 699999999988764
No 269
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=93.32 E-value=0.28 Score=44.45 Aligned_cols=118 Identities=15% Similarity=0.118 Sum_probs=66.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchh----HHHHHHHHHHHHH-------HHHhhh-hhhHHHHHHHHHHHH
Q 018042 79 FDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRK----PSVLMGGAAFLAG-------SALGGA-AVNVYMLIFGRLLLG 146 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr----~~l~~~~~~~~~~-------~~~~~~-~~~~~~~~~~r~l~G 146 (361)
.+..+..++..+...+..+|.+++|.++||+-|+ ....+..+....+ ..+... ..+...+....++.|
T Consensus 280 ~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g 359 (493)
T KOG1330|consen 280 FDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVG 359 (493)
T ss_pred CccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 3555566777888888899999999999995332 1222222222111 111111 122222223344444
Q ss_pred hhhh-hhhhHHHHHHHhcCCcccccchhhHHH-HHHHHHHHHHHHHHhhhcc
Q 018042 147 VGVG-FANQSVPLYLSEMAPARYRGAINNGFQ-FSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 147 ~~~~-~~~~~~~~~~~e~~~~~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 196 (361)
.... ..+.+..-...|..|++.|..+.++-. ....+|..-+|.+-+.+.+
T Consensus 360 ~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493)
T KOG1330|consen 360 ETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493)
T ss_pred HHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHH
Confidence 4322 234555667889999999999999855 4455566666634444444
No 270
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.20 E-value=0.025 Score=49.40 Aligned_cols=20 Identities=25% Similarity=0.200 Sum_probs=0.0
Q ss_pred HHhhhhhhcccccccchhhH
Q 018042 325 QLSKWIECGGSIGFGRNMWV 344 (361)
Q Consensus 325 ~~~~~~~~~~~~g~~~~~~~ 344 (361)
..+..+.++..+|+.+..+.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHhcchhccee
Confidence 45667899999999998873
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.11 E-value=1.5 Score=40.38 Aligned_cols=111 Identities=9% Similarity=-0.039 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhchh--HHHHH--HHHHHHHHHHHhhh---------hhhHHHHHHHHHHHHhhhh
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGRK--PSVLM--GGAAFLAGSALGGA---------AVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr--~~l~~--~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~~~~ 150 (361)
.-.....++++-.+|..+..+.. .-++| +.++. .=+++.-..++|.. -++-+..++.-++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34556666777777776554321 11223 33222 22223333333322 2466777788999999999
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
-..+.+..+..+..++++|..+..+...+..+|..+|..++..+.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888866554
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=92.16 E-value=0.063 Score=44.65 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=36.1
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhhhc-c--cCCCcchHHHHHhhHHHHHHHHHhcccc
Q 018042 167 RYRGAINNGFQFSIGIGALAANFINYGTE-Q--IKGGWGWRVSLALAAVPASILTLGALFL 224 (361)
Q Consensus 167 ~~R~~~~~~~~~~~~~g~~~~~~~~~~~~-~--~~~~~~wr~~~~~~~~~~~~~~~~~~~~ 224 (361)
|+|+........++++|.++..+.-. .. + ......|++.+.+.+++..+.+++...+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~-~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFL-ISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHH-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56777777778888888876544311 22 1 1112369999988887777666655433
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.09 E-value=2.9 Score=37.61 Aligned_cols=113 Identities=15% Similarity=0.094 Sum_probs=76.9
Q ss_pred CchhHHHHHHH-HHHHHHHHHHhhHHHHHhhchhHHHHHHHHH-HHHHHHHh-------hhhhhHHHHHHHHHHHHhhhh
Q 018042 80 DSQLLTSFTSS-LYVAGLVASFVASSVTRAFGRKPSVLMGGAA-FLAGSALG-------GAAVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~-~~~~~~~~-------~~~~~~~~~~~~r~l~G~~~~ 150 (361)
+......+... +++.-.+|.+.+.++-++ +||+..+...+= ..+-.+.. ..-.+-+++++...+.|+..|
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnG 358 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNG 358 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccc
Confidence 34445555666 888888887776666544 344433332221 11112211 123566778888999999999
Q ss_pred hhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhh
Q 018042 151 FANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYG 193 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 193 (361)
-.......+..+..+++++-.+..+.......|...|..++..
T Consensus 359 Yltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred hHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 8888888999999999999888888888888888888777443
No 274
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.33 E-value=1.3 Score=38.16 Aligned_cols=113 Identities=10% Similarity=-0.001 Sum_probs=79.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHh-hchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYL 160 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 160 (361)
+|.-|....|.+|..++.-.....--+ .=--..+..-.+++.+...+..+.++++...+.-+..|+-.|..+....--+
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i 367 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNI 367 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHH
Confidence 346788877777765433222111111 0011223334445555566677789999999999999999899998888888
Q ss_pred HhcCCcccccchhhHHHHHHHHHHHHHHHHHhhh
Q 018042 161 SEMAPARYRGAINNGFQFSIGIGALAANFINYGT 194 (361)
Q Consensus 161 ~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (361)
.+-.++++|-.+++....+-.+|..++..++..+
T Consensus 368 ~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 368 HKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred hhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 8888999999999999999999998888886443
No 275
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=89.60 E-value=0.39 Score=42.16 Aligned_cols=43 Identities=14% Similarity=-0.040 Sum_probs=34.1
Q ss_pred HHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceee
Q 018042 312 LFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLD 356 (361)
Q Consensus 312 ~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~ 356 (361)
..+++|++..+.+.++....+.+.+...+.|. +.||+|||+.-
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~--laD~~Grk~~c 102 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGS--LADRYGRKKAC 102 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCchHHH
Confidence 34678999999988888877777776667776 59999999763
No 276
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.35 E-value=0.22 Score=45.02 Aligned_cols=85 Identities=16% Similarity=0.088 Sum_probs=63.1
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS 155 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 155 (361)
.|+-....-.|-..++.+...+.+....++.||+|-|+.+..+...+.++..+.+..++.+....-+-..|+-.+....+
T Consensus 326 ~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~ 405 (498)
T KOG0637|consen 326 LYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTV 405 (498)
T ss_pred HHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcc
Confidence 34444455556667777888889999999999999888888887778888888888888888888888888554444443
Q ss_pred HHHHH
Q 018042 156 VPLYL 160 (361)
Q Consensus 156 ~~~~~ 160 (361)
-...+
T Consensus 406 p~~l~ 410 (498)
T KOG0637|consen 406 PYGAL 410 (498)
T ss_pred cHHHH
Confidence 33333
No 277
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=89.33 E-value=0.61 Score=43.02 Aligned_cols=79 Identities=13% Similarity=0.214 Sum_probs=58.4
Q ss_pred HHHHHH-HHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHH
Q 018042 136 YMLIFG-RLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPA 214 (361)
Q Consensus 136 ~~~~~~-r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~ 214 (361)
+.++++ -++.|++.-.......++-+|...+++++.+.++++.....+..++|++....... .|.|+...+.+...
