BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018048
(361 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 ALPHA PE=1 SV=1
Length = 428
Score = 563 bits (1451), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/346 (79%), Positives = 300/346 (86%), Gaps = 10/346 (2%)
Query: 1 MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLKTG--TSFLGSTRKLRVNSVHSNQGNV 58
MATA++ K + L+ S +N L P++ +SFLGSTR L + + N N
Sbjct: 1 MATAFAPTKLTATVPLHG-----SHENRLLLPIRLAPPSSFLGSTRSLSLRRL--NHSNA 53
Query: 59 RRRLPVVAVSEVVKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGF 118
RR PVV+V EVVKEK+ + ++LLITK+EGLELYEDMILGRSFEDMCAQMYYRGKMFGF
Sbjct: 54 TRRSPVVSVQEVVKEKQSTNNTSLLITKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGF 113
Query: 119 VHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQG 178
VHLYNGQEAVSTGFIKLL K DSVVSTYRDHVHALSKGV ARAVMSELFGK TGCCRGQG
Sbjct: 114 VHLYNGQEAVSTGFIKLLTKSDSVVSTYRDHVHALSKGVSARAVMSELFGKVTGCCRGQG 173
Query: 179 GSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNN 238
GSMHMFSKEHN+LGGFAFIGEGIPVATGAAF+SKYRREVLK+ DCD VT+AFFGDGTCNN
Sbjct: 174 GSMHMFSKEHNMLGGFAFIGEGIPVATGAAFSSKYRREVLKQ-DCDDVTVAFFGDGTCNN 232
Query: 239 GQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDV 298
GQFFECLNMAAL+KLPI+FVVENNLWAIGMSHLRATSDP+I+KKGPAFGMPG HVDGMDV
Sbjct: 233 GQFFECLNMAALYKLPIIFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDV 292
Query: 299 LKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPGE 344
LKVREVAKEA+ RARRGEGPTLVECETYRFRGHSLADPDELRD E
Sbjct: 293 LKVREVAKEAVTRARRGEGPTLVECETYRFRGHSLADPDELRDAAE 338
>sp|Q7XTJ3|ODPA3_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os04g0119400 PE=2
SV=2
Length = 425
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/263 (88%), Positives = 246/263 (93%), Gaps = 2/263 (0%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T++E LELYEDM+LGR FEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLL + D VV
Sbjct: 73 VTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADCVV 132
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
STYRDHVHALSKGVPAR+VM+ELFGKATGCCRGQGGSMHMFS+ HNLLGGFAFIGEGIPV
Sbjct: 133 STYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPV 192
Query: 204 ATGAAFTSKYRREVLKEADCD--HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVEN 261
ATGAAF +KYR EVLK++ D VTLAFFGDGTCNNGQFFECLNMA LWKLPIVFVVEN
Sbjct: 193 ATGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVEN 252
Query: 262 NLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLV 321
NLWAIGMSHLRATSDP+IYKKGPAFGMPG HVDGMDVLKVREVAKEAIERARRGEGPTLV
Sbjct: 253 NLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLV 312
Query: 322 ECETYRFRGHSLADPDELRDPGE 344
ECETYRFRGHSLADPDELR P E
Sbjct: 313 ECETYRFRGHSLADPDELRRPDE 335
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 196/272 (72%), Positives = 227/272 (83%)
Query: 73 EKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGF 132
E + + + + +TK + L LYEDM+LGR+FEDMCAQMYY+GKMFGFVHLYNGQEAVSTG
Sbjct: 8 ELPLTNCNQINLTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGV 67
Query: 133 IKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLG 192
IKLL +D V STYRDHVHALSKGVP++ VM+ELFGK TGC RG+GGSMH+FS HN LG
Sbjct: 68 IKLLDSKDYVCSTYRDHVHALSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNFLG 127
Query: 193 GFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWK 252
GFAFI EGIPVATGAAF S YR++VLKE VT FFGDGT NNGQFFECLNMA LWK
Sbjct: 128 GFAFIAEGIPVATGAAFQSIYRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVLWK 187
Query: 253 LPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERA 312
LPI+FVVENN WAIGM+H R++S P+I+KK AFG+PG VDGMDVL VR+VA++A+ERA
Sbjct: 188 LPIIFVVENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERA 247
Query: 313 RRGEGPTLVECETYRFRGHSLADPDELRDPGE 344
R+G+GPTL+E TYRFRGHSLADPDELR E
Sbjct: 248 RQGQGPTLIEALTYRFRGHSLADPDELRSRQE 279
>sp|Q1XDM0|ODPA_PORYE Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
yezoensis GN=pdhA PE=3 SV=1
Length = 346
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/265 (72%), Positives = 221/265 (83%)
Query: 80 SNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE 139
+ L + K L LYEDM+LGR+FEDMCAQMYY+GKMFGFVHLYNGQEAVSTG IKLL
Sbjct: 17 TGLNLNKSNLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLNPT 76
Query: 140 DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGE 199
D V STYRDHVHALSKGVP++ VM+ELFGK TGC +G+GGSMH+FS HN LGGFAFI E
Sbjct: 77 DYVCSTYRDHVHALSKGVPSKNVMAELFGKETGCSKGRGGSMHIFSAPHNFLGGFAFIAE 136
Query: 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 259
GIPVATGAAF S YR++VLKE + VT FFGDGT NNGQFFECLNMA LWKLPI+FVV
Sbjct: 137 GIPVATGAAFQSIYRQQVLKETEDLRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVV 196
Query: 260 ENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319
ENN WAIGM+H R++S P+I+KK AFG+PG VDGMDVL VR+ AK+A++RAR+G+GPT
Sbjct: 197 ENNQWAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPT 256
Query: 320 LVECETYRFRGHSLADPDELRDPGE 344
L+E TYRFRGHSLADPDELR E
Sbjct: 257 LIEALTYRFRGHSLADPDELRSRQE 281
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 167/256 (65%), Gaps = 8/256 (3%)
Query: 86 KQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKK-EDSVVS 144
++E LE Y M++ R FE+ C Q+Y G + GF HLY GQEAV+ G L+ DSV++
Sbjct: 36 REELLEFYRRMLMIRRFEERCGQLYGLGLIAGFCHLYIGQEAVAVGLQAALQPGRDSVIT 95
Query: 145 TYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVA 204
YR+H H L+ G+ + VM+EL G+A+G G+GGSMHMFS EH GG +G +P+
Sbjct: 96 GYREHGHMLAYGIDPKIVMAELTGRASGISHGKGGSMHMFSTEHKFFGGNGIVGAQVPLG 155
Query: 205 TGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW 264
G AF KYR + C + A+FGDG+ N GQ +E NMAALWKLP++FV+ENN +
Sbjct: 156 AGLAFAHKYR----NDGGC---SAAYFGDGSANQGQVYEAYNMAALWKLPVIFVIENNGY 208
Query: 265 AIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECE 324
A+G S RA + + ++G FG+P VDGMDVL+VR A A++ + G+GP ++E +
Sbjct: 209 AMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVRGAATVAVDWVQAGKGPIILEMK 268
Query: 325 TYRFRGHSLADPDELR 340
TYR+RGHS++DP R
Sbjct: 269 TYRYRGHSMSDPARYR 284
