Query 018045
Match_columns 361
No_of_seqs 452 out of 2992
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:03:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018045.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018045hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2goy_A Adenosine phosphosulfat 100.0 2.1E-56 7.1E-61 403.8 16.6 216 1-221 46-263 (275)
2 2oq2_A Phosphoadenosine phosph 100.0 2.2E-53 7.6E-58 381.1 16.0 206 1-219 34-250 (261)
3 2o8v_A Phosphoadenosine phosph 100.0 5.4E-52 1.8E-56 370.4 17.2 205 1-221 37-246 (252)
4 3fwk_A FMN adenylyltransferase 100.0 1.4E-44 4.7E-49 323.2 12.0 165 1-194 47-237 (308)
5 1zun_A Sulfate adenylyltransfe 100.0 1.9E-41 6.4E-46 311.4 14.3 194 1-204 39-307 (325)
6 2wsi_A FAD synthetase; transfe 100.0 2.2E-39 7.5E-44 295.8 10.9 180 2-208 43-251 (306)
7 1sur_A PAPS reductase; assimil 100.0 5.1E-38 1.8E-42 274.2 14.3 175 1-188 36-215 (215)
8 3zzx_A Thioredoxin; oxidoreduc 99.9 4E-22 1.4E-26 153.2 12.6 103 251-361 2-105 (105)
9 3h79_A Thioredoxin-like protei 99.9 2.5E-21 8.4E-26 154.1 15.2 109 247-360 13-126 (127)
10 2av4_A Thioredoxin-like protei 99.8 5.7E-21 2E-25 154.0 12.0 105 251-360 23-137 (160)
11 2qsi_A Putative hydrogenase ex 99.8 2.6E-21 8.8E-26 153.7 9.8 107 247-360 13-121 (137)
12 2qgv_A Hydrogenase-1 operon pr 99.8 2.3E-21 8E-26 154.5 7.1 103 250-360 18-123 (140)
13 3gnj_A Thioredoxin domain prot 99.8 6.1E-20 2.1E-24 142.0 13.3 105 249-360 4-108 (111)
14 2dj1_A Protein disulfide-isome 99.8 6.6E-20 2.2E-24 148.2 13.9 105 248-360 16-122 (140)
15 2dml_A Protein disulfide-isome 99.8 1.2E-19 4.1E-24 144.7 14.8 107 248-360 16-122 (130)
16 3ga4_A Dolichyl-diphosphooligo 99.8 9.6E-20 3.3E-24 151.8 13.6 109 247-359 16-150 (178)
17 3hxs_A Thioredoxin, TRXP; elec 99.8 9.1E-20 3.1E-24 147.6 13.0 109 247-360 20-137 (141)
18 3tco_A Thioredoxin (TRXA-1); d 99.8 1.1E-19 3.7E-24 140.0 12.7 105 248-360 3-107 (109)
19 2trx_A Thioredoxin; electron t 99.8 1.6E-19 5.6E-24 139.0 12.9 105 249-360 2-106 (108)
20 1r26_A Thioredoxin; redox-acti 99.8 2.4E-19 8.2E-24 142.3 13.2 111 240-360 10-121 (125)
21 2i4a_A Thioredoxin; acidophIle 99.8 3.2E-19 1.1E-23 136.9 13.4 106 249-361 2-107 (107)
22 3die_A Thioredoxin, TRX; elect 99.8 2.2E-19 7.6E-24 137.5 12.4 103 249-360 3-105 (106)
23 1nsw_A Thioredoxin, TRX; therm 99.8 2.1E-19 7E-24 137.6 11.9 102 251-360 2-103 (105)
24 1x5e_A Thioredoxin domain cont 99.8 3.2E-19 1.1E-23 141.5 13.3 102 249-360 7-108 (126)
25 1x5d_A Protein disulfide-isome 99.8 2.5E-19 8.6E-24 143.3 12.7 105 249-360 7-115 (133)
26 2voc_A Thioredoxin; electron t 99.8 2.3E-19 8E-24 139.3 11.5 102 250-360 2-103 (112)
27 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.9E-19 6.4E-24 145.8 11.4 106 248-360 5-110 (140)
28 3qfa_C Thioredoxin; protein-pr 99.8 1.8E-19 6.3E-24 140.9 11.0 104 249-360 12-115 (116)
29 2yzu_A Thioredoxin; redox prot 99.8 3.8E-19 1.3E-23 136.8 12.6 103 250-360 2-104 (109)
30 2ppt_A Thioredoxin-2; thiredox 99.8 3.5E-19 1.2E-23 146.8 12.9 104 249-360 47-150 (155)
31 3p2a_A Thioredoxin 2, putative 99.8 5.8E-19 2E-23 144.1 14.0 105 248-360 37-141 (148)
32 1w4v_A Thioredoxin, mitochondr 99.8 3.8E-19 1.3E-23 139.7 12.4 107 247-360 11-117 (119)
33 3uvt_A Thioredoxin domain-cont 99.8 4.3E-19 1.5E-23 137.1 12.5 104 249-360 5-110 (111)
34 3f3q_A Thioredoxin-1; His TAG, 99.8 4.6E-19 1.6E-23 137.0 12.5 101 250-360 8-108 (109)
35 2l5l_A Thioredoxin; structural 99.8 5.9E-19 2E-23 142.0 13.4 106 249-360 9-124 (136)
36 1t00_A Thioredoxin, TRX; redox 99.8 6.7E-19 2.3E-23 136.5 13.0 105 249-360 5-109 (112)
37 1dby_A Chloroplast thioredoxin 99.8 5.8E-19 2E-23 135.6 12.4 104 250-360 2-105 (107)
38 2o8v_B Thioredoxin 1; disulfid 99.8 3.4E-19 1.2E-23 142.0 11.4 106 248-360 21-126 (128)
39 3d6i_A Monothiol glutaredoxin- 99.8 7.1E-19 2.4E-23 136.4 12.3 105 251-360 2-107 (112)
40 1thx_A Thioredoxin, thioredoxi 99.8 1.1E-18 3.7E-23 135.8 13.4 105 249-360 7-111 (115)
41 4euy_A Uncharacterized protein 99.8 9.5E-20 3.2E-24 139.8 7.2 97 255-360 7-103 (105)
42 2pu9_C TRX-F, thioredoxin F-ty 99.8 9.3E-19 3.2E-23 135.5 12.7 105 248-360 4-109 (111)
43 1fb6_A Thioredoxin M; electron 99.8 1E-18 3.5E-23 133.5 12.8 103 251-360 2-104 (105)
44 3aps_A DNAJ homolog subfamily 99.8 4.8E-19 1.7E-23 139.5 10.9 106 249-360 3-111 (122)
45 1gh2_A Thioredoxin-like protei 99.8 1.4E-18 4.8E-23 133.6 13.2 102 251-360 3-105 (107)
46 2e0q_A Thioredoxin; electron t 99.8 1E-18 3.5E-23 133.0 11.9 101 251-360 1-101 (104)
47 1ep7_A Thioredoxin CH1, H-type 99.8 8.7E-19 3E-23 135.8 11.5 106 249-360 2-109 (112)
48 2dj3_A Protein disulfide-isome 99.8 2.1E-19 7.1E-24 143.9 8.0 109 248-360 6-116 (133)
49 3evi_A Phosducin-like protein 99.8 6.7E-19 2.3E-23 137.8 10.5 103 249-359 3-111 (118)
50 3idv_A Protein disulfide-isome 99.8 1.3E-18 4.3E-23 153.7 13.3 107 246-360 12-120 (241)
51 1mek_A Protein disulfide isome 99.8 4.1E-19 1.4E-23 139.1 9.0 106 249-360 7-115 (120)
52 1syr_A Thioredoxin; SGPP, stru 99.8 1.4E-18 4.8E-23 134.9 11.7 102 249-360 9-110 (112)
53 2i1u_A Thioredoxin, TRX, MPT46 99.8 1.5E-18 5E-23 136.4 11.8 105 249-360 12-116 (121)
54 3qou_A Protein YBBN; thioredox 99.8 1.5E-18 5.1E-23 157.5 12.7 107 248-360 6-112 (287)
55 1faa_A Thioredoxin F; electron 99.8 3.1E-18 1.1E-22 135.3 12.5 106 248-361 17-123 (124)
56 3gix_A Thioredoxin-like protei 99.8 1.7E-18 5.8E-23 141.7 11.1 103 254-360 9-119 (149)
57 2xc2_A Thioredoxinn; oxidoredu 99.8 3.3E-18 1.1E-22 133.7 12.4 102 250-360 14-116 (117)
58 1xwb_A Thioredoxin; dimerizati 99.8 3.5E-18 1.2E-22 130.8 12.2 103 251-360 2-105 (106)
59 3apq_A DNAJ homolog subfamily 99.8 4.3E-18 1.5E-22 147.4 14.1 105 248-360 96-200 (210)
60 3m9j_A Thioredoxin; oxidoreduc 99.8 4.6E-18 1.6E-22 130.0 12.3 101 252-360 3-104 (105)
61 2djj_A PDI, protein disulfide- 99.8 1.7E-18 5.9E-23 136.1 10.2 105 248-360 6-115 (121)
62 1oaz_A Thioredoxin 1; immune s 99.8 6.2E-19 2.1E-23 139.5 7.2 105 249-360 3-121 (123)
63 3ul3_B Thioredoxin, thioredoxi 99.8 1.4E-18 4.9E-23 138.2 9.4 87 268-359 41-127 (128)
64 3ed3_A Protein disulfide-isome 99.8 6.2E-18 2.1E-22 154.2 14.8 107 248-360 16-140 (298)
65 3us3_A Calsequestrin-1; calciu 99.8 4.3E-18 1.5E-22 159.9 14.1 108 245-360 9-122 (367)
66 1xfl_A Thioredoxin H1; AT3G510 99.8 5.5E-18 1.9E-22 134.2 12.6 105 249-360 16-122 (124)
67 2vim_A Thioredoxin, TRX; thior 99.8 7.5E-18 2.6E-22 128.5 12.8 102 251-360 1-103 (104)
68 2oe3_A Thioredoxin-3; electron 99.8 2.7E-18 9.2E-23 133.9 10.4 101 250-360 13-114 (114)
69 2b5e_A Protein disulfide-isome 99.8 8.6E-18 2.9E-22 164.5 16.0 107 248-360 13-120 (504)
70 2dj0_A Thioredoxin-related tra 99.8 3.2E-19 1.1E-23 143.8 4.6 104 249-357 7-116 (137)
71 1v98_A Thioredoxin; oxidoreduc 99.8 5.2E-18 1.8E-22 137.1 11.6 104 249-360 33-136 (140)
72 2r2j_A Thioredoxin domain-cont 99.8 3.2E-18 1.1E-22 161.8 11.9 106 249-360 5-115 (382)
73 2vlu_A Thioredoxin, thioredoxi 99.8 7.4E-18 2.5E-22 132.7 12.1 105 249-360 13-118 (122)
74 2l6c_A Thioredoxin; oxidoreduc 99.8 4E-18 1.4E-22 131.9 10.2 100 251-360 5-104 (110)
75 3dxb_A Thioredoxin N-terminall 99.7 5.5E-18 1.9E-22 148.0 12.0 105 249-360 12-116 (222)
76 2wz9_A Glutaredoxin-3; protein 99.7 8.2E-18 2.8E-22 138.2 12.1 104 249-360 12-116 (153)
77 1qgv_A Spliceosomal protein U5 99.7 9.1E-18 3.1E-22 136.1 11.9 101 255-360 10-119 (142)
78 2l57_A Uncharacterized protein 99.7 5.1E-18 1.7E-22 134.5 10.0 106 250-360 5-115 (126)
79 2j23_A Thioredoxin; immune pro 99.7 4.2E-18 1.4E-22 134.2 9.3 106 247-360 13-119 (121)
80 1zma_A Bacterocin transport ac 99.7 3E-18 1E-22 134.3 8.3 102 249-359 12-118 (118)
81 1sji_A Calsequestrin 2, calseq 99.7 6.3E-18 2.1E-22 157.9 11.9 104 248-360 10-120 (350)
82 3q6o_A Sulfhydryl oxidase 1; p 99.7 4E-17 1.4E-21 144.6 15.6 107 248-360 11-125 (244)
83 3emx_A Thioredoxin; structural 99.7 3.4E-18 1.2E-22 137.5 7.7 101 248-360 15-124 (135)
84 1ti3_A Thioredoxin H, PTTRXH1; 99.7 1.2E-17 4.1E-22 129.4 10.4 105 249-360 4-110 (113)
85 3d22_A TRXH4, thioredoxin H-ty 99.7 1.5E-17 5.1E-22 134.1 11.3 105 249-360 24-130 (139)
86 2es7_A Q8ZP25_salty, putative 99.7 3.1E-18 1.1E-22 138.7 7.0 102 250-360 18-123 (142)
87 2f51_A Thioredoxin; electron t 99.7 2.7E-17 9.1E-22 129.0 12.1 103 249-360 3-111 (118)
88 2dbc_A PDCL2, unnamed protein 99.7 1.2E-17 4E-22 134.3 10.1 104 249-360 10-119 (135)
89 2vm1_A Thioredoxin, thioredoxi 99.7 2.9E-17 9.8E-22 128.3 11.9 105 249-360 6-112 (118)
90 3cxg_A Putative thioredoxin; m 99.7 8.5E-18 2.9E-22 134.8 8.8 105 248-360 19-127 (133)
91 3f8u_A Protein disulfide-isome 99.7 2.5E-17 8.6E-22 160.3 12.4 106 250-360 2-107 (481)
92 3idv_A Protein disulfide-isome 99.7 4.6E-17 1.6E-21 143.6 12.8 103 250-360 131-235 (241)
93 2c0g_A ERP29 homolog, windbeut 99.7 2E-16 6.8E-21 139.3 14.5 102 248-360 15-130 (248)
94 3uem_A Protein disulfide-isome 99.7 1.5E-16 5E-21 149.2 14.3 108 246-360 246-355 (361)
95 3fk8_A Disulphide isomerase; A 99.7 1.7E-16 5.7E-21 126.9 10.6 100 257-360 16-131 (133)
96 3iv4_A Putative oxidoreductase 99.7 9.4E-17 3.2E-21 122.3 8.1 100 249-357 6-111 (112)
97 2qc7_A ERP31, ERP28, endoplasm 99.7 5E-16 1.7E-20 136.3 13.9 102 249-360 5-117 (240)
98 3t58_A Sulfhydryl oxidase 1; o 99.7 5.2E-16 1.8E-20 151.3 15.2 108 248-360 11-125 (519)
99 1a8l_A Protein disulfide oxido 99.7 2.8E-16 9.7E-21 137.2 11.9 103 251-360 118-224 (226)
100 2yj7_A LPBCA thioredoxin; oxid 99.5 4.1E-18 1.4E-22 130.2 0.0 104 250-360 2-105 (106)
101 1wou_A Thioredoxin -related pr 99.7 1.7E-16 5.7E-21 125.3 8.9 103 250-359 6-122 (123)
102 2kuc_A Putative disulphide-iso 99.7 2.4E-16 8.2E-21 125.4 9.7 105 251-360 8-119 (130)
103 2trc_P Phosducin, MEKA, PP33; 99.7 7.1E-17 2.4E-21 140.1 6.7 105 249-360 99-211 (217)
104 2fwh_A Thiol:disulfide interch 99.7 3.8E-16 1.3E-20 125.2 10.6 100 255-360 18-126 (134)
105 2djk_A PDI, protein disulfide- 99.7 3.8E-16 1.3E-20 125.1 10.4 102 250-360 7-113 (133)
106 3f8u_A Protein disulfide-isome 99.6 1.5E-15 5.1E-20 147.7 14.9 108 247-360 350-459 (481)
107 1a0r_P Phosducin, MEKA, PP33; 99.6 3.5E-16 1.2E-20 137.7 9.2 106 249-360 112-224 (245)
108 3apo_A DNAJ homolog subfamily 99.6 4.7E-16 1.6E-20 160.0 11.4 105 248-360 115-219 (780)
109 1wmj_A Thioredoxin H-type; str 99.6 5.5E-17 1.9E-21 129.0 2.2 105 249-360 14-120 (130)
110 1fo5_A Thioredoxin; disulfide 99.6 7.4E-16 2.5E-20 112.8 7.6 82 270-360 3-84 (85)
111 3f9u_A Putative exported cytoc 99.6 1.2E-15 4E-20 127.7 9.4 106 250-360 27-164 (172)
112 3qcp_A QSOX from trypanosoma b 99.6 1.7E-15 5.7E-20 144.3 11.3 95 248-345 22-124 (470)
113 1nho_A Probable thioredoxin; b 99.6 8.6E-16 2.9E-20 112.5 7.0 81 271-360 3-83 (85)
114 2b5e_A Protein disulfide-isome 99.6 4.9E-15 1.7E-19 145.0 14.3 106 248-360 357-465 (504)
115 2ywm_A Glutaredoxin-like prote 99.6 8.4E-15 2.9E-19 128.2 10.7 98 251-360 120-218 (229)
116 3dml_A Putative uncharacterize 99.6 2.9E-15 9.8E-20 115.7 5.8 90 268-360 17-108 (116)
117 2ju5_A Thioredoxin disulfide i 99.5 1.9E-14 6.5E-19 118.1 10.3 99 257-360 34-150 (154)
118 2lst_A Thioredoxin; structural 99.3 4.7E-16 1.6E-20 123.7 0.0 89 268-360 18-114 (130)
119 1wy5_A TILS, hypothetical UPF0 99.5 3.8E-14 1.3E-18 130.1 12.4 154 10-175 25-190 (317)
120 3ph9_A Anterior gradient prote 99.5 4.1E-15 1.4E-19 121.2 4.5 70 268-338 43-113 (151)
121 1sen_A Thioredoxin-like protei 99.5 5.9E-15 2E-19 122.5 5.1 97 257-360 37-146 (164)
122 1z6n_A Hypothetical protein PA 99.5 1.2E-14 4E-19 120.7 6.8 81 252-338 39-122 (167)
123 3apo_A DNAJ homolog subfamily 99.5 8.5E-14 2.9E-18 143.2 14.7 109 249-360 543-654 (780)
124 3raz_A Thioredoxin-related pro 99.5 9.8E-14 3.4E-18 113.1 11.6 91 268-360 23-138 (151)
125 1lu4_A Soluble secreted antige 99.5 9.4E-14 3.2E-18 110.7 11.3 86 268-360 23-134 (136)
126 2hls_A Protein disulfide oxido 99.5 8E-14 2.7E-18 123.2 11.8 97 254-360 125-224 (243)
127 2ywb_A GMP synthase [glutamine 99.5 2E-14 6.8E-19 139.9 8.6 172 6-183 205-383 (503)
128 3ira_A Conserved protein; meth 99.5 2.1E-14 7E-19 119.5 7.3 79 253-337 26-116 (173)
129 3kp8_A Vkorc1/thioredoxin doma 99.5 6.6E-15 2.3E-19 112.9 4.0 74 269-358 12-91 (106)
130 3or5_A Thiol:disulfide interch 99.5 1.6E-13 5.4E-18 113.3 12.1 90 268-360 33-149 (165)
131 2b5x_A YKUV protein, TRXY; thi 99.5 2E-13 6.9E-18 110.3 12.5 101 252-360 15-143 (148)
132 1ilo_A Conserved hypothetical 99.5 7E-14 2.4E-18 100.3 8.3 74 272-357 2-76 (77)
133 2dpl_A GMP synthetase, GMP syn 99.5 4.3E-14 1.5E-18 128.9 8.9 167 6-181 16-188 (308)
134 1a8l_A Protein disulfide oxido 99.5 8.2E-14 2.8E-18 121.5 9.3 99 257-360 10-111 (226)
135 1zzo_A RV1677; thioredoxin fol 99.5 2.2E-13 7.4E-18 108.4 10.8 86 268-360 24-133 (136)
136 2h30_A Thioredoxin, peptide me 99.5 9.9E-14 3.4E-18 114.5 8.8 104 250-360 22-154 (164)
137 2ywm_A Glutaredoxin-like prote 99.5 1.9E-13 6.6E-18 119.5 10.4 88 268-360 19-113 (229)
138 3erw_A Sporulation thiol-disul 99.5 2.2E-13 7.4E-18 109.7 9.7 87 268-358 33-145 (145)
139 2f9s_A Thiol-disulfide oxidore 99.5 4.3E-13 1.5E-17 109.2 11.4 90 268-360 25-136 (151)
140 2lja_A Putative thiol-disulfid 99.4 4.9E-13 1.7E-17 108.8 11.0 89 268-360 29-141 (152)
141 3hcz_A Possible thiol-disulfid 99.4 5.3E-13 1.8E-17 107.9 9.6 89 268-359 30-143 (148)
142 4evm_A Thioredoxin family prot 99.4 6.8E-13 2.3E-17 105.4 10.1 89 268-361 21-138 (138)
143 3k32_A Uncharacterized protein 99.4 7.2E-14 2.5E-18 119.9 4.5 144 10-173 7-156 (203)
144 3lor_A Thiol-disulfide isomera 99.4 9.1E-13 3.1E-17 108.2 11.0 90 268-360 29-153 (160)
145 3bl5_A Queuosine biosynthesis 99.4 3.1E-13 1.1E-17 117.4 8.4 176 10-191 4-200 (219)
146 3hdc_A Thioredoxin family prot 99.4 1.6E-12 5.4E-17 106.8 12.2 91 268-360 40-150 (158)
147 3eyt_A Uncharacterized protein 99.4 1E-12 3.5E-17 107.7 11.0 90 268-360 27-150 (158)
148 2fgx_A Putative thioredoxin; N 99.4 4.8E-13 1.6E-17 101.8 7.9 78 270-357 29-106 (107)
149 3gl3_A Putative thiol:disulfid 99.4 2.2E-12 7.4E-17 105.0 12.1 92 268-361 27-141 (152)
150 3eur_A Uncharacterized protein 99.4 1E-12 3.4E-17 105.9 10.0 86 268-359 30-142 (142)
151 3fkf_A Thiol-disulfide oxidore 99.4 1.2E-12 4.1E-17 105.8 10.4 87 268-360 32-144 (148)
152 2l5o_A Putative thioredoxin; s 99.4 1.4E-12 4.7E-17 106.3 10.7 89 268-360 27-139 (153)
153 2lrn_A Thiol:disulfide interch 99.4 1.6E-12 5.3E-17 106.1 10.7 87 268-360 28-139 (152)
154 3ewl_A Uncharacterized conserv 99.4 1.5E-12 5.2E-17 104.7 10.4 87 268-360 26-139 (142)
155 1ttz_A Conserved hypothetical 99.4 7.3E-13 2.5E-17 97.3 6.9 73 273-360 3-75 (87)
156 2lrt_A Uncharacterized protein 99.4 6E-12 2.1E-16 102.7 12.5 86 268-356 34-142 (152)
157 3lwa_A Secreted thiol-disulfid 99.4 4.1E-12 1.4E-16 106.9 11.7 89 268-360 58-179 (183)
158 1ni5_A Putative cell cycle pro 99.4 1.6E-12 5.4E-17 124.2 9.8 153 9-175 13-177 (433)
159 1kor_A Argininosuccinate synth 99.4 9.5E-13 3.2E-17 123.7 8.1 150 10-175 1-166 (400)
160 3a2k_A TRNA(Ile)-lysidine synt 99.4 3.2E-12 1.1E-16 123.2 11.9 157 10-176 19-189 (464)
161 3ia1_A THIO-disulfide isomeras 99.3 3.8E-12 1.3E-16 103.8 10.3 84 270-360 31-142 (154)
162 3ha9_A Uncharacterized thiored 99.3 4E-12 1.4E-16 105.0 10.2 87 268-361 36-163 (165)
163 1i5g_A Tryparedoxin II; electr 99.3 5.2E-12 1.8E-16 101.9 10.2 74 268-344 27-126 (144)
164 3kcm_A Thioredoxin family prot 99.3 3.8E-12 1.3E-16 103.7 9.4 93 268-361 27-142 (154)
165 3fw2_A Thiol-disulfide oxidore 99.3 1.5E-11 5.1E-16 99.9 12.5 87 268-360 32-146 (150)
166 3uem_A Protein disulfide-isome 99.3 8E-12 2.7E-16 116.8 12.2 106 249-360 117-228 (361)
167 1kng_A Thiol:disulfide interch 99.3 4.5E-12 1.6E-16 103.4 9.3 87 268-360 41-150 (156)
168 2hma_A Probable tRNA (5-methyl 99.3 1E-11 3.5E-16 116.1 12.8 161 9-173 9-193 (376)
169 2b1k_A Thiol:disulfide interch 99.3 4E-12 1.4E-16 105.3 8.8 85 268-360 50-158 (168)
170 4fo5_A Thioredoxin-like protei 99.3 5.1E-12 1.8E-16 101.8 8.9 87 268-360 31-143 (143)
171 2dlx_A UBX domain-containing p 99.3 1.8E-11 6.2E-16 99.7 11.5 99 257-360 29-134 (153)
172 1o8x_A Tryparedoxin, TRYX, TXN 99.3 1.2E-11 4.1E-16 100.0 10.1 69 268-337 27-121 (146)
173 1o73_A Tryparedoxin; electron 99.3 1.2E-11 4.2E-16 99.5 9.7 75 268-345 27-127 (144)
174 2pg3_A Queuosine biosynthesis 99.3 2.8E-11 9.6E-16 106.0 12.4 178 10-191 3-203 (232)
175 2ywi_A Hypothetical conserved 99.3 2.2E-11 7.5E-16 103.5 10.6 90 268-360 44-172 (196)
176 2hyx_A Protein DIPZ; thioredox 99.3 3E-11 1E-15 112.0 12.2 90 268-360 81-197 (352)
177 3s9f_A Tryparedoxin; thioredox 99.3 2.9E-11 1E-15 100.1 10.7 74 268-344 47-146 (165)
178 3kh7_A Thiol:disulfide interch 99.3 6.1E-11 2.1E-15 99.2 12.7 86 268-360 57-165 (176)
179 2der_A TRNA-specific 2-thiouri 99.2 1.6E-11 5.5E-16 114.8 8.0 159 10-173 18-201 (380)
180 1jfu_A Thiol:disulfide interch 99.2 8.3E-11 2.8E-15 99.1 10.9 92 268-360 59-178 (186)
181 2cvb_A Probable thiol-disulfid 99.2 4.9E-11 1.7E-15 100.7 9.2 87 268-360 32-157 (188)
182 2hls_A Protein disulfide oxido 99.2 5.6E-11 1.9E-15 104.8 9.7 93 257-359 15-114 (243)
183 3u5r_E Uncharacterized protein 99.2 7.4E-11 2.5E-15 102.3 10.1 89 268-360 57-185 (218)
184 2lus_A Thioredoxion; CR-Trp16, 98.8 2E-12 6.9E-17 104.0 0.0 75 268-345 24-126 (143)
185 2ls5_A Uncharacterized protein 98.8 2E-12 6.9E-17 106.2 0.0 88 268-360 32-146 (159)
186 3kp9_A Vkorc1/thioredoxin doma 99.2 8.3E-12 2.8E-16 112.0 2.6 71 272-358 200-276 (291)
187 3drn_A Peroxiredoxin, bacterio 99.2 1.8E-10 6.1E-15 94.8 10.4 91 268-360 27-147 (161)
188 3p52_A NH(3)-dependent NAD(+) 99.1 7.2E-11 2.5E-15 104.1 7.7 143 10-172 27-175 (249)
189 1wjk_A C330018D20RIK protein; 99.1 1E-10 3.6E-15 88.3 7.2 79 268-360 14-94 (100)
190 1xng_A NH(3)-dependent NAD(+) 99.1 1.6E-10 5.5E-15 103.4 9.2 144 10-173 26-175 (268)
191 1hyu_A AHPF, alkyl hydroperoxi 99.1 2.4E-10 8.3E-15 112.0 11.0 97 251-359 101-197 (521)
192 2rli_A SCO2 protein homolog, m 99.1 4.3E-10 1.5E-14 93.2 10.3 90 268-360 25-162 (171)
193 2ggt_A SCO1 protein homolog, m 99.1 3.6E-10 1.2E-14 92.9 9.5 90 268-360 22-159 (164)
194 2vup_A Glutathione peroxidase- 99.1 3.7E-10 1.3E-14 95.6 9.8 91 268-360 47-183 (190)
195 3tqi_A GMP synthase [glutamine 99.1 5.4E-11 1.8E-15 116.2 5.1 166 10-182 231-406 (527)
196 3dwv_A Glutathione peroxidase- 99.1 6.8E-10 2.3E-14 93.7 11.1 91 268-360 45-181 (187)
197 3fiu_A NH(3)-dependent NAD(+) 99.1 3.1E-10 1.1E-14 100.1 9.2 146 10-172 30-184 (249)
198 2k8s_A Thioredoxin; dimer, str 99.1 2.1E-11 7.2E-16 88.1 1.0 61 272-337 3-64 (80)
199 3cmi_A Peroxiredoxin HYR1; thi 99.1 2.7E-10 9.3E-15 94.6 7.7 90 268-360 31-166 (171)
200 2p5q_A Glutathione peroxidase 99.1 2.9E-10 9.9E-15 94.0 7.6 90 268-360 31-166 (170)
201 2e18_A NH(3)-dependent NAD(+) 99.1 2.8E-10 9.4E-15 101.2 7.8 144 10-174 23-173 (257)
202 2bmx_A Alkyl hydroperoxidase C 99.0 4.7E-10 1.6E-14 95.4 8.1 92 268-360 44-168 (195)
203 2v1m_A Glutathione peroxidase; 99.0 9.8E-10 3.3E-14 90.7 9.7 91 268-360 30-165 (169)
204 2p31_A CL683, glutathione pero 99.0 2.3E-10 7.7E-15 96.2 5.8 90 268-360 48-179 (181)
205 1zof_A Alkyl hydroperoxide-red 99.0 3.1E-10 1E-14 96.7 6.4 92 268-360 32-159 (198)
206 2obi_A PHGPX, GPX-4, phospholi 99.0 6.5E-10 2.2E-14 93.4 8.4 90 268-360 46-182 (183)
207 1xvw_A Hypothetical protein RV 99.0 7.3E-10 2.5E-14 90.8 8.4 91 268-361 34-159 (160)
208 1we0_A Alkyl hydroperoxide red 99.0 4E-10 1.4E-14 95.1 7.0 91 268-360 30-155 (187)
209 1ego_A Glutaredoxin; electron 99.0 9E-10 3.1E-14 80.1 7.8 74 273-359 3-81 (85)
210 2k6v_A Putative cytochrome C o 99.0 3.2E-10 1.1E-14 93.9 5.8 90 268-360 34-171 (172)
211 2c5s_A THII, probable thiamine 99.0 7.5E-10 2.6E-14 104.9 8.9 145 10-172 188-344 (413)
212 2e7p_A Glutaredoxin; thioredox 99.0 2E-10 7E-15 88.9 3.6 81 269-360 19-106 (116)
213 2f8a_A Glutathione peroxidase 99.0 2E-09 6.8E-14 92.5 10.0 44 268-311 46-89 (208)
214 1qmv_A Human thioredoxin perox 98.9 2E-09 6.9E-14 91.6 8.6 92 268-360 33-161 (197)
215 3kij_A Probable glutathione pe 98.9 3.7E-09 1.3E-13 88.5 9.1 45 268-312 37-81 (180)
216 2gs3_A PHGPX, GPX-4, phospholi 98.9 3.5E-09 1.2E-13 89.1 8.7 91 268-360 48-184 (185)
217 1gpm_A GMP synthetase, XMP ami 98.9 1.4E-09 4.8E-14 106.2 7.0 165 10-181 228-403 (525)
218 4f9z_D Endoplasmic reticulum r 98.9 2.3E-08 7.7E-13 87.1 14.0 106 249-360 113-223 (227)
219 1k92_A Argininosuccinate synth 98.9 1.2E-09 4.2E-14 103.3 5.9 160 10-186 11-195 (455)
220 1uul_A Tryparedoxin peroxidase 98.9 4.1E-09 1.4E-13 90.0 8.5 92 268-360 35-163 (202)
221 2h01_A 2-Cys peroxiredoxin; th 98.9 2.9E-09 9.9E-14 90.2 7.3 92 268-360 30-157 (192)
222 1zye_A Thioredoxin-dependent p 98.9 4.6E-09 1.6E-13 91.0 8.6 92 268-360 55-183 (220)
223 2i81_A 2-Cys peroxiredoxin; st 98.9 6.4E-09 2.2E-13 89.7 8.6 92 268-360 51-178 (213)
224 2jsy_A Probable thiol peroxida 98.8 2.4E-08 8.3E-13 82.3 11.6 90 268-360 43-165 (167)
225 3ztl_A Thioredoxin peroxidase; 98.8 1E-08 3.5E-13 89.0 8.8 92 268-360 68-196 (222)
226 3gkn_A Bacterioferritin comigr 98.8 2.3E-08 7.7E-13 82.1 10.5 92 268-360 34-160 (163)
227 2nz2_A Argininosuccinate synth 98.8 4.1E-09 1.4E-13 99.3 6.3 148 10-174 6-173 (413)
228 1xzo_A BSSCO, hypothetical pro 98.8 2.4E-08 8.2E-13 82.7 9.3 92 268-360 32-170 (174)
229 2i3y_A Epididymal secretory gl 98.8 1.1E-07 3.7E-12 82.0 13.1 43 268-311 55-97 (215)
230 3gyk_A 27KDA outer membrane pr 98.8 2.6E-08 9.1E-13 82.8 9.0 82 268-360 21-171 (175)
231 2b7k_A SCO1 protein; metalloch 98.7 4.8E-08 1.6E-12 83.2 10.1 45 268-312 40-88 (200)
232 1eej_A Thiol:disulfide interch 98.7 1.8E-08 6E-13 87.1 7.2 81 268-360 85-209 (216)
233 1xvq_A Thiol peroxidase; thior 98.7 2.4E-08 8.1E-13 83.2 7.5 66 268-337 43-140 (175)
234 1t3b_A Thiol:disulfide interch 98.7 3.6E-08 1.2E-12 84.8 8.3 82 268-361 85-210 (211)
235 2a4v_A Peroxiredoxin DOT5; yea 98.7 7.7E-08 2.6E-12 78.6 8.7 66 269-337 35-128 (159)
236 2l4c_A Endoplasmic reticulum r 98.7 2.6E-07 8.8E-12 72.2 11.2 96 250-359 22-121 (124)
237 1h75_A Glutaredoxin-like prote 98.6 3.6E-08 1.2E-12 70.8 5.7 71 273-359 3-75 (81)
238 1r7h_A NRDH-redoxin; thioredox 98.6 6.9E-08 2.4E-12 68.1 6.9 69 273-358 3-74 (75)
239 1vl2_A Argininosuccinate synth 98.6 7.2E-08 2.5E-12 90.2 8.9 151 8-174 13-182 (421)
240 3hd5_A Thiol:disulfide interch 98.6 1.4E-07 4.8E-12 79.9 9.5 43 268-311 24-66 (195)
241 2c0d_A Thioredoxin peroxidase 98.6 8.2E-08 2.8E-12 83.1 8.2 92 268-360 55-182 (221)
242 3ixr_A Bacterioferritin comigr 98.6 1E-07 3.4E-12 79.7 8.4 92 268-360 50-176 (179)
243 3uow_A GMP synthetase; structu 98.6 4.2E-08 1.5E-12 96.2 7.0 166 10-181 256-434 (556)
244 3a2v_A Probable peroxiredoxin; 98.6 8.6E-08 2.9E-12 84.3 7.5 92 268-360 32-160 (249)
245 2r37_A Glutathione peroxidase 98.6 3.6E-07 1.2E-11 78.2 10.6 43 268-311 37-79 (207)
246 4g2e_A Peroxiredoxin; redox pr 98.6 5.1E-08 1.8E-12 79.7 5.0 92 268-360 29-156 (157)
247 1n8j_A AHPC, alkyl hydroperoxi 98.6 2.1E-07 7.1E-12 78.3 8.8 92 268-360 29-154 (186)
248 2pn8_A Peroxiredoxin-4; thiore 98.5 2.4E-07 8.1E-12 79.6 8.8 92 268-360 47-175 (211)
249 3h93_A Thiol:disulfide interch 98.5 2.3E-07 7.8E-12 78.3 7.7 42 268-310 24-65 (192)
250 1v58_A Thiol:disulfide interch 98.5 2.4E-07 8.1E-12 81.3 7.9 85 268-360 96-231 (241)
251 4f9z_D Endoplasmic reticulum r 98.5 3.1E-07 1.1E-11 79.8 8.6 97 249-359 9-109 (227)
252 3me7_A Putative uncharacterize 98.5 6.5E-07 2.2E-11 74.0 9.4 92 268-360 27-160 (170)
253 2vxo_A GMP synthase [glutamine 98.5 2.4E-07 8.2E-12 92.9 7.8 164 10-179 241-440 (697)
254 4gqc_A Thiol peroxidase, perox 98.4 8.2E-08 2.8E-12 79.1 3.5 92 268-360 32-158 (164)
255 1psq_A Probable thiol peroxida 98.4 1.1E-06 3.7E-11 72.1 10.1 90 268-360 41-163 (163)
256 3qpm_A Peroxiredoxin; oxidored 98.4 6.9E-07 2.4E-11 78.3 9.1 92 268-360 76-204 (240)
257 1nm3_A Protein HI0572; hybrid, 98.4 1.2E-06 4.1E-11 76.7 9.3 90 268-359 32-164 (241)
258 3uma_A Hypothetical peroxiredo 98.4 9.8E-07 3.3E-11 74.0 8.0 92 268-360 55-184 (184)
259 2wfc_A Peroxiredoxin 5, PRDX5; 98.3 1.3E-06 4.6E-11 72.0 8.2 70 268-338 30-135 (167)
260 1kte_A Thioltransferase; redox 98.3 8.5E-07 2.9E-11 66.9 6.2 59 272-337 13-77 (105)
261 2hze_A Glutaredoxin-1; thiored 98.3 4.5E-07 1.5E-11 69.8 4.6 58 270-337 18-84 (114)
262 4hde_A SCO1/SENC family lipopr 98.3 9.2E-06 3.1E-10 67.0 12.7 44 268-311 31-77 (170)
263 3mng_A Peroxiredoxin-5, mitoch 98.3 1.9E-06 6.5E-11 71.5 8.2 92 268-360 42-173 (173)
264 1q98_A Thiol peroxidase, TPX; 98.3 1E-06 3.5E-11 72.4 6.5 68 268-338 42-141 (165)
265 1sji_A Calsequestrin 2, calseq 98.3 9.7E-06 3.3E-10 75.0 13.7 109 249-360 226-344 (350)
266 1kqp_A NAD+ synthase, NH(3)-de 98.3 1.5E-06 5E-11 77.5 7.3 143 10-172 39-199 (271)
267 1prx_A HORF6; peroxiredoxin, h 98.3 6.4E-06 2.2E-10 71.3 11.1 89 271-360 34-167 (224)
268 3p7x_A Probable thiol peroxida 98.3 2.7E-06 9.3E-11 69.8 8.3 89 268-360 45-166 (166)
269 3tjj_A Peroxiredoxin-4; thiore 98.3 1.3E-06 4.5E-11 77.1 6.7 92 268-360 90-218 (254)
270 3n05_A NH(3)-dependent NAD(+) 98.2 1.3E-06 4.5E-11 86.6 7.0 142 10-170 327-473 (590)
271 2yzh_A Probable thiol peroxida 98.2 3.8E-06 1.3E-10 69.3 8.7 91 268-360 46-170 (171)
272 3zrd_A Thiol peroxidase; oxido 98.2 1.5E-06 5.3E-11 73.8 6.4 67 268-337 77-175 (200)
273 2ec4_A FAS-associated factor 1 98.2 1.4E-05 4.7E-10 66.4 11.9 105 254-359 35-165 (178)
274 3q4g_A NH(3)-dependent NAD(+) 98.2 4.4E-06 1.5E-10 74.4 8.3 151 5-172 35-211 (279)
275 3bj5_A Protein disulfide-isome 98.2 2.3E-05 8E-10 63.0 11.9 106 249-360 14-125 (147)
276 2v2g_A Peroxiredoxin 6; oxidor 98.1 7.3E-06 2.5E-10 71.3 9.1 91 269-360 29-163 (233)
277 1un2_A DSBA, thiol-disulfide i 98.1 9.2E-07 3.2E-11 75.0 2.9 45 268-313 112-159 (197)
278 2znm_A Thiol:disulfide interch 98.1 6.1E-06 2.1E-10 69.5 7.9 42 268-310 21-62 (195)
279 2lqo_A Putative glutaredoxin R 98.1 4.8E-06 1.6E-10 61.2 6.3 74 272-360 5-82 (92)
280 1wxi_A NH(3)-dependent NAD(+) 98.1 6.2E-06 2.1E-10 73.5 8.2 143 10-172 41-202 (275)
281 3qmx_A Glutaredoxin A, glutare 98.1 6.1E-06 2.1E-10 61.6 6.7 60 268-337 13-76 (99)
282 2cq9_A GLRX2 protein, glutared 98.1 4.2E-06 1.4E-10 65.9 6.0 66 257-337 18-89 (130)
283 2yan_A Glutaredoxin-3; oxidore 98.1 6.4E-06 2.2E-10 62.2 6.6 65 257-337 8-81 (105)
284 3us3_A Calsequestrin-1; calciu 98.1 2.1E-05 7.2E-10 73.3 11.5 110 249-360 228-346 (367)
285 3ic4_A Glutaredoxin (GRX-1); s 98.1 6.8E-06 2.3E-10 60.3 6.5 71 272-358 13-91 (92)
286 3c1r_A Glutaredoxin-1; oxidize 98.1 2.7E-06 9.2E-11 65.8 4.5 69 257-337 16-91 (118)
287 1xcc_A 1-Cys peroxiredoxin; un 98.1 6.1E-06 2.1E-10 71.2 6.9 89 271-360 34-164 (220)
288 2klx_A Glutaredoxin; thioredox 98.1 3E-06 1E-10 61.8 4.3 55 272-337 7-64 (89)
289 2ht9_A Glutaredoxin-2; thiored 98.1 4.9E-06 1.7E-10 66.9 5.9 66 257-337 40-111 (146)
290 2pwj_A Mitochondrial peroxired 98.1 4E-06 1.4E-10 69.4 5.5 44 269-312 44-89 (171)
291 3dpi_A NAD+ synthetase; ssgcid 98.0 5E-06 1.7E-10 74.0 5.8 152 5-172 41-211 (285)
292 3nzn_A Glutaredoxin; structura 98.0 1.9E-05 6.6E-10 59.3 8.1 76 269-358 20-102 (103)
293 2h8l_A Protein disulfide-isome 98.0 3.2E-05 1.1E-09 68.1 10.8 97 249-359 6-110 (252)
294 3rjz_A N-type ATP pyrophosphat 98.0 5.5E-06 1.9E-10 71.7 5.5 126 11-171 6-140 (237)
295 3gv1_A Disulfide interchange p 98.0 1.1E-05 3.7E-10 64.9 6.3 80 268-360 13-137 (147)
296 1z6m_A Conserved hypothetical 98.0 3.1E-05 1E-09 64.0 9.3 42 268-310 26-69 (175)
297 1vbk_A Hypothetical protein PH 98.0 1.2E-05 4.1E-10 72.8 7.2 118 10-171 180-307 (307)
298 2rem_A Disulfide oxidoreductas 97.9 6.5E-05 2.2E-09 63.0 10.9 42 268-310 24-65 (193)
299 1tp9_A Peroxiredoxin, PRX D (t 97.9 1.6E-05 5.6E-10 64.9 7.0 69 268-337 34-138 (162)
300 3ec3_A Protein disulfide-isome 97.9 4.4E-05 1.5E-09 67.1 10.2 98 249-359 6-112 (250)
301 1fov_A Glutaredoxin 3, GRX3; a 97.9 2.2E-05 7.4E-10 56.0 6.1 69 273-359 3-74 (82)
302 2r2j_A Thioredoxin domain-cont 97.9 5.2E-05 1.8E-09 71.0 10.2 104 249-360 219-327 (382)
303 2khp_A Glutaredoxin; thioredox 97.9 1.9E-05 6.5E-10 57.8 5.7 55 272-337 7-65 (92)
304 3rhb_A ATGRXC5, glutaredoxin-C 97.9 1.4E-05 4.9E-10 61.1 5.2 55 273-337 21-82 (113)
305 4dvc_A Thiol:disulfide interch 97.9 5.9E-05 2E-09 62.6 9.2 41 268-309 20-60 (184)
306 3msz_A Glutaredoxin 1; alpha-b 97.8 7.1E-05 2.4E-09 54.1 7.9 74 271-360 4-85 (89)
307 3sbc_A Peroxiredoxin TSA1; alp 97.7 0.00019 6.6E-09 61.2 10.5 93 268-361 51-180 (216)
308 1wik_A Thioredoxin-like protei 97.6 0.00012 4.1E-09 55.5 6.7 65 257-337 6-79 (109)
309 3ctg_A Glutaredoxin-2; reduced 97.6 5.5E-05 1.9E-09 59.3 4.6 69 257-337 28-103 (129)
310 4f82_A Thioredoxin reductase; 97.6 0.00018 6E-09 59.4 7.7 99 258-360 40-174 (176)
311 3h8q_A Thioredoxin reductase 3 97.6 8E-05 2.7E-09 57.0 5.3 66 257-337 8-79 (114)
312 3hz8_A Thiol:disulfide interch 97.5 9E-05 3.1E-09 62.4 5.6 43 268-311 23-65 (193)
313 2h8l_A Protein disulfide-isome 97.5 0.00065 2.2E-08 59.5 11.0 103 249-360 114-228 (252)
314 3keb_A Probable thiol peroxida 97.5 0.00033 1.1E-08 60.1 8.6 87 268-360 47-174 (224)
315 3l9s_A Thiol:disulfide interch 97.5 0.00021 7.2E-09 60.0 6.9 42 268-310 20-64 (191)
316 3sdb_A Glutamine-dependent NAD 97.4 0.0002 7E-09 71.8 7.1 64 5-68 356-428 (680)
317 3ilv_A Glutamine-dependent NAD 97.4 0.00031 1.1E-08 70.0 8.3 151 6-172 299-505 (634)
318 3tue_A Tryparedoxin peroxidase 97.4 0.0013 4.4E-08 56.2 10.5 105 248-361 43-184 (219)
319 3ec3_A Protein disulfide-isome 97.3 0.0028 9.6E-08 55.4 12.6 103 249-360 116-226 (250)
320 3l9v_A Putative thiol-disulfid 97.3 0.00011 3.8E-09 61.6 3.2 43 269-312 14-59 (189)
321 3l4n_A Monothiol glutaredoxin- 97.0 0.0011 3.9E-08 51.5 6.0 69 257-337 5-79 (127)
322 3ed3_A Protein disulfide-isome 96.9 0.006 2.1E-07 54.8 10.6 101 249-358 143-263 (298)
323 3feu_A Putative lipoprotein; a 96.9 0.0007 2.4E-08 56.4 4.0 39 269-310 22-60 (185)
324 3gha_A Disulfide bond formatio 96.9 0.0066 2.3E-07 51.2 10.0 43 268-310 28-72 (202)
325 4eo3_A Bacterioferritin comigr 96.8 0.0027 9.2E-08 57.8 7.8 88 268-360 23-137 (322)
326 2wci_A Glutaredoxin-4; redox-a 96.7 0.0015 5.3E-08 51.3 4.6 67 257-337 26-99 (135)
327 1nm3_A Protein HI0572; hybrid, 96.6 0.0051 1.8E-07 53.3 7.4 58 270-337 169-228 (241)
328 3f4s_A Alpha-DSBA1, putative u 96.5 0.02 6.7E-07 49.2 10.8 42 268-309 38-81 (226)
329 3q6o_A Sulfhydryl oxidase 1; p 96.5 0.021 7.3E-07 49.3 11.2 97 252-360 141-238 (244)
330 1aba_A Glutaredoxin; electron 96.5 0.0046 1.6E-07 44.3 5.8 56 273-337 2-74 (87)
331 1jgt_A Beta-lactam synthetase; 96.4 0.0031 1.1E-07 61.1 5.7 107 10-123 242-354 (513)
332 3ipz_A Monothiol glutaredoxin- 96.4 0.0046 1.6E-07 46.6 5.5 49 279-337 31-82 (109)
333 1ct9_A Asparagine synthetase B 96.4 0.01 3.6E-07 58.0 9.2 107 10-123 227-354 (553)
334 1t1v_A SH3BGRL3, SH3 domain-bi 96.3 0.0066 2.3E-07 44.1 5.7 54 273-337 4-69 (93)
335 2ct6_A SH3 domain-binding glut 96.3 0.008 2.7E-07 45.4 6.4 56 271-337 8-81 (111)
336 3zyw_A Glutaredoxin-3; metal b 96.3 0.0054 1.8E-07 46.4 5.2 55 273-337 18-80 (111)
337 2axo_A Hypothetical protein AT 96.2 0.042 1.4E-06 48.2 11.2 80 269-359 42-140 (270)
338 1q15_A CARA; CMPR, (2S,5S)-5-c 96.0 0.0023 7.7E-08 62.0 2.0 107 10-123 239-351 (503)
339 3gx8_A Monothiol glutaredoxin- 95.9 0.015 5.1E-07 44.6 6.2 49 279-337 29-83 (121)
340 2wem_A Glutaredoxin-related pr 95.7 0.016 5.4E-07 44.3 5.5 64 259-337 13-85 (118)
341 4f4h_A Glutamine dependent NAD 95.6 0.027 9.4E-07 55.1 7.9 58 10-67 301-361 (565)
342 3t58_A Sulfhydryl oxidase 1; o 95.5 0.051 1.7E-06 52.7 9.3 97 251-359 140-237 (519)
343 3c7m_A Thiol:disulfide interch 95.0 0.045 1.5E-06 45.3 6.4 41 269-310 17-58 (195)
344 1xiy_A Peroxiredoxin, pfaop; a 94.9 0.053 1.8E-06 44.8 6.4 92 268-360 42-180 (182)
345 1u6t_A SH3 domain-binding glut 94.2 0.1 3.4E-06 39.9 6.0 58 272-331 1-69 (121)
346 3kzq_A Putative uncharacterize 93.8 0.6 2.1E-05 38.9 10.9 33 272-305 4-36 (208)
347 2wul_A Glutaredoxin related pr 92.0 0.21 7.1E-06 38.0 4.8 66 257-337 11-85 (118)
348 2kok_A Arsenate reductase; bru 91.6 0.49 1.7E-05 35.9 6.7 34 273-313 7-40 (120)
349 2jad_A Yellow fluorescent prot 90.6 0.12 4E-06 47.3 2.5 60 273-337 263-327 (362)
350 1t4y_A Adaptive-response senso 90.4 4 0.00014 29.8 10.3 82 272-358 13-95 (105)
351 3gn3_A Putative protein-disulf 90.3 0.45 1.6E-05 39.0 5.7 41 268-309 13-54 (182)
352 2xhf_A Peroxiredoxin 5; oxidor 90.2 0.21 7.1E-06 40.7 3.6 45 268-312 41-87 (171)
353 3bci_A Disulfide bond protein 90.1 0.65 2.2E-05 37.9 6.6 42 268-309 10-53 (186)
354 2in3_A Hypothetical protein; D 88.5 0.54 1.8E-05 39.3 5.1 43 315-360 166-208 (216)
355 3gmf_A Protein-disulfide isome 87.9 1.1 3.9E-05 37.3 6.7 43 268-310 14-58 (205)
356 3tdg_A DSBG, putative uncharac 87.6 0.45 1.5E-05 41.7 4.0 30 268-297 146-175 (273)
357 2x8g_A Thioredoxin glutathione 86.6 0.56 1.9E-05 46.1 4.6 66 257-337 9-80 (598)
358 2g2q_A Glutaredoxin-2; thiored 85.0 1.6 5.3E-05 32.6 5.1 36 270-310 2-37 (124)
359 1z3e_A Regulatory protein SPX; 84.1 1.2 4.2E-05 34.2 4.6 34 273-313 3-36 (132)
360 3l78_A Regulatory protein SPX; 80.8 2 6.7E-05 32.5 4.5 34 273-313 2-35 (120)
361 3fz4_A Putative arsenate reduc 77.0 3.7 0.00013 30.9 5.0 35 272-313 4-38 (120)
362 3bci_A Disulfide bond protein 76.8 2.4 8.1E-05 34.4 4.2 38 315-360 139-176 (186)
363 1rw1_A Conserved hypothetical 76.6 2 7E-05 32.0 3.4 34 273-313 2-35 (114)
364 3feu_A Putative lipoprotein; a 75.3 2.9 9.9E-05 34.1 4.3 41 315-360 142-182 (185)
365 3ktb_A Arsenical resistance op 70.6 11 0.00038 27.6 5.9 63 288-357 26-101 (106)
366 3gkx_A Putative ARSC family re 69.0 3.9 0.00013 30.8 3.4 34 273-313 6-39 (120)
367 3c7m_A Thiol:disulfide interch 68.1 1.5 5.2E-05 35.6 1.0 41 315-360 152-192 (195)
368 3gn3_A Putative protein-disulf 66.8 5.1 0.00017 32.6 3.9 37 315-357 144-181 (182)
369 3hz8_A Thiol:disulfide interch 66.6 8.6 0.0003 31.3 5.4 38 315-360 144-181 (193)
370 3kgk_A Arsenical resistance op 61.8 11 0.00038 27.8 4.4 64 288-358 23-99 (110)
371 1wwj_A Circadian clock protein 61.4 2.5 8.7E-05 30.9 0.9 61 270-332 7-67 (105)
372 3gl5_A Putative DSBA oxidoredu 60.7 11 0.00036 32.1 5.0 39 315-360 173-211 (239)
373 3gmf_A Protein-disulfide isome 59.9 5.9 0.0002 32.9 3.1 34 320-360 162-195 (205)
374 1hyu_A AHPF, alkyl hydroperoxi 58.8 23 0.0008 33.8 7.6 76 268-358 17-92 (521)
375 2in3_A Hypothetical protein; D 58.5 20 0.0007 29.3 6.4 39 270-309 7-45 (216)
376 3l9v_A Putative thiol-disulfid 56.9 12 0.0004 30.4 4.4 20 315-337 135-154 (189)
377 2imf_A HCCA isomerase, 2-hydro 55.0 7.6 0.00026 31.9 3.0 38 315-360 157-194 (203)
378 1s3c_A Arsenate reductase; ARS 54.2 7.3 0.00025 30.2 2.5 77 273-358 4-86 (141)
379 3rdw_A Putative arsenate reduc 52.9 6.5 0.00022 29.6 2.0 34 273-313 7-40 (121)
380 1un2_A DSBA, thiol-disulfide i 52.7 8 0.00027 31.8 2.7 20 315-337 40-59 (197)
381 2d8c_A Phosphatidylcholine:cer 52.1 7.3 0.00025 28.1 2.1 21 151-171 14-34 (97)
382 3f0i_A Arsenate reductase; str 51.0 9 0.00031 28.7 2.5 33 273-312 6-38 (119)
383 2gle_A Neurabin-1; SAM domain, 49.3 3.9 0.00013 27.7 0.2 20 152-171 2-21 (74)
384 3bs7_A Protein aveugle; sterIl 45.3 6.5 0.00022 26.9 0.9 18 152-169 1-18 (78)
385 3bq7_A Diacylglycerol kinase d 44.4 12 0.0004 25.8 2.1 23 150-172 3-25 (81)
386 1kw4_A Polyhomeotic; SAM domai 43.7 12 0.0004 26.5 2.0 20 152-171 12-32 (89)
387 2yci_X 5-methyltetrahydrofolat 42.0 67 0.0023 27.7 7.1 69 2-70 92-171 (271)
388 3fz5_A Possible 2-hydroxychrom 39.4 21 0.00072 29.1 3.3 38 314-359 162-199 (202)
389 3rpp_A Glutathione S-transfera 37.8 29 0.00099 29.2 4.0 41 315-359 172-212 (234)
390 2imf_A HCCA isomerase, 2-hydro 35.3 50 0.0017 26.7 5.0 34 273-307 3-36 (203)
391 1r4w_A Glutathione S-transfera 34.4 36 0.0012 28.2 4.0 42 314-359 171-212 (226)
392 3lyk_A Stringent starvation pr 33.7 1.1E+02 0.0038 24.5 7.0 59 271-337 5-63 (216)
393 1s3a_A NADH-ubiquinone oxidore 33.4 1.3E+02 0.0045 21.5 7.1 74 272-360 21-97 (102)
394 1v85_A Similar to ring finger 32.2 18 0.00061 25.6 1.5 23 149-171 12-34 (91)
395 1f6y_A 5-methyltetrahydrofolat 31.8 1.2E+02 0.004 26.0 7.0 68 2-69 83-161 (262)
396 3l4e_A Uncharacterized peptida 31.6 70 0.0024 26.3 5.3 100 18-118 12-120 (206)
397 1c9k_A COBU, adenosylcobinamid 30.3 37 0.0013 27.4 3.3 32 13-47 4-36 (180)
398 2e8o_A SAM domain and HD domai 29.2 22 0.00074 25.8 1.5 22 151-172 24-45 (103)
399 3vhs_A ATPase wrnip1; zinc fin 28.7 3.6 0.00012 21.4 -2.0 11 280-290 8-18 (29)
400 3bs5_B Connector enhancer of k 28.2 30 0.001 23.5 2.1 19 152-170 2-20 (80)
401 3tnj_A Universal stress protei 27.2 1.1E+02 0.0037 22.7 5.5 33 10-42 7-44 (150)
402 3loq_A Universal stress protei 26.8 2.6E+02 0.0088 23.6 8.5 57 10-66 171-232 (294)
403 4dej_A Glutathione S-transfera 26.2 1.4E+02 0.0046 24.5 6.3 58 268-331 8-66 (231)
404 4hoj_A REGF protein; GST, glut 26.1 1.6E+02 0.0053 23.5 6.6 53 273-331 4-56 (210)
405 3ir4_A Glutaredoxin 2; glutath 26.0 96 0.0033 25.0 5.3 52 273-331 4-55 (218)
406 3bs5_A Protein aveugle; sterIl 24.6 23 0.00079 25.9 0.9 21 149-169 18-38 (106)
407 2a2p_A Selenoprotein M, SELM p 24.2 88 0.003 23.7 4.1 35 325-359 54-88 (129)
408 1pk1_B Sex COMB on midleg CG94 23.9 38 0.0013 23.8 2.0 19 152-170 12-30 (89)
409 2f3n_A SH3 and multiple ankyri 23.8 43 0.0015 22.5 2.2 19 154-172 2-20 (76)
410 1uhr_A SWI/SNF related, matrix 23.5 33 0.0011 24.4 1.6 13 160-172 34-46 (93)
411 1v31_A Hypothetical protein RA 23.3 33 0.0011 24.3 1.6 14 159-172 33-46 (93)
412 2dqw_A Dihydropteroate synthas 23.3 1.3E+02 0.0046 26.2 5.8 66 3-69 118-198 (294)
413 1k0m_A CLIC1, NCC27, chloride 23.2 2.2E+02 0.0076 23.3 7.2 47 279-331 22-68 (241)
414 1q7z_A 5-methyltetrahydrofolat 23.2 1.7E+02 0.0059 28.1 7.1 69 2-70 398-475 (566)
415 3lxz_A Glutathione S-transfera 23.0 2.3E+02 0.008 22.7 7.2 53 273-332 3-55 (229)
416 2l5y_A Stromal interaction mol 22.9 22 0.00077 27.8 0.6 23 150-172 74-97 (150)
417 1yy7_A SSPA, stringent starvat 22.9 2.6E+02 0.0091 22.1 7.5 54 272-331 10-63 (213)
418 1v32_A AT5G08430, hypothetical 22.8 27 0.00092 25.3 1.0 13 160-172 42-54 (101)
419 1fme_A FSD-EY peptide; beta-BE 22.8 64 0.0022 16.5 2.1 15 347-361 12-26 (28)
420 1z9h_A Membrane-associated pro 22.6 1.6E+02 0.0054 25.1 6.3 53 270-332 12-66 (290)
421 4glt_A Glutathione S-transfera 21.4 1.3E+02 0.0045 24.4 5.3 58 273-337 23-80 (225)
422 3ndn_A O-succinylhomoserine su 20.9 3.6E+02 0.012 24.3 8.7 62 7-70 93-154 (414)
423 3hzh_A Chemotaxis response reg 20.8 2.3E+02 0.0079 21.0 6.3 66 3-70 54-120 (157)
424 2k60_A Protein (stromal intera 20.3 27 0.00093 27.3 0.6 22 150-171 74-96 (150)
425 3idf_A USP-like protein; unive 20.1 2.2E+02 0.0076 20.5 6.0 35 10-44 2-42 (138)
No 1
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.1e-56 Score=403.76 Aligned_cols=216 Identities=54% Similarity=1.096 Sum_probs=181.0
Q ss_pred CHHHHhHhCCcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHH
Q 018045 1 MDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVR 79 (361)
Q Consensus 1 i~~~~~~~~~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~ 79 (361)
|++++++|+++++|+|| ||||++| ||+.+.++++.++|+|||.+||||++|+++++++||++++++.|+...+.++..
T Consensus 46 l~~a~~~~g~~i~Va~S-GkDS~vLL~Ll~~~~~~i~vv~iDtg~~~~et~~~v~~~~~~~gi~l~v~~~~~~~~~~~~~ 124 (275)
T 2goy_A 46 LKAAFEHFGDELWISFS-GAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREHYGIAIDVLSPDPRLLEPLVK 124 (275)
T ss_dssp HHHHHHHHSTTEEEECC-SSTTHHHHHHHHHHCTTCCEEEECCSCCCHHHHHHHHHHHHHHTCCCEEECCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEee-cHHHHHHHHHHHHhCCCceEEEEeCCCCCHHHHHHHHHHHHHHCCeEEEEeCCccCHHHHHH
Confidence 57899999889999999 9999877 999999999999999999999999999999999999999999998644555566
Q ss_pred hcCCCCCCccchhchhhccccHHHHHHHccCCEEEEeeeccCC-ccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCc
Q 018045 80 SKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQS-PGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVK 158 (361)
Q Consensus 80 ~~~~~~~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es-~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~ 158 (361)
..|.+.++..++++||.++|++|++++++++++|++|+|++|+ . .|..+++++.+..+.. ..++..+++||++|+
T Consensus 125 ~~g~~~~~~~~~~~cc~~~K~~pl~r~l~~~~~~itG~r~dds~~-~R~~~~~~~~d~~~~~---~~~g~~~i~PL~~wt 200 (275)
T 2goy_A 125 EKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSPG-TRSQVAVLEIDGAFST---PEKPLYKFNPLSSMT 200 (275)
T ss_dssp HHCSCHHHHHCTHHHHHHHTHHHHHHHHHTCSEEECCCCGGGTTS-CSCCCCSEEECTTTCC---SSSCCEEECTTTTCC
T ss_pred HhCCCCccccCHHHHHHHHHHHHHHHHHHhcCchhcCchhhhhhh-hhhhCccccccccccc---CCCCeEEEechHhCC
Confidence 6666555555678999999999999999999999999999999 5 8999999988753320 124678999999999
Q ss_pred HHHHHHHHHhCCCCCCccccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCCCCCC
Q 018045 159 GNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGNI 221 (361)
Q Consensus 159 ~~dv~~yi~~~~lp~~~lY~~g~~~~GC~~Ct~~~~~~~~~~~gr~~~~~~~~~~~g~~~~~i 221 (361)
++|||+|+++++|||||||++||+|+||++||.++.+|+++|+|||||++..|+|||||..++
T Consensus 201 ~~dV~~Yi~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~R~gRw~w~~~~k~ecGlh~~~~ 263 (275)
T 2goy_A 201 SEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGNL 263 (275)
T ss_dssp HHHHHHHHHHTTCCCCGGGGGTCSSCCCGGGBCCCCTTCCGGGGBSTTC--------------
T ss_pred HHHHHHHHHHhCCCCChHHHcCCCCCCCccCCCCCCCCCccccCccccCCCCCccCCCCcCcc
Confidence 999999999999999999999999999999999999999999999999999999999997654
No 2
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-53 Score=381.06 Aligned_cols=206 Identities=27% Similarity=0.436 Sum_probs=176.8
Q ss_pred CHHHHhHhCCcEEEEecchHHHHHH-HHHHHcCC---CceEEEccCCCCcHHHHHHHHHHHHHhCC----cEEEEcCChH
Q 018045 1 MDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGR---PFRVFSLDTGRLNPETYRFFDEVEKHFGI----RIEYMFPDAV 72 (361)
Q Consensus 1 i~~~~~~~~~~i~vs~SGGKDS~~l-~l~~~~~~---~i~v~~~dtg~~~pet~~~v~~~~~~~g~----~i~~~~p~~~ 72 (361)
|+|++++|+ +++|+|||||||++| ||+.+..+ +++++|+|||.+||||++|+++++++||+ +++++.|+..
T Consensus 34 l~~a~~~~~-~v~va~SGGkDS~vLL~ll~~~~~~~~~i~vv~iDtg~~~~et~~~v~~~~~~~gl~~~~~l~v~~~~~~ 112 (261)
T 2oq2_A 34 IAWSIVTFP-HLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTLKNEIEKKYYQPKNQTIHVYKPDGC 112 (261)
T ss_dssp HHHHHHHCS-SEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHHHHHHHHHHTGGGTCCCEEECSTTC
T ss_pred HHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhCccCCCeeEEEecCCCCCHHHHHHHHHHHHHhCCCCCCCeEEEecCCc
Confidence 578899995 899999999999877 99999876 89999999999999999999999999999 9999998741
Q ss_pred -HHHHHHHhcCCCCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeE
Q 018045 73 -EVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLV 149 (361)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~ 149 (361)
....+....|.. .+..++.+||..+|++|++++++ +.++|++|+|++|+. .|..++.+++++. ++.+
T Consensus 113 ~~~~~~~~~~G~~-~~~~~~~~cc~~~K~~pl~~~l~~~g~~~~~tG~R~dds~-~R~~~~~~~~~~~--------~~~~ 182 (261)
T 2oq2_A 113 ESEADFASKYGDF-LWEKDDDKYDYLAKVEPAHRAYKELHISAVFTGRRKSQGS-ARSQLSIIEIDEL--------NGIL 182 (261)
T ss_dssp SSHHHHHHHHCTT-HHHHCHHHHHHHHTHHHHHHHHHHTTCSEEECCCCGGGCG-GGGGCCSEEEETT--------TTEE
T ss_pred cCHHHHHHHhCCC-ccccChHHHHHHHhHHHHHHHHHHcCCCEEEEeccccchH-HHccCCceeecCC--------CCeE
Confidence 133444545542 23345689999999999999999 567999999999996 9999998887642 4688
Q ss_pred EEeeCccCcHHHHHHHHHhCCCCCCccccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCCCC
Q 018045 150 KWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKG 219 (361)
Q Consensus 150 ~~~Pi~~W~~~dv~~yi~~~~lp~~~lY~~g~~~~GC~~Ct~~~~~~~~~~~gr~~~~~~~~~~~g~~~~ 219 (361)
+++||++||++|||+|++.++|||||||++||+|+||++||.++.+|+++|+||| .+..|+|||||..
T Consensus 183 ki~PL~~wt~~dV~~Yi~~~~lp~~pLy~~Gy~siGC~~ct~~~~~~~~eR~gRw--~~~~k~ecGlh~~ 250 (261)
T 2oq2_A 183 KINPLINWTFEQVKQYIDANNVPYNELLDLGYRSIGDYHSTQPVKEGEDERAGRW--KGKAKTECGIHEA 250 (261)
T ss_dssp EECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCBGGGCCCCCTTSCTTTTTC-------CCCTTTCC
T ss_pred EEechHhCCHHHHHHHHHHcCCCCCchhhCCCCCCCCcCCCCcCCCCCCcccccc--CCCCCcccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999997 6778999999964
No 3
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=100.00 E-value=5.4e-52 Score=370.43 Aligned_cols=205 Identities=28% Similarity=0.477 Sum_probs=165.1
Q ss_pred CHHHHhHhCCcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHH
Q 018045 1 MDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVR 79 (361)
Q Consensus 1 i~~~~~~~~~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~ 79 (361)
|+|++++|+++++|+|||||||++| ||+.+..+++.++|+|||.+||||++|+++++++||++++++.|+.. ...+..