T Consensus 388 ~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~---~g~~~v~~~~~~~~ 464 (488)
T KOG2325|consen 388 ILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL---SGPRPVWIILLCLL 464 (488)
T ss_pred hhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh---cCccHHHHHHHHHH
Confidence 344554 45677777777778888999999999999999999999999999999985554433 46776665544444
Q ss_pred HHH
Q 018042 215 SIL 217 (361)
Q Consensus 215 ~~~ 217 (361)
++.
T Consensus 465 l~~ 467 (488)
T KOG2325|consen 465 LVV 467 (488)
T ss_pred HHH
Confidence 433
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=88.07 E-value=10 Score=34.39 Aligned_cols=98 Identities=11% Similarity=0.024 Sum_probs=71.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHH--HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHH
Q 018042 81 SQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVL--MGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPL 158 (361)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 158 (361)
...-|.+-++..+...++.+..|++..++.+-.-+. ...++.+...++++..+|+|..+++-++.+.......+.+..
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~ 363 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASF 363 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334477778888888899999999977777754443 344555566667788899999999988888887777777777
Q ss_pred HHHhcCCcccccchhhHHHH
Q 018042 159 YLSEMAPARYRGAINNGFQF 178 (361)
Q Consensus 159 ~~~e~~~~~~R~~~~~~~~~ 178 (361)
-++.....+.-+...|+...
T Consensus 364 qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 364 QIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHhccccceeeeeeeHHH
Confidence 77777766666666666543
No 279
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=87.85 E-value=0.14 Score=34.73 Aligned_cols=53 Identities=19% Similarity=-0.015 Sum_probs=42.5
Q ss_pred hhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 304 VIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 304 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.....+|.+.++.++|..+++++.+...+|-.+|.+.... +.++..+++.+..
T Consensus 10 ayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~--~~~~~~~~~~~~~ 62 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASR--LPRHSRPRRLLRA 62 (85)
T ss_pred HHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHhcccHHHHHHH
Confidence 3456788888999999999999999999999999999988 4666555554433
No 280
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.22 E-value=12 Score=31.93 Aligned_cols=132 Identities=15% Similarity=0.080 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhchh--HHHHHHHHHHHHHHHHhhh----hh---hHHHHHHHHHHHHhhhhhhhh
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRAFGRK--PSVLMGGAAFLAGSALGGA----AV---NVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~~~~----~~---~~~~~~~~r~l~G~~~~~~~~ 154 (361)
-|.+.+.++++.++|+-+...+..|-..| +...+..++.++...+... +| ++..-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47788888888888888887777765443 3444444443333332222 22 222334555666677888999
Q ss_pred HHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccCC-CcchHHHHHhhHHHHHHHHH
Q 018042 155 SVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIKG-GWGWRVSLALAAVPASILTL 219 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~wr~~~~~~~~~~~~~~~ 219 (361)
....+-++..|.+.|...+.++-....+-..++-. ..+..+ ..+=|..|-++.+...+..+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLy----nlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLY----NLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhe----ecccccCccccchhhhhhHHHHHHHHH
Confidence 99999999999999998888876654433222111 111111 23556777777766655544
No 281
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=86.52 E-value=0.72 Score=38.72 Aligned_cols=58 Identities=16% Similarity=0.102 Sum_probs=48.0
Q ss_pred hcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 299 VTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
....+.+..|.|.+-++.|+|.++...+.....+|..+| +..|. +.|++|.+.++.+|
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~--l~d~~gp~~~l~iG 72 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGL--LYDRFGPWVVLLIG 72 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHH--HHHhcchHHHHHHH
Confidence 345678889999988889999999999999999998876 66677 59999998876654
No 282
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=86.49 E-value=3.1 Score=36.27 Aligned_cols=72 Identities=21% Similarity=0.224 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcC
Q 018042 92 YVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMA 164 (361)
Q Consensus 92 ~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~ 164 (361)
.+..+.++++.+.+..++|.|+++.++.......-.. -+-+.+..++-.-.+.|++.+..+..--.|+++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3455667777779999999999988877766553322 23467788888899999999988877777766654
No 283
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=86.02 E-value=6.8 Score=36.41 Aligned_cols=94 Identities=12% Similarity=0.065 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhchh--HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 018042 85 TSFTSSLYVAGLVASFVASSVTRAFGRK--PSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSE 162 (361)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e 162 (361)
|..-++..+..++..+..|++-.++.+- ..+.+..++.+...++++.++|+|..+++-++.+.......+....-++.
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~ 380 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIAS 380 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566667777888899999997777553 34444455555556677888999999999999999998888888888888
Q ss_pred cCCcccccchhhHHHH
Q 018042 163 MAPARYRGAINNGFQF 178 (361)
Q Consensus 163 ~~~~~~R~~~~~~~~~ 178 (361)
....+.-+...|+..+
T Consensus 381 ~L~~~~~aLvFGiNtf 396 (511)
T TIGR00806 381 SLSKELCALVFGINTF 396 (511)
T ss_pred HhcccceEEEEecHHH
Confidence 8877766887777554
No 284
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.55 E-value=7.6 Score=27.39 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhh-chhHHHHHH
Q 018042 86 SFTSSLYVAGLVASFVASSVTRAF-GRKPSVLMG 118 (361)
Q Consensus 86 ~~~~~~~~~~~~~~~~~g~l~d~~-Grr~~l~~~ 118 (361)
.-.+.=+++..+.....||+.||| |.++..++.