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/260 (47%), Positives = 173/260 (66%), Gaps = 7/260 (2%)
Query: 85 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVS 144
+K++ L+ Y +M+L R FE+ Q+Y G + GF HLY GQEAV G LK+ D V++
Sbjct: 32 SKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQLALKEGDQVIT 91
Query: 145 TYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVA 204
YRDH H L+ G+ AR VM+EL G+ G +G+GGSMHMFSKE + GG +G + +
Sbjct: 92 GYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIVGAQVSLG 151
Query: 205 TGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW 264
TG AF ++YR D+V+LA+FGDG N GQ +E NMAALWKLP++++VENN +
Sbjct: 152 TGLAFANRYRGN-------DNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRY 204
Query: 265 AIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECE 324
A+G S RA++ ++G +FG+PG+ VDGMDV V+ A EA+E R G+GP ++E
Sbjct: 205 AMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEML 264
Query: 325 TYRFRGHSLADPDELRDPGE 344
TYR+RGHS++DP + R E
Sbjct: 265 TYRYRGHSMSDPAKYRSKDE 284
>sp|Q92IS3|ODPA_RICCN Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhA PE=3
SV=1
Length = 326
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 167/260 (64%), Gaps = 7/260 (2%)
Query: 85 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVS 144
TK+E ++ ++DM+L R FE+ C Q+Y G++ GF HLY GQEAV + + +K DS ++
Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAIDMVKQKGDSTIT 70
Query: 145 TYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVA 204
+YRDH H + G + V++EL G+ATGC +G+GGSMH+F+ + GG +G +P+
Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFNVPNKFYGGHGIVGAQVPIG 130
Query: 205 TGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW 264
TG AF KY D ++ F GDG N GQ +E NMAALW LP+V+++ENN +
Sbjct: 131 TGLAFVEKYN-------DTHNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEY 183
Query: 265 AIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECE 324
++G S R+T +YKKG +FG+ GF +DGMD ++ + +K+A E R P ++E +
Sbjct: 184 SMGTSVARSTFMRDLYKKGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVK 243
Query: 325 TYRFRGHSLADPDELRDPGE 344
TYR+RGHS++DP + R E
Sbjct: 244 TYRYRGHSMSDPAKYRSKEE 263
>sp|Q4UKQ6|ODPA_RICFE Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhA PE=3
SV=1
Length = 326
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 170/274 (62%), Gaps = 13/274 (4%)
Query: 71 VKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVST 130
+K KK K TK+E ++ ++DM+L R FE+ C Q+Y G++ GF HLY GQEAV +
Sbjct: 3 IKPKKYKP------TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVIS 56
Query: 131 GFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNL 190
+ +K DS +++YRDH H + G + V++EL G+ATGC +G+GGSMH+F +
Sbjct: 57 AVDTVKQKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKF 116
Query: 191 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAAL 250
GG +G +P+ TG AF KY +++ F GDG N GQ +E NMAAL
Sbjct: 117 YGGHGIVGAQVPIGTGLAFAEKYN-------GTNNICFTFLGDGAVNQGQVYEAFNMAAL 169
Query: 251 WKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIE 310
W LP+V+++ENN +++G S R+T +YKKG +FG+ GF +DGMD ++ AK+A E
Sbjct: 170 WGLPVVYIIENNEYSMGTSVARSTFMRDLYKKGESFGIKGFQLDGMDFEEMYNGAKQAAE 229
Query: 311 RARRGEGPTLVECETYRFRGHSLADPDELRDPGE 344
R P ++E +TYR+RGHS++DP + R E
Sbjct: 230 YVRENSFPLILEVKTYRYRGHSMSDPAKYRSKEE 263
>sp|Q1RJX4|ODPA_RICBR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
bellii (strain RML369-C) GN=pdhA PE=3 SV=1
Length = 326
Score = 239 bits (610), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 166/260 (63%), Gaps = 7/260 (2%)
Query: 85 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVS 144
K+E ++ ++DM+L R FE+ C Q+Y G++ GF HLY GQEAV + + +KEDS+V+
Sbjct: 11 VKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVDMVKQKEDSMVT 70
Query: 145 TYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVA 204
+YRDH H + G + V++EL G+ATGC +G+GGSMH+F + GG +G +P+
Sbjct: 71 SYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDVPNKFYGGHGIVGAQVPIG 130
Query: 205 TGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW 264
TG AF KY +++ F GDG N GQ +E NMAALW LP+V+++ENN +
Sbjct: 131 TGLAFAEKYN-------GTNNICFTFLGDGAVNQGQVYEAFNMAALWGLPVVYIIENNEY 183
Query: 265 AIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECE 324
++G S R+T +YKKG +FG+ GF ++GMD ++ + K+A E R P ++E +
Sbjct: 184 SMGTSVARSTFMRDLYKKGESFGIKGFQLNGMDFEEMYDGVKQAAEYVRENSMPLILEVK 243
Query: 325 TYRFRGHSLADPDELRDPGE 344
TYR+RGHS++DP + R E
Sbjct: 244 TYRYRGHSMSDPAKYRSKEE 263
>sp|Q9ZDR4|ODPA_RICPR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhA PE=3 SV=1
Length = 326
Score = 238 bits (608), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 168/274 (61%), Gaps = 13/274 (4%)
Query: 71 VKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVST 130
+K +K K I K+E ++ ++DM+L R FE+ C Q+Y GK+ GF HLY GQEAV +
Sbjct: 3 IKPEKYKPI------KEEYIKSFKDMLLLRRFEEKCGQLYGMGKIGGFCHLYIGQEAVIS 56
Query: 131 GFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNL 190
+ KK DS +++YRDH H + G + V++EL G+ATGC +G+GGSMH+F +
Sbjct: 57 AVAMIKKKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKF 116
Query: 191 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAAL 250
GG +G +P+ TG AF KY +++ F GDG N GQ +E NMA+L
Sbjct: 117 YGGHGIVGAQVPIGTGLAFAEKYN-------GTNNICFTFLGDGAVNQGQVYEAFNMASL 169
Query: 251 WKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIE 310
W LPIV+++ENN +++G S R+T +YKKG +FG+ GF +DGMD ++ K+ E
Sbjct: 170 WGLPIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAE 229
Query: 311 RARRGEGPTLVECETYRFRGHSLADPDELRDPGE 344
R P ++E +TYR+RGHS++DP + R E
Sbjct: 230 YVRENSFPVILEVKTYRYRGHSMSDPAKYRSKEE 263
>sp|Q68XA9|ODPA_RICTY Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhA PE=3
SV=1
Length = 326
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 161/258 (62%), Gaps = 7/258 (2%)
Query: 87 QEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTY 146
+E ++ ++DM+L R FE+ C Q+Y G++ GF HLY GQEAV + + KK DS +++Y
Sbjct: 13 EEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAVELIKKKGDSTITSY 72
