Query 018048
Match_columns 361
No_of_seqs 273 out of 2475
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:06:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018048.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018048hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qs0_A 2-oxoisovalerate dehydr 100.0 3.6E-58 1.2E-62 459.6 28.2 284 60-351 47-332 (407)
2 2bfd_A 2-oxoisovalerate dehydr 100.0 5.8E-58 2E-62 457.6 28.1 305 36-351 6-312 (400)
3 2ozl_A PDHE1-A type I, pyruvat 100.0 1.2E-57 4E-62 450.2 27.3 260 80-350 27-287 (365)
4 1w85_A Pyruvate dehydrogenase 100.0 9.3E-56 3.2E-60 437.3 25.8 272 63-351 19-293 (368)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 8E-52 2.7E-56 409.2 26.9 284 61-352 10-295 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 1.1E-46 3.8E-51 405.5 19.1 277 68-350 101-407 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 1.4E-45 4.8E-50 405.6 20.1 277 68-350 346-652 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 3.6E-45 1.2E-49 395.9 21.4 273 70-350 183-479 (933)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 7.3E-29 2.5E-33 260.1 16.0 226 82-334 21-291 (621)
10 2o1x_A 1-deoxy-D-xylulose-5-ph 99.9 2.7E-27 9.1E-32 248.6 13.5 222 82-332 23-294 (629)
11 1gpu_A Transketolase; transfer 99.9 2.8E-24 9.5E-29 227.4 18.9 163 188-354 109-281 (680)
12 2e6k_A Transketolase; structur 99.9 2.8E-24 9.6E-29 226.4 13.5 160 189-353 112-280 (651)
13 2r8o_A Transketolase 1, TK 1; 99.9 1.2E-23 4.3E-28 222.1 15.4 162 189-354 108-279 (669)
14 3mos_A Transketolase, TK; thia 99.9 1.5E-22 5.3E-27 211.9 19.5 148 192-351 118-271 (616)
15 1r9j_A Transketolase; domains, 99.9 3.9E-23 1.3E-27 218.3 15.0 160 189-352 110-279 (673)
16 1itz_A Transketolase; calvin c 99.9 3.7E-22 1.2E-26 211.1 19.0 160 189-352 121-291 (675)
17 3l84_A Transketolase; TKT, str 99.9 2.8E-22 9.6E-27 210.1 17.4 156 189-349 108-269 (632)
18 4feg_A Pyruvate oxidase; carba 99.9 5.3E-23 1.8E-27 214.7 10.3 169 156-343 370-566 (603)
19 3rim_A Transketolase, TK; TPP, 99.9 5.5E-22 1.9E-26 209.7 15.0 159 189-351 127-298 (700)
20 3uk1_A Transketolase; structur 99.9 5.4E-22 1.9E-26 210.2 13.6 157 189-350 149-315 (711)
21 3kom_A Transketolase; rossmann 99.9 1E-21 3.4E-26 207.0 14.9 156 190-350 111-277 (663)
22 2qtc_A Pyruvate dehydrogenase 99.9 2E-21 6.7E-26 209.9 17.4 260 88-352 76-424 (886)
23 3m49_A Transketolase; alpha-be 99.8 6.9E-21 2.4E-25 201.3 12.5 155 190-349 135-300 (690)
24 1v5e_A Pyruvate oxidase; oxido 99.8 6.9E-21 2.4E-25 198.3 9.6 157 157-329 364-541 (590)
25 1ozh_A ALS, acetolactate synth 99.8 6.3E-21 2.1E-25 197.6 7.1 153 157-328 371-544 (566)
26 3eya_A Pyruvate dehydrogenase 99.8 1.3E-20 4.6E-25 194.4 9.5 155 156-329 356-531 (549)
27 2pan_A Glyoxylate carboligase; 99.8 8.8E-21 3E-25 198.3 7.9 158 157-329 393-582 (616)
28 1q6z_A BFD, BFDC, benzoylforma 99.8 9.7E-21 3.3E-25 194.4 6.8 153 156-328 352-526 (528)
29 1t9b_A Acetolactate synthase, 99.8 1.4E-20 4.8E-25 199.1 8.1 156 156-330 460-640 (677)
30 1ybh_A Acetolactate synthase, 99.8 1.4E-20 4.8E-25 195.8 7.8 157 156-331 376-562 (590)
31 2pgn_A Cyclohexane-1,2-dione h 99.8 1.9E-20 6.5E-25 194.8 8.4 157 156-331 374-551 (589)
32 2iht_A Carboxyethylarginine sy 99.8 2E-20 6.8E-25 194.0 6.7 153 156-327 381-561 (573)
33 2uz1_A Benzaldehyde lyase; thi 99.8 2.8E-20 9.5E-25 192.5 7.0 155 156-327 369-546 (563)
34 1ovm_A Indole-3-pyruvate decar 99.8 4.9E-20 1.7E-24 190.0 7.8 152 157-327 360-532 (552)
35 2vbf_A Branched-chain alpha-ke 99.8 5.8E-20 2E-24 190.3 7.0 154 156-328 376-552 (570)
36 2c31_A Oxalyl-COA decarboxylas 99.8 9.3E-20 3.2E-24 188.7 7.7 152 157-329 375-549 (568)
37 2nxw_A Phenyl-3-pyruvate decar 99.8 4.3E-20 1.5E-24 191.3 4.9 154 156-328 373-543 (565)
38 2vk8_A Pyruvate decarboxylase 99.8 6.7E-20 2.3E-24 189.5 6.2 158 156-328 364-543 (563)
39 2vbi_A Pyruvate decarboxylase; 99.8 6.5E-20 2.2E-24 189.8 5.5 154 156-328 360-534 (566)
40 2wvg_A PDC, pyruvate decarboxy 99.8 1.4E-19 4.8E-24 187.4 6.7 154 156-328 364-542 (568)
41 2q28_A Oxalyl-COA decarboxylas 99.8 3.9E-19 1.3E-23 183.8 9.8 153 156-330 369-547 (564)
42 3hww_A 2-succinyl-5-enolpyruvy 99.8 4E-19 1.4E-23 183.7 6.1 151 156-327 366-539 (556)
43 2x7j_A 2-succinyl-5-enolpyruvy 99.7 2.1E-19 7.3E-24 187.5 2.3 152 156-327 404-580 (604)
44 3lq1_A 2-succinyl-5-enolpyruvy 99.7 2E-18 6.9E-23 179.2 3.3 112 196-328 437-561 (578)
45 2c42_A Pyruvate-ferredoxin oxi 99.4 1E-13 3.5E-18 154.6 8.8 99 223-328 952-1071(1231)
46 3ahc_A Phosphoketolase, xylulo 99.3 3.7E-12 1.3E-16 136.2 8.6 130 189-329 169-322 (845)
47 2pgn_A Cyclohexane-1,2-dione h 94.5 0.26 8.9E-06 50.6 12.1 107 202-326 57-165 (589)
48 3eya_A Pyruvate dehydrogenase 94.4 0.12 4.2E-06 52.6 9.1 108 202-326 55-162 (549)
49 2uz1_A Benzaldehyde lyase; thi 94.3 0.13 4.5E-06 52.5 9.2 108 202-326 55-164 (563)
50 4feg_A Pyruvate oxidase; carba 94.3 0.14 4.8E-06 52.9 9.4 106 202-325 64-170 (603)
51 1ybh_A Acetolactate synthase, 94.1 0.12 4.2E-06 53.0 8.7 108 202-326 64-172 (590)
52 1ozh_A ALS, acetolactate synth 94.0 0.13 4.4E-06 52.6 8.5 108 202-326 62-170 (566)