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 334555667777777889999997 666554443
No 285
>PRK11469 hypothetical protein; Provisional
Probab=77.94 E-value=19 Score=28.78 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=22.4
Q ss_pred HHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHH
Q 018042 96 LVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL 128 (361)
Q Consensus 96 ~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 128 (361)
..|..+..++.+++|||.-++-|.++..++.-+
T Consensus 149 ~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 149 TLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445556667788888887788777776543
No 286
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=75.97 E-value=25 Score=26.90 Aligned_cols=80 Identities=19% Similarity=0.159 Sum_probs=49.4
Q ss_pred HHHHhhchhHHHHHHH------HHHHHHHHHhhh----hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchh
Q 018042 104 SVTRAFGRKPSVLMGG------AAFLAGSALGGA----AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAIN 173 (361)
Q Consensus 104 ~l~d~~Grr~~l~~~~------~~~~~~~~~~~~----~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~ 173 (361)
.++||.-||..+..|. ..+.++..+..- .+++..++....+.|+|. ..+.+..++--+++++-|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcc
Confidence 4678887776665442 222222222211 255566666666666653 345666777778888889999
Q ss_pred hHHHHHHHHHHHH
Q 018042 174 NGFQFSIGIGALA 186 (361)
Q Consensus 174 ~~~~~~~~~g~~~ 186 (361)
|+-.+-.+++-+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9988888877654
No 287
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=75.95 E-value=3.2 Score=35.86 Aligned_cols=133 Identities=11% Similarity=0.053 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcC
Q 018042 85 TSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMA 164 (361)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~ 164 (361)
|...-+-.+-..+..+.+....||+---+-..+..++.+.+..+.+++.+.++-+.+-.+..++.|.....-..+. ..+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SRY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-ccC
Confidence 3333344455566677777788886333333445566778888889999999999999999998887766555543 333
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhccc
Q 018042 165 PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALF 223 (361)
Q Consensus 165 ~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~ 223 (361)
++. ..+.+..+.+.+..+|..--..+.+. .+.+-|-..++...+.++.....++
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~~-~~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTSW-ANLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhhh-cCCChhhHHHHHHHHHHHHHHHHHh
Confidence 332 23334444443344443332223332 2245676776666555555555544
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=74.81 E-value=1.2 Score=38.98 Aligned_cols=107 Identities=13% Similarity=0.131 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHh-hchhHHHHH--HHHHHHHHHHHhh----------hhhhHHHHHHHHHHHHhhhhhhh
Q 018042 87 FTSSLYVAGLVASFVASSVTRA-FGRKPSVLM--GGAAFLAGSALGG----------AAVNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~l~d~-~Grr~~l~~--~~~~~~~~~~~~~----------~~~~~~~~~~~r~l~G~~~~~~~ 153 (361)
....++++-.+|..+.++..-+ -.+|+..+. .=+++.-..+++- .-+|-+.+++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556778888888877654211 134444332 1222222222221 22455677788999999999999
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhh
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYG 193 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~ 193 (361)
+....+..+..++++|..+..+...+..+|..+|..++..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888888888777543
No 289
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=74.34 E-value=51 Score=27.69 Aligned_cols=19 Identities=5% Similarity=0.003 Sum_probs=12.1
Q ss_pred chhhHHHHhhhccceeeccc
Q 018042 340 RNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 340 ~~~~~~l~dr~grr~~~~~~ 359 (361)
++|.. ++.|+..|++.++|
T Consensus 258 igGk~-lAskIS~rtVt~~g 276 (294)
T KOG2881|consen 258 IGGKY-LASKISVRTVTLIG 276 (294)
T ss_pred hhhHH-HhhhheeEEEEEec
Confidence 34443 57888878776554
No 290
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=73.79 E-value=16 Score=32.38 Aligned_cols=94 Identities=12% Similarity=0.103 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhchhH--HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHh
Q 018042 85 TSFTSSLYVAGLVASFVASSVTRAFGRKP--SVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSE 162 (361)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~g~l~d~~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e 162 (361)
|..-.+..+..+++.+..|++.-++.|.. .+.++.+..+...++++.+.++|..+++-++.+.......+....-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 45556677888899999999988887763 4444555556666677778899999988888887777777788777888
Q ss_pred cCCcccccchhhHHHH
Q 018042 163 MAPARYRGAINNGFQF 178 (361)
Q Consensus 163 ~~~~~~R~~~~~~~~~ 178 (361)
-...+.-|...|+...
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 8777777777776554
No 291
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=72.49 E-value=59 Score=27.56 Aligned_cols=105 Identities=13% Similarity=0.110 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHh-hchhHHHH----HHHHHHHHHHHHhhh-h----hhHHHHHHHHHHHHhhhhhhh
Q 018042 84 LTSFTSSLYVAGLVASFVASSVTRA-FGRKPSVL----MGGAAFLAGSALGGA-A----VNVYMLIFGRLLLGVGVGFAN 153 (361)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~l~d~-~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~~~~~r~l~G~~~~~~~ 153 (361)
......++..|..+|.+..|++... +-||+.+. .+++++.+..+..+. . .+...+++.-++.|++.=+..
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3555667777778888889988875 45665443 334444444444212 1 135567777778877643333
Q ss_pred hHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHH
Q 018042 154 QSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANF 189 (361)
Q Consensus 154 ~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~ 189 (361)
++... +..-++...+-+..-.++..+++|.+.-.+
T Consensus 223 ~ViL~-lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi 257 (267)
T PF07672_consen 223 GVILN-LPHEYKGYNPKKIGIQFGLIWGFGYIFYTI 257 (267)
T ss_pred HHHhc-ChhhhcCCCcceehhHHHHHHHHHHHHHHH
Confidence 32222 222233333334444566677777665433
No 292
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=72.45 E-value=1.3e+02 Score=31.79 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhhhhccccccccccccCChHHHHhhc
Q 018042 24 FVILSCMMAGMGGVIFGYDIGISGGVTSMEPFLEKFF 60 (361)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (361)
+-|...++.+++++..|....+++.. +...+..|.
T Consensus 661 pe~~~l~lG~i~a~i~G~~~P~fa~~--~s~~~~~f~ 695 (1228)
T KOG0055|consen 661 PEWPYLLLGSLGAAIRGATYPLFAYV--FSQVLEAFY 695 (1228)
T ss_pred chhHHHHHHHHHHHHhhhhHHHHHHH--HHHHHHHHh
Confidence 35666777777788888887776654 334445554
No 293
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=72.09 E-value=87 Score=29.33 Aligned_cols=72 Identities=11% Similarity=0.246 Sum_probs=46.0
Q ss_pred HHHHHhhhhhhhhHHHHHHHhcCCcc-cccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHH
Q 018042 142 RLLLGVGVGFANQSVPLYLSEMAPAR-YRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASI 216 (361)
Q Consensus 142 r~l~G~~~~~~~~~~~~~~~e~~~~~-~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~ 216 (361)
-++.|+.....+..--..+.|.+|.+ +|...++-++...++..++..+++ .......||+....+.-++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~---~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLS---GNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhHHHHHHHHHHHHHH
Confidence 44566666666666777788888754 577778877777666665554443 3333446898877665554444
No 294
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=70.26 E-value=37 Score=31.79 Aligned_cols=47 Identities=9% Similarity=0.104 Sum_probs=37.7
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHH
Q 018042 138 LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGA 184 (361)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~ 184 (361)
+++.-++..+..-..+....++-+.+.+|..=|+.|.+.+...++|.
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 33446777777777888888999999999999999999888777763
No 295
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=66.58 E-value=44 Score=25.55 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHh
Q 018042 88 TSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALG 129 (361)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~ 129 (361)
+.-|.+++.+...+.|++.+|..+++..........++.+..
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 345678888999999999999887643333333334444433
No 296
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=65.85 E-value=31 Score=24.91 Aligned_cols=45 Identities=13% Similarity=0.166 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHH
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGS 126 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~ 126 (361)
...+.......++..++..+.+.+.|..|.+..+.+...+..+..
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 445666677778888888888888888887776665554444443
No 297
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=63.45 E-value=95 Score=26.80 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=37.6
Q ss_pred HHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcc
Q 018042 138 LIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQ 196 (361)
Q Consensus 138 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~ 196 (361)
.-..|.+.|+-. ..+.+.+++++-.||++++--..--...+.+++.++.+++|..+..
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNY 79 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445688888754 4567788889999997665433333445555556666677665553
No 298
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=62.63 E-value=23 Score=33.96 Aligned_cols=65 Identities=14% Similarity=0.202 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhhcccC
Q 018042 134 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGTEQIK 198 (361)
Q Consensus 134 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 198 (361)
|+++++==-++.|++.........-+.-+-+|++.|+.+.+++....++|..+...+........