T Consensus 37 l~~a~~~~~~~v~va~SGG~DS~vLL~ll~~~~~~v~vv~idtg~~~~et~~~~~~~~~~~gi~~~v~~~~~~-~~~~~~ 115 (252)
T 2o8v_A 37 VAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATES-AAWQEA 115 (252)
T ss_dssp HHHHHTTSCSCEEEECCCSTTHHHHHHHHHHHSTTCEEEECCCSCBCHHHHHHHHHHHHHTTCEEEECCCSSC-HHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHHHHHHHHHHhCCceEEEcCCCC-HHHHHH
Confidence 4788999988999999999999877 99999989999999999999999999999999999999999988864 334445
Q ss_pred hcCCCCCCc--cchhchhhccccHHHHHHHccC--CEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCc
Q 018045 80 SKGLFSFYE--DGHQECCRVRKVRPLRRALKGL--RAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVA 155 (361)
Q Consensus 80 ~~~~~~~~~--~~~~~cc~~~K~~pl~~~~~~~--~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~ 155 (361)
..| ..+.. ..+.+||..+|+.|+++++++. ++|++|+|++|+. .|..++.++.. ++..+++||+
T Consensus 116 ~~g-~~~~~~~~~~~~cc~~~K~~pl~~~l~~~~~~~~~tG~r~dds~-~R~~l~~~~~~----------~~~~~i~PL~ 183 (252)
T 2o8v_A 116 RYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAIQ----------RGVFKVLPII 183 (252)
T ss_dssp HTC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCCSTTTT-CCTTSCSEEES----------SSSEEECGGG
T ss_pred HcC-CccccCCchHHHHHHHHHHHHHHHHHHhcCCcEEEEeccccccc-ccccCceeecC----------CCeEEEechh
Confidence 555 22222 1347899999999999999865 4699999999996 99999887532 2567999999
Q ss_pred cCcHHHHHHHHHhCCCCCCccccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCCCCCC
Q 018045 156 NVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGNI 221 (361)
Q Consensus 156 ~W~~~dv~~yi~~~~lp~~~lY~~g~~~~GC~~Ct~~~~~~~~~~~gr~~~~~~~~~~~g~~~~~i 221 (361)
+|+.+|||+|+++++||+||||++||+|+||++||.++.+|+++|+||| .+ .|+|||||....
T Consensus 184 ~wt~~dV~~y~~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~r~gRw--~~-~k~ecglh~~~~ 246 (252)
T 2o8v_A 184 DWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRF--FG-LKRECGLHEGLE 246 (252)
T ss_dssp SCCHHHHHHHHHHTTCCCCTTTTTTCSSCCBCTTTCC-----------------CCSCCCSCCC--
T ss_pred hCCHHHHHHHHHHcCCCCChHHhCCCCCCCCcCcCCcCCCCCCcccccc--CC-CCccCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999997 45 889999997643
No 4
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=100.00 E-value=1.4e-44 Score=323.19 Aligned_cols=165 Identities=18% Similarity=0.270 Sum_probs=141.0
Q ss_pred CHHHHhHhC---CcEEEEecchHHHHHH-HHHHHc----------------------CCCceEEEccCCCCcHHHHHHHH
Q 018045 1 MDRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRVFSLDTGRLNPETYRFFD 54 (361)
Q Consensus 1 i~~~~~~~~---~~i~vs~SGGKDS~~l-~l~~~~----------------------~~~i~v~~~dtg~~~pet~~~v~ 54 (361)
|++++++|+ +++++||||||||+|| ||+.+. .++++|+|+|||++||||++|++
T Consensus 47 Lrea~~~f~~~~~~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipvifiDTG~~FpET~ef~d 126 (308)
T 3fwk_A 47 INETFPKWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPTVFIDHDDTFKTLENFIE 126 (308)
T ss_dssp HHHTTTTSCSSSSSEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHcccccCCEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccEEEEeCCCCCHHHHHHHH
Confidence 468889997 6899999999999876 998774 15799999999999999999999
Q ss_pred HHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCccchhchhhccccHHHHHHHccCCEEEEeeeccCCccCccCCCceec
Q 018045 55 EVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQV 134 (361)
Q Consensus 55 ~~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~~R~~~~~~~~ 134 (361)
+++++||++++++.|+.... -...||..+|++| +.++||+|+|++| + .|++++.++.
T Consensus 127 ~~~~~ygL~L~v~~p~~~~~---------------~~~~cc~~~K~~P------~~~AwitG~RR~e-~-~Ra~l~~~e~ 183 (308)
T 3fwk_A 127 ETSLRYSLSLYESDRDKCET---------------MAEAFETFLQVFP------ETKAIVIGIRHTD-P-FGEHLKPIQK 183 (308)
T ss_dssp HHHHHTTEEEEECCTTSCCC---------------HHHHHHHHHHHCT------TCCEEECCCCTTS-T-TCTTCCSEEE
T ss_pred HHHHHhCCcEEEeCCCCCHH---------------HHHHHHHHHHhCC------CCCEEEEEeecCC-c-ccCCCCeeec
Confidence 99999999999998863210 1257999999988 5889999999996 5 8999998886
Q ss_pred CCCCcCCcCCCCCeEEEeeCccCcHHHHHHHHHhCCCCCCccccCCCCCCCCCCCCCCCC
Q 018045 135 DPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVL 194 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~Pi~~W~~~dv~~yi~~~~lp~~~lY~~g~~~~GC~~Ct~~~~ 194 (361)
+.. .+++.++++||++||+.|||.||+.++|||||||++||+||||++||+|..
T Consensus 184 ~d~------~w~~~iKVnPL~dWT~~DVW~YI~~~~LPynpLYd~GY~SIGC~~CT~pnp 237 (308)
T 3fwk_A 184 TDA------NWPDFYRLQPLLHWNLANIWSFLLYSNEPICELYRYGFTSLGNVEETLPNP 237 (308)
T ss_dssp CCT------TSCSCEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCCTTTBCCCG
T ss_pred cCC------CCCCeEEEechhhCCHHHHHHHHHHcCCCCCcHHhcCCCCCCCCccCCCCh
Confidence 521 235789999999999999999999999999999999999999999999763
No 5
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=100.00 E-value=1.9e-41 Score=311.44 Aligned_cols=194 Identities=26% Similarity=0.435 Sum_probs=132.4
Q ss_pred CHHHHhHhCCcEEEEecchHHHHHH-HHHHHc----CCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHH
Q 018045 1 MDRALEKFGNDIAIAFSGAEDVALI-EYAHLT----GRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQ 75 (361)
Q Consensus 1 i~~~~~~~~~~i~vs~SGGKDS~~l-~l~~~~----~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~ 75 (361)
|++++++| ++++|+|||||||++| ||+.+. +++++++|+|||.+||||++|+++++++||++++++.++..
T Consensus 39 lr~~~~~~-~~ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDtg~~~~et~~~v~~~~~~~gi~l~v~~~~~~--- 114 (325)
T 1zun_A 39 IREVAAEF-DNPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLDLITHINPDG--- 114 (325)
T ss_dssp HHHHHHHC-SSEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCEEEECC------
T ss_pred HHHHHHhC-CCEEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCchH---
Confidence 46788888 5999999999999877 998886 56899999999999999999999999999999999987643
Q ss_pred HHHHhcCCCCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCcee-------cCCCCc-------
Q 018045 76 ALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQ-------VDPVFE------- 139 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~-------~~~~~~------- 139 (361)
...|.+. +..++++||..+|+.|++++++ ++++|++|+|+||+. .|+.+++++ ++++..
T Consensus 115 ---~~~G~~~-~~~~~~~cc~~~K~~pL~~~l~e~g~~~i~tG~R~Des~-~Ra~~~~~~~r~~~~~~d~~~~rp~l~~~ 189 (325)
T 1zun_A 115 ---VAQGINP-FTHGSAKHTDIMKTEGLKQALDKHGFDAAFGGARRDEEK-SRAKERVYSFRDSKHRWDPKNQRPELWNV 189 (325)
T ss_dssp ---------------CCHHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSG-GGGGCCSEEEECTTCCBCGGGCCCCCSSC
T ss_pred ---HhcCCCc-cccChHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhh-hhhcccceeccccccccCccccCcchhhh
Confidence 1123322 2235668999999999999998 688999999999996 999888876 332110
Q ss_pred --CCcCCCCCeEEEeeCccCcHHHHHHHHHhCCCCCCccc-------------------cCC------------------
Q 018045 140 --GLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLH-------------------SQG------------------ 180 (361)
Q Consensus 140 --~~~~~~~~~~~~~Pi~~W~~~dv~~yi~~~~lp~~~lY-------------------~~g------------------ 180 (361)
.+ ...++.++++||++|+++|||+|++.++||+|||| ++|
T Consensus 190 ~n~~-~~~g~~~~i~PLl~wt~~dIw~Yi~~~~lp~~~LY~~~~r~~~~r~g~~~~~~~~~g~~~~~~~~~~~~~~~~~r 268 (325)
T 1zun_A 190 YNGN-VNKGESIRVFPLSNWTELDIWQYIYLEGIPIVPLYFAAERDVIEKNGTLIMIDDERILEHLTDEEKSRIVKKKVR 268 (325)
T ss_dssp CCCC-CCTTCEEEECTTTTCCHHHHHHHHHHHTCCCCSCCSCC-------------------------------------
T ss_pred cccc-ccCCCeEEEEchhhCCHHHHHHHHHHhCCCcchhhhcccccccccCCceeccchhhcccccCCCccccccccccc
Confidence 00 01124788999999999999999999999999999 689
Q ss_pred CCCCCCCCCCCCCCCCC---------------CCcCCCC
Q 018045 181 YISIGCEPCTRPVLPGQ---------------HEREGRW 204 (361)
Q Consensus 181 ~~~~GC~~Ct~~~~~~~---------------~~~~gr~ 204 (361)
|+||||++||.++.+++ .||.|||
T Consensus 269 y~siGc~~cT~~v~~~~~~~~~~~~~~~~~~~~er~~R~ 307 (325)
T 1zun_A 269 FRTLGCYPLTGAVESEATSLTDIIQEMLLTRTSERQGRV 307 (325)
T ss_dssp ---------------------------------------
T ss_pred cCCcCCcccCCccCCCCccHHHHHHHHHhcCCCcccccc
Confidence 99999999999998763 5788886
No 6
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-39 Score=295.78 Aligned_cols=180 Identities=17% Similarity=0.270 Sum_probs=139.5
Q ss_pred HHHHhHhC---CcEEEEecchHHHHHH-HHHHHc----------------------CCCceEEEccCCCCcHHHHHHHHH
Q 018045 2 DRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRVFSLDTGRLNPETYRFFDE 55 (361)
Q Consensus 2 ~~~~~~~~---~~i~vs~SGGKDS~~l-~l~~~~----------------------~~~i~v~~~dtg~~~pet~~~v~~ 55 (361)
++++++|+ ++++|||||||||+|| ||+.+. +++++++|+|||.+||||++|+++
T Consensus 43 ~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet~~fv~~ 122 (306)
T 2wsi_A 43 SEIFVRWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFVLE 122 (306)
T ss_dssp HTTTTTSCSSSSSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHHHH
T ss_pred HHHHHHcccccCCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHHHHHHHH
Confidence 45667776 5899999999999877 888764 467999999999999999999999
Q ss_pred HHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCccchhchhhccccHHHHHHHccCCEEEEeeeccCCccCccCCCceecC
Q 018045 56 VEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVD 135 (361)
Q Consensus 56 ~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~~R~~~~~~~~~ 135 (361)
++++||++++++.++... .. .+ ...+...+|..| ..+++++|+|++|+. .|+...+...+
T Consensus 123 ~~~~ygl~l~v~~~~~~~------~~---~l----~~~~~~~~k~~p------~~~aii~G~Rrdds~-~r~l~~~~~~d 182 (306)
T 2wsi_A 123 TSERYCLSLYESQRQSGA------SV---NM----ADAFRDFIKIYP------ETEAIVIGIRHTDPF-GEALKPIQRTD 182 (306)
T ss_dssp HHHHTTEEEEECCC-----------C---CH----HHHHHHHHHHCT------TCCEEECCCCCCSSS-CCCCCSEEECC
T ss_pred HHHHcCCCEEEEeCCccc------cc---cH----HHHHHHHHhhCC------CCcEEEEEEeccccc-ccccCceeccC
Confidence 999999999998776320 00 00 011222234333 356899999999995 77665543333
Q ss_pred CCCcCCcCCCCCeEEEeeCccCcHHHHHHHHHhCCCCCCccccCCCCCCCCCCCCCCCCC---CCCCcCCCCCCCC
Q 018045 136 PVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLP---GQHEREGRWWWED 208 (361)
Q Consensus 136 ~~~~~~~~~~~~~~~~~Pi~~W~~~dv~~yi~~~~lp~~~lY~~g~~~~GC~~Ct~~~~~---~~~~~~gr~~~~~ 208 (361)
. +++++++++||++|+++|||.||+.++|||||||++||+||||++||.|... +.+.+.+||||+-
T Consensus 183 ~-------~~p~~~ri~PL~dWt~~DVw~Yi~~~~lpy~pLYd~GY~SiGc~~cT~pnp~l~~~~~~~~~~~~we~ 251 (306)
T 2wsi_A 183 S-------NWPDFMRLQPLLHWDLTNIWSFLLYSNEPICGLYGKGFTSIGGINNSLPNPHLRKDSNNPALHFEWEI 251 (306)
T ss_dssp T-------TSCSCEEECTTTTCCHHHHHHHHHHHCCCBCHHHHTTCSSCCCTTTBCSCGGGBGGGCCCCCSCHHHH
T ss_pred C-------CCCCcEEEeChHHCCHHHHHHHHHHcCCCCChhHhcCCCcCCcccCCCcCHHHhcccccccccccccc
Confidence 2 3356899999999999999999999999999999999999999999987643 3456788999974
No 7
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=100.00 E-value=5.1e-38 Score=274.21 Aligned_cols=175 Identities=25% Similarity=0.445 Sum_probs=149.3
Q ss_pred CHHHHhHhCCcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHH
Q 018045 1 MDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVR 79 (361)
Q Consensus 1 i~~~~~~~~~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~ 79 (361)
|+++++.|+++++|+|||||||++| ||+.+.+.++.++|+|||.++|++++|+++++++||++++++.++.. ......
T Consensus 36 l~~~~~~~~~~v~Va~SGGkDS~vLL~ll~~~~~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~~~~~-~~~~~~ 114 (215)
T 1sur_A 36 VAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATES-AAWQEA 114 (215)
T ss_dssp HHHHHHHCCSEEEEECCCCTTHHHHHHHHHHHSTTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEECSSC-HHHHHH
T ss_pred HHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCCCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEeCCCC-HHHHHH
Confidence 4688899988999999999999877 99999889999999999999999999999999999999999988753 233344
Q ss_pred hcCCCCCCc--cchhchhhccccHHHHHHHccCC--EEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCc
Q 018045 80 SKGLFSFYE--DGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVA 155 (361)
Q Consensus 80 ~~~~~~~~~--~~~~~cc~~~K~~pl~~~~~~~~--~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~ 155 (361)
..| ..+.. ...++||..+|..|+++++++.. ++++|+|++|+. .|..++.++.. ++...++||+
T Consensus 115 ~~g-~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~i~~G~r~dd~~-~r~~~~~~~~~----------~~~~~i~PLl 182 (215)
T 1sur_A 115 RYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAIQ----------RGVFKVLPII 182 (215)
T ss_dssp HHC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTEEEEECCCCTTSSS-TTTTCCSEEEE----------TTEEEECTTT
T ss_pred hcC-CCCCCCccHHHHHHHHHHHHHHHHHHHhcCCceEEEEeehhhhh-hhcCCCccccC----------CCEEEEechH
Confidence 444 21111 13478999999999999998664 799999999996 89888776532 2567899999
Q ss_pred cCcHHHHHHHHHhCCCCCCccccCCCCCCCCCC
Q 018045 156 NVKGNDIWNFLRTMDVPINSLHSQGYISIGCEP 188 (361)
Q Consensus 156 ~W~~~dv~~yi~~~~lp~~~lY~~g~~~~GC~~ 188 (361)
+|+++|||+|++.++||+||||++||+|+||+|
T Consensus 183 ~~t~~dI~~y~~~~~lp~~~lY~~Gy~siGC~p 215 (215)
T 1sur_A 183 DWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTH 215 (215)
T ss_dssp TCCHHHHHHHHHHHTCCCCGGGGGTCSCCCBCC
T ss_pred hCCHHHHHHHHHHhCCCCChHHhCCCCCCCCCC
Confidence 999999999999999999999999999999986
No 8
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.88 E-value=4e-22 Score=153.18 Aligned_cols=103 Identities=19% Similarity=0.377 Sum_probs=88.3
Q ss_pred ceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
|.++ +.++|++.+. ...+++++|+|||+||++|+.+.|.++++++.+++ +.|++||++++ ++++ ++|+|+++||
T Consensus 2 V~~i~~~~~f~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~-~~l~-~~~~V~~~PT 76 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLN-EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDEC-EDIA-QDNQIACMPT 76 (105)
T ss_dssp CEECCSHHHHHHHHH-HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTC-HHHH-HHTTCCBSSE
T ss_pred eEEeCCHHHHHHHHH-hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccC-HHHH-HHcCCCeecE
Confidence 4556 4578998875 23578999999999999999999999999999865 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 361 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~~ 361 (361)
+++|++|+. ...+.| .+.++|.++|++.+
T Consensus 77 ~~~~~~G~~-v~~~~G--~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 77 FLFMKNGQK-LDSLSG--ANYDKLLELVEKNK 105 (105)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHHC
T ss_pred EEEEECCEE-EEEEeC--cCHHHHHHHHHhcC
Confidence 999999984 334444 68999999999864
No 9
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.87 E-value=2.5e-21 Score=154.11 Aligned_cols=109 Identities=15% Similarity=0.359 Sum_probs=96.6
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC----CCeEEEEEEcCCCchHHHHHcC
Q 018045 247 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKL 322 (361)
Q Consensus 247 ~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~~~~l~~~~~ 322 (361)
.+..|.+|++++|++.+. +++++++|+|||+||++|+.+.|.|+++++.+.. .++.|+.||++.+ .+++ ++|
T Consensus 13 ~~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~ 88 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY-PDVI-ERM 88 (127)
T ss_dssp CCCCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC-HHHH-HHT
T ss_pred CCCceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc-HhHH-Hhc
Confidence 346799999999999874 3589999999999999999999999999998742 3699999999999 9999 999
Q ss_pred CCCCCCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 018045 323 QLGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~~~Pt~~~~~~g~~~-~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|.++||+++|++|+.. ...|.| .++.++|.+||+++
T Consensus 89 ~v~~~Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 89 RVSGFPTMRYYTRIDKQEPFEYSG-QRYLSLVDSFVFQN 126 (127)
T ss_dssp TCCSSSEEEEECSSCSSSCEECCS-CCCHHHHHHHHHHH
T ss_pred CCccCCEEEEEeCCCCCCceEecC-CccHHHHHHHHHhc
Confidence 99999999999988753 368887 79999999999875
No 10
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.85 E-value=5.7e-21 Score=154.01 Aligned_cols=105 Identities=11% Similarity=0.127 Sum_probs=89.3
Q ss_pred ceecC-cccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l~-~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
+..|+ .++|++.+. ...+++|||.|||+||+||+.+.|.|+++++++++ .+.|++||+|++ ++++ .+|+|.++||
T Consensus 23 v~~l~t~~~f~~~v~-~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~-~e~a-~~y~V~siPT 98 (160)
T 2av4_A 23 LQHLNSGWAVDQAIV-NEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV-PDFN-TMYELYDPVS 98 (160)
T ss_dssp CEECCSHHHHHHHHH-HCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TTTTCCSSEE
T ss_pred hhccCCHHHHHHHHH-hcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCCCCCE
Confidence 66775 478988763 13688999999999999999999999999999987 799999999999 9999 9999999999
Q ss_pred EEEEeCCCCCe-e-------ecCCCCCC-HHHHHHHHHHh
Q 018045 330 ILFFPKHSSKP-I-------KYPSERRD-VDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~-~-------~~~~~~~~-~~~l~~~i~~~ 360 (361)
+++|++|+... . ...| ..+ .++|.++|+++
T Consensus 99 ~~fFk~G~~v~vd~Gtgd~~k~vG-a~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 99 VMFFYRNKHMMIDLGTGNNNKINW-PMNNKQEFIDIVETI 137 (160)
T ss_dssp EEEEETTEEEEEECSSSCCSCBCS-CCCCHHHHHHHHHHH
T ss_pred EEEEECCEEEEEecCCCCcCeEEe-ecCCHHHHHHHHHHH
Confidence 99999998421 1 4555 555 89999999864
No 11
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.85 E-value=2.6e-21 Score=153.66 Aligned_cols=107 Identities=9% Similarity=0.186 Sum_probs=92.1
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCC--hhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCC
Q 018045 247 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWC--QFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL 324 (361)
Q Consensus 247 ~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC--~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v 324 (361)
.......+++++|++.+. +.++++||+|||+|| ++|+.+.|+++++++.|.+ ++.|++||+|++ ++++ .+|+|
T Consensus 13 ~~~g~~~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~-~~la-~~ygV 87 (137)
T 2qsi_A 13 RPNAPTLVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE-RGLM-ARFGV 87 (137)
T ss_dssp ----CEEECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH-HHHH-HHHTC
T ss_pred HhcCCcccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCC
Confidence 335567899999999885 234599999999999 9999999999999999987 899999999999 9999 99999
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++||+++|++|+ .+....|..+.++|.++|+++
T Consensus 88 ~siPTlilFkdG~--~v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 88 AVCPSLAVVQPER--TLGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp CSSSEEEEEECCE--EEEEEESCCCHHHHHHHHHHH
T ss_pred ccCCEEEEEECCE--EEEEEeCCCCHHHHHHHHHHH
Confidence 9999999999999 454444578999999999864
No 12
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.84 E-value=2.3e-21 Score=154.49 Aligned_cols=103 Identities=11% Similarity=0.071 Sum_probs=93.5
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCC--ChhHHhhHHHHHHHHHHhcCCC-eEEEEEEcCCCchHHHHHcCCCCC
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNG-VKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~w--C~~C~~~~p~~~~la~~~~~~~-v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
.+..+++++|++.+. +++++||+|||+| |++|+.+.|.+++++++|.+ + +.|++||+|++ ++++ .+|+|++
T Consensus 18 g~~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~-~~lA-~~ygV~s 91 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQS-EAIG-DRFGAFR 91 (140)
T ss_dssp TCEECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHH-HHHH-HHHTCCS
T ss_pred CCccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCC-HHHH-HHcCCcc
Confidence 678999999999886 7889999999999 99999999999999999988 7 99999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+ .+....|..+.++|.++|+++
T Consensus 92 IPTlilFk~G~--~v~~~~G~~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 92 FPATLVFTGGN--YRGVLNGIHPWAELINLMRGL 123 (140)
T ss_dssp SSEEEEEETTE--EEEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCE--EEEEEecCCCHHHHHHHHHHH
Confidence 99999999999 444444478999999999864
No 13
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.83 E-value=6.1e-20 Score=142.03 Aligned_cols=105 Identities=19% Similarity=0.277 Sum_probs=94.1
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..|.+++.++|++.+. +++++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 78 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEE-KTLF-QRFSLKGVP 78 (111)
T ss_dssp CCSEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSC
T ss_pred CcceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcC-hhHH-HhcCCCcCC
Confidence 4688999999999883 3789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 79 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 79 QILYFKDGEY-KGKMAG-DVEDDEVEQMIADV 108 (111)
T ss_dssp EEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEec-cCCHHHHHHHHHHH
Confidence 9999998873 345555 68999999999875
No 14
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=6.6e-20 Score=148.17 Aligned_cols=105 Identities=26% Similarity=0.534 Sum_probs=95.8
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCC--CeEEEEEEcCCCchHHHHHcCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQLG 325 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~--~v~~~~vd~~~~~~~l~~~~~~v~ 325 (361)
...|..|+.++|++++. .++++||+||++||++|+.+.|.|+++++.+++. ++.|+.||++.+ .+++ ++|+|.
T Consensus 16 ~~~v~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~ 90 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA-SMLA-SKFDVS 90 (140)
T ss_dssp ETTEEECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC-HHHH-HHTTCC
T ss_pred CCCCEEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc-HHHH-HHCCCC
Confidence 46799999999999886 7899999999999999999999999999999872 499999999999 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++||+++|++|+ ...+.| ..+.++|.+||+++
T Consensus 91 ~~Pt~~~~~~G~--~~~~~g-~~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 91 GYPTIKILKKGQ--AVDYDG-SRTQEEIVAKVREV 122 (140)
T ss_dssp SSSEEEEEETTE--EEECCS-CCCHHHHHHHHHHH
T ss_pred ccCeEEEEECCc--EEEcCC-CCCHHHHHHHHHHh
Confidence 999999998887 677777 79999999999875
No 15
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.2e-19 Score=144.69 Aligned_cols=107 Identities=27% Similarity=0.523 Sum_probs=95.7
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
...|.+|+.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ .+.|+.||++.+ .+++ ++|+|.++
T Consensus 16 ~~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~~ 90 (130)
T 2dml_A 16 SDDVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKH-QSLG-GQYGVQGF 90 (130)
T ss_dssp TSSSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHHTCCSS
T ss_pred CCCcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCC-HHHH-HHcCCCcc
Confidence 36799999999998653 3688999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+.....+.| ..+.++|.+||.+.
T Consensus 91 Pt~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 91 PTIKIFGANKNKPEDYQG-GRTGEAIVDAALSA 122 (130)
T ss_dssp SEEEEESSCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEeCCCCeEEEeec-CCCHHHHHHHHHHH
Confidence 999999988765667776 78999999999764
No 16
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.82 E-value=9.6e-20 Score=151.80 Aligned_cols=109 Identities=16% Similarity=0.278 Sum_probs=93.1
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEEC-------CCChhHHhhHHHHHHHHHHhc-----CCCeEEEEEEcCCCc
Q 018045 247 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYA-------PWCQFCQAMEGSYVELADKLA-----GNGVKVGKFRADGDQ 314 (361)
Q Consensus 247 ~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a-------~wC~~C~~~~p~~~~la~~~~-----~~~v~~~~vd~~~~~ 314 (361)
.+..|++||+++|++++. ...+.++||+||| +||++|+.+.|+|+++++.+. + ++.|++||++++
T Consensus 16 ~~~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d~~- 92 (178)
T 3ga4_A 16 DDTGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVNEV- 92 (178)
T ss_dssp CTTSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETTTC-
T ss_pred ccCCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECccC-
Confidence 346799999999999874 2346689999999 499999999999999999997 5 799999999999
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCe-----------eecC---CCCCCHHHHHHHHHH
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKP-----------IKYP---SERRDVDSLMAFVDA 359 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~-----------~~~~---~~~~~~~~l~~~i~~ 359 (361)
++++ ++|+|+++||+++|++|+... ..|. +..++++.|.+||.+
T Consensus 93 ~~la-~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 93 PQLV-KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp HHHH-HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred HHHH-HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 9999 999999999999999987533 3441 225899999999975
No 17
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.82 E-value=9.1e-20 Score=147.57 Aligned_cols=109 Identities=24% Similarity=0.417 Sum_probs=93.7
Q ss_pred CCCCceecCcccHHHHHhhcC---------CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHH
Q 018045 247 NSQNLVTLNRTGMENLARLDH---------RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEY 317 (361)
Q Consensus 247 ~~~~v~~l~~~~f~~~~~~~~---------~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l 317 (361)
.+..|..++.++|+..+...+ .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKE-PEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCC-HHH
Confidence 446799999999998876322 478999999999999999999999999999987 799999999999 999
Q ss_pred HHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 318 AKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 318 ~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+ ++|+|.++||+++|+.++. ...+.| ..+.++|.++|+++
T Consensus 98 ~-~~~~v~~~Pt~~~~~~~g~-~~~~~G-~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 98 A-RDFGIQSIPTIWFVPMKGE-PQVNMG-ALSKEQLKGYIDKV 137 (141)
T ss_dssp H-HHTTCCSSSEEEEECSSSC-CEEEES-CCCHHHHHHHHHHT
T ss_pred H-HHcCCCCcCEEEEEeCCCC-EEEEeC-CCCHHHHHHHHHHH
Confidence 9 9999999999999955443 456666 68999999999875
No 18
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.82 E-value=1.1e-19 Score=139.95 Aligned_cols=105 Identities=24% Similarity=0.397 Sum_probs=95.0
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
++.|..++.++|++++. ++++++|+||++||++|+.+.|.++++++.+++ .+.|+.||++.+ ++++ ++|+|.++
T Consensus 3 ~~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~ 76 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIR---NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDEN-QKIA-DKYSVLNI 76 (109)
T ss_dssp CCCCEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCeEEEecHHHHHHHHh---cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccC-HHHH-HhcCcccC
Confidence 35688999999999987 699999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 Pt~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 77 PTTLIFVNGQL-VDSLVG-AVDEDTLESTVNKY 107 (109)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEEEcCCcE-EEeeec-cCCHHHHHHHHHHH
Confidence 99999988874 444555 68999999999875
No 19
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.82 E-value=1.6e-19 Score=138.96 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=92.7
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.|.+++.++|++.+. +++++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 76 (108)
T ss_dssp TTEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-TTHH-HHTTCCSSS
T ss_pred CcceecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCcccC
Confidence 4688999999997552 4789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 77 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 106 (108)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEec-CCCHHHHHHHHHHh
Confidence 9999988873 334555 68999999999875
No 20
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.81 E-value=2.4e-19 Score=142.26 Aligned_cols=111 Identities=16% Similarity=0.213 Sum_probs=93.1
Q ss_pred cccccccCCCCceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHH
Q 018045 240 EAVADIFNSQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA 318 (361)
Q Consensus 240 ~~~~~~~~~~~v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~ 318 (361)
++..+-.....|.+|++ ++|++++. .+++++|+|||+||++|+.+.|.|+++++.++ ++.|+.||++.+ .+++
T Consensus 10 ~~~~~~~~~~mv~~l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~-~~l~ 83 (125)
T 1r26_A 10 HGIRMRARYPSVVDVYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNN-SEIV 83 (125)
T ss_dssp --CCCSSCCSCCEEECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTC-HHHH
T ss_pred cceeeeccccceEECCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCC-HHHH
Confidence 33333333345889998 99999886 89999999999999999999999999999985 599999999999 9999
Q ss_pred HHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 319 KQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 319 ~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|+|.++||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 84 -~~~~v~~~Pt~~i~~~G~~-~~~~~G--~~~~~l~~~l~~~ 121 (125)
T 1r26_A 84 -SKCRVLQLPTFIIARSGKM-LGHVIG--ANPGMLRQKLRDI 121 (125)
T ss_dssp -HHTTCCSSSEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred -HHcCCCcccEEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 9999999999999998873 334444 5889999999875
No 21
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.81 E-value=3.2e-19 Score=136.93 Aligned_cols=106 Identities=21% Similarity=0.345 Sum_probs=93.7
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.|.+++.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN-PETP-NAYQVRSIP 76 (107)
T ss_dssp CCEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC-CHHH-HHTTCCSSS
T ss_pred CceeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC-HHHH-HhcCCCccC
Confidence 4689999999997652 4789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 361 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~~ 361 (361)
|+++|++|+. ...+.| ..+.++|.++|+++.
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 77 TLMLVRDGKV-IDKKVG-ALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHTC
T ss_pred EEEEEeCCEE-EEEecC-CCCHHHHHHHHHhcC
Confidence 9999988873 334555 689999999999863
No 22
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.81 E-value=2.2e-19 Score=137.54 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=93.2
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..+.+++.++|++.+ .+++++|+||++||++|+.+.|.++++++.+++ .+.|+.||++.+ ++++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 75 (106)
T 3die_A 3 MAIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-KADILKLDVDEN-PSTA-AKYEVMSIP 75 (106)
T ss_dssp CCCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred cceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEECCcC-HHHH-HhCCCcccC
Confidence 468899999999977 689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 3die_A 76 TLIVFKDGQP-VDKVVG-FQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEEeCCeE-EEEEeC-CCCHHHHHHHHHHh
Confidence 9999998873 345555 78999999999875
No 23
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.81 E-value=2.1e-19 Score=137.64 Aligned_cols=102 Identities=24% Similarity=0.393 Sum_probs=91.1
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 251 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
|.++++++|+++++ .+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++||+
T Consensus 2 v~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 75 (105)
T 1nsw_A 2 TMTLTDANFQQAIQ---GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDEN-PETT-SQFGIMSIPTL 75 (105)
T ss_dssp CEEECTTTHHHHHS---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceeccHHhHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCC-HHHH-HHcCCccccEE
Confidence 67899999997775 789999999999999999999999999999987 799999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 76 ILFKGGRP-VKQLIG-YQPKEQLEAQLADV 103 (105)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHTTTT
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHHH
Confidence 99988873 334555 78899999999865
No 24
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=3.2e-19 Score=141.47 Aligned_cols=102 Identities=19% Similarity=0.441 Sum_probs=91.4
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.|.+|+.++|+++++ + .++|+|||+||++|+.+.|.++++++.+++.++.|+.||++.+ .+++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~f~~~~~----~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~P 79 (126)
T 1x5e_A 7 GNVRVITDENWRELLE----G-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ-PGLS-GRFIINALP 79 (126)
T ss_dssp CSEEECCTTTHHHHTS----S-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccEEecHHHHHHHhC----C-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC-HHHH-HHcCCcccC
Confidence 5689999999998764 2 3999999999999999999999999999754699999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+ ...+.| ..+.++|.+||+++
T Consensus 80 t~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 80 TIYHCKDGE--FRRYQG-PRTKKDFINFISDK 108 (126)
T ss_dssp EEEEEETTE--EEECCS-CCCHHHHHHHHHTC
T ss_pred EEEEEeCCe--EEEeec-CCCHHHHHHHHHHH
Confidence 999998887 567776 78999999999864
No 25
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.5e-19 Score=143.26 Aligned_cols=105 Identities=26% Similarity=0.566 Sum_probs=93.7
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhc----CCCeEEEEEEcCCCchHHHHHcCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA----GNGVKVGKFRADGDQKEYAKQKLQL 324 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~----~~~v~~~~vd~~~~~~~l~~~~~~v 324 (361)
..|..++.++|++.+. +.++++||+||++||++|+.+.|.++++++.++ + ++.|+.||++.+ .+++ ++|+|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v 81 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVL--DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVN-QVLA-SRYGI 81 (133)
T ss_dssp CSCEECCTTHHHHHTT--TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTC-CHHH-HHHTC
T ss_pred CcCEEcCHhhHHHHHh--cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCC-HHHH-HhCCC
Confidence 5689999999998763 368899999999999999999999999999997 5 799999999999 9999 99999
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 82 ~~~Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 82 RGFPTIKIFQKGES-PVDYDG-GRTRSDIVSRALDL 115 (133)
T ss_dssp CSSSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred CeeCeEEEEeCCCc-eEEecC-CCCHHHHHHHHHHH
Confidence 99999999999773 556666 78999999999864
No 26
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.80 E-value=2.3e-19 Score=139.34 Aligned_cols=102 Identities=20% Similarity=0.300 Sum_probs=91.7
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
.|.+++.++|++.+ .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 74 (112)
T 2voc_A 2 AIVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN-QETA-GKYGVMSIPT 74 (112)
T ss_dssp CCEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC-CSHH-HHTTCCSBSE
T ss_pred CeEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCCcccE
Confidence 36789999999977 689999999999999999999999999999987 799999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| ..+.++|.+||++.
T Consensus 75 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 75 LLVLKDGEV-VETSVG-FKPKEALQELVNKH 103 (112)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999988873 344555 78999999999865
No 27
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.80 E-value=1.9e-19 Score=145.77 Aligned_cols=106 Identities=19% Similarity=0.332 Sum_probs=93.7
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
...|.++++++|++.+. +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ .+++ ++|+|.++
T Consensus 5 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVE--DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN-PWTA-EKYGVQGT 79 (140)
T ss_dssp TTTEEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC-HHHH-HHHTCCEE
T ss_pred CcceEEcchHhHHHHHH--hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC-HhHH-HHCCCCcC
Confidence 45789999999995432 3799999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 80 PTFKFFCHGRP-VWEQVG-QIYPSILKNAVRDM 110 (140)
T ss_dssp SEEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred CEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999998874 445655 78999999999865
No 28
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.80 E-value=1.8e-19 Score=140.94 Aligned_cols=104 Identities=18% Similarity=0.281 Sum_probs=90.9
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..+...+.++|++++. ...+++++|+|||+||++|+.+.|.++++++.+++ +.|+.||++.+ .+++ ++|+|.++|
T Consensus 12 ~~~~~~t~~~f~~~l~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~-~~l~-~~~~v~~~P 86 (116)
T 3qfa_C 12 SVKQIESKTAFQEALD-AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SECEVKSMP 86 (116)
T ss_dssp CCBCCCCHHHHHHHHH-HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred cccCCCCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCcccc
Confidence 3456678899999875 22689999999999999999999999999999875 99999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 87 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 87 TFQFFKKGQK-VGEFSG-A-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESSSSE-EEEEES-C-CHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEEcC-C-CHHHHHHHHHHh
Confidence 9999988874 444555 5 999999999876
No 29
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.80 E-value=3.8e-19 Score=136.75 Aligned_cols=103 Identities=17% Similarity=0.326 Sum_probs=92.7
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
.|.+++.++|+++++ .+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG---QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDEN-PKTA-MRYRVMSIPT 75 (109)
T ss_dssp CCEECCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred cceEccHhHHHHHhc---CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCC-HhHH-HhCCCCcCCE
Confidence 578999999998776 789999999999999999999999999999987 799999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 76 VILFKDGQP-VEVLVG-AQPKRNYQAKIEKH 104 (109)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCcE-eeeEeC-CCCHHHHHHHHHHH
Confidence 999988873 334555 68999999999875
No 30
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.80 E-value=3.5e-19 Score=146.79 Aligned_cols=104 Identities=23% Similarity=0.464 Sum_probs=93.4
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..+.+++.++|++.+. .+++++|+||++||++|+.+.|.|+++++.+++ ++.|++||++.+ ++++ ++|+|.++|
T Consensus 47 ~~~~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~-~~l~-~~~~i~~~P 120 (155)
T 2ppt_A 47 GKVAGIDPAILARAER---DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH-PAVA-GRHRIQGIP 120 (155)
T ss_dssp SSEEECCHHHHHHHTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS-THHH-HHTTCCSSS
T ss_pred CCCccCCHHHHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc-HHHH-HHcCCCcCC
Confidence 4688999999999874 789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 121 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 121 AFILFHKGRE-LARAAG-ARPASELVGFVRGK 150 (155)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999998874 334555 78999999999875
No 31
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.80 E-value=5.8e-19 Score=144.14 Aligned_cols=105 Identities=17% Similarity=0.401 Sum_probs=94.9
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
...+..++.++|++++. .+++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ .+++ ++|+|.++
T Consensus 37 ~~~v~~l~~~~~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~~ 110 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAE-PALS-TRFRIRSI 110 (148)
T ss_dssp CCCCEECCTTTHHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cCCceecCHHHHHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCC-HHHH-HHCCCCcc
Confidence 34689999999999885 899999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 111 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 111 PTIMLYRNGKM-IDMLNG-AVPKAPFDNWLDEQ 141 (148)
T ss_dssp SEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE-EEEEeC-CCCHHHHHHHHHHH
Confidence 99999998874 345665 79999999999875
No 32
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.80 E-value=3.8e-19 Score=139.73 Aligned_cols=107 Identities=21% Similarity=0.372 Sum_probs=93.9
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 247 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 247 ~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
.++.+..+++++|++.+. +++++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 11 ~~~~~~~~~~~~f~~~v~--~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~ 85 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVV--NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDH-TDLA-IEYEVSA 85 (119)
T ss_dssp CCSEEECCSHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTT-HHHH-HHTTCCS
T ss_pred CceEEEecChhhHHHHHH--cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCC-HHHH-HHcCCCc
Confidence 345789999999998653 3688999999999999999999999999999987 799999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 86 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 86 VPTVLAMKNGDV-VDKFVG-IKDEDQLEAFLKKL 117 (119)
T ss_dssp SSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred ccEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 999999988873 334555 68999999999875
No 33
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.80 E-value=4.3e-19 Score=137.11 Aligned_cols=104 Identities=24% Similarity=0.513 Sum_probs=93.0
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
+.|..+++++|++.+. +++++|+||++||++|+.+.|.++++++.+.. .++.|+.||++.+ .+++ ++|+|.+
T Consensus 5 ~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v~~ 78 (111)
T 3uvt_A 5 STVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE-RNIC-SKYSVRG 78 (111)
T ss_dssp CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc-HhHH-HhcCCCc
Confidence 5689999999999885 77999999999999999999999999998763 2699999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| ..+.++|.+||++.
T Consensus 79 ~Pt~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 79 YPTLLLFRGGKK-VSEHSG-GRDLDSLHRFVLSQ 110 (111)
T ss_dssp SSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred ccEEEEEeCCcE-EEeccC-CcCHHHHHHHHHhc
Confidence 999999998874 446666 68999999999874
No 34
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.80 E-value=4.6e-19 Score=137.03 Aligned_cols=101 Identities=17% Similarity=0.278 Sum_probs=88.9
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
.....+.++|++++. ++++++|+||++||++|+.+.|.++++++.+++ +.|+.||++.+ .+++ ++|+|.++||
T Consensus 8 ~~~~~~~~~f~~~~~---~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~-~~l~-~~~~v~~~Pt 80 (109)
T 3f3q_A 8 VTQFKTASEFDSAIA---QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDEL-GDVA-QKNEVSAMPT 80 (109)
T ss_dssp CEECCSHHHHHHHTT---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ccCCCCHHHHHHHHh---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCCccCE
Confidence 345567889999886 799999999999999999999999999999965 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| . +.++|.++|+++
T Consensus 81 ~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 81 LLLFKNGKE-VAKVVG-A-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEEECCEE-EEEEeC-C-CHHHHHHHHHhh
Confidence 999998873 444555 3 789999999886
No 35
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.80 E-value=5.9e-19 Score=142.04 Aligned_cols=106 Identities=22% Similarity=0.359 Sum_probs=93.2
Q ss_pred CCceecCcccHHHHHhhc---------CCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH
Q 018045 249 QNLVTLNRTGMENLARLD---------HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK 319 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~---------~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~ 319 (361)
..|.+|++++|++.+... +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ .+++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~- 85 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKE-QELA- 85 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCC-HHHH-
Confidence 468899999999877522 1468999999999999999999999999999987 799999999999 9999
Q ss_pred HcCCCCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 320 QKLQLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|+|.++||+++| ++|+ .+.+.| ..+.++|.++|+++
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGK--PEMAQG-AMPKASFKKAIDEF 124 (136)
T ss_dssp HHTTCCSSCEEEEECSSSC--CEEEES-CCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCCc--EEEEeC-CCCHHHHHHHHHHH
Confidence 99999999999999 6776 446666 68999999999875
No 36
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.80 E-value=6.7e-19 Score=136.48 Aligned_cols=105 Identities=17% Similarity=0.309 Sum_probs=92.3
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..|..++.++|++.+. +++++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 79 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVL--KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN-PGTA-AKYGVMSIP 79 (112)
T ss_dssp CCCEEECTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ceEEecchhhHHHHHh--hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC-HHHH-HhCCCCccc
Confidence 4688999999987553 3689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 80 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 80 TLNVYQGGEV-AKTIVG-AKPKAAIVRDLEDF 109 (112)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHTHHH
T ss_pred EEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999998873 344555 78899999999875
No 37
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.80 E-value=5.8e-19 Score=135.58 Aligned_cols=104 Identities=21% Similarity=0.338 Sum_probs=91.9
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
.|..+++++|++.+. +++++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (107)
T 1dby_A 2 EAGAVNDDTFKNVVL--ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDES-PNVA-SEYGIRSIPT 76 (107)
T ss_dssp CCEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHHTCCSSCE
T ss_pred ccEeccHHHHHHHHh--cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCC-HHHH-HHCCCCcCCE
Confidence 478899999998653 3689999999999999999999999999999987 799999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 77 IMVFKGGKK-CETIIG-AVPKATIVQTVEKY 105 (107)
T ss_dssp EEEESSSSE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999988873 334555 68899999999876
No 38
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.80 E-value=3.4e-19 Score=142.00 Aligned_cols=106 Identities=23% Similarity=0.362 Sum_probs=93.2
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
+..|.+++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++
T Consensus 21 ~~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 95 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGI 95 (128)
T ss_dssp CCCSEEECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC-CTTS-GGGTCCSS
T ss_pred ccccEecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCcc
Confidence 35689999999997552 4789999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 96 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 96 PTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 126 (128)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEEEeCCEE-EEEEcC-CCCHHHHHHHHHHh
Confidence 99999988873 334555 68999999999875
No 39
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.79 E-value=7.1e-19 Score=136.39 Aligned_cols=105 Identities=11% Similarity=0.299 Sum_probs=86.6
Q ss_pred ceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
|.++++ ++|++++.....+++++|+||++||++|+.+.|.++++++.++..++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~~Pt 79 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN-SEIS-ELFEISAVPY 79 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC-HHHH-HHcCCCcccE
Confidence 677887 999998862234899999999999999999999999999996433699999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| . +.++|.++|+++
T Consensus 80 ~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 80 FIIIHKGTI-LKELSG-A-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEETTEE-EEEECS-C-CHHHHHHHHHHH
T ss_pred EEEEECCEE-EEEecC-C-CHHHHHHHHHHH
Confidence 999998873 344555 3 566799999865
No 40
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.79 E-value=1.1e-18 Score=135.77 Aligned_cols=105 Identities=21% Similarity=0.348 Sum_probs=93.1
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.|.+++.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~P 81 (115)
T 1thx_A 7 KGVITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPN-PTTV-KKYKVEGVP 81 (115)
T ss_dssp CSEEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTC-HHHH-HHTTCCSSS
T ss_pred CceEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCC-HHHH-HHcCCCcee
Confidence 4689999999998652 4789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 82 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 82 ALRLVKGEQI-LDSTEG-VISKDKLLSFLDTH 111 (115)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEcCCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999988873 334555 68999999999875
No 41
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.79 E-value=9.5e-20 Score=139.83 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=74.9
Q ss_pred CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEe
Q 018045 255 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 334 (361)
Q Consensus 255 ~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~ 334 (361)
+.++|++.++ ++++++|+|||+||++|+.+.|.++++++.++ ++.|+.||++.+ ++++ ++|+|.++||+++|+
T Consensus 7 ~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~-~~l~-~~~~v~~~Pt~~~~~ 79 (105)
T 4euy_A 7 TIEELATYIE---EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDM-QEIA-GRYAVFTGPTVLLFY 79 (105)
T ss_dssp ---CCSSSTT---CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC-----------CCCCEEEEEE
T ss_pred CHHHHHHHHh---cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCC-HHHH-HhcCCCCCCEEEEEe
Confidence 4566777664 78999999999999999999999999999984 599999999999 9999 999999999999999
Q ss_pred CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 335 KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 335 ~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|+. ...+.| ..+.++|.++|+++
T Consensus 80 ~G~~-~~~~~g-~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGKE-ILRESR-FISLENLERTIQLF 103 (105)
T ss_dssp TTEE-EEEEES-SCCHHHHHHHHHTT
T ss_pred CCeE-EEEEeC-CcCHHHHHHHHHHh
Confidence 8873 344455 78999999999875
No 42
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.79 E-value=9.3e-19 Score=135.55 Aligned_cols=105 Identities=19% Similarity=0.346 Sum_probs=90.5
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-CCchHHHHHcCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGS 326 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-~~~~~l~~~~~~v~~ 326 (361)
.+.|..++.++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++ .+ .+++ ++|+|.+
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~-~~~~-~~~~v~~ 78 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRV 78 (111)
T ss_dssp TTSEEEECTTTHHHHHT-TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSB
T ss_pred cCccEEechHHHHHHHH-hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcch-HHHH-HHcCCCe
Confidence 35789999999999885 22588999999999999999999999999999875 999999998 56 8999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||++++++|+. ...+.| . +.++|.++|+++
T Consensus 79 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 79 VPTFKILKENSV-VGEVTG-A-KYDKLLEAIQAA 109 (111)
T ss_dssp SSEEEEESSSSE-EEEEES-S-CHHHHHHHHHHH
T ss_pred eeEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHh
Confidence 999999988873 334555 3 589999999876
No 43
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.79 E-value=1e-18 Score=133.54 Aligned_cols=103 Identities=22% Similarity=0.409 Sum_probs=91.3
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 251 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
|..++.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||+
T Consensus 2 v~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA-PGIA-TQYNIRSIPTV 76 (105)
T ss_dssp CEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch-HHHH-HhCCCCcccEE
Confidence 67899999998664 3688999999999999999999999999999987 799999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 77 LFFKNGER-KESIIG-AVPKSTLTDSIEKY 104 (105)
T ss_dssp EEEETTEE-EEEEEE-CCCHHHHHHHHHHH
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHhh
Confidence 99998873 334455 68999999999886
No 44
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.79 E-value=4.8e-19 Score=139.53 Aligned_cols=106 Identities=22% Similarity=0.446 Sum_probs=91.1
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.|.+++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~P 77 (122)
T 3aps_A 3 QASIDLTPQTFNEKVL--QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAY-PQTC-QKAGIKAYP 77 (122)
T ss_dssp CCSEECCHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred cchhcCCHHHHHHHHh--cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCC-HHHH-HHcCCCccc
Confidence 4688999999965432 3789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| +..+.++|.++|+++
T Consensus 78 t~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 78 SVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp EEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHH
T ss_pred eEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHH
Confidence 9999977764 334444 237999999999864
No 45
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.79 E-value=1.4e-18 Score=133.59 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=86.7
Q ss_pred ceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
|.++ +.++|++.+.. .++++++|+||++||++|+.+.|.++++++.++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 3 v~~i~~~~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~-~~~~-~~~~v~~~Pt 77 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQC-QGTA-ATNNISATPT 77 (107)
T ss_dssp EEEECSGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSSSE
T ss_pred eEEecCHHHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HhcCCCcccE
Confidence 5566 56889998841 368999999999999999999999999999994 599999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 78 FQFFRNKVR-IDQYQG--ADAVGLEEKIKQH 105 (107)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEECCeE-EEEEeC--CCHHHHHHHHHHh
Confidence 999998873 334555 4566799999875
No 46
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.79 E-value=1e-18 Score=133.03 Aligned_cols=101 Identities=21% Similarity=0.392 Sum_probs=90.6
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 251 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
|.+++.++|++.+. ++++++|.||++||++|+.+.|.++++++.+++ +.|+.||++.+ .+++ ++|+|.++||+
T Consensus 1 V~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 73 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA---SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDEN-PDIA-ARYGVMSLPTV 73 (104)
T ss_dssp CEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSCEE
T ss_pred CeecCHHHHHHHHh---cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCC-HHHH-HhCCccccCEE
Confidence 56899999999886 789999999999999999999999999999976 99999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 74 ~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 74 IFFKDGEP-VDEIIG-AVPREEIEIRIKNL 101 (104)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEECCeE-hhhccC-CCCHHHHHHHHHHH
Confidence 99988873 334555 68999999999875
No 47
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.78 E-value=8.7e-19 Score=135.75 Aligned_cols=106 Identities=18% Similarity=0.312 Sum_probs=90.7
Q ss_pred CCceec-CcccHHHHHhh-cCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTL-NRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~-~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
+.|..+ +.++|++.+.. ...+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~ 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAV-AAVA-EAAGITA 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTT-HHHH-HHHTCCB
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCch-HHHH-HHcCCCc
Confidence 357778 56889998862 11289999999999999999999999999999986 799999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 79 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 79 MPTFHVYKDGVK-ADDLVG-A-SQDKLKALVAKH 109 (112)
T ss_dssp SSEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred ccEEEEEECCeE-EEEEcC-C-CHHHHHHHHHHH
Confidence 999999998874 344555 5 899999999875
No 48
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=2.1e-19 Score=143.90 Aligned_cols=109 Identities=28% Similarity=0.579 Sum_probs=94.9
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
...|..|+.++|++.+. +++++++|+||++||++|+.+.|.|+++++.+++ .++.|+.||++.+ ..++ ++|+|.+
T Consensus 6 ~~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~ 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN-DITN-DQYKVEG 81 (133)
T ss_dssp SCSSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS-CCCC-SSCCCSS
T ss_pred CCceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC-HHHH-hhcCCCc
Confidence 35789999999988764 3589999999999999999999999999999974 2799999999999 8888 8999999
Q ss_pred CCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~-~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+.. .+.+.||..+.++|.+||+++
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHH
T ss_pred CCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHh
Confidence 9999999887653 456776578999999999875
No 49
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.78 E-value=6.7e-19 Score=137.78 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=85.0
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.|.+++.++|.+.+...+.+++++|+|||+||++|+.|.|.++++++++.+ +.|++||+++. + ++|+|.++|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~----~-~~~~v~~~P 75 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSC----I-QHYHDNCLP 75 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGT----S-TTCCGGGCS
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHh----H-HHCCCCCCC
Confidence 3588899999998765222344999999999999999999999999999964 99999999976 4 789999999
Q ss_pred eEEEEeCCCCCeeecCC------CCCCHHHHHHHHHH
Q 018045 329 TILFFPKHSSKPIKYPS------ERRDVDSLMAFVDA 359 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~------~~~~~~~l~~~i~~ 359 (361)
|+++|++|+.. ..+.| ...+.++|..+|.+
T Consensus 76 T~~~fk~G~~v-~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 76 TIFVYKNGQIE-AKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEEEEETTEEE-EEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EEEEEECCEEE-EEEeChhhhCCCCCCHHHHHHHHHH
Confidence 99999999852 22222 24689999999975
No 50
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.78 E-value=1.3e-18 Score=153.66 Aligned_cols=107 Identities=23% Similarity=0.523 Sum_probs=96.9
Q ss_pred cCCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCC--CeEEEEEEcCCCchHHHHHcCC
Q 018045 246 FNSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQ 323 (361)
Q Consensus 246 ~~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~--~v~~~~vd~~~~~~~l~~~~~~ 323 (361)
..++.|..|++++|++++. ++++++|+|||+||++|+.+.|.|+++++.+++. ++.|+.||++.+ .+++ ++|+
T Consensus 12 ~~~~~v~~l~~~~~~~~~~---~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~ 86 (241)
T 3idv_A 12 KEENGVLVLNDANFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA-SVLA-SRFD 86 (241)
T ss_dssp EEETTEEEECTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTT
T ss_pred ccCCCcEEecccCHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC-HHHH-HhcC
Confidence 3446799999999999886 7899999999999999999999999999999872 399999999999 9999 9999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 324 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|.++||+++|++|+ .+.+.| .++.++|.+|++++
T Consensus 87 v~~~Pt~~~~~~g~--~~~~~g-~~~~~~l~~~i~~~ 120 (241)
T 3idv_A 87 VSGYPTIKILKKGQ--AVDYEG-SRTQEEIVAKVREV 120 (241)
T ss_dssp CCSSSEEEEEETTE--EEECCS-CSCHHHHHHHHHHH
T ss_pred CCcCCEEEEEcCCC--cccccC-cccHHHHHHHHhhc
Confidence 99999999999888 567877 79999999999864
No 51
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.78 E-value=4.1e-19 Score=139.09 Aligned_cols=106 Identities=25% Similarity=0.590 Sum_probs=94.9
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
+.|.+++.++|++++. ++++++|.||++||++|+.+.|.++++++.+++ .++.|+.||++.+ .+++ ++|+|.+
T Consensus 7 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~ 81 (120)
T 1mek_A 7 DHVLVLRKSNFAEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE-SDLA-QQYGVRG 81 (120)
T ss_dssp TTEEECCTTTHHHHHH---HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC-CSSH-HHHTCCS
T ss_pred CCcEEechhhHHHHHc---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC-HHHH-HHCCCCc
Confidence 5789999999999886 789999999999999999999999999999874 3699999999999 8999 9999999
Q ss_pred CCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~-~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+.. ...+.| ..+.++|.+||+++
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g-~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 82 YPTIKFFRNGDTASPKEYTA-GREADDIVNWLKKR 115 (120)
T ss_dssp SSEEEEEESSCSSSCEECCC-CSSHHHHHHHHHTT
T ss_pred ccEEEEEeCCCcCCcccccC-ccCHHHHHHHHHhc
Confidence 9999999988752 256776 78999999999875
No 52
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.78 E-value=1.4e-18 Score=134.88 Aligned_cols=102 Identities=18% Similarity=0.298 Sum_probs=91.0
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+....++.++|+++++ .+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++.+ .+++ ++|+|.++|
T Consensus 9 ~~~~~~~~~~f~~~~~---~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~-~~~~-~~~~v~~~P 81 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS---QNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEV-SEVT-EKENITSMP 81 (112)
T ss_dssp CCEEECSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred eEEEECCHHHHHHHHc---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCC-HHHH-HHcCCCccc
Confidence 4567789999999887 789999999999999999999999999999864 99999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 82 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 82 TFKVYKNGSS-VDTLLG-A-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEEETTEE-EEEEES-C-CHHHHHHHHHTT
T ss_pred EEEEEECCcE-EEEEeC-C-CHHHHHHHHHHh
Confidence 9999998873 334555 5 999999999875
No 53
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.78 E-value=1.5e-18 Score=136.43 Aligned_cols=105 Identities=20% Similarity=0.371 Sum_probs=92.4
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..|..++.++|++.+. +.+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 12 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~P 86 (121)
T 2i1u_A 12 SATIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN-PETA-RNFQVVSIP 86 (121)
T ss_dssp CCSEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ccceecCHHHHHHHHH--hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhcCCCcCC
Confidence 5689999999987543 3688999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 87 t~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 87 TLILFKDGQP-VKRIVG-AKGKAALLRELSDV 116 (121)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHTCSC
T ss_pred EEEEEECCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999998873 344555 78899999998764
No 54
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.77 E-value=1.5e-18 Score=157.51 Aligned_cols=107 Identities=18% Similarity=0.372 Sum_probs=94.7
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
.+.|.++|.++|++++. .+.+++|+|+||++||++|+.+.|.++++++.+++ ++.|++||++.+ ++++ ++|+|.++
T Consensus 6 ~~~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE-QMIA-AQFGLRAI 81 (287)
T ss_dssp CTTEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC-HHHH-HTTTCCSS
T ss_pred CCccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC-HHHH-HHcCCCCC
Confidence 45799999999999775 23489999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..+.+.+.++|+.+
T Consensus 82 Pt~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 82 PTVYLFQNGQP-VDGFQG-PQPEEAIRALLDXV 112 (287)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CeEEEEECCEE-EEEeeC-CCCHHHHHHHHHHH
Confidence 99999998873 334555 78999999999764
No 55
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.77 E-value=3.1e-18 Score=135.33 Aligned_cols=106 Identities=21% Similarity=0.393 Sum_probs=91.0
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-CCchHHHHHcCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGS 326 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-~~~~~l~~~~~~v~~ 326 (361)
.+.|..++.++|++.+. ...+++++|.||++||++|+.+.|.++++++.+++ +.|+.||++ .+ .+++ ++|+|.+
T Consensus 17 ~~~v~~l~~~~~~~~~~-~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~-~~~~-~~~~v~~ 91 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRV 91 (124)
T ss_dssp TTSEEEECTTTHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSS
T ss_pred CCceEEecchhHHHHHH-hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcch-HHHH-HHcCCCe
Confidence 35689999999998875 23688999999999999999999999999999875 999999998 56 8999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 361 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~~ 361 (361)
+||++++++|+. ...+.| . ..++|.++|++++
T Consensus 92 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~~ 123 (124)
T 1faa_A 92 VPTFKILKENSV-VGEVTG-A-KYDKLLEAIQAAR 123 (124)
T ss_dssp SSEEEEEETTEE-EEEEES-S-CHHHHHHHHHHHT
T ss_pred eeEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHhh
Confidence 999999998873 334455 3 4899999999864
No 56
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.77 E-value=1.7e-18 Score=141.66 Aligned_cols=103 Identities=9% Similarity=0.208 Sum_probs=87.1
Q ss_pred cCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEE
Q 018045 254 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF 333 (361)
Q Consensus 254 l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~ 333 (361)
.+.++|++.+. ..+++++||+|||+||++|+.+.|.++++++.+++ .+.|+.||++.+ ++++ ++|+|.++||+++|
T Consensus 9 ~~~~~~~~~i~-~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-~~~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~ 84 (149)
T 3gix_A 9 TSKKEVDQAIK-STAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-MAAIYLVDVDQT-AVYT-QYFDISYIPSTVFF 84 (149)
T ss_dssp CSHHHHHHHHH-HCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-TEEEEEEETTTC-CHHH-HHTTCCSSSEEEEE
T ss_pred CCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCcC-HHHH-HHcCCCccCeEEEE
Confidence 36678988773 23689999999999999999999999999999977 699999999999 9999 99999999999999
Q ss_pred eCCCCCe--------eecCCCCCCHHHHHHHHHHh
Q 018045 334 PKHSSKP--------IKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 334 ~~g~~~~--------~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|+... ..+.|...+.++|.++|+++
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp ETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred ECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9998320 13333267899999999865
No 57
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.77 E-value=3.3e-18 Score=133.74 Aligned_cols=102 Identities=20% Similarity=0.394 Sum_probs=88.8
Q ss_pred CceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 250 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 250 ~v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
++.++++ ++|++.+. ...+++++|+||++||++|+.+.|.++++++.+ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 14 ~v~~l~~~~~~~~~l~-~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~-~~~~-~~~~v~~~P 87 (117)
T 2xc2_A 14 ELIELKQDGDLESLLE-QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKL-EETA-RKYNISAMP 87 (117)
T ss_dssp EEEECCSTTHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTS-HHHH-HHTTCCSSS
T ss_pred eeEEeCCHHHHHHHHH-hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCcc-HHHH-HHcCCCccc
Confidence 4888988 89998876 236889999999999999999999999999887 499999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| .+.++|.++|+++
T Consensus 88 t~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 88 TFIAIKNGEK-VGDVVG--ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred eEEEEeCCcE-EEEEeC--CCHHHHHHHHHHh
Confidence 9999998873 334444 5889999999876
No 58
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.77 E-value=3.5e-18 Score=130.79 Aligned_cols=103 Identities=18% Similarity=0.363 Sum_probs=89.5
Q ss_pred ceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
|.++++ ++|++.+. ..++++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++||
T Consensus 2 v~~l~~~~~~~~~l~-~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLT-KASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDEC-EDIA-MEYNISSMPT 77 (106)
T ss_dssp EEECCSHHHHHHHHH-HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ceecCCHHHHHHHHH-hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccch-HHHH-HHcCCCcccE
Confidence 567877 88988775 23688999999999999999999999999999975 799999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~g--~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 FVFLKNGVK-VEEFAG--ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHT
T ss_pred EEEEcCCcE-EEEEcC--CCHHHHHHHHHHh
Confidence 999998873 334444 6889999999876
No 59
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=4.3e-18 Score=147.42 Aligned_cols=105 Identities=24% Similarity=0.554 Sum_probs=95.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
...+..++.++|+..+. .++++||+|||+||++|+.+.|.|+++++.+++ .+.|+.||++.+ .+++ ++|+|.++
T Consensus 96 ~~~v~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 169 (210)
T 3apq_A 96 DPEIITLERREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSY 169 (210)
T ss_dssp CTTSEECCHHHHHHHHH---HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCceEEecHHHHHHHHc---cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc-HHHH-HHcCCCcC
Confidence 35689999999999886 789999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 170 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 200 (210)
T 3apq_A 170 PSLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 200 (210)
T ss_dssp SEEEEECTTSC-CEECCS-CCCHHHHHHHHHHH
T ss_pred CeEEEEECCCc-eeEecC-CCCHHHHHHHHHHh
Confidence 99999988875 556666 78999999999864
No 60
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.77 E-value=4.6e-18 Score=129.99 Aligned_cols=101 Identities=20% Similarity=0.358 Sum_probs=87.3
Q ss_pred eec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 252 VTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 252 ~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
.++ +.++|++.+. ..++++++|.||++||++|+.+.|.++++++.+++ +.|+.||++.+ ++++ ++|+|.++||+
T Consensus 3 ~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~Pt~ 77 (105)
T 3m9j_A 3 KQIESKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SESEVKSMPTF 77 (105)
T ss_dssp EECCSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTC-HHHH-HHTTCCBSSEE
T ss_pred EEcCCHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhh-HHHH-HHcCCCcCcEE
Confidence 445 5677888775 23589999999999999999999999999999975 99999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|++|+. ...+.| . +.++|.++|+++
T Consensus 78 ~~~~~g~~-~~~~~g-~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 78 QFFKKGQK-VGEFSG-A-NKEKLEATINEL 104 (105)
T ss_dssp EEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEECCeE-EEEEeC-C-CHHHHHHHHHHh
Confidence 99988873 344555 5 999999999876
No 61
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.76 E-value=1.7e-18 Score=136.05 Aligned_cols=105 Identities=25% Similarity=0.552 Sum_probs=90.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC----CCeEEEEEEcCCCchHHHHHcCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKLQ 323 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~~~~l~~~~~~ 323 (361)
+..|..|+.++|++.+. .++++++|+|||+||++|+.+.|.|+++++.+++ .++.|+.||++.+ . ++ + +
T Consensus 6 ~~~v~~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~-~~-~--~ 78 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN-D-VP-D--E 78 (121)
T ss_dssp SCSSEECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS-C-CS-S--C
T ss_pred CCCeEEecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc-c-cc-c--c
Confidence 45789999999998752 3789999999999999999999999999999975 2699999999988 4 66 4 9
Q ss_pred CCCCCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 018045 324 LGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~~~Pt~~~~~~g~~~-~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|.++||+++|++|+.. ...+.| ..+.++|.+||+++
T Consensus 79 v~~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 IQGFPTIKLYPAGAKGQPVTYSG-SRTVEDLIKFIAEN 115 (121)
T ss_dssp CSSSSEEEEECSSCTTSCCCCCC-CSCHHHHHHHHHHT
T ss_pred cCcCCeEEEEeCcCCCCceEecC-CCCHHHHHHHHHhc
Confidence 9999999999888653 556666 78999999999875
No 62
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.76 E-value=6.2e-19 Score=139.46 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=86.8
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCCh--------------hHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ--------------FCQAMEGSYVELADKLAGNGVKVGKFRADGDQ 314 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~--------------~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~ 314 (361)
+.|.+++.++|++.+. +++++++|+|||+||+ +|+.+.|.++++++.+++ ++.|+.||++.+
T Consensus 3 ~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~- 78 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN- 78 (123)
T ss_dssp CSCEECCSTTHHHHTT--SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC-
T ss_pred CccEecChhhHHHHHH--hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC-
Confidence 4688999999987542 4789999999999999 999999999999999987 799999999999
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.+++ ++|+|.++||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 79 ~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 79 PGTA-PKYGIRGIPTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 121 (123)
T ss_dssp TTTG-GGGTCCBSSEEEEEESSSE-EEEEES-CCCHHHHHHHHTTT
T ss_pred HHHH-HHcCCCccCEEEEEECCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999 9999999999999988873 334555 68999999999875
No 63
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.76 E-value=1.4e-18 Score=138.22 Aligned_cols=87 Identities=18% Similarity=0.369 Sum_probs=79.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSER 347 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~ 347 (361)
++++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++||+++|++|+. ...+.| .
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G-~ 115 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKN-ESLA-RKFSVKSLPTIILLKNKTM-LARKDH-F 115 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGC-HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-C
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCCcCEEEEEECCEE-EEEecC-C
Confidence 789999999999999999999999999999986 799999999999 9999 9999999999999988873 444555 7
Q ss_pred CCHHHHHHHHHH
Q 018045 348 RDVDSLMAFVDA 359 (361)
Q Consensus 348 ~~~~~l~~~i~~ 359 (361)
.+.++|.++|++
T Consensus 116 ~~~~~l~~~l~~ 127 (128)
T 3ul3_B 116 VSSNDLIALIKK 127 (128)
T ss_dssp CCHHHHHHHHTT
T ss_pred CCHHHHHHHHHh
Confidence 999999999976
No 64
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.76 E-value=6.2e-18 Score=154.17 Aligned_cols=107 Identities=22% Similarity=0.483 Sum_probs=95.6
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCchHHHHHcCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLG 325 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~v~ 325 (361)
...|++|+.++|++++. +.+++++|+|||+||++|+.+.|.|+++++.+++ .+.|+.|||+ .+ .++| ++|+|.
T Consensus 16 ~~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~~-~~l~-~~~~I~ 90 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNKN-KALC-AKYDVN 90 (298)
T ss_dssp CTTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTTT-HHHH-HHTTCC
T ss_pred CCCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCccC-HHHH-HhCCCC
Confidence 45799999999999884 3688999999999999999999999999999987 7999999998 56 8999 999999
Q ss_pred CCCeEEEEeCCCC----------------CeeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFPKHSS----------------KPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~~g~~----------------~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++||+++|++|+. ....|.| .++.+.|.+||.+.
T Consensus 91 ~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G-~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 91 GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSG-ARTLAPIVDFSLSR 140 (298)
T ss_dssp BSSEEEEEECCCC-------------CCCEEEECCS-CCSHHHHHHHHHTT
T ss_pred ccceEEEEECCceeecccccccccccccccceeecC-CcCHHHHHHHHHHh
Confidence 9999999999862 2678887 79999999999764
No 65
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.76 E-value=4.3e-18 Score=159.94 Aligned_cols=108 Identities=19% Similarity=0.224 Sum_probs=95.3
Q ss_pred ccCCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhH------HHHHHHHHHhcCCCeEEEEEEcCCCchHHH
Q 018045 245 IFNSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAME------GSYVELADKLAGNGVKVGKFRADGDQKEYA 318 (361)
Q Consensus 245 ~~~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~------p~~~~la~~~~~~~v~~~~vd~~~~~~~l~ 318 (361)
.-..+.|.+|+.++|+++++ ++++++|.||||||++|+... |.++++++.+++.++.|++|||+.+ +++|
T Consensus 9 ~~~~~~v~~lt~~~f~~~i~---~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~-~~l~ 84 (367)
T 3us3_A 9 YDGVDRVINVNAKNYKNVFK---KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD-AAVA 84 (367)
T ss_dssp CCCCCCCEECCTTTHHHHHH---HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT-HHHH
T ss_pred CCCCCccEECCHHHHHHHHh---hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc-HHHH
Confidence 33446799999999999987 789999999999999974433 7899999999865699999999999 9999
Q ss_pred HHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 319 KQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 319 ~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|+|+++||+++|++|+ ++.|.| .++.+.|.+||++.