53 2vbi_A Pyruvate decarboxylase; 93.8 0.24 8.1E-06 50.6 10.1 110 202-327 55-170 (566)
54 2iht_A Carboxyethylarginine sy 93.8 0.14 4.7E-06 52.5 8.2 109 202-327 62-172 (573)
55 1t9b_A Acetolactate synthase, 93.7 0.18 6.3E-06 52.9 9.1 107 202-325 134-241 (677)
56 2wvg_A PDC, pyruvate decarboxy 93.5 0.29 9.8E-06 50.0 10.1 110 202-327 55-170 (568)
57 2nxw_A Phenyl-3-pyruvate decar 93.5 0.21 7.2E-06 51.0 9.0 110 202-326 73-186 (565)
58 2x7j_A 2-succinyl-5-enolpyruvy 93.3 0.27 9.3E-06 50.6 9.5 110 202-326 83-198 (604)
59 1q6z_A BFD, BFDC, benzoylforma 92.6 0.3 1E-05 49.3 8.5 109 202-327 52-162 (528)
60 3lq1_A 2-succinyl-5-enolpyruvy 92.3 0.46 1.6E-05 48.6 9.6 108 203-325 64-177 (578)
61 1yd7_A 2-keto acid:ferredoxin 92.3 0.15 5E-06 50.1 5.6 107 200-325 76-187 (395)
62 1v5e_A Pyruvate oxidase; oxido 92.1 0.31 1.1E-05 50.1 8.0 93 226-326 71-164 (590)
63 2q28_A Oxalyl-COA decarboxylas 92.0 0.22 7.7E-06 50.7 6.7 109 202-326 59-169 (564)
64 2c31_A Oxalyl-COA decarboxylas 92.0 0.24 8.2E-06 50.6 6.9 109 202-326 61-171 (568)
65 2pan_A Glyoxylate carboligase; 91.8 0.89 3.1E-05 46.8 11.1 107 202-326 79-188 (616)
66 2vbf_A Branched-chain alpha-ke 90.1 0.66 2.2E-05 47.3 8.0 108 202-326 77-190 (570)
67 2vk8_A Pyruvate decarboxylase 89.6 0.63 2.1E-05 47.4 7.4 109 202-326 56-170 (563)
68 1ovm_A Indole-3-pyruvate decar 89.5 0.69 2.3E-05 46.9 7.6 108 202-326 57-170 (552)
69 2r8o_A Transketolase 1, TK 1; 88.8 1.3 4.6E-05 46.3 9.4 102 201-323 415-518 (669)
70 3mos_A Transketolase, TK; thia 88.8 0.9 3.1E-05 47.2 8.0 101 202-323 369-470 (616)
71 2o1s_A 1-deoxy-D-xylulose-5-ph 88.0 1.3 4.3E-05 45.9 8.5 100 201-323 374-476 (621)
72 2e6k_A Transketolase; structur 87.4 1.6 5.6E-05 45.4 8.9 102 201-323 410-513 (651)
73 3hww_A 2-succinyl-5-enolpyruvy 87.3 2.4 8.4E-05 43.0 10.0 106 202-325 60-170 (556)
74 3kom_A Transketolase; rossmann 87.2 1.4 4.8E-05 46.1 8.3 101 201-322 416-518 (663)
75 1gpu_A Transketolase; transfer 85.9 1.5 5.1E-05 46.0 7.6 101 202-323 423-526 (680)
76 3l84_A Transketolase; TKT, str 85.1 1.6 5.6E-05 45.4 7.4 102 201-323 395-497 (632)
77 2o1x_A 1-deoxy-D-xylulose-5-ph 84.1 1.4 4.8E-05 45.7 6.4 99 201-323 377-478 (629)
78 1itz_A Transketolase; calvin c 83.2 1.8 6.1E-05 45.4 6.8 101 202-323 428-531 (675)
79 1r9j_A Transketolase; domains, 83.1 3.2 0.00011 43.4 8.7 101 202-323 416-518 (673)
80 3m49_A Transketolase; alpha-be 82.8 3.5 0.00012 43.4 8.8 102 201-323 440-543 (690)
81 2ozl_B PDHE1-B, pyruvate dehyd 81.2 2.4 8.4E-05 40.5 6.4 98 200-323 74-183 (341)
82 1ik6_A Pyruvate dehydrogenase; 79.3 3.2 0.00011 40.2 6.6 98 201-323 111-219 (369)
83 3uk1_A Transketolase; structur 78.4 4.2 0.00014 43.0 7.6 101 201-322 461-562 (711)
84 1qs0_B 2-oxoisovalerate dehydr 75.8 5.2 0.00018 37.9 6.9 101 200-324 64-174 (338)
85 2c42_A Pyruvate-ferredoxin oxi 73.5 11 0.00037 42.3 9.6 113 200-332 66-178 (1231)
86 3rim_A Transketolase, TK; TPP, 69.2 15 0.00051 38.6 9.0 102 201-323 445-550 (700)
87 1umd_B E1-beta, 2-OXO acid deh 59.6 36 0.0012 31.8 9.0 97 201-322 64-171 (324)
88 3obi_A Formyltetrahydrofolate 55.9 25 0.00084 32.8 7.0 54 223-295 89-146 (288)
89 1w85_B Pyruvate dehydrogenase 55.6 23 0.00078 33.2 6.8 97 200-322 62-170 (324)
90 3o1l_A Formyltetrahydrofolate 55.6 20 0.00068 33.7 6.3 53 223-294 105-160 (302)
91 3ibs_A Conserved hypothetical 54.2 57 0.002 27.6 8.8 73 224-296 111-198 (218)
92 2bfd_B 2-oxoisovalerate dehydr 51.2 21 0.0007 33.9 5.8 99 200-323 79-189 (342)
93 3nrb_A Formyltetrahydrofolate 47.7 28 0.00097 32.3 6.0 55 223-295 88-145 (287)
94 3kcq_A Phosphoribosylglycinami 46.6 26 0.00089 31.2 5.3 58 223-297 8-68 (215)
95 4ds3_A Phosphoribosylglycinami 45.2 35 0.0012 30.2 6.0 56 223-295 7-65 (209)
96 3tqr_A Phosphoribosylglycinami 43.7 24 0.00082 31.4 4.6 56 223-295 5-62 (215)
97 3lou_A Formyltetrahydrofolate 41.7 27 0.00091 32.6 4.8 54 223-295 95-151 (292)
98 3n0v_A Formyltetrahydrofolate 40.7 25 0.00086 32.7 4.4 54 223-295 90-146 (286)
99 3av3_A Phosphoribosylglycinami 38.9 38 0.0013 29.8 5.2 56 225-296 5-62 (212)
100 3hyn_A Putative signal transdu 38.0 29 0.001 30.4 4.0 39 223-261 79-118 (189)
101 2jgd_A 2-oxoglutarate dehydrog 35.3 63 0.0021 35.1 7.0 103 200-321 664-775 (933)
102 3da8_A Probable 5'-phosphoribo 35.3 36 0.0012 30.3 4.4 84 224-326 13-98 (215)
103 2yic_A 2-oxoglutarate decarbox 34.1 67 0.0023 34.6 6.9 106 200-322 596-708 (868)
104 1meo_A Phosophoribosylglycinam 33.8 43 0.0015 29.5 4.6 54 225-295 2-58 (209)
105 3ghf_A Septum site-determining 32.0 74 0.0025 25.4 5.4 48 279-326 8-57 (120)
106 3p9x_A Phosphoribosylglycinami 30.8 28 0.00096 30.9 2.9 54 225-295 4-60 (211)
107 2ywr_A Phosphoribosylglycinami 30.4 55 0.0019 28.8 4.8 56 225-296 3-60 (216)
108 4hhu_A OR280; engineered prote 29.6 72 0.0025 25.9 4.8 42 278-319 74-115 (170)
109 1n3y_A Integrin alpha-X; alpha 29.2 1.3E+02 0.0043 24.9 6.7 78 224-309 110-190 (198)
110 2xt6_A 2-oxoglutarate decarbox 27.3 91 0.0031 34.5 6.7 106 200-322 841-953 (1113)
111 1jkx_A GART;, phosphoribosylgl 26.9 43 0.0015 29.6 3.3 54 225-295 2-58 (212)