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34555556789999999999999999999999999999999999999999999888866555443
No 299
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=59.97 E-value=12 Score=30.65 Aligned_cols=102 Identities=14% Similarity=0.055 Sum_probs=62.9
Q ss_pred cccccccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHhh
Q 018042 70 DTKISNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIFGRLLLGVG 148 (361)
Q Consensus 70 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~ 148 (361)
..-+.|.||+++.+.--..+.|.+|..+|.++.+.++.-+ ..+. -++. ..-.-.|+|
T Consensus 127 laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~-------------------a~~~~fhP~---ALAMasGvG 184 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL-------------------ASLGIFHPY---ALAMASGVG 184 (241)
T ss_pred eeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHH-------------------HhccCCCHH---HHHHHcCCc
Confidence 3455667777777666666677777777776666554311 1111 1222 223456888
Q ss_pred hhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHhhh
Q 018042 149 VGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINYGT 194 (361)
Q Consensus 149 ~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (361)
.|..+..+..-+.+.+| +......++..++..+....|..+..++
T Consensus 185 SgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 185 SGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999997 4555566666666666666665554433
No 300
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=57.27 E-value=78 Score=25.79 Aligned_cols=28 Identities=21% Similarity=0.439 Sum_probs=14.6
Q ss_pred HHHHhhHHHHHh--hchhHHHHHHHHHHHHH
Q 018042 97 VASFVASSVTRA--FGRKPSVLMGGAAFLAG 125 (361)
Q Consensus 97 ~~~~~~g~l~d~--~Grr~~l~~~~~~~~~~ 125 (361)
.|..+...+.++ .|++. ++-|.++..++
T Consensus 173 ~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 173 LGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred HHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 333343344544 35555 66666666655
No 301
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=57.27 E-value=78 Score=25.22 Aligned_cols=24 Identities=8% Similarity=0.317 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhHHHHHhhchh
Q 018042 89 SSLYVAGLVASFVASSVTRAFGRK 112 (361)
Q Consensus 89 ~~~~~~~~~~~~~~g~l~d~~Grr 112 (361)
.-|.+++.+...+.|++.||.-+|
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcc
Confidence 456788899999999999998753
No 302
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=55.14 E-value=1.1e+02 Score=24.74 Aligned_cols=18 Identities=11% Similarity=0.159 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHhhHHH
Q 018042 88 TSSLYVAGLVASFVASSV 105 (361)
Q Consensus 88 ~~~~~~~~~~~~~~~g~l 105 (361)
.....+++.+|..+.+.+
T Consensus 52 ~~~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344445566677777766
No 303
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=51.26 E-value=1.2e+02 Score=25.69 Aligned_cols=24 Identities=4% Similarity=-0.157 Sum_probs=12.8
Q ss_pred chHHHHHhhHHHHHHHHHhccccc
Q 018042 202 GWRVSLALAAVPASILTLGALFLP 225 (361)
Q Consensus 202 ~wr~~~~~~~~~~~~~~~~~~~~~ 225 (361)
...+.-++..++.++......+++
T Consensus 113 ~~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 113 SSPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred chhHHHHHHHHHHHHHHHheeeec
Confidence 344455555555555555555553
No 304
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=50.46 E-value=18 Score=30.56 Aligned_cols=50 Identities=18% Similarity=0.087 Sum_probs=36.6
Q ss_pred HcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhH-------HHHhhhccceee
Q 018042 307 FYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWV-------KWMNRVRWRKLD 356 (361)
Q Consensus 307 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~-------~l~dr~grr~~~ 356 (361)
.|+-.++++.|.++...+.+.....+...+..++.|.+ ...||+|||+..
T Consensus 38 TYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 38 TYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 34455667889999888888888888888877777542 127999998653
No 305
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=49.54 E-value=87 Score=30.77 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHHh
Q 018042 134 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFINY 192 (361)
Q Consensus 134 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~ 192 (361)
+.++.+---++.+++.........-+..+-.|++.|....+++.+..++|.++...+..
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~ 622 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAE 622 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556678888888888888888888899999999999999999999988877754
No 306
>PRK10263 DNA translocase FtsK; Provisional
Probab=42.79 E-value=2.3e+02 Score=30.27 Aligned_cols=20 Identities=20% Similarity=0.453 Sum_probs=10.2
Q ss_pred HHHHHHHHHhhHHHHHhhch
Q 018042 92 YVAGLVASFVASSVTRAFGR 111 (361)
Q Consensus 92 ~~~~~~~~~~~g~l~d~~Gr 111 (361)
+.+..+|..+...+..-+|-
T Consensus 62 Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccchHHHHHHHHHHHHHhH
Confidence 44455555555555555553
No 307
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=40.96 E-value=1.2e+02 Score=24.37 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=19.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHh---------hHHHHHhhchhHH
Q 018042 80 DSQLLTSFTSSLYVAGLVASFV---------ASSVTRAFGRKPS 114 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~---------~g~l~d~~Grr~~ 114 (361)
+..+.......+.+...+-+.+ .+...|||||+-+
T Consensus 124 s~~~l~v~l~vF~ilv~v~c~la~~l~~~p~i~~~leryg~~l~ 167 (191)
T PF03596_consen 124 SLAELIVILIVFLILVGVWCFLAYKLARIPIIAEFLERYGRWLV 167 (191)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHhcccHH
Confidence 5555555555555555444443 3556677887643
No 308
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=38.62 E-value=79 Score=22.48 Aligned_cols=51 Identities=18% Similarity=0.034 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA 132 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 132 (361)
+..|-.-++|.-.+.+.++++++..|+.-+.+.=.+|..++.++..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 446777888888889999999999999877777778888777777665544
No 309
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=37.26 E-value=3.1e+02 Score=24.71 Aligned_cols=83 Identities=17% Similarity=-0.012 Sum_probs=54.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHH-------HHHhh--hhhhHHHHHHHHHHHHhhhh
Q 018042 80 DSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAG-------SALGG--AAVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~-------~~~~~--~~~~~~~~~~~r~l~G~~~~ 150 (361)
+.-+.+.+.+.+.....+|+..+-++.|.--.-+.+..-.++..++ .+.++ ..++-+.+++..++.|.-.|
T Consensus 41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG 120 (508)
T COG4262 41 GILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVG 120 (508)
T ss_pred ceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHh
Confidence 4566788889999999999988888777543333332222222221 11111 13567788888999999899
Q ss_pred hhhhHHHHHHHh
Q 018042 151 FANQSVPLYLSE 162 (361)
Q Consensus 151 ~~~~~~~~~~~e 162 (361)
...|....++..
T Consensus 121 ~EiPL~mrml~~ 132 (508)
T COG4262 121 AEIPLLMRMLQR 132 (508)
T ss_pred cchHHHHHHHHH
Confidence 988888887765
No 310
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=36.24 E-value=2.1e+02 Score=25.84 Aligned_cols=74 Identities=16% Similarity=0.114 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhH-HHHHHHHHHHHHHHHHhhhcccCCCcchHHHH
Q 018042 132 AVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNG-FQFSIGIGALAANFINYGTEQIKGGWGWRVSL 207 (361)
Q Consensus 132 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~ 207 (361)
++|+.....--.+..+..=...+....++.|.+-.++--.-.|. .+...+.+.+.-|.+-+.-.. ...+|+...