T Consensus 85 -~~~~V~~~PTl~~f~~G~--~~~y~G-~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 85 -KKLGLTEEDSIYVFKEDE--VIEYDG-EFSADTLVEFLLDV 122 (367)
T ss_dssp -HHHTCCSTTEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred -HHcCCCcCceEEEEECCc--EEEeCC-CCCHHHHHHHHHHh
Confidence 999999999999999987 678988 79999999999763
No 66
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.76 E-value=5.5e-18 Score=134.15 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=89.8
Q ss_pred CCceec-CcccHHHHHhhc-CCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
..|.++ +.++|++.+... .++++++|+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~-~~l~-~~~~v~~ 91 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDEL-KSVA-SDWAIQA 91 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HHcCCCc
Confidence 457788 668899887632 258899999999999999999999999999986 499999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 92 ~Pt~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 92 MPTFMFLKEGKI-LDKVVG--AKKDELQSTIAKH 122 (124)
T ss_dssp SSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred cCEEEEEECCEE-EEEEeC--CCHHHHHHHHHHh
Confidence 999999998873 334444 5899999999875
No 67
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.76 E-value=7.5e-18 Score=128.47 Aligned_cols=102 Identities=20% Similarity=0.394 Sum_probs=87.6
Q ss_pred ceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
|.++++ ++|++.+. ...+++++|.||++||++|+.+.|.++++++.++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 1 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (104)
T 2vim_A 1 MRVLATAADLEKLIN-ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQN-EEAA-AKYSVTAMPT 75 (104)
T ss_dssp CEECCSHHHHHHHHH-TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred CeecCCHHHHHHHHH-hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCC-HHHH-HHcCCccccE
Confidence 356766 88988875 2368899999999999999999999999999986 499999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~G--~~~~~l~~~l~~~ 103 (104)
T 2vim_A 76 FVFIKDGKE-VDRFSG--ANETKLRETITRH 103 (104)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEeCCcE-EEEEeC--CCHHHHHHHHHhh
Confidence 999998873 334444 5899999999886
No 68
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.76 E-value=2.7e-18 Score=133.86 Aligned_cols=101 Identities=20% Similarity=0.346 Sum_probs=86.2
Q ss_pred CceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 250 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 250 ~v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
.+.++++ ++|+++++ ++++++|+||++||++|+.+.|.++++++.+++ +.|+.||++.+ .+++ ++|+|.++|
T Consensus 13 ~~~~~~~~~~~~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~P 85 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIK---QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES-PDIA-KECEVTAMP 85 (114)
T ss_dssp GSCBCCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred heeecCCHHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHCCCCccc
Confidence 4555544 56777776 789999999999999999999999999999875 99999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| .. .++|.++|+++
T Consensus 86 t~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 114 (114)
T 2oe3_A 86 TFVLGKDGQL-IGKIIG-AN-PTALEKGIKDL 114 (114)
T ss_dssp EEEEEETTEE-EEEEES-SC-HHHHHHHHHTC
T ss_pred EEEEEeCCeE-EEEEeC-CC-HHHHHHHHHhC
Confidence 9999998873 344555 45 99999999864
No 69
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.76 E-value=8.6e-18 Score=164.55 Aligned_cols=107 Identities=19% Similarity=0.500 Sum_probs=97.6
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
.+.|..|+.++|++++. ++++++|.||||||++|+.+.|.|+++++.+++.++.|++|||+.+ .++| ++|+|.++
T Consensus 13 ~~~v~~l~~~~f~~~~~---~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~ 87 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQ---SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN-QDLC-MEHNIPGF 87 (504)
T ss_dssp TSSCEECCTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCCcEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HhcCCCcC
Confidence 46799999999999886 7899999999999999999999999999999874599999999999 9999 99999999
Q ss_pred CeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~-~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+.. ...|.| .++.+.|.+||++.
T Consensus 88 Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 88 PSLKIFKNSDVNNSIDYEG-PRTAEAIVQFMIKQ 120 (504)
T ss_dssp SEEEEEETTCTTCEEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEeCCccccceeecC-CCCHHHHHHHHHHh
Confidence 999999998743 677887 79999999999864
No 70
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=3.2e-19 Score=143.76 Aligned_cols=104 Identities=16% Similarity=0.424 Sum_probs=86.4
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCC---
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG--- 325 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~--- 325 (361)
..|..++.++|++.+. ...+++++|+|||+||++|+.+.|.|+++++.+++.++.|+.||++.+ ++++ ++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~~ 83 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY-TDVS-TRYKVSTSP 83 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC-HHHH-HHTTCCCCS
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC-HHHH-HHccCcccC
Confidence 4688999999999885 334569999999999999999999999999999754799999999999 9999 999999
Q ss_pred ---CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 018045 326 ---SFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 357 (361)
Q Consensus 326 ---~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i 357 (361)
++||+++|++|+. ...+.| ..+.++|.+||
T Consensus 84 ~~~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l 116 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKE-AMRRPQ-IDKKGRAVSWT 116 (137)
T ss_dssp SSSCSSEEEEESSSSE-EEEESC-BCSSSCBCCCC
T ss_pred CcCCCCEEEEEECCEE-EEEecC-cCchHHHHHHH
Confidence 9999999998874 334444 45555554444
No 71
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.75 E-value=5.2e-18 Score=137.10 Aligned_cols=104 Identities=23% Similarity=0.345 Sum_probs=78.0
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.+.+++.++|++.+. +.++ ++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 33 ~~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 106 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH-PGLA-ARYGVRSVP 106 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC-HHHH-HHCCCCccC
Confidence 4578899999998765 2344 99999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 107 t~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 107 TLVLFRRGAP-VATWVG-ASPRRVLEERLRPY 136 (140)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCcE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999998873 334555 68899999999875
No 72
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.75 E-value=3.2e-18 Score=161.76 Aligned_cols=106 Identities=22% Similarity=0.484 Sum_probs=92.2
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-----CCeEEEEEEcCCCchHHHHHcCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-----NGVKVGKFRADGDQKEYAKQKLQ 323 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-----~~v~~~~vd~~~~~~~l~~~~~~ 323 (361)
+.|..|++++|++++. .+++++|.|||+||++|+.+.|.|+++++.++. .++.|++|||+.+ .++| ++|+
T Consensus 5 ~~v~~l~~~~f~~~~~---~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~-~~l~-~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILN---NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH-SDIA-QRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC-HHHH-HHTT
T ss_pred CceEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc-HHHH-HhcC
Confidence 4588999999999886 789999999999999999999999999999842 2599999999999 9999 9999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 324 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++||+++|++|+.....|.| .++.+.|.+||++.
T Consensus 80 v~~~Pt~~~f~~G~~~~~~~~G-~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMMMKREYRG-QRSVKALADYIRQQ 115 (382)
T ss_dssp CCEESEEEEEETTEEEEEECCS-CCSHHHHHHHHHHH
T ss_pred CCcCCEEEEEeCCcEeeeeecC-cchHHHHHHHHHHh
Confidence 9999999999999842225877 79999999999864
No 73
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.75 E-value=7.4e-18 Score=132.68 Aligned_cols=105 Identities=18% Similarity=0.250 Sum_probs=90.2
Q ss_pred CCceecCcccHHHHHhh-cCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 249 QNLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~-~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
..+..++.++|++.+.. ...+++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++.+ .+++ ++|+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~ 88 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL-KPIA-EQFSVEAM 88 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC-HHHH-HHcCCCcc
Confidence 34677789999998762 12588999999999999999999999999999875 99999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| .. .++|.++|+++
T Consensus 89 Pt~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGDV-KDRVVG-AI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTEE-EEEEES-SC-HHHHHHHHHHH
T ss_pred cEEEEEeCCEE-EEEEeC-cC-HHHHHHHHHHH
Confidence 99999998874 344555 55 99999999875
No 74
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.75 E-value=4e-18 Score=131.92 Aligned_cols=100 Identities=15% Similarity=0.261 Sum_probs=86.6
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 251 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
+..++.++| +.+. ++++++|+||++||++|+.+.|.++++++.++ ++.|+.||++.+ .+++ ++|+|.++||+
T Consensus 5 ~~~~~~~~f-~~~~---~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~Pt~ 76 (110)
T 2l6c_A 5 RDITTEAGM-AHFE---GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR-PELM-KELGFERVPTL 76 (110)
T ss_dssp SBCGGGCSH-HHHT---TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC-HHHH-HHTTCCSSCEE
T ss_pred eecCCHHHH-HHHH---cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC-HHHH-HHcCCcccCEE
Confidence 456788999 5554 67999999999999999999999999998876 499999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|++|+. ...+.| ..+.++|.++|++.
T Consensus 77 ~~~~~G~~-v~~~~G-~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 77 VFIRDGKV-AKVFSG-IMNPRELQALYASI 104 (110)
T ss_dssp EEEESSSE-EEEEES-CCCHHHHHHHHHTC
T ss_pred EEEECCEE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99988883 344555 78999999999864
No 75
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.75 E-value=5.5e-18 Score=148.05 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=93.8
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..+..+|.++|++.+. +++++++|+|||+||++|+.+.|.|+++++.+++ .+.|+.||++.+ .+++ ++|+|.++|
T Consensus 12 ~~~~~lt~~~f~~~v~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~P 86 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 86 (222)
T ss_dssp CCCEECCTTTHHHHHT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-TTTG-GGGTCCSBS
T ss_pred CCceeCCHHHHHHHHH--hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCC-HHHH-HHcCCCcCC
Confidence 5689999999998542 3789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred eEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 87 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 87 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 116 (222)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEECCeE-EEEecc-ccChHHHHHHHHhh
Confidence 9999998874 345555 78999999999875
No 76
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.75 E-value=8.2e-18 Score=138.18 Aligned_cols=104 Identities=27% Similarity=0.424 Sum_probs=88.7
Q ss_pred CCceecC-cccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 249 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 249 ~~v~~l~-~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
..+..++ .++|+++++. ..++++||+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 12 ~~v~~l~~~~~~~~~~~~-~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~ 86 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRL-KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGV-PEVS-EKYEISSV 86 (153)
T ss_dssp CCSEEECSHHHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSS
T ss_pred CCeEEcCCHHHHHHHHHh-cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCC-HHHH-HHcCCCCC
Confidence 4678886 5889988861 138999999999999999999999999999985 599999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G--~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 87 PTFLFFKNSQK-IDRLDG--AHAPELTKKVQRH 116 (153)
T ss_dssp SEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred CEEEEEECCEE-EEEEeC--CCHHHHHHHHHHH
Confidence 99999998773 333444 5788999999875
No 77
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.75 E-value=9.1e-18 Score=136.15 Aligned_cols=101 Identities=13% Similarity=0.186 Sum_probs=84.1
Q ss_pred CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEe
Q 018045 255 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 334 (361)
Q Consensus 255 ~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~ 334 (361)
+.++|++.+. ..++++++|+|||+||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||+++|+
T Consensus 10 ~~~~~~~~v~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~~~-~~~~i~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAIL-SEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV-PDFN-KMYELYDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHH-TCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TSSCSCSSCEEEEEE
T ss_pred CHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC-HHHH-HHcCCCCCCEEEEEE
Confidence 5678887664 12589999999999999999999999999999976 799999999999 9999 999999999999999
Q ss_pred CCCCCee--------ecCCCCC-CHHHHHHHHHHh
Q 018045 335 KHSSKPI--------KYPSERR-DVDSLMAFVDAL 360 (361)
Q Consensus 335 ~g~~~~~--------~~~~~~~-~~~~l~~~i~~~ 360 (361)
+|+.... ...| .. +.++|.++|+++
T Consensus 86 ~G~~v~~~~g~~~~~~~~g-~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINW-AMEDKQEMVDIIETV 119 (142)
T ss_dssp TTEEEEEECC------CCS-CCSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeee-ecCcHHHHHHHHHHH
Confidence 9884322 2333 34 489999998864
No 78
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.74 E-value=5.1e-18 Score=134.53 Aligned_cols=106 Identities=12% Similarity=0.227 Sum_probs=86.5
Q ss_pred CceecCcccHH--HHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEE--cCCCchHHHHHcCCCC
Q 018045 250 NLVTLNRTGME--NLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR--ADGDQKEYAKQKLQLG 325 (361)
Q Consensus 250 ~v~~l~~~~f~--~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd--~~~~~~~l~~~~~~v~ 325 (361)
.+..++.++|+ +.+.....+++++|+||++||++|+.+.|.++++++.+++ ++.|+.|| ++.+ .+++ ++|+|.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~-~~~~-~~~~v~ 81 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKN-IDLA-YKYDAN 81 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHH-HHHH-HHTTCC
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCch-HHHH-HHcCCc
Confidence 35556666665 1111234789999999999999999999999999999975 79999999 8888 9999 999999
Q ss_pred CCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++||+++|+ +|+. ...+.| ..+.++|.++|+++
T Consensus 82 ~~Pt~~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 82 IVPTTVFLDKEGNK-FYVHQG-LMRKNNIETILNSL 115 (126)
T ss_dssp SSSEEEEECTTCCE-EEEEES-CCCHHHHHHHHHHH
T ss_pred ceeEEEEECCCCCE-EEEecC-CCCHHHHHHHHHHH
Confidence 999999998 6763 344555 78999999999875
No 79
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.74 E-value=4.2e-18 Score=134.18 Aligned_cols=106 Identities=18% Similarity=0.348 Sum_probs=91.2
Q ss_pred CCCCceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCC
Q 018045 247 NSQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG 325 (361)
Q Consensus 247 ~~~~v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~ 325 (361)
+...+..+++ ++|++++. .+++++|.||++||++|+.+.|.++++++.+++.++.|+.||++.+ .+++ ++|+|.
T Consensus 13 ~~~~~~~i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~-~~~~-~~~~v~ 87 (121)
T 2j23_A 13 PRGSVQVISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ-SQIA-QEVGIR 87 (121)
T ss_dssp CCCCEEECCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC-HHHH-HHHTCC
T ss_pred CCcceEEcCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC-HHHH-HHcCCC
Confidence 3456777765 88998885 8899999999999999999999999999988763499999999999 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 88 ~~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 88 AMPTFVFFKNGQK-IDTVVG-A-DPSKLQAAITQH 119 (121)
T ss_dssp SSSEEEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred cccEEEEEECCeE-EeeEcC-C-CHHHHHHHHHHh
Confidence 9999999998873 344555 5 899999999876
No 80
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.74 E-value=3e-18 Score=134.30 Aligned_cols=102 Identities=8% Similarity=0.218 Sum_probs=83.6
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc-----hHHHHHcCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-----KEYAKQKLQ 323 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~-----~~l~~~~~~ 323 (361)
..+..++.++|++.+. .+++++|+|||+||++|+.+.|.++++++.++. .+.++ |++... .+++ ++|+
T Consensus 12 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~--~~~~~~~~~~~~~~~-~~~~ 84 (118)
T 1zma_A 12 KDLEVTTVVRAQEALD---KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYFI--NSEEPSQLNDLQAFR-SRYG 84 (118)
T ss_dssp TTSEECCHHHHHHHHH---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEEE--ETTCGGGHHHHHHHH-HHHT
T ss_pred hhhhcCCHHHHHHHHh---CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEEE--ECCCcCcHHHHHHHH-HHcC
Confidence 4678889999999876 788999999999999999999999999998865 45554 444321 5788 8999
Q ss_pred CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 324 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 324 v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
|.++||+++|++|+. ...+.| ..+.++|.+||++
T Consensus 85 i~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~k 118 (118)
T 1zma_A 85 IPTVPGFVHITDGQI-NVRCDS-SMSAQEIKDFAGL 118 (118)
T ss_dssp CCSSCEEEEEETTEE-EEECCT-TCCHHHHHHHHTC
T ss_pred CCCCCeEEEEECCEE-EEEecC-CCCHHHHHHHhhC
Confidence 999999999998874 344555 7899999999864
No 81
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.74 E-value=6.3e-18 Score=157.88 Aligned_cols=104 Identities=13% Similarity=0.183 Sum_probs=95.0
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHH-------HHHHHHHhcCCCeEEEEEEcCCCchHHHHH
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-------YVELADKLAGNGVKVGKFRADGDQKEYAKQ 320 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~-------~~~la~~~~~~~v~~~~vd~~~~~~~l~~~ 320 (361)
.+.|.+|+.++|++.+. ++++++|+||||||+ |+.+.|. |+++++.+++.++.|++|||+.+ .++| +
T Consensus 10 ~~~v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~-~~l~-~ 83 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE-AKLA-K 83 (350)
T ss_dssp CCCCEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT-HHHH-H
T ss_pred CCccEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC-HHHH-H
Confidence 45799999999999886 789999999999999 9999998 99999999864699999999999 9999 9
Q ss_pred cCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 321 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 321 ~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|+|+++||+++|++|+ ...|.| .++.+.|.+||++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~--~~~~~G-~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGDR--TIEFDG-EFAADVLVEFLLDL 120 (350)
T ss_dssp HHTCCSTTEEEEEETTE--EEEECS-CCCHHHHHHHHHTT
T ss_pred hcCCCccceEEEEECCc--EEEecC-CCCHHHHHHHHHHh
Confidence 99999999999999998 678887 69999999999864
No 82
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.74 E-value=4e-17 Score=144.60 Aligned_cols=107 Identities=19% Similarity=0.431 Sum_probs=91.3
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEc--CCCchHHHHHcCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRA--DGDQKEYAKQKLQ 323 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~--~~~~~~l~~~~~~ 323 (361)
+..|.+|+.++|++.+. +.+++++|+|||+||++|+.+.|.|+++++.+++ ..+.|+.||| +.+ .+++ ++|+
T Consensus 11 ~~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~-~~l~-~~~~ 86 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN-SAVC-RDFN 86 (244)
T ss_dssp TSSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT-HHHH-HHTT
T ss_pred CCCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh-HHHH-HHcC
Confidence 36799999999999774 4679999999999999999999999999999985 3799999999 567 9999 9999
Q ss_pred CCCCCeEEEEeCCCCC----eeecCCCCCCHHHHHHHHHHh
Q 018045 324 LGSFPTILFFPKHSSK----PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~~~Pt~~~~~~g~~~----~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|.++||+++|++|+.. .+.+.| .+.+.|.++|.++
T Consensus 87 v~~~Pt~~~~~~g~~~~~g~~~~~~g--~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 87 IPGFPTVRFFXAFTXNGSGAVFPVAG--ADVQTLRERLIDA 125 (244)
T ss_dssp CCSSSEEEEECTTCCSSSCEECCCTT--CCHHHHHHHHHHH
T ss_pred CCccCEEEEEeCCCcCCCCeeEecCC--CCHHHHHHHHHHH
Confidence 9999999999986542 233333 6999999999764
No 83
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.74 E-value=3.4e-18 Score=137.45 Aligned_cols=101 Identities=12% Similarity=0.185 Sum_probs=89.0
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc---------CCCchHHH
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------DGDQKEYA 318 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~---------~~~~~~l~ 318 (361)
++.+..++.++|++.++ . +++|+|||+||++|+.+.|.++++++.++ +.|+.||+ +.+ .+++
T Consensus 15 ~~~v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~-~~l~ 85 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAA-RLEM 85 (135)
T ss_dssp TTEEEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHH-HHHH
T ss_pred cCceeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhh-HHHH
Confidence 45789999999999886 3 99999999999999999999999998874 89999999 777 8999
Q ss_pred HHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 319 KQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 319 ~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|+|.++||+++|++|+. ...+.| ..+.+.+.++++++
T Consensus 86 -~~~~v~~~Pt~~~~~~G~~-v~~~~G-~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 86 -NKAGVEGTPTLVFYKEGRI-VDKLVG-ATPWSLKVEKAREI 124 (135)
T ss_dssp -HHHTCCSSSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred -HHcCCceeCeEEEEcCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999999999998873 344555 79999999999876
No 84
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.73 E-value=1.2e-17 Score=129.42 Aligned_cols=105 Identities=22% Similarity=0.306 Sum_probs=89.0
Q ss_pred CCceec-CcccHHHHHhhcC-CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLDH-RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
..+..+ +.++|++.+.... .+++++|.||++||++|+.+.|.++++++.++ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~-~~~~-~~~~v~~ 79 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDEL-KAVA-EEWNVEA 79 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTC-HHHH-HHHHCSS
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcccc-HHHH-HhCCCCc
Confidence 457777 6689998886332 48899999999999999999999999999986 499999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 80 ~Pt~~~~~~G~~-~~~~~g--~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 80 MPTFIFLKDGKL-VDKTVG--ADKDGLPTLVAKH 110 (113)
T ss_dssp TTEEEEEETTEE-EEEEEC--CCTTHHHHHHHHH
T ss_pred ccEEEEEeCCEE-EEEEec--CCHHHHHHHHHHh
Confidence 999999998873 233444 5788999999875
No 85
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.73 E-value=1.5e-17 Score=134.12 Aligned_cols=105 Identities=14% Similarity=0.240 Sum_probs=89.0
Q ss_pred CCceec-CcccHHHHHhhc-CCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
..+..+ +.++|++.+... ..+++++|+||++||++|+.+.|.++++++.++ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~-~~~~-~~~~v~~ 99 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDEL-SDFS-ASWEIKA 99 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCE
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCccc-HHHH-HHcCCCc
Confidence 456667 478999887533 258899999999999999999999999999985 499999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 100 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 100 TPTFFFLRDGQQ-VDKLVG-A-NKPELHKKITAI 130 (139)
T ss_dssp ESEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred ccEEEEEcCCeE-EEEEeC-C-CHHHHHHHHHHH
Confidence 999999988873 334455 4 889999999865
No 86
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.73 E-value=3.1e-18 Score=138.66 Aligned_cols=102 Identities=10% Similarity=0.135 Sum_probs=77.4
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCC--ChhHHhhHHHHHHHHHHhcCCCeE--EEEEEcCCCchHHHHHcCCCC
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNGVK--VGKFRADGDQKEYAKQKLQLG 325 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~w--C~~C~~~~p~~~~la~~~~~~~v~--~~~vd~~~~~~~l~~~~~~v~ 325 (361)
.+..+++++|++++. ..+.++|.|+++| |++|+.+.|.|+++++.+ + ++. |++||++.+ ++++ ++|+|.
T Consensus 18 ~~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~-~~la-~~~~V~ 90 (142)
T 2es7_A 18 GWQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQS-EAIG-DRFNVR 90 (142)
T ss_dssp TCEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHH-HHHH-HTTTCC
T ss_pred cCcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCC-HHHH-HhcCCC
Confidence 688999999999886 6677999999987 999999999999999999 5 688 999999999 9999 999999
Q ss_pred CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 91 ~iPT~~~fk~G~~-v~~~~G-~~~~~~l~~~i~~~ 123 (142)
T 2es7_A 91 RFPATLVFTDGKL-RGALSG-IHPWAELLTLMRSI 123 (142)
T ss_dssp SSSEEEEESCC-----CEES-CCCHHHHHHHHHHH
T ss_pred cCCeEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999998874 344555 68899999999864
No 87
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.73 E-value=2.7e-17 Score=128.98 Aligned_cols=103 Identities=20% Similarity=0.341 Sum_probs=85.8
Q ss_pred CCceec--CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTL--NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l--~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
..+..+ +.++|++.+. +++++++|+||++||++|+.+.|.++++++.+ + ++.|+.||++.+ .+++ ++|+|.+
T Consensus 3 ~~v~~~~g~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~-~~~~-~~~~i~~ 76 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIK--EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKN-GNAA-DAYGVSS 76 (118)
T ss_dssp CCSEEECSCHHHHHHHHH--HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEecCCHHHHHHHHH--hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCC-HHHH-HhcCCCC
Confidence 457777 5678885442 26899999999999999999999999999999 4 699999999999 9999 9999999
Q ss_pred CCeEEEEeC----CCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPK----HSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~----g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++ |+. ...+.| ...++|.+.|++.
T Consensus 77 ~Pt~~~~~~~~~~G~~-~~~~~G--~~~~~l~~~~~~~ 111 (118)
T 2f51_A 77 IPALFFVKKEGNEIKT-LDQFVG--ADVSRIKADIEKF 111 (118)
T ss_dssp SSEEEEEEEETTEEEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcceE-EEeecC--CCHHHHHHHHHHh
Confidence 999999987 653 334555 4567799998875
No 88
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=1.2e-17 Score=134.27 Aligned_cols=104 Identities=14% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
..|.+|+.++|++.+.....++++||+|||+||++|+.+.|.|+++++.+. ++.|+.||++.. . ++|+|.++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~-~----~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSC-I----EHYHDNCLP 82 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSS-C----SSCCSSCCS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcC-c----ccCCCCCCC
Confidence 468889999999987633345799999999999999999999999999985 499999999987 3 689999999
Q ss_pred eEEEEeCCCCCeeecCCC------CCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSE------RRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~------~~~~~~l~~~i~~~ 360 (361)
|+++|++|+. ...+.|. ..+.++|.++|++.
T Consensus 83 t~~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TIFVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999998885 3333331 13789999999864
No 89
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.73 E-value=2.9e-17 Score=128.27 Aligned_cols=105 Identities=18% Similarity=0.300 Sum_probs=88.9
Q ss_pred CCceec-CcccHHHHHhhc-CCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
..+..+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.++ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~-~~~~-~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDEL-KDVA-EAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccC-HHHH-HHcCCCc
Confidence 457777 578899887632 147899999999999999999999999999986 499999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 82 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 82 MPTFLFIKDGEK-VDSVVG--GRKDDIHTKIVAL 112 (118)
T ss_dssp BSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CcEEEEEeCCeE-EEEecC--CCHHHHHHHHHHH
Confidence 999999998873 333444 5889999999874
No 90
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.73 E-value=8.5e-18 Score=134.76 Aligned_cols=105 Identities=10% Similarity=0.211 Sum_probs=87.5
Q ss_pred CCCceecCc-ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 248 SQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 248 ~~~v~~l~~-~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
...+.++++ ++|++++. ...++++||+|||+||++|+.+.|.|+++++.+ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 19 ~~~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~-~~l~-~~~~v~~ 92 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIH-PKLN-DQHNIKA 92 (133)
T ss_dssp TEEEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CccEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccch-HHHH-HhcCCCC
Confidence 356888875 88888875 234679999999999999999999999998876 389999999999 9999 9999999
Q ss_pred CCeEEEEe--CCCCC-eeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFP--KHSSK-PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~--~g~~~-~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|+ +|+.. ...+.| . +.++|.++|+++
T Consensus 93 ~Pt~~~~~~~~g~g~~~~~~~G-~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 93 LPTFEFYFNLNNEWVLVHTVEG-A-NQNDIEKAFQKY 127 (133)
T ss_dssp SSEEEEEEEETTEEEEEEEEES-C-CHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCeEEEEEEcC-C-CHHHHHHHHHHH
Confidence 99999996 77632 344555 4 899999999875
No 91
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.72 E-value=2.5e-17 Score=160.29 Aligned_cols=106 Identities=20% Similarity=0.395 Sum_probs=95.4
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
.|.+|++++|++++...+.+++++|+|||+||++|+.+.|.|+++++.+++ .+.|++|||+.+ .++| ++|+|.++||
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-IVPLAKVDCTAN-TNTC-NKYGVSGYPT 78 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCCEEEEETTTC-HHHH-HHTTCCEESE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-ceEEEEEECCCC-HHHH-HhcCCCCCCE
Confidence 588999999999886222339999999999999999999999999999988 699999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...|.| .++.+.|.+||++.
T Consensus 79 l~~~~~g~~-~~~~~G-~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 79 LKIFRDGEE-AGAYDG-PRTADGIVSHLKKQ 107 (481)
T ss_dssp EEEEETTEE-EEECCS-CSSHHHHHHHHHHH
T ss_pred EEEEeCCce-eeeecC-ccCHHHHHHHHHhh
Confidence 999999863 677877 79999999999864
No 92
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.72 E-value=4.6e-17 Score=143.56 Aligned_cols=103 Identities=21% Similarity=0.524 Sum_probs=94.0
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
.+..++.++|++++. .+++++|+|||+||++|+.+.|.|+++++.+.+ .++.|+.||++.+ .+++ ++|+|.++
T Consensus 131 ~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~ 205 (241)
T 3idv_A 131 VTLVLTKENFDEVVN---DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE-TDLA-KRFDVSGY 205 (241)
T ss_dssp SSEECCTTTHHHHHH---HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceeccHHHHHHhhc---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC-HHHH-HHcCCccc
Confidence 578899999999887 778999999999999999999999999999976 2499999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+ .+.|.| .++.++|.+||++.
T Consensus 206 Pt~~~~~~g~--~~~~~g-~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 206 PTLKIFRKGR--PYDYNG-PREKYGIVDYMIEQ 235 (241)
T ss_dssp SEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEECCe--EEEecC-CCCHHHHHHHHHhh
Confidence 9999999987 677887 79999999999864
No 93
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.70 E-value=2e-16 Score=139.33 Aligned_cols=102 Identities=17% Similarity=0.322 Sum_probs=90.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEE--CCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCC-----CchHHH
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLY--APWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG-----DQKEYA 318 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~--a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~-----~~~~l~ 318 (361)
...|..|++++|++++. .+++|||.|| ||||+ +.|.|+++++.+.+ .++.|++|||+. + +++|
T Consensus 15 ~~~v~~Lt~~nF~~vi~---~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n-~~la 86 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVE---RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN-KALG 86 (248)
T ss_dssp CTTCEECCTTTHHHHHT---TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT-HHHH
T ss_pred CCCcEECCHHHHHHHHh---cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc-HHHH
Confidence 35689999999999775 7889999999 99998 99999999999953 379999999998 7 9999
Q ss_pred HHcCCCC--CCCeEEEEeCCC-CCeeec--CCCCCCHHHHHHHHHHh
Q 018045 319 KQKLQLG--SFPTILFFPKHS-SKPIKY--PSERRDVDSLMAFVDAL 360 (361)
Q Consensus 319 ~~~~~v~--~~Pt~~~~~~g~-~~~~~~--~~~~~~~~~l~~~i~~~ 360 (361)
++|+|. ++||+++|+ |+ ..+..| .| .++.+.|.+||++.
T Consensus 87 -~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G-~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 87 -DRYKVDDKNFPSIFLFK-GNADEYVQLPSHV-DVTLDNLKAFVSAN 130 (248)
T ss_dssp -HHTTCCTTSCCEEEEES-SSSSSEEECCTTS-CCCHHHHHHHHHHH
T ss_pred -HHhCCCcCCCCeEEEEe-CCcCcceeecccC-CCCHHHHHHHHHHh
Confidence 999999 999999999 87 346777 76 69999999999864
No 94
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.70 E-value=1.5e-16 Score=149.16 Aligned_cols=108 Identities=23% Similarity=0.555 Sum_probs=94.2
Q ss_pred cCCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCchHHHHHcCCC
Q 018045 246 FNSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQL 324 (361)
Q Consensus 246 ~~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~v 324 (361)
.....|..|+.++|++++. +.+++++|+||||||++|+.+.|.|+++++.+++ .++.++.||++.+ . + ++|+|
T Consensus 246 ~~~~~v~~l~~~~f~~~~~--~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~-~--~-~~~~v 319 (361)
T 3uem_A 246 WDKQPVKVLVGKNFEDVAF--DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN-E--V-EAVKV 319 (361)
T ss_dssp TTTSSSEEECTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC-B--C-SSCCC
T ss_pred cccCCcEEeecCchhhhcc--cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc-c--h-hhcCC
Confidence 3456799999999999873 4789999999999999999999999999999987 2699999999988 4 6 79999
Q ss_pred CCCCeEEEEeCC-CCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFFPKH-SSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~~~g-~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++||+++|++| +..+..|.| .++.++|.+||++.
T Consensus 320 ~~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 320 HSFPTLKFFPASADRTVIDYNG-ERTLDGFKKFLESG 355 (361)
T ss_dssp CSSSEEEEECSSSSCCCEECCS-CSSHHHHHHHHTTT
T ss_pred cccCeEEEEECCCCcceeEecC-CCCHHHHHHHHHhc
Confidence 999999999766 434788887 79999999999763
No 95
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.68 E-value=1.7e-16 Score=126.91 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=81.8
Q ss_pred ccHHHHHhh-cCCCCcEEEEEECCCChhHHhhHHHHH--HHHHHhcCCCeEEEEEEc---CCCchHHHHHcCCC---CCC
Q 018045 257 TGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYV--ELADKLAGNGVKVGKFRA---DGDQKEYAKQKLQL---GSF 327 (361)
Q Consensus 257 ~~f~~~~~~-~~~~~~vlv~F~a~wC~~C~~~~p~~~--~la~~~~~~~v~~~~vd~---~~~~~~l~~~~~~v---~~~ 327 (361)
.+|++.+.. ...+++++|+||++||++|+.+.|.|+ ++++.+++ ++.++.||+ +.+ .+++ ++|+| .++
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~-~~l~-~~~~v~~~~~~ 92 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRN-LELS-QAYGDPIQDGI 92 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSS-HHHH-HHTTCGGGGCS
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccch-HHHH-HHhCCccCCcc
Confidence 445544432 136899999999999999999999999 99999976 799999999 888 9999 99999 999
Q ss_pred CeEEEE-eCCCCCeeecCCC------CCCHHHHHHHHHHh
Q 018045 328 PTILFF-PKHSSKPIKYPSE------RRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~-~~g~~~~~~~~~~------~~~~~~l~~~i~~~ 360 (361)
||+++| ++|+. ...+.|+ ..+.+++.+||+++
T Consensus 93 Pt~~~~d~~G~~-~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 93 PAVVVVNSDGKV-RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp SEEEEECTTSCE-EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred ceEEEECCCCCE-EEEecCCcccccccCCHHHHHHHHHHh
Confidence 999999 67763 3333331 47899999999986
No 96
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.67 E-value=9.4e-17 Score=122.30 Aligned_cols=100 Identities=11% Similarity=0.101 Sum_probs=83.5
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH----HHHHcCC
Q 018045 249 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQ 323 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~ 323 (361)
.....| +.++|+++++ .+++++|+|+|+||++|+.+.|.|+++++. + ++.|++||++++ ++ ++ .+|+
T Consensus 6 ~~~~~i~s~e~f~~ii~---~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~-~v~~~~vdVde~-r~~Sn~IA-~~~~ 77 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIE---ENKYVFVLKHSETCPISANAYDQFNKFLYE--R-DMDGYYLIVQQE-RDLSDYIA-KKTN 77 (112)
T ss_dssp GCEEECCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H-TCCEEEEEGGGG-HHHHHHHH-HHHT
T ss_pred cceeecCCHHHHHHHHh---cCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C-CceEEEEEeecC-chhhHHHH-HHhC
Confidence 455666 5577999887 699999999999999999999999999985 3 699999999998 77 78 9999
Q ss_pred CCC-CCeEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 018045 324 LGS-FPTILFFPKHSSKPIKYPSERRDVDSLMAFV 357 (361)
Q Consensus 324 v~~-~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i 357 (361)
|++ .|++++|++|+..-..-. +..+.+.|.+.|
T Consensus 78 V~h~sPq~il~k~G~~v~~~SH-~~I~~~~l~~~~ 111 (112)
T 3iv4_A 78 VKHESPQAFYFVNGEMVWNRDH-GDINVSSLAQAE 111 (112)
T ss_dssp CCCCSSEEEEEETTEEEEEEEG-GGCSHHHHHHHT
T ss_pred CccCCCeEEEEECCEEEEEeec-cccCHHHHHHhh
Confidence 995 999999999995333233 368888888765
No 97
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.67 E-value=5e-16 Score=136.33 Aligned_cols=102 Identities=17% Similarity=0.347 Sum_probs=90.6
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEEC--CCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcC-----CCchHHHHH
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYA--PWCQFCQAMEGSYVELADKLAG-NGVKVGKFRAD-----GDQKEYAKQ 320 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a--~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~-----~~~~~l~~~ 320 (361)
..|..|++++|++++. .+++|||.||| |||+ +.|.|+++++.+.+ .++.|++||++ .+ +++| +
T Consensus 5 ~~v~~Lt~~nF~~~i~---~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~-~~l~-~ 75 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIP---KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN-MELS-E 75 (240)
T ss_dssp TTCEECCTTHHHHHGG---GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS-HHHH-H
T ss_pred CCceECCHHHHHHHHc---CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh-HHHH-H
Confidence 4689999999999875 78899999999 9999 99999999999974 37999999954 47 9999 9
Q ss_pred cCCCC--CCCeEEEEeCCC-CCeeecCCCCCCHHHHHHHHHHh
Q 018045 321 KLQLG--SFPTILFFPKHS-SKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 321 ~~~v~--~~Pt~~~~~~g~-~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|+|. ++||+++|++|+ ..+..|.| .++.+.|.+||++.
T Consensus 76 ~~~V~~~~~PTl~~f~~G~~~~~~~y~G-~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 76 KYKLDKESYPVFYLFRDGDFENPVPYTG-AVKVGAIQRWLKGQ 117 (240)
T ss_dssp HTTCCGGGCSEEEEEETTCSSCCEECCS-CSCHHHHHHHHHHT
T ss_pred HcCCCCCCCCEEEEEeCCCcCcceeecC-CCCHHHHHHHHHHh
Confidence 99999 999999999998 34678887 79999999999864
No 98
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.67 E-value=5.2e-16 Score=151.26 Aligned_cols=108 Identities=18% Similarity=0.364 Sum_probs=92.1
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCC--CchHHHHHcCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG--DQKEYAKQKLQ 323 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~--~~~~l~~~~~~ 323 (361)
+..|.+|+.++|++.+. +.+++++|+|||+||++|+.+.|.|+++++.+++ ..+.|+.|||+. + .+++ ++|+
T Consensus 11 ~~~V~~Lt~~~f~~~v~--~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~-~~l~-~~~~ 86 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVL--GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN-SAVC-REFN 86 (519)
T ss_dssp TSSSEEECTTTHHHHHS--SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-HHHH-HHTT
T ss_pred CCCcEECChHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-HHHH-HHcC
Confidence 35799999999998764 3679999999999999999999999999999986 369999999964 6 8999 9999
Q ss_pred CCCCCeEEEEeCCCC---CeeecCCCCCCHHHHHHHHHHh
Q 018045 324 LGSFPTILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~~~Pt~~~~~~g~~---~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|.++||+++|++|+. ....+.| ..+.+.|.++|+++
T Consensus 87 V~~~PTl~~f~~g~~~G~~~~~~~g-~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 87 IAGFPTVRFFQAFTKNGSGATLPGA-GANVQTLRMRLIDA 125 (519)
T ss_dssp CCSBSEEEEECTTCCSCCCEEECCS-SCCHHHHHHHHHHH
T ss_pred CcccCEEEEEcCcccCCCceeEecC-CCCHHHHHHHHHHH
Confidence 999999999986443 2344555 58999999999764
No 99
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.67 E-value=2.8e-16 Score=137.25 Aligned_cols=103 Identities=11% Similarity=0.141 Sum_probs=88.6
Q ss_pred ceecCcccHHHHHhhcCCCCcE-EEEEECCCChhHHhhHHHHHHHHHHhcC---CCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 251 LVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAG---NGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~v-lv~F~a~wC~~C~~~~p~~~~la~~~~~---~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
+..+++++|+.+.. .++++ +|.|||+||++|+.+.|.++++++.+++ .++.|+.||++.+ .+++ ++|+|.+
T Consensus 118 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~ 192 (226)
T 1a8l_A 118 ETNLMDETKQAIRN---IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY-PEWA-DQYNVMA 192 (226)
T ss_dssp CCCCCHHHHHHHTT---CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC-HHHH-HHTTCCS
T ss_pred CCCCCHHHHHHHHh---cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC-HHHH-HhCCCcc
Confidence 44578888888754 56677 9999999999999999999999999971 2799999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 193 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 193 VPKIVIQVNGED-RVEFEG-AYPEKMFLEKLLSA 224 (226)
T ss_dssp SCEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cCeEEEEeCCce-eEEEcC-CCCHHHHHHHHHHh
Confidence 999999998874 455666 78999999999875
No 100
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.49 E-value=4.1e-18 Score=130.16 Aligned_cols=104 Identities=25% Similarity=0.429 Sum_probs=90.1
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
.|.+++.++|++.+. +.+++++|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (106)
T 2yj7_A 2 SVIEVTDENFEQEVL--KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN-PNTA-AQYGIRSIPT 76 (106)
Confidence 367889999986552 3788999999999999999999999999999986 799999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 77 LLLFKNGQV-VDRLVG-AQPKEALKERIDKH 105 (106)
Confidence 999988773 344555 68899999999875
No 101
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.67 E-value=1.7e-16 Score=125.33 Aligned_cols=103 Identities=12% Similarity=0.234 Sum_probs=86.5
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECC-------CChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-------CCCch
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAP-------WCQFCQAMEGSYVELADKLAGNGVKVGKFRA-------DGDQK 315 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~-------wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~-------~~~~~ 315 (361)
.+...+.++|++.+.. ..+++++|+|||+ ||++|+.+.|.++++++.+++ ++.|+.||+ +.+ .
T Consensus 6 ~v~~~~~~~~~~~~~~-~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~-~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQ-HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPN-N 82 (123)
T ss_dssp EEEEESHHHHHHHHHT-TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTT-C
T ss_pred eEEeccHHHHHHHHHH-hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchh-H
Confidence 3556678899988761 1389999999999 999999999999999999876 799999999 677 8
Q ss_pred HHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 316 EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 316 ~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
+++ ++|+|.++||+++|+++.. ...+.+ .+.+.|.+||++
T Consensus 83 ~~~-~~~~i~~~Pt~~~~~~~~~-~~g~~~--~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFR-KNLKVTAVPTLLKYGTPQK-LVESEC--LQANLVEMLFSE 122 (123)
T ss_dssp HHH-HHHCCCSSSEEEETTSSCE-EEGGGG--GCHHHHHHHHHC
T ss_pred HHH-HHCCCCeeCEEEEEcCCce-Eecccc--CCHHHHHHHHhc
Confidence 999 8999999999999988653 344443 678999999875
No 102
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=2.4e-16 Score=125.38 Aligned_cols=105 Identities=15% Similarity=0.246 Sum_probs=86.2
Q ss_pred ceecCcccHHHHHhhc-CCCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCC--CchHHHHHcCCC
Q 018045 251 LVTLNRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADG--DQKEYAKQKLQL 324 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~--~~~~l~~~~~~v 324 (361)
...++..+|++.+... ..+++++|+||++||++|+.+.|.+ +.+++.++. ++.++.||++. + ..++ ++|+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-~~~~-~~~~v 84 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEG-VELR-KKYGV 84 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTH-HHHH-HHTTC
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcch-HHHH-HHcCC
Confidence 4556788898876432 2588999999999999999999999 788877765 68999999984 5 7899 99999
Q ss_pred CCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++||+++| ++|+. ...+.| ..+.++|.++|+++
T Consensus 85 ~~~Pt~~~~d~~G~~-~~~~~G-~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 85 HAYPTLLFINSSGEV-VYRLVG-AEDAPELLKKVKLG 119 (130)
T ss_dssp CSSCEEEEECTTSCE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcE-EEEecC-CCCHHHHHHHHHHH
Confidence 999999999 56663 345555 68999999999875
No 103
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.66 E-value=7.1e-17 Score=140.12 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=88.6
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
..|.++ +.++|.+.+.....+++|||+||++||++|+.+.|.|.++++.+. ++.|++||++ + +.++ .+|+|.++
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~-~~l~-~~~~i~~~ 173 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-N-TGAG-DRFSSDVL 173 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-H-HTCS-TTSCGGGC
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-c-HHHH-HHCCCCCC
Confidence 458888 889999988644446899999999999999999999999999995 5999999999 6 8899 89999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCC-------HHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRD-------VDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~-------~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..+ .++|..||.+.
T Consensus 174 PTl~~~~~G~~-v~~~~G-~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTLLVYKGGEL-ISNFIS-VAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEEEEEETTEE-EEEETT-GGGGSCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeC-CcccCcccCCHHHHHHHHHHc
Confidence 99999998874 334444 333 59999999864
No 104
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.66 E-value=3.8e-16 Score=125.19 Aligned_cols=100 Identities=21% Similarity=0.369 Sum_probs=83.0
Q ss_pred CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcC----CCchHHHHHcCCCCCC
Q 018045 255 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD----GDQKEYAKQKLQLGSF 327 (361)
Q Consensus 255 ~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~----~~~~~l~~~~~~v~~~ 327 (361)
+.++|+..+... .++++||+||++||++|+.+.|.+ .++++.+++ +.++.||++ .+ .+++ ++|+|.++
T Consensus 18 ~~~~~~~~l~~~-~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~-~~l~-~~~~v~~~ 92 (134)
T 2fwh_A 18 TVDELNQALVEA-KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQD-VALL-KHLNVLGL 92 (134)
T ss_dssp SHHHHHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHH-HHHH-HHTTCCSS
T ss_pred CHHHHHHHHHHh-cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchH-HHHH-HHcCCCCC
Confidence 556777766522 389999999999999999999999 999999875 999999994 45 7899 99999999
Q ss_pred CeEEEE-eCCCCCe-eecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFF-PKHSSKP-IKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~-~~g~~~~-~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++| ++|+... ..+.| ..+.++|.++|+++
T Consensus 93 Pt~~~~d~~G~~v~~~~~~G-~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 93 PTILFFDGQGQEHPQARVTG-FMDAETFSAHLRDR 126 (134)
T ss_dssp SEEEEECTTSCBCGGGCBCS-CCCHHHHHHHHHHC
T ss_pred CEEEEECCCCCEeeeeeeee-ccCHHHHHHHHHhc
Confidence 999999 6776311 35666 78999999999875
No 105
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.66 E-value=3.8e-16 Score=125.09 Aligned_cols=102 Identities=14% Similarity=0.225 Sum_probs=89.6
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC--C
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS--F 327 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~--~ 327 (361)
-|.++|.++|++++. .+.+++|+|||+ |++|+.+.|.++++|++|++ .+.|++||++++ +.++ ++|+|++ +
T Consensus 7 lv~~~t~~~f~~~~~---~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~-~~~a-~~~gi~~~~i 79 (133)
T 2djk_A 7 LIGEIGPETYSDYMS---AGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAF-GAHA-GNLNLKTDKF 79 (133)
T ss_dssp CSEECCHHHHHHHHH---TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTT-GGGT-TTTTCCSSSS
T ss_pred ceeccChHHHHHHhc---CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHh-HHHH-HHcCCCcccC
Confidence 478899999998875 788999999999 89999999999999999988 899999999999 8999 9999999 9
Q ss_pred CeEEEEeC--CCCCeeecC-CCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPK--HSSKPIKYP-SERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~--g~~~~~~~~-~~~~~~~~l~~~i~~~ 360 (361)
||+++|++ |+ ..... .|..+.+.|.+||+++
T Consensus 80 Ptl~i~~~~~g~--~~~~~~~g~~~~~~l~~fi~~~ 113 (133)
T 2djk_A 80 PAFAIQEVAKNQ--KFPFDQEKEITFEAIKAFVDDF 113 (133)
T ss_dssp SEEEEECTTTCC--BCCCCSSSCCCHHHHHHHHHHH
T ss_pred CEEEEEecCcCc--ccCCCCccccCHHHHHHHHHHH
Confidence 99999987 54 34443 1378999999999865
No 106
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.64 E-value=1.5e-15 Score=147.72 Aligned_cols=108 Identities=24% Similarity=0.589 Sum_probs=95.9
Q ss_pred CCCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCC-CeEEEEEEcCCCchHHHHHcCCCC
Q 018045 247 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYAKQKLQLG 325 (361)
Q Consensus 247 ~~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~-~v~~~~vd~~~~~~~l~~~~~~v~ 325 (361)
....|..++.++|++++. +++++++|+|||+||++|+.+.|.|+++++.+++. ++.|++||++.+ +++ ++|+|.
T Consensus 350 ~~~~v~~~~~~~~~~~~~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--~~~-~~~~v~ 424 (481)
T 3f8u_A 350 NDGPVKVVVAENFDEIVN--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--DVP-SPYEVR 424 (481)
T ss_dssp CCSSSEEECTTTHHHHHT--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS--CCC-TTCCCC
T ss_pred CCCCeEEecccCHHHHhh--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch--hhH-hhCCCc
Confidence 346788999999999875 35899999999999999999999999999999873 799999999988 788 899999
Q ss_pred CCCeEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~~g~~~-~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++||+++|++|+.. +..+.| .++.++|.+||++.
T Consensus 425 ~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 425 GFPTIYFSPANKKLNPKKYEG-GRELSDFISYLQRE 459 (481)
T ss_dssp SSSEEEEECTTCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred ccCEEEEEeCCCeEeeeEeCC-CCCHHHHHHHHHHh
Confidence 99999999988863 678887 69999999999864
No 107
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.64 E-value=3.5e-16 Score=137.67 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=87.6
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
+.|.+| +.++|.+.+.....+++|||+|||+||++|+.+.|.|.++++.+.+ +.|++||++. ..++ .+|+|.++
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~--~~l~-~~~~I~~~ 186 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN--TGAG-DRFSSDVL 186 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH--HCCT-TSSCTTTC
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc--HHHH-HHCCCCCC
Confidence 458888 7899999886334588999999999999999999999999999975 9999999975 4678 89999999
Q ss_pred CeEEEEeCCCCCeeecCC------CCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPS------ERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~------~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...+.| ..++.+.|..||.+.
T Consensus 187 PTll~~~~G~~-v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTLLVYKGGEL-LSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEEEEEETTEE-EEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeCCcccccccccHHHHHHHHHHc
Confidence 99999998874 222333 235788999999764
No 108
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.64 E-value=4.7e-16 Score=159.99 Aligned_cols=105 Identities=22% Similarity=0.482 Sum_probs=89.1
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
...|..|+.++|+++++ ++++++|+|||+||++|+.+.|.|+++++.+++ .+.|++|||+.+ +++| ++|+|.++
T Consensus 115 ~~~v~~l~~~~f~~~i~---~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 188 (780)
T 3apo_A 115 DPEIITLERREFDAAVN---SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSY 188 (780)
T ss_dssp CTTEEECCHHHHHHHHT---SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-SSCC---------
T ss_pred CcceeeechHhHHhhhc---CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC-ceEEEEEeCCCc-HHHH-HHcCCcee
Confidence 35799999999999986 899999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 328 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
||+++|++|+. ...|.| .++.+.|.+||.+.
T Consensus 189 Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 219 (780)
T 3apo_A 189 PSLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 219 (780)
T ss_dssp CEEEEECTTSC-CEECCS-CSCHHHHHHHHHTT
T ss_pred eeEEEEeCCcE-eeEecC-CCCHHHHHHHHHHh
Confidence 99999999885 567877 79999999999864
No 109
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.63 E-value=5.5e-17 Score=129.01 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=88.3
Q ss_pred CCceec-CcccHHHHHhhc-CCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
..+.++ +.++|++.+... .++++++|+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~-~~~~-~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDEL-KEVA-EKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTS-GGGH-HHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccch-HHHH-HHcCCCc
Confidence 467778 458899887632 258899999999999999999999999999986 499999999999 9999 9999999
Q ss_pred CCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 90 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 90 MPTFLFIKDGAE-ADKVVG--ARKDDLQNTIVKH 120 (130)
T ss_dssp SCCCCBCTTTTC-CBCCCT--TCTTTHHHHHHHH
T ss_pred cceEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 999999988873 333444 5778999998865
No 110
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.62 E-value=7.4e-16 Score=112.84 Aligned_cols=82 Identities=16% Similarity=0.293 Sum_probs=74.1
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 349 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~ 349 (361)
.+.++.||++||++|+.+.|.++++++.+++ ++.|+.||++++ .+++ ++|+|.++||+++ +|+ . .+.| ..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMEN-PQKA-MEYGIMAVPTIVI--NGD--V-EFIG-APT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSS-CCTT-TSTTTCCSSEEEE--TTE--E-ECCS-SSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCC-HHHH-HHCCCcccCEEEE--CCE--E-eeec-CCC
Confidence 4689999999999999999999999999986 799999999999 8999 9999999999999 666 4 6666 678
Q ss_pred HHHHHHHHHHh
Q 018045 350 VDSLMAFVDAL 360 (361)
Q Consensus 350 ~~~l~~~i~~~ 360 (361)
.++|.++|+++
T Consensus 74 ~~~l~~~l~~~ 84 (85)
T 1fo5_A 74 KEALVEAIKKR 84 (85)
T ss_dssp SHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 111
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.62 E-value=1.2e-15 Score=127.66 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=81.4
Q ss_pred CceecCcccHHHHHhhc-CCCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCchHH--------
Q 018045 250 NLVTLNRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQKEY-------- 317 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~~~~l-------- 317 (361)
....++..+|++.+... .++++++|+|||+||++|+.|++.+ .++.+.+++ ++.|+.||++.+ .++
T Consensus 27 ~~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~-~~~~~~~~~~~ 104 (172)
T 3f9u_A 27 NEVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK-TPLTEPVKIME 104 (172)
T ss_dssp -CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC-CEEEEEEEEEE
T ss_pred cccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc-cccchhhhhhh
Confidence 34556677888776432 3689999999999999999986655 677777765 699999999877 543
Q ss_pred ------------------HHHcCCCCCCCeEEEE-eCCCCCeeecCCCCCC-HHHHHHHHHHh
Q 018045 318 ------------------AKQKLQLGSFPTILFF-PKHSSKPIKYPSERRD-VDSLMAFVDAL 360 (361)
Q Consensus 318 ------------------~~~~~~v~~~Pt~~~~-~~g~~~~~~~~~~~~~-~~~l~~~i~~~ 360 (361)
+ ++|+|.++||+++| ++|+. ...+.| ..+ .++|.++|+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~Pt~~lid~~G~~-~~~~~G-~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 105 NGTERTLRTVGDKWSYLQR-VKFGANAQPFYVLIDNEGNP-LNKSYA-YDEDISKYINFLQTG 164 (172)
T ss_dssp TTEEEEEEEHHHHHHHHHH-HHHSCCCSSEEEEECTTSCB-SSCCBC-SCCCHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhhHHHH-HHcCCCCcceEEEECCCCCE-EeeccC-CCCCHHHHHHHHHHH
Confidence 6 78999999999999 56663 334445 666 99999999764
No 112
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.61 E-value=1.7e-15 Score=144.35 Aligned_cols=95 Identities=17% Similarity=0.371 Sum_probs=80.7
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCC-------CeEEEEEEcCCCchHHHHH
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-------GVKVGKFRADGDQKEYAKQ 320 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~-------~v~~~~vd~~~~~~~l~~~ 320 (361)
...|.+|+.++|++++. .+.++++||+|||+||++|+.+.|.|+++++.+++. .+.|++||++.+ ++++ +
T Consensus 22 ~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~-~~la-~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHR-VAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE-VDLC-R 98 (470)
T ss_dssp CTTEEECSCSCGGGTCT-TGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC-HHHH-H
T ss_pred CCCcEECCHHHHHHHHH-hCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC-HHHH-H
Confidence 46799999999998775 234589999999999999999999999999999731 499999999999 9999 9
Q ss_pred cCCCCCCCeEEEEeCCCC-CeeecCC
Q 018045 321 KLQLGSFPTILFFPKHSS-KPIKYPS 345 (361)
Q Consensus 321 ~~~v~~~Pt~~~~~~g~~-~~~~~~~ 345 (361)
+|+|.++||+++|++|+. ....|.|
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G 124 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECG 124 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCC
T ss_pred HcCCCccCeEEEEECCCceEEEEeeC
Confidence 999999999999976543 3445555
No 113
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.61 E-value=8.6e-16 Score=112.49 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=72.9
Q ss_pred cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCH
Q 018045 271 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 350 (361)
Q Consensus 271 ~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~ 350 (361)
..+|.||++||++|+.+.|.++++++.+++ ++.|+.||++.+ .+++ ++|+|.++||+++ +|+ . .+.| ..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVD-REKA-IEYGLMAVPAIAI--NGV--V-RFVG-APSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTC-GGGG-GGTCSSCSSEEEE--TTT--E-EEEC-SSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhCCceeeCEEEE--CCE--E-EEcc-CCCH
Confidence 468999999999999999999999999986 799999999999 9999 9999999999999 776 4 5566 5788
Q ss_pred HHHHHHHHHh
Q 018045 351 DSLMAFVDAL 360 (361)
Q Consensus 351 ~~l~~~i~~~ 360 (361)
++|.++|+++
T Consensus 74 ~~l~~~l~~~ 83 (85)
T 1nho_A 74 EELFEAINDE 83 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 114
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.61 E-value=4.9e-15 Score=144.98 Aligned_cols=106 Identities=25% Similarity=0.575 Sum_probs=91.4
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhc-C-CCeEEEEEEcCCCchHHHHHcCCCC
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA-G-NGVKVGKFRADGDQKEYAKQKLQLG 325 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~-~-~~v~~~~vd~~~~~~~l~~~~~~v~ 325 (361)
...|..|+.++|++++. +.++++||+|||+||++|+.+.|.|+++++.++ + .++.+++||++.+ . +. . |+|.
T Consensus 357 ~~~v~~l~~~~f~~~v~--~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~-~~-~-~~v~ 430 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVN--DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEN-D-VR-G-VVIE 430 (504)
T ss_dssp SCSEEEECTTTHHHHHH--CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGC-C-CS-S-CCCS
T ss_pred cccceecccccHHHhhc--cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcc-c-cc-c-CCce
Confidence 46799999999999874 468999999999999999999999999999987 2 3699999999987 3 44 4 9999
Q ss_pred CCCeEEEEeCCCC-CeeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFPKHSS-KPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~~g~~-~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++||+++|++|+. ....|.| .++.++|.+||++.
T Consensus 431 ~~Pt~~~~~~G~~~~~~~~~G-~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 431 GYPTIVLYPGGKKSESVVYQG-SRSLDSLFDFIKEN 465 (504)
T ss_dssp SSSEEEEECCTTSCCCCBCCS-CCCHHHHHHHHHHH
T ss_pred ecCeEEEEeCCceecceEecC-CCCHHHHHHHHHhc
Confidence 9999999988864 2567777 68999999999864
No 115
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.57 E-value=8.4e-15 Score=128.21 Aligned_cols=98 Identities=14% Similarity=0.258 Sum_probs=85.1
Q ss_pred ceecCcccHHHHHhhcCCCCcE-EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~v-lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
+..+++++|+.++. .++++ +|.||++||++|+.+.|.++++++.+. ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 120 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 192 (229)
T 2ywm_A 120 KPQLSEKTLELLQV---VDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASEN-QDLA-EQFQVVGVPK 192 (229)
T ss_dssp CCSCCHHHHHHHTT---CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGC-HHHH-HHTTCCSSSE
T ss_pred ccCCCHHHHHHHHh---cCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCC-HHHH-HHcCCcccCE
Confidence 56688899998764 55666 889999999999999999999999983 699999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++ +|+ ...+.| ..+.++|.++|+++
T Consensus 193 ~~~--~G~--~~~~~G-~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 193 IVI--NKG--VAEFVG-AQPENAFLGYIMAV 218 (229)
T ss_dssp EEE--GGG--TEEEES-CCCHHHHHHHHHHH
T ss_pred EEE--CCE--EEEeeC-CCCHHHHHHHHHHH
Confidence 998 676 455776 78999999999764
No 116
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.56 E-value=2.9e-15 Score=115.66 Aligned_cols=90 Identities=12% Similarity=0.191 Sum_probs=67.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhc-CCCeEEEEEEcCCCc-hHHHHHcCCCCCCCeEEEEeCCCCCeeecCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLA-GNGVKVGKFRADGDQ-KEYAKQKLQLGSFPTILFFPKHSSKPIKYPS 345 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~-~~~v~~~~vd~~~~~-~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~ 345 (361)
+.+.+||+|||+||++|+.|.+.+....+... ...+.+.+||++.+. .+++ .+|+|.++||+++|++|++ .....
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la-~~~~V~g~PT~i~f~~G~e-v~Ri~- 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLE-LARPVTFTPTFVLMAGDVE-SGRLE- 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCB-CSSCCCSSSEEEEEETTEE-EEEEE-
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHH-HHCCCCCCCEEEEEECCEE-Eeeec-
Confidence 56789999999999999999975543321110 012778899998862 4788 8999999999999999884 33444
Q ss_pred CCCCHHHHHHHHHHh
Q 018045 346 ERRDVDSLMAFVDAL 360 (361)
Q Consensus 346 ~~~~~~~l~~~i~~~ 360 (361)
|....+.|.++|+++
T Consensus 94 G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 94 GYPGEDFFWPMLARL 108 (116)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 489999999999865
No 117
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.55 E-value=1.9e-14 Score=118.09 Aligned_cols=99 Identities=11% Similarity=0.259 Sum_probs=77.7
Q ss_pred ccHHHHHhhc-CCCCcEEEEEE-CCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCc----------hHHHHHc
Q 018045 257 TGMENLARLD-HRQEPWLVVLY-APWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ----------KEYAKQK 321 (361)
Q Consensus 257 ~~f~~~~~~~-~~~~~vlv~F~-a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~~----------~~l~~~~ 321 (361)
.++.+.+... ..+++++|+|| |+||++|+.+.|.+ .++.+.+.. ++.++.||++... .+++ ++
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~-~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELK-AQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHH-HH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHH-HH
Confidence 3455444322 25899999999 99999999999999 788777654 6999999998751 3888 89
Q ss_pred CCCCCCCeEEEE-eCCCCCeeecCCCCC--CHHHHHHHHHHh
Q 018045 322 LQLGSFPTILFF-PKHSSKPIKYPSERR--DVDSLMAFVDAL 360 (361)
Q Consensus 322 ~~v~~~Pt~~~~-~~g~~~~~~~~~~~~--~~~~l~~~i~~~ 360 (361)
|+|.++||+++| ++|+. ...+ | .. +.++|.++|+++
T Consensus 112 ~~v~~~Pt~~~~d~~G~~-~~~~-G-~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQ-LARM-G-FEPGGGAAYVSKVKSA 150 (154)
T ss_dssp TTCCSSSEEEEECTTCCE-EEEE-C-CCTTCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCCE-EEEe-c-CCCCCHHHHHHHHHHH
Confidence 999999999999 56663 3344 4 56 899999999875
No 118
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.31 E-value=4.7e-16 Score=123.74 Aligned_cols=89 Identities=16% Similarity=0.251 Sum_probs=74.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcC--CCchHHHHHcCCCCCCCeEEEE--eCCCCC-
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFF--PKHSSK- 339 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~v~~~Pt~~~~--~~g~~~- 339 (361)
.++++||+|||+||++|+.+.|.+ +++++.+++ ++.++.||++ .+ .+++ ++|+|.++||+++| ++|+..
T Consensus 18 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 18 HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEG-QELA-RRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 688999999999999999999999 999998876 7999999995 45 7899 99999999999999 456521
Q ss_pred eeecCCCCCCHHHHHHHHHHh
Q 018045 340 PIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 340 ~~~~~~~~~~~~~l~~~i~~~ 360 (361)
...+.| ..+.++|.++|+++
T Consensus 95 ~~~~~G-~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 95 VGRLFG-SRPRAEFLKELRQV 114 (130)
Confidence 233444 68889999998865
No 119
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=99.54 E-value=3.8e-14 Score=130.14 Aligned_cols=154 Identities=16% Similarity=0.146 Sum_probs=110.1
Q ss_pred CcEEEEecchHHHHHH-HHHHHc----CCC-ceEEEccCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhc
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT----GRP-FRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSK 81 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~----~~~-i~v~~~dtg~~--~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~ 81 (361)
++++|++|||+||++| +++.+. +.+ +.++|+|+|.. .++..++++++++++|++++++..+... +....
T Consensus 25 ~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~~v~~~~~~~---~~~~~ 101 (317)
T 1wy5_A 25 RRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRA---FAKEN 101 (317)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHH---HHHHT
T ss_pred CEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEEechh---hhccC
Confidence 6899999999999877 888774 567 88999999964 5788999999999999999988766432 22232
Q ss_pred CCCCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCC--CcCCcCCCCCeEEEeeCccC
Q 018045 82 GLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPV--FEGLEGGVGSLVKWNPVANV 157 (361)
Q Consensus 82 ~~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~--~~~~~~~~~~~~~~~Pi~~W 157 (361)
+ .+...||...+...+.+..+ +.+.+++|++++|.. ....+........ ..+.. ...+ ..++||++|
T Consensus 102 ~------~~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~dD~~-Et~l~~l~rg~g~~gl~~~~-~~~~-~iirPLl~~ 172 (317)
T 1wy5_A 102 R------MSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDLL-ETSLLFFTRGTGLDGLIGFL-PKEE-VIRRPLYYV 172 (317)
T ss_dssp T------CCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHHH-HHHHHHHHHCCCHHHHHCSC-SEET-TEECTTTTC
T ss_pred C------CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeCchhHHH-HHHHHHHHhCCCcccccCCC-CCCC-eEECCCccC
Confidence 2 14567888888888888776 678999999999853 3111111110000 00000 0001 368999999
Q ss_pred cHHHHHHHHHhCCCCCCc
Q 018045 158 KGNDIWNFLRTMDVPINS 175 (361)
Q Consensus 158 ~~~dv~~yi~~~~lp~~~ 175 (361)
+.+||++|++.+|+|+..
T Consensus 173 ~k~eI~~~~~~~gl~~~~ 190 (317)
T 1wy5_A 173 KRSEIEEYAKFKGLRWVE 190 (317)
T ss_dssp CHHHHHHHHHHTTCCCCC
T ss_pred CHHHHHHHHHHcCCCeeE
Confidence 999999999999999864
No 120
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.53 E-value=4.1e-15 Score=121.17 Aligned_cols=70 Identities=14% Similarity=0.175 Sum_probs=52.0
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEe-CCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP-KHSS 338 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~-~g~~ 338 (361)
++++|||+|||+||++|+.|.|.+.+..+.....+..|+.||+|.+..+++ .+++|.++||++||+ +|+.
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~-~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKN-LSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGG-GCTTCCCSSEEEEECTTSCB
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhH-hhcCCCCCCEEEEECCCCCE
Confidence 699999999999999999999999864322110012455566653325667 899999999999998 7763
No 121
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.52 E-value=5.9e-15 Score=122.51 Aligned_cols=97 Identities=18% Similarity=0.342 Sum_probs=75.2
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH-HHHHcCCC--CCCCeEEEE
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-YAKQKLQL--GSFPTILFF 333 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~-l~~~~~~v--~~~Pt~~~~ 333 (361)
++|+.... .++++||+|||+||++|+.+.|.|+++++.+.. ++.|+.||++.+ .+ ++ ..|++ .++||+++|
T Consensus 37 ~~~~~~~~---~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~-~~~~~-~~~~~~~~~~Pt~~~~ 110 (164)
T 1sen_A 37 DGKKEAAA---SGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDE-EEPKD-EDFSPDGGYIPRILFL 110 (164)
T ss_dssp HHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGG-GSCSC-GGGCTTCSCSSEEEEE
T ss_pred HHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCC-chHHH-HHhcccCCcCCeEEEE
Confidence 44555444 789999999999999999999999998877654 577888888877 55 77 78888 669999999
Q ss_pred -eCCCCCeeecCCC---------CCCHHHHHHHHHHh
Q 018045 334 -PKHSSKPIKYPSE---------RRDVDSLMAFVDAL 360 (361)
Q Consensus 334 -~~g~~~~~~~~~~---------~~~~~~l~~~i~~~ 360 (361)
++|+. ...+.|. ..+.++|.++|+++
T Consensus 111 d~~G~~-~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 111 DPSGKV-HPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp CTTSCB-CTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CCCCCE-EEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 67763 2233331 26889999998764
No 122
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.52 E-value=1.2e-14 Score=120.72 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=67.2
Q ss_pred eecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCC---CCCCC
Q 018045 252 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQ---LGSFP 328 (361)
Q Consensus 252 ~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~---v~~~P 328 (361)
..++++.+..+.. -.+++++|+|||+||++|+.+.|.++++++.++ ++.|+.||.+.+ ++++ .+|. +.++|
T Consensus 39 ~~~~~~~~~~l~~--~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~-~~~~-~~~~~~~v~~iP 112 (167)
T 1z6n_A 39 NGLPSALTERLQR--IERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRA-EDDL-RQRLALERIAIP 112 (167)
T ss_dssp HCCCHHHHHHHHT--CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHH-HHHT-TTTTTCSSCCSS
T ss_pred cCCCHHHHHHHHH--hCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCC-HHHH-HHHHHcCCCCcC
Confidence 3455555554432 246899999999999999999999999999875 599999999988 8888 8887 99999
Q ss_pred eEEEEeCCCC
Q 018045 329 TILFFPKHSS 338 (361)
Q Consensus 329 t~~~~~~g~~ 338 (361)
|+++|++|+.
T Consensus 113 t~i~~~~~G~ 122 (167)
T 1z6n_A 113 LVLVLDEEFN 122 (167)
T ss_dssp EEEEECTTCC
T ss_pred eEEEECCCCC
Confidence 9999988644
No 123
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.52 E-value=8.5e-14 Score=143.21 Aligned_cols=109 Identities=24% Similarity=0.480 Sum_probs=96.7
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
+.|..|+.++|++++...+.++.++|.||+|||++|+.+.|.|+++++.+++ .+.|+.|||+.+ ..+| ++|+|.++|
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 619 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-LINVGSVDCGQY-HSFC-TQENVQRYP 619 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-CeEEEEEECcch-HHHH-HHcCCCCCC
Confidence 6799999999999886333467899999999999999999999999999998 899999999999 9999 999999999
Q ss_pred eEEEEeCCCC---CeeecCCCCCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~---~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+++|+.|.. ....|.|..++.++|.+||++.