112 3auf_A Glycinamide ribonucleot 24.7 93 0.0032 27.7 5.2 56 225-296 24-81 (229)
113 3t5g_A GTP-binding protein RHE 24.4 1.6E+02 0.0054 23.5 6.3 64 250-317 109-172 (181)
114 3hbm_A UDP-sugar hydrolase; PS 23.7 1.8E+02 0.006 26.6 7.1 34 228-262 3-38 (282)
115 1x0u_A Hypothetical methylmalo 23.2 76 0.0026 32.0 4.7 71 191-265 97-176 (522)
116 4hhu_A OR280; engineered prote 23.0 1.1E+02 0.0036 24.9 4.6 33 287-319 2-34 (170)
117 1on3_A Methylmalonyl-COA carbo 22.7 87 0.003 31.6 5.1 69 191-265 101-180 (523)
118 1hi9_A Dciaa, dipeptide transp 22.5 58 0.002 30.1 3.4 75 247-325 140-223 (274)
119 2x5n_A SPRPN10, 26S proteasome 22.3 81 0.0028 27.0 4.2 35 225-259 108-142 (192)
120 3c5c_A RAS-like protein 12; GD 21.5 2E+02 0.0069 23.4 6.5 88 222-313 91-185 (187)
No 1
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=3.6e-58 Score=459.60 Aligned_cols=284 Identities=24% Similarity=0.332 Sum_probs=264.5
Q ss_pred ccccchhHHHHHHhhhcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcCCC
Q 018048 60 RRLPVVAVSEVVKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE 139 (361)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~~~ 139 (361)
...++.+++.+|+++...+...+.+++++++++|+.|+++|.||+++.++|+||++ +|+|++.||||+++|++.+|+++
T Consensus 47 ~~~~~~~~~~ld~~g~~~~~~~~~~~~e~~~~~y~~M~~~R~fe~~~~~~~~qgr~-~~~~~~~GqEA~~vg~~~al~~~ 125 (407)
T 1qs0_A 47 ADLSYSLVRVLDEQGDAQGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKM-SFYMQSLGEEAIGSGQALALNRT 125 (407)
T ss_dssp HHHHTSCBCCBCTTSCBCSGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SCCCCCTTTHHHHHHHHHHSCTT
T ss_pred hccCCCeEEEECCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-ccCcCCCChHHHHHHHHHhcCCC
Confidence 34567788889999877766668899999999999999999999999999999998 58999999999999999999999
Q ss_pred cEEEcccCCcchhhcCCCCHHHHHHHHhcCcCCCcccCCCccccccccccccCCccccccccHHHHHHHHHHHHHHhhhh
Q 018048 140 DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 219 (361)
Q Consensus 140 D~v~~~yR~~~~~l~~g~~~~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~ 219 (361)
|+|+++||+|++.|++|+++.++|.+++++..+.+.|.++++|+.....++.+++|+||+++|+|+|+|+|.+++
T Consensus 126 D~v~~~yR~~~~~l~~g~~~~~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~----- 200 (407)
T 1qs0_A 126 DMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIK----- 200 (407)
T ss_dssp SEEECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHT-----
T ss_pred CEEEecccchHHHHhcCCCHHHHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHh-----
Confidence 999999999999999999999999999999988888989999998877888899999999999999999998887
Q ss_pred hcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccccccccccc-CCcchhhccccCCccEEEEeCCCH
Q 018048 220 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT-SDPQIYKKGPAFGMPGFHVDGMDV 298 (361)
Q Consensus 220 ~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~-~~~d~~~~A~a~Gi~~~~Vdg~D~ 298 (361)
+++++|||++|||++++|.|+|+|++|++|+||+||||+||+|+++++...+. ..++++++|++||+++++|||+|+
T Consensus 201 --~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~ 278 (407)
T 1qs0_A 201 --GDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDF 278 (407)
T ss_dssp --TCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCH
T ss_pred --CCCCEEEEEECCchhhcChHHHHHHHHHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCH
Confidence 57899999999999999999999999999999999999999999988766655 578999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCC-CCCCCCHHHHHhHHHh
Q 018048 299 LKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD-PDELRDPGEHLVLVLF 351 (361)
Q Consensus 299 ~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~D-p~~yR~~~e~~~~~~~ 351 (361)
++|++++++|+++++++++|+|||++|||..||+++| |+.||+++|++.|..-
T Consensus 279 ~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~Ghs~~Dd~~~Yr~~~e~~~~~~~ 332 (407)
T 1qs0_A 279 VAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLG 332 (407)
T ss_dssp HHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGTSCTTHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEEeeccCCcCCCCCccccCCHHHHHHHhcC
Confidence 9999999999999999999999999999999999997 8899999999999753
No 2
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=5.8e-58 Score=457.56 Aligned_cols=305 Identities=24% Similarity=0.355 Sum_probs=261.3
Q ss_pred CCcccCccceeecccccCCCCCCcccccchhHHHHHHhhhccc-ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCe
Q 018048 36 GTSFLGSTRKLRVNSVHSNQGNVRRRLPVVAVSEVVKEKKVKS-ISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGK 114 (361)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk 114 (361)
..+|+|...+|. +++.+.++ -....+.+++.+|+++.... ...+.+++++++++|+.|+++|.||+++.+++++||
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~~~~~e~~~~~y~~M~~~r~fe~~~~~~~~~gr 82 (400)
T 2bfd_A 6 KPQFPGASAEFI-DKLEFIQP--NVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGR 82 (400)
T ss_dssp CCCCTTCCCCCC-SSCCCCCC--CCSSCSCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCCCcccc-cceeeccC--cccCCCCeeEEECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 568888877776 77777765 33456789999999997653 345789999999999999999999999999999999