Query: 147 RDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATG 206
RDH H + G + V++EL G+ATGC +G+GGSMH+F + GG +G +P+ TG
Sbjct: 73 RDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTG 132
Query: 207 AAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI 266
AF KY +++ F GDG N GQ +E NMA+LW LP+V+++ENN +++
Sbjct: 133 LAFAEKYN-------GTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPVVYIIENNEYSM 185
Query: 267 GMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 326
G S R+T +YKKG +FG+ GF +DGMD ++ K+ E R P ++E +TY
Sbjct: 186 GTSVSRSTFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTY 245
Query: 327 RFRGHSLADPDELRDPGE 344
R+RGHS++DP + R E
Sbjct: 246 RYRGHSMSDPAKYRSKEE 263
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 224 bits (571), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 162/265 (61%), Gaps = 7/265 (2%)
Query: 82 LLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDS 141
L +T+++ L +Y+ M+ R FED +++ +G + GFVHLY G+EAV+ G L DS
Sbjct: 9 LSLTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDS 68
Query: 142 VVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGI 201
+ ST+R H H ++KG +M+E+FGKATG C+G+GGSMH+ + +LG +G G
Sbjct: 69 ITSTHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGF 128
Query: 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVEN 261
+A G+A T+KY++ +V++ FFGDG N G F E LN+AA+W LP+VFV EN
Sbjct: 129 TLACGSALTAKYKQ-------TKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAEN 181
Query: 262 NLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLV 321
N + A++ I + A+ MPG VDG D+L V + A+EAIERAR G GP+L+
Sbjct: 182 NGYGEATPFEYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLI 241
Query: 322 ECETYRFRGHSLADPDELRDPGEHL 346
EC TYR GH D + E +
Sbjct: 242 ECMTYRNYGHFEGDAQTYKTKDERV 266
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 219 bits (558), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 157/282 (55%), Gaps = 24/282 (8%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
+ K E + + +M R E +C +Y + + GF HLY GQEAV G + K+D +
Sbjct: 46 VTNKDELISFFTEMSRFRRLETVCDGLYKKKLIRGFCHLYTGQEAVCAGLESAITKDDHI 105
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YRDH + LS+G + +EL K TGC +G+GGSMHMF+K N GG +G P
Sbjct: 106 ITAYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGIVGAQCP 163
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G AF KY + +V LA +GDG N GQ FE NMA+LWKLP++F+ ENN
Sbjct: 164 LGAGIAFAQKYNK-------TGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENN 216
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S R+T+ Y +G + G VDGMDV V+E K A E R G GP ++E
Sbjct: 217 KYGMGTSQKRSTAGHDFYTRGHY--VAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILE 274
Query: 323 CETYRFRGHSLADPD-------------ELRDPGEHLVLVLF 351
+TYR+ GHS++DP + RDP E++ ++
Sbjct: 275 MDTYRYVGHSMSDPGITYRTREEVNHVRQTRDPIENIRQIIL 316
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 218 bits (555), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 160/280 (57%), Gaps = 25/280 (8%)
Query: 81 NLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKE 139
++ T E L + DM + R E + A Y+ K+ GF HLY+GQEAV+ G + +
Sbjct: 52 DVTTTPAELLTFFRDMSVMRRME-IAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRS 110
Query: 140 DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGE 199
DS+++ YRDH L++G + +EL G+ GC RG+GGSMH + K+ N GG +G
Sbjct: 111 DSIITAYRDHCTYLARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGA 170
Query: 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 259
+P+ G AF KYR+E + T A +GDG N GQ FE LN++ALWKLP + V
Sbjct: 171 QVPLGCGLAFAQKYRKE-------ETATFALYGDGAANQGQLFEALNISALWKLPAILVC 223
Query: 260 ENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319
ENN + +G + RA P YK+G +PG VDGMDVL V++ K A E A GP
Sbjct: 224 ENNHYGMGTAEWRAAKSPAYYKRGDY--VPGLKVDGMDVLAVKQACKFAKEHA-IANGPI 280
Query: 320 LVECETYRFRGHSLADP-------DEL------RDPGEHL 346
++E +TYR+ GHS++DP DE+ RDP E +
Sbjct: 281 VLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERV 320
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 218 bits (554), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 152/257 (59%), Gaps = 11/257 (4%)
Query: 80 SNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE 139
+ ++T++EGL+ Y+ M R E Q+Y + + GF HLY+GQEA G +
Sbjct: 25 TTAVLTREEGLKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPT 84
Query: 140 DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGE 199
D V++ YR H ++G+P R +++EL G+ GC +G+GGSMHM++K N GG +G
Sbjct: 85 DHVITAYRAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGA 142
Query: 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 259
+P+ G A KY + D + L +GDG N GQ FE NMAALWKLP +F+
Sbjct: 143 QVPLGVGIALACKYNEK-------DEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFIC 195
Query: 260 ENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319
ENN + +G S RA + YK+G +PG VDGMDVL VRE K A R G+GP
Sbjct: 196 ENNRYGMGTSVERAAASTDYYKRGDF--IPGIMVDGMDVLCVREATKFAAAYCRSGKGPM 253
Query: 320 LVECETYRFRGHSLADP 336
L+E +TYR+ GHS++DP
Sbjct: 254 LMELQTYRYHGHSMSDP 270
>sp|Q654V6|ODPA2_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os06g0246500 PE=2
SV=1
Length = 398
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 161/281 (57%), Gaps = 25/281 (8%)
Query: 85 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVV 143
T +E + DM R E + A Y+ K+ GF HLY+GQEAV+ G + D+++
Sbjct: 64 TARELATFFRDMSAMRRAE-IAADSLYKAKLIRGFCHLYDGQEAVAVGMEAATTRADAII 122
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
+ YRDH L++G A+ +EL G+ GC RG+GGSMH++ K+ N GG +G +P+
Sbjct: 123 TAYRDHCAYLARGGDLAALFAELMGRRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVPL 182
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
G AF +YR+E VT +GDG N GQ FE LNMAALWKLP+V V ENN
Sbjct: 183 GCGLAFAQRYRKEAA-------VTFDLYGDGAANQGQLFEALNMAALWKLPVVLVCENNH 235
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+ +G + RA+ P YK+G +PG VDGMDVL V++ K A + A GP ++E
Sbjct: 236 YGMGTAEWRASKSPAYYKRGDY--VPGLKVDGMDVLAVKQACKFAKQHALE-NGPIILEM 292
Query: 324 ETYRFRGHSLADP-------DEL------RDPGEHLVLVLF 351