T Consensus 620 ti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 654 (780)
T 3apo_A 620 EIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGF 654 (780)
T ss_dssp EEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTT
T ss_pred eEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhh
Confidence 9999988764 3577876468999999999864
No 124
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.51 E-value=9.8e-14 Score=113.14 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC-----------------------chHHHHHcCC-
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----------------------QKEYAKQKLQ- 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~-----------------------~~~l~~~~~~- 323 (361)
.++++||+||++||++|+.+.|.++++++.+++.++.|+.|+++.. ...++ +.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFM-KTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHH-HTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHH-HHhCC
Confidence 5799999999999999999999999999999766899999999732 14577 7899
Q ss_pred -CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 324 -LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 -v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+.++|++++++..+.....+.| ..+.++|.++|+++
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 138 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITG-EVNEKSLTDAVKLA 138 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCS-CCCHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 9999999999544433555665 78999999999876
No 125
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.51 E-value=9.4e-14 Score=110.69 Aligned_cols=86 Identities=21% Similarity=0.363 Sum_probs=75.3
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC----------------------CchHHHHHcCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------DQKEYAKQKLQLG 325 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~----------------------~~~~l~~~~~~v~ 325 (361)
.+++++|.||++||++|+.+.|.++++++.++ ++.|+.|+++. + ..++ ++|+|.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD-GVIW-ARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT-SHHH-HHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc-hhHH-HhcCCC
Confidence 57899999999999999999999999999997 59999999987 4 6888 899999
Q ss_pred CCCeEEEEe-CCCCCeeecC---CCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFP-KHSSKPIKYP---SERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~-~g~~~~~~~~---~~~~~~~~l~~~i~~~ 360 (361)
++|++++++ +|+ ...+. | ..+.++|.++|+++
T Consensus 99 ~~P~~~lid~~G~--i~~~~~~~g-~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 99 WQPAFVFYRADGT--STFVNNPTA-AMSQDELSGRVAAL 134 (136)
T ss_dssp SSSEEEEECTTSC--EEEECCSSS-CCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCc--EEEEEcCCC-ccCHHHHHHHHHHH
Confidence 999999995 555 33555 5 68999999999876
No 126
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.51 E-value=8e-14 Score=123.17 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=79.3
Q ss_pred cCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhc--C-CCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 254 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA--G-NGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 254 l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~--~-~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
++.+.++.+.. -.++.+++.||||||++|+.+.|.|++++..++ + .++.+..||++.+ ++++ ++|+|.++||+
T Consensus 125 l~~~~~~~~~~--~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~V~~vPt~ 200 (243)
T 2hls_A 125 LEDATKEALKS--LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN-PDIA-DKYGVMSVPSI 200 (243)
T ss_dssp CCHHHHHHHHH--CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred CCHHHHHHHHH--cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC-HHHH-HHcCCeeeCeE
Confidence 44455555433 135677999999999999999999999999983 1 3699999999999 9999 89999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++ +|+ . .+.| .++.++|.++|++.
T Consensus 201 ~i--~G~--~-~~~G-~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 201 AI--NGY--L-VFVG-VPYEEDFLDYVKSA 224 (243)
T ss_dssp EE--TTE--E-EEES-CCCHHHHHHHHHHH
T ss_pred EE--CCE--E-EEeC-CCCHHHHHHHHHHH
Confidence 88 665 3 3666 68999999999864
No 127
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.51 E-value=2e-14 Score=139.91 Aligned_cols=172 Identities=13% Similarity=0.110 Sum_probs=113.4
Q ss_pred hHhC-CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCC
Q 018045 6 EKFG-NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGL 83 (361)
Q Consensus 6 ~~~~-~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~ 83 (361)
+..+ ++++|++|||+||+++ +|+.+.+.++.++|+|+|...++..+.++++++++|++++++..+...... ..+.
T Consensus 205 ~~~~~~kvvvalSGGvDSsvla~ll~~~g~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~~~~f~~~---l~g~ 281 (503)
T 2ywb_A 205 ERAGKDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKERFLKA---LKGV 281 (503)
T ss_dssp HHHTTSEEEEEECSSHHHHHHHHHHHHHTCEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEECHHHHHHH---HTTC
T ss_pred hhccCccEEEEecCCcchHHHHHHHHHcCCeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEECcHHHHHh---hcCC
Confidence 3344 6899999999999877 888888888999999999888888999999999999999988665321111 1222
Q ss_pred CCCCccchhchhhccccHHHHHHHc---cCCEEEEeeeccCCccCccC--CCceecCCCCcCCcCCCCCeEEEeeCccCc
Q 018045 84 FSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPGTRSE--IPVVQVDPVFEGLEGGVGSLVKWNPVANVK 158 (361)
Q Consensus 84 ~~~~~~~~~~cc~~~K~~pl~~~~~---~~~~~i~G~R~~Es~~~R~~--~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~ 158 (361)
. .+. ..+..|...+...+.+..+ +.+.+++|+..+|-...|.. ...+.......+.. ...+...++||.+|+
T Consensus 282 ~-~pe-~~r~~~~~~~~~~l~~~A~~~~g~~~la~G~~~~D~~Et~~~g~~~~iks~~~l~~l~-~~~~~~ii~PL~~l~ 358 (503)
T 2ywb_A 282 E-DPE-EKRKIIGREFVAAFSQVARERGPFRFLAQGTLYPDVIESAGGHGAAKIKSHHNVGGLP-EDLEFELLEPFRLLF 358 (503)
T ss_dssp C-CHH-HHHHHHHHHHHHHHHHHHHHHCCCSEEECCCCHHHHHC-----------------CCC-SSCCCEEECTTTTCC
T ss_pred C-ChH-HHhhhhhHHHHHHHHHHHHhcCCCCEEEECCcCccchhhccCCccccccccccccccc-ccccCceEehhhcCC
Confidence 1 111 1222333445677777665 67899999965542112221 00000000000000 012356899999999
Q ss_pred HHHHHHHHHhCCCCCCccccCCCCC
Q 018045 159 GNDIWNFLRTMDVPINSLHSQGYIS 183 (361)
Q Consensus 159 ~~dv~~yi~~~~lp~~~lY~~g~~~ 183 (361)
++||++|.+++|||++.++++.|..
T Consensus 359 K~EVr~~a~~~glp~~i~~~~P~~~ 383 (503)
T 2ywb_A 359 KDEVRELALLLGLPDTLRLRHPFPG 383 (503)
T ss_dssp HHHHHHHHHHTTCCHHHHSCCCCCT
T ss_pred HHHHHHHHHHcCCChhheecCCCCC
Confidence 9999999999999999898887654
No 128
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.51 E-value=2.1e-14 Score=119.48 Aligned_cols=79 Identities=13% Similarity=0.281 Sum_probs=67.3
Q ss_pred ecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHH-H--HHHHHHhcCCCeEEEEEEcCCCchHHHHHcC-------
Q 018045 253 TLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-Y--VELADKLAGNGVKVGKFRADGDQKEYAKQKL------- 322 (361)
Q Consensus 253 ~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~-~--~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~------- 322 (361)
...++.|+.... .+++|||+|||+||++|+.|.|. | .++++.+++ ++.+++||.++. +++. +.|
T Consensus 26 ~~~~ea~~~A~~---~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~-~~l~-~~y~~~~q~~ 99 (173)
T 3ira_A 26 PWGEEAFEKARK---ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREER-PDID-NIYMTVCQII 99 (173)
T ss_dssp CSSHHHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTC-HHHH-HHHHHHHHHH
T ss_pred CcCHHHHHHHHH---hCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCccc-CcHH-HHHHHHHHHH
Confidence 345577777766 79999999999999999999994 3 678888876 799999999998 9998 788
Q ss_pred -CCCCCCeEEEEe-CCC
Q 018045 323 -QLGSFPTILFFP-KHS 337 (361)
Q Consensus 323 -~v~~~Pt~~~~~-~g~ 337 (361)
+|.++||+++|+ +|+
T Consensus 100 ~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 100 LGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HSCCCSSEEEEECTTSC
T ss_pred cCCCCCcceeeECCCCC
Confidence 999999999996 565
No 129
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.51 E-value=6.6e-15 Score=112.86 Aligned_cols=74 Identities=16% Similarity=0.302 Sum_probs=61.4
Q ss_pred CCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------CCchHHHHHcCCCCCCCeEEEEeCCCCCeee
Q 018045 269 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIK 342 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~ 342 (361)
+++++|.|||+||++|+.+.|.|+++++.++ .||++ .+ .+++ ++|+|.++||+++ +|+ .
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~-~~l~-~~~~V~~~PT~~i--~G~--~-- 76 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR--T-- 76 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCC-CHHH-HHTTCCSSSEEEE--TTE--E--
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchh-HHHH-HHcCCeEeCEEEE--CCE--E--
Confidence 5677999999999999999999999986553 45665 45 8899 9999999999877 665 2
Q ss_pred cCCCCCCHHHHHHHHH
Q 018045 343 YPSERRDVDSLMAFVD 358 (361)
Q Consensus 343 ~~~~~~~~~~l~~~i~ 358 (361)
+.| .++.++|.+|+.
T Consensus 77 ~~G-~~~~~~l~~~~~ 91 (106)
T 3kp8_A 77 YTG-VRSLEALAVASG 91 (106)
T ss_dssp EES-CCCHHHHHHHHT
T ss_pred ecC-CCCHHHHHHHhC
Confidence 566 799999999874
No 130
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.50 E-value=1.6e-13 Score=113.32 Aligned_cols=90 Identities=13% Similarity=0.269 Sum_probs=75.3
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcC-------------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKL------------------------- 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~------------------------- 322 (361)
.++++||.||++||++|+.+.|.+.++++.+++.++.|+.|+++.. .+.. ++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ-LPNV-KNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC-HHHH-HHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 5789999999999999999999999999999875699999999987 6555 555
Q ss_pred --CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 --QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 --~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++.++|++++++..+.....+.| ..+.++|.++|+++
T Consensus 111 ~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 111 DGGITGIPTSFVIDASGNVSGVIVG-PRSKADFDRIVKMA 149 (165)
T ss_dssp TTCSCSSSEEEEECTTSBEEEEECS-CCCHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 89999999999544433445555 68999999999875
No 131
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.50 E-value=2e-13 Score=110.30 Aligned_cols=101 Identities=15% Similarity=0.182 Sum_probs=81.5
Q ss_pred eecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--------------------
Q 018045 252 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-------------------- 311 (361)
Q Consensus 252 ~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-------------------- 311 (361)
..++.+.+..... .+++++|.||++||++|+.+.|.++++++.+++ .+.|+.|+++
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 90 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-QLNVVAVHMPRSEDDLDPGKIKETAAEHDI 90 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEECCCSTTTSSHHHHHHHHHHTTC
T ss_pred ccccCcccchhhc---CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEEcCCCccccCHHHHHHHHHHcCC
Confidence 4566666655433 679999999999999999999999999999987 5999999964
Q ss_pred -------CCchHHHHHcCCCCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 312 -------GDQKEYAKQKLQLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 312 -------~~~~~l~~~~~~v~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.+ ..++ +.|+|.++|+++++ ++|+ ....+.| ..+.++|.++|+++
T Consensus 91 ~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 91 TQPIFVDSD-HALT-DAFENEYVPAYYVFDKTGQ-LRHFQAG-GSGMKMLEKRVNRV 143 (148)
T ss_dssp CSCEEECSS-CHHH-HHTCCCCSSEEEEECTTCB-EEEEEES-CSTTHHHHHHHHHH
T ss_pred CcceEECCc-hhHH-HHhCCCCCCEEEEECCCCc-EEEEecC-CCCHHHHHHHHHHH
Confidence 34 6788 89999999999999 4554 2444555 67889999999875
No 132
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.49 E-value=7e-14 Score=100.28 Aligned_cols=74 Identities=15% Similarity=0.252 Sum_probs=64.3
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCC-CH
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERR-DV 350 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~-~~ 350 (361)
..|.||++||++|+.+.|.++++++.+++ ++.++.|| + .+++ ++|+|.++||+++ +|+ .+.. | .. +.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~---~-~~~~-~~~~v~~~Pt~~~--~G~--~~~~-G-~~~~~ 69 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIK---E-MDQI-LEAGLTALPGLAV--DGE--LKIM-G-RVASK 69 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC---S-HHHH-HHHTCSSSSCEEE--TTE--EEEC-S-SCCCH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEec---C-HHHH-HHCCCCcCCEEEE--CCE--EEEc-C-CCCCH
Confidence 46899999999999999999999999986 79999998 5 7899 8999999999999 676 4444 5 66 89
Q ss_pred HHHHHHH
Q 018045 351 DSLMAFV 357 (361)
Q Consensus 351 ~~l~~~i 357 (361)
++|.++|
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998875
No 133
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=99.49 E-value=4.3e-14 Score=128.90 Aligned_cols=167 Identities=19% Similarity=0.264 Sum_probs=101.9
Q ss_pred hHhC-CcEEEEecchHHHHHH-HHHHHc-CCCceEEEccCCCCcHHHHHHHHH-HHHHhCCcEEEEcCChHHHHHHHHhc
Q 018045 6 EKFG-NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDE-VEKHFGIRIEYMFPDAVEVQALVRSK 81 (361)
Q Consensus 6 ~~~~-~~i~vs~SGGKDS~~l-~l~~~~-~~~i~v~~~dtg~~~pet~~~v~~-~~~~~g~~i~~~~p~~~~~~~~~~~~ 81 (361)
+..+ ++++|++|||+||+++ +|+.+. +.++.++|+|+|...++..+.+.+ +++++|++++++..+.. +.. ...
T Consensus 16 ~~v~~~kvlvalSGGvDSsvla~ll~~~~g~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-f~~--~l~ 92 (308)
T 2dpl_A 16 ETVGDSKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQDR-FFS--ALK 92 (308)
T ss_dssp HHHTTSCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEECHHH-HHH--HTT
T ss_pred HHhCCCCEEEEEeChHHHHHHHHHHHHhhCCCEEEEEEcCCCCChHHHHHHHHHHHHHcCCcEEEEECCHH-HHH--hhh
Confidence 3344 7899999999999877 888776 888999999999865444555665 66789999998866432 111 112
Q ss_pred CCCCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcH
Q 018045 82 GLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKG 159 (361)
Q Consensus 82 ~~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~ 159 (361)
+. ..+......||.. ....+.+..+ +.+.+++|+.++|....+..+.... +. .+ .....+...++||.+|++
T Consensus 93 ~~-~~pe~~~~~~~~~-~~~~l~~~A~~~g~~~la~Gh~~dD~~Et~~~iks~~--~~-~~-l~~~~~~~virPL~~l~K 166 (308)
T 2dpl_A 93 GV-TDPEEKRKIIGRV-FIEVFEEVAKKIGAEYLIQGTIAPDWIESQGKIKSHH--NV-GG-LPEKLNLKLIEPLRDLYK 166 (308)
T ss_dssp TC-CCHHHHHHHHHHH-HHHHHHHHHHHHTCSEEECCCCCC-------------------------CCCEEECTTTTCCH
T ss_pred CC-CCHHHHHHHHHHH-HHHHHHHHHHHcCcCEEEECCCCccchhhccchhhhh--cc-cc-CCccCCCeEEEEcccCCH
Confidence 22 1111112234443 3445555554 6789999999886532222121110 00 00 000123567999999999
Q ss_pred HHHHHHHHhCCCCCCccccCCC
Q 018045 160 NDIWNFLRTMDVPINSLHSQGY 181 (361)
Q Consensus 160 ~dv~~yi~~~~lp~~~lY~~g~ 181 (361)
+||++|.+.+|+|++..+.+.|
T Consensus 167 ~EI~~~a~~~glp~~i~~~~P~ 188 (308)
T 2dpl_A 167 DEVRELAKFLGLPEKIYNRMPF 188 (308)
T ss_dssp HHHHHHHHHTTCCHHHHTCCCC
T ss_pred HHHHHHHHHhCCCceeeecCCC
Confidence 9999999999999876665443
No 134
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.48 E-value=8.2e-14 Score=121.50 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=79.7
Q ss_pred ccHHHHHhhcCCCCcEEEEEECC-CChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC--CchHHHHHcCCCCCCCeEEEE
Q 018045 257 TGMENLARLDHRQEPWLVVLYAP-WCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLGSFPTILFF 333 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~-wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--~~~~l~~~~~~v~~~Pt~~~~ 333 (361)
+++++++.....+..+++.||++ ||++|+.+.|.++++++. .+ ++.|+.||++. + ++++ ++|+|.++||+++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~~ 85 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFDTPEG-KELA-KRYRIDRAPATTIT 85 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETTSHHH-HHHH-HHTTCCSSSEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCCCccc-HHHH-HHcCCCcCceEEEE
Confidence 45555551122456678999999 999999999999999865 34 69999999998 8 9999 99999999999999
Q ss_pred eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 334 PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 334 ~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|+.....|.| ..+.+++.+|+..+
T Consensus 86 ~~g~~~~~~~~G-~~~~~~l~~~l~~~ 111 (226)
T 1a8l_A 86 QDGKDFGVRYFG-LPAGHEFAAFLEDI 111 (226)
T ss_dssp ETTBCCSEEEES-CCCTTHHHHHHHHH
T ss_pred cCCceeeEEEec-cCcHHHHHHHHHHH
Confidence 988754467766 56778888887653
No 135
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.48 E-value=2.2e-13 Score=108.40 Aligned_cols=86 Identities=21% Similarity=0.257 Sum_probs=74.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------CchHHHHHcCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----------------------DQKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-----------------------~~~~l~~~~~~v 324 (361)
.+++++|.||++||++|+.+.|.++++++.++ ++.|+.|+++. + ..++ +.|+|
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 99 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTD-GSVW-ANFGV 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTT-CHHH-HHTTC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCC-cHHH-HHcCC
Confidence 57899999999999999999999999999997 59999999854 4 6788 89999
Q ss_pred CCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++|++++++ +|+ ...+.| ..+.++|.++|+++
T Consensus 100 ~~~P~~~~id~~g~--i~~~~g-~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 100 TQQPAYAFVDPHGN--VDVVRG-RMSQDELTRRVTAL 133 (136)
T ss_dssp CSSSEEEEECTTCC--EEEEES-CCCHHHHHHHHHHH
T ss_pred CCCceEEEECCCCC--EEEEec-CCCHHHHHHHHHHH
Confidence 9999999995 555 335665 68899999999876
No 136
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.47 E-value=9.9e-14 Score=114.52 Aligned_cols=104 Identities=14% Similarity=0.274 Sum_probs=81.1
Q ss_pred CceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-------------------
Q 018045 250 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA------------------- 310 (361)
Q Consensus 250 ~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~------------------- 310 (361)
.+..++.+.+..... .++++||+||++||++|+.+.|.++++++.++..++.|+.|++
T Consensus 22 ~l~~~~g~~~~~~~~---~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVYLK---KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TCEETTSSBGGGGCC---TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred ccCCCCCCEeeHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 456666666654332 6889999999999999999999999999998655677776664
Q ss_pred ---------CCCchHHHHHcCCCCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 311 ---------DGDQKEYAKQKLQLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 311 ---------~~~~~~l~~~~~~v~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+.+ ..++ ++|+|.++|+++++ ++|+ ....+.| ..+.++|.++|+++
T Consensus 99 ~~~~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 99 NYPKLPVVTDNG-GTIA-QNLNISVYPSWALIGKDGD-VQRIVKG-SINEAQALALIRNP 154 (164)
T ss_dssp CCTTSCEEECTT-CHHH-HHTTCCSSSEEEEECTTSC-EEEEEES-CCCHHHHHHHHHCT
T ss_pred CCCcceEEEcCc-hHHH-HHcCCCccceEEEECCCCc-EEEEEcC-CCCHHHHHHHHHHH
Confidence 333 6788 89999999999999 5565 2444555 68999999999875
No 137
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.46 E-value=1.9e-13 Score=119.46 Aligned_cols=88 Identities=18% Similarity=0.269 Sum_probs=75.6
Q ss_pred CCCcEEEEEE-----CCCChhHHhhHHHHHHHHHHh--cCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCe
Q 018045 268 RQEPWLVVLY-----APWCQFCQAMEGSYVELADKL--AGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKP 340 (361)
Q Consensus 268 ~~~~vlv~F~-----a~wC~~C~~~~p~~~~la~~~--~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~ 340 (361)
..++++|.|| +|||++|+.+.|.|+++++.+ .+ .+.|++|||+.+ +++| ++|+|+++||+++|++|+ ..
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Ptl~~~~~~~-~~ 94 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQD-KIKLDIYSPFTH-KEET-EKYGVDRVPTIVIEGDKD-YG 94 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTT-TEEEEEECTTTC-HHHH-HHTTCCBSSEEEEESSSC-CC
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCC-ceEEEEecCccc-HHHH-HHcCCCcCcEEEEECCCc-cc
Confidence 5677777777 899999999999999999888 44 799999999999 9999 999999999999998654 36
Q ss_pred eecCCCCCCHHHHHHHHHHh
Q 018045 341 IKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 341 ~~~~~~~~~~~~l~~~i~~~ 360 (361)
..|.| ..+.++|.+|+.++
T Consensus 95 ~~~~G-~~~~~~l~~~~~~~ 113 (229)
T 2ywm_A 95 IRYIG-LPAGLEFTTLINGI 113 (229)
T ss_dssp EEEES-CCCTTHHHHHHHHH
T ss_pred ceecC-CccHHHHHHHHHHH
Confidence 77877 67888899888753
No 138
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.46 E-value=2.2e-13 Score=109.73 Aligned_cols=87 Identities=13% Similarity=0.276 Sum_probs=74.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------------------------CchHHHHHcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------------DQKEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------------------------~~~~l~~~~~ 322 (361)
.+++++|.||++||++|+.+.|.+.++++.++..++.|+.|+++. + ..++ +.|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK-GELM-KEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS-SHHH-HHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc-hhHH-Hhc
Confidence 678999999999999999999999999999984479999999964 4 6888 899
Q ss_pred CCCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHH
Q 018045 323 QLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVD 358 (361)
Q Consensus 323 ~v~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~ 358 (361)
+|.++|+++++ ++|+ ....+.| ..+.++|.++|+
T Consensus 111 ~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~ 145 (145)
T 3erw_A 111 HIITIPTSFLLNEKGE-IEKTKIG-PMTAEQLKEWTE 145 (145)
T ss_dssp TCCEESEEEEECTTCC-EEEEEES-CCCHHHHHHHHC
T ss_pred CcCccCeEEEEcCCCc-EEEEEcC-CcCHHHHHHhhC
Confidence 99999999999 5555 3445555 789999998874
No 139
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.46 E-value=4.3e-13 Score=109.20 Aligned_cols=90 Identities=9% Similarity=0.282 Sum_probs=75.9
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------chHHHHHcCCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLGS 326 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------~~~l~~~~~~v~~ 326 (361)
.++++||.||++||++|+.+.|.+.++++.+++.++.|+.|+++.. +..++ +.|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL-DAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH-HHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH-HhcCCCC
Confidence 5789999999999999999999999999999765699999999763 14788 8999999
Q ss_pred CCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 327 FPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|+++++ ++|+ ....+.| ..+.++|.++|+++
T Consensus 104 ~P~~~lid~~G~-i~~~~~G-~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 104 LPTTFLINPEGK-VVKVVTG-TMTESMIHDYMNLI 136 (151)
T ss_dssp SCEEEEECTTSE-EEEEEES-CCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCc-EEEEEeC-CCCHHHHHHHHHHH
Confidence 9999999 4555 2444555 67999999999876
No 140
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.45 E-value=4.9e-13 Score=108.85 Aligned_cols=89 Identities=17% Similarity=0.337 Sum_probs=76.3
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCch-----------------------HHHHHcCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK-----------------------EYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~-----------------------~l~~~~~~v 324 (361)
.+++++|.||++||++|+.+.|.+.++.+.+++.++.|+.|+++.. . .++ +.|+|
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v 106 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKN-KKAWENMVTKDQLKGIQLHMGTDRTFM-DAYLI 106 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSC-HHHHHHHHHHHTCCSEEEECSSCTHHH-HHTTC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCc-HHHHHHHHHhcCCCCceeecCcchhHH-HHcCc
Confidence 5789999999999999999999999999999865699999999876 4 688 89999
Q ss_pred CCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++|++++++ +|+ .+....|..+.++|.++|+++
T Consensus 107 ~~~P~~~lid~~G~--i~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 107 NGIPRFILLDRDGK--IISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp CSSCCEEEECTTSC--EEESSCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCe--EEEccCCCCCHHHHHHHHHHH
Confidence 9999999997 565 444333468889999999875
No 141
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.42 E-value=5.3e-13 Score=107.88 Aligned_cols=89 Identities=12% Similarity=0.206 Sum_probs=72.7
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH-------------------------HHHHcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-------------------------YAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~-------------------------l~~~~~ 322 (361)
.+++++|.||++||++|+.+.|.+.++.+.+++.++.|+.|+++.. .+ ++ +.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK-DEEWLKFIRSKKIGGWLNVRDSKNHTDFK-ITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS-SHHHHHHHHHHTCTTSEEEECTTCCCCHH-HHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC-HHHHHHHHHHcCCCCceEEeccccchhHH-Hhc
Confidence 5789999999999999999999999999999875699999999977 55 88 899
Q ss_pred CCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 323 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 323 ~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
+|.++|++++++..+.....+.| ..+.+++.+.+.+
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g-~~~~~~~l~~l~~ 143 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIG-YENLDDFLVQYEK 143 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCC-GGGHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCC-HHHHHHHHHHHHH
Confidence 99999999999544333445554 5666666666654
No 142
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.42 E-value=6.8e-13 Score=105.45 Aligned_cols=89 Identities=18% Similarity=0.300 Sum_probs=74.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc----------------------------CCCchHHHH
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA----------------------------DGDQKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~----------------------------~~~~~~l~~ 319 (361)
.+++++|.||++||++|+.+.|.++++++.+++ ++.++.|++ +.+ ..++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~- 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPS-GKLL- 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTT-CHHH-
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcc-hHHH-
Confidence 578999999999999999999999999999765 799999954 223 5788
Q ss_pred HcCCCCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 018045 320 QKLQLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDALR 361 (361)
Q Consensus 320 ~~~~v~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~~ 361 (361)
+.|+|.++|+++++ ++|+ ....+.| ..+.++|.++|+++.
T Consensus 98 ~~~~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l~ 138 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGK-LVKTHPG-FMEKDAILQTLKELA 138 (138)
T ss_dssp HHTTCCSSSEEEEECTTCC-EEEEEES-CCCHHHHHHHHHHCC
T ss_pred HHcCcccCCeEEEECCCCc-EEEeecC-CCcHHHHHHHHHhhC
Confidence 89999999999999 4555 3445555 789999999999874
No 143
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=7.2e-14 Score=119.91 Aligned_cols=144 Identities=15% Similarity=0.199 Sum_probs=100.9
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHH---HhcCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALV---RSKGLFS 85 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~---~~~~~~~ 85 (361)
++++|++|||+||+++ +++.+.+.++.++++|+|... ..++++++++.+|++++++..+........ ...+.
T Consensus 7 ~kv~v~~SGG~DS~~ll~ll~~~g~~v~~~~v~~~~~~--~~~~~~~~a~~lgi~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (203)
T 3k32_A 7 MDVHVLFSGGKDSSLSAVILKKLGYNPHLITINFGVIP--SYKLAEETAKILGFKHKVITLDRKIVEKAADMIIEHKY-- 82 (203)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTTEEEEEEEEECSSSC--TTHHHHHHHHHHTCEEEEEECCTHHHHHHHHHHHHHSS--
T ss_pred CeEEEEEECcHHHHHHHHHHHHcCCCeEEEEEeCCCch--HHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCC--
Confidence 4799999999999877 888888888899999999754 568999999999999988876643222111 11221
Q ss_pred CCccchhchhhccccHHHHHHHccCCEEEEeeeccCCcc--CccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHHHHH
Q 018045 86 FYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPG--TRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIW 163 (361)
Q Consensus 86 ~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~--~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dv~ 163 (361)
....| ..++...+.+..++.+++++|+++||... .|..+..+. .. .+...++||+.|+.+||+
T Consensus 83 ----~~~~c-~~~~~~~l~~~A~g~~~i~tGh~~dD~~et~~~~gl~~~~--~~--------~~~~iirPLl~~~k~eI~ 147 (203)
T 3k32_A 83 ----PGPAI-QYVHKTVLEILADEYSILADGTRRDDRVPKLSYSEIQSLE--MR--------KNIQYITPLMGFGYKTLR 147 (203)
T ss_dssp ----SHHHH-HHHHHHHHHHHTTTCSEEECCCCTTCCSSCCCHHHHHHHH--HH--------HTCEEECGGGGCCHHHHH
T ss_pred ----CccHH-HHHHHHHHHHHhcCCCEEEECCCcccchhhcchhhccCcc--cc--------cCCeEEeccCCCCHHHHH
Confidence 12233 44566677766668899999999998631 111111111 00 134468899999999999
Q ss_pred HHHHhCCCCC
Q 018045 164 NFLRTMDVPI 173 (361)
Q Consensus 164 ~yi~~~~lp~ 173 (361)
+|.+++ +++
T Consensus 148 ~~a~~~-l~~ 156 (203)
T 3k32_A 148 HLASEF-FIL 156 (203)
T ss_dssp HHHHHH-EEE
T ss_pred HHHHHh-CCc
Confidence 999987 544
No 144
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.42 E-value=9.1e-13 Score=108.17 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=74.2
Q ss_pred CCCcEEEEEECCCChhHHh-hHHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCchH--
Q 018045 268 RQEPWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGVKVGKFRAD----------------------------GDQKE-- 316 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~-~~p~~~~la~~~~~~~v~~~~vd~~----------------------------~~~~~-- 316 (361)
.++++||+||++||++|+. +.|.++++++.+++.++.|+.|+++ .. ..
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMP-REGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCc-cccc
Confidence 5899999999999999999 6999999999998757999999863 22 33
Q ss_pred ----HHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 317 ----YAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 317 ----l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++ +.|+|.++|++++++..+.....+.| ..+.++|.+.|+++
T Consensus 108 ~~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 153 (160)
T 3lor_A 108 RIPSTM-KKYRLEGTPSIILADRKGRIRQVQFG-QVDDFVLGLLLGSL 153 (160)
T ss_dssp SSCHHH-HHTTCCSSSEEEEECTTSBEEEEEES-CCCHHHHHHHHHHH
T ss_pred hhhhHH-HhcccCccceEEEECCCCcEEEEecC-cCCHHHHHHHHHHH
Confidence 88 89999999999999644333445555 68899999999875
No 145
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=99.42 E-value=3.1e-13 Score=117.44 Aligned_cols=176 Identities=13% Similarity=0.137 Sum_probs=104.1
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCCh-HHH------H-HHHHh
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDA-VEV------Q-ALVRS 80 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~-~~~------~-~~~~~ 80 (361)
++++|++|||+||+++ +++.+.+.++.++++|+|....+..++++++++++|++++++..+. ... . .+...
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~~~~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDMSLLNQLAPNALTRNDIEIE 83 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEECGGGGGGSTGGGC-------
T ss_pred CCEEEEccCcHHHHHHHHHHHHcCCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeChHHhhhccccccccccccc
Confidence 5899999999999876 8888877788899999996555678999999999999998876543 100 0 01000
Q ss_pred cCCCCCCccchhchhhcccc-HHHHHHHc--cCCEEEEeeeccCCccCccCCC----ceecCCCCcCCcCCCCCeEEEee
Q 018045 81 KGLFSFYEDGHQECCRVRKV-RPLRRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKWNP 153 (361)
Q Consensus 81 ~~~~~~~~~~~~~cc~~~K~-~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~----~~~~~~~~~~~~~~~~~~~~~~P 153 (361)
...... ..+...|...+. ..+.++.+ +.+++++|+.++|..+.|...+ .+....... ...+...++|
T Consensus 84 ~~~~~~--~~~~~~~r~~~~~~~~~~~a~~~g~~~i~tG~~~dd~~~~~~~~~~~~~~l~~~~~~~----~~~~~~ii~P 157 (219)
T 3bl5_A 84 VKDGEL--PSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLA----MEKPFVIHTP 157 (219)
T ss_dssp ---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHHH----HTSCCEEECT
T ss_pred ccccCC--CCceeechHHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCHHHHHHHHHHHHhc----cCCCeEEEec
Confidence 000000 011123444444 33344443 6789999999999631111100 011000000 0023457899
Q ss_pred CccCcHHHHHHHHHhCCCC---CCccccC--CCCCCCCCCCCC
Q 018045 154 VANVKGNDIWNFLRTMDVP---INSLHSQ--GYISIGCEPCTR 191 (361)
Q Consensus 154 i~~W~~~dv~~yi~~~~lp---~~~lY~~--g~~~~GC~~Ct~ 191 (361)
|.+|+..||++|.+.+||| +..-+.+ |..+.+|-.|+.
T Consensus 158 L~~~~K~ei~~~a~~~glp~~~~~~t~sc~~~~~~~~CG~C~~ 200 (219)
T 3bl5_A 158 LMWLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPA 200 (219)
T ss_dssp TTTCCHHHHHHHHHHTTCHHHHHHHCCCSTTSCCSSCCSCSHH
T ss_pred cccCCHHHHHHHHHHcCCCccchhheeeccCCCCCCCCCCCHH
Confidence 9999999999999999993 2333322 333367877753
No 146
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.42 E-value=1.6e-12 Score=106.79 Aligned_cols=91 Identities=15% Similarity=0.333 Sum_probs=74.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------------------CchHHHHHcCCCCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------DQKEYAKQKLQLGSFP 328 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------------------~~~~l~~~~~~v~~~P 328 (361)
.+++++|.||++||++|+.+.|.+.++++.+++.++.|+.|+++. + ..++ +.|+|.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDAT-GQVQ-QRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTT-SHHH-HHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECch-HHHH-HHhCCCCcc
Confidence 578999999999999999999999999999985579999999987 5 7899 999999999
Q ss_pred eEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHh
Q 018045 329 TILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 360 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~~-~~~~~~l~~~i~~~ 360 (361)
+++++...+.....+.|. ..+.+++.+.+++.
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 988885444334444442 45677888877654
No 147
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.42 E-value=1e-12 Score=107.74 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=73.9
Q ss_pred CCCcEEEEEECCCChhHHhh-HHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCch---
Q 018045 268 RQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRAD----------------------------GDQK--- 315 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~-~p~~~~la~~~~~~~v~~~~vd~~----------------------------~~~~--- 315 (361)
.++++||+||++||++|+.+ .|.+.++++.+++.++.|+.|+++ .. .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQP-GDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCc-cchh
Confidence 57899999999999999996 999999999998657999999864 11 2
Q ss_pred --HHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 316 --EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 316 --~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++ +.|+|.++|++++++..+.....+.| ..+.++|.+.|+++
T Consensus 106 ~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 106 MPRTM-AAYQMRGTPSLLLIDKAGDLRAHHFG-DVSELLLGAEIATL 150 (158)
T ss_dssp SCHHH-HHTTCCSSSEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred hHHHH-HHcCCCCCCEEEEECCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 578 89999999999999544433444555 68899999999875
No 148
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.41 E-value=4.8e-13 Score=101.81 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=68.5
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 349 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~ 349 (361)
...++.|+++||++|+.++|.++++++.+ ++.|..||++.+ +++. .+|++. +|++++|.+|+ .+ ..| ..+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~d-~~l~-~~ygv~-VP~l~~~~dG~--~v-~~g-~~~ 98 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINIDGN-EHLT-RLYNDR-VPVLFAVNEDK--EL-CHY-FLD 98 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTTC-HHHH-HHSTTS-CSEEEETTTTE--EE-ECS-SCC
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECCCC-HHHH-HHhCCC-CceEEEEECCE--EE-Eec-CCC
Confidence 36799999999999999999999999886 389999999999 9999 899997 99999999887 44 334 588
Q ss_pred HHHHHHHH
Q 018045 350 VDSLMAFV 357 (361)
Q Consensus 350 ~~~l~~~i 357 (361)
.++|.++|
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 89999887
No 149
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.40 E-value=2.2e-12 Score=104.97 Aligned_cols=92 Identities=14% Similarity=0.212 Sum_probs=74.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCch----------------------HHHHHcCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK----------------------EYAKQKLQLG 325 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~----------------------~l~~~~~~v~ 325 (361)
.++++||.||++||++|+.+.|.+.++++.+++.++.|+.|+++.+ . .++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK-TGDAMKFLAQVPAEFTVAFDPKGQTP-RLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS-HHHHHHHHHHSCCCSEEEECTTCHHH-HHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC-HHHHHHHHHHcCCCCceeECCcchhH-HHcCCC
Confidence 5789999999999999999999999999999875699999999876 4 677 889999
Q ss_pred CCCeEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHhC
Q 018045 326 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDALR 361 (361)
Q Consensus 326 ~~Pt~~~~~~g~~~~~~~~~~-~~~~~~l~~~i~~~~ 361 (361)
++|+++++...+.....+.|. ..+.++|.++|++++
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 999999994433333444442 346789999998763
No 150
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.40 E-value=1e-12 Score=105.91 Aligned_cols=86 Identities=16% Similarity=0.286 Sum_probs=70.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHH---HHHHhcCCCeEEEEEEcCCCchH------------------------HHHH
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKE------------------------YAKQ 320 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~---la~~~~~~~v~~~~vd~~~~~~~------------------------l~~~ 320 (361)
.+++++|+|||+||++|+.+.|.+.+ +.+.+++.++.++.|+.+.. .+ +. +
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 107 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE-LDEWKKHRNDFAKEWTNGYDKELVIKNK-N 107 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC-HHHHHHHGGGSCTTSEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC-HHHHHHHHHhcccccccccCccchhhhh-h
Confidence 46999999999999999999999999 99999766899999999876 33 36 7
Q ss_pred cCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 321 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 321 ~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
.|+|.++|++++++..+. .+ +.+ .+.++|.++|++
T Consensus 108 ~~~v~~~P~~~lid~~G~-i~-~~~--~~~~~l~~~l~e 142 (142)
T 3eur_A 108 LYDLRAIPTLYLLDKNKT-VL-LKD--ATLQKVEQYLAE 142 (142)
T ss_dssp CSCCTTCSEEEEECTTCB-EE-EEE--ECHHHHHHHHHC
T ss_pred hcCCCcCCeEEEECCCCc-EE-ecC--CCHHHHHHHHhC
Confidence 899999999999965543 23 322 357999999874
No 151
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.40 E-value=1.2e-12 Score=105.75 Aligned_cols=87 Identities=16% Similarity=0.262 Sum_probs=72.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHh-cCCCeEEEEEEcCCC------------------------chHHHHHcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFRADGD------------------------QKEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~-~~~~v~~~~vd~~~~------------------------~~~l~~~~~ 322 (361)
.++++||.||++||++|+.+.|.+.++++.+ ++.++.|+.|+++.. +..++ +.|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETA-KQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-HHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHH-Hhc
Confidence 5789999999999999999999999999999 665699999999874 14788 899
Q ss_pred CCCCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 QLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|.++|++++++ +|+ .+.. . .+.++|.++|+++
T Consensus 111 ~v~~~P~~~lid~~G~--i~~~-~--~~~~~l~~~l~~l 144 (148)
T 3fkf_A 111 AILTLPTNILLSPTGK--ILAR-D--IQGEALTGKLKEL 144 (148)
T ss_dssp TCCSSSEEEEECTTSB--EEEE-S--CCHHHHHHHHHHH
T ss_pred CCCCcCEEEEECCCCe--EEEe-c--CCHHHHHHHHHHH
Confidence 999999999994 554 3332 2 2789999998875
No 152
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.40 E-value=1.4e-12 Score=106.28 Aligned_cols=89 Identities=19% Similarity=0.274 Sum_probs=74.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-----------------------CCCchHHHHHcCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA-----------------------DGDQKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~-----------------------~~~~~~l~~~~~~v 324 (361)
.++++||.||++||++|+.+.|.+.++++.+++.++.|+.|+. +.+ ..++ +.|+|
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 104 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDAD-KAVG-QAFGT 104 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSS-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCch-HHHH-HHcCC
Confidence 5789999999999999999999999999999875688887774 344 6788 89999
Q ss_pred CCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++|+++++ ++|+ ....+.| ..+.++|.++|+++
T Consensus 105 ~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 105 QVYPTSVLIGKKGE-ILKTYVG-EPDFGKLYQEIDTA 139 (153)
T ss_dssp CSSSEEEEECSSSC-CCEEEES-SCCHHHHHHHHHHH
T ss_pred CccCeEEEECCCCc-EEEEEcC-CCCHHHHHHHHHHH
Confidence 999999999 4555 3445665 68999999999875
No 153
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.39 E-value=1.6e-12 Score=106.05 Aligned_cols=87 Identities=17% Similarity=0.282 Sum_probs=70.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------chHHHHHcCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKLQ 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------~~~l~~~~~~ 323 (361)
.+++++|.||++||++|+.+.|.+.++++.+++.++.|+.|+++.. +..++ +.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVL-ESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHH-HHhC
Confidence 5789999999999999999999999999999875699999999872 16788 8999
Q ss_pred CCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 324 LGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|.++|+++++ ++|+. ...+. +.++|.++|+++
T Consensus 107 v~~~P~~~lid~~G~i-~~~~~----~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKI-VAKEL----RGDDLYNTVEKF 139 (152)
T ss_dssp CCSSCEEEEECTTSEE-EEECC----CTTHHHHHHHHH
T ss_pred CCcCCeEEEECCCCeE-EEeeC----CHHHHHHHHHHH
Confidence 9999999999 45552 22222 345777777654
No 154
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.39 E-value=1.5e-12 Score=104.69 Aligned_cols=87 Identities=16% Similarity=0.363 Sum_probs=70.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHH---HHHHhcCCCeEEEEEEcCCCchHH------------------------HHH
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKEY------------------------AKQ 320 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~---la~~~~~~~v~~~~vd~~~~~~~l------------------------~~~ 320 (361)
.+++++|+||++||++|+.+.|.+.+ +.+.+++.++.|+.|+++.. .+. + +
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 103 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDEN-REEWATKAVYMPQGWIVGWNKAGDIRTR-Q 103 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSC-HHHHHHHHTTSCTTCEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCC-HHHHHHHHHHcCCCcceeeCCccchhhH-H
Confidence 57899999999999999999999998 88888765799999999876 432 2 3
Q ss_pred cCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 321 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 321 ~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.|+|.++|++++++..+. . .+ + ..+.++|.++|+++
T Consensus 104 ~~~v~~~P~~~lid~~G~-i-~~-~-~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKR-V-IL-K-DTSMEQLIDYLATQ 139 (142)
T ss_dssp CSCCCSSSEEEEECTTCB-E-EE-C-SCCHHHHHHHHHC-
T ss_pred HcCCCCCCeEEEECCCCC-E-Ee-c-CCCHHHHHHHHHHH
Confidence 899999999999954442 3 33 2 47899999999875
No 155
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.38 E-value=7.3e-13 Score=97.28 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=62.3
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHH
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDS 352 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~ 352 (361)
++.||++||++|+.++|.+++++..+ +.+||++++ ++++ .+|+++ +|++++ .+|+ .+. | ..+.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~-~~l~-~~~g~~-vPtl~~-~~G~--~v~--g-~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDD-AALE-SAYGLR-VPVLRD-PMGR--ELD--W-PFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTC-HHHH-HHHTTT-CSEEEC-TTCC--EEE--S-CCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCC-HHHH-HHhCCC-cCeEEE-ECCE--EEe--C-CCCHHH
Confidence 78999999999999999998875322 688999999 9999 899998 999998 7777 443 4 689999
Q ss_pred HHHHHHHh
Q 018045 353 LMAFVDAL 360 (361)
Q Consensus 353 l~~~i~~~ 360 (361)
|.++|++.
T Consensus 68 L~~~l~~~ 75 (87)
T 1ttz_A 68 LRAWLDAA 75 (87)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99999864
No 156
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.37 E-value=6e-12 Score=102.73 Aligned_cols=86 Identities=16% Similarity=0.266 Sum_probs=69.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH-----------------------HHHHcCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-----------------------YAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~-----------------------l~~~~~~v 324 (361)
.+++++|+||++||++|+.+.|.+.++++++++.++.|+.|+++.. .+ +. +.|+|
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD-EHFWKTSADNLPWVCVRDANGAYSSYI-SLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC-HHHHHHHHTTCSSEEEECSSGGGCHHH-HHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC-HHHHHHHHhCCCceEEECCCCcchHHH-HHcCc
Confidence 4689999999999999999999999999999875699999999877 43 77 89999
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHH
Q 018045 325 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 356 (361)
Q Consensus 325 ~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~ 356 (361)
.++|++++++..+.....+.| ..+.++...-
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g-~~~~e~~~~~ 142 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGEN-IKDLDEAIKK 142 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTT-CSCHHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCC-HHHHHHHHHH
Confidence 999999999644433444555 5666655443
No 157
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.36 E-value=4.1e-12 Score=106.91 Aligned_cols=89 Identities=13% Similarity=0.315 Sum_probs=71.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCe------EEEEEEcCC-CchHHHHHcC------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGV------KVGKFRADG-DQKEYAKQKL------------------ 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v------~~~~vd~~~-~~~~l~~~~~------------------ 322 (361)
.++++||+||++||++|+.+.|.+.++++.+++.++ .|+.|+++. . .+.. ++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~-~~~~-~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYS-RDIA-QDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCC-HHHH-HHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCC-HHHH-HHHHHHcCCCccEEECCcchH
Confidence 578999999999999999999999999999987457 999999998 5 5544 343
Q ss_pred -------CCCCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 -------QLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 -------~v~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++.++|+++++. +|+ ....+.| ..+.++|.++|+++
T Consensus 136 ~~~~~~~~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 136 AASLGGVPASVIPTTIVLDKQHR-PAAVFLR-EVTSKDVLDVALPL 179 (183)
T ss_dssp GGGTTTCCTTCCSEEEEECTTSC-EEEEECS-CCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCeEEEECCCCc-EEEEEcC-CCCHHHHHHHHHHH
Confidence 689999887774 555 3445555 68999999999875
No 158
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=99.36 E-value=1.6e-12 Score=124.19 Aligned_cols=153 Identities=14% Similarity=0.167 Sum_probs=105.1
Q ss_pred CCcEEEEecchHHHHHH-HHHHH-----cCCCceEEEccCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHh
Q 018045 9 GNDIAIAFSGAEDVALI-EYAHL-----TGRPFRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRS 80 (361)
Q Consensus 9 ~~~i~vs~SGGKDS~~l-~l~~~-----~~~~i~v~~~dtg~~--~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~ 80 (361)
+++++|++|||+||++| |++.+ .+.++.++|+|+|.. .++..++++++++++|+++.++.-+.. .
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~~~~~-------~ 85 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLA-------Q 85 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCCC-------C
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEecCC-------C
Confidence 47899999999999877 87776 456788999999964 356788999999999999988754422 1
Q ss_pred cCCCCCCccchhchhhccccHHHHHHHccCCEEEEeeeccCCccCccCCCceecCC-C-CcCC--cCCCCCeEEEeeCcc
Q 018045 81 KGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVDP-V-FEGL--EGGVGSLVKWNPVAN 156 (361)
Q Consensus 81 ~~~~~~~~~~~~~cc~~~K~~pl~~~~~~~~~~i~G~R~~Es~~~R~~~~~~~~~~-~-~~~~--~~~~~~~~~~~Pi~~ 156 (361)
.+ .+....|...+-..+.+.+++.+.+++|+.++|.. ....+....... . ..+. ....++...++||++
T Consensus 86 ~~------~~~e~~aR~~Ry~~l~~~a~~~~~i~tgH~~dD~a-Et~L~~l~RG~g~~gL~gm~~~~~~~~~~iiRPLl~ 158 (433)
T 1ni5_A 86 EG------LGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQC-ETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLA 158 (433)
T ss_dssp SS------STTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHHH-HHHHHHHTTTCCTTGGGCCCSEEEETTEEEECGGGS
T ss_pred CC------CCHHHHHHHHHHHHHHHHHhhCCeEEeeccchHHH-HHHHHHHHcCCCcccccCCCCccccCCceEEccCcc
Confidence 11 13344566666667777776778999999999853 211111100000 0 0000 000013557899999
Q ss_pred CcHHHHHHHHHhCCCCCCc
Q 018045 157 VKGNDIWNFLRTMDVPINS 175 (361)
Q Consensus 157 W~~~dv~~yi~~~~lp~~~ 175 (361)
++.+||.+|...++||+..
T Consensus 159 ~~k~eI~~y~~~~gl~~~~ 177 (433)
T 1ni5_A 159 RTRGELVQWARQYDLRWIE 177 (433)
T ss_dssp CCHHHHHHHHHHTTCCCBC
T ss_pred CCHHHHHHHHHHcCCCeEE
Confidence 9999999999999999854
No 159
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=99.36 E-value=9.5e-13 Score=123.75 Aligned_cols=150 Identities=16% Similarity=0.224 Sum_probs=97.6
Q ss_pred CcEEEEecchHHHHHH-HHHHHc-CCCceEEEccCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHH----HHHHhcC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQ----ALVRSKG 82 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~-~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~-~i~~~~p~~~~~~----~~~~~~~ 82 (361)
++++|++|||+||+++ +++.+. +.++.++++|+|. ++.+++++++++++|+ ++.++........ ..+....
T Consensus 1 ~kVvva~SGG~DSsvll~ll~~~~g~~V~av~vd~g~--~~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~~ 78 (400)
T 1kor_A 1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQ--GEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGA 78 (400)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSC--SSCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTC
T ss_pred CcEEEEEeChHHHHHHHHHHHHhhCCcEEEEEEeCCC--HHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHhhHHHHHcCC
Confidence 4799999999999776 888776 8889999999997 6779999999999999 6877654422111 1122211
Q ss_pred CCC--CC--ccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCcc
Q 018045 83 LFS--FY--EDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVAN 156 (361)
Q Consensus 83 ~~~--~~--~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~ 156 (361)
.+. .. ....+.|.. ..+.++++ +.+++++|.+++.....|......... +..-.++||.+
T Consensus 79 ~~e~~y~~g~~~~R~~~~----~~L~~~A~~~G~~~IatG~~~d~nDq~~f~~g~~~l~----------p~l~ii~PL~~ 144 (400)
T 1kor_A 79 VYEGYYLLGTSIARPLIA----KHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALK----------PDIKVIAPWRE 144 (400)
T ss_dssp CBTTTBCCTTTTHHHHHH----HHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGT
T ss_pred ccccccccCCccchHHHH----HHHHHHHHHcCCCEEEECCCCCcccHHHHHHHHHhcC----------CCCEEEEeecc
Confidence 100 00 011222332 34455554 678999999996111123211111111 12345999999
Q ss_pred C---cHHHHHHHHHhCCCCCCc
Q 018045 157 V---KGNDIWNFLRTMDVPINS 175 (361)
Q Consensus 157 W---~~~dv~~yi~~~~lp~~~ 175 (361)
| +.+||++|++.+|||+..
T Consensus 145 ~~~~tK~eI~~ya~~~gip~~~ 166 (400)
T 1kor_A 145 WSFQGRKEMIAYAEAHGIPVPV 166 (400)
T ss_dssp CCCCSHHHHHHHHHHTTCCCC-
T ss_pred cccCCHHHHHHHHHHcCCCccc
Confidence 9 999999999999999864
No 160
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=99.36 E-value=3.2e-12 Score=123.15 Aligned_cols=157 Identities=17% Similarity=0.145 Sum_probs=107.0
Q ss_pred CcEEEEecchHHHHHH-HHHHH----cCCCceEEEccCCCC---cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhc
Q 018045 10 NDIAIAFSGAEDVALI-EYAHL----TGRPFRVFSLDTGRL---NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSK 81 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~----~~~~i~v~~~dtg~~---~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~ 81 (361)
++++|++|||+||++| +++.+ .+.++.++|+|.|.. .++..++++++++++|+++.++.-+... +....
T Consensus 19 ~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~~~~~~---~~~~~ 95 (464)
T 3a2k_A 19 AAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPA---FQRSA 95 (464)
T ss_dssp SBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECCCHH---HHTTT
T ss_pred CEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEEechhh---hhhcc
Confidence 6899999999999877 77776 567889999999975 2467889999999999999888665332 22222
Q ss_pred CCCCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCC-C-CcCC--cCCCCCeEEEeeCc
Q 018045 82 GLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDP-V-FEGL--EGGVGSLVKWNPVA 155 (361)
Q Consensus 82 ~~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~-~-~~~~--~~~~~~~~~~~Pi~ 155 (361)
+. +....|...+...+.++++ +.+.+++|+.++|.. ....+....... . ..+. ....++...++||+
T Consensus 96 ~~------~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~dD~a-Et~L~~l~rG~g~~gL~gm~~~~~~~~~~iiRPLl 168 (464)
T 3a2k_A 96 GL------GAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQV-ETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFL 168 (464)
T ss_dssp TC------CSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHHHHH-HHHHHHHHHCCCSSSTTCSCSEEECSSSEEECGGG
T ss_pred CC------CHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChHHHH-HHHHHHHHcCCCcccccCCCccccCCCCEEECCCc
Confidence 21 3345567777777777776 567999999999853 211111100000 0 0000 00001235689999
Q ss_pred cCcHHHHHHHHHhCCCCCCcc
Q 018045 156 NVKGNDIWNFLRTMDVPINSL 176 (361)
Q Consensus 156 ~W~~~dv~~yi~~~~lp~~~l 176 (361)
+++.+||.+|+..+|||+..-
T Consensus 169 ~~~k~eI~~ya~~~gl~~~~d 189 (464)
T 3a2k_A 169 AVSRAEIEAYCRQMGLSPRCD 189 (464)
T ss_dssp GSCHHHHHHHHHHTCCSSCSC
T ss_pred cCcHHHHHHHHHHcCCCeEEC
Confidence 999999999999999998653
No 161
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.35 E-value=3.8e-12 Score=103.77 Aligned_cols=84 Identities=19% Similarity=0.340 Sum_probs=72.0
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc---------------------------CCCchHHHHHcC
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------------------------DGDQKEYAKQKL 322 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~---------------------------~~~~~~l~~~~~ 322 (361)
++++|.||++||++|+.+.|.+.++++.+ + +.|+.|++ +.. ..++ +.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~--v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~-~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G--VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP-HEVA-ARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C--CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH-HHHH-TTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C--CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch-HHHH-HHh
Confidence 89999999999999999999999999999 4 88999998 244 7888 899
Q ss_pred CCCCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 QLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|.++|++++++ +|+ ....+.| ..+.++|.++|+++
T Consensus 106 ~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGK-VVALFAG-RAGREALLDALLLA 142 (154)
T ss_dssp SBCSSCEEEEECTTSE-EEEEEES-BCCHHHHHHHHHHT
T ss_pred CCCcccEEEEECCCCC-EEEEEcC-CCCHHHHHHHHHhc
Confidence 999999999995 554 3445555 68999999999875
No 162
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.34 E-value=4e-12 Score=105.03 Aligned_cols=87 Identities=14% Similarity=0.257 Sum_probs=73.1
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------CCc---------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------GDQ--------------- 314 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------~~~--------------- 314 (361)
.++++||.||++||++|+.+.|.+.++.+.++ ++.|+.|+++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 57999999999999999999999999999998 5999999998 330
Q ss_pred ------hHHHHHcCCCCCCCeEEEEe-CCCCCeeecCCCCC-CHHHHHHHHHHhC
Q 018045 315 ------KEYAKQKLQLGSFPTILFFP-KHSSKPIKYPSERR-DVDSLMAFVDALR 361 (361)
Q Consensus 315 ------~~l~~~~~~v~~~Pt~~~~~-~g~~~~~~~~~~~~-~~~~l~~~i~~~~ 361 (361)
..++ +.|+|.++|++++++ +|+ ... .| .. +.++|.++|+++.
T Consensus 114 ~~~~d~~~~~-~~~~v~~~P~~~lid~~G~--i~~-~g-~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 114 IMVMDDGSLV-EKFNVRSIDYIVIMDKSSN--VLY-AG-TTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEEECCSHHH-HHTTCCSSSEEEEEETTCC--EEE-EE-ESCCHHHHHHHHHHC-
T ss_pred eEEeChHHHH-HHhCCCCceEEEEEcCCCc--EEE-eC-CCCCHHHHHHHHHHHh
Confidence 1678 899999999999995 455 344 44 67 8999999998863
No 163
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.34 E-value=5.2e-12 Score=101.85 Aligned_cols=74 Identities=15% Similarity=0.204 Sum_probs=63.0
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------chHHHHHcCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~-----------------------~~~l~~~~~~ 323 (361)
.++++||+||++||++|+.+.|.++++++.+++ .++.++.|+++.. ...++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT-TGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHH-HHcC
Confidence 578999999999999999999999999999984 4799999999863 14688 8999
Q ss_pred CCCCCeEEEEe--CCCCCeeecC
Q 018045 324 LGSFPTILFFP--KHSSKPIKYP 344 (361)
Q Consensus 324 v~~~Pt~~~~~--~g~~~~~~~~ 344 (361)
|.++|++++++ +|+ .+...
T Consensus 106 v~~~P~~~lid~~~G~--i~~~~ 126 (144)
T 1i5g_A 106 VKSIPTLVGVEADSGN--IITTQ 126 (144)
T ss_dssp CCSSSEEEEEETTTCC--EEESC
T ss_pred CCCCCEEEEEECCCCc--EEecc
Confidence 99999999997 565 44443
No 164
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.33 E-value=3.8e-12 Score=103.71 Aligned_cols=93 Identities=18% Similarity=0.295 Sum_probs=73.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------hHHHHHcCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------KEYAKQKLQLG 325 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----------------------~~l~~~~~~v~ 325 (361)
.+++++|.||++||++|+.+.|.+.++.+.+++.++.|+.|+++.+. ..++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVG-KLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHH-HHhCCC
Confidence 57899999999999999999999999999998767999999998741 2377 889999
Q ss_pred CCCeEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHhC
Q 018045 326 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDALR 361 (361)
Q Consensus 326 ~~Pt~~~~~~g~~~~~~~~~~-~~~~~~l~~~i~~~~ 361 (361)
++|+++++...+.....+.|. ..+.+++.++|+++.
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 106 GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-
T ss_pred CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHH
Confidence 999888885444333444442 247789999998763
No 165
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=1.5e-11 Score=99.94 Aligned_cols=87 Identities=14% Similarity=0.226 Sum_probs=71.7
Q ss_pred CCCcEEEEEECCCChh--HHhhHHHHHHHHHHh-cCCCeEEEEEEcCCCc------------------------hHHHHH
Q 018045 268 RQEPWLVVLYAPWCQF--CQAMEGSYVELADKL-AGNGVKVGKFRADGDQ------------------------KEYAKQ 320 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~--C~~~~p~~~~la~~~-~~~~v~~~~vd~~~~~------------------------~~l~~~ 320 (361)
.+++++|+||++||++ |+.+.|.+.++.+.+ ++.++.|+.|+++... ..++ +
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA-K 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-H
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH-H
Confidence 5789999999999999 999999999999999 6656999999998761 2788 8
Q ss_pred cCCCCCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 321 KLQLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 321 ~~~v~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.|+|.++|++++++ +|+ .+... .+.++|.+.|+++
T Consensus 111 ~~~v~~~P~~~lid~~G~--i~~~~---~~~~~l~~~l~~l 146 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGK--ILAKN---LRGEELKKKIENI 146 (150)
T ss_dssp HTTCCSSSEEEEECTTSB--EEEES---CCHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCE--EEEcc---CCHHHHHHHHHHH
Confidence 99999999999995 554 33322 2678888888765
No 166
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.32 E-value=8e-12 Score=116.77 Aligned_cols=106 Identities=9% Similarity=0.167 Sum_probs=89.9
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCchHHHHHcCCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~v~~ 326 (361)
+.|.+++.+++..+.. ...++++|+||++||++|+.+.|.|+++++.+++ .+.|+.||++ .+ ..++ +.|+|.+
T Consensus 117 p~v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~-~i~f~~vd~~~~~~-~~~~-~~fgi~~ 191 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFIFIDSDHTDN-QRIL-EFFGLKK 191 (361)
T ss_dssp CSEEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-TCEEEEECTTSGGG-HHHH-HHTTCCT
T ss_pred CcceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-ceEEEEecCChHHH-HHHH-HHcCCCc
Confidence 4688999999998875 2345789999999999999999999999999998 7999999999 56 8999 9999988
Q ss_pred --CCeEEEEeCCCCCeeecC--CCCCCHHHHHHHHHHh
Q 018045 327 --FPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 --~Pt~~~~~~g~~~~~~~~--~~~~~~~~l~~~i~~~ 360 (361)
+|++++|..|+. ...|. ++..+.++|.+|++++
T Consensus 192 ~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~ 228 (361)
T 3uem_A 192 EECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRF 228 (361)
T ss_dssp TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHH
T ss_pred cCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHH
Confidence 999999988553 34443 4479999999999864
No 167
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.32 E-value=4.5e-12 Score=103.43 Aligned_cols=87 Identities=14% Similarity=0.179 Sum_probs=69.0
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------chHHHHHcCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 325 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~v~ 325 (361)
.+++++|.||++||++|+.+.|.++++++. + ++.|+.|+++.. +..++ +.|+|.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS-IEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH-HHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH-HhcCcC
Confidence 578999999999999999999999999876 3 689999886532 15778 889999
Q ss_pred CCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 326 SFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|+++++ ++|+ ....+.| ..+.++|.++|+++
T Consensus 117 ~~P~~~~id~~G~-i~~~~~g-~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 117 GVPETFVVGREGT-IVYKLVG-PITPDNLRSVLLPQ 150 (156)
T ss_dssp SSCEEEEECTTSB-EEEEEES-CCCHHHHHHTHHHH
T ss_pred ccCeEEEEcCCCC-EEEEEeC-CCCHHHHHHHHHHH
Confidence 99987777 5555 2344555 67888888888764
No 168
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=99.32 E-value=1e-11 Score=116.10 Aligned_cols=161 Identities=11% Similarity=0.063 Sum_probs=108.0
Q ss_pred CCcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHHH----
Q 018045 9 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEVQ---- 75 (361)
Q Consensus 9 ~~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~--------~pet~~~v~~~~~~~g~~i~~~~p~~~~~~---- 75 (361)
+++++|++|||+||+++ +|+.+.+.++..+|++++.+ .++..+.++++++++|++++++........
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~~~~~~~~v~~ 88 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKEYWDRVFE 88 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHH
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeChHHHHHHHHH
Confidence 36899999999999877 88888888999999999853 357789999999999999998865432211
Q ss_pred HHHHh--cCCCCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCC-Cceec-CC----CCcCCcCCC
Q 018045 76 ALVRS--KGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEI-PVVQV-DP----VFEGLEGGV 145 (361)
Q Consensus 76 ~~~~~--~~~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~-~~~~~-~~----~~~~~~~~~ 145 (361)
.++.. .|.. + .....|...+|...+.++++ +.+.++||+.+++.. .+... ..... +. .|.-.....
T Consensus 89 ~~l~~y~~G~t--p-npc~~C~r~ik~~~l~~~A~~~G~d~IatGH~a~d~~-~~~~~~~l~rg~d~~kdqsyfL~~l~~ 164 (376)
T 2hma_A 89 YFLAEYRAGRT--P-NPDVMCNKEIKFKAFLDYAITLGADYVATGHYARVAR-DEDGTVHMLRGVDNGKDQTYFLSQLSQ 164 (376)
T ss_dssp HHHHHHHTTCC--C-CHHHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEE-CSSSCEEEEECSSTTTCCGGGGTTCCH
T ss_pred HHHHHHhcCCC--C-ChHHHHHHHHHHHHHHHHHHhCCCCEEEECcchhhhh-CCCchhhhhhccccccccchhccCCCh
Confidence 11222 2221 1 12335667788888887776 667999999888741 11111 11111 10 000000000
Q ss_pred -CCeEEEeeCccCcHHHHHHHHHhCCCCC
Q 018045 146 -GSLVKWNPVANVKGNDIWNFLRTMDVPI 173 (361)
Q Consensus 146 -~~~~~~~Pi~~W~~~dv~~yi~~~~lp~ 173 (361)
.....++||.+++..||.+|++++|||+
T Consensus 165 ~~l~~~i~PL~~~~K~eVr~~A~~~gl~~ 193 (376)
T 2hma_A 165 EQLQKTMFPLGHLEKPEVRRLAEEAGLST 193 (376)
T ss_dssp HHHTTEECTTTTCCHHHHHHHHHHTTCTT
T ss_pred hhcCcEEecCcCCCHHHHHHHHHHcCCCc
Confidence 0123689999999999999999999985
No 169
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.32 E-value=4e-12 Score=105.35 Aligned_cols=85 Identities=19% Similarity=0.336 Sum_probs=67.7
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-----------------------CCCchHHHHHcCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA-----------------------DGDQKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~-----------------------~~~~~~l~~~~~~v 324 (361)
.+++++|+||++||++|+.+.|.++++++. ++.|+.|++ +.+ ..++ +.|+|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGD-GMLG-LDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcc-hHHH-HHcCc
Confidence 689999999999999999999999999876 477888874 444 6788 89999
Q ss_pred CCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++|+++++. +|+ ....+.| ..+.++|.++|+++
T Consensus 124 ~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 124 YGAPETFLIDGNGI-IRYRHAG-DLNPRVWEEEIKPL 158 (168)
T ss_dssp CSSSEEEEECTTSB-EEEEEES-CCCHHHHHHTTHHH
T ss_pred cccCEEEEECCCCe-EEEEEeC-CCCHHHHHHHHHHH
Confidence 9999776664 555 2344555 68889988888764
No 170
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.31 E-value=5.1e-12 Score=101.84 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=70.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc-------------------------hHHHHHcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-------------------------KEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~-------------------------~~l~~~~~ 322 (361)
.+++++|+||++||++|+.+.|.+.++.+.+++.++.|+.|+++.+. ..++ +.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELY-KKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHH-HHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHH-HHc
Confidence 57899999999999999999999999999998657999999988541 2467 789
Q ss_pred CCCCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 QLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+|.++|++++++ +|+ .+... .+.++|.++|+++
T Consensus 110 ~v~~~P~~~lid~~G~--i~~~~---~~~~~l~~~l~~i 143 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGV--IIAAN---VTPEKLTEILKAI 143 (143)
T ss_dssp TGGGCCCEEEECTTSB--EEEES---CCHHHHHHHHTC-
T ss_pred CCCCCCcEEEECCCCE--EEEcc---CCHHHHHHHHHhC
Confidence 999999999997 454 33332 4578888888754
No 171
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.30 E-value=1.8e-11 Score=99.68 Aligned_cols=99 Identities=14% Similarity=0.234 Sum_probs=76.9
Q ss_pred ccHHHHHhhc-CCCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCc-hHHHHHcCCCCCCCeEE
Q 018045 257 TGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ-KEYAKQKLQLGSFPTIL 331 (361)
Q Consensus 257 ~~f~~~~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~~-~~l~~~~~~v~~~Pt~~ 331 (361)
.+|++.+... ..+|++||+||++||..|+.|.... .++++.++. ++.++++|.+..+ ..+. ++|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~~~l~-~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEGQRYI-QFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHHHHHH-HHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhHHHHH-HHcCCCCCCEEE
Confidence 5677766433 3589999999999999999998765 667777755 6999999997642 4678 899999999999
Q ss_pred EEeC--CCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 332 FFPK--HSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 332 ~~~~--g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
|+.. |+. .... ++ .++++|.++|+++
T Consensus 107 fld~~~G~~-l~~~-~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 107 ILDPRTGQK-LVEW-HQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp EECTTTCCC-CEEE-SS-CCHHHHHHHHHHH
T ss_pred EEeCCCCcE-eeec-CC-CCHHHHHHHHHHH
Confidence 9965 433 3333 44 8999999988764
No 172
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.29 E-value=1.2e-11 Score=99.99 Aligned_cols=69 Identities=16% Similarity=0.288 Sum_probs=60.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------chHHHHHcCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~-----------------------~~~l~~~~~~ 323 (361)
.+++++|+||++||++|+.+.|.++++++.+++ .++.++.|+++.. +..++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLS-KHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHH-HHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHH-HHhC
Confidence 578999999999999999999999999999983 4799999999864 14688 8999
Q ss_pred CCCCCeEEEEe--CCC
Q 018045 324 LGSFPTILFFP--KHS 337 (361)
Q Consensus 324 v~~~Pt~~~~~--~g~ 337 (361)
|.++|++++++ +|+
T Consensus 106 v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 VESIPTLIGVDADSGD 121 (146)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCe
Confidence 99999999998 665
No 173
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.29 E-value=1.2e-11 Score=99.54 Aligned_cols=75 Identities=17% Similarity=0.290 Sum_probs=63.3
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------chHHHHHcCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~-----------------------~~~l~~~~~~ 323 (361)
.+++++|+||++||++|+.+.|.+.++++.+++ .++.++.|+++.. ...++ +.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELG-KTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHH-HHcC
Confidence 578999999999999999999999999999983 3799999999874 14678 8999
Q ss_pred CCCCCeEEEEe--CCCCCeeecCC
Q 018045 324 LGSFPTILFFP--KHSSKPIKYPS 345 (361)
Q Consensus 324 v~~~Pt~~~~~--~g~~~~~~~~~ 345 (361)
|.++|++++++ +|+ .+...+
T Consensus 106 v~~~Pt~~lid~~~G~--i~~~~~ 127 (144)
T 1o73_A 106 VESIPTLITINADTGA--IIGTQA 127 (144)
T ss_dssp CCSSSEEEEEETTTCC--EEESCH
T ss_pred CCCCCEEEEEECCCCe--EEecch
Confidence 99999999998 565 454443
No 174
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=99.28 E-value=2.8e-11 Score=106.01 Aligned_cols=178 Identities=14% Similarity=0.137 Sum_probs=103.6
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCc-EEEEcCCh-HHHH-HHHHhcC--C
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDA-VEVQ-ALVRSKG--L 83 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~-i~~~~p~~-~~~~-~~~~~~~--~ 83 (361)
++++|++|||+||+++ +++.+.+.++.++++|.|....+-.++++++++++|++ ++++.-+. ..+. ..+.... .