Q ss_pred eceeeecCCCchhHHHHHHHhcCCCcEEEcccCCcchhhcCCCCHHHHHHHHhcCcCCCcccCCCccccccccccccCCc
Q 018048 115 MFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGF 194 (361)
Q Consensus 115 ~~g~~~~~~GqEa~~vg~~~~l~~~D~v~~~yR~~~~~l~~g~~~~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~ 194 (361)
+ +|+|++.||||+++|++.+|+++|+|+++||+|+..+.+|.++.++|.+++++..+.+.|.++++|+.....++.+++
T Consensus 83 i-~~~~~~~GqEa~~vg~~~al~~~D~v~~~yR~~~~~~~~G~~~~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~ 161 (400)
T 2bfd_A 83 I-SFYMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTIS 161 (400)
T ss_dssp S-SCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCC
T ss_pred c-ceeecCCChHHHHHHHHHhcCCCCEEEecCcCHHHHHHcCCCHHHHHHHhcCCCCCCCCCCCCCcCCcccccCccccC
Confidence 8 489999999999999999999999999999999999999999999999999998888888888999987777788888
Q ss_pred cccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccccccccccc
Q 018048 195 AFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT 274 (361)
Q Consensus 195 g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~ 274 (361)
|+||+++|+|+|+|+|.+++ +++++|||++|||+++||.|+|+|++|++|+||+||||.||+|+++++...+.
T Consensus 162 g~lG~~lp~AvG~AlA~~~~-------~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~~i~~~~~~~~ 234 (400)
T 2bfd_A 162 SPLATQIPQAVGAAYAAKRA-------NANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQY 234 (400)
T ss_dssp SSTTTHHHHHHHHHHHHHHH-------TCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTC
T ss_pred ccccccccHHHHHHHhhhhh-------CCCCeEEEEECchhhhcChHHHHHHHHHHHCcCEEEEEECCceeeeecccccC
Confidence 99999999999999998877 46899999999999999999999999999999999999999999998877777
Q ss_pred CCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCC-CCCCCCHHHHHhHHHh
Q 018048 275 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD-PDELRDPGEHLVLVLF 351 (361)
Q Consensus 275 ~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~D-p~~yR~~~e~~~~~~~ 351 (361)
..++++++|++||+++++|||+|+++|++++++|++++|++++|+|||++|||..||+++| |+.||+++|++.|..-
T Consensus 235 ~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~tyR~~gHs~~D~~~~Yr~~~e~~~~~~~ 312 (400)
T 2bfd_A 235 RGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQ 312 (400)
T ss_dssp SSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------
T ss_pred CCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeeeeCCCCCCCCCccCCCHHHHHHHHhc
Confidence 7789999999999999999999999999999999999999999999999999999999998 5789999999999864
No 3
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=1.2e-57 Score=450.23 Aligned_cols=260 Identities=39% Similarity=0.734 Sum_probs=243.6
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcCCCcEEEcccCCcchhhcCCCCH
Q 018048 80 SNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPA 159 (361)
Q Consensus 80 ~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~~~D~v~~~yR~~~~~l~~g~~~ 159 (361)
..+.+++++++++|+.|+++|.||+++..+++||++.||+|++.||||+++|++.+|++.|+|+++||+|++.+++|+++
T Consensus 27 ~~~~l~~e~l~~~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~~~D~i~~~yR~~~~~~~~G~~~ 106 (365)
T 2ozl_A 27 VTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSV 106 (365)
T ss_dssp SEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhCCCCEEehHHHHHHHHHhcCCCH
Confidence 44568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCcccCCCccccccccccccCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCc
Q 018048 160 RAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNG 239 (361)
Q Consensus 160 ~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g 239 (361)
.++|.+++++.++.+.|.+|++|+.+ .++.+++|+||+++|+|+|+|+|.+++ +++++|||++|||++++|
T Consensus 107 ~~i~~e~~g~~~g~~~g~gg~~H~~~--~~~~~~~g~~G~~lp~A~G~A~A~~~~-------~~~~~vv~~~GDGa~~~G 177 (365)
T 2ozl_A 107 REILAELTGRKGGCAKGKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYN-------GKDEVCLTLYGDGAANQG 177 (365)
T ss_dssp HHHHHHHTTCTTSTTTTSSCTTCCCB--TTBCCCCCSTTTHHHHHHHHHHHHHHH-------TCCCCEEEEEETTGGGCH
T ss_pred HHHHHHHcCCCCCCCCCCCCCCCcCc--cccCCCcchhhhhhHHHHHHHHHHHhc-------CCCceEEEEECchhhhcc
Confidence 99999999999998888899999864 367888899999999999999998887 578999999999999999
Q ss_pred chHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCE
Q 018048 240 QFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319 (361)
Q Consensus 240 ~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~ 319 (361)
.++|+||+|+.|++|+||||+||+|+++++...+...+++++ ++||+++++|||+|+++|++++++|++++++++||+
T Consensus 178 ~~~Ealn~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~~~r~~~gP~ 255 (365)
T 2ozl_A 178 QIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPI 255 (365)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 999999999999999999999999999887666666778887 589999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCC-CCCCHHHHHhHHH
Q 018048 320 LVECETYRFRGHSLADPD-ELRDPGEHLVLVL 350 (361)
Q Consensus 320 lIev~t~R~~gHs~~Dp~-~yR~~~e~~~~~~ 350 (361)
|||++|||.+||+++||. .||+++|++.|..