+TYR+ GHS++DP DE+ RDP E + +L
Sbjct: 293 DTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPIERVRKLLL 333
>sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1
Length = 388
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 150/254 (59%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+ EGL+ Y M+ R E Q+Y + + GF HL +GQEA G + D V
Sbjct: 53 VLTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHV 112
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
+++YR H ++G+ R++++EL G+ GC +G+GGSMHM++K N GG +G P
Sbjct: 113 ITSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGP 170
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY+ D + L +GDG N GQ E NMAALWKLP VF+ ENN
Sbjct: 171 LGAGIALACKYKGN-------DEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENN 223
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
L+ +G S RA + P YK+G +PG VDGMDVL VRE K A R G+GP L+E
Sbjct: 224 LYGMGTSTERAAASPDYYKRGNF--IPGLKVDGMDVLCVREATKFAANYCRSGKGPILME 281
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 282 LQTYRYHGHSMSDP 295
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 214 bits (545), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 150/254 (59%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 55 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 114
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G+P RA+++EL G+ GC +G+GGSMHM++K N GG +G +P
Sbjct: 115 ITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG N GQ FE NMAALWKLP +F+ ENN
Sbjct: 173 LGAGIALACKYNGK-------DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE K A R G+GP L+E
Sbjct: 226 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILME 283
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 284 LQTYRYHGHSMSDP 297
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 179/334 (53%), Gaps = 36/334 (10%)
Query: 27 NSLFDPLKTGTSFLGSTRKLRVNSVHSNQGNVRRRLPVVAVSEVVKEKKVKSISNLLITK 86
N + PL ++ + +TR+L +S + V LP + + + V++ L+T
Sbjct: 10 NHIMKPL---SAAVCATRRLSSDSTATI--TVETSLPFTSHNIDPPSRSVETSPKELMT- 63
Query: 87 QEGLELYEDMILGRSFEDMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVVST 145
++DM R E + A Y+ K+ GF HLY+GQEAV+ G + K+D +++
Sbjct: 64 -----FFKDMTEMRRME-IAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITKKDCIITA 117
Query: 146 YRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVAT 205
YRDH L +G +EL G+ GC RG+GGSMH + KE GG +G +P+
Sbjct: 118 YRDHCIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGI 177
Query: 206 GAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA 265
G AF KY++E D+VT A +GDG N GQ FE LNMAALW LP + V ENN +
Sbjct: 178 GLAFAQKYKKE-------DYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYG 230
Query: 266 IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECET 325
+G + RA P YK+G +PG VDGMDV V++ A + A + GP ++E +T
Sbjct: 231 MGTAEWRAAKSPAYYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHALK-NGPIILEMDT 287
Query: 326 YRFRGHSLADP-------DEL------RDPGEHL 346
YR+ GHS++DP DE+ RDP E +
Sbjct: 288 YRYHGHSMSDPGSTYRTRDEISGVRQERDPVERI 321
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 211 bits (538), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 175/337 (51%), Gaps = 39/337 (11%)
Query: 24 SRDNSLFDPLKTGTSFLGSTRKLRVNSVHSNQGNVRRRLPVVAVSEVVKEKKVKSISNLL 83
SR N + P S L ST + + LP A + V+S S
Sbjct: 8 SRSNIITRPFSAAFSRLISTDTTPIT--------IETSLPFTAHLCDPPSRSVESSS--- 56
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSV 142
QE L+ + M L R E + A Y+ K+ GF HLY+GQEAV+ G + K+D++
Sbjct: 57 ---QELLDFFRTMALMRRME-IAADSLYKAKLIRGFCHLYDGQEAVAIGMEAAITKKDAI 112
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YRDH L +G V SEL G+ GC +G+GGSMH + KE + GG +G +P
Sbjct: 113 ITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G AF KY +E + VT A +GDG N GQ FE LN++ALW LP + V ENN
Sbjct: 173 LGCGIAFAQKYNKE-------EAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G + RA P YK+G +PG VDGMD V++ K A + A +GP ++E
Sbjct: 226 HYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHALE-KGPIILE 282
Query: 323 CETYRFRGHSLADP-------DEL------RDPGEHL 346
+TYR+ GHS++DP DE+ RDP E +
Sbjct: 283 MDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERI 319
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 148/254 (58%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 55 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 114
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G RA+++EL G+ GC +G+GGSMHM++K N GG +G +P
Sbjct: 115 ITAYRAHGFTFNRGHAVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG N GQ FE NMAALWKLP +F+ ENN
Sbjct: 173 LGAGIALACKYNGK-------DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE K A R G+GP L+E
Sbjct: 226 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILME 283
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 284 LQTYRYHGHSMSDP 297
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 148/254 (58%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 55 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 114
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G+ R +++EL G+ GC +G+GGSMHM++K N GG +G +P
Sbjct: 115 ITAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG N GQ FE NMAALWKLP +F+ ENN
Sbjct: 173 LGAGIALACKYNGK-------DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE K A R G+GP L+E
Sbjct: 226 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILME 283
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 284 LQTYRYHGHSMSDP 297
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 205 bits (521), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 159/281 (56%), Gaps = 25/281 (8%)
Query: 85 TKQEGLELYEDMILGRSFEDMCAQMYYRGKMF-GFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+ +E L + DM R E + A Y+ K+ GF HLY+GQEA++ G + K+D+++
Sbjct: 59 SSEEILAFFRDMARMRRME-IAADSLYKAKLIRGFCHLYDGQEALAVGMEAAITKKDAII 117
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
++YRDH + +G SEL G+ TGC G+GGSMH + K+ + GG +G IP+
Sbjct: 118 TSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPL 177