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~~~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~~~~l~~~~~~~l~~~~~~v 82 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPV 82 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTSHHHHHHTTCCC
T ss_pred CCEEEEecCcHHHHHHHHHHHHcCCCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEeChhHHHHhhhhcccccccc
Confidence 5799999999999876 88888777788899999976667789999999999999 88876541 1111 1111111 1
Q ss_pred CC--CCcc-chhchhhcccc--HHH-HHHHc--cCCEEEEeeeccCCccCccCCC----ceecCCCCcCCcCCCCCeEEE
Q 018045 84 FS--FYED-GHQECCRVRKV--RPL-RRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKW 151 (361)
Q Consensus 84 ~~--~~~~-~~~~cc~~~K~--~pl-~~~~~--~~~~~i~G~R~~Es~~~R~~~~----~~~~~~~~~~~~~~~~~~~~~ 151 (361)
+. .... .+..|...++. ..+ ..+.+ +.+.+++|+.++|....+...+ .+.....+. ...+...+
T Consensus 83 ~~~~~~~~~~~~~~~~~R~~~~~~la~~~A~~~g~~~I~~G~~~~D~~~~~~~r~~~~~~~~~~~~~~----~~~~~~i~ 158 (232)
T 2pg3_A 83 PDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLG----IARDIRFE 158 (232)
T ss_dssp CC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHHHH----HTSCCEEE
T ss_pred cccccccCCCCCCeEechHHHHHHHHHHHHHHcCcCEEEEccCccccCCCCCCCHHHHHHHHHHHHHh----CCCCeEEE
Confidence 00 0001 11122111111 111 22222 6789999999998631121100 000000000 00134568
Q ss_pred eeCccCcHHHHHHHHHhCCC-CC--CccccC--CCCCCCCCCCCC
Q 018045 152 NPVANVKGNDIWNFLRTMDV-PI--NSLHSQ--GYISIGCEPCTR 191 (361)
Q Consensus 152 ~Pi~~W~~~dv~~yi~~~~l-p~--~~lY~~--g~~~~GC~~Ct~ 191 (361)
+||.+|++.||++|.+++|+ |+ ..-+.+ |-...+|-.|+.
T Consensus 159 ~PL~~~~K~ei~~~a~~~gl~~~~~~~t~sC~~~~~~~~CG~C~~ 203 (232)
T 2pg3_A 159 TPLMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAA 203 (232)
T ss_dssp CTTTTCCHHHHHHHHHHTTCHHHHHHHCCCCTTSCCTTTTSCSHH
T ss_pred EecCCCCHHHHHHHHHHcCCCcccccccCCCcCCCCCCcCCcCHh
Confidence 99999999999999999999 64 222222 111256766653
No 175
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.26 E-value=2.2e-11 Score=103.50 Aligned_cols=90 Identities=18% Similarity=0.290 Sum_probs=72.2
Q ss_pred CCC-cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCchHH
Q 018045 268 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEY 317 (361)
Q Consensus 268 ~~~-~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----------------------------~~~~~l 317 (361)
.++ ++||+||++||++|+.+.|.++++.+++++.++.|+.|+++ .+ ..+
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~ 122 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDET-QEV 122 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-CHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCc-hHH
Confidence 455 59999999999999999999999999998656999999984 33 578
Q ss_pred HHHcCCCCCCCeEEEEe-CCCCCeeec--------CCCCCCHHHHHHHHHHh
Q 018045 318 AKQKLQLGSFPTILFFP-KHSSKPIKY--------PSERRDVDSLMAFVDAL 360 (361)
Q Consensus 318 ~~~~~~v~~~Pt~~~~~-~g~~~~~~~--------~~~~~~~~~l~~~i~~~ 360 (361)
+ +.|+|.++|++++++ +|+. .... ..+..+.++|.+.|+++
T Consensus 123 ~-~~~~v~~~P~~~lid~~G~i-~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 123 A-KAYDAACTPDFYIFDRDLKC-VYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp H-HHHTCCEESEEEEEETTCBE-EEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred H-HHhCCCCCCeEEEEcCCCeE-EEccccCcccccccCccCHHHHHHHHHHH
Confidence 8 899999999999995 5542 2221 12356889999998875
No 176
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.26 E-value=3e-11 Score=111.97 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=74.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC---------------------------CchHHHHH
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG---------------------------DQKEYAKQ 320 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~---------------------------~~~~l~~~ 320 (361)
.++++||+||++||++|+.+.|.++++++++++.++.|+.|+++. + ..++ +
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~-~~l~-~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNN-YATW-T 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTT-SHHH-H
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCc-HHHH-H
Confidence 478999999999999999999999999999986569999998753 2 4688 8
Q ss_pred cCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 321 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 321 ~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.|+|.++|++++++..+.....+.| ..+.++|.++|+++
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G-~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFG-EGDYNVTETLVRQL 197 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEES-BCCHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 9999999999999444333444555 67899999999875
No 177
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.26 E-value=2.9e-11 Score=100.10 Aligned_cols=74 Identities=16% Similarity=0.315 Sum_probs=63.2
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCc-----------------------hHHHHHcCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQ-----------------------KEYAKQKLQ 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~-----------------------~~l~~~~~~ 323 (361)
.++++||+||++||++|+.+.|.++++++.+++ .++.|+.|+++... ..++ +.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALT-KKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHH-HHcC
Confidence 578999999999999999999999999999985 47999999988761 4678 8999
Q ss_pred CCCCCeEEEEeC--CCCCeeecC
Q 018045 324 LGSFPTILFFPK--HSSKPIKYP 344 (361)
Q Consensus 324 v~~~Pt~~~~~~--g~~~~~~~~ 344 (361)
|.++|++++++. |+ .+...
T Consensus 126 v~~~Pt~~lid~~~G~--iv~~~ 146 (165)
T 3s9f_A 126 VESIPTLIGLNADTGD--TVTTR 146 (165)
T ss_dssp CCSSSEEEEEETTTCC--EEESC
T ss_pred CCCCCEEEEEeCCCCE--EEecc
Confidence 999999999974 55 44443
No 178
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.26 E-value=6.1e-11 Score=99.23 Aligned_cols=86 Identities=20% Similarity=0.303 Sum_probs=68.3
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------CchHHHHHcCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----------------------DQKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-----------------------~~~~l~~~~~~v 324 (361)
.++++||+||++||++|+.+.|.++++++. ++.|+.|+++. + ..++ +.|+|
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 130 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDAD-GTLG-LDLGV 130 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETT-CHHH-HHHTC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCc-chHH-HHcCC
Confidence 578999999999999999999999999876 48888888533 3 5677 78999
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 325 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++|++++++..+.....+.| ..+.+++.++|+++
T Consensus 131 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 131 YGAPETYLIDKQGIIRHKIVG-VVDQKVWREQLAPL 165 (176)
T ss_dssp CSSCEEEEECTTCBEEEEEES-CCCHHHHHHHTHHH
T ss_pred CCCCeEEEECCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 999988888544433445555 67888888887754
No 179
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=99.22 E-value=1.6e-11 Score=114.78 Aligned_cols=159 Identities=11% Similarity=0.095 Sum_probs=104.3
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHH----HH
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEV----QA 76 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~--------~pet~~~v~~~~~~~g~~i~~~~p~~~~~----~~ 76 (361)
++++|++|||+||+++ +|+.+.+.++..+|+|++.+ .++..+.++++++++|+++.++....... ..
T Consensus 18 ~kVvVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~~~~f~~~v~~~ 97 (380)
T 2der_A 18 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFEL 97 (380)
T ss_dssp CEEEEECCSCSTTHHHHHHHHTTCCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHHH
T ss_pred CEEEEEEEChHHHHHHHHHHHHcCCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeCcHHHHHHHHHH
Confidence 6899999999999777 88888888999999998754 35678999999999999999886543211 11
Q ss_pred HHHh--cCCCCCCccchhchhhccccHHHHHHHc---cCCEEEEeeeccCCcc-CccCCCcee-cCC----CCcCCcCCC
Q 018045 77 LVRS--KGLFSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPG-TRSEIPVVQ-VDP----VFEGLEGGV 145 (361)
Q Consensus 77 ~~~~--~~~~~~~~~~~~~cc~~~K~~pl~~~~~---~~~~~i~G~R~~Es~~-~R~~~~~~~-~~~----~~~~~~~~~ 145 (361)
++.. .|.. + .....|....|...+.+.+. +.+.++||+.+++... .|. ..+. .+. .|.-..-..
T Consensus 98 ~~~ey~~G~t--p-npc~~Cnr~ik~~~l~~~A~~~~Gad~IatGH~a~d~~~~~~~--~l~rg~~~~kdqsy~L~~l~~ 172 (380)
T 2der_A 98 FLAEYKAGRT--P-NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKS--RLLRGLDSNKDQSYFLYTLSH 172 (380)
T ss_dssp HHHHHHTTCC--C-CHHHHHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEEEETTEE--EEECCSSTTTCCGGGGSSCCH
T ss_pred HHHHHHcCCC--C-ChhHHHHHHHHHHHHHHHHHhhcCCCEEEEccccccccccchH--HHhcccccccccceeecCCCh
Confidence 1222 2221 1 12234556668777776654 5679999998886310 111 1111 010 010000000
Q ss_pred CC-eEEEeeCccCcHHHHHHHHHhCCCCC
Q 018045 146 GS-LVKWNPVANVKGNDIWNFLRTMDVPI 173 (361)
Q Consensus 146 ~~-~~~~~Pi~~W~~~dv~~yi~~~~lp~ 173 (361)
.. ...++||.++++.||.+|++++|||+
T Consensus 173 ~~l~~~i~PL~~~~K~eVr~~A~~~Gl~~ 201 (380)
T 2der_A 173 EQIAQSLFPVGELEKPQVRKIAEDLGLVT 201 (380)
T ss_dssp HHHHHEECCGGGSCHHHHHHHHHHTTCC-
T ss_pred hhcceeEccCCCCCHHHHHHHHHHcCCCC
Confidence 01 34799999999999999999999985
No 180
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.20 E-value=8.3e-11 Score=99.09 Aligned_cols=92 Identities=22% Similarity=0.383 Sum_probs=71.2
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----hHHHHHcCCCC------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLG------------------ 325 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----~~l~~~~~~v~------------------ 325 (361)
.+++++|+||++||++|+.+.|.++++.+.+++.++.++.|+++..+ ..+. +++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~ 137 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFL-KEANLTRLGYFNDQKAKVFQDLKA 137 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHH-HHTTCCTTCCEECTTCHHHHHHHT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHH-HHcCCCCCceEECCcchHHHHhcc
Confidence 57899999999999999999999999999998557999999988641 3555 666664
Q ss_pred -----CCCeEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHh
Q 018045 326 -----SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 360 (361)
Q Consensus 326 -----~~Pt~~~~~~g~~~~~~~~~~-~~~~~~l~~~i~~~ 360 (361)
++|++++++..+.....+.|. ..+.++|.++|+++
T Consensus 138 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 138 IGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 899999995443334445552 12478899998875
No 181
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.19 E-value=4.9e-11 Score=100.71 Aligned_cols=87 Identities=21% Similarity=0.318 Sum_probs=70.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCchHHH
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEYA 318 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----------------------------~~~~~l~ 318 (361)
.++++||+||++||++|+.+.|.++++.+++++. +.|+.|+++ .+ ..++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET-QEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-SHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc-chHH
Confidence 5789999999999999999999999999999884 999999984 33 5788
Q ss_pred HHcCCCCCCCeEEEEe-CCCCCeeecCCC---------CCCHHHHHHHHHHh
Q 018045 319 KQKLQLGSFPTILFFP-KHSSKPIKYPSE---------RRDVDSLMAFVDAL 360 (361)
Q Consensus 319 ~~~~~v~~~Pt~~~~~-~g~~~~~~~~~~---------~~~~~~l~~~i~~~ 360 (361)
+.|+|.++|++++++ +|+ .+.. |. ..+.++|.+.|+++
T Consensus 110 -~~~~v~~~P~~~lid~~G~--i~~~-g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 110 -KAYRALRTPEVFLFDERRL--LRYH-GRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp -HHTTCCEESEEEEECTTCB--EEEE-ECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred -HHcCCCCCCeEEEECCCCc--EEEE-EecCCccccccccCHHHHHHHHHHH
Confidence 899999999999995 454 3332 21 23678888888765
No 182
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.19 E-value=5.6e-11 Score=104.84 Aligned_cols=93 Identities=14% Similarity=0.324 Sum_probs=75.7
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCC--ChhHHhhHHHHHHHHHHh---cCCC--eEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKL---AGNG--VKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~w--C~~C~~~~p~~~~la~~~---~~~~--v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
++|.+++. +-.++++|.||++| |++|+.+.|.++++++.+ ++ + +.|+.+|++.+ ++++ ++|+|.++||
T Consensus 15 ~ql~~~~~--~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~-~~~v~~~~vd~d~~-~~~~-~~~gv~~~Pt 89 (243)
T 2hls_A 15 RELRETLA--EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNG-GKLLKLNVYYRESD-SDKF-SEFKVERVPT 89 (243)
T ss_dssp HHHHHHHT--TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETT-EESEEEEEEETTTT-HHHH-HHTTCCSSSE
T ss_pred HHHHHHHH--hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCC-CceeEEEEecCCcC-HHHH-HhcCCCcCCE
Confidence 44555554 34689999999999 999999999999999884 22 2 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
+++| +| ...|.| ..+..++..|+..
T Consensus 90 ~~i~-~g---~~~~~G-~~~~~~l~~fv~~ 114 (243)
T 2hls_A 90 VAFL-GG---EVRWTG-IPAGEEIRALVEV 114 (243)
T ss_dssp EEET-TT---TEEEES-CCCTTHHHHHHHH
T ss_pred EEEE-CC---ceeEcC-CCcHHHHHHHHHH
Confidence 9999 55 466666 4566677777664
No 183
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.19 E-value=7.4e-11 Score=102.30 Aligned_cols=89 Identities=19% Similarity=0.366 Sum_probs=71.2
Q ss_pred CCC-cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCchHH
Q 018045 268 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEY 317 (361)
Q Consensus 268 ~~~-~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----------------------------~~~~~l 317 (361)
.++ ++||+||++||++|+.+.|.++++++++++.++.|+.|+++ .. ..+
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~-~~~ 135 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDAS-QSV 135 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTT-CHH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCc-cHH
Confidence 456 59999999999999999999999999998756999999994 33 578
Q ss_pred HHHcCCCCCCCeEEEEeCCCCCeeecCC----------CCCCHHHHHHHHHHh
Q 018045 318 AKQKLQLGSFPTILFFPKHSSKPIKYPS----------ERRDVDSLMAFVDAL 360 (361)
Q Consensus 318 ~~~~~~v~~~Pt~~~~~~g~~~~~~~~~----------~~~~~~~l~~~i~~~ 360 (361)
+ +.|+|.++|++++++..+. .+ +.| +..+.++|.+.|+++
T Consensus 136 ~-~~~~v~~~P~~~liD~~G~-i~-~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 136 A-KAYGAACTPDFFLYDRERR-LV-YHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp H-HHHTCCEESEEEEECTTCB-EE-EEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred H-HHcCCCCCCeEEEECCCCc-EE-EeccccccccccccccCHHHHHHHHHHH
Confidence 8 8999999999999954432 22 322 234678898888765
No 184
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.81 E-value=2e-12 Score=103.96 Aligned_cols=75 Identities=12% Similarity=0.274 Sum_probs=60.7
Q ss_pred CCC-cEEEEEECCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCc------------------------hHHHHH
Q 018045 268 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQ------------------------KEYAKQ 320 (361)
Q Consensus 268 ~~~-~vlv~F~a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~------------------------~~l~~~ 320 (361)
.++ +++|+||++||++|+.+.|.++++++.++. .++.++.|+++... ..++ +
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 102 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVT-A 102 (143)
Confidence 466 999999999999999999999999999842 36888888887541 2678 8
Q ss_pred cCCCCCCCeEEEEe-CCCCCeeecCC
Q 018045 321 KLQLGSFPTILFFP-KHSSKPIKYPS 345 (361)
Q Consensus 321 ~~~v~~~Pt~~~~~-~g~~~~~~~~~ 345 (361)
.|+|.++|++++++ +|+ .+...+
T Consensus 103 ~~~v~~~P~~~lid~~G~--i~~~~~ 126 (143)
T 2lus_A 103 KYGITGIPALVIVKKDGT--LISMNG 126 (143)
Confidence 99999999999997 666 344443
No 185
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=2e-12 Score=106.17 Aligned_cols=88 Identities=10% Similarity=0.107 Sum_probs=66.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHH-HHHHhc-CCCeEEEEEEcCCCchHHHHHcC----------------------C
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVE-LADKLA-GNGVKVGKFRADGDQKEYAKQKL----------------------Q 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~-la~~~~-~~~v~~~~vd~~~~~~~l~~~~~----------------------~ 323 (361)
.+++++|.||++||++|+.+.|.+.+ +.+.++ +.++.++.|+++.. .+.. ++| +
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~-~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP-LEKV-LAFAKSTGVTYPLGLDPGADIFAKYA 109 (159)
Confidence 57899999999999999999999998 988887 44799999998876 4433 333 3
Q ss_pred --CCCCCeEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 324 --LGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 --v~~~Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+.++|+++++ ++|+. ...+.| .+.+++.++|+++
T Consensus 110 ~~~~~~P~~~lid~~G~i-~~~~~g--~~~~~l~~~l~~l 146 (159)
T 2ls5_A 110 LRDAGITRNVLIDREGKI-VKLTRL--YNEEEFASLVQQI 146 (159)
Confidence 5779999999 56652 333333 5677788887765
No 186
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.15 E-value=8.3e-12 Score=111.98 Aligned_cols=71 Identities=17% Similarity=0.312 Sum_probs=57.2
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------CCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPS 345 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~ 345 (361)
.+|+||||||++|++++|.|++++++++ .||++ ++ ++++ ++|+|+++||+++ +|+ . +.|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~-~~la-~~~gI~~vPT~~i--~G~--~--~~G 264 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR--T--YTG 264 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCC-CHHH-HTTTCCSTTEEEE--TTE--E--EES
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhH-HHHH-HHcCCcccCeEEE--CCE--E--ecC
Confidence 3799999999999999999999986542 34444 25 8999 9999999999655 665 2 666
Q ss_pred CCCCHHHHHHHHH
Q 018045 346 ERRDVDSLMAFVD 358 (361)
Q Consensus 346 ~~~~~~~l~~~i~ 358 (361)
.++.++|.+|++
T Consensus 265 -~~~~~~L~~~l~ 276 (291)
T 3kp9_A 265 -VRSLEALAVASG 276 (291)
T ss_dssp -CCCHHHHHHHTC
T ss_pred -CCCHHHHHHHHC
Confidence 799999999874
No 187
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.15 E-value=1.8e-10 Score=94.81 Aligned_cols=91 Identities=13% Similarity=0.075 Sum_probs=69.9
Q ss_pred CCCc-EEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC---------------------CCchHHHHHcCCC
Q 018045 268 RQEP-WLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD---------------------GDQKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~-vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~---------------------~~~~~l~~~~~~v 324 (361)
.++. ++|.|| ++||++|+...|.+.++++++++.++.|+.|++| .. ..++ +.|++
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPD-KKIR-ELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTT-SHHH-HHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCc-HHHH-HHcCC
Confidence 4666 999999 9999999999999999999998767999999987 34 6788 89999
Q ss_pred CC----CCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 018045 325 GS----FPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~----~Pt~~~~~~g~~~~~~~~~~---~~~~~~l~~~i~~~ 360 (361)
.+ +|++++++..+.....+.|. ..+.+++.+.|+++
T Consensus 105 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 105 KGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp CCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred CCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 99 99999996444333344441 23455666666554
No 188
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=99.14 E-value=7.2e-11 Score=104.06 Aligned_cols=143 Identities=10% Similarity=0.079 Sum_probs=93.8
Q ss_pred CcEEEEecchHHHHHH-HHHHHc-CCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFY 87 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~-~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~~ 87 (361)
++++|++|||.||+++ +|+.+. +.++..++++.+...++..+.++++++.+|++++++.-+ ..+..+... .+.
T Consensus 27 ~~vvv~lSGGiDSsv~a~l~~~~~g~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~i~-~~~~~~~~~--~~~-- 101 (249)
T 3p52_A 27 QGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQ-SILDAFIKQ--SEN-- 101 (249)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECCCH-HHHHHHHTT--CSC--
T ss_pred CCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECc-HHHHHHHHh--ccc--
Confidence 6899999999999877 777775 888999999999777788999999999999998776432 222333221 111
Q ss_pred ccchhch--hhccccHHHHHHHccCC--EEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHHHHH
Q 018045 88 EDGHQEC--CRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIW 163 (361)
Q Consensus 88 ~~~~~~c--c~~~K~~pl~~~~~~~~--~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dv~ 163 (361)
..+...| |...+..-+..+.+... ++.||. ++|.. ..... .++ .+.--++||.+++..||+
T Consensus 102 ~~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tgn-~se~~---~g~~t-----~~g------d~~~~i~PL~~l~K~eV~ 166 (249)
T 3p52_A 102 TTLVSLGNFAARIRMSLLYDYSALKNSLVIGTSN-KSELL---LGYGT-----IYG------DLACAFNPIGSLYKSEIY 166 (249)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCC-HHHHH---HTCSC-----TTT------TTCCSEETTTTSCHHHHH
T ss_pred cCCccHhHHHHHHHHHHHHHHHHHCCCeEEeCCC-HHHHH---ccchh-----hhc------cccCccccccCCcHHHHH
Confidence 1122223 45555666666655443 333443 34431 11110 111 012248999999999999
Q ss_pred HHHHhCCCC
Q 018045 164 NFLRTMDVP 172 (361)
Q Consensus 164 ~yi~~~~lp 172 (361)
++.+..|+|
T Consensus 167 ~la~~~gip 175 (249)
T 3p52_A 167 ALAKYLNLH 175 (249)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCc
Confidence 999999987
No 189
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.13 E-value=1e-10 Score=88.26 Aligned_cols=79 Identities=11% Similarity=0.185 Sum_probs=64.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPS 345 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~ 345 (361)
...+.++.|+++||++|+.+.+.|++++ . ++.|..||++ .+ +++. ++|+ .++|++ |.+|+ ... .+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~----~-~i~~~~vdi~~~~~-~el~-~~~g-~~vP~l--~~~g~--~~~-~~ 80 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK----D-RFILQEVDITLPEN-STWY-ERYK-FDIPVF--HLNGQ--FLM-MH 80 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS----S-SSEEEEEETTSSTT-HHHH-HHSS-SSCSEE--EESSS--EEE-ES
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh----h-CCeEEEEECCCcch-HHHH-HHHC-CCCCEE--EECCE--EEE-ec
Confidence 4667899999999999999999998764 2 4899999999 77 8999 8999 999986 45776 333 33
Q ss_pred CCCCHHHHHHHHHHh
Q 018045 346 ERRDVDSLMAFVDAL 360 (361)
Q Consensus 346 ~~~~~~~l~~~i~~~ 360 (361)
..+.+.|.++|+++
T Consensus 81 -g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 81 -RVNTSKLEKQLRKL 94 (100)
T ss_dssp -SCCHHHHHHHHHSS
T ss_pred -CCCHHHHHHHHHHH
Confidence 37899999999864
No 190
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=99.12 E-value=1.6e-10 Score=103.36 Aligned_cols=144 Identities=12% Similarity=0.077 Sum_probs=95.6
Q ss_pred CcEEEEecchHHHHHH-HHHHHcC-CCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTG-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFY 87 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~-~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~~ 87 (361)
++++|++|||+||+++ +|+.+.. .++..++++++...++..++++++++.+|++++++..+. ....+...... .
T Consensus 26 ~~vvv~lSGGiDSsv~~~l~~~~~~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~i~~-~~~~~~~~~~~--~- 101 (268)
T 1xng_A 26 KKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAP-YDAIFSSHFKD--A- 101 (268)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHH-HHHHHHHHCTT--C-
T ss_pred CCEEEEccCcHHHHHHHHHHHHhCCCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEeChH-HHHHHHHHhhh--c-
Confidence 6899999999999877 7777764 678899999998789999999999999999988774332 12233322211 0
Q ss_pred ccchhch--hhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHHHHH
Q 018045 88 EDGHQEC--CRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIW 163 (361)
Q Consensus 88 ~~~~~~c--c~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dv~ 163 (361)
.+...| |...+...+.+..+ +..++.||. .+|.. .-.. ..++ .+...++||.+|+..||+
T Consensus 102 -~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg~-~~E~~-~Gy~-------t~~g------d~~~~i~PL~~l~K~ev~ 165 (268)
T 1xng_A 102 -SLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSN-KSERM-LGYG-------TLFG------DLACAINPIGELFKTEVY 165 (268)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHH-HTCS-------CTTT------TTCCSEETTTTSCHHHHH
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHCCCEEEECCc-HHHHh-cCcc-------cccC------CCCeeEEecCCCCHHHHH
Confidence 112223 23344455555544 455666665 35542 1111 0111 122358999999999999
Q ss_pred HHHHhCCCCC
Q 018045 164 NFLRTMDVPI 173 (361)
Q Consensus 164 ~yi~~~~lp~ 173 (361)
+|++..|+|.
T Consensus 166 ~la~~~gip~ 175 (268)
T 1xng_A 166 ELARRLNIPK 175 (268)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHHcCCcH
Confidence 9999999983
No 191
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.11 E-value=2.4e-10 Score=112.00 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=80.6
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 251 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
...++++.++.+.+ ...+..++.||++||++|+.+.|.+++++..+. ++.+.+||.+.+ ++++ ++|+|.++||+
T Consensus 101 ~~~~~~~~~~~i~~--~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~-~~~~-~~~~i~svPt~ 174 (521)
T 1hyu_A 101 PSKEAQSLLEQIRD--IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF-QNEI-TERNVMGVPAV 174 (521)
T ss_dssp CCCSCHHHHHHHHH--CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred CCCCCHHHHHHHHh--cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh-HHHH-HHhCCCccCEE
Confidence 34577777777654 235677999999999999999999999999875 599999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
++ +|+ .+.. | ..+.++|.++|++
T Consensus 175 ~i--~g~--~~~~-G-~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 175 FV--NGK--EFGQ-G-RMTLTEIVAKVDT 197 (521)
T ss_dssp EE--TTE--EEEE-S-CCCHHHHHHHHCC
T ss_pred EE--CCE--EEec-C-CCCHHHHHHHHhh
Confidence 77 776 3433 4 6899999999864
No 192
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.10 E-value=4.3e-10 Score=93.15 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=71.2
Q ss_pred CCCcEEEEEECCCChh-HHhhHHHHHHHHHHhcC----CCeEEEEEEcCCC--c-------------------------h
Q 018045 268 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGD--Q-------------------------K 315 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~--~-------------------------~ 315 (361)
.++++||+||++||++ |+.+.|.++++.+.++. .++.|+.|++|.. . .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999962 3799999998742 0 1
Q ss_pred HHHHHcCCCCCCC---------------eEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 316 EYAKQKLQLGSFP---------------TILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 316 ~l~~~~~~v~~~P---------------t~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++ +.|+|..+| +++++ ++|+ ....+.| ..+.++|.+.|+++
T Consensus 105 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QAS-HSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGL-FTDYYGR-SRSAEQISDSVRRH 162 (171)
T ss_dssp HHH-HHSCCCCEECCCCSSCCCCEECCCEEEEECTTSC-EEEEEES-SCCHHHHHHHHHHH
T ss_pred HHH-HHhCeEEEecCCCCCCCeEEeccceEEEECCCCe-EEEEECC-CCCHHHHHHHHHHH
Confidence 577 789999888 77777 4555 2344444 68899999988865
No 193
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.09 E-value=3.6e-10 Score=92.86 Aligned_cols=90 Identities=9% Similarity=0.101 Sum_probs=71.3
Q ss_pred CCCcEEEEEECCCChh-HHhhHHHHHHHHHHhcC----CCeEEEEEEcCCCc---------------------------h
Q 018045 268 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGDQ---------------------------K 315 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~vd~~~~~---------------------------~ 315 (361)
.++++||+||++||++ |+.+.|.++++.+.+++ .++.++.|++|... .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999964 37999999987520 1
Q ss_pred HHHHHcCCCCCCC---------------eEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 316 EYAKQKLQLGSFP---------------TILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 316 ~l~~~~~~v~~~P---------------t~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.++ +.|+|..+| +++++. +|+ ....+.| ..+.++|.+.|+++
T Consensus 102 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVA-RAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGE-FLDYFGQ-NKRKGEIAASIATH 159 (164)
T ss_dssp HHH-HTTTCCEEEEEECTTSCEEEEECCEEEEECTTSC-EEEEEET-TCCHHHHHHHHHHH
T ss_pred HHH-HhcCeEEEecCCCCCCCeeEeccceEEEECCCCe-EEEEeCC-CCCHHHHHHHHHHH
Confidence 377 889999999 677774 555 2344444 68899999888765
No 194
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.09 E-value=3.7e-10 Score=95.63 Aligned_cols=91 Identities=15% Similarity=0.218 Sum_probs=68.7
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cch---HHH-H-----------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQK---EYA-K----------------- 319 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~~---~l~-~----------------- 319 (361)
.++++||+||++||++|+.+.|.++++.+++++.++.++.|+++. ... .++ .
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 578999999999999999999999999999987569999999873 101 111 0
Q ss_pred -----------HcCCCCCCC------eEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 320 -----------QKLQLGSFP------TILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 -----------~~~~v~~~P------t~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
..|++.++| +++++ ++|+ ....+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 183 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGV-PVERFSP-GASVKDIEKKLIPL 183 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSC-EEEEECT-TCCHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCc-EEEEECC-CCCHHHHHHHHHHH
Confidence 124778889 77777 5555 2444555 67899999988865
No 195
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.09 E-value=5.4e-11 Score=116.21 Aligned_cols=166 Identities=15% Similarity=0.218 Sum_probs=99.0
Q ss_pred CcEEEEecchHHHHHH-HHHHHc-CCCceEEEccCCCCcH-HHHHHHHHHHHHhCCcEEEEcCChHHHHHHHH-hcCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNP-ETYRFFDEVEKHFGIRIEYMFPDAVEVQALVR-SKGLFS 85 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~-~~~i~v~~~dtg~~~p-et~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~-~~~~~~ 85 (361)
++++|++|||+||+++ +|+.+. +.++.++|+|+|...+ |..+.++.+++++|++++++..... +.. ..+..
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~~G~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~----~~~~l~g~~- 305 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVDAKDR----FMKALKGIS- 305 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHHHGGGEEEEEECCSCSCTTHHHHHHHHHTTSSCCEEEEECCHHH----HHSSSSSCC-
T ss_pred CeEEEEEecCcCHHHHHHHHHHHhCCeEEEEEeccCCCChhHHHHHHHHHHHHcCCcEEEEeChHH----HHHhhcCCC-
Confidence 6899999999999877 788775 8889999999997654 4545555699999999988854321 111 11111
Q ss_pred CCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCC----ceecCCCCcCCcCCCCCeEEEeeCccCcH
Q 018045 86 FYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKWNPVANVKG 159 (361)
Q Consensus 86 ~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~----~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~ 159 (361)
.+......|+. .....+.+..+ +.+.+++|+..+|-...+.... .+.......+.. ...+...++||.++++
T Consensus 306 ~~~~~r~~~~~-~~~~~~~~~A~~~g~~~la~Gh~~dD~~Et~~~~~g~~~~ik~~~~l~gl~-~~~~~~iirPL~~l~K 383 (527)
T 3tqi_A 306 DPEEKRKIAGE-QFIRVFEEQAKKLNVKWLGQGTIYPDVIESAKTKTGKGHIIKTHHNVGGLP-LNMELKLIEPLRELFK 383 (527)
T ss_dssp CHHHHHHHHHH-HHHHHHHHTTTTTTCCEEECCCCHHHHHCC---------------------------CEECTTTTCCH
T ss_pred ChhhhhhhhHH-HHHHHHHHHHHHcCCCEEEccccCCccccccccCCChhheeeeecccccCc-ccccCccccchhcCCH
Confidence 11111222332 23444555444 5678999997776421110000 000000000000 0012336899999999
Q ss_pred HHHHHHHHhCCCCCCccccCCCC
Q 018045 160 NDIWNFLRTMDVPINSLHSQGYI 182 (361)
Q Consensus 160 ~dv~~yi~~~~lp~~~lY~~g~~ 182 (361)
+||.+|.+++|+|+.-.+.+-|+
T Consensus 384 ~EIr~~a~~lGlp~~~v~~~P~p 406 (527)
T 3tqi_A 384 DEVRKLGLELGLPADLIYRHPFP 406 (527)
T ss_dssp HHHHHHHHHHTCCHHHHTCCCCC
T ss_pred HHHHHHHHHcCCChhhhccCCCC
Confidence 99999999999998666665444
No 196
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.08 E-value=6.8e-10 Score=93.75 Aligned_cols=91 Identities=16% Similarity=0.233 Sum_probs=67.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------CchHHHH--H-c----------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQKEYAK--Q-K---------------- 321 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~~~l~~--~-~---------------- 321 (361)
.++++||+||++||++|+.+.|.+.++.+++++.++.++.|+++. ....+.. + +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 579999999999999999999999999999987679999998862 1122220 1 1
Q ss_pred ----------------CCCCCCC---eEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 322 ----------------LQLGSFP---TILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 322 ----------------~~v~~~P---t~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+++..+| ++++++ +|+ ....+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~-i~~~~~g-~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGV-PVERFSP-GASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSC-EEEEECT-TCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCC-EEEEECC-CCCHHHHHHHHHHH
Confidence 1334667 888884 555 3445555 68899999999876
No 197
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=99.08 E-value=3.1e-10 Score=100.07 Aligned_cols=146 Identities=16% Similarity=0.093 Sum_probs=94.3
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCC-
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFY- 87 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~~- 87 (361)
++++|++|||.||+++ +|+.+...+...++++++...++..++++++++++|++++++.-.. .+..+...-.. .+.
T Consensus 30 ~~vvv~lSGGiDSsv~a~l~~~~~~~~~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~~~~-~~~~~~~~~~~-~~~~ 107 (249)
T 3fiu_A 30 EGFVIGLSGGIDSAVAASLAVKTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTISIQP-AYEAFLASTQS-FTNL 107 (249)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTSCEEEEECCCTTSCHHHHHHHHHHHHHHTCEEEECCCHH-HHHHHHHHTGG-GC--
T ss_pred CCEEEEecCcHHHHHHHHHHHHhCCCCEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEEChH-HHHHHHHHHHh-hccC
Confidence 6899999999999877 8888876665589999987778899999999999999988764332 23333221100 000
Q ss_pred ccchhchh-----hccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHH
Q 018045 88 EDGHQECC-----RVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGN 160 (361)
Q Consensus 88 ~~~~~~cc-----~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~ 160 (361)
...++.|| ...+..-+..+.+ +..++.|| .++|. +........+ +.--++||.+++..
T Consensus 108 ~~~~~~~~~~Ni~~r~R~~~l~~~A~~~g~~vl~TG-n~sE~---~~G~~t~~gd-----------~~~~i~PL~~l~K~ 172 (249)
T 3fiu_A 108 QNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTD-NACEW---YMGYFTKFGD-----------GAADILPLVNLKKS 172 (249)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCC-CHHHH---HHTCSCTTTT-----------TCCSBCTTTTCCHH
T ss_pred CCCcChhHHHHHHHHHHHHHHHHHHHHcCCEEEECC-CHHHH---hcCchhccCC-----------CCcceeecccCcHH
Confidence 01223344 3444445555544 44466677 45554 2222111111 12258999999999
Q ss_pred HHHHHHHhCCCC
Q 018045 161 DIWNFLRTMDVP 172 (361)
Q Consensus 161 dv~~yi~~~~lp 172 (361)
||+++.+..|||
T Consensus 173 eVr~lA~~lglp 184 (249)
T 3fiu_A 173 QVFELGKYLDVP 184 (249)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCc
Confidence 999999999986
No 198
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=2.1e-11 Score=88.08 Aligned_cols=61 Identities=18% Similarity=0.285 Sum_probs=48.6
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-CCchHHHHHcCCCCCCCeEEEEeCCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-~~~~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
-++.||++||++|+.+.|.++++++.++. .+.++.||.+ .. .+++ ++|++.++||+++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~-~~~~-~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKAR-IAEA-EKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSST-HHHH-HHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhh-HHHH-HHcCCCcCCEEEE--CCE
Confidence 37889999999999999999998876643 3555555554 35 7888 8999999999987 665
No 199
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.7e-10 Score=94.64 Aligned_cols=90 Identities=19% Similarity=0.239 Sum_probs=66.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC--------Cc--hHHH-H-----------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--------DQ--KEYA-K----------------- 319 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--------~~--~~l~-~----------------- 319 (361)
.++++||+|||+||++|+ ..|.+.++.+++++.++.++.|+++. .+ ..+. +
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 578999999999999999 99999999999987569999998741 00 1111 0
Q ss_pred -----------HcCCCCCCC------eEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 320 -----------QKLQLGSFP------TILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 -----------~~~~v~~~P------t~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+.|++.++| +++++ ++|+ ....+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGK-VYERYSS-LTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSC-EEEEECT-TSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCC-EEEEeCC-CCCHHHHHHHHHHH
Confidence 247888999 77777 5555 2444555 67888888888765
No 200
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.06 E-value=2.9e-10 Score=94.02 Aligned_cols=90 Identities=13% Similarity=0.206 Sum_probs=68.3
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---hHHHHH-cC--------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQ-KL-------------- 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~-~~-------------- 322 (361)
.++++||+||++||++|+.+.|.++++++++++.++.++.|+++. .. ..++ + ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFV-CTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHH-HHhcCCCceeEeeeccCC
Confidence 578999999999999999999999999999987569999999863 10 2233 2 32
Q ss_pred ---------------CC--CCCC---eEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 ---------------QL--GSFP---TILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ---------------~v--~~~P---t~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++ .++| +++++ ++|+ ....+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQ-VVDRYYP-TTSPLSLERDIKQL 166 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSC-EEEEECT-TSCGGGGHHHHHHH
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCC-EEEeeCC-CCCHHHHHHHHHHH
Confidence 34 6678 77777 4555 2444555 67888899988876
No 201
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=99.05 E-value=2.8e-10 Score=101.22 Aligned_cols=144 Identities=17% Similarity=0.167 Sum_probs=93.5
Q ss_pred CcEEEEecchHHHHHH-HHHHHc-C-CCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 86 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~-~-~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~ 86 (361)
++++|++|||+||+++ +|+.+. + .++.++++++|.. +..++++++++.+|++++++..+. .+..+.......
T Consensus 23 ~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~--~~~~~a~~~a~~lgi~~~~i~i~~-~~~~~~~~l~~~-- 97 (257)
T 2e18_A 23 NGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFEN--KDVEDAKLVAEKLGIGYKVINIKP-IVDSFVENLELN-- 97 (257)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCS--THHHHHHHHHHHHTCEEEECCCHH-HHHHHHHHHCSC--
T ss_pred CcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCc--hHHHHHHHHHHHhCCCEEEEEChH-HHHHHHHHhccc--
Confidence 6899999999999877 777775 3 5788999999964 788999999999999988764432 122232222110
Q ss_pred Cccchhch--hhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHHHH
Q 018045 87 YEDGHQEC--CRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDI 162 (361)
Q Consensus 87 ~~~~~~~c--c~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dv 162 (361)
..+...| |...+...+.+..+ +..++.||...++.. -... .++ .+...++||.+|+..||
T Consensus 98 -~~~~~~~n~~ar~r~~~l~~~A~~~g~~vl~tg~~~e~~~--Gy~t-------~~g------~~~~~i~Pl~~l~K~ev 161 (257)
T 2e18_A 98 -LDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSNRSEFLT--GYFT-------KWG------DGASDYAPIINLYKTEV 161 (257)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCHHHHHH--TCSC-------TTS------TTCSSBCTTTTSCHHHH
T ss_pred -cccchhHHHHHHHHHHHHHHHHHHcCCEEEEcCchhHHhc--CCee-------ccC------CCccCEeecCCCcHHHH
Confidence 0111222 22344444555444 556777887654321 1110 110 12235899999999999
Q ss_pred HHHHHhCCCCCC
Q 018045 163 WNFLRTMDVPIN 174 (361)
Q Consensus 163 ~~yi~~~~lp~~ 174 (361)
++|.+.+|+|+.
T Consensus 162 ~~la~~~gip~~ 173 (257)
T 2e18_A 162 WEIAKRIGVPER 173 (257)
T ss_dssp HHHHHHHTCCHH
T ss_pred HHHHHHcCCCHH
Confidence 999999999853
No 202
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.03 E-value=4.7e-10 Score=95.36 Aligned_cols=92 Identities=14% Similarity=0.254 Sum_probs=72.7
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------chHHHHHcC
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------~~~l~~~~~ 322 (361)
.++++||+|| ++||++|+.+.|.+.++.+.+++.++.|+.|+++.. +..++ +.|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELS-QAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHH-HHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHH-HHh
Confidence 4789999999 999999999999999999999865799999998741 14677 789
Q ss_pred CCC-----CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 018045 323 QLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~-----~~Pt~~~~~~g~~~~~~~~~~---~~~~~~l~~~i~~~ 360 (361)
++. ++|++++++..+.....+.|. ..+.++|.+.|+++
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 999 999999996433323333331 23789999998875
No 203
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.03 E-value=9.8e-10 Score=90.70 Aligned_cols=91 Identities=15% Similarity=0.216 Sum_probs=66.2
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---hHH-HHHcC--------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEY-AKQKL-------------- 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l-~~~~~-------------- 322 (361)
.++++||+||++||++|+...|.++++.+.+++.++.++.|+++. .. ..+ . +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVT-EKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH-HHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHH-HhcCCCCceEEEEeecC
Confidence 578999999999999999999999999999987569999999863 10 112 1 111
Q ss_pred ---------------C-----CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 ---------------Q-----LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ---------------~-----v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+ |..+|+++++...+.....+.| ..+.++|.+.|+++
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSP-TTAPYDIEGDIMEL 165 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCC-CCCHHHHHHHHHHH
Confidence 3 4456888888544333444555 67788888888765
No 204
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.02 E-value=2.3e-10 Score=96.16 Aligned_cols=90 Identities=18% Similarity=0.188 Sum_probs=67.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---hHHHHHc-C--------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQK-L-------------- 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~~-~-------------- 322 (361)
.++++||+||++||++|+.+.|.++++++++++.++.++.|+++. .. ..++ ++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFA-RRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHH-HhhcCCCceeEeecccCC
Confidence 578999999999999999999999999999987569999999863 10 1233 22 1
Q ss_pred ---------CCCCCC-------eEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 ---------QLGSFP-------TILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ---------~v~~~P-------t~~~~-~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.+.++| +++++ ++|+ ....+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 179 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGK-VVGAWDP-TVSVEEVRPQITAL 179 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSC-EEEEECT-TSCHHHHHHHHHTT
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCC-EEEEeCC-CCCHHHHHHHHHHH
Confidence 134578 66666 5555 2444555 68899999999876
No 205
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.02 E-value=3.1e-10 Score=96.75 Aligned_cols=92 Identities=13% Similarity=0.239 Sum_probs=72.4
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.+++++|+|| ++||++|+.+.|.+.++++++++.++.++.|++|.. +..++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS- 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH-
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH-
Confidence 4789999999 999999999999999999999765799999998741 15788
Q ss_pred HcCCCC-----CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 018045 320 QKLQLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~-----~~Pt~~~~~~g~~~~~~~~~~---~~~~~~l~~~i~~~ 360 (361)
+.|++. ++|++++++..+.....+.|. ..+.++|.+.|+++
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 899999 999999996444323333331 13688999988875
No 206
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.02 E-value=6.5e-10 Score=93.44 Aligned_cols=90 Identities=16% Similarity=0.128 Sum_probs=67.1
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---hHHHHHcC---------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQKL--------------- 322 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~~~--------------- 322 (361)
.++++||+||++||++|+.+.|.++++.+++++.++.|+.|+++. .. ..++ +++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHH-HHcCCCceEEeeeccCCc
Confidence 578999999999999999999999999999987569999998862 10 1122 221
Q ss_pred ----------------C-----CCCCCeEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 323 ----------------Q-----LGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ----------------~-----v~~~Pt~~~~~-~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+ |..+|+++++. +|+ ....+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGC-VVKRYGP-MEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSC-EEEEECT-TSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCC-EEEEeCC-CCCHHHHHHHHHHh
Confidence 2 34469988885 555 3444555 67888999888775
No 207
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.02 E-value=7.3e-10 Score=90.78 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=70.6
Q ss_pred CCC-cEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------CchHHHHHcC
Q 018045 268 RQE-PWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----------------------DQKEYAKQKL 322 (361)
Q Consensus 268 ~~~-~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-----------------------~~~~l~~~~~ 322 (361)
.++ +++|+|| ++||++|+.+.|.+.++++.+++.++.++.|++|. + ..++ +.|
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~-~~~ 111 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPH-GAVS-QAY 111 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTT-THHH-HHT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcC-hHHH-HHc
Confidence 355 8999998 99999999999999999999976579999999874 4 6788 899
Q ss_pred CCC----CCC--eEEEE-eCCCCCeeecCCC---CCCHHHHHHHHHHhC
Q 018045 323 QLG----SFP--TILFF-PKHSSKPIKYPSE---RRDVDSLMAFVDALR 361 (361)
Q Consensus 323 ~v~----~~P--t~~~~-~~g~~~~~~~~~~---~~~~~~l~~~i~~~~ 361 (361)
++. ++| +++++ ++|+. ...+.|. ..+.+++.+.|++++
T Consensus 112 ~v~~~~~~~p~~~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 112 GVFNEQAGIANRGTFVVDRSGII-RFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp TCEETTTTEECSEEEEECTTSBE-EEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred CCccccCCCeeeeEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHhc
Confidence 998 999 77777 45552 3334342 236788888887764
No 208
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.02 E-value=4e-10 Score=95.05 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=72.2
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------chHHHHHcC
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------------------~~~l~~~~~ 322 (361)
.++++||+|| ++||++|+.+.|.+.++++++++.++.++.|+++.. +..++ +.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTIS-RQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHH-HHh
Confidence 4689999999 999999999999999999999865699999998751 15678 889
Q ss_pred CCC------CCCeEEEEe-CCCCCeeecCCC---CCCHHHHHHHHHHh
Q 018045 323 QLG------SFPTILFFP-KHSSKPIKYPSE---RRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~------~~Pt~~~~~-~g~~~~~~~~~~---~~~~~~l~~~i~~~ 360 (361)
++. ++|++++++ +|+. ...+.|. ..+.++|.+.|+++
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i-~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVI-QAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBE-EEEEEECTTSCCCTTHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeE-EEEEecCCCCCCCHHHHHHHHHHH
Confidence 998 999999995 5552 3333331 13788888888765
No 209
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.01 E-value=9e-10 Score=80.13 Aligned_cols=74 Identities=16% Similarity=0.301 Sum_probs=59.0
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHcCC--CCCCCeEEEEeCCCCCeeecCCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQ--LGSFPTILFFPKHSSKPIKYPSER 347 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~--v~~~Pt~~~~~~g~~~~~~~~~~~ 347 (361)
++.|+++||++|+.+.+.++++++.+++ +.+..+|++.+. .++. ++++ +.++|++ |.+|+ .+ ++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~-~~~~~~~~~vP~i--~~~g~--~i---~~- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQ-QKAGKPVETVPQI--FVDQQ--HI---GG- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHH-HHTCCCSCCSCEE--EETTE--EE---ES-
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHH-HHhCCCCceeCeE--EECCE--EE---EC-
Confidence 7889999999999999999999988764 999999997651 3788 8898 9999998 34665 33 22
Q ss_pred CCHHHHHHHHHH
Q 018045 348 RDVDSLMAFVDA 359 (361)
Q Consensus 348 ~~~~~l~~~i~~ 359 (361)
.++|.+++++
T Consensus 72 --~~~l~~~~~~ 81 (85)
T 1ego_A 72 --YTDFAAWVKE 81 (85)
T ss_dssp --SHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 2678888765
No 210
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.00 E-value=3.2e-10 Score=93.94 Aligned_cols=90 Identities=19% Similarity=0.212 Sum_probs=70.4
Q ss_pred CCCcEEEEEECCCChh-HHhhHHHHHHHHHHhcCC---CeEEEEEEcCCC--c-------------------------hH
Q 018045 268 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAGN---GVKVGKFRADGD--Q-------------------------KE 316 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~-C~~~~p~~~~la~~~~~~---~v~~~~vd~~~~--~-------------------------~~ 316 (361)
.++++||+||++||++ |+.+.|.+.++.+.+++. ++.|+.|+++.+ . ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999997 999999999999998742 699999998743 1 13
Q ss_pred HHHHcCC---------------CCCCCeEEEEeCCCCCeeecCCCCC--CHHHHHHHHHHh
Q 018045 317 YAKQKLQ---------------LGSFPTILFFPKHSSKPIKYPSERR--DVDSLMAFVDAL 360 (361)
Q Consensus 317 l~~~~~~---------------v~~~Pt~~~~~~g~~~~~~~~~~~~--~~~~l~~~i~~~ 360 (361)
++ +.|+ |.++|+++++++|+ ....+.| .. +.++|.+.|+++
T Consensus 114 ~~-~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~-i~~~~~g-~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AA-QTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGR-LVLLYSP-DKAEATDRVVADLQAL 171 (172)
T ss_dssp HH-HHHTCCEEEEEEEETTEEEEEECCCEEEEETTE-EEEEECH-HHHTCHHHHHHHHHHC
T ss_pred HH-HhcCeEEEeccCCCCCCceEecCCEEEEEECCE-EEEEECC-CCCCCHHHHHHHHHHh
Confidence 44 4554 46889999999444 3444554 56 899999999886
No 211
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=99.00 E-value=7.5e-10 Score=104.93 Aligned_cols=145 Identities=10% Similarity=0.116 Sum_probs=95.6
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCC-CCcHHHHHHHHHHHHHh-----CCcEEEEcCChHHHHHHHHhcC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTG-RLNPETYRFFDEVEKHF-----GIRIEYMFPDAVEVQALVRSKG 82 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg-~~~pet~~~v~~~~~~~-----g~~i~~~~p~~~~~~~~~~~~~ 82 (361)
++++|++|||+||+++ +++.+.+.++.++|+|++ +..++..+.+.++++.+ |++++++..... .......
T Consensus 188 ~kvlvalSGGvDS~vll~ll~~~G~~v~av~v~~~~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~~~~~-~~~i~~~-- 264 (413)
T 2c5s_A 188 GKVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEV-QKTINKE-- 264 (413)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHBTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHH-HHHHHHH--
T ss_pred CeEEEEeCCCChHHHHHHHHHHcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEECcHH-HHHHHhc--
Confidence 5799999999999877 888888888889999986 44467778888888888 899888754322 1122111
Q ss_pred CCCCCccchhchhhcccc---HHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccC
Q 018045 83 LFSFYEDGHQECCRVRKV---RPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANV 157 (361)
Q Consensus 83 ~~~~~~~~~~~cc~~~K~---~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W 157 (361)
. + ...-|..+|. ..+.+..+ +.+++++|+..+|-. ............. .+...++||+.+
T Consensus 265 ~---~---~~~~c~~~Rr~~~~~~~~~A~~~g~~~I~tG~~~dD~a-e~~l~~l~~~~~~--------~~~~virPL~~l 329 (413)
T 2c5s_A 265 I---P---SSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVA-SQTLDSMHTINEV--------TNYPVIRPLITM 329 (413)
T ss_dssp S---C---GGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTT-SCCHHHHHHHGGG--------CCSCEECTTTTC
T ss_pred C---C---cccHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhH-HHHHHHHhccccc--------CCCEEEeccCCC
Confidence 1 1 1112333332 33334443 567899999998853 2111111111100 123468999999
Q ss_pred cHHHHHHHHHhCCCC
Q 018045 158 KGNDIWNFLRTMDVP 172 (361)
Q Consensus 158 ~~~dv~~yi~~~~lp 172 (361)
+.+||.+|.++.|++
T Consensus 330 ~K~eI~~~a~~~Gl~ 344 (413)
T 2c5s_A 330 DKLEIIKIAEEIGTY 344 (413)
T ss_dssp CHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHcCCC
Confidence 999999999999984
No 212
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.98 E-value=2e-10 Score=88.90 Aligned_cols=81 Identities=15% Similarity=0.279 Sum_probs=54.7
Q ss_pred CCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----hHHHHHcCCCCCCCeEEEEeCCCCCeeecC
Q 018045 269 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILFFPKHSSKPIKYP 344 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~ 344 (361)
++.+++ ||++||++|+.+.|.|+++.. .+.++.||.+.+. ..++ ++|++.++||+ |.+|+. ...+.
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~~~~~~~l~-~~~~v~~~Pt~--~~~g~~-v~~~~ 88 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDGSQLQSALA-HWTGRGTVPNV--FIGGKQ-IGGCD 88 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE--EETTEE-EECHH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCCCChHHHHHHHH-HHhCCCCcCEE--EECCEE-ECChH
Confidence 456666 999999999999999988742 3455555554431 3588 89999999999 456762 22222
Q ss_pred CCCC---CHHHHHHHHHHh
Q 018045 345 SERR---DVDSLMAFVDAL 360 (361)
Q Consensus 345 ~~~~---~~~~l~~~i~~~ 360 (361)
+ .. +.+.|.++|+++
T Consensus 89 ~-~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 89 T-VVEKHQRNELLPLLQDA 106 (116)
T ss_dssp H-HHHHHHTTCHHHHHHHT
T ss_pred H-HHHHHhCChHHHHHHHc
Confidence 2 22 455777777753
No 213
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.98 E-value=2e-09 Score=92.53 Aligned_cols=44 Identities=20% Similarity=0.117 Sum_probs=40.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 311 (361)
.++++||+|||+||++|+...|.|+++++++++.++.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 57899999999999999999999999999998756999999986
No 214
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.94 E-value=2e-09 Score=91.56 Aligned_cols=92 Identities=11% Similarity=0.178 Sum_probs=71.8
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.++++||+|| ++||++|..+.|.+.++++++++.++.|+.|+++.. +..++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS- 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999765799999998742 14678
Q ss_pred HcCCCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 018045 320 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~~~~~~~~---~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|+++++...+.....+.|. ..+.+++.+.|+++
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 889998 799999995444322222221 35788999988865
No 215
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.91 E-value=3.7e-09 Score=88.50 Aligned_cols=45 Identities=22% Similarity=0.172 Sum_probs=41.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 312 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~ 312 (361)
.++++||+||++||++|+...|.++++.+.+++.++.++.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 578999999999999999999999999999987679999998764
No 216
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.91 E-value=3.5e-09 Score=89.12 Aligned_cols=91 Identities=15% Similarity=0.103 Sum_probs=66.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---hHHHHHcCC--------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQKLQ-------------- 323 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-------~~---~~l~~~~~~-------------- 323 (361)
.++++||+||++||++|+...|.++++.+++++.++.++.|+++. .. .+++ ++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHH-HHcCCCCeeeeeeccCCh
Confidence 578999999999999999999999999999987569999998863 10 2232 2222
Q ss_pred ----------------------CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 324 ----------------------LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 ----------------------v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+..+|+++++...+.....+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECT-TSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCC-CCCHHHHHHHHHHh
Confidence 2235888888543333444555 67888898888876
No 217
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.90 E-value=1.4e-09 Score=106.23 Aligned_cols=165 Identities=13% Similarity=0.129 Sum_probs=98.1
Q ss_pred CcEEEEecchHHHHHH-HHHHHc-CCCceEEEccCCCCcHHHHHHHHH-HHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDE-VEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 86 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~-~~~i~v~~~dtg~~~pet~~~v~~-~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~ 86 (361)
+++++++|||+||+++ +|+.+. +.++.++|+|+|.......+.+.+ +++.+|++++++..... +... ..+.. -
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a~G~~v~av~v~~g~~~~~e~~~~~~~la~~lgi~~~~v~~~~~-f~~~--l~~~~-~ 303 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDR-FLSA--LAGEN-D 303 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECHHH-HHHH--HTTCC-C
T ss_pred cceEEEecCCCCHHHHHHHHHHHhCCCEEEEEEeCCCCCchHHHHHHHHHHHHhCCcEEEEeccHH-HHHh--hcCCC-C
Confidence 6899999999999877 777775 788999999999765445555644 78899999988855432 1111 12221 1
Q ss_pred CccchhchhhccccHHHHHHHc---cCCEEEEeeeccCCccC-c----cCCCceecCCCCcCCcCCCCCeEEEeeCccCc
Q 018045 87 YEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPGT-R----SEIPVVQVDPVFEGLEGGVGSLVKWNPVANVK 158 (361)
Q Consensus 87 ~~~~~~~cc~~~K~~pl~~~~~---~~~~~i~G~R~~Es~~~-R----~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~ 158 (361)
+......|+ ......+.+..+ +.+.+++|+..+|-... + ..-.+..... ..+.. .......+.||.+++
T Consensus 304 pe~~~~~~~-~~~~~~l~~~A~~~~g~~~l~~Gt~~~D~~E~~~~~~~~s~~iks~~~-l~gl~-~~~~~~~i~PL~~l~ 380 (525)
T 1gpm_A 304 PEAKRKIIG-RVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN-VGGLP-KEMKMGLVEPLKELF 380 (525)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHSSSEEEEECCCCHHHHHHTTC------------------------CCEEECTTTTCC
T ss_pred hHHhhhhhh-HHHHHHHHHHHHhcCCCCEEEeCCCCcchhhhcCcccccccccccccc-ccccc-cccCCcEEehhhcCC
Confidence 111112233 233455666555 44688999965432101 1 0000000000 00000 001234689999999
Q ss_pred HHHHHHHHHhCCCCCCccccCCC
Q 018045 159 GNDIWNFLRTMDVPINSLHSQGY 181 (361)
Q Consensus 159 ~~dv~~yi~~~~lp~~~lY~~g~ 181 (361)
.+||++|.++.|+|+.-++++-|
T Consensus 381 K~EVr~la~~lglp~~i~~~~P~ 403 (525)
T 1gpm_A 381 KDEVRKIGLELGLPYDMLYRHPF 403 (525)
T ss_dssp HHHHHHHHHHTTCCHHHHTSCCC
T ss_pred HHHHHHHHHHcCCCHHhcccCCC
Confidence 99999999999999766666544
No 218
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.90 E-value=2.3e-08 Score=87.06 Aligned_cols=106 Identities=11% Similarity=0.132 Sum_probs=86.8
Q ss_pred CCceecCcccHHHHHhhcCCCC-cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC--CchHHHHHcCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLG 325 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~-~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~--~~~~l~~~~~~v~ 325 (361)
+.|.++|.+|+.++.. .+. .+++.|+.+||+.|..+.+.|+++|+.+++ .+.|+.+|++. + ..++ +.|++.
T Consensus 113 plv~e~t~~n~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~-~i~F~~vd~~~~~~-~~~l-~~fgl~ 186 (227)
T 4f9z_D 113 HMVTEYNPVTVIGLFN---SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQG-KILFILVDSGMKEN-GKVI-SFFKLK 186 (227)
T ss_dssp CSEEECCHHHHHHHHH---SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTT-TCEEEEEETTSGGG-HHHH-HHTTCC
T ss_pred CceeecCcccHHHHhc---cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhC-CEEEEEeCCccHhH-HHHH-HHcCCC
Confidence 4589999999998876 544 455667789999999999999999999998 79999999974 5 6788 899998
Q ss_pred --CCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 326 --SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 --~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.+|+++++.........+..+..+.+.|.+|++++
T Consensus 187 ~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 187 ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 89999999855433344443478999999999875
No 219
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=98.89 E-value=1.2e-09 Score=103.27 Aligned_cols=160 Identities=16% Similarity=0.202 Sum_probs=98.7
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHHH---HHHhcCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQA---LVRSKGLF 84 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~-~i~~~~p~~~~~~~---~~~~~~~~ 84 (361)
++|+|+||||.||+++ +++.+.+.++.++++|.|..-.+-.++++++++++|+ ++.++.-......+ .+.....
T Consensus 11 ~KVvVA~SGGlDSSvll~~L~e~G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~eef~~~v~p~i~~na~- 89 (455)
T 1k92_A 11 QRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAF- 89 (455)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHTCC-
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeChHHHHHHhHHHHHcCCc-
Confidence 6899999999999877 8888888889999999996433457899999999999 78777543221111 1111111
Q ss_pred CCCc-cchhchhhcccc--------HHHHHHHc--cCCEEEEeeec--cCCccCccCCCceecCCCCcCCcCCCCCeEEE
Q 018045 85 SFYE-DGHQECCRVRKV--------RPLRRALK--GLRAWITGQRK--DQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 151 (361)
Q Consensus 85 ~~~~-~~~~~cc~~~K~--------~pl~~~~~--~~~~~i~G~R~--~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (361)
+. ... -|+.++. .-+.++.+ +.+.+++|+.. ++. .|......... +++-.+
T Consensus 90 --y~~eg~--rcY~l~t~~aRp~i~~~l~e~A~e~Gad~IAtGht~kgnDq--~rf~~~~~al~----------p~l~vi 153 (455)
T 1k92_A 90 --HNTTGG--LTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDI--ERFYRYGLLTN----------AELQIY 153 (455)
T ss_dssp --CCEETT--EECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTSSHH--HHHHHHHHHHC----------TTCEEE
T ss_pred --ccccCc--eecccCCcchHHHHHHHHHHHHHHcCCCEEEECCcCCCCCH--HHHHHHHHhcC----------CCCEEE
Confidence 10 000 0111111 12233333 67899999963 221 23211111111 235568
Q ss_pred eeCcc-------CcHHHHHHHHHhCCCCCCccccCCCCCCCC
Q 018045 152 NPVAN-------VKGNDIWNFLRTMDVPINSLHSQGYISIGC 186 (361)
Q Consensus 152 ~Pi~~-------W~~~dv~~yi~~~~lp~~~lY~~g~~~~GC 186 (361)
.|+.+ ++.+||.+|.+++|||+..--++-|++--|
T Consensus 154 aPlr~~~ll~~~lsK~EI~~yA~~~GIp~~~t~~~pyS~d~n 195 (455)
T 1k92_A 154 KPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSN 195 (455)
T ss_dssp CGGGCHHHHHHSSSHHHHHHHHHHTTCCCCCCCCCSSEEEEE
T ss_pred CeeccccccccCCCHHHHHHHHHHcCCCcccCCCCCCccCCc
Confidence 99988 699999999999999996434444555333
No 220
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.88 E-value=4.1e-09 Score=90.01 Aligned_cols=92 Identities=13% Similarity=0.216 Sum_probs=71.8
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.++++||+|| ++||++|+.+.|.+.++++++++.++.|+.|++|.. +..++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM- 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH-
Confidence 4689999999 999999999999999999999765799999998741 14677
Q ss_pred HcCCCC------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.| ...+.++|.+.|+++
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 789998 99999999544432222222 135679999888875
No 221
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.88 E-value=2.9e-09 Score=90.18 Aligned_cols=92 Identities=16% Similarity=0.226 Sum_probs=71.1
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.++++||+|| ++||++|+.+.|.+.++++++++.++.++.|++|.. +..++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA- 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH-
Confidence 4689999999 999999999999999999999755799999988741 14677
Q ss_pred HcCCCC-----CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG-----SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~-----~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.+ ...+.+++.+.|+++
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 889999 89999999544332323323 124688888888765
No 222
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.88 E-value=4.6e-09 Score=91.03 Aligned_cols=92 Identities=11% Similarity=0.186 Sum_probs=71.7
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.++++||+|| ++||++|+.+.|.+.++++++++.++.|+.|+++.. +..++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~- 133 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQIS- 133 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999765799999988641 14678
Q ss_pred HcCCCC------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.+ ...+.+++.+.|+++
T Consensus 134 ~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 134 RDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 899998 99999999544332222222 135788999888865
No 223
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.85 E-value=6.4e-09 Score=89.68 Aligned_cols=92 Identities=14% Similarity=0.195 Sum_probs=71.3
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.++++||+|| ++||++|+.+.|.+.++++++++.++.|+.|++|.. +..++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS- 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH-
Confidence 4689999999 999999999999999999999755799999987641 14677
Q ss_pred HcCCCC-----CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG-----SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~-----~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.+ ...+.+++.+.|+++
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 889998 89999999644432222222 125688999888865
No 224
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.85 E-value=2.4e-08 Score=82.26 Aligned_cols=90 Identities=14% Similarity=0.184 Sum_probs=68.3
Q ss_pred CCCcEEEEEECCC-ChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------chHHHHHcCCC
Q 018045 268 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a~w-C~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~v 324 (361)
.+++++|.||++| |++|+...|.++++++++ . ++.++.|+.|.. +..+. +.|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG-EAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH-HHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH-HHhCC
Confidence 4789999999999 999999999999999999 4 699999988741 14577 78998
Q ss_pred CC------CCeEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 018045 325 GS------FPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~------~Pt~~~~~~g~~~~~~~~~----~~~~~~~l~~~i~~~ 360 (361)
.. .|++++++..+.....+.| ...+.+++.+.|+++
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 76 4999999544433333332 123568888888775
No 225
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.82 E-value=1e-08 Score=88.99 Aligned_cols=92 Identities=13% Similarity=0.231 Sum_probs=70.7
Q ss_pred CCCcEEEEEEC-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.++++||+||+ +||++|+...|.+.++.++|++.++.|+.|++|.. +..++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS- 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH-
Confidence 57899999996 99999999999999999999875799999998752 13567
Q ss_pred HcCCCC------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.+ .....+++.+.|+.+
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 789998 89999999644432333222 124578888888765
No 226
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.82 E-value=2.3e-08 Score=82.05 Aligned_cols=92 Identities=9% Similarity=0.081 Sum_probs=69.6
Q ss_pred CCCcEEEEEEC-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------chHHHHHcCCCCC
Q 018045 268 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGS 326 (361)
Q Consensus 268 ~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~v~~ 326 (361)
.+++++|+||+ +||++|....|.+.++.+++++.++.++.|.+|.. +..++ +.|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 112 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALC-RAFDVIK 112 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHH-HHTTCEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH-HHhCCcc
Confidence 46799999998 99999999999999999999876799999988732 13567 7888877
Q ss_pred ------------CCeEEEEeCCCCCeeecCCC--CCCHHHHHHHHHHh
Q 018045 327 ------------FPTILFFPKHSSKPIKYPSE--RRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ------------~Pt~~~~~~g~~~~~~~~~~--~~~~~~l~~~i~~~ 360 (361)
+|++++++..+.....+.+. ....+++.+.|+++
T Consensus 113 ~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 113 EKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 99999996544333333321 23457777777765
No 227
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=98.81 E-value=4.1e-09 Score=99.28 Aligned_cols=148 Identities=16% Similarity=0.213 Sum_probs=92.4
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCc-EEEEcCChHHHHH----HHHhcCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDAVEVQA----LVRSKGL 83 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~-i~~~~p~~~~~~~----~~~~~~~ 83 (361)
++++|++|||+||+++ +++.+.+.++.++++|.|.. +-.++++++++++|++ +.++........+ .+.....
T Consensus 6 ~kVvvalSGGlDSsvll~lL~e~G~eV~av~vd~g~~--~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~a~ 83 (413)
T 2nz2_A 6 GSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQK--EDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQSSAL 83 (413)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHTTEEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEECCcH--HHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHHhCcc
Confidence 5899999999999776 88888777888999999964 4578999999999997 7666443211111 1111111
Q ss_pred CCCCccchhchhhcccc-----HHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCc-
Q 018045 84 FSFYEDGHQECCRVRKV-----RPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVA- 155 (361)
Q Consensus 84 ~~~~~~~~~~cc~~~K~-----~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~- 155 (361)
+ ..+.-|....- .-+.++++ +.+++++|+........|..+-..... ++.-.+.|+.