T Consensus 256 lIe~~t~R~~gHs~~D~~~~Yr~~~e~~~~~~ 287 (365)
T 2ozl_A 256 LMELQTYRYHGHEMSDPGVSYRTREEIQEVRS 287 (365)
T ss_dssp EEEEECCCSSCSSTTCCSCSSSCHHHHHHHHH
T ss_pred EEEEEeecCCCCCCCCCCcccCCHHHHHHHHh
Confidence 999999999999999964 7999999999975
No 4
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=9.3e-56 Score=437.28 Aligned_cols=272 Identities=30% Similarity=0.419 Sum_probs=245.0
Q ss_pred cchhHHHHHHhhhccc-ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcCCCcE
Q 018048 63 PVVAVSEVVKEKKVKS-ISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDS 141 (361)
Q Consensus 63 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~~~D~ 141 (361)
.+.+++.+|+++.... ...+.+++++++++|+.|+++|.||+++.+++++|++ ||+|++.||||+++|++.+|+++|+
T Consensus 19 ~~~~~~~l~~~g~~~~~~~~~~l~~e~l~~~y~~M~~~R~fe~~~~~~~~qgr~-g~~~~~~G~Ea~~vg~~~~l~~~D~ 97 (368)
T 1w85_A 19 QFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKEDF 97 (368)
T ss_dssp TCCEECSBCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCCTTCHHHHHHHHHTCCTTCE
T ss_pred CCCeeEEECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCCHHHHHHHHHHhcCCcCE
Confidence 3456778888886553 3456799999999999999999999999999999998 9999999999999999999999999
Q ss_pred EEcccCCcchhhcCCCCHHHHHHHHhcCcCCCcccCCCccccccccccccCCccccccccHHHHHHHHHHHHHHhhhhhc
Q 018048 142 VVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEA 221 (361)
Q Consensus 142 v~~~yR~~~~~l~~g~~~~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~ 221 (361)
++++||+|++.+++|.++..+|.+++++.+ +|++| ...++.+++|+||+++|+|+|+|+|.+++
T Consensus 98 v~~~~R~~~~~~~~G~~~~~~~~el~G~~~------G~~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~------- 161 (368)
T 1w85_A 98 ILPGYRDVPQIIWHGLPLYQAFLFSRGHFH------GNQIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMR------- 161 (368)
T ss_dssp EECCSSCHHHHHHTTCCHHHHHHHHHTCGG------GGCCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHT-------
T ss_pred EEecchhHHHHHhcCCCHHHHHHHHCCCCC------CCCCC---cccccCCCccccCccccHHHHHHHHhHhh-------
Confidence 999999999999999999999999999865 35555 34567888999999999999999998877
Q ss_pred CCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCCHHHH
Q 018048 222 DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKV 301 (361)
Q Consensus 222 ~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v 301 (361)
+++++|||++|||++++|.++|+|++|++++||+||||+||+|+++++...+...+++.++|++||+++++|||+|+++|
T Consensus 162 ~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av 241 (368)
T 1w85_A 162 GKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAV 241 (368)
T ss_dssp TCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHH
T ss_pred CCCCeEEEEEchhhhhhcHHHHHHHHHHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHH
Confidence 57899999999999999999999999999999999999999999988777777778999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEEEecCCCCC-CCC-CCCCCCHHHHHhHHHh
Q 018048 302 REVAKEAIERARRGEGPTLVECETYRFRGHS-LAD-PDELRDPGEHLVLVLF 351 (361)
Q Consensus 302 ~~al~~Al~~ar~~~gP~lIev~t~R~~gHs-~~D-p~~yR~~~e~~~~~~~ 351 (361)
++++++|+++++++++|+|||++|||.+||+ ++| |+.||+++|++.|..-
T Consensus 242 ~~a~~~A~~~~r~~~gP~lIe~~t~r~~gHs~~~Ddp~~yr~~~e~~~~~~~ 293 (368)
T 1w85_A 242 YAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKK 293 (368)
T ss_dssp HHHHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEEEeeccCCCCCCCCCccccCCHHHHHHHhcC
Confidence 9999999999999999999999999999999 987 8999999999999863
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=8e-52 Score=409.19 Aligned_cols=284 Identities=32% Similarity=0.477 Sum_probs=260.5
Q ss_pred cccchhHHHHHHhhhcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcCCC-
Q 018048 61 RLPVVAVSEVVKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE- 139 (361)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~~~- 139 (361)
...+..++.+|+++.........+++++++++|+.|+++|.||.++..++++|++ |+++++.|+|+++++++.+++++
T Consensus 10 ~~~~~~~~~l~~~g~~~~~~~~~l~~~~l~~l~~~m~~~R~~~~~~~~~~~~G~~-g~~~~~~G~ea~~~~~~~~l~~~r 88 (367)
T 1umd_A 10 TFTEEPIRLIGEEGEWLGDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGF 88 (367)
T ss_dssp SSCSSCBCCBCTTSCBCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-SCCCCCTTCHHHHHHHHHHSCTTT
T ss_pred CCCCCeEEEECCCCCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-cCCCCCcCHHHHHHHHHHHcCCCC
Confidence 3455678888888875544456789999999999999999999999999999999 89999999999999999999988
Q ss_pred cEEEcccCCcchhhcCCCCHHHHHHHHhcCcCCCcccCCCccccccccccccCCccccccccHHHHHHHHHHHHHHhhhh
Q 018048 140 DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLK 219 (361)
Q Consensus 140 D~v~~~yR~~~~~l~~g~~~~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~ 219 (361)
|+++++||+|++.+.+|.++.++|.+++++.++++.|.++++|+..+..++.+.+|++|.++|.|+|+|+|.|+.