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
G AF KY ++ + VT A +GDG N GQ FE LN++ALW LP + V ENN
Sbjct: 178 GCGLAFAQKYNKD-------EAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNH 230
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+ +G + R+ P +K+G +PG VDGMD L V++ K A E A + GP ++E
Sbjct: 231 YGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALKN-GPIILEM 287
Query: 324 ETYRFRGHSLADP-------DEL------RDPGEHLVLVLF 351
+TYR+ GHS++DP DE+ RDP E + +L
Sbjct: 288 DTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLL 328
>sp|P27745|ACOA_CUPNH Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=acoA PE=1 SV=3
Length = 333
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 143/263 (54%), Gaps = 7/263 (2%)
Query: 82 LLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDS 141
L + K+ L +Y M R FE+ + RG + GFVHLY G+EA G + L D
Sbjct: 12 LPLDKETLLTVYRKMRTIRDFEERLHVDFGRGDIPGFVHLYAGEEAAGVGILHHLNDGDR 71
Query: 142 VVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGI 201
+ ST+R H H ++KGV A+M E++GK G C G+GGSMH+ ++G +G G
Sbjct: 72 IASTHRGHGHCIAKGVDPVAMMKEIYGKKGGSCNGKGGSMHIADLSKGMMGANGILGAGA 131
Query: 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVEN 261
P+ GAA +K+R + V + F GDG N G F E LN+AA+W LP++FV+EN
Sbjct: 132 PLICGAALAAKFRGK-------GEVGITFCGDGASNQGTFLESLNLAAVWNLPVIFVIEN 184
Query: 262 NLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLV 321
N +A S T+ + FG+PG VDG D V E A E I RAR G GP+L+
Sbjct: 185 NGYAESTSRDYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLL 244
Query: 322 ECETYRFRGHSLADPDELRDPGE 344
EC+ RF GH D R GE
Sbjct: 245 ECKMVRFYGHFEGDAQTYRAAGE 267
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 201 bits (510), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 146/256 (57%), Gaps = 11/256 (4%)
Query: 81 NLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKED 140
N+ +TK++ L Y M R E +Y K+ GF HLY+GQEA + G ++ D
Sbjct: 44 NMHVTKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYSGQEACAVGMKAAMEPGD 103
Query: 141 SVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEG 200
+ ++ YR H G P V+ EL G+ TG G+GGSMHM+ + N GG +G
Sbjct: 104 AAITAYRCHGWTYLSGSPVAKVLCELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQ 161
Query: 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVE 260
P+ TG AF KY+++ +V + FGDG N GQ +E +NMA LW+LP+++V E
Sbjct: 162 QPLGTGIAFAMKYKKQ-------KNVCITLFGDGATNQGQLYESMNMAKLWELPVLYVCE 214
Query: 261 NNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTL 320
NN + +G S R+++ Y +G +PGF VDGMDVL VR+ + E G+GP +
Sbjct: 215 NNGYGMGTSAARSSASTDYYTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLM 272
Query: 321 VECETYRFRGHSLADP 336
+E TYR+ GHS++DP
Sbjct: 273 IEMATYRYGGHSMSDP 288
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 11/256 (4%)
Query: 81 NLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKED 140
N+ +TK++ + Y M+ R E +Y K+ GF HLY+GQEA + G + D
Sbjct: 49 NVHVTKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLYSGQEACAVGTKAAMDAGD 108
Query: 141 SVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEG 200
+ V+ YR H G V+ EL G+ TG G+GGSMHM+ + N GG +G
Sbjct: 109 AAVTAYRCHGWTYLSGSSVAKVLCELTGRITGNVYGKGGSMHMYGE--NFYGGNGIVGAQ 166
Query: 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVE 260
P+ TG AF KYR+E +V + FGDG N GQ FE +NMA LW LP+++V E
Sbjct: 167 QPLGTGIAFAMKYRKE-------KNVCITMFGDGATNQGQLFESMNMAKLWDLPVLYVCE 219
Query: 261 NNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTL 320
NN + +G + R+++ Y +G +PG VDGMDVL VR+ + A E G+GP +
Sbjct: 220 NNGYGMGTAAARSSASTDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGKGPLM 277
Query: 321 VECETYRFRGHSLADP 336
+E TYR+ GHS++DP
Sbjct: 278 IEMATYRYSGHSMSDP 293
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 154/284 (54%), Gaps = 23/284 (8%)
Query: 81 NLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKED 140
++ + E L + M L R E +Y + GF HLY+GQEAV+ G K+D
Sbjct: 59 SVTTSPSELLSFFRTMALMRRMEIAADSLYKANLIRGFCHLYDGQEAVAVGMEAGTTKKD 118
Query: 141 SVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEG 200
+++ YRDH L +G V +EL G+ GC +G+GGSMH + K+ GG +G
Sbjct: 119 CIITAYRDHCTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQ 178
Query: 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVE 260
+P+ G AF KY ++ + VT A +GDG N GQ FE LN++ALW LP + V E
Sbjct: 179 VPLGCGLAFGQKYLKD-------ESVTFALYGDGAANQGQLFEALNISALWDLPAILVCE 231
Query: 261 NNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTL 320
NN + +G + R+ P +K+G +PG VDGMD L V++ K A E A + GP +
Sbjct: 232 NNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPII 288
Query: 321 VECETYRFRGHSLADP-------DEL------RDPGEHLVLVLF 351
+E +TYR+ GHS++DP DE+ RDP E + +L
Sbjct: 289 LEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLL 332
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 153/281 (54%), Gaps = 16/281 (5%)
Query: 61 RLPVVAVSEVVKEKKVKSISN-----LLITKQEGLELYEDMILGRSFEDMCAQMYYRGKM 115
RL VS K K+ + N + + +++ L+ Y DM + R E +Y K+
Sbjct: 22 RLASTEVSFHTKPCKLHKLDNGPNTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKI 81
Query: 116 FGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCR 175
GF HLY+GQEA + G + + D+V++ YR H G V++EL G+ G
Sbjct: 82 RGFCHLYSGQEACAVGMKAAMTEGDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGNVH 141
Query: 176 GQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGT 235
G+GGSMHM++K N GG +G P+ G A KYR + +V + +GDG
Sbjct: 142 GKGGSMHMYTK--NFYGGNGIVGAQQPLGAGVALAMKYREQ-------KNVCVTLYGDGA 192
Query: 236 CNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295
N GQ FE NMA LW LP++FV ENN + +G + R+++ + Y +G +PG VDG
Sbjct: 193 ANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDY--VPGIWVDG 250
Query: 296 MDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP 336
MD+L VRE K A E G+GP ++E TYR+ GHS++DP
Sbjct: 251 MDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDP 291
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 177/338 (52%), Gaps = 43/338 (12%)
Query: 33 LKTGTSFLGSTRKLRVNSVHSNQGNVRRRLPVVAVSEVVKEKKV------------KSIS 80
LK +S +G + LR+ V + NVR A+S+V E K S