T Consensus 231 gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~L~~Yv~v~~G~~~G~lia~~~l~~p~~~Y~~~f--~~~~~~~~i 305 (374)
T PF01528_consen 231 GNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVVLARYVKVQFGPHLGTLIACGILGLPAIRYENRF--VAANLHTGI 305 (374)
T ss_pred hcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHh--ccccHHHHH
Confidence 45554443334444444444555666667776654442222222 222333344444444333222 223666554
No 311
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=35.18 E-value=3.5e+02 Score=24.68 Aligned_cols=49 Identities=12% Similarity=0.001 Sum_probs=27.0
Q ss_pred HHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHH
Q 018042 143 LLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFIN 191 (361)
Q Consensus 143 ~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~ 191 (361)
++.|+..|.........+.+...-+.---+.++-..+..+|.+..++.+
T Consensus 278 ~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 326 (399)
T PF00909_consen 278 LLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFA 326 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHC
T ss_pred HHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHh
Confidence 3445544444444444455555555545566666677777777666663
No 312
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.80 E-value=31 Score=30.20 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=14.8
Q ss_pred cCCcccccchhhHHHHHHHHHHHHHHHHHhhh
Q 018042 163 MAPARYRGAINNGFQFSIGIGALAANFINYGT 194 (361)
Q Consensus 163 ~~~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (361)
++|...| .++++.+.+.|.+++.++...+
T Consensus 209 LWP~~mR---~gvyY~sig~~gfl~~IlvLaI 237 (372)
T KOG2927|consen 209 LWPRRMR---QGVYYLSIGAGGFLAFILVLAI 237 (372)
T ss_pred cCcHHHh---cceeeeecchhHHHHHHHHHHH
Confidence 4565555 3444444455556655554333
No 313
>PRK02237 hypothetical protein; Provisional
Probab=34.06 E-value=1.3e+02 Score=21.44 Aligned_cols=51 Identities=16% Similarity=-0.007 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA 132 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~ 132 (361)
+..|-.-.+|.-.+.+.++++++..|+.-.-+.=.+|..++.++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 346778888888899999999999999877666677777777777655444
No 314
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=33.86 E-value=1.1e+02 Score=18.50 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhHHHHHh-hchhHHHHHHHHHHH
Q 018042 89 SSLYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFL 123 (361)
Q Consensus 89 ~~~~~~~~~~~~~~g~l~d~-~Grr~~l~~~~~~~~ 123 (361)
....++..+.+...|+..|+ +|.++...+..++.+
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 33445566667777888887 477555544443333
No 315
>COG4769 Predicted membrane protein [Function unknown]
Probab=33.52 E-value=1.4e+02 Score=23.27 Aligned_cols=46 Identities=24% Similarity=0.229 Sum_probs=27.4
Q ss_pred HHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 018042 97 VASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVG 148 (361)
Q Consensus 97 ~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 148 (361)
+.+...=++..++|+|..-.+|.. ..-++.+|..++++.+++.+-.
T Consensus 88 i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 88 ILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcc
Confidence 333444466677777766433332 2234567888888888777654
No 316
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=32.90 E-value=31 Score=28.98 Aligned_cols=54 Identities=26% Similarity=0.135 Sum_probs=37.2
Q ss_pred hhhHHcHHHHHHhcCCCC--hhhHHHhhhhhhcccccccchhhHHHHhhhccceeecc
Q 018042 303 NVIAFYAPLLFRTIGLGR--LKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIY 358 (361)
Q Consensus 303 ~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~ 358 (361)
.......+.+..+.+.+. ...+.......++..++.+..|. +.||.|||+.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--l~d~~g~~~~~~~ 74 (338)
T COG0477 19 GLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGP--LGDRYGRRKVLII 74 (338)
T ss_pred chHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhh--ccccccchHHHHH
Confidence 344455566666555554 36677777777888888788888 6999999865543
No 317
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=32.90 E-value=92 Score=21.76 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhhHHHHHhhchh
Q 018042 89 SSLYVAGLVASFVASSVTRAFGRK 112 (361)
Q Consensus 89 ~~~~~~~~~~~~~~g~l~d~~Grr 112 (361)
-.......+.+.+.|.+.||..||
T Consensus 82 ~~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 82 WITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 344566777888999999999876
No 318
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=31.84 E-value=15 Score=34.90 Aligned_cols=63 Identities=11% Similarity=-0.050 Sum_probs=0.0
Q ss_pred HHHHhcchhhhHHcHHHHHHhcCCCChhhHHHhhhhhhcccccccchhhHHHHhhhccceeeccc
Q 018042 295 FFQQVTGINVIAFYAPLLFRTIGLGRLKVCQLSKWIECGGSIGFGRNMWVKWMNRVRWRKLDIYT 359 (361)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~~~l~dr~grr~~~~~~ 359 (361)
.+.+......+...++.+-++++++..+++.+.+...++.++..++..+ +.+|..|-+++-.|
T Consensus 12 ~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy--~g~~~hrprwig~g 74 (539)
T PF03137_consen 12 GLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSY--FGGRGHRPRWIGIG 74 (539)
T ss_dssp -----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH--HhhhcCCcceeeec
Confidence 3334444444555566666778999999999999999999998888887 47776555555444
No 319
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=31.41 E-value=1.6e+02 Score=20.14 Aligned_cols=41 Identities=22% Similarity=0.453 Sum_probs=25.3
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCC
Q 018042 125 GSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAP 165 (361)
Q Consensus 125 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~ 165 (361)
+-++.+--+--+=++++|.+.|-+.+...........|.-|
T Consensus 21 gk~L~s~Epit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 21 GKVLASNEPITLRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred HHHHccCCCCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 33333333445667888999888877766655555555444
No 320
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=31.17 E-value=1.6e+02 Score=19.41 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=35.4
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCcc
Q 018042 104 SVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPAR 167 (361)
Q Consensus 104 ~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~ 167 (361)
+--|+-.|++-+.+.+.+-..+.++..+....+.+-..- . +.+...|-....+++--+++
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~la~~~--~--~~av~LPwvAVviAN~~~~~ 68 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGWLAWAI--I--VGAVPLPWVAVVIANARPPR 68 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH--H--HHhcccchhheeeccCCCCC
Confidence 345777888999998888888777777766542221111 1 12344555555555544443
No 321
>COG1971 Predicted membrane protein [Function unknown]
Probab=29.11 E-value=3e+02 Score=22.06 Aligned_cols=36 Identities=11% Similarity=0.254 Sum_probs=22.2
Q ss_pred HHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHH
Q 018042 93 VAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSAL 128 (361)
Q Consensus 93 ~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~ 128 (361)
+...+|..+..++...+|.|--++.|.++..++.-.
T Consensus 148 il~~~G~~IG~~~g~~~g~~ae~lgGiiLI~~G~~i 183 (190)
T COG1971 148 ILSALGAIIGRKLGKFLGKYAEILGGIILIGIGVKI 183 (190)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 333455555556666667777777777776666543
No 322
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=28.06 E-value=3.4e+02 Score=24.95 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=48.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhH---
Q 018042 79 FDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVGFANQS--- 155 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~--- 155 (361)
.++++...+.+...+...+++++-+...++.-|-+.............+......++.....+-++.|+........