T Consensus 89 D~i~~s~r~~~~~~~~G~~~~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~----- 163 (367)
T 1umd_A 89 DWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLL----- 163 (367)
T ss_dssp SEEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHT-----
T ss_pred cEEEeCcHHHHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHh-----
Confidence 999999999999999999999999999999988877777888887777778888999999999999999998887
Q ss_pred hcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCCHH
Q 018048 220 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVL 299 (361)
Q Consensus 220 ~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~ 299 (361)
+++++|||++|||++++|.++|+|++|+++++|+|+||.||+|+++++...+...+++.+++++||+++++|||+|++
T Consensus 164 --~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~ 241 (367)
T 1umd_A 164 --RTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVL 241 (367)
T ss_dssp --TCCCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHH
T ss_pred --CCCCeEEEEEcccccccCcHHHHHHHHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHH
Confidence 578999999999999999999999999999999999999999999887666667789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCC-CCCCCCHHHHHhHHHhh
Q 018048 300 KVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD-PDELRDPGEHLVLVLFI 352 (361)
Q Consensus 300 ~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~D-p~~yR~~~e~~~~~~~~ 352 (361)
+|++++++|+++++++++|+|||++|+|..||+++| |+.||+++|++.|..-+
T Consensus 242 av~~a~~~A~~~a~~~~gP~lIe~~t~r~~Ghs~~D~~~~Yr~~~e~~~~~~~d 295 (367)
T 1umd_A 242 ASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKD 295 (367)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEEeecCCCCCCCCCccccCCHHHHHHHHcCC
Confidence 999999999999999999999999999999999998 78999999999998643
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.1e-46 Score=405.55 Aligned_cols=277 Identities=21% Similarity=0.236 Sum_probs=231.1
Q ss_pred HHHHHhhhcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcC------CCcE
Q 018048 68 SEVVKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK------KEDS 141 (361)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~------~~D~ 141 (361)
+.|.+++++.+. +.+++++++++|+.|+++|.||+++.++|++||++| ..|||+++++++.+++ ++|+
T Consensus 101 ~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~R~fE~~l~~~~~~~k~~g----~~G~Ea~~~g~~~~l~~~~~l~~~D~ 174 (868)
T 2yic_A 101 QRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFS----LEGAETVIPMMDAVIDQCAEHGLDEV 174 (868)
T ss_dssp HHHHHHHHSSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGC----CTTCTTHHHHHHHHHHHHHHTTCSEE
T ss_pred hHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----CCChHHHHHHHHHHHHHhhhCCCCCE
Confidence 457777777644 789999999999999999999999999999999987 3899999999987754 7999
Q ss_pred EEc-ccCCcchhhc--CCCCHHHHHHHHhcCcCCC-ccc-CCCcccccccc------------ccccCCccccccccHHH
Q 018048 142 VVS-TYRDHVHALS--KGVPARAVMSELFGKATGC-CRG-QGGSMHMFSKE------------HNLLGGFAFIGEGIPVA 204 (361)
Q Consensus 142 v~~-~yR~~~~~l~--~g~~~~~~~~el~~~~~g~-~~g-d~G~~h~~~~~------------~~~~~~~g~mG~~lP~A 204 (361)
|++ +||+|++.|+ +|+++.++|.|++++.++. +.| .+..+|+.... .++.++.++||+++|+|
T Consensus 175 v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~P~A 254 (868)
T 2yic_A 175 VIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVL 254 (868)
T ss_dssp EEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHH
T ss_pred EEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHH
Confidence 998 7999999999 9999999999999998765 333 22245765432 23356789999999999
Q ss_pred HHHHHHHHHHHhhhh---hcCCCceEEEEECCCcc-cCcchHHHHHHhhhCCCC---eEEEEEcCCcccccccccccCCc
Q 018048 205 TGAAFTSKYRREVLK---EADCDHVTLAFFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGMSHLRATSDP 277 (361)
Q Consensus 205 iGaA~A~k~~~~~~~---~~~~~~~Vv~~~GDGs~-~~g~~~eeL~tA~~~~LP---vi~VV~NN~y~is~~~~~q~~~~ 277 (361)
+|+|+|.|++++... ....+.+|||++|||+| ++|.|+|+||+|+.|++| +||||+||+|+++++...+...+
T Consensus 255 ~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN~~g~st~~~~~~s~~ 334 (868)
T 2yic_A 255 EGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSE 334 (868)
T ss_dssp HHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSS
T ss_pred HHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcCCcccccCcccccccc
Confidence 999999988752110 00156799999999997 799999999999999999 99999999999998765555667
Q ss_pred chhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCCCCCCCCHHHHHhHHH
Q 018048 278 QIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPGEHLVLVL 350 (361)
Q Consensus 278 d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~Dp~~yR~~~e~~~~~~ 350 (361)
++.++|++||+++++|||+|+++|++++++|+++++++++|+|||++|||.+||+++|+..||.++|.+.|..
T Consensus 335 ~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~~~~p~~~~~~~~ 407 (868)
T 2yic_A 335 YCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDT 407 (868)
T ss_dssp STTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTCHHHHHHHTT
T ss_pred CHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccccCChHHHHHHHh
Confidence 7889999999999999999999999999999999999999999999999999999999777777777777764
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.4e-45 Score=405.57 Aligned_cols=277 Identities=21% Similarity=0.236 Sum_probs=229.3
Q ss_pred HHHHHhhhcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhc------CCCcE
Q 018048 68 SEVVKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLL------KKEDS 141 (361)
Q Consensus 68 ~~~~~~~~~~~~~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l------~~~D~ 141 (361)
+.|.+++++.+. +.+++++++++|+.|+++|.||+++.++|++||++|+ .|||++++|++.++ +++|+
T Consensus 346 ~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~~k~~g~----~GqEa~~~g~~~~l~~~~~l~~~D~ 419 (1113)
T 2xt6_A 346 QRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIPMMDAVIDQCAEHGLDEV 419 (1113)
T ss_dssp HHHHHHHHHSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHHHHHHHHHHHHHTTCSEE
T ss_pred hHHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHHHHHHHHHHhhhCCCCCE
Confidence 457777777644 7899999999999999999999999999999999874 89999999998775 47999
Q ss_pred EEc-ccCCcchhhc--CCCCHHHHHHHHhcCcCCC-ccc-CCCcccccccc------------ccccCCccccccccHHH
Q 018048 142 VVS-TYRDHVHALS--KGVPARAVMSELFGKATGC-CRG-QGGSMHMFSKE------------HNLLGGFAFIGEGIPVA 204 (361)
Q Consensus 142 v~~-~yR~~~~~l~--~g~~~~~~~~el~~~~~g~-~~g-d~G~~h~~~~~------------~~~~~~~g~mG~~lP~A 204 (361)
|++ +||+|++.|+ +|+++.++|.|++++.++. +.| .+..+|+.... .++.++.++||+++|+|
T Consensus 420 v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~p~A 499 (1113)
T 2xt6_A 420 VIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVL 499 (1113)
T ss_dssp EEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHH
T ss_pred EEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHH
Confidence 998 7999999999 9999999999999998765 333 22245765422 23356789999999999
Q ss_pred HHHHHHHHHHHhhhh---hcCCCceEEEEECCCcc-cCcchHHHHHHhhhCCCC---eEEEEEcCCcccccccccccCCc
Q 018048 205 TGAAFTSKYRREVLK---EADCDHVTLAFFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGMSHLRATSDP 277 (361)
Q Consensus 205 iGaA~A~k~~~~~~~---~~~~~~~Vv~~~GDGs~-~~g~~~eeL~tA~~~~LP---vi~VV~NN~y~is~~~~~q~~~~ 277 (361)
+|+|+|.|++++... ....+.+++|++|||+| ++|.|+|+||+|+.++|| +||||+||+|+++++...+...+
T Consensus 500 ~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN~~gist~~~~~~s~~ 579 (1113)
T 2xt6_A 500 EGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSE 579 (1113)
T ss_dssp HHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSS
T ss_pred HHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeCCcccccCcccccccc
Confidence 999999998752110 00156899999999996 899999999999999999 99999999999998755455556
Q ss_pred chhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCCCCCCCCHHHHHhHHH
Q 018048 278 QIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPGEHLVLVL 350 (361)
Q Consensus 278 d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~Dp~~yR~~~e~~~~~~ 350 (361)
++.+++++||+++++|||+|+++|++++++|+++++++++|+|||++|||.+||+++|+..||.++|.+.|..