Sbjct: 4 LKAQSSVVGKSSSLRL--VRNFSKNVR------ALSQVADETKPGDDDLVQIDLPETSFE 55
Query: 81 NLLI---------TKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTG 131
L+ TK L++Y+DMI+ R E C +Y K+ GF H GQEA++ G
Sbjct: 56 GYLLDVPELSYQTTKSNLLQMYKDMIIVRRMEMACDALYKAKKIRGFCHSSVGQEAIAVG 115
Query: 132 FIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLL 191
+ K D+V+++YR H +G +AV++EL G+ TG G+GGSMH+++
Sbjct: 116 IENAITKRDTVITSYRCHGFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMHLYAP--GFY 173
Query: 192 GGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALW 251
GG +G +P+ G AF +Y+ E D + A +GDG N GQ FE NMA LW
Sbjct: 174 GGNGIVGAQVPLGAGLAFAHQYKHE-------DACSFALYGDGASNQGQVFESFNMAKLW 226
Query: 252 KLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIER 311
LP VF ENN + +G + R+++ + +K+G +PG V+GMD+L V + +K A +
Sbjct: 227 NLPAVFCCENNKYGMGTAAARSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDW 284
Query: 312 ARRGEGPTLVECETYRFRGHSLADPD---ELRDPGEHL 346
G GP ++E ETYR+ GHS++DP RD +H+
Sbjct: 285 TVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHM 322
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 194 bits (494), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 160/291 (54%), Gaps = 13/291 (4%)
Query: 47 RVNSVHSNQGNVRRRLPVVAVSEVVKEKKVKSISNLL-ITKQEGLELYEDMILGRSFEDM 105
R N H + + + PV V + K+ S + +TK E L LYE M+ R E
Sbjct: 36 RANPAHVPEEH-DKPFPVKLDDSVFEGYKIDVPSTEIEVTKGELLGLYEKMVTIRRLELA 94
Query: 106 CAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSE 165
C +Y K+ GF HL GQEAV+ G + +DS++++YR H A ++G+ R+++ E
Sbjct: 95 CDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGE 154
Query: 166 LFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225
L G+ G +G+GGSMH+F+K N GG +G IP+ G F KY +
Sbjct: 155 LMGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQIPLGAGIGFAQKYLEK-------PT 205
Query: 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPA 285
T A +GDG N GQ FE NMA LW LP++F ENN + +G S R+++ + YK+G
Sbjct: 206 TTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAERSSAMTEFYKRGQY 265
Query: 286 FGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP 336
+PG V+GMDVL V + +K A + P L+E TYR+ GHS++DP
Sbjct: 266 --IPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDP 314
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 194 bits (493), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 151/260 (58%), Gaps = 14/260 (5%)
Query: 90 LELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDH 149
L++Y+DM++ R E C +Y K+ GF HL GQEA++ G + K DS++++YR H
Sbjct: 82 LQMYKDMVIIRRMEMACDALYKAKKIRGFCHLSVGQEAIAVGIENAITKLDSIITSYRCH 141
Query: 150 VHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAF 209
+G +AV++EL G+ G G+GGSMH+++ GG +G +P+ G AF
Sbjct: 142 GFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAP--GFYGGNGIVGAQVPLGAGLAF 199
Query: 210 TSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMS 269
+Y+ E D + +GDG N GQ FE NMA LW LP+VF ENN + +G +
Sbjct: 200 AHQYKNE-------DACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCENNKYGMGTA 252
Query: 270 HLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 329
R+++ + +K+G +PG V+GMD+L V + +K A + G+GP ++E ETYR+
Sbjct: 253 ASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYG 310
Query: 330 GHSLADPD---ELRDPGEHL 346
GHS++DP RD +H+
Sbjct: 311 GHSMSDPGTTYRTRDEIQHM 330
>sp|P35487|ODPAT_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1
Length = 391
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 155/257 (60%), Gaps = 11/257 (4%)
Query: 80 SNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE 139
++ ++T+ E L+ Y M + R E Q+Y + + GF HL +GQEA G +
Sbjct: 53 TSTVLTRAEALKYYRTMQVIRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPT 112
Query: 140 DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGE 199
D V+++YR H ++G+ +++++EL G+ GC +G+GGSMHM+ K N GG +G
Sbjct: 113 DHVITSYRAHGFCYTRGLSVKSILAELTGRKGGCAKGKGGSMHMYGK--NFYGGNGIVGA 170
Query: 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 259
+P+ G AF KY + V LA +GDG N GQ FE NM+ALWKLP VF+
Sbjct: 171 QVPLGAGVAFACKYLKN-------GQVCLALYGDGAANQGQVFEAYNMSALWKLPCVFIC 223
Query: 260 ENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319
ENNL+ +G S+ R+ + +KKG F +PG V+GMD+L VRE K A + R G+GP
Sbjct: 224 ENNLYGMGTSNERSAASTDYHKKG--FIIPGLRVNGMDILCVREATKFAADHCRSGKGPI 281
Query: 320 LVECETYRFRGHSLADP 336
++E +TYR+ GHS++DP
Sbjct: 282 VMELQTYRYHGHSMSDP 298
>sp|Q06437|ODPAT_RAT Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=1
SV=1
Length = 391
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 156/257 (60%), Gaps = 11/257 (4%)
Query: 80 SNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE 139
++ ++T++E L+ Y +M + R E Q+Y + + GF HL +GQEA + G +
Sbjct: 53 TSTVLTREEALKYYRNMQVIRRMELKADQLYKQKFIRGFCHLCDGQEACNVGLEAGINPT 112
Query: 140 DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGE 199
D ++++YR H ++G+ +++++EL G+ GC +G+GGSMHM++K N GG +G
Sbjct: 113 DHIITSYRAHGLCYTRGLSVKSILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGA 170
Query: 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 259
+P+ G A KY + + LA +GDG N GQ FE NM+ALWKLP VF+
Sbjct: 171 QVPLGAGVALACKYLKN-------GQICLALYGDGAANQGQVFEAYNMSALWKLPCVFIC 223
Query: 260 ENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319
ENN + +G + R+ + +KKG F +PG V+GMD+L VRE K A + R G+GP
Sbjct: 224 ENNRYGMGTAIERSAASTDYHKKG--FVIPGLRVNGMDILSVREATKFAADHCRSGKGPI 281
Query: 320 LVECETYRFRGHSLADP 336
++E +TYR+ GHS++DP
Sbjct: 282 VMELQTYRYHGHSMSDP 298
>sp|P29804|ODPA_PIG Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial (Fragment) OS=Sus scrofa GN=PDHA1 PE=1
SV=1
Length = 389
Score = 187 bits (476), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 148/254 (58%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 54 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 113
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G+ R +++EL G+ GC +G+GGSMHM++K N GG +G +P
Sbjct: 114 ITAYRAHGFTFTRGLSVREILAELTGRRGGCGKGKGGSMHMYAK--NFYGGNGIVGAQVP 171