T Consensus 34 l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~ 113 (415)
T TIGR00801 34 LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKK 113 (415)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788888999999999999999887766541122222222122111211222223333333344444443332221
Q ss_pred -HHHHHHhcCCcccccc
Q 018042 156 -VPLYLSEMAPARYRGA 171 (361)
Q Consensus 156 -~~~~~~e~~~~~~R~~ 171 (361)
....+.+.+|+.-.+.
T Consensus 114 ~~~~~i~~~~Pp~v~g~ 130 (415)
T TIGR00801 114 LGPRWLMKLFPPVVTGP 130 (415)
T ss_pred hhHHHHHhcCCchhHHH
Confidence 2234577777766554
No 323
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=28.00 E-value=4.8e+02 Score=23.96 Aligned_cols=48 Identities=10% Similarity=-0.047 Sum_probs=25.5
Q ss_pred HHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHHH
Q 018042 144 LLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFIN 191 (361)
Q Consensus 144 l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~~ 191 (361)
+.|+..|........++.+...-+.---+.++-..+..+|.+..++.+
T Consensus 284 viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 284 IIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 444444444444444455555444444456666666666766666553
No 324
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=27.92 E-value=1.9e+02 Score=19.20 Aligned_cols=20 Identities=20% Similarity=0.514 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhhHHHHHhh
Q 018042 90 SLYVAGLVASFVASSVTRAF 109 (361)
Q Consensus 90 ~~~~~~~~~~~~~g~l~d~~ 109 (361)
.......+.+++.|++.+.+
T Consensus 15 ~il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 15 YILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33334444444555555543
No 325
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=27.33 E-value=2.1e+02 Score=19.54 Aligned_cols=42 Identities=17% Similarity=0.037 Sum_probs=29.0
Q ss_pred HHHHHHHhhHHHHHhhch-------hHHHHHHHHHHHHHHHHhhhhhhH
Q 018042 94 AGLVASFVASSVTRAFGR-------KPSVLMGGAAFLAGSALGGAAVNV 135 (361)
Q Consensus 94 ~~~~~~~~~g~l~d~~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 135 (361)
+.....+..+++.+|.-+ ++.+..+.++...+.++++...|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 444556677777777654 677777777777777777765553
No 326
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=27.10 E-value=3.3e+02 Score=21.83 Aligned_cols=28 Identities=11% Similarity=-0.204 Sum_probs=22.0
Q ss_pred CCCChhhHHHhhhhhhcccccccchhhH
Q 018042 317 GLGRLKVCQLSKWIECGGSIGFGRNMWV 344 (361)
Q Consensus 317 g~s~~~~~~~~~~~~~~~~~g~~~~~~~ 344 (361)
.-|..+...+...+.++.++..+..+..
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~ 173 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLL 173 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3467777888888999988888888773
No 327
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=26.64 E-value=1.6e+02 Score=18.18 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHHHHHhcccccCC
Q 018042 180 IGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASILTLGALFLPET 227 (361)
Q Consensus 180 ~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~~~~~~~~~~es 227 (361)
..+|.+++.+.+..... .++++....+..+.+++.......+|++
T Consensus 11 ~il~~vvgyI~ssL~~~---~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGV---TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34566666666554443 3467777777777776666655555543
No 328
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=25.74 E-value=2.2e+02 Score=27.16 Aligned_cols=42 Identities=14% Similarity=0.296 Sum_probs=23.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHH
Q 018042 165 PARYRGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVS 206 (361)
Q Consensus 165 ~~~~R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~ 206 (361)
.++.||..+......+.+++.+++.+++.+....+...|+..
T Consensus 291 ~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~ 332 (521)
T PF02990_consen 291 SPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWKKN 332 (521)
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCceeeh
Confidence 345566666665555555555555555555544444456543
No 329
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=25.70 E-value=97 Score=16.10 Aligned_cols=9 Identities=44% Similarity=0.921 Sum_probs=2.9
Q ss_pred cccccCChh
Q 018042 221 ALFLPETPN 229 (361)
Q Consensus 221 ~~~~~es~~ 229 (361)
..+++|+|+
T Consensus 20 AI~FRePPr 28 (29)
T PF01405_consen 20 AIFFREPPR 28 (29)
T ss_dssp HHHSS----
T ss_pred hhhccCCCC
Confidence 355777774
No 330
>PRK10692 hypothetical protein; Provisional
Probab=25.53 E-value=2.2e+02 Score=19.34 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=8.7
Q ss_pred hhHHHHHHHHHHHHHHH
Q 018042 111 RKPSVLMGGAAFLAGSA 127 (361)
Q Consensus 111 rr~~l~~~~~~~~~~~~ 127 (361)
||...++|.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 45555555555555443
No 331
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=25.24 E-value=3.2e+02 Score=24.93 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=51.6
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHhhhhhhhh
Q 018042 76 YCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGA-AVNVYMLIFGRLLLGVGVGFANQ 154 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~ 154 (361)
..|++.++.....+...+...+++++-.+-.-++|.|..+..+.....+....... ...+.....+-++.|+-.-...
T Consensus 22 a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~illg- 100 (406)
T TIGR03173 22 ALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILLA- 100 (406)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-
Confidence 34778888888888888888888887753333567676555544333333222221 2233334444555555433222
Q ss_pred HHHHHHHhcCCcccc
Q 018042 155 SVPLYLSEMAPARYR 169 (361)
Q Consensus 155 ~~~~~~~e~~~~~~R 169 (361)
.....+.+.+|+.-.
T Consensus 101 ~~~~~l~~~iPp~v~ 115 (406)
T TIGR03173 101 PFFSKLVRFFPPVVT 115 (406)
T ss_pred HHHHHHHHHCCcHHH
Confidence 344556777776443
No 332
>PRK03818 putative transporter; Validated
Probab=25.21 E-value=6.2e+02 Score=24.39 Aligned_cols=81 Identities=7% Similarity=-0.109 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA-VNVYMLIFGRLLLGVGVGFANQSVPLYL 160 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 160 (361)
.+.|+..-++.+|...|.-+..-+.+..|.+..+ .+.++..+..++.... ....-+-..+.+-.++.+...++...++
T Consensus 435 ~~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a 513 (552)
T PRK03818 435 RELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFA 513 (552)
T ss_pred HHHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHH
Confidence 3456666666666666666666555556666554 4444444433333222 2222222334444455666677777888
Q ss_pred Hhc
Q 018042 161 SEM 163 (361)
Q Consensus 161 ~e~ 163 (361)
.|.
T Consensus 514 ~~~ 516 (552)
T PRK03818 514 NNL 516 (552)
T ss_pred hcc
Confidence 885
No 333
>PRK04201 zinc transporter ZupT; Provisional
Probab=24.80 E-value=4.3e+02 Score=22.43 Aligned_cols=13 Identities=15% Similarity=0.066 Sum_probs=7.4
Q ss_pred HHHhhchhHHHHH
Q 018042 105 VTRAFGRKPSVLM 117 (361)
Q Consensus 105 l~d~~Grr~~l~~ 117 (361)
...+..||+.+..