T Consensus 580 ~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~~~~~~~~~~~~~ 652 (1113)
T 2xt6_A 580 YCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDT 652 (1113)
T ss_dssp STTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTCHHHHHHHTT
T ss_pred CHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccccCChHHHHHHHh
Confidence 7889999999999999999999999999999999999999999999999999999999777777777777664
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=3.6e-45 Score=395.92 Aligned_cols=273 Identities=19% Similarity=0.210 Sum_probs=212.4
Q ss_pred HHHhhhcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcC------CCcEEE
Q 018048 70 VVKEKKVKSISNLLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK------KEDSVV 143 (361)
Q Consensus 70 ~~~~~~~~~~~~~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~------~~D~v~ 143 (361)
|.+++++.. .+.+++|+++++|+.|+++|.||+++.++|++||++| +.|||++.+|++.+++ .+|+|+
T Consensus 183 w~~~~~e~~--~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkrf~----~~G~Ea~i~g~~~~~~~a~~~g~~D~v~ 256 (933)
T 2jgd_A 183 WIQQRIESG--RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFS----LEGGDALIPMLKEMIRHAGNSGTREVVL 256 (933)
T ss_dssp HHHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCC----CTTCTTHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----CCCchHHHHHHHHHHHHHhhCCCCCEEe
Confidence 555555543 5689999999999999999999999999999999865 6899999999877775 589999
Q ss_pred c-ccCCcchhhc--CCCCHHHHHHHHhcCcCCCcccCCCccccccccc----------cccCCccccccccHHHHHHHHH
Q 018048 144 S-TYRDHVHALS--KGVPARAVMSELFGKATGCCRGQGGSMHMFSKEH----------NLLGGFAFIGEGIPVATGAAFT 210 (361)
Q Consensus 144 ~-~yR~~~~~l~--~g~~~~~~~~el~~~~~g~~~gd~G~~h~~~~~~----------~~~~~~g~mG~~lP~AiGaA~A 210 (361)
+ +||+|++.|+ +|.++.++|.|++++.++.+.+....+|+..... ++....+++|.++|+|+|+|+|
T Consensus 257 g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~~p~A~G~A~A 336 (933)
T 2jgd_A 257 GMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRA 336 (933)
T ss_dssp ECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccccCHHHHHHHH
Confidence 6 8999999999 9999999999999998776533344567664321 2246779999999999999999
Q ss_pred HHHHHhhhhhcCCCceEEEEECCCcc-cCcchHHHHHHhhhCCCC---eEEEEEcCCccccc-ccccccCCcchhhcccc
Q 018048 211 SKYRREVLKEADCDHVTLAFFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGM-SHLRATSDPQIYKKGPA 285 (361)
Q Consensus 211 ~k~~~~~~~~~~~~~~Vv~~~GDGs~-~~g~~~eeL~tA~~~~LP---vi~VV~NN~y~is~-~~~~q~~~~d~~~~A~a 285 (361)
.++++... .+.+.+|||++|||++ ++|.++|+||+|+.+++| +|+||+||+|++++ +...+...+++.+++++
T Consensus 337 ~~~~~~~~--~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a 414 (933)
T 2jgd_A 337 RLDRLDEP--SSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKM 414 (933)
T ss_dssp HHTTSSSC--CGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGGT
T ss_pred HHhhcccc--CCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHH
Confidence 88763110 0146799999999998 899999999999999999 99999999999998 77766777889999999
Q ss_pred CCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCCCCCCCCHHHHHhHHH
Q 018048 286 FGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPGEHLVLVL 350 (361)
Q Consensus 286 ~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~Dp~~yR~~~e~~~~~~ 350 (361)
||+|+++|||+|+++|+++++.|+++++++++|+|||+.|||..||+++|+..||+++|.+.|-.
T Consensus 415 ~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~~yr~~~e~~~~~~ 479 (933)
T 2jgd_A 415 VQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKK 479 (933)
T ss_dssp TTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC-----------CCTTHHHHHT
T ss_pred cCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccchhhCCHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999878999999999875
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.96 E-value=7.3e-29 Score=260.10 Aligned_cols=226 Identities=18% Similarity=0.192 Sum_probs=162.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcC-CCcEEE--cccCCcchhhcCCCC
Q 018048 82 LLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK-KEDSVV--STYRDHVHALSKGVP 158 (361)
Q Consensus 82 ~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~-~~D~v~--~~yR~~~~~l~~g~~ 158 (361)
..++.+++.++++.| |.+.. ++. ++..|+++++.|+|++.+++...++ +.|+++ ..||++++.+..|.