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG N GQ FE NMAALWKLP VF+ ENN
Sbjct: 172 LGAGIALACKYNGK-------DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCVFICENN 224
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE + A R G+GP L+E
Sbjct: 225 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 282
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 283 LQTYRYHGHSMSDP 296
>sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3
Length = 390
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 148/254 (58%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 55 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 114
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G+ R +++EL G+ GC +G+GGSMHM++K N GG +G +P
Sbjct: 115 ITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG N GQ FE NMAALWKLP +F+ ENN
Sbjct: 173 LGAGIALACKYNGK-------DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE + A R G+GP L+E
Sbjct: 226 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 284 LQTYRYHGHSMSDP 297
>sp|Q5R490|ODPA_PONAB Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1
Length = 390
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 147/254 (57%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 55 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 114
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G+ R +++EL G+ GC +G+GGSMHM++K N GG +G +P
Sbjct: 115 ITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG N GQ F NMAALWKLP +F+ ENN
Sbjct: 173 LGAGIALACKYNGK-------DEVCLTLYGDGAANQGQIFGAYNMAALWKLPCIFICENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE + A R G+GP L+E
Sbjct: 226 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 284 LQTYRYHGHSMSDP 297
>sp|A5A6L0|ODPA_PANTR Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pan troglodytes GN=PDHA1 PE=2 SV=1
Length = 390
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 147/254 (57%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 55 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 114
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G+ R +++EL G+ GC +G+GGSMHM++K N GG +G +P
Sbjct: 115 ITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG N GQ FE NMAALWKLP +F+ ENN
Sbjct: 173 LGAGIALACKYNGK-------DEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE + A R G+GP L+E
Sbjct: 226 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++ P
Sbjct: 284 LQTYRYHGHSMSGP 297
>sp|Q8HXW9|ODPA_MACFA Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Macaca fascicularis GN=PDHA1 PE=2 SV=1
Length = 390
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 146/254 (57%), Gaps = 11/254 (4%)
Query: 83 LITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSV 142
++T+++GL+ Y M R E Q+Y + + GF HL +GQEA G + D +
Sbjct: 55 VLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHL 114
Query: 143 VSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIP 202
++ YR H ++G+ R +++EL G+ GC +G+GGS HM++K N G +G +P
Sbjct: 115 ITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSTHMYAK--NFYRGNGIVGAQVP 172
Query: 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN 262
+ G A KY + D V L +GDG + GQ FE NMAALWKLP +F+ ENN
Sbjct: 173 LGAGIALACKYNGK-------DEVCLTLYGDGAADQGQIFEAYNMAALWKLPCIFICENN 225
Query: 263 LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 322
+ +G S RA + YK+G +PG VDGMD+L VRE + A R G+GP L+E
Sbjct: 226 RYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILME 283
Query: 323 CETYRFRGHSLADP 336
+TYR+ GHS++DP
Sbjct: 284 LQTYRYHGHSMSDP 297
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 127/258 (49%), Gaps = 9/258 (3%)
Query: 92 LYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE-DSVVSTYRDHV 150
LY DM+ R ++ + GK F+ G EA ++ D V YRDH
Sbjct: 41 LYRDMLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHG 99
Query: 151 HALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFT 210
AL+ G+P + ++ ++ +G+ H SK N + I +P A GAA +
Sbjct: 100 LALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAIS 159
Query: 211 SKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSH 270
K R V + FGDG + G ++ +N AA+ P VF+ ENN +AI + +
Sbjct: 160 MKLLR-------TGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDY 212
Query: 271 LRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 330
T P I K AFG+PG+ VDGMDVL V KEA+ERARRGEGP+LVE YR+
Sbjct: 213 RHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGP 272
Query: 331 HSLADPDELRDPGEHLVL 348
HS AD D P E +
Sbjct: 273 HSSADDDSRYRPKEEVAF 290
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 126/258 (48%), Gaps = 9/258 (3%)
Query: 92 LYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE-DSVVSTYRDHV 150
LY DM+ R ++ + GK F+ G EA ++ D V YRDH
Sbjct: 41 LYRDMLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHG 99
Query: 151 HALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFT 210
AL+ G+P + + ++ +G+ H SK N + I +P A GAA +
Sbjct: 100 LALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAIS 159
Query: 211 SKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSH 270
K R V + FGDG + G ++ +N AA+ P VFV ENN +AI + +
Sbjct: 160 MKLLR-------TGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDY 212
Query: 271 LRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 330
T P I K AFG+PG+ VDGMDVL V KEA+ERARRGEGP+LVE YR+
Sbjct: 213 RHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGP 272
Query: 331 HSLADPDELRDPGEHLVL 348
HS AD D P E +
Sbjct: 273 HSSADDDSRYRPKEEVAF 290
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 132/253 (52%), Gaps = 12/253 (4%)
Query: 82 LLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE-D 140
L +T QE +++Y M+L R ++ + GK+ FV GQEA G L +E D
Sbjct: 9 LGLTDQEAVDMYRTMLLARKIDERMWLLNRSGKI-PFVISCQGQEAAQVGAAFALDREMD 67
Query: 141 SVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSM--HMFSKEHNLLGGFAFIG 198
V+ YRD L+ G+ A+ +M F KA G G M H K++ ++ G + +
Sbjct: 68 YVLPYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSG-GRQMPGHFGQKKNRIVTGSSPVT 126
Query: 199 EGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFV 258