T Consensus 84 ---~--e~~y~~g~~~aRp~i~~~l~~~A~~~Ga~~IatGh~~~~nDq~rf~lg~~~l~----------p~l~ii~Pl~d 148 (413)
T 2nz2_A 84 ---Y--EDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLA----------PQIKVIAPWRM 148 (413)
T ss_dssp ---B--TTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGC
T ss_pred ---c--ccccccccccchHHHHHHHHHHHHHcCCCEEEECCcCcccchHHHHHHHHhcC----------CCCceeccccc
Confidence 0 00111221111 12223333 678999999974221123211000011 2345689999
Q ss_pred -----cC-cHHHHHHHHHhCCCCCC
Q 018045 156 -----NV-KGNDIWNFLRTMDVPIN 174 (361)
Q Consensus 156 -----~W-~~~dv~~yi~~~~lp~~ 174 (361)
+| +.+||.+|.+++|||+.
T Consensus 149 ~~~ll~~~sK~EI~~yA~~~Gip~~ 173 (413)
T 2nz2_A 149 PEFYNRFKGRNDLMEYAKQHGIPIP 173 (413)
T ss_dssp HHHHTTCC-CHHHHHHHHHTTCCCC
T ss_pred hhhhccCCCHHHHHHHHHHcCCCee
Confidence 89 99999999999999985
No 228
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.77 E-value=2.4e-08 Score=82.69 Aligned_cols=92 Identities=17% Similarity=0.313 Sum_probs=66.5
Q ss_pred CCCcEEEEEECCCCh-hHHhhHHHHHHHHHHhcCC--CeEEEEEEcCCC--c-------------------------hHH
Q 018045 268 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAGN--GVKVGKFRADGD--Q-------------------------KEY 317 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~-~C~~~~p~~~~la~~~~~~--~v~~~~vd~~~~--~-------------------------~~l 317 (361)
.++++||+||++||+ +|+...|.+.++.+.++.. ++.|+.|+++.. + ..+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 578999999999999 9999999999999999763 399999998721 0 111
Q ss_pred HHHc----------------CCCCCCCeEEEEeCCCCCeeecCCCC-CCHHHHHHHHHHh
Q 018045 318 AKQK----------------LQLGSFPTILFFPKHSSKPIKYPSER-RDVDSLMAFVDAL 360 (361)
Q Consensus 318 ~~~~----------------~~v~~~Pt~~~~~~g~~~~~~~~~~~-~~~~~l~~~i~~~ 360 (361)
. +. +++..+|+++++...+.....+.|.. .+.++|.+.|+++
T Consensus 112 ~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 I-EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp H-HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHH
T ss_pred H-HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHH
Confidence 1 11 34667898888854443344444522 2589999999876
No 229
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.76 E-value=1.1e-07 Score=81.97 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=39.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 311 (361)
.+|++||+|||+||++|+ ..|.|+++.++|++.++.++.|.++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 578999999999999999 8999999999998767999999875
No 230
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.76 E-value=2.6e-08 Score=82.79 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=64.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------------------------ 311 (361)
..+++|+.|+.+|||+|+.+.|.++++.+.+.+ +.+...+..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999988754 666666531
Q ss_pred ---------------------------------CCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 018045 312 ---------------------------------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 358 (361)
Q Consensus 312 ---------------------------------~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~ 358 (361)
.+ ..++ ++++|.++||+++ +|+ .+.| ..+.+.|.+.|+
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~-~~~a-~~~gv~gtPt~~i--~g~----~~~G-~~~~~~l~~~i~ 169 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQS-MALA-QKLGFNGTPSFVV--EDA----LVPG-FVEQSQLQDAVD 169 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHH-HHHH-HHHTCCSSSEEEE--TTE----EECS-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHH-HHHH-HHcCCccCCEEEE--CCE----EeeC-CCCHHHHHHHHH
Confidence 22 4466 7899999999987 553 3345 688999999998
Q ss_pred Hh
Q 018045 359 AL 360 (361)
Q Consensus 359 ~~ 360 (361)
++
T Consensus 170 ~~ 171 (175)
T 3gyk_A 170 RA 171 (175)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 231
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.73 E-value=4.8e-08 Score=83.21 Aligned_cols=45 Identities=9% Similarity=-0.031 Sum_probs=39.0
Q ss_pred CCCcEEEEEECCCChh-HHhhHHHHHHHHHHhcC---CCeEEEEEEcCC
Q 018045 268 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG---NGVKVGKFRADG 312 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~-C~~~~p~~~~la~~~~~---~~v~~~~vd~~~ 312 (361)
.++++||+||++||++ |+.+.|.+.++.+.+.. .++.++.|++|.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 5789999999999997 99999999998887752 268999998873
No 232
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.72 E-value=1.8e-08 Score=87.08 Aligned_cols=81 Identities=12% Similarity=0.299 Sum_probs=60.9
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-------------------------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA------------------------------------- 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~------------------------------------- 310 (361)
..+.+++.||++||++|+.+.|.++++.+. ++.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 160 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP 160 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCCh
Confidence 467899999999999999999999998752 355554432
Q ss_pred -------CCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 311 -------DGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 311 -------~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+.+ ..++ ++++|.++||+ ++.+|. . +.| ..+.++|.++|+++
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gtPt~-v~~dG~--~--~~G-~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 161 ASCDVDIADH-YALG-VQLGVSGTPAV-VLSNGT--L--VPG-YQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCSCCHHHH-HHHH-HHHTCCSSSEE-ECTTSC--E--EES-CCCHHHHHHHHHHH
T ss_pred hHHHHHHHHH-HHHH-HHcCCCccCEE-EEcCCe--E--ecC-CCCHHHHHHHHHHh
Confidence 122 5677 88999999998 555664 2 234 67889999998764
No 233
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.71 E-value=2.4e-08 Score=83.19 Aligned_cols=66 Identities=14% Similarity=0.200 Sum_probs=54.4
Q ss_pred CCCcEEEEEECCC-ChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------chHHHHHcCCCC
Q 018045 268 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLG 325 (361)
Q Consensus 268 ~~~~vlv~F~a~w-C~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------~~~l~~~~~~v~ 325 (361)
.++++||+||++| |++|+...|.+.++.++ . ++.|+.|+.|.. +..++ +.|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S-GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG-EDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T-TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH-HHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c-CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH-HHhCCc
Confidence 4789999999999 99999999999999988 3 699999988721 14577 789998
Q ss_pred CC---------CeEEEEe-CCC
Q 018045 326 SF---------PTILFFP-KHS 337 (361)
Q Consensus 326 ~~---------Pt~~~~~-~g~ 337 (361)
.. |++++++ +|+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~ 140 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGN 140 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSB
T ss_pred ccccccCCcccceEEEECCCCe
Confidence 77 8888885 454
No 234
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.70 E-value=3.6e-08 Score=84.81 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=62.3
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------------------------ 311 (361)
..+.+++.|+++||++|+.+.|.++++.+. ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 467899999999999999999999997652 3555433221
Q ss_pred --------CCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 018045 312 --------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 361 (361)
Q Consensus 312 --------~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~~ 361 (361)
.+ ..++ ++++|+++||+++ .+|+ .+.| ..+.++|.++|++.+
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gTPt~vi-~nG~----~~~G-~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 161 VKTPNIVKKH-YELG-IQFGVRGTPSIVT-STGE----LIGG-YLKPADLLRALEETA 210 (211)
T ss_dssp CCCSSHHHHH-HHHH-HHHTCCSSCEEEC-TTSC----CCCS-CCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHH-HHHH-HHcCCCcCCEEEE-eCCE----EecC-CCCHHHHHHHHHhcc
Confidence 22 5677 7899999999988 6675 2344 678999999998753
No 235
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.65 E-value=7.7e-08 Score=78.62 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=53.1
Q ss_pred CCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------chHHHHHcCCCCCC
Q 018045 269 QEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGSF 327 (361)
Q Consensus 269 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~v~~~ 327 (361)
+++++|+|| ++||++|....|.|.++.+++++.+ .++.|.+|.. +..++ +.|++...
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 112 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFI-GLLGAKKT 112 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHH-HHHTCBSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHH-HHhCCccc
Confidence 347889987 9999999999999999999998756 8888877532 14577 78999999
Q ss_pred C-------eEEEEeCCC
Q 018045 328 P-------TILFFPKHS 337 (361)
Q Consensus 328 P-------t~~~~~~g~ 337 (361)
| ++++ ++|+
T Consensus 113 p~~g~~~~~~li-~~G~ 128 (159)
T 2a4v_A 113 PLSGSIRSHFIF-VDGK 128 (159)
T ss_dssp SSSCBCCEEEEE-ETTE
T ss_pred ccCCccceEEEE-cCCE
Confidence 8 5555 7776
No 236
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.65 E-value=2.6e-07 Score=72.20 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=79.4
Q ss_pred Cceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCC
Q 018045 250 NLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 328 (361)
Q Consensus 250 ~v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~P 328 (361)
.+..| +.+++++++. .++.++|-|+++||++| .+.|.++|+.+ + ++.|+.++ + .+++ ++|++. .|
T Consensus 22 ~~~~i~s~~e~e~fi~---~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~---~-~~v~-~~~~v~-~~ 87 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIA---ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST---D-SEVL-THYNIT-GN 87 (124)
T ss_dssp CCEECCSHHHHHHHHH---TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC---C-HHHH-HHTTCC-SS
T ss_pred cceEcCCHHHHHHHHh---cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC---h-HHHH-HHcCCC-CC
Confidence 34556 4567888886 78899999999999998 67999999999 5 69998764 3 6788 899998 89
Q ss_pred eEEEEeCCCCCeeecCC---CCCCHHHHHHHHHH
Q 018045 329 TILFFPKHSSKPIKYPS---ERRDVDSLMAFVDA 359 (361)
Q Consensus 329 t~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~ 359 (361)
++++|++.......|.| +..+.++|.+||+.
T Consensus 88 ~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 88 TICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp CEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHH
T ss_pred eEEEEEcCCCCceeecCcccCCCCHHHHHHHHHH
Confidence 99999987655777875 46899999999985
No 237
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.64 E-value=3.6e-08 Score=70.83 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=53.3
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH--HcCCCCCCCeEEEEeCCCCCeeecCCCCCCH
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK--QKLQLGSFPTILFFPKHSSKPIKYPSERRDV 350 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~--~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~ 350 (361)
++.|+++||++|+.+.+.+++. ++.|..+|++.+ +++.. .++++.++|+++ .+|+ .+ .| .+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~~~-~~~~~~~~~~g~~~vP~~~--~~g~--~~--~g--~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVDRV-PEAAEALRAQGFRQLPVVI--AGDL--SW--SG--FRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHTTCCSSCEEE--ETTE--EE--ES--CCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHHHhCCCccCEEE--ECCE--EE--ec--CCH
Confidence 6789999999999999998863 477888999987 55541 258999999983 4564 22 22 567
Q ss_pred HHHHHHHHH
Q 018045 351 DSLMAFVDA 359 (361)
Q Consensus 351 ~~l~~~i~~ 359 (361)
++|.++|++
T Consensus 67 ~~l~~~l~~ 75 (81)
T 1h75_A 67 DMINRLHPA 75 (81)
T ss_dssp HHHGGGSCC
T ss_pred HHHHHHHhc
Confidence 888877754
No 238
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.64 E-value=6.9e-08 Score=68.05 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=54.2
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHH---cCCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQ---KLQLGSFPTILFFPKHSSKPIKYPSERRD 349 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~---~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~ 349 (361)
++.|+++||++|+.+.+.++++ ++.|..+|++.+ +++. + ++++.++|++++ +|+ . ..| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~-~~~~-~~~~~~~~~~vP~l~~--~g~--~--~~g--~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDISLD-DEAR-DYVMALGYVQAPVVEV--DGE--H--WSG--FR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHH-HHHHHTTCBCCCEEEE--TTE--E--EES--CC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECCCC-HHHH-HHHHHcCCCccCEEEE--CCe--E--EcC--CC
Confidence 6789999999999999998864 377888999987 6655 4 799999999874 554 2 223 57
Q ss_pred HHHHHHHHH
Q 018045 350 VDSLMAFVD 358 (361)
Q Consensus 350 ~~~l~~~i~ 358 (361)
.++|.++|+
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888888874
No 239
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=98.64 E-value=7.2e-08 Score=90.24 Aligned_cols=151 Identities=13% Similarity=0.199 Sum_probs=91.3
Q ss_pred hCCcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHHH----HHHhc
Q 018045 8 FGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQA----LVRSK 81 (361)
Q Consensus 8 ~~~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~-~i~~~~p~~~~~~~----~~~~~ 81 (361)
..++++|+||||-||+++ .++.+.+.++..+++|.|.. +-++.++++++++|+ ++.++.-......+ .+...
T Consensus 13 ~~~KVVVA~SGGlDSSv~a~~Lke~G~eViavt~d~Gq~--~Ele~A~~vA~~lGi~~~~VvDl~eef~~~v~~p~i~~n 90 (421)
T 1vl2_A 13 MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK--DDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGN 90 (421)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTT
T ss_pred ccCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEEEcCCH--HHHHHHHHHHHHcCCceEEEEecHHHHHHhhhhHHHhcC
Confidence 347899999999999766 78878888999999999963 446789999999999 78777543222111 11111
Q ss_pred CCC-C-CCc--cchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCc
Q 018045 82 GLF-S-FYE--DGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVA 155 (361)
Q Consensus 82 ~~~-~-~~~--~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~ 155 (361)
... . .+. ...+.|. ..-+..+.+ +.+.+++|.........|....+...+ +..--+.|+.
T Consensus 91 a~yeg~Y~~g~~l~Rp~i----~~~l~~~A~~~Gad~IA~G~~~kgnDq~rf~~~~~al~----------p~~~IiaPl~ 156 (421)
T 1vl2_A 91 AMYEGRYLLGTAIARPLI----AKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALN----------PNLKVISPWK 156 (421)
T ss_dssp CCBTTTBCCHHHHHHHHH----HHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTSEEECGGG
T ss_pred CcccCceeCCCcccHHHH----HHHHHHHHHHcCCCEEEECCeeCCCChHHHHHHHHhcC----------CCCeEEcccC
Confidence 000 0 000 0022232 122333333 788999999863211122211111111 1234678999
Q ss_pred c-------CcHHHHHHHHHhCCCCCC
Q 018045 156 N-------VKGNDIWNFLRTMDVPIN 174 (361)
Q Consensus 156 ~-------W~~~dv~~yi~~~~lp~~ 174 (361)
+ ++.+||.+|.+++|||+.
T Consensus 157 d~~~l~~~lsK~Eir~~A~e~Glp~~ 182 (421)
T 1vl2_A 157 DPEFLAKFKGRTDLINYAMEKGIPIK 182 (421)
T ss_dssp CHHHHHHTC--CHHHHHHHHHTCCCC
T ss_pred chhhccccCCHHHHHHHHHHcCCCcc
Confidence 9 599999999999999985
No 240
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.62 E-value=1.4e-07 Score=79.85 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=39.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 311 (361)
.++++|+.|+++||++|+.+.|.++++.+.+.+ ++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 578899999999999999999999999999987 7999998875
No 241
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.62 E-value=8.2e-08 Score=83.13 Aligned_cols=92 Identities=11% Similarity=0.197 Sum_probs=68.8
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---------------------------hHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---------------------------KEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---------------------------~~l~~ 319 (361)
.++++||+|| ++||++|+...|.|.++.+++++.++.++.|++|..+ ..++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS- 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH-
Confidence 4689999999 9999999999999999999997557999998876420 2455
Q ss_pred HcCCC-----CCCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQL-----GSFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v-----~~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++ ..+|++++++..+.....+.+ ...+.+++.+.|+++
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 66777 368999999654432222222 135788999888865
No 242
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.61 E-value=1e-07 Score=79.71 Aligned_cols=92 Identities=5% Similarity=-0.025 Sum_probs=67.5
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--------------------hHHHHHcCCCCC
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--------------------KEYAKQKLQLGS 326 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~--------------------~~l~~~~~~v~~ 326 (361)
.+++++|+|| ++||++|....|.|.++.+++++.++.++.|.+|..+ ..++ +.|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~-~~~gv~~ 128 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILC-KAFDVIK 128 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHH-HHTTCEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHH-HHcCCcc
Confidence 4678999998 9999999999999999999998767999999886431 3566 6788753
Q ss_pred ------------CCeEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 018045 327 ------------FPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 360 (361)
Q Consensus 327 ------------~Pt~~~~~~g~~~~~~~~~--~~~~~~~l~~~i~~~ 360 (361)
.|++++++..+.....+.+ ...+.+++.+.|+++
T Consensus 129 ~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 129 EKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 6889999644432323322 124567777777765
No 243
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.61 E-value=4.2e-08 Score=96.18 Aligned_cols=166 Identities=14% Similarity=0.178 Sum_probs=98.4
Q ss_pred CcEEEEecchHHHHHH-HHHHH-cCCCceEEEccCCCC-cHHHHHHHHHHHHHh-CCcEEEEcCChHHHHHHHHhcCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHL-TGRPFRVFSLDTGRL-NPETYRFFDEVEKHF-GIRIEYMFPDAVEVQALVRSKGLFS 85 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~-~~~~i~v~~~dtg~~-~pet~~~v~~~~~~~-g~~i~~~~p~~~~~~~~~~~~~~~~ 85 (361)
++++|++|||.||+++ +|+.+ .+.++.++|+|+|.. ..|..+.++.+++++ |++++++........ ...+..
T Consensus 256 ~~vvvalSGGvDSsv~a~ll~~~~G~~v~~v~vd~g~~~~~e~~~~~~~~~~~l~gi~~~~vd~~~~f~~---~l~g~~- 331 (556)
T 3uow_A 256 HYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFPDMNITKIDASENFLS---NLQGVT- 331 (556)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHHHHCTTSEEEEEECHHHHHH---HTTTCC-
T ss_pred ceEEEEcccCCCHHHHHHHHHHHhCCeEEEEEEecCCCChHHHHHHHHHHHHhcCCCCeEEeccHHHHHH---hhcCCC-
Confidence 6899999999999877 77766 477899999999964 456666668899999 999998855432111 112221
Q ss_pred CCccchhchhhccccHHHHHHHcc---C---CEEEEeeeccCCccCccCC---CceecCCCCcCCcCCCCCeEEEeeCcc
Q 018045 86 FYEDGHQECCRVRKVRPLRRALKG---L---RAWITGQRKDQSPGTRSEI---PVVQVDPVFEGLEGGVGSLVKWNPVAN 156 (361)
Q Consensus 86 ~~~~~~~~cc~~~K~~pl~~~~~~---~---~~~i~G~R~~Es~~~R~~~---~~~~~~~~~~~~~~~~~~~~~~~Pi~~ 156 (361)
-+...... |....+.-+.+..+. . +.+++|+..+|-...+... ..+.......+.. .......+.||.+
T Consensus 332 ~pe~kr~i-ig~~f~~vf~~~A~~~~~~~~~~~la~Gt~y~D~ies~~~~g~~~~iks~~n~~gl~-~~~~~~li~PL~~ 409 (556)
T 3uow_A 332 DPEQKRKI-IGKLFIEEFEKAVNNIDIDINKTFLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLP-KNLKFKLFEPFKY 409 (556)
T ss_dssp CHHHHHHH-HHHHHHHHHHHHHHTTCCCGGGEEEECCCCHHHHHHHSCC--------------------CCCEEECTTTT
T ss_pred ChHHHHHH-HHHHHHHHHHHHHHHcCCcccccccccCccChHHHhhcccccccceecccccccccc-cccccceEeeccc
Confidence 11111122 222233444554442 2 5788898665532111110 0000000000000 0012446899999
Q ss_pred CcHHHHHHHHHhCCCCCCccccCCC
Q 018045 157 VKGNDIWNFLRTMDVPINSLHSQGY 181 (361)
Q Consensus 157 W~~~dv~~yi~~~~lp~~~lY~~g~ 181 (361)
++++||.++.++.|||+.-.+++-|
T Consensus 410 l~K~EVr~la~~lGlp~~~~~r~P~ 434 (556)
T 3uow_A 410 LFKDDVKTLSRELNLPEEITNRHPF 434 (556)
T ss_dssp CCHHHHHHHHHTTTCCHHHHHCCCC
T ss_pred CcHHHHHHHHHHcCCCHHHhCCCCC
Confidence 9999999999999999766666633
No 244
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.58 E-value=8.6e-08 Score=84.29 Aligned_cols=92 Identities=18% Similarity=0.154 Sum_probs=69.1
Q ss_pred CCC-cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------------chHHHHH
Q 018045 268 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------------QKEYAKQ 320 (361)
Q Consensus 268 ~~~-~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------------~~~l~~~ 320 (361)
.++ .+|+.|+++||++|....+.+.+++++|+..++.++.|++|.. +..++ +
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia-~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA-R 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH-H
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH-H
Confidence 356 4566889999999999999999999999865799999998652 13577 7
Q ss_pred cCCCC-------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 321 KLQLG-------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 321 ~~~v~-------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
.|++. .+|++++++..+.......+ ..++.++|...|+++
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 88887 89999999644432222222 125889999998876
No 245
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.56 E-value=3.6e-07 Score=78.19 Aligned_cols=43 Identities=19% Similarity=0.122 Sum_probs=39.0
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 311 (361)
.++++||+|||+||++| ...|.|+++.++|++.++.++.|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 57899999999999999 68899999999998767999999875
No 246
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.56 E-value=5.1e-08 Score=79.67 Aligned_cols=92 Identities=16% Similarity=0.275 Sum_probs=62.1
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--------------------hHHHHHcCCCC-
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--------------------KEYAKQKLQLG- 325 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~--------------------~~l~~~~~~v~- 325 (361)
.++.++|+|| ++||++|+...|.+.++.++++..++.++.|+.|..+ .+++ +.|+|.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~-~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVV-KKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHH-HHcCCcc
Confidence 5789999999 9999999999999999999988767899988876531 3466 677763
Q ss_pred ----------CCCeEEEEeCCCCCeeec----CCCCCCHHHHHHHHHHh
Q 018045 326 ----------SFPTILFFPKHSSKPIKY----PSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ----------~~Pt~~~~~~g~~~~~~~----~~~~~~~~~l~~~i~~~ 360 (361)
..|++++++..+.....+ ..+..+.+++.+.|++|
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 367788885433222221 12345789999999876
No 247
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.55 E-value=2.1e-07 Score=78.27 Aligned_cols=92 Identities=12% Similarity=0.086 Sum_probs=67.7
Q ss_pred CCCcEEEEEEC-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc------------------------hHHHHHcC
Q 018045 268 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ------------------------KEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~------------------------~~l~~~~~ 322 (361)
.++++||+||+ +||++|....|.|.++.+++++.++.++.|.++..+ ..++ +.|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALT-RNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHH-HHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHH-HHh
Confidence 46899999995 999999999999999999997657999999876421 2355 567
Q ss_pred CCC------CCCeEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 018045 323 QLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~------~~Pt~~~~~~g~~~~~~~~~~---~~~~~~l~~~i~~~ 360 (361)
++. .+|++++++..+.....+.+. ..+.+++.+.|+++
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 775 369999996444333333321 23688899888865
No 248
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.53 E-value=2.4e-07 Score=79.62 Aligned_cols=92 Identities=11% Similarity=0.161 Sum_probs=68.9
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---------------------------hHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---------------------------KEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---------------------------~~l~~ 319 (361)
.++++||+|| ++||++|....|.|.++.++++..++.++.|.+|..+ ..++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH-
Confidence 4689999999 9999999999999999999997657999999875420 2455
Q ss_pred HcCCCC------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.+ ...+.+++.+.|+++
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 667774 58999999654432322222 125788898888765
No 249
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.50 E-value=2.3e-07 Score=78.34 Aligned_cols=42 Identities=26% Similarity=0.343 Sum_probs=37.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 310 (361)
..+++|+.|+.+||++|+.+.|.+.++.+.+.+ ++.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 578899999999999999999999999999987 788876655
No 250
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.49 E-value=2.4e-07 Score=81.32 Aligned_cols=85 Identities=15% Similarity=0.289 Sum_probs=63.7
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~------------------------------------ 311 (361)
..+.+|+.|+.+|||+|+.+.+.+.++.+. + +|.|..+...
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 356789999999999999999999987764 3 5777665541
Q ss_pred --------------CCchHHHHHcCCCCCCCeEEEEeC-CCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 312 --------------GDQKEYAKQKLQLGSFPTILFFPK-HSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 312 --------------~~~~~l~~~~~~v~~~Pt~~~~~~-g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
.+ ..++ ++++|.++||+++.+. |+ .....| ..+.+.|.++|++.
T Consensus 173 ~~~~~~~~~~~~v~~~-~~l~-~~~gv~gtPt~vi~~~~G~--~~~~~G-~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 173 VPANVSTEQMKVLSDN-EKLM-DDLGANVTPAIYYMSKENT--LQQAVG-LPDQKTLNIIMGNK 231 (241)
T ss_dssp CCSSCCHHHHHHHHHH-HHHH-HHHTCCSSCEEEEEETTTE--EEEEES-SCCHHHHHHHTTC-
T ss_pred ccccCCHHHHHHHHHH-HHHH-HHcCCCCCCEEEEECCCCC--EEEecC-CCCHHHHHHHHHHH
Confidence 11 3466 7899999999999863 43 334455 68899999988764
No 251
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.49 E-value=3.1e-07 Score=79.75 Aligned_cols=97 Identities=16% Similarity=0.192 Sum_probs=80.0
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 249 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
..+++| +.+++++++. .++.++|-|+++| |..+.+.|.++|+.+ . .+.|+.. .+ .+++ ++|++.+
T Consensus 9 ~~~~~l~s~~~~~~~l~---~~~v~vVgff~~~---~~~~~~~f~~~A~~l-~-~~~F~~t---~~-~~v~-~~~~v~~- 74 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIA---ATEVAVIGFFQDL---EIPAVPILHSMVQKF-P-GVSFGIS---TD-SEVL-THYNITG- 74 (227)
T ss_dssp CCCEECCSHHHHHHHHH---TSSEEEEEECSCS---CSTHHHHHHHHTTTC-T-TSEEEEE---CC-HHHH-HHTTCCS-
T ss_pred CCCeeeCCHHHHHHHHh---cCCeEEEEEecCC---CchhHHHHHHHHHhC-C-CceEEEE---CC-HHHH-HHcCCCC-
Confidence 345666 5588999887 7899999999998 567899999999999 4 6899874 35 7899 8999998
Q ss_pred CeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHH
Q 018045 328 PTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDA 359 (361)
Q Consensus 328 Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~ 359 (361)
|++++|+++......|.+ |.++.++|.+||+.
T Consensus 75 p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~ 109 (227)
T 4f9z_D 75 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 109 (227)
T ss_dssp SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHH
T ss_pred CeEEEEEecCcccccccccccCCCCHHHHHHHHHH
Confidence 999999976544677875 36899999999975
No 252
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.46 E-value=6.5e-07 Score=74.04 Aligned_cols=92 Identities=11% Similarity=0.106 Sum_probs=67.5
Q ss_pred CCCcEEEEEECCCCh-hHHhhHHHHHHHHHHhcC--CCeEEEEEEcCC-C-----------------------------c
Q 018045 268 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRADG-D-----------------------------Q 314 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~-~-----------------------------~ 314 (361)
.+++++|+||++||+ .|....|.+.++.+.++. .++.++.|.+|. . .
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 478999999999997 699999999999999963 368888888762 0 0
Q ss_pred hHHHHHcCC---------CCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQ---------LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~---------v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
..++ +.|+ +...|++++++..+.....+.|...+.++|.+.|+++
T Consensus 107 ~~~~-~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLL-DAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHH-HHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHH-HHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 2345 4544 3456888888544433334455457899999999875
No 253
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=98.46 E-value=2.4e-07 Score=92.88 Aligned_cols=164 Identities=9% Similarity=0.107 Sum_probs=95.1
Q ss_pred CcEEEEecchHHHHHH-HHHHHc-C-CCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 86 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~-~-~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~ 86 (361)
+++++++|||.||+++ +|+.+. + .++.++|+|.|.......+.++++++++|++++++..+.. + ........
T Consensus 241 ~~vvv~lSGGvDSsVla~Ll~~alG~~~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvdi~~~-f----~~~~~~l~ 315 (697)
T 2vxo_A 241 SKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHS-F----YNGTTTLP 315 (697)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHSCGGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEECHHH-H----HTCCCBCC
T ss_pred cceEEEccCchHHHHHHHHHHHhcCCceEEEEEeccccCCcchHHHHHHHHHHhCCcEEEecchHH-H----Hhhhhhhc
Confidence 6899999999999877 777775 6 6789999999976555678899999999999988754321 1 11100000
Q ss_pred -------C----c-cchhchhhccccHH----HHHH----Hc--cCC----EEEEeeeccCCccCccCCCceecCCCCcC
Q 018045 87 -------Y----E-DGHQECCRVRKVRP----LRRA----LK--GLR----AWITGQRKDQSPGTRSEIPVVQVDPVFEG 140 (361)
Q Consensus 87 -------~----~-~~~~~cc~~~K~~p----l~~~----~~--~~~----~~i~G~R~~Es~~~R~~~~~~~~~~~~~~ 140 (361)
+ . .....|-...|... +.+. .+ +.+ .+++|..++|.. ..............+.
T Consensus 316 ~~~~~~~Y~~g~~~~l~~v~~~~~kR~iig~~~~~v~~~~A~~~g~~~~~~~LatG~~~~D~i-Es~~~~l~~g~~~iks 394 (697)
T 2vxo_A 316 ISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLI-ESASLVASGKAELIKT 394 (697)
T ss_dssp ----------CBCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTCCCTTSEEEECCCSSCCSB-CCHHHHHHSCCCGGGS
T ss_pred ccccccchhcccCcCcccccCHHHHHhHHHHHHHHHHHHHHHHcCCCcccEEEEEeccChhhh-hhhhhhhhcCcccccc
Confidence 0 0 00111222223321 2111 12 334 788999888652 2111000000000000
Q ss_pred Cc--CC-----CCCeEEEeeCccCcHHHHHHHHHhCCCCCCccccC
Q 018045 141 LE--GG-----VGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQ 179 (361)
Q Consensus 141 ~~--~~-----~~~~~~~~Pi~~W~~~dv~~yi~~~~lp~~~lY~~ 179 (361)
.+ .+ ..+...+.||.++++.||.+|.++.|||..-.+.+
T Consensus 395 ~~nv~g~~~~~~~~~~~i~PL~~L~K~EVr~la~~lGlP~~i~~r~ 440 (697)
T 2vxo_A 395 HHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGLPEELVSRH 440 (697)
T ss_dssp CCSSCHHHHHHHHTTCEECGGGGSCHHHHHHHHHHTTCCHHHHTCC
T ss_pred ccccchhhHHhccCCEEEEecccCCHHHHHHHHHHcCCCcceeeCC
Confidence 00 00 00123689999999999999999999998544444
No 254
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.45 E-value=8.2e-08 Score=79.09 Aligned_cols=92 Identities=12% Similarity=0.236 Sum_probs=67.6
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--------------------hHHHHHcCCCC-
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--------------------KEYAKQKLQLG- 325 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~--------------------~~l~~~~~~v~- 325 (361)
++++++|.|| ++||++|....|.+.++.+++++.++.++.|+.|..+ .+++ +.|+|.
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~-~~ygv~~ 110 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVI-KLYNVYH 110 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCEE
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHH-HHcCCcc
Confidence 6889999998 9999999999999999999998767999999876431 3566 678773
Q ss_pred ---------CCCeEEEEeCCCCCeeecC----CCCCCHHHHHHHHHHh
Q 018045 326 ---------SFPTILFFPKHSSKPIKYP----SERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ---------~~Pt~~~~~~g~~~~~~~~----~~~~~~~~l~~~i~~~ 360 (361)
..|++++++..+.+...+. .+..+.+++.+.|+++
T Consensus 111 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 111 EDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 3688888854443222211 1234788888888765
No 255
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.44 E-value=1.1e-06 Score=72.05 Aligned_cols=90 Identities=10% Similarity=0.064 Sum_probs=64.5
Q ss_pred CCCcEEEEEEC-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------hHHHHHcCCC
Q 018045 268 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------KEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----------------------~~l~~~~~~v 324 (361)
.+++++|+||+ +||++|....|.+.++.+++ . ++.++.|+.|..+ ..++ +.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFG-RDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHH-HHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHH-HHhCC
Confidence 47899999995 99999999999999999888 4 6888888875420 2455 56666
Q ss_pred C----C--CCeEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 018045 325 G----S--FPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~----~--~Pt~~~~~~g~~~~~~~~~----~~~~~~~l~~~i~~~ 360 (361)
. + .|++++++..+.....+.| ...+.+++.+.|+++
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred ccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 5 3 3999999644433333322 234568888888764
No 256
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.43 E-value=6.9e-07 Score=78.28 Aligned_cols=92 Identities=11% Similarity=0.177 Sum_probs=69.8
Q ss_pred CCCcEEEEEEC-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---------------------------hHHHH
Q 018045 268 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---------------------------KEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~a-~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---------------------------~~l~~ 319 (361)
.++++||+||+ +||++|....|.|.++.+++++.++.++.|.+|... ..++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~- 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS- 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH-
Confidence 47899999999 999999999999999999998767999999876421 3466
Q ss_pred HcCCCC------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.+ ...+.+++.+.|+.+
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 678887 68999999644432222111 135788888888765
No 257
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.37 E-value=1.2e-06 Score=76.69 Aligned_cols=90 Identities=13% Similarity=0.255 Sum_probs=65.2
Q ss_pred CCCcEEEEEE-CCCChhHH-hhHHHHHHHHHHhcCCCe-EEEEEEcCCC---------------------chHHHHHcCC
Q 018045 268 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGV-KVGKFRADGD---------------------QKEYAKQKLQ 323 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~-~~~p~~~~la~~~~~~~v-~~~~vd~~~~---------------------~~~l~~~~~~ 323 (361)
.+++++|+|| ++||++|. ...|.|.++++.+++.++ .++.|+.+.. +..++ +.|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFT-EGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHH-HHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHH-HHhC
Confidence 4789999999 99999999 999999999999976579 8999987642 03466 6788
Q ss_pred CC-----------CCCeEEEEeCCCCCeeecCCC--C------CCHHHHHHHHHH
Q 018045 324 LG-----------SFPTILFFPKHSSKPIKYPSE--R------RDVDSLMAFVDA 359 (361)
Q Consensus 324 v~-----------~~Pt~~~~~~g~~~~~~~~~~--~------~~~~~l~~~i~~ 359 (361)
+. ..|+.+++++|+.. ..+.+. . .+.+++.+.|+.
T Consensus 111 v~~~~~~~g~~~~~~p~t~li~~G~i~-~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLVKNGVVE-KMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEE-EEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred ceeecccccCcccceeEEEEEECCEEE-EEEEeccCCCccceecCHHHHHHHhhh
Confidence 75 35877777777632 222221 1 467777777653
No 258
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.36 E-value=9.8e-07 Score=74.00 Aligned_cols=92 Identities=12% Similarity=0.218 Sum_probs=62.2
Q ss_pred CCCcE-EEEEECCCChhHHh-hHHHHHHHHHHhcCCCeE-EEEEEcCCCc----------------------hHHHHHcC
Q 018045 268 RQEPW-LVVLYAPWCQFCQA-MEGSYVELADKLAGNGVK-VGKFRADGDQ----------------------KEYAKQKL 322 (361)
Q Consensus 268 ~~~~v-lv~F~a~wC~~C~~-~~p~~~~la~~~~~~~v~-~~~vd~~~~~----------------------~~l~~~~~ 322 (361)
.++.+ |+.|+++||++|+. ..|.|+++++++++.++. ++.|+.+... ..++ +.|
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 133 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFT-KAI 133 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHH-HHc
Confidence 35654 55566999999999 799999999999876788 8888876520 3466 678
Q ss_pred CCC-----------CCCeEEEEeCCCCCeeecC--CCCCCHHHHHHHHHHh
Q 018045 323 QLG-----------SFPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~-----------~~Pt~~~~~~g~~~~~~~~--~~~~~~~~l~~~i~~~ 360 (361)
++. ..|+.+++++|+....... .+..+..++.+.|++|
T Consensus 134 Gv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 134 GMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp TCEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred CCceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 775 3577777787764222221 1345556666666653
No 259
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.33 E-value=1.3e-06 Score=71.95 Aligned_cols=70 Identities=11% Similarity=0.120 Sum_probs=53.7
Q ss_pred CCCcEEEEEE-CCCChhHHh-hHHHHHHHHHHhcCCCe-EEEEEEcCCCc----------------------hHHHHHcC
Q 018045 268 RQEPWLVVLY-APWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADGDQ----------------------KEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~vd~~~~~----------------------~~l~~~~~ 322 (361)
.+++++|+|| ++||++|+. ..|.|+++++++++.++ .++.|+.+... ..++ +.|
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~~ 108 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFT-KAV 108 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHH-HHc
Confidence 4677888887 999999999 99999999999976579 99999876420 3456 667
Q ss_pred CCCCC-----------CeEEEEeCCCC
Q 018045 323 QLGSF-----------PTILFFPKHSS 338 (361)
Q Consensus 323 ~v~~~-----------Pt~~~~~~g~~ 338 (361)
++... |+.+++++|+.
T Consensus 109 gv~~~~~~~~g~~~~~p~t~lI~~G~I 135 (167)
T 2wfc_A 109 DMELDLSAVLGNVRSKRYSLVIEDGVV 135 (167)
T ss_dssp TCEECCHHHHSSCEECCEEEEEETTEE
T ss_pred CCccccccccCcccceEEEEEEeCCEE
Confidence 77543 87777777763
No 260
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.32 E-value=8.5e-07 Score=66.94 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=43.1
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc------hHHHHHcCCCCCCCeEEEEeCCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~------~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
.++.|+++||++|+.+.+.|+++...++ + |..+|++.+. ..+. +.+++.++|++ |.+|+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~--~--~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~i--~~~g~ 77 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG--L--LEFVDITATSDTNEIQDYLQ-QLTGARTVPRV--FIGKE 77 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT--S--EEEEEGGGSTTHHHHHHHHH-HHHSCCCSCEE--EETTE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC--c--cEEEEccCCCCHHHHHHHHH-HHhCCCCcCeE--EECCE
Confidence 3677999999999999999988654432 2 5556766541 2467 78899999997 34665
No 261
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.32 E-value=4.5e-07 Score=69.80 Aligned_cols=58 Identities=14% Similarity=0.214 Sum_probs=44.9
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeE---EEEEEcCCCc------hHHHHHcCCCCCCCeEEEEeCCC
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQ------KEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~---~~~vd~~~~~------~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
...++.|+++||++|+.+.+.|+++. +. |..+|++.+. ..+. +.+++.++|++++ +|+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~-------~~~~~~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~v~i--~g~ 84 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFS-------FKRGAYEIVDIKEFKPENELRDYFE-QITGGKTVPRIFF--GKT 84 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSC-------BCTTSEEEEEGGGSSSHHHHHHHHH-HHHSCCSSCEEEE--TTE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcC-------CCcCceEEEEccCCCChHHHHHHHH-HHhCCCCcCEEEE--CCE
Confidence 34578899999999999999887643 44 7788888761 2677 7899999998743 565
No 262
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.31 E-value=9.2e-06 Score=67.05 Aligned_cols=44 Identities=20% Similarity=0.409 Sum_probs=37.9
Q ss_pred CCCcEEEEEECCCCh-hHHhhHHHHHHHHHHhcC--CCeEEEEEEcC
Q 018045 268 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRAD 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~vd~~ 311 (361)
.+|++||+||.+||+ .|....+.+.++.+.++. .++.++.|.+|
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 589999999999996 799999999999888854 36888888776
No 263
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.29 E-value=1.9e-06 Score=71.45 Aligned_cols=92 Identities=12% Similarity=0.139 Sum_probs=61.3
Q ss_pred CCCcEEEEEE-CCCChhHH-hhHHHHHHHHHHhcCCCeEEEE-EEcCCC----------------------chHHHHHcC
Q 018045 268 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGVKVGK-FRADGD----------------------QKEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~-~~~p~~~~la~~~~~~~v~~~~-vd~~~~----------------------~~~l~~~~~ 322 (361)
.+++++|.|| ++||++|. ...|.|.+++++|+..++.++. |..|.. +.+++ +.|
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 120 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFG-KET 120 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHH-HHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHH-HHh
Confidence 3565655555 99999999 5899999999999875677775 766542 03566 677
Q ss_pred CCC-------------CCCeEEEEeCCCCCeeecC--CCCCCHHHHHHHHHHh
Q 018045 323 QLG-------------SFPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~-------------~~Pt~~~~~~g~~~~~~~~--~~~~~~~~l~~~i~~~ 360 (361)
++. ..|+.+++++|+....... +..++.++....|++|
T Consensus 121 Gv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 121 DLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp TCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred CCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 764 3599999986653222111 1135666777666654
No 264
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.29 E-value=1e-06 Score=72.41 Aligned_cols=68 Identities=12% Similarity=0.144 Sum_probs=52.9
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------chHHHHHcCCC
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~v 324 (361)
.+++++|+|| +.||++|....|.+.++.+++ . ++.++.|+.|.. +..++ +.|++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 118 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALH-SQLGV 118 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHH-HHTTC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHH-HHhCc
Confidence 4689999999 899999999999999999998 4 688888876532 13466 67777
Q ss_pred CC---------CCeEEEEeCCCC
Q 018045 325 GS---------FPTILFFPKHSS 338 (361)
Q Consensus 325 ~~---------~Pt~~~~~~g~~ 338 (361)
.. .|++++++..+.
T Consensus 119 ~~~~~~~~g~~~p~~~liD~~G~ 141 (165)
T 1q98_A 119 DIQTGPLAGLTSRAVIVLDEQNN 141 (165)
T ss_dssp EECSSTTTTSBCCEEEEECTTSB
T ss_pred eecccccCCccceeEEEEcCCCE
Confidence 43 499999964443
No 265
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.28 E-value=9.7e-06 Score=75.01 Aligned_cols=109 Identities=9% Similarity=0.044 Sum_probs=84.5
Q ss_pred CCceecCcccHHHHHhhcCC-CCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCchHHHH---HcCC
Q 018045 249 QNLVTLNRTGMENLARLDHR-QEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAK---QKLQ 323 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~---~~~~ 323 (361)
+.|.++|.+++.++.. +. .+..++.|+.++|+.|..+.+.++++|+++.+ .++.|+.+|++.. ..++. +.|+
T Consensus 226 p~v~elt~~~~~~~~~--~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~-~~~~~~~~~~~g 302 (350)
T 1sji_A 226 PTLRRLRPEDMFETWE--DDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDF-PLLVAYWEKTFK 302 (350)
T ss_dssp CSEEECCTTTHHHHHH--SCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGC-HHHHHHHHHHCC
T ss_pred cchhhcChhhHHHHhc--CCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhh-HHHHHHHHhhcC
Confidence 5789999999998765 11 25566779999999999999999999999974 4699999999988 66551 4688
Q ss_pred CC-CCCeEEEEeCCCCCeee--cCC--CCCCHHHHHHHHHHh
Q 018045 324 LG-SFPTILFFPKHSSKPIK--YPS--ERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~-~~Pt~~~~~~g~~~~~~--~~~--~~~~~~~l~~~i~~~ 360 (361)
+. ++|++++++..+..... +.. +..+.++|.+||+++
T Consensus 303 i~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 303 IDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp SCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred CCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 87 58999999763321233 221 368999999999875
No 266
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=98.26 E-value=1.5e-06 Score=77.52 Aligned_cols=143 Identities=12% Similarity=0.065 Sum_probs=80.7
Q ss_pred CcEEEEecchHHHHHH-HHHHHcC---------CCceEEEccCCCCcHHHHHHHHHHHHHhCC-cEEEEcCCh--HHHHH
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTG---------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDA--VEVQA 76 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~---------~~i~v~~~dtg~~~pet~~~v~~~~~~~g~-~i~~~~p~~--~~~~~ 76 (361)
.+++|++|||.||+++ .|+.+.. .++..++++.+... ..+.++++++.+|+ +++++.-.. ..+..
T Consensus 39 ~~vvvgLSGGvDSsv~a~La~~a~~~lg~~~~~~~v~av~~~~~~~~--d~~~A~~va~~lgi~~~~~i~i~~~~~~~~~ 116 (271)
T 1kqp_A 39 KGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQ--DEDDAQLALKFIKPDKSWKFDIKSTVSAFSD 116 (271)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSCT--THHHHHHHHHHHCCSEEEECCCHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEeCCCCCC--CHHHHHHHHHhcCCCeEEEeccHHHHHHHHH
Confidence 5899999999999877 6666543 35677888876432 47889999999998 776653221 11111
Q ss_pred HHHh-cCCCCCCccchhchhh--ccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEE
Q 018045 77 LVRS-KGLFSFYEDGHQECCR--VRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 151 (361)
Q Consensus 77 ~~~~-~~~~~~~~~~~~~cc~--~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (361)
.... .+.+ ..+...|.. ..+...+..+.. +..++-||. .+|.. ..... .++ .+.--+
T Consensus 117 ~l~~~~~~~---~~~~~~~N~~aR~r~~~l~~~A~~~g~lvl~tgn-~~E~~---~Gy~t-----~~g------d~~~~~ 178 (271)
T 1kqp_A 117 QYQQETGDQ---LTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDH-AAEAV---TGFFT-----KYG------DGGADL 178 (271)
T ss_dssp HHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHT---TTCSC-----TTT------TTCCSB
T ss_pred HHhhhcCCC---CcchhhhhHHHHHHHHHHHHHHHHCCCEEEECcc-HHHhc---cCCcc-----ccc------cccccc
Confidence 1111 1321 112222221 123333333333 333333443 44431 11111 111 011238
Q ss_pred eeCccCcHHHHHHHHHhCCCC
Q 018045 152 NPVANVKGNDIWNFLRTMDVP 172 (361)
Q Consensus 152 ~Pi~~W~~~dv~~yi~~~~lp 172 (361)
.||.+++..||+...+..|+|
T Consensus 179 ~Pl~~l~K~eVr~la~~lglp 199 (271)
T 1kqp_A 179 LPLTGLTKRQGRTLLKELGAP 199 (271)
T ss_dssp CTTTTCCHHHHHHHHHHTTCC
T ss_pred cccccCCHHHHHHHHHHcCCC
Confidence 899999999999999999987
No 267
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.26 E-value=6.4e-06 Score=71.29 Aligned_cols=89 Identities=19% Similarity=0.224 Sum_probs=65.1
Q ss_pred cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc------------------------------hHHHHH
Q 018045 271 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ------------------------------KEYAKQ 320 (361)
Q Consensus 271 ~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~------------------------------~~l~~~ 320 (361)
.+|+.|+++||++|....+.+.+++++++..++.++.|.+|... ..++ +
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va-~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA-I 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH-H
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH-H
Confidence 56666789999999999999999999998767999998876420 2455 6
Q ss_pred cCCCC------------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 321 KLQLG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 321 ~~~v~------------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
.|++. .+|++++++..+.....+.+ ..++.+++...|+.+
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 67763 37999999654433222221 136889999988876
No 268
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.26 E-value=2.7e-06 Score=69.85 Aligned_cols=89 Identities=12% Similarity=0.081 Sum_probs=63.5
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------hHHHHHcCCC
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------KEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----------------------~~l~~~~~~v 324 (361)
.+++++|+|| +.||++|....|.++++.++ . ++.++.|..|..+ ..++ +.|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 120 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFG-ENYGV 120 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHH-HHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHH-HHhCC
Confidence 4788999999 78999999999999999877 3 5888888765421 3455 56777
Q ss_pred CC------CCeEEEEeCCCCCeee-c---CCCCCCHHHHHHHHHHh
Q 018045 325 GS------FPTILFFPKHSSKPIK-Y---PSERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~~------~Pt~~~~~~g~~~~~~-~---~~~~~~~~~l~~~i~~~ 360 (361)
.. .|++++++..+..... + .....+.+++.+.|+++
T Consensus 121 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 121 VMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp EETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred ccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 64 8999999644432222 2 12245678888888764
No 269
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.25 E-value=1.3e-06 Score=77.07 Aligned_cols=92 Identities=11% Similarity=0.159 Sum_probs=68.4
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---------------------------hHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---------------------------KEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---------------------------~~l~~ 319 (361)
.++.+||+|| ++||++|....|.|.+++++|++.++.++.|.+|... ..++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va- 168 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 168 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHH-
Confidence 4789999999 9999999999999999999998767999999886431 2455
Q ss_pred HcCCCC------CCCeEEEEeCCCCCeeecC---CCCCCHHHHHHHHHHh
Q 018045 320 QKLQLG------SFPTILFFPKHSSKPIKYP---SERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~~~~~~---~~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+. ....+.+++.+.|+.+
T Consensus 169 ~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 169 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 667774 4799999964443222211 1236788888888765
No 270
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=98.24 E-value=1.3e-06 Score=86.55 Aligned_cols=142 Identities=17% Similarity=0.189 Sum_probs=89.2
Q ss_pred CcEEEEecchHHHHHH-HHHHHc-C-CCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 86 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~-~-~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~~~~ 86 (361)
++++|++|||.||+++ .|+.+. + .++..++++++...+++.+.++++++++|++++++.-.. .+..+........+
T Consensus 327 ~~vvvglSGGvDSsv~a~la~~alG~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~i~~-~~~~~~~~l~~~~~ 405 (590)
T 3n05_A 327 RSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEP-MFDAYMASLGLTGL 405 (590)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECCSHH-HHHHHHHHHCCCTH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHhCcccEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEEChH-HHHHHHHHhcccch
Confidence 6899999999999877 677664 6 678899999998889999999999999999988774332 22333222211000
Q ss_pred CccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHHHHHH
Q 018045 87 YEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWN 164 (361)
Q Consensus 87 ~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dv~~ 164 (361)
.........+...+..+.. +..++.|| .++|.. . .......+ ..--+.||.+++..+|+.
T Consensus 406 ---~~~n~~ar~r~~~l~~~A~~~g~~vl~TG-n~se~~-~--Gy~t~~gd-----------~~~~~~Pl~~l~K~eVr~ 467 (590)
T 3n05_A 406 ---AEENLQSRLRGTTLMAISNQEGHIVLAPG-NKSELA-V--GYSTLYGD-----------SVGAYGPIKDVYKTSIFR 467 (590)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHTCEEBCCC-CHHHHH-H--TCCCSSCT-----------TSCSBCTTTTSCHHHHHH
T ss_pred ---hhhHHHHHHHHHHHHHHHHhcCCEEEeCC-CHHHHh-c--CchhhcCC-----------CccceeecCCCcHHHHHH
Confidence 0001111122333333333 45677788 555542 1 11110011 112378999999999999
Q ss_pred HHHhCC
Q 018045 165 FLRTMD 170 (361)
Q Consensus 165 yi~~~~ 170 (361)
..+..|
T Consensus 468 la~~lg 473 (590)
T 3n05_A 468 LAEWRN 473 (590)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 998776
No 271
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.23 E-value=3.8e-06 Score=69.27 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=63.6
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--hHHHH------------------HcCCCC-
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAK------------------QKLQLG- 325 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~--~~l~~------------------~~~~v~- 325 (361)
.+++++|+|| ++||++|....|.+.++.+++ . ++.++.|.+|..+ ...++ +.|++.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 123 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLI 123 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGGGGGTCBB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcHHHhCCEe
Confidence 4789999999 899999999999999999988 4 7999999886531 11220 233332
Q ss_pred --------CCCeEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 018045 326 --------SFPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 --------~~Pt~~~~~~g~~~~~~~~~----~~~~~~~l~~~i~~~ 360 (361)
..|++++++..+.....+.+ ...+.+++.+.|+++
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 15899999644433333322 245678899988876
No 272
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.22 E-value=1.5e-06 Score=73.82 Aligned_cols=67 Identities=12% Similarity=0.167 Sum_probs=52.6
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------chHHHHHcCCC
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 324 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~~~~~v 324 (361)
.+++++|+|| +.||++|....|.++++.+++ . ++.++.|..|.. +..++ +.|++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~-~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~-~~ygv 153 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E-NTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFK-QAYGV 153 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHH-HHTTC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C-CCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHH-HHhCc
Confidence 5789999999 789999999999999999999 4 699998887642 13455 66776
Q ss_pred C---------CCCeEEEEeCCC
Q 018045 325 G---------SFPTILFFPKHS 337 (361)
Q Consensus 325 ~---------~~Pt~~~~~~g~ 337 (361)
. ..|++++++..+
T Consensus 154 ~~~~~~~~g~~~p~~~lID~~G 175 (200)
T 3zrd_A 154 AITEGPLAGLTARAVVVLDGQD 175 (200)
T ss_dssp EECSSTTTTSBCCEEEEECTTS
T ss_pred eeecccCCCccccEEEEECCCC
Confidence 4 369999995443
No 273
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=1.4e-05 Score=66.37 Aligned_cols=105 Identities=13% Similarity=0.103 Sum_probs=77.1
Q ss_pred cCcccHHHHHhhc-----CCCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCc-----------
Q 018045 254 LNRTGMENLARLD-----HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ----------- 314 (361)
Q Consensus 254 l~~~~f~~~~~~~-----~~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~~----------- 314 (361)
.-..+|++.++.. ++.|+++|+++++||..|..+.... +++.+.++. ++.+...|++..+
T Consensus 35 F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~e~~~~~~~~~~~ 113 (178)
T 2ec4_A 35 FFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCNR 113 (178)
T ss_dssp CCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSHHHHHHHHHHHHH
T ss_pred eeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCchhhhhhhhhhhh
Confidence 3457788777654 4689999999999999999998654 667777776 7999999998762
Q ss_pred ---hHHHH--HcCCCCCCCeEEEEeCC--CCCeeecCCCCCCHHHHHHHHHH
Q 018045 315 ---KEYAK--QKLQLGSFPTILFFPKH--SSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 315 ---~~l~~--~~~~v~~~Pt~~~~~~g--~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
..++. +.|++.++|+++++... ....+....|..++++|.+.|.+
T Consensus 114 ~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~ 165 (178)
T 2ec4_A 114 HFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMA 165 (178)
T ss_dssp HTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHH
Confidence 12330 23899999999999432 22233333347899999888764
No 274
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=98.17 E-value=4.4e-06 Score=74.37 Aligned_cols=151 Identities=12% Similarity=0.113 Sum_probs=86.6
Q ss_pred HhHhC-CcEEEEecchHHHHHH-HHHHHc-----------CCCceEEEccCCCCcHHHHHHHHHHHHHhCC-cEEEEcCC
Q 018045 5 LEKFG-NDIAIAFSGAEDVALI-EYAHLT-----------GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPD 70 (361)
Q Consensus 5 ~~~~~-~~i~vs~SGGKDS~~l-~l~~~~-----------~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~-~i~~~~p~ 70 (361)
+++.+ ++++|++|||.||+++ .|+.+. +.++..++++.+. .+..+.++++++.+|+ +.+++.-
T Consensus 35 l~~~g~~~vvvglSGGvDSal~a~l~~~A~~~Lg~~~~~~~~~v~av~~p~~~--~~~~~~A~~~a~~lgi~~~~~i~i- 111 (279)
T 3q4g_A 35 LTEARYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGE--QKDEDEAQLALSFIRPTHSVSVNI- 111 (279)
T ss_dssp HHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEECCSSS--CSCHHHHHHHHHHHCCSEEEECCC-
T ss_pred HHHcCCCCEEEEccCCHHHHHHHHHHHHHHHHhCcccccCCceEEEEEecCCC--hHHHHHHHHHHHHhCCCeEEEEEC-
Confidence 34444 6899999999999877 664442 3457778888664 3347889999999999 6666532
Q ss_pred hHHHHHH-------HHhcCCC--CCCccchhchh--hccccHHHHHHHccCCEEEEee-eccCCccCccCCCceecCCCC
Q 018045 71 AVEVQAL-------VRSKGLF--SFYEDGHQECC--RVRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVVQVDPVF 138 (361)
Q Consensus 71 ~~~~~~~-------~~~~~~~--~~~~~~~~~cc--~~~K~~pl~~~~~~~~~~i~G~-R~~Es~~~R~~~~~~~~~~~~ 138 (361)
...+..+ ....+.. .....+...|. ...++..+..+.......+.|. +++|.. ... -.+|
T Consensus 112 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~NiqaR~R~~~Ly~~A~~~g~lVlgTgn~sE~~---~Gy-----~Tky 183 (279)
T 3q4g_A 112 KAGVDGLHAASHHALANTGLIPSDPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDHSAENI---TGF-----YTKF 183 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCCCHHHHH---HTC-----SCTT
T ss_pred HHHHHHHHHHHHHHhhhhcccccCCCcccchhhhHHHHHHHHHHHHHHHHCCCEEecCccHHhhh---ccc-----hhhc
Confidence 2222222 1112211 00111222232 4444544544444444555554 444431 111 1112
Q ss_pred cCCcCCCCCeEEEeeCccCcHHHHHHHHHhCCCC
Q 018045 139 EGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 172 (361)
Q Consensus 139 ~~~~~~~~~~~~~~Pi~~W~~~dv~~yi~~~~lp 172 (361)
+. +---++||.+.+..+|++..+..|+|
T Consensus 184 GD------~~~di~Pl~dl~Kt~Vr~LA~~lgiP 211 (279)
T 3q4g_A 184 GD------GACDLAPLFGLNKRQVRLLAKTLGAP 211 (279)
T ss_dssp TT------TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred CC------cccceeecCCCcHHHHHHHHHHhCCc
Confidence 10 12248999999999999999999875
No 275
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.17 E-value=2.3e-05 Score=62.97 Aligned_cols=106 Identities=8% Similarity=0.113 Sum_probs=78.6
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEE-EECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc--CCCchHHHHHcCCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVV-LYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA--DGDQKEYAKQKLQLG 325 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~-F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~--~~~~~~l~~~~~~v~ 325 (361)
+-|.++|.+++..+.. ..-++.++ |....-..-..+.+.+.++|+.+++ .+.|+.||. +.+ ..+. +.|++.
T Consensus 14 PLV~e~t~en~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~-~~~l-~~fGl~ 87 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFG---GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDN-QRIL-EFFGLK 87 (147)
T ss_dssp -CEEECCTTTHHHHHS---SSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGG-HHHH-HHTTCC
T ss_pred CeeEEeccccHHHHhc---CCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhH-HHHH-HHcCCC
Confidence 4588999999988875 55555544 4433334466788999999999998 899999999 555 5677 899998
Q ss_pred C--CCeEEEEeC-CCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 326 S--FPTILFFPK-HSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~--~Pt~~~~~~-g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
. +|+++++.. +...-..+..+..+.+.|.+|++++
T Consensus 88 ~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 88 KEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF 125 (147)
T ss_dssp GGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHH
Confidence 6 999999975 3321233333478999999999875
No 276
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.15 E-value=7.3e-06 Score=71.31 Aligned_cols=91 Identities=14% Similarity=0.212 Sum_probs=66.7
Q ss_pred CCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------------hHHHH
Q 018045 269 QEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------------KEYAK 319 (361)
Q Consensus 269 ~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----------------------------~~l~~ 319 (361)
++.+||+|| ++||+.|....+.+.++.++++..++.++.|.+|... ..++
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va- 107 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA- 107 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH-
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH-
Confidence 348889998 9999999999999999999997667999988876420 2455
Q ss_pred HcCCCC------------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 320 QKLQLG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~------------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+.|++. .+|++++++..+.....+.+ ..++.+++...|+.+
T Consensus 108 ~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 108 VKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 567764 47999999654433222211 136889999988876
No 277
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.13 E-value=9.2e-07 Score=75.00 Aligned_cols=45 Identities=22% Similarity=0.449 Sum_probs=41.1
Q ss_pred CCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~~ 313 (361)
+.+++||.||+.||++|+.+.|.+ +++++.+++ ++.|.+++++.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccCcC
Confidence 357899999999999999999999 999999987 899999999875
No 278
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.12 E-value=6.1e-06 Score=69.54 Aligned_cols=42 Identities=10% Similarity=0.267 Sum_probs=36.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 310 (361)
..+++|+.|+.+|||+|..+.|.+.++.+.+++ ++.|..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467889999999999999999999999999876 677776664
No 279
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.12 E-value=4.8e-06 Score=61.23 Aligned_cols=74 Identities=15% Similarity=0.318 Sum_probs=53.7
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH---Hc-CCCCCCCeEEEEeCCCCCeeecCCCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QK-LQLGSFPTILFFPKHSSKPIKYPSER 347 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~---~~-~~v~~~Pt~~~~~~g~~~~~~~~~~~ 347 (361)
-++.|.++|||+|++.+..|++. ++.|..+|++.+ ++... +. .+.+++|++++ .+|. ... .
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-------gi~y~~idi~~d-~~~~~~~~~~~~G~~tVP~I~i-~Dg~--~l~----~ 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-------RIAYDEVDIEHN-RAAAEFVGSVNGGNRTVPTVKF-ADGS--TLT----N 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHHSSSSSCSCEEEE-TTSC--EEE----S
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-------CCceEEEEcCCC-HHHHHHHHHHcCCCCEeCEEEE-eCCE--EEe----C
Confidence 47889999999999999887652 588999999987 55430 22 26789999754 5565 222 2
Q ss_pred CCHHHHHHHHHHh
Q 018045 348 RDVDSLMAFVDAL 360 (361)
Q Consensus 348 ~~~~~l~~~i~~~ 360 (361)
.+.++|.++|.++
T Consensus 70 ~~~~el~~~L~el 82 (92)
T 2lqo_A 70 PSADEVKAKLVKI 82 (92)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 5678898888765
No 280
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=98.12 E-value=6.2e-06 Score=73.52 Aligned_cols=143 Identities=10% Similarity=0.098 Sum_probs=80.0
Q ss_pred CcEEEEecchHHHHHH-HHHHHcC-----------CCceEEEccCCCCcHHHHHHHHHHHHHhCC-cEEEEcCCh--HHH
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTG-----------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDA--VEV 74 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~-----------~~i~v~~~dtg~~~pet~~~v~~~~~~~g~-~i~~~~p~~--~~~ 74 (361)
.+++|++|||-||+++ .|+.+.. .++..++++.+.. ...+.++++++.+|+ +++++.-.. ..+
T Consensus 41 ~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~~--~~~~dA~~va~~lgi~~~~~i~i~~~~~~~ 118 (275)
T 1wxi_A 41 KSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQ--ADEQDCQDAIAFIQPDRVLTVNIKGAVLAS 118 (275)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSC--TTHHHHHHHHHHHCCSEEEECCCHHHHHHH
T ss_pred CCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCCc--cCHHHHHHHHHHcCCCeEEEEecHHHHHHH
Confidence 4799999999999877 6665531 2677788887643 357889999999998 776653221 111
Q ss_pred HHHHHhcCCCCCCccchhchhh--ccccHHHHHHHccCC--EEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEE
Q 018045 75 QALVRSKGLFSFYEDGHQECCR--VRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVK 150 (361)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~cc~--~~K~~pl~~~~~~~~--~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 150 (361)
.......|.+ ..+...|.. ..+...+..+..... ++-||.. +|.. .... ..++ .+.--
T Consensus 119 ~~~l~~~g~~---~~~~~~~N~~aR~r~~~l~~~A~~~g~lvlgTgn~-~E~~---~Gy~-----t~~g------d~~~~ 180 (275)
T 1wxi_A 119 EQALREAGIE---LSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHA-AEAI---TGFF-----TKYG------DGGTD 180 (275)
T ss_dssp HHHHHHHTCC---CCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCH-HHHT---TTCS-----CTTT------TTCCS
T ss_pred HHHHHhcCCC---CCCchhhhhhhhHHHHHHHHHHHHCCCEEEECccH-HHHc---cCcc-----cccC------CCccc
Confidence 1112222321 112112221 222333333333333 3334433 3321 1111 0111 01123
Q ss_pred EeeCccCcHHHHHHHHHhCCCC
Q 018045 151 WNPVANVKGNDIWNFLRTMDVP 172 (361)
Q Consensus 151 ~~Pi~~W~~~dv~~yi~~~~lp 172 (361)
+.||.+++..||+...+..|+|
T Consensus 181 ~~PL~~l~K~eVr~la~~lglp 202 (275)
T 1wxi_A 181 INPLYRLNKRQGKQLLAALACP 202 (275)
T ss_dssp BCTTTTCCHHHHHHHHHHTTCC
T ss_pred eeeccCCCHHHHHHHHHHhCCc
Confidence 8999999999999999999986
No 281
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.11 E-value=6.1e-06 Score=61.64 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=45.7
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH---HcC-CCCCCCeEEEEeCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKL-QLGSFPTILFFPKHS 337 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~---~~~-~v~~~Pt~~~~~~g~ 337 (361)
++..-++.|+++||++|+.+++.|++. ++.|..+|++.+ ++... +.. +..++|++ |.+|+
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~i--fi~g~ 76 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCIDGD-NEAREAMAARANGKRSLPQI--FIDDQ 76 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEE--EETTE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEE--EECCE
Confidence 456678889999999999999999875 367788899887 54430 334 89999987 34665
No 282
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=4.2e-06 Score=65.90 Aligned_cols=66 Identities=11% Similarity=0.178 Sum_probs=46.5
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--ch----HHHHHcCCCCCCCeE
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPTI 330 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~~----~l~~~~~~v~~~Pt~ 330 (361)
+.+++++. .. .+ +.|+++||++|+.+.+.|+++. +.|..+|++.. .+ .+. +.+++.++|++
T Consensus 18 ~~~~~~i~---~~-~v-vvf~~~~Cp~C~~~~~~L~~~~-------i~~~~vdid~~~~~~~~~~~l~-~~~g~~~vP~l 84 (130)
T 2cq9_A 18 NQIQETIS---DN-CV-VIFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPRI 84 (130)
T ss_dssp HHHHHHHH---HS-SE-EEEECSSCSHHHHHHHHHHHHT-------CCCEEEETTTSTTHHHHHHHHH-HHHSSCCSSEE
T ss_pred HHHHHHHc---CC-cE-EEEEcCCChHHHHHHHHHHHcC-------CCcEEEECcCCcCcHHHHHHHH-HHhCCCCcCEE
Confidence 44566554 33 34 4499999999999999998762 45566777654 12 377 78899999998
Q ss_pred EEEeCCC
Q 018045 331 LFFPKHS 337 (361)
Q Consensus 331 ~~~~~g~ 337 (361)
+ .+|+
T Consensus 85 ~--i~G~ 89 (130)
T 2cq9_A 85 F--VNGT 89 (130)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 4 3665
No 283
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.09 E-value=6.4e-06 Score=62.19 Aligned_cols=65 Identities=15% Similarity=0.269 Sum_probs=47.1
Q ss_pred ccHHHHHhhcCCCCcEEEEEEC-----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH----HHHHcCCCCCC
Q 018045 257 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGSF 327 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~v~~~ 327 (361)
+.++++++ .+ .++| |++ +||++|+.+.+.|.++ ++.|..+|++.+ +. +. ..+++.++
T Consensus 8 ~~~~~~i~---~~-~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~-~~~~~~l~-~~~g~~~v 73 (105)
T 2yan_A 8 ERLKVLTN---KA-SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLK-AYSNWPTY 73 (105)
T ss_dssp HHHHHHHT---SS-SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGGC-HHHHHHHH-HHHTCCSS
T ss_pred HHHHHHhc---cC-CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHH-HHHCCCCC
Confidence 34555553 33 4444 777 9999999999999876 377888999887 55 44 55789999
Q ss_pred CeEEEEeCCC
Q 018045 328 PTILFFPKHS 337 (361)
Q Consensus 328 Pt~~~~~~g~ 337 (361)
|+++ .+|+
T Consensus 74 P~v~--i~g~ 81 (105)
T 2yan_A 74 PQLY--VKGE 81 (105)
T ss_dssp CEEE--ETTE
T ss_pred CeEE--ECCE
Confidence 9983 4665
No 284
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.09 E-value=2.1e-05 Score=73.28 Aligned_cols=110 Identities=11% Similarity=0.064 Sum_probs=84.6
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCC-CeEEEEEEcCCCchHHH---HHcCCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYA---KQKLQL 324 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~-~v~~~~vd~~~~~~~l~---~~~~~v 324 (361)
+.|.+++.+++.++.. ....++.++.|+.++|+.|..+.+.++++|+.+++. .+.|+.||++.. .... .+.|++
T Consensus 228 p~v~elt~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~-~~~l~~~~~~fgl 305 (367)
T 3us3_A 228 STLRKLKPESMYETWE-DDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF-PLLVPYWEKTFDI 305 (367)
T ss_dssp CSEEECCGGGHHHHHH-SCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC-TTTHHHHHHHHTC
T ss_pred cceeecChhhHHHHHh-hccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc-hhHHHHHHHhcCC
Confidence 5689999999887764 112456778899999999999999999999999974 599999999987 5332 045788
Q ss_pred C-CCCeEEEEeCCCCC--eeecCC--CCCCHHHHHHHHHHh
Q 018045 325 G-SFPTILFFPKHSSK--PIKYPS--ERRDVDSLMAFVDAL 360 (361)
Q Consensus 325 ~-~~Pt~~~~~~g~~~--~~~~~~--~~~~~~~l~~~i~~~ 360 (361)
. .+|+++++...+.. ...+.+ +..+.++|.+|++++
T Consensus 306 ~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 306 DLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp CTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 7 89999999765431 222333 368999999999875
No 285
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.08 E-value=6.8e-06 Score=60.26 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=51.7
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----c----hHHHHHcCCCCCCCeEEEEeCCCCCeeec
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----Q----KEYAKQKLQLGSFPTILFFPKHSSKPIKY 343 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~----~----~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~ 343 (361)
-++.|+++||++|+.+.+.++++. +.+-.+|++.. . .++. +.+++.++|++++ +|+ . .