T Consensus 174 ~~~~~s~~~~~~~ 186 (265)
T PRK04201 174 YYATGSKKKAFLY 186 (265)
T ss_pred HHccCcHHHHHHH
Confidence 3445566666655
No 334
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=24.58 E-value=1.1e+02 Score=21.82 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=19.6
Q ss_pred CCcchHHHHHhhHHHHHHHHH-hcccccCCh
Q 018042 199 GGWGWRVSLALAAVPASILTL-GALFLPETP 228 (361)
Q Consensus 199 ~~~~wr~~~~~~~~~~~~~~~-~~~~~~es~ 228 (361)
+..+|..++++...++++.+. .+.+.||+.
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 345899998876655555444 446678874
No 335
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=24.37 E-value=3.7e+02 Score=24.76 Aligned_cols=48 Identities=13% Similarity=-0.042 Sum_probs=38.1
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHH
Q 018042 139 IFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALA 186 (361)
Q Consensus 139 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~ 186 (361)
+....+.+...-..+....+..+.+.++..-|+.|++.+.-.++|.--
T Consensus 373 i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~w 420 (510)
T KOG3574|consen 373 ITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNW 420 (510)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCc
Confidence 334666666677778888899999999999999999998888777543
No 336
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=24.27 E-value=2e+02 Score=18.29 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHhcCCccccc
Q 018042 134 NVYMLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRG 170 (361)
Q Consensus 134 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~ 170 (361)
++..+.......+++.+... ....+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l-~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITL-FLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccCC
Confidence 34444444444444444433 4556788888764443
No 337
>KOG3312 consensus Predicted membrane protein [Function unknown]
Probab=23.57 E-value=2.2e+02 Score=21.60 Aligned_cols=8 Identities=13% Similarity=0.048 Sum_probs=3.1
Q ss_pred cccccCCh
Q 018042 221 ALFLPETP 228 (361)
Q Consensus 221 ~~~~~es~ 228 (361)
|.++-.+.
T Consensus 27 WvlvYRt~ 34 (186)
T KOG3312|consen 27 WVLVYRTD 34 (186)
T ss_pred EEEEEehh
Confidence 33344443
No 338
>COG1288 Predicted membrane protein [Function unknown]
Probab=23.56 E-value=3.3e+02 Score=25.23 Aligned_cols=23 Identities=22% Similarity=0.215 Sum_probs=15.5
Q ss_pred CCcchHHHHHhhHHHHHHHHHhc
Q 018042 199 GGWGWRVSLALAAVPASILTLGA 221 (361)
Q Consensus 199 ~~~~wr~~~~~~~~~~~~~~~~~ 221 (361)
+..+||...++......+..+.+
T Consensus 214 sG~~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 214 SGMGLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred ccchHHHHHHHHHHHHHHHHHHH
Confidence 44689999888776655554443
No 339
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=23.51 E-value=1.3e+02 Score=15.87 Aligned_cols=9 Identities=22% Similarity=0.563 Sum_probs=5.9
Q ss_pred cccccCChh
Q 018042 221 ALFLPETPN 229 (361)
Q Consensus 221 ~~~~~es~~ 229 (361)
..+++|+|+
T Consensus 20 AIfFRepPr 28 (31)
T PRK11875 20 AIAFRDPPK 28 (31)
T ss_pred hhhccCCCC
Confidence 355788775
No 340
>COG4208 CysW ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]
Probab=23.02 E-value=1.7e+02 Score=24.48 Aligned_cols=39 Identities=3% Similarity=0.009 Sum_probs=20.1
Q ss_pred hhhHHHHHHHhcCCcccccchhhHHHHHHHHHHHHHHHH
Q 018042 152 ANQSVPLYLSEMAPARYRGAINNGFQFSIGIGALAANFI 190 (361)
Q Consensus 152 ~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~~g~~~~~~~ 190 (361)
.+..+.++.-.-+.-+-|....++.-.-++++.+++.++
T Consensus 83 vFGv~aAW~iakf~F~Gk~lL~tlIDlPFsVSPVvaGl~ 121 (287)
T COG4208 83 VFGVAAAWAIARFEFPGKALLLTLIDLPFSVSPVVAGLV 121 (287)
T ss_pred HHHHHHHHHHHHccCCchhhhhhhhcCCCcccHHHHHHH
Confidence 344444444433333334455666666666666665554
No 341
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=22.84 E-value=2.8e+02 Score=19.57 Aligned_cols=33 Identities=3% Similarity=-0.225 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhHHHHHh-hchhHHHHHHHHHHH
Q 018042 91 LYVAGLVASFVASSVTRA-FGRKPSVLMGGAAFL 123 (361)
Q Consensus 91 ~~~~~~~~~~~~g~l~d~-~Grr~~l~~~~~~~~ 123 (361)
..+...+.+.+.|...|+ +|-++.+.+..++.+
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 334445566667777776 576655544444333
No 342
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=22.78 E-value=6.6e+02 Score=23.80 Aligned_cols=72 Identities=18% Similarity=0.316 Sum_probs=39.9
Q ss_pred HHHHHhhhhhhhhHHHHHHHhcCCccc-ccchhhHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHhhHHHHHH
Q 018042 142 RLLLGVGVGFANQSVPLYLSEMAPARY-RGAINNGFQFSIGIGALAANFINYGTEQIKGGWGWRVSLALAAVPASI 216 (361)
Q Consensus 142 r~l~G~~~~~~~~~~~~~~~e~~~~~~-R~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~wr~~~~~~~~~~~~ 216 (361)
-+..|++.......--..+.+.+|.++ +...+|-++...++-.++...++. ......||+....+.-++.++
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~---~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSS---NIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhHHHHHHHhHHHHHH
Confidence 344555555555566666778777543 455556555555444444334432 333456899887665444333
No 343
>COG5547 Small integral membrane protein [Function unknown]
Probab=22.27 E-value=2.1e+02 Score=17.74 Aligned_cols=39 Identities=23% Similarity=0.234 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Q 018042 112 KPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 150 (361)
|+.++.+.+...+++++.++.-=-..+++.-.+.|++.|
T Consensus 8 kypIIgglvglliAili~t~GfwKtilviil~~lGv~iG 46 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIG 46 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555554442222223333444555443
No 344
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=22.05 E-value=88 Score=30.99 Aligned_cols=51 Identities=14% Similarity=0.159 Sum_probs=35.0
Q ss_pred cccccCCchhHHHHHHHHHHH-HHHHHHhhHHHHHhh--chhHHHHHHHHHHHH
Q 018042 74 SNYCKFDSQLLTSFTSSLYVA-GLVASFVASSVTRAF--GRKPSVLMGGAAFLA 124 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~--Grr~~l~~~~~~~~~ 124 (361)
+++|+.+++.+..+.....+. .++|.+++|++..|+ ..|.+..+.++...+
T Consensus 420 E~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 420 ETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 455688999999888655554 478999999999987 445444444433333
No 345
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=21.95 E-value=6.6e+02 Score=23.48 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=63.0
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHhhhh
Q 018042 74 SNYCKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAA---VNVYMLIFGRLLLGVGVG 150 (361)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~ 150 (361)
..+.|+++++...+.+.-.+...++.++--....+.|-|-....+.....++.+..... ......+.+-+..|+..-
T Consensus 41 g~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~ 120 (451)
T COG2233 41 GLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYF 120 (451)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH
Confidence 55678899999999999999999999888764444555544444444444444443333 235555555666666544
Q ss_pred hhhhHHHHHHHhcCCcccccchh
Q 018042 151 FANQSVPLYLSEMAPARYRGAIN 173 (361)
Q Consensus 151 ~~~~~~~~~~~e~~~~~~R~~~~ 173 (361)
...+.....+...+||---|...