+P A G A + ++ D FG+G+ N G F E N AA+ KLP++F+
Sbjct: 127 TQVPHAVGIALAGRMEKK-------DIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFM 179
Query: 259 VENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGP 318
ENN +AI + + + + I + +GMPG V+G D L+V + KEA ERARRGEGP
Sbjct: 180 CENNKYAISVPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGP 239
Query: 319 TLVECETYRFRGH 331
TL+E +YR H
Sbjct: 240 TLIETISYRLTPH 252
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+KED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P ++E F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
A G AF LK+ + V + + GDG + G F+E +N AA +K P +FV++NN
Sbjct: 153 AAGVAF-------ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K A G+PG VDGMD L V + KEA +RA GEGPTL+E
Sbjct: 206 YAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 MTYRYGPHTMAGDDPTR 282
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+KED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P ++E F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
A G AF LK+ + V + + GDG + G F+E +N AA +K P +FV++NN
Sbjct: 153 AAGVAF-------ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K A G+PG VDGMD L V + KEA +RA GEGPTL+E
Sbjct: 206 YAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 MTYRYGPHTMAGDDPTR 282
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+KED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P ++E F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
A G AF LK+ + V + + GDG + G F+E +N AA +K P +FV++NN
Sbjct: 153 AAGVAF-------ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K A G+PG VDGMD L V + KEA +RA GEGPTL+E
Sbjct: 206 YAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 MTYRYGPHTMAGDDPTR 282
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+KED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P ++E F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
A G AF LK+ + V + + GDG + G F+E +N AA +K P +FV++NN
Sbjct: 153 AAGVAF-------ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K A G+PG VDGMD L V + KEA +RA GEGPTL+E
Sbjct: 206 YAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 MTYRYGPHTMAGDDPTR 282
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+KED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P ++E F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
A G AF LK+ + V + + GDG + G F+E +N AA +K P +FV++NN
Sbjct: 153 AAGVAF-------ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K A G+PG VDGMD L V + KEA +RA GEGPTL+E
Sbjct: 206 YAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 MTYRYGPHTMAGDDPTR 282
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+KED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALEKEDYIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P ++E F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTEAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
G AF LK+ + V + + GDG + G F+E +N AA +K P +FV++NN
Sbjct: 153 TAGVAF-------ALKKRGKNAVAITYTGDGGSSQGDFYEGINFAAAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K A G+PG VDGMD L V + KEA +RA GEGPTL+E
Sbjct: 206 YAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 MTYRYGPHTMAGDDPTR 282
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 17/252 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+ K+ L++Y+ +LGR+ + Q +G+M + GQEA G ++ +D
Sbjct: 15 LPKETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAPNM-GQEAAQIGMAAAMEPQDWNS 73
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YR+ L +G V +G G + +G +L IG +
Sbjct: 74 PMYRELNTLLYRGDKLENVFLYWYGNERGSIKPEG---------VKILPTNIIIGSQSNI 124
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
A G A SK R+ + VT GDG +G+F+E LN AA +K P+V V++NN
Sbjct: 125 AAGLAMASKIRK-------TNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQ 177
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
WAI +A++ + +KG AFG+P VDG D+L + +KEA++RAR+G+GPTL+E
Sbjct: 178 WAISTPVRKASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEA 237
Query: 324 ETYRFRGHSLAD 335
TYR H+ +D
Sbjct: 238 FTYRMGPHTTSD 249
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+ ED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALESEDFIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P +++ F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTDAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
G AF LK+ + V + + GDG + G F+E +N A+ +K P +FV++NN
Sbjct: 153 TAGVAFG-------LKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K + G+PG VDGMD L V + EA ERA GEGPT++E
Sbjct: 206 YAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 LTYRYGPHTMAGDDPTR 282
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 17/257 (6%)
Query: 84 ITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVV 143
+T ++ +EL E M+ R + + +G++ GF GQEA L+ ED ++
Sbjct: 43 LTDEQLVELMERMVWTRILDQRSISLNRQGRL-GFYAPTAGQEASQLASQYALESEDFIL 101
Query: 144 STYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPV 203
YRD + G+P +++ F + G +G + F + N L IG
Sbjct: 102 PGYRDVPQIIWHGLP----LTDAFLFSRGHFKG-----NQFPEGVNALSPQIIIGAQYIQ 152
Query: 204 ATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL 263
G AF LK+ + V + + GDG + G F+E +N A+ +K P +FV++NN
Sbjct: 153 TAGVAFG-------LKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNN 205
Query: 264 WAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323
+AI + T+ + +K + G+PG VDGMD L V + EA ERA GEGPT++E
Sbjct: 206 YAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIET 265
Query: 324 ETYRFRGHSLADPDELR 340
TYR+ H++A D R
Sbjct: 266 LTYRYGPHTMAGDDPTR 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,088,577
Number of Sequences: 539616
Number of extensions: 5858782
Number of successful extensions: 12506
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 12260
Number of HSP's gapped (non-prelim): 270
length of query: 361
length of database: 191,569,459
effective HSP length: 119
effective length of query: 242
effective length of database: 127,355,155
effective search space: 30819947510
effective search space used: 30819947510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)