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g-------i~~~~~~v~~~~~~~~~~~~~~l~-~~~g~~~vP~l~~--~g~--~--i 78 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG-------VDFEVIWIDKLEGEERKKVIEKVH-SISGSYSVPVVVK--GDK--H--V 78 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCCHHHHHHHHHHHH-HHHSSSCSCEEEE--TTE--E--E
T ss_pred eEEEEECCCChHHHHHHHHHHHcC-------CCcEEEEeeeCCccchHHHHHHHH-HhcCCCCcCEEEE--CCE--E--E
Confidence 377899999999999999888762 44555666631 1 4555 6788999999987 554 2 2
Q ss_pred CCCCCCHHHHHHHHH
Q 018045 344 PSERRDVDSLMAFVD 358 (361)
Q Consensus 344 ~~~~~~~~~l~~~i~ 358 (361)
.| .+.++|.++|+
T Consensus 79 ~G--~~~~~l~~~l~ 91 (92)
T 3ic4_A 79 LG--YNEEKLKELIR 91 (92)
T ss_dssp ES--CCHHHHHHHHH
T ss_pred eC--CCHHHHHHHhc
Confidence 23 58899999886
No 286
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.08 E-value=2.7e-06 Score=65.82 Aligned_cols=69 Identities=14% Similarity=0.242 Sum_probs=49.0
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhh-HHHHHHHHHHhcCCCeEEEEEEcCCCc------hHHHHHcCCCCCCCe
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPT 329 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~-~p~~~~la~~~~~~~v~~~~vd~~~~~------~~l~~~~~~v~~~Pt 329 (361)
+.+++++. .. .++.|+++||++|+.+ ++.++++.. . .+.|..+|++.+. .++. +.+++.++|+
T Consensus 16 ~~~~~~i~---~~--~Vvvf~~~~Cp~C~~alk~~L~~~~~---~-~i~~~~vdid~~~~~~~~~~~l~-~~~g~~tvP~ 85 (118)
T 3c1r_A 16 KHVKDLIA---EN--EIFVASKTYCPYCHAALNTLFEKLKV---P-RSKVLVLQLNDMKEGADIQAALY-EINGQRTVPN 85 (118)
T ss_dssp HHHHHHHH---HS--SEEEEECSSCHHHHHHHHHHHTTSCC---C-GGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHc---cC--cEEEEEcCCCcCHHHHHHHHHHHcCC---C-CCCeEEEECccCCChHHHHHHHH-HHhCCCCcCE
Confidence 44555554 33 2666999999999999 887766531 1 3788888988761 2577 7889999998
Q ss_pred EEEEeCCC
Q 018045 330 ILFFPKHS 337 (361)
Q Consensus 330 ~~~~~~g~ 337 (361)
+ |.+|+
T Consensus 86 v--fi~g~ 91 (118)
T 3c1r_A 86 I--YINGK 91 (118)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 7 44666
No 287
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.07 E-value=6.1e-06 Score=71.22 Aligned_cols=89 Identities=12% Similarity=0.221 Sum_probs=64.5
Q ss_pred cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---------------------------hHHHHHcCC
Q 018045 271 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---------------------------KEYAKQKLQ 323 (361)
Q Consensus 271 ~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---------------------------~~l~~~~~~ 323 (361)
.+|+.|+++||+.|....+.+.++.++++..++.++.|.+|... ..++ +.|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va-~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELA-NKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHH-HHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHH-HHhC
Confidence 45555689999999999999999999998767999999886420 2455 5677
Q ss_pred CC------------CCCeEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 018045 324 LG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~------------~~Pt~~~~~~g~~~~~~~~~---~~~~~~~l~~~i~~~ 360 (361)
+. .+|++++++..+.....+.+ ..++.++|...|+++
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 63 37999999654432222211 136899999998876
No 288
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.07 E-value=3e-06 Score=61.82 Aligned_cols=55 Identities=22% Similarity=0.395 Sum_probs=44.1
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCchHHHHHcC-CCCCCCeEEEEeCCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKL-QLGSFPTILFFPKHS 337 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~-~v~~~Pt~~~~~~g~ 337 (361)
-++.|+++||++|+.+.+.+++. ++.|..+|++ .. .++. +.+ ++.++|++++ +|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv~~~~~-~~l~-~~~~~~~~vP~l~~--~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-------GVKYTDIDASTSLR-QEMV-QRANGRNTFPQIFI--GDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-------TCCEEEECSCHHHH-HHHH-HHHHSSCCSCEEEE--TTE
T ss_pred eEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCHHHH-HHHH-HHhCCCCCcCEEEE--CCE
Confidence 47789999999999999998875 3667788887 44 6777 788 9999999853 565
No 289
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.06 E-value=4.9e-06 Score=66.86 Aligned_cols=66 Identities=11% Similarity=0.178 Sum_probs=46.5
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--ch----HHHHHcCCCCCCCeE
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPTI 330 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~~----~l~~~~~~v~~~Pt~ 330 (361)
+.+++++. .. .+ +.|+++||++|+.+.+.|+++. +.|..+|++.. .+ .+. +.+++.++|++
T Consensus 40 ~~~~~~i~---~~-~V-vvf~~~~Cp~C~~~k~~L~~~~-------i~~~~vdId~~~~~~~~~~~L~-~~~g~~tvP~i 106 (146)
T 2ht9_A 40 NQIQETIS---DN-CV-VIFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPRI 106 (146)
T ss_dssp HHHHHHHH---HC-SE-EEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCTTHHHHHHHHH-HHHSCCCSCEE
T ss_pred HHHHHHhc---CC-CE-EEEECCCChhHHHHHHHHHHcC-------CCeEEEECccCcCCHHHHHHHH-HHhCCCCcCeE
Confidence 45666664 33 44 4499999999999999998762 44556666643 12 377 78999999998
Q ss_pred EEEeCCC
Q 018045 331 LFFPKHS 337 (361)
Q Consensus 331 ~~~~~g~ 337 (361)
+ .+|+
T Consensus 107 f--i~G~ 111 (146)
T 2ht9_A 107 F--VNGT 111 (146)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 4 3665
No 290
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.06 E-value=4e-06 Score=69.36 Aligned_cols=44 Identities=18% Similarity=0.242 Sum_probs=37.7
Q ss_pred CCcEEEEEECCCChhHHhh-HHHHHHHHHHhcCCCeE-EEEEEcCC
Q 018045 269 QEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVK-VGKFRADG 312 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~-~p~~~~la~~~~~~~v~-~~~vd~~~ 312 (361)
++.+|++||++||++|+.. .|.|.++.+++++.++. ++.|+.+.
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~ 89 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAIND 89 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSC
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 3577888999999999999 99999999999765688 88888764
No 291
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=98.03 E-value=5e-06 Score=74.05 Aligned_cols=152 Identities=14% Similarity=0.086 Sum_probs=82.5
Q ss_pred HhHhC-CcEEEEecchHHHHHH-HHHHHc-------CC--CceEEEccCCCCcHHHHHHHHHHHHHhC-CcEEEEcCC--
Q 018045 5 LEKFG-NDIAIAFSGAEDVALI-EYAHLT-------GR--PFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPD-- 70 (361)
Q Consensus 5 ~~~~~-~~i~vs~SGGKDS~~l-~l~~~~-------~~--~i~v~~~dtg~~~pet~~~v~~~~~~~g-~~i~~~~p~-- 70 (361)
++..+ ++++|++|||.||+++ .|+.+. +. .+..+.+..+ .+...+-++++++.+| ++.+++.-.
T Consensus 41 l~~~g~~~vvvglSGGiDSal~a~La~~A~daLG~~~~~~~viav~~p~~--~~~~~~dA~~~a~~lg~i~~~~i~i~~~ 118 (285)
T 3dpi_A 41 LRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG--AQHDEADARRALAFVRADETLTVDVKPA 118 (285)
T ss_dssp HHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSC--C---CHHHHHHHHHHCCSEEEECCCHHH
T ss_pred HHHcCCCcEEEEccCChhHHHHHHHHHHHHHHhcccCcccEEEEEEcCCC--CHHHHHHHHHHHHHcCCCcEEEEEChHH
Confidence 34444 6899999999999877 555442 22 3445555544 3456677889999998 677665322
Q ss_pred hHHHHHHHHhcCCCCCC--ccchhchh--hccccHHHHHHHccCCEEEEee-eccCCccCccCCCceecCCCCcCCcCCC
Q 018045 71 AVEVQALVRSKGLFSFY--EDGHQECC--RVRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVVQVDPVFEGLEGGV 145 (361)
Q Consensus 71 ~~~~~~~~~~~~~~~~~--~~~~~~cc--~~~K~~pl~~~~~~~~~~i~G~-R~~Es~~~R~~~~~~~~~~~~~~~~~~~ 145 (361)
...+.......|...-. ..+...|. ..+++..+..+.......+.|. +++|.. ......++
T Consensus 119 ~~~~~~~l~~~g~~~~~~~~~~~~~~NiqaR~Rm~~L~~~A~~~g~lVlgTgn~sE~~--------~Gy~T~~G------ 184 (285)
T 3dpi_A 119 ADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAESV--------MGFFTKFG------ 184 (285)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHH--------HHHHHCCC------
T ss_pred HHHHHHHHHhcCccccccCCCchhhhhHHHHHHHHHHHHHHHHCCCEEEeCccHHhhh--------CCcccccC------
Confidence 12222222222321100 01112232 4445555555555555555555 333321 01111111
Q ss_pred CCeEEEeeCccCcHHHHHHHHHhCCCC
Q 018045 146 GSLVKWNPVANVKGNDIWNFLRTMDVP 172 (361)
Q Consensus 146 ~~~~~~~Pi~~W~~~dv~~yi~~~~lp 172 (361)
.+.--++||.+.+..||++..+..|+|
T Consensus 185 D~~~~~~Pl~~l~K~eV~~la~~lg~p 211 (285)
T 3dpi_A 185 DGGADVLPLAGLTKRRVRALARMLGAD 211 (285)
T ss_dssp CCCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred CCceeEeeecCCcHHHHHHHHHHcCCC
Confidence 011248999999999999999998875
No 292
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.02 E-value=1.9e-05 Score=59.29 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=50.5
Q ss_pred CCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----hHHH---HHcCCCCCCCeEEEEeCCCCCee
Q 018045 269 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYA---KQKLQLGSFPTILFFPKHSSKPI 341 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~----~~l~---~~~~~v~~~Pt~~~~~~g~~~~~ 341 (361)
.+.-++.|+++||++|+.+++.+++. ++.+-.+|++..+ .++. .+.+++.++|++++ +|+. .
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~-~- 88 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDL-------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEK-A- 88 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHH-------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTE-E-
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHc-------CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCE-E-
Confidence 34457789999999999999999875 2455566766420 1222 03468999999876 3321 2
Q ss_pred ecCCCCCCHHHHHHHHH
Q 018045 342 KYPSERRDVDSLMAFVD 358 (361)
Q Consensus 342 ~~~~~~~~~~~l~~~i~ 358 (361)
.| ..+.++|.++|+
T Consensus 89 --ig-g~~~~~l~~~L~ 102 (103)
T 3nzn_A 89 --IV-GFKEKEIRESLG 102 (103)
T ss_dssp --EE-SCCHHHHHHHTT
T ss_pred --EE-cCCHHHHHHHhC
Confidence 23 377888888763
No 293
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.02 E-value=3.2e-05 Score=68.05 Aligned_cols=97 Identities=10% Similarity=0.235 Sum_probs=77.5
Q ss_pred CCceecC-cccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCC
Q 018045 249 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 327 (361)
Q Consensus 249 ~~v~~l~-~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~ 327 (361)
+.|.+|+ .+++++++. .++.++|-|+++| |....+.|.++|+.+.+ .+.|+.+ .+ .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~l~---~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~-~~~F~~~---~~-~~v~-~~~~~~~- 72 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFIS---DKDASIVGFFDDS---FSEAHSEFLKAASNLRD-NYRFAHT---NV-ESLV-NEYDDNG- 72 (252)
T ss_dssp CCEEECCSHHHHHHHHT---SSSCEEEEEESCT---TSHHHHHHHHHHHHTTT-TSCEEEE---CC-HHHH-HHHCSSS-
T ss_pred CCceeecCHHHHHHHhh---cCCeEEEEEECCC---CChHHHHHHHHHHhccc-CcEEEEE---Ch-HHHH-HHhCCCC-
Confidence 4577884 566777776 7788999999998 55678899999999977 7888877 34 6788 8999997
Q ss_pred CeEEEEeCCC------CCeeec-CCCCCCHHHHHHHHHH
Q 018045 328 PTILFFPKHS------SKPIKY-PSERRDVDSLMAFVDA 359 (361)
Q Consensus 328 Pt~~~~~~g~------~~~~~~-~~~~~~~~~l~~~i~~ 359 (361)
|++++|+.+. .....| .| ..+.++|.+||+.
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y~~g-~~~~~~l~~fi~~ 110 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAYTEQ-KMTSGKIKKFIQE 110 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEECCCS-SCCHHHHHHHHHH
T ss_pred CcEEEEcchhhcccccccccccCCC-CcCHHHHHHHHHh
Confidence 9999998641 236788 77 5899999999986
No 294
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=98.01 E-value=5.5e-06 Score=71.73 Aligned_cols=126 Identities=17% Similarity=0.236 Sum_probs=79.7
Q ss_pred cEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCc------HHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCC
Q 018045 11 DIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLN------PETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGL 83 (361)
Q Consensus 11 ~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~------pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~~~~~~ 83 (361)
++++++||||||++. +++.+.+.++..++...+... ..-.+.++.+++.+|+++.++.....
T Consensus 6 Kvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~----------- 74 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGE----------- 74 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------------
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCC-----------
Confidence 799999999999866 788888877766654433221 11145788899999999987743211
Q ss_pred CCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHHH
Q 018045 84 FSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGND 161 (361)
Q Consensus 84 ~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~d 161 (361)
.....+.+.++++ +.+.+++|--..+. +|......-.. -++..+.||.....++
T Consensus 75 ------------~~~e~e~l~~~l~~~~i~~vv~Gdi~s~y--qr~r~e~vc~~----------~gl~~~~PLW~~d~~~ 130 (237)
T 3rjz_A 75 ------------KEKEVEDLKRVLSGLKIQGIVAGALASKY--QRKRIEKVAKE----------LGLEVYTPAWGRDAKE 130 (237)
T ss_dssp ---------------CHHHHHHHHTTSCCSEEECC---CCS--HHHHHHHHHHH----------TTCEEECSSSSCCHHH
T ss_pred ------------chHHHHHHHHHHHhcCCcEEEECCcchHH--HHHHHHHHHHH----------cCCEEEccccCCCHHH
Confidence 0112345556665 56788888888775 44433221111 1466799999999999
Q ss_pred HHHHHHhCCC
Q 018045 162 IWNFLRTMDV 171 (361)
Q Consensus 162 v~~yi~~~~l 171 (361)
+..-+...|+
T Consensus 131 Ll~e~i~~G~ 140 (237)
T 3rjz_A 131 YMRELLNLGF 140 (237)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHCCC
Confidence 8887777665
No 295
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.98 E-value=1.1e-05 Score=64.94 Aligned_cols=80 Identities=19% Similarity=0.358 Sum_probs=59.6
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-----C-----------------------------
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----D----------------------------- 313 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~-----~----------------------------- 313 (361)
..+.+|+.|+.++|++|+++.+.++++ + ++.+..++.-- +
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 567899999999999999999998765 2 46655443210 0
Q ss_pred -----------chHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 314 -----------QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 314 -----------~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+..++ ++++|+++||+++ .+|+ . ..| ..+.+.|.++|++.
T Consensus 87 ~~~~~~~~v~~~~~la-~~~gI~gtPt~vi-~nG~--~--i~G-~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLG-EQFGFNGTPTLVF-PNGR--T--QSG-YSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHH-HHTTCCSSCEEEC-TTSC--E--EES-CCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHH-HHhCCCccCEEEE-ECCE--E--eeC-CCCHHHHHHHHHHH
Confidence 14677 7899999999998 6665 2 334 67889999999875
No 296
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.97 E-value=3.1e-05 Score=63.99 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=35.1
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHh--cCCCeEEEEEEc
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL--AGNGVKVGKFRA 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~--~~~~v~~~~vd~ 310 (361)
..+..|+.|+..+||+|+.+.|.+.++.+.+ .+ ++.+...+.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeC
Confidence 4667899999999999999999999998888 55 677776554
No 297
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=97.97 E-value=1.2e-05 Score=72.81 Aligned_cols=118 Identities=11% Similarity=0.042 Sum_probs=80.1
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHh-------CCcEEEEcCChHHHHHHHHhc
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-------GIRIEYMFPDAVEVQALVRSK 81 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~-------g~~i~~~~p~~~~~~~~~~~~ 81 (361)
++++|++|| .||+++ +|+.+.|.++..+|++++. ...+.++++++++ +++++++.+ +.+..
T Consensus 180 ~kvlvllSG-vDS~vaa~ll~~~G~~v~~v~~~~~~---~~~~~a~~~a~~l~~~~~~~~i~~~vv~~----~~~~~--- 248 (307)
T 1vbk_A 180 GRMIGILHD-ELSALAIFLMMKRGVEVIPVYIGKDD---KNLEKVRSLWNLLKRYSYGSKGFLVVAES----FDRVL--- 248 (307)
T ss_dssp CEEEEECSS-HHHHHHHHHHHHBTCEEEEEEESCSS---HHHHHHHHHHHHHHTTCTTSCCCCEEESS----HHHHH---
T ss_pred CcEEEEEeC-CcHHHHHHHHHhCCCeEEEEEEEECH---HHHHHHHHHHHHHhhhccCCCCcEEEeCC----CHHHH---
Confidence 589999999 999777 8889999999999999553 4567788888888 677776631 11111
Q ss_pred CCCCCCccchhchhhccccHHHHHHH--ccCCEEEEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcH
Q 018045 82 GLFSFYEDGHQECCRVRKVRPLRRAL--KGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKG 159 (361)
Q Consensus 82 ~~~~~~~~~~~~cc~~~K~~pl~~~~--~~~~~~i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~ 159 (361)
.+. .+.+.++||+...|-..++..+.. .+.. ....-++||..++.
T Consensus 249 -----------------------~~A~~~ga~~I~tG~~~~~~~~qt~~l~~--~~~~--------~~~~vl~PL~~~~K 295 (307)
T 1vbk_A 249 -----------------------KLIRDFGVKGVIKGLRPNDLNSEVSEITE--DFKM--------FPVPVYYPLIALPE 295 (307)
T ss_dssp -----------------------HHHHHHTCCEEECCCCGGGCCTTCHHHHH--HHHH--------CSSCEECHHHHSCH
T ss_pred -----------------------HHHHHcCCCEEEECcccchhccccHHHhh--hccC--------cCCeEEEccCCCCH
Confidence 111 277899999987653112111111 1100 01235889999999
Q ss_pred HHHHHHHHhCCC
Q 018045 160 NDIWNFLRTMDV 171 (361)
Q Consensus 160 ~dv~~yi~~~~l 171 (361)
+||.++.++.|+
T Consensus 296 ~eI~~~a~~iGl 307 (307)
T 1vbk_A 296 EYIKSVKERLGL 307 (307)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 999999988764
No 298
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.94 E-value=6.5e-05 Score=62.97 Aligned_cols=42 Identities=14% Similarity=0.235 Sum_probs=35.8
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 310 (361)
..+..|+.|+.++||+|..+.|.+.++.+.+.+ ++.|..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 356689999999999999999999999998876 687776654
No 299
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.94 E-value=1.6e-05 Score=64.86 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=54.4
Q ss_pred CCCcEEEEEE-CCCChhHH-hhHHHHHHHHHHhcCCCeE-EEEEEcCCC----------------------chHHHHHcC
Q 018045 268 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGVK-VGKFRADGD----------------------QKEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~-~~~p~~~~la~~~~~~~v~-~~~vd~~~~----------------------~~~l~~~~~ 322 (361)
.+++++|+|| ++||++|. ...|.|.++.+++++.++. ++.|..+.. +..++ +.|
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~ 112 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYT-HAL 112 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHH-HHc
Confidence 5789999999 89999999 8999999999999755688 888876532 13466 677
Q ss_pred CCC------C-----CCeEEEEeCCC
Q 018045 323 QLG------S-----FPTILFFPKHS 337 (361)
Q Consensus 323 ~v~------~-----~Pt~~~~~~g~ 337 (361)
++. + .|+.+++++|+
T Consensus 113 gv~~~~~~~g~~~~~~p~~~vid~G~ 138 (162)
T 1tp9_A 113 GLELDLQEKGLGTRSRRFALLVDDLK 138 (162)
T ss_dssp TCEEEETTTTSEEEECCEEEEEETTE
T ss_pred CcccccccCCCCccceeEEEEEECCE
Confidence 775 2 79988888555
No 300
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.94 E-value=4.4e-05 Score=67.06 Aligned_cols=98 Identities=8% Similarity=0.086 Sum_probs=78.1
Q ss_pred CCceecCc-ccHHHHHhhcCC-CCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCC
Q 018045 249 QNLVTLNR-TGMENLARLDHR-QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 326 (361)
Q Consensus 249 ~~v~~l~~-~~f~~~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~ 326 (361)
+.|.+|++ +++++++. . ++.++|-|++++| ....+.|.++|+.+.+ .+.|+.+. + .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~~~---~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~-~~~F~~t~---~-~~v~-~~~~v~~ 73 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLK---DGDDVVILGVFQGVG---DPGYLQYQDAANTLRE-DYKFHHTF---S-TEIA-KFLKVSL 73 (250)
T ss_dssp CSSEECCCHHHHHHHHH---HCSSCEEEEECSCTT---CHHHHHHHHHHHHHTT-TCCEEEEC---C-HHHH-HHHTCCS
T ss_pred CCceecCCHHHHHHHHh---cCCCeEEEEEEcCCC---chHHHHHHHHHHhhhc-CcEEEEEC---c-HHHH-HHcCCCC
Confidence 45777854 77888776 6 8899999999984 5788899999999977 78898753 4 6888 8899987
Q ss_pred CCeEEEEeCC------CCCeeecCC-CCCCHHHHHHHHHH
Q 018045 327 FPTILFFPKH------SSKPIKYPS-ERRDVDSLMAFVDA 359 (361)
Q Consensus 327 ~Pt~~~~~~g------~~~~~~~~~-~~~~~~~l~~~i~~ 359 (361)
|++++|+.+ ......|.| +..+.++|.+||+.
T Consensus 74 -p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~ 112 (250)
T 3ec3_A 74 -GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVK 112 (250)
T ss_dssp -SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred -CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHH
Confidence 999999853 122567775 47899999999975
No 301
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.90 E-value=2.2e-05 Score=55.97 Aligned_cols=69 Identities=19% Similarity=0.341 Sum_probs=49.0
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 349 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~ 349 (361)
++.|+++||++|+.+.+.+++. ++.|..+|++.+. .++. +.+++.++|+++ .+|+ .+ +|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~-~~~~~~~vP~l~--~~g~--~i---~g--- 64 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMI-KRSGRTTVPQIF--IDAQ--HI---GG--- 64 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHH-HHHSSCCSCEEE--ETTE--EE---ES---
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHH-HHhCCCCcCEEE--ECCE--EE---eC---
Confidence 6789999999999999988864 3667778887651 2355 678999999984 3665 22 21
Q ss_pred HHHHHHHHHH
Q 018045 350 VDSLMAFVDA 359 (361)
Q Consensus 350 ~~~l~~~i~~ 359 (361)
.++|.+++++
T Consensus 65 ~~~i~~~~~~ 74 (82)
T 1fov_A 65 YDDLYALDAR 74 (82)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 3567666653
No 302
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.88 E-value=5.2e-05 Score=70.98 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=81.5
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCC-hhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCC--
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWC-QFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG-- 325 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC-~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~-- 325 (361)
+.|.+++.+++.++.. .+.+++|.|+.++| ..++.+...+.+++..+++ .+.|+.+|++.. ..++ +.|++.
T Consensus 219 p~v~elt~~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~~~-~~~~-~~~gl~~~ 292 (382)
T 2r2j_A 219 PLVREITFENGEELTE---EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCDKF-RHPL-LHIQKTPA 292 (382)
T ss_dssp CSSEECCHHHHHHHHT---TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETTTT-HHHH-HHTTCCGG
T ss_pred CceEecChhhHHHHhc---CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchHHh-HHHH-HHcCCCcc
Confidence 5688999999988775 78899999999987 4466666777777767776 899999999998 8888 899997
Q ss_pred CCCeEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 018045 326 SFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ~~Pt~~~~~~g~~~~~~~~~--~~~~~~~l~~~i~~~ 360 (361)
.+|.++++..++ ...+.. +..+.+.|.+||+++
T Consensus 293 ~~P~i~i~~~~~--~y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 293 DCPVIAIDSFRH--MYVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp GCSEEEEECSSC--EEECCCSGGGGSTTHHHHHHHHH
T ss_pred CCCEEEEEcchh--cCCCCccccccCHHHHHHHHHHH
Confidence 689999987554 333332 134678999999875
No 303
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.88 E-value=1.9e-05 Score=57.80 Aligned_cols=55 Identities=18% Similarity=0.403 Sum_probs=42.5
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH----HHHHcCCCCCCCeEEEEeCCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
-++.|+++||++|+.+.+.+++. ++.|..+|++.+ +. +. +.+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~~~-~~~~~~l~-~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------GAEFNEIDASAT-PELRAEMQ-ERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEESTTS-HHHHHHHH-HHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 47889999999999999988764 377888898876 43 44 47889999975 44665
No 304
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.88 E-value=1.4e-05 Score=61.06 Aligned_cols=55 Identities=18% Similarity=0.384 Sum_probs=40.3
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---ch----HHHHHcCCCCCCCeEEEEeCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---QK----EYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---~~----~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
++.|+++||++|+.+++.|+++ ++.+..+|++.. .. .+. +.+++.++|++ |.+|+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~~~~~l~-~~~g~~tvP~i--fi~g~ 82 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELDQLGPQGPQLQKVLE-RLTGQHTVPNV--FVCGK 82 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHHHH-HHHSCCSSCEE--EETTE
T ss_pred EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEeecCCCChHHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 6779999999999999999864 355666777652 12 244 45689999998 44665
No 305
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.87 E-value=5.9e-05 Score=62.55 Aligned_cols=41 Identities=22% Similarity=0.478 Sum_probs=34.9
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEE
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 309 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd 309 (361)
.++++||.|+.-.||+|+.+.|.+.++.+.+.+ ++.+..+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE-GAKFQKNH 60 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TCEEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC-ceEEEEEe
Confidence 467899999999999999999999999999876 56666553
No 306
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.82 E-value=7.1e-05 Score=54.07 Aligned_cols=74 Identities=12% Similarity=0.128 Sum_probs=49.0
Q ss_pred cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHcCCC-----CCCCeEEEEeCCCCCeee
Q 018045 271 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQL-----GSFPTILFFPKHSSKPIK 342 (361)
Q Consensus 271 ~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~v-----~~~Pt~~~~~~g~~~~~~ 342 (361)
..++.|+++||++|+.++..+++.. - .+.+..||.+.+. .++. +.++. .++|++++ +|+ .+.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i-~~~~~~vd~~~~~~~~~el~-~~~g~~~~~~~~vP~i~i--~g~--~i~ 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----I-AFDETIIDDYAQRSKFYDEM-NQSGKVIFPISTVPQIFI--DDE--HIG 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----C-CCEEEECCSHHHHHHHHHHH-HTTTCCSSCCCSSCEEEE--TTE--EEE
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----C-CceEEEeecCCChhHHHHHH-HHhCCCCCCCCccCEEEE--CCE--EEe
Confidence 3488899999999999998886642 1 3455555554331 3466 67777 99999865 565 222
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 018045 343 YPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 343 ~~~~~~~~~~l~~~i~~~ 360 (361)
| .+++.++++++
T Consensus 74 --g----~~~i~~~~~~~ 85 (89)
T 3msz_A 74 --G----FTELKANADKI 85 (89)
T ss_dssp --S----HHHHHHTHHHH
T ss_pred --C----hHHHHHHHHHH
Confidence 2 46777766653
No 307
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.74 E-value=0.00019 Score=61.17 Aligned_cols=93 Identities=13% Similarity=0.191 Sum_probs=69.2
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------chHHHH
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~---------------------------~~~l~~ 319 (361)
.+|.+|++|| ++||+.|....+.|++..++|+..++.++.|.+|.. +.+++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~va- 129 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLS- 129 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHH-
Confidence 5788999999 999999999999999999999876899999987642 14577
Q ss_pred HcCCCC------CCCeEEEEeCCCCC-eee-cC-CCCCCHHHHHHHHHHhC
Q 018045 320 QKLQLG------SFPTILFFPKHSSK-PIK-YP-SERRDVDSLMAFVDALR 361 (361)
Q Consensus 320 ~~~~v~------~~Pt~~~~~~g~~~-~~~-~~-~~~~~~~~l~~~i~~~~ 361 (361)
+.|+|- .++.+++++..+.+ .+. +. .-.++.+++...|+.++
T Consensus 130 k~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~AlQ 180 (216)
T 3sbc_A 130 RDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQ 180 (216)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHhh
Confidence 788873 35777777554432 111 11 12479999999888763
No 308
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.62 E-value=0.00012 Score=55.50 Aligned_cols=65 Identities=15% Similarity=0.352 Sum_probs=47.3
Q ss_pred ccHHHHHhhcCCCCcEEEEEEC-----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH----HHHHcCCCCCC
Q 018045 257 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGSF 327 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~v~~~ 327 (361)
+.+++++. +++ ++.|+. +||++|+.+++.|++. ++.|..+|++.+ ++ +. +..+..++
T Consensus 6 ~~~~~~i~---~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~-~~~~~~l~-~~~g~~~v 71 (109)
T 1wik_A 6 SGLKVLTN---KAS--VMLFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLK-TFSNWPTY 71 (109)
T ss_dssp CCHHHHHT---TSS--EEEEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSSC-HHHHHHHH-HHHSCCSS
T ss_pred HHHHHHhc---cCC--EEEEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCCC-HHHHHHHH-HHhCCCCC
Confidence 45677664 343 445777 9999999999998764 478999999987 54 34 45678899
Q ss_pred CeEEEEeCCC
Q 018045 328 PTILFFPKHS 337 (361)
Q Consensus 328 Pt~~~~~~g~ 337 (361)
|++ |.+|+
T Consensus 72 P~i--fi~g~ 79 (109)
T 1wik_A 72 PQL--YVRGD 79 (109)
T ss_dssp CEE--ECSSS
T ss_pred CEE--EECCE
Confidence 984 55666
No 309
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.59 E-value=5.5e-05 Score=59.30 Aligned_cols=69 Identities=16% Similarity=0.295 Sum_probs=46.7
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhh-HHHHHHHHHHhcCCCeEEEEEEcCCCc------hHHHHHcCCCCCCCe
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPT 329 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~-~p~~~~la~~~~~~~v~~~~vd~~~~~------~~l~~~~~~v~~~Pt 329 (361)
+.+++++. ..+ ++.|+++||++|+.+ ++.++++... .+.+..+|++... .++. +.+++.++|+
T Consensus 28 ~~v~~~i~---~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~~~~~L~-~~~g~~tVP~ 97 (129)
T 3ctg_A 28 AHVKDLIG---QKE--VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSEIQDALE-EISGQKTVPN 97 (129)
T ss_dssp HHHHHHHH---HSS--EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHc---CCC--EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHHHHHHHH-HHhCCCCCCE
Confidence 44555554 333 778999999999999 8877765311 1556666666541 3566 7789999999
Q ss_pred EEEEeCCC
Q 018045 330 ILFFPKHS 337 (361)
Q Consensus 330 ~~~~~~g~ 337 (361)
+ |.+|+
T Consensus 98 v--fi~g~ 103 (129)
T 3ctg_A 98 V--YINGK 103 (129)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 6 44665
No 310
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.59 E-value=0.00018 Score=59.45 Aligned_cols=99 Identities=15% Similarity=0.241 Sum_probs=62.2
Q ss_pred cHHHHHhhcCCCCcEEEEEECCCChhHHh-hHHHHHHHHHHhcCCCe-EEEEEEcCCC----------------------
Q 018045 258 GMENLARLDHRQEPWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADGD---------------------- 313 (361)
Q Consensus 258 ~f~~~~~~~~~~~~vlv~F~a~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~vd~~~~---------------------- 313 (361)
++.++++ .++.||+.|+++||+.|.. ..|.|.+.+++++..++ .++.|.+|..
T Consensus 40 sLsd~~~---Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~ 116 (176)
T 4f82_A 40 SVRDQVA---GKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADG 116 (176)
T ss_dssp EHHHHHT---TCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECT
T ss_pred eHHHHhC---CCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcC
Confidence 3455443 3335566677999999999 99999999999976578 8888877542
Q ss_pred chHHHHHcCCCC-----------CCCeEEEEeCCCCCeeec-CCCCCCHHHHHHHHHHh
Q 018045 314 QKEYAKQKLQLG-----------SFPTILFFPKHSSKPIKY-PSERRDVDSLMAFVDAL 360 (361)
Q Consensus 314 ~~~l~~~~~~v~-----------~~Pt~~~~~~g~~~~~~~-~~~~~~~~~l~~~i~~~ 360 (361)
+.+++ +.|++. ..|+.+++++|+...... ..+..+..+..+.|++|
T Consensus 117 ~~~va-~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~~~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 117 SAAFT-HALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEAPGKFEVSDAASVLATL 174 (176)
T ss_dssp TCHHH-HHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECCTTCCSSSSHHHHHHTC
T ss_pred chHHH-HHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcCCCCcchhhHHHHHHHh
Confidence 13566 677663 247666667776432222 12233444445555444
No 311
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.58 E-value=8e-05 Score=56.97 Aligned_cols=66 Identities=15% Similarity=0.324 Sum_probs=45.7
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--c----hHHHHHcCCCCCCCeE
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--Q----KEYAKQKLQLGSFPTI 330 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~----~~l~~~~~~v~~~Pt~ 330 (361)
+.++++++ +++ ++.|+++|||+|+.+++.|+++ ++.|..+|++.. . ..+. +..+..++|++
T Consensus 8 ~~~~~~i~---~~~--v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~~~~l~-~~~g~~tvP~v 74 (114)
T 3h8q_A 8 RHLVGLIE---RSR--VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARVQEVLS-EITNQKTVPNI 74 (114)
T ss_dssp HHHHHHHH---HCS--EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHhc---cCC--EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHHHHHHH-HHhCCCccCEE
Confidence 44566554 333 4459999999999999998874 356777777752 1 2244 56688999998
Q ss_pred EEEeCCC
Q 018045 331 LFFPKHS 337 (361)
Q Consensus 331 ~~~~~g~ 337 (361)
++ +|+
T Consensus 75 fi--~g~ 79 (114)
T 3h8q_A 75 FV--NKV 79 (114)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 66 555
No 312
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.55 E-value=9e-05 Score=62.36 Aligned_cols=43 Identities=9% Similarity=0.205 Sum_probs=39.0
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 311 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~ 311 (361)
+.+++||.|++.||++|+.+.|.+.++.+.+.+ ++.|..+.+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 568899999999999999999999999999887 7999888864
No 313
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.51 E-value=0.00065 Score=59.55 Aligned_cols=103 Identities=10% Similarity=0.097 Sum_probs=76.2
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECCCCh---h-HHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCchHHHHHcC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ---F-CQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKL 322 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~---~-C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~ 322 (361)
+.|.++|.+++..+. +.+++|.|+..-+. . ...+...+.++|+.+++ ..+.|+.+|.+.. ..+. +.|
T Consensus 114 Plv~e~t~~n~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~-~~~~-~~f 186 (252)
T 2h8l_A 114 GICPHMTEDNKDLIQ-----GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF-SHEL-SDF 186 (252)
T ss_dssp CSSCEECTTTHHHHS-----SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT-HHHH-GGG
T ss_pred CCeeecccccHhhhc-----CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHH-HHHH-HHc
Confidence 468899999998852 34667777754332 1 22477889999999986 1399999999988 7788 899
Q ss_pred CC----CCCCeEEEEeCCCCCeeecCCCCCCHHH--HHHHHHHh
Q 018045 323 QL----GSFPTILFFPKHSSKPIKYPSERRDVDS--LMAFVDAL 360 (361)
Q Consensus 323 ~v----~~~Pt~~~~~~g~~~~~~~~~~~~~~~~--l~~~i~~~ 360 (361)
++ ..+|.++++...+. ...+.+ ..+.+. |.+|++++
T Consensus 187 gl~~~~~~~P~v~i~~~~~~-ky~~~~-~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 187 GLESTAGEIPVVAIRTAKGE-KFVMQE-EFSRDGKALERFLQDY 228 (252)
T ss_dssp TCCCCSCSSCEEEEECTTSC-EEECCS-CCCTTSHHHHHHHHHH
T ss_pred CCCCccCCCCEEEEEeCcCc-EecCCc-ccCcchHHHHHHHHHH
Confidence 99 36999999964332 444554 677788 99999875
No 314
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.51 E-value=0.00033 Score=60.12 Aligned_cols=87 Identities=10% Similarity=0.112 Sum_probs=61.2
Q ss_pred CCCcEEEEEECCC-ChhHH-----hhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------chHHHH
Q 018045 268 RQEPWLVVLYAPW-CQFCQ-----AMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAK 319 (361)
Q Consensus 268 ~~~~vlv~F~a~w-C~~C~-----~~~p~~~~la~~~~~~~v~~~~vd~~~~----------------------~~~l~~ 319 (361)
.++++||+||+.| |++|. ...+.|.++ +. ++.++.|..|.. +..++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~va- 120 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFH- 120 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHH-
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHH-
Confidence 4789999999988 99999 777777776 53 588888876532 14677
Q ss_pred HcCCCCC---------CCeEEEEe-CCCCCeeecC---CCCCCHHHHHHHHHHh
Q 018045 320 QKLQLGS---------FPTILFFP-KHSSKPIKYP---SERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~~---------~Pt~~~~~-~g~~~~~~~~---~~~~~~~~l~~~i~~~ 360 (361)
+.|+|.. .|++++++ +|+....... .+..+.+++.+.|+++
T Consensus 121 k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 121 KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHh
Confidence 7888864 79999996 5542211111 1246788888888765
No 315
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.47 E-value=0.00021 Score=59.99 Aligned_cols=42 Identities=24% Similarity=0.534 Sum_probs=35.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEc
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRA 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~ 310 (361)
..++.||.|+..+||+|+.+.|.+ .++.+.+.+ ++.|..++.
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 357899999999999999999987 689999876 577776664
No 316
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=97.42 E-value=0.0002 Score=71.79 Aligned_cols=64 Identities=17% Similarity=0.160 Sum_probs=43.4
Q ss_pred HhHhC-CcEEEEecchHHHHHH-HHHHH----cC---CCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEc
Q 018045 5 LEKFG-NDIAIAFSGAEDVALI-EYAHL----TG---RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMF 68 (361)
Q Consensus 5 ~~~~~-~~i~vs~SGGKDS~~l-~l~~~----~~---~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~ 68 (361)
+++.+ ++++|++|||.||+++ .|+.+ ++ .++..++++.....+++++.++++++.+|++++++.
T Consensus 356 l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~lg~~~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~ 428 (680)
T 3sdb_A 356 LRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEID 428 (680)
T ss_dssp HHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC--------CHHHHHHHHHTCEEEECC
T ss_pred HHHcCCCcEEEEecCCccHHHHHHHHHHHHHHhCCCCceEEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 44445 6899999999999865 44433 33 467889999877778899999999999999987763
No 317
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=97.41 E-value=0.00031 Score=70.00 Aligned_cols=151 Identities=15% Similarity=0.080 Sum_probs=85.8
Q ss_pred hHhC-CcEEEEecchHHHHHH-HH--------HHHcCCC---------------------------------ceEEEccC
Q 018045 6 EKFG-NDIAIAFSGAEDVALI-EY--------AHLTGRP---------------------------------FRVFSLDT 42 (361)
Q Consensus 6 ~~~~-~~i~vs~SGGKDS~~l-~l--------~~~~~~~---------------------------------i~v~~~dt 42 (361)
++.+ ++++|++|||-||+++ .| +...+.+ +..+|+.+
T Consensus 299 ~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~alG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~m~~ 378 (634)
T 3ilv_A 299 RKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQST 378 (634)
T ss_dssp HHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHHHHHHEEEEEEEC
T ss_pred HHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHhCchhhhhhhhcccccccccccccccccchhHhhhheeeeeecCC
Confidence 3434 6899999999999865 44 1334544 55778777
Q ss_pred CCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHH----HhcCCCCCCc-cc--hhchhhccccHHHHHHHc--cCCEE
Q 018045 43 GRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALV----RSKGLFSFYE-DG--HQECCRVRKVRPLRRALK--GLRAW 113 (361)
Q Consensus 43 g~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~~~----~~~~~~~~~~-~~--~~~cc~~~K~~pl~~~~~--~~~~~ 113 (361)
...-+++++-++++++.+|+++.++.-.. .+..+. ...|...-+. .+ ...++...+...+..... +..++
T Consensus 379 ~~ss~~~~~dA~~la~~LGi~~~~IdI~~-~~~~~~~~~~~~~g~~p~~~~~~~~~~N~qaR~R~~~l~~~A~~~g~lvl 457 (634)
T 3ilv_A 379 RNSGDETYTSAKTLAESIGATFYNWSVDE-EIEQYKATIENVIERPLTWEKDDITLQNIQARGRAPIIWMLTNVKQALLI 457 (634)
T ss_dssp TTCCSHHHHHHHHHHHHHTCEEEEEECHH-HHHHHHHHHHHHTTSCCCTTTCHHHHHHHHHHTTHHHHHHHHHHHTCEEB
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEccHH-HHHHHHHHHHHhhCCCcccccCcchhhhhhHHHHHHHHHHHHHhcCCEEe
Confidence 66678999999999999999988764332 222222 1122211111 11 122334444444444433 33333
Q ss_pred EEeeeccCCccCccCCCceecCCCCcCCcCCCCCeEEEeeCccCcHHHHHHHHHhC----CCC
Q 018045 114 ITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTM----DVP 172 (361)
Q Consensus 114 i~G~R~~Es~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~W~~~dv~~yi~~~----~lp 172 (361)
-||. .+|+. . .. ...|.. ..--++||.+.++.+|++..+.. +||
T Consensus 458 gTgn-ksE~~--~-Gy-----~T~ygD------~~~~~~Pl~~l~KteVr~la~~l~~~~glp 505 (634)
T 3ilv_A 458 TTSN-RSEGD--V-GY-----ATMDGD------TAGGIAPIAGVDKDFIRSWLRWAEKNRNQH 505 (634)
T ss_dssp CCCC-HHHHH--T-TC-----SCTTTT------TCSSBBTTTTSCHHHHHHHHHHHHHHSCCG
T ss_pred ccCc-hhhHh--h-CC-----ccccCC------cccCCcccCCCcHHHHHHHHHHHHHcCCCc
Confidence 3443 33331 1 11 111110 01137899999999999988877 665
No 318
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.37 E-value=0.0013 Score=56.19 Aligned_cols=105 Identities=10% Similarity=0.197 Sum_probs=74.2
Q ss_pred CCCceecCcccHHHHHhhcCCCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC-------------
Q 018045 248 SQNLVTLNRTGMENLARLDHRQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------- 313 (361)
Q Consensus 248 ~~~v~~l~~~~f~~~~~~~~~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~------------- 313 (361)
+....+++-.+| .++.+||+|| ++||+.|......|.+..++|+..++.++.|.+|..
T Consensus 43 d~~g~~vsLsd~--------~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~ 114 (219)
T 3tue_A 43 NGSFKKISLSSY--------KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKK 114 (219)
T ss_dssp TSCEEEEEGGGG--------TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGG
T ss_pred CCCCcEEehHHh--------CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHh
Confidence 344555555555 5788999999 999999999999999999999887899999988652
Q ss_pred --------------chHHHHHcCCCC----CC--CeEEEEeC-CCCCeee-cC-CCCCCHHHHHHHHHHhC
Q 018045 314 --------------QKEYAKQKLQLG----SF--PTILFFPK-HSSKPIK-YP-SERRDVDSLMAFVDALR 361 (361)
Q Consensus 314 --------------~~~l~~~~~~v~----~~--Pt~~~~~~-g~~~~~~-~~-~~~~~~~~l~~~i~~~~ 361 (361)
+.+++ +.|+|- ++ -.+++++. |....+. +. .-.++.+++...|+.++
T Consensus 115 ~~~~~l~fpllsD~~~~va-~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ 184 (219)
T 3tue_A 115 GGLGTMAIPILADKTKNIA-RSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQ 184 (219)
T ss_dssp TCCCSCSSCEEECTTSHHH-HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cCccccccccccCcccHHH-HHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhh
Confidence 14577 788873 33 35566644 4322222 21 22478999999888763
No 319
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.32 E-value=0.0028 Score=55.39 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=76.5
Q ss_pred CCceecCcccHHHHHhhcCCCCcEEEEEECC-CC---h-hHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCC
Q 018045 249 QNLVTLNRTGMENLARLDHRQEPWLVVLYAP-WC---Q-FCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQ 323 (361)
Q Consensus 249 ~~v~~l~~~~f~~~~~~~~~~~~vlv~F~a~-wC---~-~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~ 323 (361)
+-|.++|.+|+..+. .++++++.|+.. .. . ....+...+.++|+.++ .+.|+.+|.+.. .... +.|+
T Consensus 116 Plv~e~t~~n~~~~~----~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~~~~-~~~l-~~fg 187 (250)
T 3ec3_A 116 PLVGHRKTSNDAKRY----SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADEEDY-ATEV-KDLG 187 (250)
T ss_dssp CTEEEECTTTHHHHS----CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEETTTT-HHHH-HHTT
T ss_pred CceeecCccchhhhh----ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcHHHH-HHHH-HHcC
Confidence 458899999988755 367777777753 32 3 34557889999999998 599999999988 7778 7899
Q ss_pred CCC--C-CeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 324 LGS--F-PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 324 v~~--~-Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
+.. . |.++++.... ....+..+..+.+.|.+|++++
T Consensus 188 l~~~~~~p~~~~~~~~~-~ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 188 LSESGGDVNAAILDESG-KKFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp CSSCSCSCEEEEECTTS-CEEECCCCSCCHHHHHHHHHHH
T ss_pred CCccCCCcEEEEEcCCC-ceecCCcccCCHHHHHHHHHHH
Confidence 864 4 4777775433 2445553468999999999875
No 320
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.30 E-value=0.00011 Score=61.56 Aligned_cols=43 Identities=19% Similarity=0.411 Sum_probs=36.8
Q ss_pred CCcEEEEEECCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCC
Q 018045 269 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADG 312 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~vd~~~ 312 (361)
.++++|.|++.|||+|+.+.|.+ .++.+.+.+ ++.|..+++.-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEechh
Confidence 57899999999999999999987 688888876 78888888753
No 321
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.01 E-value=0.0011 Score=51.52 Aligned_cols=69 Identities=9% Similarity=0.073 Sum_probs=44.1
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--c----hHHHHHcCCCCCCCeE
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--Q----KEYAKQKLQLGSFPTI 330 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~----~~l~~~~~~v~~~Pt~ 330 (361)
++|+++++ ..+ ++.|..+|||+|+.++..|.+. ..- ++.|..+|++.. . ..+. +..+..++|++
T Consensus 5 ~~~~~ii~---~~~--Vvvysk~~Cp~C~~ak~lL~~~---~~~-~v~~~~idid~~~d~~~~~~~l~-~~~G~~tVP~I 74 (127)
T 3l4n_A 5 KEYSLILD---LSP--IIIFSKSTCSYSKGMKELLENE---YQF-IPNYYIIELDKHGHGEELQEYIK-LVTGRGTVPNL 74 (127)
T ss_dssp HHHHHHHT---SCS--EEEEECTTCHHHHHHHHHHHHH---EEE-ESCCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHHc---cCC--EEEEEcCCCccHHHHHHHHHHh---ccc-CCCcEEEEecCCCCHHHHHHHHH-HHcCCCCcceE
Confidence 45777765 443 8889999999999999888874 110 234455555532 1 1233 34578899998
Q ss_pred EEEeCCC
Q 018045 331 LFFPKHS 337 (361)
Q Consensus 331 ~~~~~g~ 337 (361)
++ +|+
T Consensus 75 fI--~G~ 79 (127)
T 3l4n_A 75 LV--NGV 79 (127)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 54 554
No 322
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.006 Score=54.79 Aligned_cols=101 Identities=11% Similarity=0.162 Sum_probs=71.5
Q ss_pred CCceec-CcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH-HcCC---
Q 018045 249 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK-QKLQ--- 323 (361)
Q Consensus 249 ~~v~~l-~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~-~~~~--- 323 (361)
..+..+ +.+++++++. ..++++++.|... ....+.|.++|..+.+ .+.|+.++-.+. ..+.. ++|+
T Consensus 143 ~~v~~i~~~~~l~~~l~--~~~~~~vi~fs~~-----~~~~~~f~~~A~~~~~-~~~F~~v~~~~~-a~~~~~~~~~~~~ 213 (298)
T 3ed3_A 143 SYVKKFVRIDTLGSLLR--KSPKLSVVLFSKQ-----DKISPVYKSIALDWLG-KFDFYSISNKKL-KQLTDMNPTYEKT 213 (298)
T ss_dssp CCEEECSCGGGHHHHHT--SCSSEEEEEEESS-----SSCCHHHHHHHHHTBT-TEEEEEEEGGGC-CCCCTTCTTSTTC
T ss_pred cccEEcCCHHHHHHHHh--cCCceEEEEEcCC-----CcchHHHHHHHHHhhc-CcEEEEEcchHh-hhhhhhhhhcccC
Confidence 456777 4477888876 2256677766432 2456899999999988 899999986543 11100 0111
Q ss_pred --C-------------CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 018045 324 --L-------------GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 358 (361)
Q Consensus 324 --v-------------~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~ 358 (361)
| ...|++++|+.....+..|.|+..+.++|.+||.
T Consensus 214 p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~ 263 (298)
T 3ed3_A 214 PEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLR 263 (298)
T ss_dssp HHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHH
T ss_pred cchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHH
Confidence 2 6799999998765568999976799999999997
No 323
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.87 E-value=0.0007 Score=56.41 Aligned_cols=39 Identities=21% Similarity=0.403 Sum_probs=33.9
Q ss_pred CCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 018045 269 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 310 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 310 (361)
++++||.|++.|||+|+.+.|.+.++.+.+ + +.|..+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEec
Confidence 688999999999999999999999999998 4 56666654
No 324
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.85 E-value=0.0066 Score=51.20 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=33.7
Q ss_pred CCCcEEEEEECCCChhHHhhHHHH-HHHHHHhcC-CCeEEEEEEc
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFRA 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~vd~ 310 (361)
..+..|+.|+...||+|+.+.+.+ ..+.+.|.+ .+|.|...+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 467789999999999999999986 667777742 3688887664
No 325
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.82 E-value=0.0027 Score=57.75 Aligned_cols=88 Identities=6% Similarity=0.027 Sum_probs=60.4
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------chHHHHHcCCCC-
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLG- 325 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--------------------~~~l~~~~~~v~- 325 (361)
.+|.+||+|| +.||+.|....+.|.+. .+ .++.++.|+.|.. +..++ +.|+|.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~--~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~-~~ygv~~ 97 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSRE--NF--EKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILH-EFFNVLE 97 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHHS--CC--TTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHH-HHTTCEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHH--hh--CCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHH-HhcCCCC
Confidence 5789999999 68999999887777541 12 3688888887642 14677 789983
Q ss_pred ---CCCeEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 018045 326 ---SFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 360 (361)
Q Consensus 326 ---~~Pt~~~~~~g~~~~~~~~~--~~~~~~~l~~~i~~~ 360 (361)
.+|+.++++..+.+...+.+ -...++++.++|+++
T Consensus 98 ~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 98 NGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp TTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 57888888554433222222 134678888888875
No 326
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.71 E-value=0.0015 Score=51.32 Aligned_cols=67 Identities=12% Similarity=0.236 Sum_probs=43.8
Q ss_pred ccHHHHHhhcCCCCcEEEEEEC----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH---HcCCCCCCCe
Q 018045 257 TGMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPT 329 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~---~~~~v~~~Pt 329 (361)
+.+++++. ...|+|+.++ +||++|+.++..|.+. ++.|..+|++.+ +++.. +..+..++|.
T Consensus 26 ~~v~~~i~----~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~~d-~~~~~~L~~~~G~~tvP~ 93 (135)
T 2wci_A 26 EKIQRQIA----ENPILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDILQN-PDIRAELPKYANWPTFPQ 93 (135)
T ss_dssp HHHHHHHH----HCSEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGGGC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhc----cCCEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECCCC-HHHHHHHHHHHCCCCcCE
Confidence 33444443 3345554444 9999999999888654 477888899876 54330 3457788998
Q ss_pred EEEEeCCC
Q 018045 330 ILFFPKHS 337 (361)
Q Consensus 330 ~~~~~~g~ 337 (361)
++ -+|+
T Consensus 94 Vf--I~G~ 99 (135)
T 2wci_A 94 LW--VDGE 99 (135)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 64 4565
No 327
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.56 E-value=0.0051 Score=53.25 Aligned_cols=58 Identities=12% Similarity=0.245 Sum_probs=43.7
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--hHHHHHcCCCCCCCeEEEEeCCC
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~--~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
...++.|+.+||+.|+..+..|++. ++.+-.+|++.+. .++. +.++..++|++++ +|+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~~~~~~~~l~-~~~g~~~vP~~~~--~g~ 228 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILGHDATIVSVR-AVSGRTTVPQVFI--GGK 228 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETTTTCCHHHHH-HHTCCSSSCEEEE--TTE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECCCchHHHHHH-HHhCCCCcCEEEE--CCE
Confidence 4568889999999999999888764 3666677876651 3466 7889999999753 554
No 328
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.53 E-value=0.02 Score=49.20 Aligned_cols=42 Identities=7% Similarity=0.139 Sum_probs=32.5
Q ss_pred CCCcEEEEEECCCChhHHhhHHH-HHHHHHHhcC-CCeEEEEEE
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGS-YVELADKLAG-NGVKVGKFR 309 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~-~~~la~~~~~-~~v~~~~vd 309 (361)
..+..|+.|+...||+|+.+.+. +.++.+.|.+ .+|.|+..+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 45677999999999999999996 4788878832 267777654
No 329
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.53 E-value=0.021 Score=49.34 Aligned_cols=97 Identities=14% Similarity=0.184 Sum_probs=66.5
Q ss_pred eecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCchHHHHHcCCCCCCCeE
Q 018045 252 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPTI 330 (361)
Q Consensus 252 ~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~ 330 (361)
..++.++++.++.. +..+++.+.|....|.. ..+++..+.. ..+.+..++- .+ ..++ ++|+|+++|++
T Consensus 141 ~~~~~~~l~~~~~~-~~~~~~al~f~~~~~~~-------~~~~~~d~~~~~~i~v~~~~~-~~-~~l~-~~f~v~~~Psl 209 (244)
T 3q6o_A 141 EPAXLEEIDGFFAR-NNEEYLALIFEXGGSYL-------AREVALDLSQHKGVAVRRVLN-TE-ANVV-RKFGVTDFPSC 209 (244)
T ss_dssp SCCCHHHHHTHHHH-CCCSEEEEEEECTTCCH-------HHHHHHHTTTCTTEEEEEEET-TC-HHHH-HHHTCCCSSEE
T ss_pred ccccHHHHHHHhhc-CCCceEEEEEEECCcch-------HHHHHHHhccCCceEEEEEeC-ch-HHHH-HHcCCCCCCeE
Confidence 34556777776652 46678888888876543 3334444443 3677776663 45 7899 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 331 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++|..++. ...+.....+.+.+..+|+++
T Consensus 210 vl~~~~g~-~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 210 YLLFRNGS-VSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp EEEETTSC-EEECCCSSSSHHHHHHHHHTC
T ss_pred EEEeCCCC-eEeeccccccHHHHHHHHHhC
Confidence 99875543 666665566788888888765
No 330
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.52 E-value=0.0046 Score=44.34 Aligned_cols=56 Identities=18% Similarity=0.149 Sum_probs=40.2
Q ss_pred EEEEECC----CChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----CCc---hHHHHHcCCCC-----CCCeEEEEeC
Q 018045 273 LVVLYAP----WCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----GDQ---KEYAKQKLQLG-----SFPTILFFPK 335 (361)
Q Consensus 273 lv~F~a~----wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~-----~~~---~~l~~~~~~v~-----~~Pt~~~~~~ 335 (361)
++.|+.+ ||+.|++++..|++. ++.+-.+|++ .+. .++. +..+.. ++|++++ .+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-------gi~y~~idI~~~~~~~~~~~~~~l~-~~~g~~~~~~~tvP~v~i-~~ 72 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-------KQPFEFINIMPEKGVFDDEKIAELL-TKLGRDTQIGLTMPQVFA-PD 72 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-------TCCEEEEESCSBTTBCCHHHHHHHH-HHHTCSCCTTCCSCEEEC-TT
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-------CCCEEEEEeeccccccCHHHHHHHH-HHhCCCCCCCCccCEEEE-EC
Confidence 5678899 999999999888763 4677778887 441 2345 566777 8998754 35
Q ss_pred CC
Q 018045 336 HS 337 (361)
Q Consensus 336 g~ 337 (361)
|+
T Consensus 73 g~ 74 (87)
T 1aba_A 73 GS 74 (87)
T ss_dssp SC
T ss_pred CE
Confidence 55
No 331
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=96.43 E-value=0.0031 Score=61.15 Aligned_cols=107 Identities=21% Similarity=0.175 Sum_probs=65.3
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH----HHHHHhcCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV----QALVRSKGLF 84 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~----~~~~~~~~~~ 84 (361)
.++.+.+|||-||+++ .|+.+...++..+.+.... .+| .++++++++++|++.+++......+ ...+.....+
T Consensus 242 ~~vgv~LSGGlDSS~vaala~~~~~~v~tfti~~~~-~~E-~~~A~~vA~~lg~~h~~i~i~~~~~~~~l~~~~~~~~~~ 319 (513)
T 1jgt_A 242 DTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTDT-SNE-FREARAVVDHLRTRHREITIPTTELLAQLPYAVWASESV 319 (513)
T ss_dssp CCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECSS-CCC-HHHHHHHHHHHTCEEEEEECCHHHHHTTHHHHHHHHCCC
T ss_pred CcEEEECCCcHHHHHHHHHHHHhCCCceEEEcCCCC-CCH-HHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999877 7777765567777665532 333 5789999999999998876654322 2222211111
Q ss_pred CCCccchhchhhccccHHHHHHH-ccCCEEEEeeeccCCc
Q 018045 85 SFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSP 123 (361)
Q Consensus 85 ~~~~~~~~~cc~~~K~~pl~~~~-~~~~~~i~G~R~~Es~ 123 (361)
++..-+......-+.+.. .+.+++++|.-+||-.
T Consensus 320 -----~p~~~~~~~~~~~l~~~a~~g~~VvltG~GaDElf 354 (513)
T 1jgt_A 320 -----DPDIIEYLLPLTALYRALDGPERRILTGYGADIPL 354 (513)
T ss_dssp -----CHHHHHHHHHHHHHHHHCCSSCCEEECCTTTHHHH
T ss_pred -----CcccchhHHHHHHHHHHHHcCCCEEEeCCChhhcc
Confidence 010001111222333333 3667999999999964
No 332
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.42 E-value=0.0046 Score=46.56 Aligned_cols=49 Identities=14% Similarity=0.268 Sum_probs=34.8
Q ss_pred CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH---HcCCCCCCCeEEEEeCCC
Q 018045 279 PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 279 ~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~---~~~~v~~~Pt~~~~~~g~ 337 (361)
|||++|+..+..|.+. ++.|..+|++.+ +++.. +..+..++|.+++ +|+
T Consensus 31 p~Cp~C~~ak~~L~~~-------gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~ifi--~g~ 82 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL-------NVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLYI--GGE 82 (109)
T ss_dssp BSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEEE--TTE
T ss_pred CCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEEE--CCE
Confidence 5999999999888774 477888888776 44330 3347789997643 554
No 333
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=96.39 E-value=0.01 Score=57.98 Aligned_cols=107 Identities=15% Similarity=0.239 Sum_probs=64.2
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCC--------------ceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRP--------------FRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 74 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~--------------i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~ 74 (361)
.++.|.+|||.||+++ .++.+...+ +..+.+.... .+| .++++++++++|++.+++.......
T Consensus 227 vpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~-~~E-~~~A~~vA~~lg~~h~~i~~~~~~~ 304 (553)
T 1ct9_A 227 VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPG-SPD-LKAAQEVANHLGTVHHEIHFTVQEG 304 (553)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTT-CHH-HHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCCC-CcH-HHHHHHHHHHhCCCCEEEECCHHHH
Confidence 4789999999999877 777775432 5556554432 255 5889999999999998876654322
Q ss_pred ----HHHHHhcCCCCCCccchhchhhccccHHHHHHHc--cCCEEEEeeeccCCc
Q 018045 75 ----QALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSP 123 (361)
Q Consensus 75 ----~~~~~~~~~~~~~~~~~~~cc~~~K~~pl~~~~~--~~~~~i~G~R~~Es~ 123 (361)
.+.+.....+ . .....|. ....-+.+.++ +.+++++|.-+||-.
T Consensus 305 ~~~l~~~i~~~~~~---~-~~~~~~~-~~~~~l~~~a~~~g~~vvLsG~GaDElf 354 (553)
T 1ct9_A 305 LDAIRDVIYHIETY---D-VTTIRAS-TPMYLMSRKIKAMGIKMVLSGEGSDEVF 354 (553)
T ss_dssp HHHHHHHHHHHCCC---C-HHHHHHH-HHHHHHHHHHHHTTCCEEECCTTHHHHH
T ss_pred HHHHHHHHHHhcCC---C-cccchHH-HHHHHHHHHHHHcCCeEEEECCCchhcc
Confidence 2333222221 1 1111111 12233444333 578999999999853
No 334
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.34 E-value=0.0066 Score=44.14 Aligned_cols=54 Identities=9% Similarity=-0.022 Sum_probs=38.6
Q ss_pred EEEEECCCChhH------HhhHHHHHHHHHHhcCCCeEEEEEEcCCCchH----HHHHcCC--CCCCCeEEEEeCCC
Q 018045 273 LVVLYAPWCQFC------QAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQ--LGSFPTILFFPKHS 337 (361)
Q Consensus 273 lv~F~a~wC~~C------~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~~--v~~~Pt~~~~~~g~ 337 (361)
++.|++++|+.| +.+...|++ .++.|..+|++.+ ++ +. +.++ ...+|.+++ +|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~-------~~i~~~~~di~~~-~~~~~~l~-~~~g~~~~~vP~ifi--~g~ 69 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG-------KRIQYQLVDISQD-NALRDEMR-TLAGNPKATPPQIVN--GNH 69 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH-------TTCCCEEEETTSC-HHHHHHHH-HHTTCTTCCSCEEEE--TTE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH-------CCCceEEEECCCC-HHHHHHHH-HHhCCCCCCCCEEEE--CCE
Confidence 678899999999 666665553 2578888999876 33 44 4667 679998743 554
No 335
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.34 E-value=0.008 Score=45.41 Aligned_cols=56 Identities=13% Similarity=0.048 Sum_probs=39.0
Q ss_pred cEEEEEECCCChhHH------hhHHHHHHHHHHhcCCCeEEEEEEcCCCchH----HHHHcC--------CCCCCCeEEE
Q 018045 271 PWLVVLYAPWCQFCQ------AMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKL--------QLGSFPTILF 332 (361)
Q Consensus 271 ~vlv~F~a~wC~~C~------~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~----l~~~~~--------~v~~~Pt~~~ 332 (361)
.-++.|+.++|+.|+ .++..|++ .++.|..+|++.+ ++ +. ..+ +...+|.+++
T Consensus 8 m~V~vy~~~~C~~C~~~~~~~~ak~~L~~-------~gi~y~~vdI~~~-~~~~~~l~-~~~~~~~~~~~g~~tvP~vfi 78 (111)
T 2ct6_A 8 MVIRVFIASSSGFVAIKKKQQDVVRFLEA-------NKIEFEEVDITMS-EEQRQWMY-KNVPPEKKPTQGNPLPPQIFN 78 (111)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHH-------TTCCEEEEETTTC-HHHHHHHH-HSCCTTTCCSSSSCCSCEEEE
T ss_pred cEEEEEEcCCCCCcccchhHHHHHHHHHH-------cCCCEEEEECCCC-HHHHHHHH-HHhcccccccCCCCCCCEEEE
Confidence 347788999999999 55555543 2588899999877 44 44 444 6677898743
Q ss_pred EeCCC
Q 018045 333 FPKHS 337 (361)
Q Consensus 333 ~~~g~ 337 (361)
+|+
T Consensus 79 --~g~ 81 (111)
T 2ct6_A 79 --GDR 81 (111)
T ss_dssp --TTE
T ss_pred --CCE
Confidence 454
No 336
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.29 E-value=0.0054 Score=46.40 Aligned_cols=55 Identities=15% Similarity=0.314 Sum_probs=39.4
Q ss_pred EEEEEC-----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHH---HcCCCCCCCeEEEEeCCC
Q 018045 273 LVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 273 lv~F~a-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~---~~~~v~~~Pt~~~~~~g~ 337 (361)
+|.|.. +||++|+..+..|.+. ++.|..+|++.+ +++.. +..+...+|.+++ +|+
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~~~di~~d-~~~~~~l~~~~g~~tvP~ifi--~g~ 80 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKH-------NIQFSSFDIFSD-EEVRQGLKAYSSWPTYPQLYV--SGE 80 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEE--TTE
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHc-------CCCeEEEECcCC-HHHHHHHHHHHCCCCCCEEEE--CCE
Confidence 456777 9999999999888753 467788898876 44330 2337788999754 554
No 337
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.22 E-value=0.042 Score=48.15 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=54.5
Q ss_pred CCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC-----------------chHHHHHcCCCCCC--Ce
Q 018045 269 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----------------QKEYAKQKLQLGSF--PT 329 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~-----------------~~~l~~~~~~v~~~--Pt 329 (361)
....+..|++++|++|...+..+.+++..+ ++....++++.. +..+. ++++..++ |.
T Consensus 42 ~~~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~-~~~G~~tVyTPq 117 (270)
T 2axo_A 42 VKGVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYM-RALGRNGVYTPQ 117 (270)
T ss_dssp CCCEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHH-HHTTCSCCCSSE
T ss_pred CCcEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEEEecccccccchhhhhhhHHHHHHH-HHhCCCcccCCE
Confidence 346788899999999999999999998764 353333343211 03466 78899999 99
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
+++ +|+ ....| .+.+.|.+.|.+
T Consensus 118 I~I--ng~---~~v~G--~d~~~l~~~l~~ 140 (270)
T 2axo_A 118 AIL--NGR---DHVKG--ADVRGIYDRLDA 140 (270)
T ss_dssp EEE--TTT---EEEET--TCHHHHHHHHHH
T ss_pred EEE--CCE---EeecC--CCHHHHHHHHHH
Confidence 766 555 22333 457788777754
No 338
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=95.97 E-value=0.0023 Score=61.99 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=64.0
Q ss_pred CcEEEEecchHHHHHH-HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHH----HHHhcCCC
Q 018045 10 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQA----LVRSKGLF 84 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~~~~~~~----~~~~~~~~ 84 (361)
.++.+.+|||-||+++ .++.+...++..+.+.... .+| .++++++++++|++++++......+.+ .+.....+
T Consensus 239 ~~v~v~LSGGlDSs~vaala~~~~~~~~~~t~~~~~-~~E-~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~~~~~~~~ 316 (503)
T 1q15_A 239 DTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTEL-SNE-FEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEIF 316 (503)
T ss_dssp SEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEETT-BCC-HHHHHHHHHHHTCEEEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred CcEEEECCCCHHHHHHHHHHHHhCCCcEEEEEeCCC-ccH-HHHHHHHHHHhCCceEEEECCHHHHHHHHHHHHHHhcCC
Confidence 4789999999999877 6777766556656554431 233 578999999999999887666532222 11111111
Q ss_pred CCCccchhchhhccccHHHHHHH-ccCCEEEEeeeccCCc
Q 018045 85 SFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSP 123 (361)
Q Consensus 85 ~~~~~~~~~cc~~~K~~pl~~~~-~~~~~~i~G~R~~Es~ 123 (361)
++..-+.......+.+.. .+.+++++|.-+||-.