T Consensus 121 li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 121 LISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred HHHHHHHHHHHHhCCCceEEeEe
Confidence 43333332778888886555443
No 346
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=21.70 E-value=4.3e+02 Score=21.30 Aligned_cols=27 Identities=7% Similarity=-0.095 Sum_probs=17.2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhc
Q 018042 169 RGAINNGFQFSIGIGALAANFINYGTE 195 (361)
Q Consensus 169 R~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (361)
-+++..+...+..+|.++|..+...+.
T Consensus 139 ~~rA~~~~~~~L~~G~~lGs~l~~~l~ 165 (194)
T PF11833_consen 139 LGRAFLWTLGGLVVGLILGSLLASWLP 165 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 356666666666777777777755444
No 347
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=21.69 E-value=3.1e+02 Score=24.47 Aligned_cols=102 Identities=14% Similarity=0.061 Sum_probs=56.0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHhhHHHHHhhch---hHH----HHHHHHHHHHHHHHhhhh-------------hhHH
Q 018042 77 CKFDSQLLTSFTSSLYVAGLVASFVASSVTRAFGR---KPS----VLMGGAAFLAGSALGGAA-------------VNVY 136 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~Gr---r~~----l~~~~~~~~~~~~~~~~~-------------~~~~ 136 (361)
++++.+....+. .+..++..++..++..++.| ++. +.+|+++..++.+..+.. .+.+
T Consensus 249 ~~ip~~~l~~~n---~i~iii~~pi~~~~~~p~~~~~~~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~~~~~~ 325 (372)
T PF00854_consen 249 FGIPPAWLQSFN---PIFIIIFIPILDRVVYPLLRRGIQPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCGKVSPW 325 (372)
T ss_dssp ----SGGGTTHH---HHHCHHHHHHHHHHCCCTTTT------HHHHHHH-HHHHHHHHTTTHHHH---HH----TT--TH
T ss_pred cccccchhhhHH---HHHHHHHHHHHHHHHhHHhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccCCCChh
Confidence 455555544433 34444445555554444433 222 244444444444443321 1223
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHhcCCcccccchhhHHHHHHH
Q 018042 137 MLIFGRLLLGVGVGFANQSVPLYLSEMAPARYRGAINNGFQFSIG 181 (361)
Q Consensus 137 ~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~R~~~~~~~~~~~~ 181 (361)
..+-..++..+++=...+.......|.+|++..+..++++.....
T Consensus 326 ~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~~ 370 (372)
T PF00854_consen 326 WQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALSA 370 (372)
T ss_dssp HHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHhc
Confidence 444778888888888888888899999999999888888776543
No 348
>CHL00031 psbT photosystem II protein T
Probab=21.20 E-value=1.5e+02 Score=15.95 Aligned_cols=9 Identities=44% Similarity=0.940 Sum_probs=6.1
Q ss_pred cccccCChh
Q 018042 221 ALFLPETPN 229 (361)
Q Consensus 221 ~~~~~es~~ 229 (361)
..+++|+|+
T Consensus 20 AI~FRePPr 28 (33)
T CHL00031 20 AIFFREPPK 28 (33)
T ss_pred hheecCCCC
Confidence 356788875
No 349
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=20.99 E-value=3.5e+02 Score=22.43 Aligned_cols=57 Identities=12% Similarity=0.227 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018042 90 SLYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSALGGAAVNVYMLIFGRLLLG 146 (361)
Q Consensus 90 ~~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 146 (361)
...+|..+|..+..++.||+...-.-..|.+...++.-...-.++...++++-.+-+
T Consensus 10 aIl~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvlG~ 66 (226)
T PF04474_consen 10 AILLGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQNPLLVILSLVLGT 66 (226)
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCccHHHHHHHHHHH
Confidence 345677778888888888887777777777777776665555556555555444433
No 350
>PRK03612 spermidine synthase; Provisional
Probab=20.76 E-value=7.4e+02 Score=23.64 Aligned_cols=31 Identities=10% Similarity=0.198 Sum_probs=14.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHhhchh
Q 018042 82 QLLTSFTSSLYVAGLVASFVASSVTRAFGRK 112 (361)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~Grr 112 (361)
..++.......+|+.++.-+.....+++.+.
T Consensus 54 ~ii~~fl~glalGs~l~~~~~~~~~~~~~~~ 84 (521)
T PRK03612 54 TVIGLMLFAMGVGALLSKYLLRDAAAGFVAV 84 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 3444555555555555444444444444433
No 351
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=20.55 E-value=1e+02 Score=29.31 Aligned_cols=27 Identities=7% Similarity=0.021 Sum_probs=14.7
Q ss_pred hhhhcccCchhHHHHHHHHHHHHHhcch
Q 018042 275 FKKIIQRKYRPQLLMAMAIPFFQQVTGI 302 (361)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
-.++||.+. .+.++..++..+.|....
T Consensus 251 hgDVFR~P~-~~~lls~lvG~G~Qll~~ 277 (521)
T PF02990_consen 251 HGDVFRPPK-HPMLLSALVGTGIQLLFM 277 (521)
T ss_pred hHHHhcCcC-CchHHHhHhcchhhhhHH
Confidence 345666554 345555666666665443
No 352
>COG2119 Predicted membrane protein [Function unknown]
Probab=20.41 E-value=4.1e+02 Score=21.25 Aligned_cols=37 Identities=11% Similarity=0.195 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhHHHHHhhchhHHHHHHHHHHHHHHH
Q 018042 91 LYVAGLVASFVASSVTRAFGRKPSVLMGGAAFLAGSA 127 (361)
Q Consensus 91 ~~~~~~~~~~~~g~l~d~~Grr~~l~~~~~~~~~~~~ 127 (361)
..+...++.+.+.++++|+..|.+-.++.+++.+..+
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 3455667777788889999888887777666555443
No 353
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.40 E-value=3.4e+02 Score=19.50 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=22.5
Q ss_pred ccccchhhHHH-HHHHHHHHHHHHHHhhhcccCCCcchHHH
Q 018042 167 RYRGAINNGFQ-FSIGIGALAANFINYGTEQIKGGWGWRVS 206 (361)
Q Consensus 167 ~~R~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~wr~~ 206 (361)
+.++...++-. .=..-|.++|..+++++-.+.+...|-.+
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 44555555532 23334566677777766666665566543
No 354
>PRK10720 uracil transporter; Provisional
Probab=20.19 E-value=7e+02 Score=23.09 Aligned_cols=7 Identities=14% Similarity=0.164 Sum_probs=3.5
Q ss_pred ccccCCh
Q 018042 222 LFLPETP 228 (361)
Q Consensus 222 ~~~~es~ 228 (361)
+++|...
T Consensus 403 lll~~~~ 409 (428)
T PRK10720 403 LIFKLIS 409 (428)
T ss_pred HHhcccc
Confidence 5555543
Done!