T Consensus 317 -----~p~~~~~~~~~~~l~~~a~~~~~VvltG~GaDElf 351 (503)
T 1q15_A 317 -----DGLSAEIQSGLFNVYRQAQGQVSCMLTGYGSDLLF 351 (503)
T ss_dssp -----CHHHHHHHHHHHHHHHHHBTTBSEEECCTTHHHHH
T ss_pred -----CcccchhHHHHHHHHHHHHCCCCEEEeCCChhhhc
Confidence 010001111222333333 3667999999999863
No 339
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=95.94 E-value=0.015 Score=44.64 Aligned_cols=49 Identities=20% Similarity=0.361 Sum_probs=34.6
Q ss_pred CCChhHHhhHHHHHHHHHHhcCCCeE---EEEEEcCCCchHHHH---HcCCCCCCCeEEEEeCCC
Q 018045 279 PWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQKEYAK---QKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 279 ~wC~~C~~~~p~~~~la~~~~~~~v~---~~~vd~~~~~~~l~~---~~~~v~~~Pt~~~~~~g~ 337 (361)
|||++|+..+..|.+. ++. |..+|++.+ .++.. +..+...+|.+++ +|+
T Consensus 29 p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~-~~~~~~l~~~sg~~tvP~vfI--~g~ 83 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLED-PELREGIKEFSEWPTIPQLYV--NKE 83 (121)
T ss_dssp BCTTHHHHHHHHHHHH-------TBCGGGEEEEECTTC-HHHHHHHHHHHTCCSSCEEEE--TTE
T ss_pred CCCccHHHHHHHHHHc-------CCCcceEEEEEecCC-HHHHHHHHHHhCCCCCCeEEE--CCE
Confidence 5999999999998875 244 777888776 44320 3447788999744 554
No 340
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=95.74 E-value=0.016 Score=44.30 Aligned_cols=64 Identities=19% Similarity=0.383 Sum_probs=41.4
Q ss_pred HHHHHhhcCCCCcEEEEEEC-----CCChhHHhhHHHHHHHHHHhcCCCeE-EEEEEcCCCchHHHH---HcCCCCCCCe
Q 018045 259 MENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADGDQKEYAK---QKLQLGSFPT 329 (361)
Q Consensus 259 f~~~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la~~~~~~~v~-~~~vd~~~~~~~l~~---~~~~v~~~Pt 329 (361)
++++++ ... ++.|.. |||++|+..+..|++. ++. |..+|++.+ +++.. +..+...+|.
T Consensus 13 v~~~i~----~~~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~vdV~~d-~~~~~~l~~~tg~~tvP~ 79 (118)
T 2wem_A 13 LDALVK----KDK-VVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTIPQ 79 (118)
T ss_dssp HHHHHH----HSS-EEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCCEEEESSSC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHhc----cCC-EEEEEecCCCCCccHHHHHHHHHHHHc-------CCCCCEEEEcCCC-HHHHHHHHHHhCCCCcCe
Confidence 455553 334 444555 5999999999888764 463 777888876 44330 2337788999
Q ss_pred EEEEeCCC
Q 018045 330 ILFFPKHS 337 (361)
Q Consensus 330 ~~~~~~g~ 337 (361)
+++ +|+
T Consensus 80 vfI--~g~ 85 (118)
T 2wem_A 80 VYL--NGE 85 (118)
T ss_dssp EEE--TTE
T ss_pred EEE--CCE
Confidence 743 554
No 341
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=95.57 E-value=0.027 Score=55.13 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=48.5
Q ss_pred CcEEEEecchHHHHHH-HHHHH-cCC-CceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEE
Q 018045 10 NDIAIAFSGAEDVALI-EYAHL-TGR-PFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYM 67 (361)
Q Consensus 10 ~~i~vs~SGGKDS~~l-~l~~~-~~~-~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~ 67 (361)
.+++|+.|||-||+++ .|+.+ .++ +|..+++-+-...++|++-...+++.+|+....+
T Consensus 301 ~~~vlglSGGiDSal~~~la~~alg~~~v~~v~mp~~~ts~~t~~~a~~la~~lg~~~~~i 361 (565)
T 4f4h_A 301 PGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMARRVGVRYDEI 361 (565)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCTTCCHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcEEEecCCCccHHHHHHHHHHHhCCccEEEEeccccccccchHHHHHHHHHHhCCceeee
Confidence 6899999999999877 55544 444 4777888888889999999999999999998776
No 342
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.46 E-value=0.051 Score=52.67 Aligned_cols=97 Identities=11% Similarity=0.163 Sum_probs=63.3
Q ss_pred ceecCcccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCchHHHHHcCCCCCCCe
Q 018045 251 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPT 329 (361)
Q Consensus 251 v~~l~~~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt 329 (361)
+..++.++++.++. .+..++++|.|.... .+...+++..+.. .++.+..++ +.+ .+++ ++|+|..+|+
T Consensus 140 l~~it~~~l~~~l~-~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~-~~l~-~kfgV~~~Ps 208 (519)
T 3t58_A 140 LEPAKLNDIDGFFT-RNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTE-SDLV-NKFGVTDFPS 208 (519)
T ss_dssp CSBCCHHHHTTGGG-SCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSSE
T ss_pred cCcCCHHHHHHHhc-cCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-Cch-HHHH-HHcCCCCCCe
Confidence 44466677777665 245678888888764 2355666666664 357776654 445 7999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 330 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 330 ~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
+++|..+++ .............+..+|++
T Consensus 209 lvl~~~nGk-~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 209 CYLLLRNGS-VSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp EEEEETTSC-EEECCCSSCSHHHHHHHHTT
T ss_pred EEEEeCCCc-eeecccccccHHHHHHHHHH
Confidence 999976654 33333322334555566554
No 343
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=94.96 E-value=0.045 Score=45.25 Aligned_cols=41 Identities=17% Similarity=0.359 Sum_probs=34.8
Q ss_pred CCcEEEEEECCCChhHHhhHHHH-HHHHHHhcCCCeEEEEEEc
Q 018045 269 QEPWLVVLYAPWCQFCQAMEGSY-VELADKLAGNGVKVGKFRA 310 (361)
Q Consensus 269 ~~~vlv~F~a~wC~~C~~~~p~~-~~la~~~~~~~v~~~~vd~ 310 (361)
.++++|.|+...||+|..+.+.+ .++.+.+.+ .+.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEec
Confidence 56788999999999999999999 999998876 677766654
No 344
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=94.86 E-value=0.053 Score=44.78 Aligned_cols=92 Identities=10% Similarity=0.168 Sum_probs=61.7
Q ss_pred CCCcEEEEEE-CCCChhHH-hhHHHHHHHHHHh-cCCCeE-EEEEEcCCC---------------------chHHHHHcC
Q 018045 268 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKL-AGNGVK-VGKFRADGD---------------------QKEYAKQKL 322 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~-~~~p~~~~la~~~-~~~~v~-~~~vd~~~~---------------------~~~l~~~~~ 322 (361)
.++.++|.|| +.||+.|. ...+.|.+..+++ +..++. ++.|.+|.. +.+++ +.|
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a-~~y 120 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFT-DSM 120 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHH-HHh
Confidence 4667777777 78999999 8899999999999 655663 776665431 14677 788
Q ss_pred CCC-----------CCCeEEEEeCCCCCeeecCC--C---------CCCHHHHHHHHHHh
Q 018045 323 QLG-----------SFPTILFFPKHSSKPIKYPS--E---------RRDVDSLMAFVDAL 360 (361)
Q Consensus 323 ~v~-----------~~Pt~~~~~~g~~~~~~~~~--~---------~~~~~~l~~~i~~~ 360 (361)
++. ...+.+++++|+........ + ..+++++.+.|++.
T Consensus 121 Gv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~~ 180 (182)
T 1xiy_A 121 NMLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKNN 180 (182)
T ss_dssp TCEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHCC
T ss_pred CCceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHhc
Confidence 763 24566777866643222211 1 25688888888753
No 345
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=94.17 E-value=0.1 Score=39.87 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=35.7
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHcC--------CCCCCCeEE
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKL--------QLGSFPTIL 331 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~--------~v~~~Pt~~ 331 (361)
||+.|+++.|+.|+-.... ..+...+...+|.|-.+|++.++ .++. ++. +...+|.++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c-~~aK~lL~~kgV~feEidI~~d~~~r~eM~-~~~~~~~~~~~G~~tvPQIF 69 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQ-QDVLGFLEANKIGFEEKDIAANEENRKWMR-ENVPENSRPATGYPLPPQIF 69 (121)
T ss_dssp CEEEEECTTCSCHHHHHHH-HHHHHHHHHTTCCEEEEECTTCHHHHHHHH-HHSCGGGSCSSSSCCSCEEE
T ss_pred CEEEEecCCCCCccchHHH-HHHHHHHHHCCCceEEEECCCCHHHHHHHH-HhccccccccCCCcCCCEEE
Confidence 4778899999999532211 11222233347999999998762 2344 455 666778654
No 346
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=93.76 E-value=0.6 Score=38.93 Aligned_cols=33 Identities=21% Similarity=0.472 Sum_probs=27.6
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEE
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKV 305 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~ 305 (361)
.|..|+.+-||.|-...|.++++.+.+.+ ++.+
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v 36 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQF 36 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEE
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCC-CceE
Confidence 57788889999999999999999999864 3444
No 347
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=91.99 E-value=0.21 Score=37.96 Aligned_cols=66 Identities=18% Similarity=0.330 Sum_probs=40.8
Q ss_pred ccHHHHHhhcCCCCcEEEEEEC-----CCChhHHhhHHHHHHHHHHhcCCCe-EEEEEEcCCCchHHHH---HcCCCCCC
Q 018045 257 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGV-KVGKFRADGDQKEYAK---QKLQLGSF 327 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a-----~wC~~C~~~~p~~~~la~~~~~~~v-~~~~vd~~~~~~~l~~---~~~~v~~~ 327 (361)
+..+++++ ++ +| |.|.. |.|++|.+....|... ++ .|..+|++.+ +++.. +.-+-..+
T Consensus 11 e~i~~~i~---~~-~V-vvF~Kgt~~~P~C~fc~~ak~lL~~~-------gv~~~~~~~v~~~-~~~r~~l~~~sg~~Tv 77 (118)
T 2wul_A 11 EQLDALVK---KD-KV-VVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTI 77 (118)
T ss_dssp HHHHHHHH---HS-SE-EEEESBCSSSBSSHHHHHHHHHHHHT-------TCCSCEEEETTSC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHHHh---cC-CE-EEEEcCCCCCCCCHHHHHHHHHHHHh-------CCcCeEeecccCC-HHHHHHHHHhccCCCC
Confidence 44566664 33 33 44443 6799999998877543 34 3777888777 44330 34466788
Q ss_pred CeEEEEeCCC
Q 018045 328 PTILFFPKHS 337 (361)
Q Consensus 328 Pt~~~~~~g~ 337 (361)
|.+++ +|+
T Consensus 78 PqIFI--~g~ 85 (118)
T 2wul_A 78 PQVYL--NGE 85 (118)
T ss_dssp CEEEE--TTE
T ss_pred CeEeE--CCE
Confidence 98743 555
No 348
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.64 E-value=0.49 Score=35.89 Aligned_cols=34 Identities=6% Similarity=0.015 Sum_probs=26.3
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 313 (361)
+..|+.++|+.|++....+++. ++.|-.+|+..+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~ 40 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKKE 40 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeCC
Confidence 6678899999999998888763 466767777543
No 349
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=90.55 E-value=0.12 Score=47.27 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=35.4
Q ss_pred EEEEECCCChhHHhhHH-HHHHHHHHhcCCCeEEEEEEcCCCc----hHHHHHcCCCCCCCeEEEEeCCC
Q 018045 273 LVVLYAPWCQFCQAMEG-SYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p-~~~~la~~~~~~~v~~~~vd~~~~~----~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
++.|..+||+.|++.+. .|++..-.+. .+.++.+|-...+ ..+. +..+...+|++++ +|+
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~--eidVlEld~~~~~~e~~~~L~-~~tG~~TVPqVFI--~Gk 327 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRS--KVLVLQLNDMKEGADIQAALY-EINGQRTVPNIYI--NGK 327 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTT--TEEEEEGGGSTTHHHHHHHHH-HHHCCCSSCEEEE--TTE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcc--eEEEEEeccccCCHHHHHHHH-HHHCCCCcCEEEE--CCE
Confidence 66789999999999875 4554432222 2444433321211 2344 5568899998754 554
No 350
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=90.42 E-value=4 Score=29.82 Aligned_cols=82 Identities=10% Similarity=0.063 Sum_probs=64.1
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhc-CCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCH
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLA-GNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 350 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~-~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~ 350 (361)
....|.|..-+.++.....+.++-+.+. +..+.+--||+.++ +.++ +.++|-.+||++=....- .....| ..-.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eq-PeLA-E~~~IvATPTLIK~~P~P--~rriiG-d~i~ 87 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQ-PQLV-EYYRLVVTPALVKIGPGS--RQVLSG-IDLT 87 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTC-HHHH-HHTTCCSSSEEEEEESSS--CEEEES-SCHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccC-HHHH-hHcCeeeccHhhccCCCC--ceEEeC-hHHH
Confidence 5557778888889988888888877765 44788999999999 9999 999999999999876543 344455 4556
Q ss_pred HHHHHHHH
Q 018045 351 DSLMAFVD 358 (361)
Q Consensus 351 ~~l~~~i~ 358 (361)
+.|..|.-
T Consensus 88 ~ql~~wwp 95 (105)
T 1t4y_A 88 DQLANQLP 95 (105)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhH
Confidence 77777753
No 351
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=90.27 E-value=0.45 Score=39.01 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=32.9
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHh-cCCCeEEEEEE
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFR 309 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~-~~~~v~~~~vd 309 (361)
..+.+|+.|....||+|+.+.+.+.++.+.+ .+ +|.|+.-+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g-~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED-NVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT-TEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-CEEEEEEE
Confidence 4567788888999999999999998877776 44 68777655
No 352
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=90.23 E-value=0.21 Score=40.67 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=35.8
Q ss_pred CCCcEEEEEE-CCCChhHHhhHHHHHHHHHHhcCCCeE-EEEEEcCC
Q 018045 268 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADG 312 (361)
Q Consensus 268 ~~~~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~v~-~~~vd~~~ 312 (361)
.++.+|+.|| +.||+.|....+.|.+..++++..++. ++.|.+|.
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~ 87 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVND 87 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 4667777777 679999999999999999998765674 77776654
No 353
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=90.08 E-value=0.65 Score=37.88 Aligned_cols=42 Identities=17% Similarity=0.329 Sum_probs=32.2
Q ss_pred CCCcEEEEEECCCChhHHhhHHHH-HHHHHHhcC-CCeEEEEEE
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFR 309 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~vd 309 (361)
..+..|+.|+...||+|..+.+.+ ..+.+.|.+ .++.+....
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 467789999999999999999998 578777753 256666544
No 354
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=88.55 E-value=0.54 Score=39.32 Aligned_cols=43 Identities=12% Similarity=0.242 Sum_probs=33.6
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
...+ .+++|.++||++++.+|+. ...+.| ..+.+.|.+.|+++
T Consensus 166 ~~~a-~~~gv~g~Pt~~i~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 166 FQRV-AQWGISGFPALVVESGTDR-YLITTG-YRPIEALRQLLDTW 208 (216)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCcccceEEEEECCEE-EEeccC-CCCHHHHHHHHHHH
Confidence 5667 7899999999999988872 224455 68899999998764
No 355
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=87.93 E-value=1.1 Score=37.35 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=32.1
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHH-Hhc-CCCeEEEEEEc
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELAD-KLA-GNGVKVGKFRA 310 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~-~~~-~~~v~~~~vd~ 310 (361)
..+.+||.|...-||+|+.+.+.+....+ .|- ..+|.++..+.
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 45667889999999999999998865544 772 23788876664
No 356
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=87.63 E-value=0.45 Score=41.65 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=26.2
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHH
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADK 297 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~ 297 (361)
..+.+++.|+-+.||+|+++.+.+++..+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 467899999999999999999999966554
No 357
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=86.60 E-value=0.56 Score=46.06 Aligned_cols=66 Identities=14% Similarity=0.268 Sum_probs=43.0
Q ss_pred ccHHHHHhhcCCCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--c----hHHHHHcCCCCCCCeE
Q 018045 257 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--Q----KEYAKQKLQLGSFPTI 330 (361)
Q Consensus 257 ~~f~~~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~--~----~~l~~~~~~v~~~Pt~ 330 (361)
+.+++++. +. -++.|..+||+.|+.++..|.+. ++.+-.+|++.. . ..+. +..+...+|.+
T Consensus 9 ~~v~~~i~---~~--~v~vy~~~~Cp~C~~~k~~L~~~-------~i~~~~~dv~~~~~~~~~~~~l~-~~~g~~tvP~v 75 (598)
T 2x8g_A 9 QWLRKTVD---SA--AVILFSKTTCPYCKKVKDVLAEA-------KIKHATIELDQLSNGSAIQKCLA-SFSKIETVPQM 75 (598)
T ss_dssp HHHHHHHH---HC--SEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHTH-HHHSCCCSCEE
T ss_pred HHHHHHhc---cC--CEEEEECCCChhHHHHHHHHHHC-------CCCcEEEEcccCcchHHHHHHHH-HHhCCceeCEE
Confidence 34555554 33 37789999999999999888754 355556676642 1 2233 34578899987
Q ss_pred EEEeCCC
Q 018045 331 LFFPKHS 337 (361)
Q Consensus 331 ~~~~~g~ 337 (361)
|-+|+
T Consensus 76 --~i~g~ 80 (598)
T 2x8g_A 76 --FVRGK 80 (598)
T ss_dssp --EETTE
T ss_pred --EECCE
Confidence 34554
No 358
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=85.02 E-value=1.6 Score=32.57 Aligned_cols=36 Identities=17% Similarity=0.439 Sum_probs=29.6
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 310 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~ 310 (361)
|.++|.|..|.|+-|......+.++ .+ ...+.+||+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~l----ed-eY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEEL----KS-EYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTT----TT-TEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHh----hc-cccEEEEEe
Confidence 5689999999999999988888444 44 578888887
No 359
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=84.10 E-value=1.2 Score=34.25 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=27.0
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 313 (361)
++.|+.++|+.|+.....+++. ++.|-.+|++.+
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCceEEEEccCC
Confidence 6678999999999998888762 477777888764
No 360
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=80.79 E-value=2 Score=32.47 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=26.9
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 313 (361)
+..|+.|+|+.|+.....+++. ++.|-.+|+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-------DVVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-------CCCeEEEecccC
Confidence 5678899999999998777642 577888888664
No 361
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=76.95 E-value=3.7 Score=30.91 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=27.3
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 313 (361)
.+..|+.|+|+.|++....+++- ++.|-.+|+.++
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 38 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDL-------AWDYDAIDIKKN 38 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHH-------TCCEEEEETTTS
T ss_pred eEEEEeCCCChHHHHHHHHHHHc-------CCceEEEEeccC
Confidence 35678899999999998777642 477878888665
No 362
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=76.76 E-value=2.4 Score=34.37 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=29.2
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
..++ ++++|.++||+++ +|+ . +.| ..+.+.|.+.|+++
T Consensus 139 ~~~a-~~~gv~GtPt~vv--nG~--~--~~G-~~~~~~l~~~i~~~ 176 (186)
T 3bci_A 139 KKIA-KDNHIKTTPTAFI--NGE--K--VED-PYDYESYEKLLKDK 176 (186)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE--E--CSC-TTCHHHHHHHHHC-
T ss_pred HHHH-HHcCCCCCCeEEE--CCE--E--cCC-CCCHHHHHHHHHHH
Confidence 5667 7899999999987 665 2 344 68899999999764
No 363
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=76.59 E-value=2 Score=31.98 Aligned_cols=34 Identities=12% Similarity=-0.058 Sum_probs=26.3
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 313 (361)
+..|+.|+|+.|+.....|++. ++.|-.+|+.++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~-------gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH-------KVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC-------CCceEEEeecCC
Confidence 5678899999999998877762 477777787643
No 364
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=75.30 E-value=2.9 Score=34.06 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=30.6
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
..++ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 142 ~~~a-~~~gv~GtPtfvv--ng~~-~v~~~G-a~~~e~~~~~i~~l 182 (185)
T 3feu_A 142 KMLS-EKSGISSVPTFVV--NGKY-NVLIGG-HDDPKQIADTIRYL 182 (185)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTTE-EECGGG-CSSHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EEecCC-CCCHHHHHHHHHHH
Confidence 5667 7899999999997 6662 233455 67889998888765
No 365
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=70.57 E-value=11 Score=27.63 Aligned_cols=63 Identities=13% Similarity=0.240 Sum_probs=45.4
Q ss_pred HHHHHHHHHHh---cCCCeEEEEEEcCCCch----------HHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHH
Q 018045 288 EGSYVELADKL---AGNGVKVGKFRADGDQK----------EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLM 354 (361)
Q Consensus 288 ~p~~~~la~~~---~~~~v~~~~vd~~~~~~----------~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~ 354 (361)
.|++-.++..+ +..++.+.+.|...+ + ++. +++++..+|.+++ +|+ +...|..-+.++|.
T Consensus 26 d~eL~~~~~~~~~lk~~Gi~V~RyNL~~~-P~~F~~N~~V~~~L-~~~G~~~LP~~~V--DGe---vv~~G~yPt~eEl~ 98 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQGIIVTRHNLRDE-PQVYVSNKTVNDFL-QKHGADALPITLV--DGE---IAVSQTYPTTKQMS 98 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEETTTC-TTHHHHSHHHHHHH-HTTCGGGCSEEEE--TTE---EEECSSCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEccccC-hHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE---EEEeccCCCHHHHH
Confidence 45555555443 334799999999887 4 566 6899999998766 565 55556578999999
Q ss_pred HHH
Q 018045 355 AFV 357 (361)
Q Consensus 355 ~~i 357 (361)
+|+
T Consensus 99 ~~l 101 (106)
T 3ktb_A 99 EWT 101 (106)
T ss_dssp HHH
T ss_pred HHh
Confidence 987
No 366
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=69.04 E-value=3.9 Score=30.83 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=26.7
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 313 (361)
+..|+.|+|+.|++....+++- ++.|-.+|+.++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 39 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN-------NIEYTNRLIVDD 39 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTT
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCceEEEecccC
Confidence 6678899999999998777642 577777888665
No 367
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=68.11 E-value=1.5 Score=35.64 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=29.0
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
...+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 152 ~~~a-~~~gv~gtPt~~i--ng~~-~~~~~g-~~~~~~l~~~i~~~ 192 (195)
T 3c7m_A 152 KASY-DVAKIQGVPAYVV--NGKY-LIYTKS-IKSIDAMADLIREL 192 (195)
T ss_dssp GGHH-HHHHHHCSSEEEE--TTTE-EECGGG-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EeccCC-CCCHHHHHHHHHHH
Confidence 4566 7889999999766 6662 222223 67899999998865
No 368
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=66.75 E-value=5.1 Score=32.57 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=27.3
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeee-cCCCCCCHHHHHHHH
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIK-YPSERRDVDSLMAFV 357 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~-~~~~~~~~~~l~~~i 357 (361)
...+ ++++|.++||+++ +|+ ... ..| ..+.+++.++|
T Consensus 144 ~~~a-~~~GV~gtPtf~i--ng~--~~~~~s~-~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYA-RQNGIHVSPTFMI--NGL--VQPGMSS-GDPVSKWVSDI 181 (182)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTE--ECTTCCT-TSCHHHHHHHH
T ss_pred HHHH-HHCCCCccCEEEE--CCE--EccCCCC-CCCHHHHHHHh
Confidence 3556 7889999999987 666 332 344 68889888876
No 369
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=66.60 E-value=8.6 Score=31.31 Aligned_cols=38 Identities=24% Similarity=0.301 Sum_probs=27.3
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
..++ ++++|.++||+++ +|+ .. ..+ . +.+.|.+.|+.+
T Consensus 144 ~~~a-~~~gv~gtPt~vv--ng~--~~-~~~-~-~~e~l~~~i~~l 181 (193)
T 3hz8_A 144 QELT-ETFQIDGVPTVIV--GGK--YK-VEF-A-DWESGMNTIDLL 181 (193)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT--EE-ECC-S-SHHHHHHHHHHH
T ss_pred HHHH-HHhCCCcCCEEEE--CCE--EE-ecC-C-CHHHHHHHHHHH
Confidence 4567 7899999999987 665 22 223 3 788888877654
No 370
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=61.82 E-value=11 Score=27.84 Aligned_cols=64 Identities=11% Similarity=0.280 Sum_probs=44.2
Q ss_pred HHHHHHHHHHh---cCCCeEEEEEEcCCCch----------HHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHH
Q 018045 288 EGSYVELADKL---AGNGVKVGKFRADGDQK----------EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLM 354 (361)
Q Consensus 288 ~p~~~~la~~~---~~~~v~~~~vd~~~~~~----------~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~ 354 (361)
.|.+-.++..+ +..++.+.+.|...+ + ++. +++++..+|.+++ +|+ +...|..-+.++|.
T Consensus 23 d~~L~~~~~~~~~lk~~Gi~V~RyNL~~~-P~aF~~N~~V~~~L-~~~G~~~LP~~~V--DGe---vv~~G~yPt~eEl~ 95 (110)
T 3kgk_A 23 DQALVDFSTDVQWLKQSGVQIERFNLAQQ-PMSFVQNEKVKAFI-EASGAEGLPLLLL--DGE---TVMAGRYPKRAELA 95 (110)
T ss_dssp -CHHHHHHHHHHHHHHHTCCEEEEETTTC-TTHHHHSHHHHHHH-HHHCGGGCCEEEE--TTE---EEEESSCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCeEEEEccccC-hHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE---EEEeccCCCHHHHH
Confidence 34454444433 223699999999887 4 556 6789999998766 565 44455568899999
Q ss_pred HHHH
Q 018045 355 AFVD 358 (361)
Q Consensus 355 ~~i~ 358 (361)
+|+.
T Consensus 96 ~~lg 99 (110)
T 3kgk_A 96 RWFG 99 (110)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9874
No 371
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=61.35 E-value=2.5 Score=30.92 Aligned_cols=61 Identities=8% Similarity=-0.087 Sum_probs=48.2
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEE
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 332 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~ 332 (361)
+.++..|-+-.-+.++.....+.++-+.+-+..+.+--||+.++ +.++ ..++|-.+||++-
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~-PelA-e~~~IvAtPTLiK 67 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKN-PQLA-EEDKILATPTLAK 67 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC-CSCC-TTCEEECHHHHGG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccC-HhHH-hHCCeEEechhhh
Confidence 35566666657788888888888876665444889999999999 9999 8999999998753
No 372
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=60.67 E-value=11 Score=32.09 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=29.2
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
...+ .+++|.++||+++ +|+ ..+.| ..+.+.|.+.|+++
T Consensus 173 ~~~a-~~~Gv~GvPtfvv--~g~---~~v~G-a~~~e~~~~~i~~~ 211 (239)
T 3gl5_A 173 EREA-AQLGATGVPFFVL--DRA---YGVSG-AQPAEVFTQALTQA 211 (239)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT---EEEES-SCCHHHHHHHHHHH
T ss_pred HHHH-HHCCCCeeCeEEE--CCc---EeecC-CCCHHHHHHHHHHH
Confidence 4556 6899999999987 554 23345 68899999988764
No 373
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=59.86 E-value=5.9 Score=32.85 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=26.9
Q ss_pred HcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 320 QKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 320 ~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
++++|.++||+++ +|+ .+.| ..+.+.|.+.|+++
T Consensus 162 ~~~GV~GtPtfvv--ng~----~~~G-~~~~e~l~~~i~~~ 195 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI----LLAG-THDWASLRPQILAR 195 (205)
T ss_dssp HHHCCCSSSEEEE--TTE----ECTT-CCSHHHHHHHHHHH
T ss_pred HHcCCccCCEEEE--CCE----EEeC-CCCHHHHHHHHHHH
Confidence 4689999999988 554 2455 68999999999864
No 374
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=58.83 E-value=23 Score=33.76 Aligned_cols=76 Identities=11% Similarity=0.035 Sum_probs=51.4
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCC
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSER 347 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~ 347 (361)
-.++|.+.++.+-|..|..+...++++++.- + ++.+.. + +.. . ...|++.+.++|+...+.|.| -
T Consensus 17 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~s-~-~i~~~~-~-~~~------~----~~~p~~~~~~~~~~~~i~f~g-~ 81 (521)
T 1hyu_A 17 LTKPVELIATLDDSAKSAEIKELLAEIAELS-D-KVTFKE-D-NTL------P----VRKPSFLITNPGSQQGPRFAG-S 81 (521)
T ss_dssp CCSCEEEEEECCSSHHHHHHHHHHHHHHTTC-T-TEEEEE-C-TTS------S----SCSSEEEEECTTCCCSCEEES-C
T ss_pred CCCCEEEEEEeCCCcchHHHHHHHHHHHHhC-C-ceEEEE-c-CCc------c----cCCCEEEEecCCCcceEEEec-c
Confidence 4778888888888999999999999987653 3 576632 1 111 1 468999999877655567766 2
Q ss_pred CCHHHHHHHHH
Q 018045 348 RDVDSLMAFVD 358 (361)
Q Consensus 348 ~~~~~l~~~i~ 358 (361)
-.-.++..||.
T Consensus 82 p~g~e~~s~~~ 92 (521)
T 1hyu_A 82 PLGHEFTSLVL 92 (521)
T ss_dssp CCGGGHHHHHH
T ss_pred CcchhHHHHHH
Confidence 33344555444
No 375
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=58.50 E-value=20 Score=29.27 Aligned_cols=39 Identities=15% Similarity=0.333 Sum_probs=29.2
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEE
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 309 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd 309 (361)
...|..|+...||.|....+.+.++.+.... ++.+....
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~-~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEYSA-FLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcCCC-CeEEEEee
Confidence 3567888889999999999999999884332 46665443
No 376
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=56.88 E-value=12 Score=30.39 Aligned_cols=20 Identities=5% Similarity=0.225 Sum_probs=16.5
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCC
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
...+ ++++|.++||+++ +|+
T Consensus 135 ~~~a-~~~gv~GtPt~~v--ng~ 154 (189)
T 3l9v_A 135 ERLF-KEYGVRGTPSVYV--RGR 154 (189)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCCccCEEEE--CCE
Confidence 4566 7899999999997 666
No 377
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=55.00 E-value=7.6 Score=31.86 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=28.6
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 360 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~~ 360 (361)
...+ .+++|.++||+++ +|+ .+.| ....+.|.+.|++.
T Consensus 157 ~~~a-~~~Gv~G~Ptfvi--~g~----~~~G-~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 157 THAA-IERKVFGVPTMFL--GDE----MWWG-NDRLFMLESAMGRL 194 (203)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHHH
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEEC-CCCHHHHHHHHhcc
Confidence 4566 7899999999988 554 3445 67788898888764
No 378
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=54.17 E-value=7.3 Score=30.24 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=42.8
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHcCCCCCCCeEEEEeCCCCCeee---cCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIK---YPSE 346 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~---~~l~~~~~~v~~~Pt~~~~~~g~~~~~~---~~~~ 346 (361)
+..|+.|+|+.|++....|++- ++.|-.+|+..+. .++. .-++-.++|.--+++.... ... ....
T Consensus 4 itiY~~p~C~~crkak~~L~~~-------gi~~~~idi~~~~~~~~eL~-~~~~~~g~p~~~l~n~~~~-~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-------GTEPTIILYLENPPSRDELV-KLIADMGISVRALLRKNVE-PYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-------TCCCEEECTTTSCCCHHHHH-HHHHHHTSCHHHHBCSSSH-HHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCEEEEECCCCCccHHHHH-HHhcccCCCHHHhccCCch-hHHhcCCccc
Confidence 4578899999999988777652 5777778887641 2232 2233334564444433321 111 1111
Q ss_pred CCCHHHHHHHHH
Q 018045 347 RRDVDSLMAFVD 358 (361)
Q Consensus 347 ~~~~~~l~~~i~ 358 (361)
..+.+++.+.+.
T Consensus 75 ~ls~~~~~~lm~ 86 (141)
T 1s3c_A 75 KFTDDQLIDFML 86 (141)
T ss_dssp CCCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 246666666554
No 379
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=52.94 E-value=6.5 Score=29.59 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=26.4
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 313 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~ 313 (361)
+..|+.|+|+.|++....+++ .++.|-.+|+.++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~ 40 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLET 40 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTS
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccC
Confidence 567889999999998877653 2577778888765
No 380
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=52.73 E-value=8 Score=31.81 Aligned_cols=20 Identities=20% Similarity=0.388 Sum_probs=15.9
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCC
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
...+ +.++|.++|++++ +|+
T Consensus 40 ~~~a-~~~gi~gvP~fvi--ngk 59 (197)
T 1un2_A 40 EKAA-ADVQLRGVPAMFV--NGK 59 (197)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHcCCCcCCEEEE--cce
Confidence 4566 7899999999976 555
No 381
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=52.09 E-value=7.3 Score=28.13 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=19.0
Q ss_pred EeeCccCcHHHHHHHHHhCCC
Q 018045 151 WNPVANVKGNDIWNFLRTMDV 171 (361)
Q Consensus 151 ~~Pi~~W~~~dv~~yi~~~~l 171 (361)
-.|+..|+.+||-.|+...|+
T Consensus 14 ~~~v~~Ws~edV~~WL~~~Gl 34 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLENAM 34 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHTTC
T ss_pred CCchhhCCHHHHHHHHHHcCC
Confidence 468899999999999999886
No 382
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=50.98 E-value=9 Score=28.69 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=25.0
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 312 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~ 312 (361)
+..|+.|+|+.|++....+++- ++.|-.+|+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-------gi~~~~~di~~ 38 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLENQ-------GIAPQVIKYLE 38 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-------TCCCEEECHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCceEEEEecc
Confidence 5678899999999998777651 46677777654
No 383
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=49.35 E-value=3.9 Score=27.69 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=18.3
Q ss_pred eeCccCcHHHHHHHHHhCCC
Q 018045 152 NPVANVKGNDIWNFLRTMDV 171 (361)
Q Consensus 152 ~Pi~~W~~~dv~~yi~~~~l 171 (361)
.|+..||.+||-.++...|+
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl 21 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSL 21 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTT
T ss_pred CCcccCCHHHHHHHHHHCCC
Confidence 48899999999999999986
No 384
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=45.32 E-value=6.5 Score=26.87 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=16.5
Q ss_pred eeCccCcHHHHHHHHHhC
Q 018045 152 NPVANVKGNDIWNFLRTM 169 (361)
Q Consensus 152 ~Pi~~W~~~dv~~yi~~~ 169 (361)
.|+..||.+||-.++...
T Consensus 1 k~v~~Wt~~~V~~WL~~~ 18 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRH 18 (78)
T ss_dssp CCGGGCCHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHH
Confidence 488999999999999986
No 385
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=44.44 E-value=12 Score=25.85 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=19.1
Q ss_pred EEeeCccCcHHHHHHHHHhCCCC
Q 018045 150 KWNPVANVKGNDIWNFLRTMDVP 172 (361)
Q Consensus 150 ~~~Pi~~W~~~dv~~yi~~~~lp 172 (361)
+-.|+..|+.+||-.++...|++
T Consensus 3 ~~~~v~~Ws~~~V~~WL~~lgl~ 25 (81)
T 3bq7_A 3 KTRPVHLWGTEEVAAWLEHLSLC 25 (81)
T ss_dssp --CCGGGCCHHHHHHHHHHTTCG
T ss_pred CCCChhhCCHHHHHHHHHHCCCH
Confidence 35689999999999999999864
No 386
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=43.72 E-value=12 Score=26.51 Aligned_cols=20 Identities=25% Similarity=0.564 Sum_probs=17.5
Q ss_pred eeCccCcHHHHHHHHHhC-CC
Q 018045 152 NPVANVKGNDIWNFLRTM-DV 171 (361)
Q Consensus 152 ~Pi~~W~~~dv~~yi~~~-~l 171 (361)
.|+..|+.+||-.|+... |+
T Consensus 12 ~~v~~Ws~edV~~wL~~l~gl 32 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIRELPGC 32 (89)
T ss_dssp CCGGGCCHHHHHHHHHTSTTC
T ss_pred CCchhCCHHHHHHHHHHCcCh
Confidence 488999999999999987 54
No 387
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=41.99 E-value=67 Score=27.74 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=45.4
Q ss_pred HHHHhHh-CCcEEEEecchHH--HHHHHHHHHcCCCceEEEcc-CCC--CcHHHHHHHHHHH---HHhCCcE--EEEcCC
Q 018045 2 DRALEKF-GNDIAIAFSGAED--VALIEYAHLTGRPFRVFSLD-TGR--LNPETYRFFDEVE---KHFGIRI--EYMFPD 70 (361)
Q Consensus 2 ~~~~~~~-~~~i~vs~SGGKD--S~~l~l~~~~~~~i~v~~~d-tg~--~~pet~~~v~~~~---~~~g~~i--~~~~p~ 70 (361)
+.+++.+ |..++-+.||++| --++.++.+.+.++.+++.| .|. ...+..+++++.. .+.|++- +++.|-
T Consensus 92 ~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg 171 (271)
T 2yci_X 92 EAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPL 171 (271)
T ss_dssp HHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecC
Confidence 4455555 5678888999988 56778899999888888876 342 2345566655543 3458863 455453
No 388
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=39.36 E-value=21 Score=29.14 Aligned_cols=38 Identities=11% Similarity=0.104 Sum_probs=0.0
Q ss_pred chHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 314 QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 314 ~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
+...+ .+++|.++||+++ +|+ .+.| ....+.|.++|.+
T Consensus 162 ~~~~a-~~~Gv~GvPtfvv--~g~----~~~G-~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 162 IGEDA-VARGIFGSPFFLV--DDE----PFWG-WDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHT
T ss_pred HHHHH-HHCCCCcCCEEEE--CCE----EEec-CCCHHHHHHHHhc
No 389
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=37.77 E-value=29 Score=29.16 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=29.5
Q ss_pred hHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 315 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 315 ~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
...+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|.+
T Consensus 172 ~~~a-~~~Gv~GvPtfvv~~~g~--~~~f~G-~drl~~l~~~L~~ 212 (234)
T 3rpp_A 172 TEAA-CRYGAFGLPITVAHVDGQ--THMLFG-SDRMELLAHLLGE 212 (234)
T ss_dssp HHHH-HHTTCSSSCEEEEEETTE--EEEEES-SSCHHHHHHHHTC
T ss_pred HHHH-HHcCCCCCCEEEEeCCCC--cCceeC-ccCHHHHHHHhcc
Confidence 4556 688999999998833564 355666 5778888888754
No 390
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=35.32 E-value=50 Score=26.69 Aligned_cols=34 Identities=9% Similarity=0.101 Sum_probs=27.1
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEE
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGK 307 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~ 307 (361)
|..|+-.-||.|....+.++++.+.+.- .|.+--
T Consensus 3 I~~~~D~~CP~cy~~~~~l~~~~~~~~~-~v~~~p 36 (203)
T 2imf_A 3 VDFYFDFLSPFSYLANQRLSKLAQDYGL-TIRYNA 36 (203)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcCC-eEEEEe
Confidence 6678888999999999999999999853 344433
No 391
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=34.41 E-value=36 Score=28.24 Aligned_cols=42 Identities=12% Similarity=0.023 Sum_probs=0.0
Q ss_pred chHHHHHcCCCCCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 314 QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 314 ~~~l~~~~~~v~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
+...+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|.+
T Consensus 171 ~~~~a-~~~gv~G~Ptfvv~~~g~--~~~~~G-~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 171 TTGAA-CKYGAFGLPTTVAHVDGK--TYMLFG-SDRMELLAYLLGE 212 (226)
T ss_dssp HHHHH-HHTTCCSSCEEEEEETTE--EEEEES-TTCHHHHHHHHTC
T ss_pred HHHHH-HHCCCCCCCEEEEeCCCC--cCceeC-CCcHHHHHHHhcC
No 392
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=33.70 E-value=1.1e+02 Score=24.55 Aligned_cols=59 Identities=10% Similarity=0.149 Sum_probs=39.0
Q ss_pred cEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCC
Q 018045 271 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 271 ~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
..+..|+.+.|+.|....=.++.. +-.+....||.....+++. +......+|++. .+|.
T Consensus 5 ~~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~--~~g~ 63 (216)
T 3lyk_A 5 SVMTLFSNKDDIYCHQVKIVLAEK-----GVLYENAEVDLQALPEDLM-ELNPYGTVPTLV--DRDL 63 (216)
T ss_dssp -CEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE--ETTE
T ss_pred ceEEEEeCCCChhHHHHHHHHHHc-----CCCcEEEeCCcccCcHHHH-hhCCCCCcCeEE--ECCe
Confidence 457889999999999977555443 2245666666654325666 556667899987 4443
No 393
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=33.36 E-value=1.3e+02 Score=21.45 Aligned_cols=74 Identities=5% Similarity=-0.057 Sum_probs=48.9
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEE-eCCCCCeeecCCCCC
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF-PKHSSKPIKYPSERR 348 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~-~~g~~~~~~~~~~~~ 348 (361)
-|...|-+|.+.++.++..++.-...++. ..+.|.. ... . ..-|.+..+ .+|.++.+...+ .
T Consensus 21 ~l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v---~~~------~----~~~P~i~a~Y~~G~ek~i~l~n--~ 85 (102)
T 1s3a_A 21 EIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILI---REC------S----DVQPKLWARYAFGQETNVPLNN--F 85 (102)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEE---ECC------C----SSSCEEEEEESSCCEEEEECTT--C
T ss_pred EEEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEE---EEC------C----CCCCEEEEEECCCCEEEEECCC--C
Confidence 36677788988888888877655444433 2466552 122 0 247876665 677765666654 8
Q ss_pred CHHHHHHHHHHh
Q 018045 349 DVDSLMAFVDAL 360 (361)
Q Consensus 349 ~~~~l~~~i~~~ 360 (361)
+.+++.+.|+.+
T Consensus 86 s~~eI~~~l~~l 97 (102)
T 1s3a_A 86 SADQVTRALENV 97 (102)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999876
No 394
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=32.21 E-value=18 Score=25.58 Aligned_cols=23 Identities=9% Similarity=0.160 Sum_probs=19.9
Q ss_pred EEEeeCccCcHHHHHHHHHhCCC
Q 018045 149 VKWNPVANVKGNDIWNFLRTMDV 171 (361)
Q Consensus 149 ~~~~Pi~~W~~~dv~~yi~~~~l 171 (361)
+...|+..|+.+||-.++...|+
T Consensus 12 ~~~~~v~~Wt~~dV~~WL~~~gl 34 (91)
T 1v85_A 12 LVHKAVDKWTTEEVVLWLEQLGP 34 (91)
T ss_dssp HHHSCGGGCCHHHHHHHHHHHCG
T ss_pred CCCCCcccCCHHHHHHHHHHcCC
Confidence 34568899999999999999887
No 395
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=31.80 E-value=1.2e+02 Score=25.98 Aligned_cols=68 Identities=19% Similarity=0.276 Sum_probs=43.4
Q ss_pred HHHHhHh-CCcEEEEecchHHH--HHHHHHHHcCCCceEEEcc-CCC--CcHHHHHHHHHH---HHHhCCc--EEEEcC
Q 018045 2 DRALEKF-GNDIAIAFSGAEDV--ALIEYAHLTGRPFRVFSLD-TGR--LNPETYRFFDEV---EKHFGIR--IEYMFP 69 (361)
Q Consensus 2 ~~~~~~~-~~~i~vs~SGGKDS--~~l~l~~~~~~~i~v~~~d-tg~--~~pet~~~v~~~---~~~~g~~--i~~~~p 69 (361)
+.+++.+ |..++-+.||+.|. -++.++.+.+.++.+++.| .|. .+.+..+++++. +...|++ =+++.|
T Consensus 83 ~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDP 161 (262)
T 1f6y_A 83 EAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDP 161 (262)
T ss_dssp HHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEEC
T ss_pred HHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeC
Confidence 4455654 56778889999887 6778999998888777775 342 233444444443 4456885 234544
No 396
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=31.55 E-value=70 Score=26.28 Aligned_cols=100 Identities=9% Similarity=-0.052 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHcCCCceEEEccCCCC---cHHHHHHHHHHHHHhCCcEEEEc---CChHHHHHHHHhcCCCCCCccch
Q 018045 18 GAEDVALIEYAHLTGRPFRVFSLDTGRL---NPETYRFFDEVEKHFGIRIEYMF---PDAVEVQALVRSKGLFSFYEDGH 91 (361)
Q Consensus 18 GGKDS~~l~l~~~~~~~i~v~~~dtg~~---~pet~~~v~~~~~~~g~~i~~~~---p~~~~~~~~~~~~~~~~~~~~~~ 91 (361)
-+--+.+.+++.+.. .-.++|++|+.. +.+-.+-+.+..+++|.++.++. .+.....+.+.....-.++--+.
T Consensus 12 ~~~~~~~~~f~~~~~-~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~ 90 (206)
T 3l4e_A 12 KDVVPLFTEFESNLQ-GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNT 90 (206)
T ss_dssp GGCHHHHHHHSCCCT-TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEEECCSCH
T ss_pred cchHHHHHHHHHHcC-CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEEECCCCH
Confidence 433344445543332 257899998853 44555566677778899887764 33322323333322111222345
Q ss_pred hchhhccccHHHHHHHccC---CEEEEeee
Q 018045 92 QECCRVRKVRPLRRALKGL---RAWITGQR 118 (361)
Q Consensus 92 ~~cc~~~K~~pl~~~~~~~---~~~i~G~R 118 (361)
..+...++...+...+++. ...+.|+-
T Consensus 91 ~~l~~~L~~~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 91 FFLLQELKRTGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTCEEEEET
T ss_pred HHHHHHHHHCChHHHHHHHHHcCCeEEEEC
Confidence 5677777776666665532 35566653
No 397
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=30.25 E-value=37 Score=27.38 Aligned_cols=32 Identities=6% Similarity=-0.067 Sum_probs=23.0
Q ss_pred EEEec-chHHHHHHHHHHHcCCCceEEEccCCCCcH
Q 018045 13 AIAFS-GAEDVALIEYAHLTGRPFRVFSLDTGRLNP 47 (361)
Q Consensus 13 ~vs~S-GGKDS~~l~l~~~~~~~i~v~~~dtg~~~p 47 (361)
+++-+ .||.+...+|+.+ + .+++|++|+..+.
T Consensus 4 V~Gg~~SGKS~~A~~la~~-~--~~~~yiaT~~~~d 36 (180)
T 1c9k_A 4 VTGGARSGKSRHAEALIGD-A--PQVLYIATSQILD 36 (180)
T ss_dssp EEECTTSSHHHHHHHHHCS-C--SSEEEEECCCC--
T ss_pred EECCCCCcHHHHHHHHHhc-C--CCeEEEecCCCCC
Confidence 45556 6799888888876 4 4689999987553
No 398
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.25 E-value=22 Score=25.77 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=19.8
Q ss_pred EeeCccCcHHHHHHHHHhCCCC
Q 018045 151 WNPVANVKGNDIWNFLRTMDVP 172 (361)
Q Consensus 151 ~~Pi~~W~~~dv~~yi~~~~lp 172 (361)
-.|+..|+.+||-.|+...|+.
T Consensus 24 ~~~v~~Ws~~~V~~WL~~lgl~ 45 (103)
T 2e8o_A 24 HPDYKTWGPEQVCSFLRRGGFE 45 (103)
T ss_dssp CSCGGGCHHHHHHHHHHHHTCC
T ss_pred ccChhhCCHHHHHHHHHHcCCC
Confidence 5688999999999999999875
No 399
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=28.74 E-value=3.6 Score=21.43 Aligned_cols=11 Identities=36% Similarity=0.742 Sum_probs=8.8
Q ss_pred CChhHHhhHHH
Q 018045 280 WCQFCQAMEGS 290 (361)
Q Consensus 280 wC~~C~~~~p~ 290 (361)
-|+.|++++|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 38999998874
No 400
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=28.20 E-value=30 Score=23.47 Aligned_cols=19 Identities=16% Similarity=0.522 Sum_probs=16.6
Q ss_pred eeCccCcHHHHHHHHHhCC
Q 018045 152 NPVANVKGNDIWNFLRTMD 170 (361)
Q Consensus 152 ~Pi~~W~~~dv~~yi~~~~ 170 (361)
.|+..||.+||-.++...+
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~ 20 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLD 20 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSC
T ss_pred CccccCCHHHHHHHHHHHh
Confidence 4899999999999999653
No 401
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=27.18 E-value=1.1e+02 Score=22.75 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=23.2
Q ss_pred CcEEEEecchHHHH-HH----HHHHHcCCCceEEEccC
Q 018045 10 NDIAIAFSGAEDVA-LI----EYAHLTGRPFRVFSLDT 42 (361)
Q Consensus 10 ~~i~vs~SGGKDS~-~l----~l~~~~~~~i~v~~~dt 42 (361)
.+|+|++.|...|. ++ .|+.+.+.++.++|+-.
T Consensus 7 ~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~ 44 (150)
T 3tnj_A 7 HHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLD 44 (150)
T ss_dssp SEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEEC
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEEc
Confidence 58999988877763 22 56666777788887643
No 402
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=26.80 E-value=2.6e+02 Score=23.59 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=36.6
Q ss_pred CcEEEEecchHHHH-HH----HHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEE
Q 018045 10 NDIAIAFSGAEDVA-LI----EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEY 66 (361)
Q Consensus 10 ~~i~vs~SGGKDS~-~l----~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~ 66 (361)
.+|+|++.|...|. ++ .|+...+.++.++++.....-.+.++-+.+..+..|+++..
T Consensus 171 ~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~ 232 (294)
T 3loq_A 171 DRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHV 232 (294)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEE
Confidence 58999999887764 22 45556677888888876544344444444444556777543
No 403
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=26.20 E-value=1.4e+02 Score=24.53 Aligned_cols=58 Identities=12% Similarity=0.108 Sum_probs=38.9
Q ss_pred CCCcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCC-CCCCeEE
Q 018045 268 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL-GSFPTIL 331 (361)
Q Consensus 268 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v-~~~Pt~~ 331 (361)
..+..+..|+.+.|+.|+...=.++.. +-.+.+..||.....+++. +.... ..+|++.
T Consensus 8 ~~~~~~~Ly~~~~sp~~~~vr~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~nP~~g~vPvL~ 66 (231)
T 4dej_A 8 NKRSVMTLYSGKDDLKSHQVRLVLAEK-----GVGVEITYVTDESTPEDLL-QLNPYPEAKPTLV 66 (231)
T ss_dssp -CCSSCEEEECSSCHHHHHHHHHHHHH-----TCBCEEEECCSSCCCHHHH-HHCCSSSCCSEEE
T ss_pred CCCceEEEEcCCCChHHHHHHHHHHHc-----CCCcEEEEcCcccCCHHHH-HhCCCCCCCCEEE
Confidence 345667889999999999887666554 2135566666654325666 55566 7899987
No 404
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=26.13 E-value=1.6e+02 Score=23.50 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=35.2
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEE
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 331 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~ 331 (361)
+-+|+++.||.|++..=.+++. +-.+....||......++. +..-...+|++.
T Consensus 4 m~LY~~~~sP~~~rvr~~L~e~-----gi~~e~~~v~~~~~~~~~~-~~nP~g~vPvL~ 56 (210)
T 4hoj_A 4 MTLYSGITCPFSHRCRFVLYEK-----GMDFEIKDIDIYNKPEDLA-VMNPYNQVPVLV 56 (210)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE
T ss_pred EEEecCCCChHHHHHHHHHHHc-----CCCCEEEEeCCCCCCHHHH-HHCCCCCCcEEE
Confidence 4467789999999876555443 2245666777655424555 555667899986
No 405
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=25.99 E-value=96 Score=24.98 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=34.7
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEE
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 331 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~ 331 (361)
+..|+.+.|+.|+...-.++.. +-.+....||.... .... +......+|++.
T Consensus 4 ~~Ly~~~~sp~~~~v~~~l~~~-----gi~~~~~~v~~~~~-~~~~-~~~p~~~vP~l~ 55 (218)
T 3ir4_A 4 MKLYIYDHCPFCVKARMIFGLK-----NIPVELNVLQNDDE-ATPT-RMIGQKMVPILQ 55 (218)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTCC-HHHH-HHHSSSCSCEEE
T ss_pred EEEEcCCCCchHHHHHHHHHHc-----CCceEEEECCCcch-hhhh-hcCCCceeeeEE
Confidence 4678899999999887665443 22456666666655 4444 444567789886
No 406
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=24.59 E-value=23 Score=25.85 Aligned_cols=21 Identities=14% Similarity=0.110 Sum_probs=17.7
Q ss_pred EEEeeCccCcHHHHHHHHHhC
Q 018045 149 VKWNPVANVKGNDIWNFLRTM 169 (361)
Q Consensus 149 ~~~~Pi~~W~~~dv~~yi~~~ 169 (361)
....|+..|+.+||-.|+...
T Consensus 18 ~~~~~v~~Wt~~~V~~WL~~~ 38 (106)
T 3bs5_A 18 TRPKAVYLWTVSDVLKWYRRH 38 (106)
T ss_dssp --CCCGGGCCHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHH
Confidence 356789999999999999988
No 407
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=24.24 E-value=88 Score=23.67 Aligned_cols=35 Identities=17% Similarity=0.361 Sum_probs=23.1
Q ss_pred CCCCeEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 018045 325 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 359 (361)
Q Consensus 325 ~~~Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~i~~ 359 (361)
-.-|++++|+..........-...+.++|.+||++
T Consensus 54 Ga~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 54 GADPELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp SCCCEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 35789999954433222222235899999999975
No 408
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=23.88 E-value=38 Score=23.78 Aligned_cols=19 Identities=5% Similarity=0.198 Sum_probs=16.1
Q ss_pred eeCccCcHHHHHHHHHhCC
Q 018045 152 NPVANVKGNDIWNFLRTMD 170 (361)
Q Consensus 152 ~Pi~~W~~~dv~~yi~~~~ 170 (361)
.++..||.+||-.|+....
T Consensus 12 ~~v~~WsvedV~~wl~~~~ 30 (89)
T 1pk1_B 12 SQPIDWTIEEVIQYIESND 30 (89)
T ss_dssp CCGGGCCHHHHHHHHHHHC
T ss_pred CCchhCCHHHHHHHHHHHc
Confidence 4567999999999999874
No 409
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=23.77 E-value=43 Score=22.53 Aligned_cols=19 Identities=11% Similarity=0.186 Sum_probs=16.7
Q ss_pred CccCcHHHHHHHHHhCCCC
Q 018045 154 VANVKGNDIWNFLRTMDVP 172 (361)
Q Consensus 154 i~~W~~~dv~~yi~~~~lp 172 (361)
+..||.+||-+++...|++
T Consensus 2 v~~Ws~~~V~~WL~~lgl~ 20 (76)
T 2f3n_A 2 LQLWSKFDVGDWLESIHLG 20 (76)
T ss_dssp GGGCCHHHHHHHHHHTTCG
T ss_pred hhhCCHHHHHHHHHHCCCH
Confidence 4689999999999999874
No 410
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=23.47 E-value=33 Score=24.35 Aligned_cols=13 Identities=15% Similarity=0.820 Sum_probs=11.1
Q ss_pred HHHHHHHHhCCCC
Q 018045 160 NDIWNFLRTMDVP 172 (361)
Q Consensus 160 ~dv~~yi~~~~lp 172 (361)
..+|+||+.++|-
T Consensus 34 k~lW~YIK~n~Lq 46 (93)
T 1uhr_A 34 QALWQYIKTHKLQ 46 (93)
T ss_dssp HHHHHHHHHTTCB
T ss_pred HHHHHHHHhccCC
Confidence 5699999999984
No 411
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=23.35 E-value=33 Score=24.32 Aligned_cols=14 Identities=14% Similarity=0.593 Sum_probs=11.4
Q ss_pred HHHHHHHHHhCCCC
Q 018045 159 GNDIWNFLRTMDVP 172 (361)
Q Consensus 159 ~~dv~~yi~~~~lp 172 (361)
...+|+||+.++|-
T Consensus 33 vk~lW~YIK~n~Lq 46 (93)
T 1v31_A 33 IAAIWHYVKARKLQ 46 (93)
T ss_dssp HHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHccCc
Confidence 35699999999973
No 412
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=23.26 E-value=1.3e+02 Score=26.19 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=43.7
Q ss_pred HHHhHhCCcEEEEecchHHHHHHHHHHHcCCCceEEEccCCC--C------c----HHHHHHHHHHHH---HhCCcEEEE
Q 018045 3 RALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGR--L------N----PETYRFFDEVEK---HFGIRIEYM 67 (361)
Q Consensus 3 ~~~~~~~~~i~vs~SGGKDS~~l~l~~~~~~~i~v~~~dtg~--~------~----pet~~~v~~~~~---~~g~~i~~~ 67 (361)
.+++. |..++-+.||+.|--++.++.+.+.++.++|.+.|. . | .+..+++++..+ ..|++=+++
T Consensus 118 aAl~a-Ga~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~Iil 196 (294)
T 2dqw_A 118 EALKL-GAHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVL 196 (294)
T ss_dssp HHHHH-TCSEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEE
T ss_pred HHHHh-CCCEEEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEE
Confidence 44444 667888899888888889999999888888876221 1 1 355666554443 458873445
Q ss_pred cC
Q 018045 68 FP 69 (361)
Q Consensus 68 ~p 69 (361)
.|
T Consensus 197 DP 198 (294)
T 2dqw_A 197 DP 198 (294)
T ss_dssp EC
T ss_pred cC
Confidence 55
No 413
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=23.24 E-value=2.2e+02 Score=23.35 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=30.9
Q ss_pred CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEE
Q 018045 279 PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 331 (361)
Q Consensus 279 ~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~ 331 (361)
..|+.|+...=.+... +-.+....||.....+++. +......+|++.
T Consensus 22 ~~sp~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~g~VPvL~ 68 (241)
T 1k0m_A 22 GNCPFSQRLFMVLWLK-----GVTFNVTTVDTKRRTETVQ-KLCPGGELPFLL 68 (241)
T ss_dssp CSCHHHHHHHHHHHHH-----TCCCEEEEECTTSCCHHHH-HHCTTCCSSEEE
T ss_pred CCCHHHHHHHHHHHHc-----CCccEEEEcCCcccHHHHH-HhCCCCCCCEEE
Confidence 3899999877666542 2245666777643325666 555677899986
No 414
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=23.17 E-value=1.7e+02 Score=28.14 Aligned_cols=69 Identities=16% Similarity=0.222 Sum_probs=44.9
Q ss_pred HHHHhHh-CCcEEEEecchHH--HHHHHHHHHcCCCceEEEccC--CCCcHHHHHHHHHHH---HHhCCc-EEEEcCC
Q 018045 2 DRALEKF-GNDIAIAFSGAED--VALIEYAHLTGRPFRVFSLDT--GRLNPETYRFFDEVE---KHFGIR-IEYMFPD 70 (361)
Q Consensus 2 ~~~~~~~-~~~i~vs~SGGKD--S~~l~l~~~~~~~i~v~~~dt--g~~~pet~~~v~~~~---~~~g~~-i~~~~p~ 70 (361)
+.+++-+ |..++-+.||+.| --++.++.+.+..+.+++.|- -..+.+.++++++.. .++|++ =+++.|-
T Consensus 398 eaal~~~~G~~iINdis~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg 475 (566)
T 1q7z_A 398 ERALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPG 475 (566)
T ss_dssp HHHHHHCSSCCEEEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECC
T ss_pred HHHHHhcCCCCEEEECCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCC
Confidence 4555555 4678888999988 567789999998888888773 233444555554443 355884 3355554
No 415
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=22.96 E-value=2.3e+02 Score=22.70 Aligned_cols=53 Identities=11% Similarity=0.080 Sum_probs=34.3
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEE
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 332 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~ 332 (361)
+..++.++|+.|+...=.++.. +-.+....|+-+.. +++. +......+|++..
T Consensus 3 ~~Ly~~~~sp~~~~v~~~L~~~-----gi~ye~~~v~~~~~-~~~~-~~~P~g~vP~L~~ 55 (229)
T 3lxz_A 3 LKLYGFSVSNYYNMVKLALLEK-----GLTFEEVTFYGGQA-PQAL-EVSPRGKVPVLET 55 (229)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCEEEEECCCCSC-HHHH-TTSTTSCSCEEEE
T ss_pred EEEEeCCCCchHHHHHHHHHHc-----CCCCEEEecCCCCC-HHHH-hhCCCCCcCeEEe
Confidence 5678899999999876555443 21344444444444 6666 5556678998864
No 416
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=22.94 E-value=22 Score=27.77 Aligned_cols=23 Identities=26% Similarity=0.341 Sum_probs=18.7
Q ss_pred EEeeCccCcHHHHHHHHHhC-CCC
Q 018045 150 KWNPVANVKGNDIWNFLRTM-DVP 172 (361)
Q Consensus 150 ~~~Pi~~W~~~dv~~yi~~~-~lp 172 (361)
+-.|+.+||.+||-.++... ++|
T Consensus 74 ~~s~V~nWTvedV~~WL~~~v~Lp 97 (150)
T 2l5y_A 74 KTSEVHNWTLEDTLQWLIEFVELP 97 (150)
T ss_dssp HTSHHHHCCHHHHHHHHHHHTCCT
T ss_pred ccCcchhCCHHHHHHHHHHcCCcH
Confidence 45688999999999999884 553
No 417
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=22.88 E-value=2.6e+02 Score=22.10 Aligned_cols=54 Identities=17% Similarity=0.243 Sum_probs=34.9
Q ss_pred EEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEE
Q 018045 272 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 331 (361)
Q Consensus 272 vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~ 331 (361)
.+..|+.+.|+.|+...=.++.. +-.+....||.+...+++. +......+|++.
T Consensus 10 ~~~Ly~~~~s~~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~ 63 (213)
T 1yy7_A 10 VMTLFSGPTDIFSHQVRIVLAEK-----GVSVEIEQVEADNLPQDLI-DLNPYRTVPTLV 63 (213)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHH-----TCCEEEEECCTTSCCHHHH-HHCTTCCSSEEE
T ss_pred ceEEEcCCCChhHHHHHHHHHHc-----CCCCeEEeCCcccCcHHHH-HHCCCCCCCEEE
Confidence 47788899999998876555443 2134555555543324555 555567899987
No 418
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=22.80 E-value=27 Score=25.31 Aligned_cols=13 Identities=8% Similarity=0.227 Sum_probs=10.9
Q ss_pred HHHHHHHHhCCCC
Q 018045 160 NDIWNFLRTMDVP 172 (361)
Q Consensus 160 ~dv~~yi~~~~lp 172 (361)
.-+|+||+.++|-
T Consensus 42 k~lW~YIK~nnLQ 54 (101)
T 1v32_A 42 DTIAKYISKEGLL 54 (101)
T ss_dssp HHHHHHHHHHTCB
T ss_pred HHHHHHHHhhcCc
Confidence 4599999999983
No 419
>1fme_A FSD-EY peptide; beta-BETA-alpha, zinc finger, designed protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1fsd_A 1fsv_A 2k6r_A* 1psv_A
Probab=22.79 E-value=64 Score=16.49 Aligned_cols=15 Identities=20% Similarity=0.481 Sum_probs=12.3
Q ss_pred CCCHHHHHHHHHHhC
Q 018045 347 RRDVDSLMAFVDALR 361 (361)
Q Consensus 347 ~~~~~~l~~~i~~~~ 361 (361)
.++..+|.+||++++
T Consensus 12 frnekelrdfiekfk 26 (28)
T 1fme_A 12 FRNEKELRDFIEKFK 26 (28)
T ss_dssp ECCHHHHHHHHHHCC
T ss_pred cccHHHHHHHHHHhc
Confidence 467899999999864
No 420
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*
Probab=22.64 E-value=1.6e+02 Score=25.12 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=32.2
Q ss_pred CcEEEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCchHHHHHcCCCCCCCeEEE
Q 018045 270 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILF 332 (361)
Q Consensus 270 ~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~--~~~~~l~~~~~~v~~~Pt~~~ 332 (361)
...+..|+.++|+.|+...-.+++. ++.+-.++++ .. .++ +......+|++..
T Consensus 12 ~~~~~Ly~~~~sp~~~~v~~~L~~~-------gi~~~~~~v~~~~~-~~~--~~~p~~~vP~l~~ 66 (290)
T 1z9h_A 12 RLQLTLYQYKTCPFCSKVRAFLDFH-------ALPYQVVEVNPVLR-AEI--KFSSYRKVPILVA 66 (290)
T ss_dssp -CEEEEEECTTCHHHHHHHHHHHHT-------TCCEEEEECCTTTC-GGG--TTCSCCSSCEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-------CCCeEEEECChhhH-HHH--HHcCCCCCCEEEE
Confidence 3457788899999999877665543 2444444443 22 232 2345567998865
No 421
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=21.42 E-value=1.3e+02 Score=24.41 Aligned_cols=58 Identities=16% Similarity=0.228 Sum_probs=35.6
Q ss_pred EEEEECCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHcCCCCCCCeEEEEeCCC
Q 018045 273 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 337 (361)
Q Consensus 273 lv~F~a~wC~~C~~~~p~~~~la~~~~~~~v~~~~vd~~~~~~~l~~~~~~v~~~Pt~~~~~~g~ 337 (361)
+=+||++.||.|++..=.+.+. +-.+.+..||..+.+.++. +..-...+|+++. .+|.
T Consensus 23 MKLy~~~~SP~~~rVr~~L~e~-----gi~~e~~~v~~~~~~~~~~-~~nP~gkVPvL~~-~dG~ 80 (225)
T 4glt_A 23 MKLLYSNTSPYARKVRVVAAEK-----RIDVDMVLVVLADPECPVA-DHNPLGKIPVLIL-PDGE 80 (225)
T ss_dssp CEEEECSSCHHHHHHHHHHHHH-----TCCCEEEECCTTCSSSCGG-GTCTTCCSCEEEC-TTSC
T ss_pred ceEecCCCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCHHHH-HhCCCCCCCEEEe-CCCC
Confidence 4478999999999877665543 2245666777654423444 3333557898753 3444
No 422
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=20.91 E-value=3.6e+02 Score=24.32 Aligned_cols=62 Identities=16% Similarity=0.202 Sum_probs=38.3
Q ss_pred HhCCcEEEEecchHHHHHHHHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHhCCcEEEEcCC
Q 018045 7 KFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPD 70 (361)
Q Consensus 7 ~~~~~i~vs~SGGKDS~~l~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~g~~i~~~~p~ 70 (361)
.++..-++.+++|..+..+.+..-..+.-.|+..+. .|+.++..++.+.+++|.+++.+...
T Consensus 93 ~~g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~--~y~~~~~~~~~~~~~~g~~~~~v~~~ 154 (414)
T 3ndn_A 93 IEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARS--LFGSCFVVCSEILPRWGVQTVFVDGD 154 (414)
T ss_dssp HHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESC--CCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred HHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCC--ccchHHHHHHHHHHHcCcEEEEeCCC
Confidence 345344577888876643322111333334554444 37889998888889999998877543
No 423
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=20.82 E-value=2.3e+02 Score=20.98 Aligned_cols=66 Identities=8% Similarity=-0.003 Sum_probs=38.9
Q ss_pred HHHhHhCCcEEEEecchHHHHHHHHHHHcCCCceEEEccCCCCcHHHHHHHHHHHHHh-CCcEEEEcCC
Q 018045 3 RALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD 70 (361)
Q Consensus 3 ~~~~~~~~~i~vs~SGGKDS~~l~l~~~~~~~i~v~~~dtg~~~pet~~~v~~~~~~~-g~~i~~~~p~ 70 (361)
.+++..+-.++..++.+.+.. .++.+..+...++++|....--...++++++.+.. ++++.++...
T Consensus 54 ~~L~~~g~~v~~~~~~~~~al--~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 54 QIFTSEGFNIIDTAADGEEAV--IKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHTTCEEEEEESSHHHHH--HHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHhCCCeEEEEECCHHHHH--HHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 445555434432566666543 33444422356788887755455677888887766 5677776554
No 424
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=20.34 E-value=27 Score=27.27 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=18.2
Q ss_pred EEeeCccCcHHHHHHHHHhC-CC
Q 018045 150 KWNPVANVKGNDIWNFLRTM-DV 171 (361)
Q Consensus 150 ~~~Pi~~W~~~dv~~yi~~~-~l 171 (361)
+-+|+.+||.+||-.++... ++
T Consensus 74 ~~s~V~nWTvedV~~WL~~~v~L 96 (150)
T 2k60_A 74 KSSEVYNWTVDEVVQWLITYVEL 96 (150)
T ss_dssp HHSHHHHCCHHHHHHHHHHHHCC
T ss_pred ccCccccCCHHHHHHHHHHcCCc
Confidence 45789999999999999764 44
No 425
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=20.13 E-value=2.2e+02 Score=20.50 Aligned_cols=35 Identities=6% Similarity=0.078 Sum_probs=23.1
Q ss_pred CcEEEEecchHHHH-HH----HHH-HHcCCCceEEEccCCC
Q 018045 10 NDIAIAFSGAEDVA-LI----EYA-HLTGRPFRVFSLDTGR 44 (361)
Q Consensus 10 ~~i~vs~SGGKDS~-~l----~l~-~~~~~~i~v~~~dtg~ 44 (361)
.+|+|++.|...|. ++ .|+ .+.+..+.++|+-...
T Consensus 2 ~~ILv~~D~s~~s~~al~~a~~la~~~~~a~l~ll~v~~~~ 42 (138)
T 3idf_A 2 KKLLFAIDDTEACERAAQYILDMFGKDADCTLTLIHVKPEF 42 (138)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTTCTTEEEEEEEEECCC
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHhccCCCCEEEEEEEecCC
Confidence 37899999887774 33 445 4455567777776553
Done!