T Consensus 21 ~~l~~~~l~~l~~~i---R~~~~---~~~--~~~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~~y~~~~l~G~- 91 (621)
T 2o1s_A 21 RLLPKESLPKLCDEL---RRYLL---DSV--SRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGR- 91 (621)
T ss_dssp TTSCGGGHHHHHHHH---HHHHH---HHS--CGGGCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTTCHHHHHTTTT-
T ss_pred hhCCHHHHHHHHHHH---HHHHH---HHH--hhcCCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchHHHHHHHHhCC-
Confidence 357788999999888 54443 222 2346999999999999999999999 889887 57999888888876
Q ss_pred HHHHHHHHhcCcCCCcccCCCccccccccccccCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccC
Q 018048 159 ARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNN 238 (361)
Q Consensus 159 ~~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~ 238 (361)
.++ +..+ .... |..|.......++.+ .++|+||+++|+|+|+|+|.+++ +++++|||++|||++++
T Consensus 92 ~~~-~~~~-r~~~----g~~g~~~~~~s~~~~-~~~G~~G~gl~~A~G~AlA~~~~-------~~~~~Vv~v~GDG~~~~ 157 (621)
T 2o1s_A 92 RDK-IGTI-RQKG----GLHPFPWRGESEYDV-LSVGHSSTSISAGIGIAVAAEKE-------GKNRRTVCVIGDGAITA 157 (621)
T ss_dssp GGG-GGGT-TSTT----SCCSSCCTTTCTTCC-SCCSSSSCHHHHHHHHHHHHHHH-------TSCCCEEEEEETTGGGS
T ss_pred Hhh-hhcc-cccC----CCCCCCCCCCCCCCc-cCCcccchHHHHHHHHHHHHHHh-------CCCCeEEEEEchhhhhc
Confidence 111 1111 1111 111211110112333 34899999999999999998887 57899999999999999
Q ss_pred cchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCC----------------------------------cch-----
Q 018048 239 GQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSD----------------------------------PQI----- 279 (361)
Q Consensus 239 g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~----------------------------------~d~----- 279 (361)
|+++|+|++|+++++|+|+||.||+|+++.+.+.+... .++
T Consensus 158 G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r~~~~~~~~~ 237 (621)
T 2o1s_A 158 GMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMV 237 (621)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEEECC-------------------------------------------------------
T ss_pred cHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999887654432100 122
Q ss_pred --hhccccCCccEE-EEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCC
Q 018048 280 --YKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 334 (361)
Q Consensus 280 --~~~A~a~Gi~~~-~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~ 334 (361)
.+++++||++++ +|||+|+.++.+++++ +++.++|+|||++|+|..||+..
T Consensus 238 ~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~----A~~~~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 238 VPGTLFEELGFNYIGPVDGHDVLGLITTLKN----MRDLKGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp -CHHHHHHTTCEEEEEEETTCHHHHHHHHHH----HHHSCSEEEEEEECCCTTCCCCC
T ss_pred ChhhHHHHCCCeEeeeeCCCCHHHHHHHHHH----HHHcCCCEEEEEEEecccCCChh
Confidence 478899999999 9999999887665555 45568999999999999999854
No 10
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.94 E-value=2.7e-27 Score=248.59 Aligned_cols=222 Identities=18% Similarity=0.171 Sum_probs=160.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHhcC-CCcEEEcccCCcc---hhhcCCC
Q 018048 82 LLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK-KEDSVVSTYRDHV---HALSKGV 157 (361)
Q Consensus 82 ~~l~~~~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~l~-~~D~v~~~yR~~~---~~l~~g~ 157 (361)
..++.+++.++|+.| |.+. .++.. +..|+++++.|+-.+..++...++ +.|+++.. |+|. +.+..|.
T Consensus 23 ~~l~~~~l~~l~~~i---R~~~---~~~~~--~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~GH~~y~~~~l~G~ 93 (629)
T 2o1x_A 23 KRLSREQLPALTEEL---RGEI---VRVCS--RGGLHLASSLGAVDIITALHYVLDSPRDRILFD-VGHQAYAHKILTGR 93 (629)
T ss_dssp TTSCGGGHHHHHHHH---HHHH---HHHHT--TSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-SSTTCHHHHHTTTT
T ss_pred hhCCHHHHHHHHHHH---HHHH---HHHHH--hcCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-CchHHHHHHHHhCc
Confidence 356788999999988 5433 23333 246999999999666666655568 78988877 8885 3444454
Q ss_pred -CHHHHHHHHhcCcCCCcccCCCccccccccccccCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcc
Q 018048 158 -PARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTC 236 (361)
Q Consensus 158 -~~~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~ 236 (361)
+....++++.+ ..|...... ......++|+||+++|+|+|+|+|.+++ +++++|||++|||++
T Consensus 94 ~~~~~~~r~~~g--------~~G~p~~~~-s~~~~~~~G~~G~gl~~AvG~AlA~k~~-------~~~~~Vv~v~GDG~~ 157 (629)
T 2o1x_A 94 RDQMADIKKEGG--------ISGFTKVSE-SEHDAITVGHASTSLTNALGMALARDAQ-------GKDFHVAAVIGDGSL 157 (629)
T ss_dssp GGGGGGTTSTTS--------CCSSCCGGG-CTTCCSCCSSSSCHHHHHHHHHHHHHHH-------TCCCCEEEEEETTGG
T ss_pred HhHHhCcccCCC--------CCCCCCCCC-CCCCCcCCCcccccHhHHHHHHHHHHHh-------CCCCeEEEEEchhhh
Confidence 11111222221 112111111 1123567899999999999999998887 579999999999999
Q ss_pred cCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccC--------------------------C---------cch--
Q 018048 237 NNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS--------------------------D---------PQI-- 279 (361)
Q Consensus 237 ~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~--------------------------~---------~d~-- 279 (361)
++|+++|+|++|+++++|+|+||+||+|+++.+...+.. . +++
T Consensus 158 ~~G~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~ 237 (629)
T 2o1x_A 158 TGGMALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTR 237 (629)
T ss_dssp GSHHHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC---------------------------------------
T ss_pred hccHHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988665431100 0 142
Q ss_pred -----h--hccccCCccEE-EEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCC
Q 018048 280 -----Y--KKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHS 332 (361)
Q Consensus 280 -----~--~~A~a~Gi~~~-~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs 332 (361)
. +++++||++++ +|||+|+.++.++ ++++++.++|+||++.|++..||+
T Consensus 238 ~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~a----l~~A~~~~~P~lI~v~t~kg~G~~ 294 (629)
T 2o1x_A 238 HFFDPASVNPFAAMGVRYVGPVDGHNVQELVWL----LERLVDLDGPTILHIVTTKGKGLS 294 (629)
T ss_dssp ------CCCTTGGGTCEEEEEEESSCHHHHHHH----HHHHTTSSSEEEEEEECCTTTTCH
T ss_pred hhcCcccchHHHhcCCeEEeeECCcCHHHHHHH----HHHHHhcCCCEEEEEEEecCCCCC
Confidence 3 89999999999 9999998877654 555566789999999999999986
No 11
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.92 E-value=2.8e-24 Score=227.42 Aligned_cols=163 Identities=20% Similarity=0.202 Sum_probs=137.3
Q ss_pred ccccCCccccccccHHHHHHHHHHHHHHhhhhhcC---CCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCC
Q 018048 188 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 263 (361)
Q Consensus 188 ~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~---~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~ 263 (361)
.++...+|+||+++|+|+|+|+|.++++..+..++ .+++|||++|||++++|+++|+|++|++++|| +|+||.||+
T Consensus 109 ~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 188 (680)
T 1gpu_A 109 PGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNK 188 (680)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred CCeeeccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcEEEEEECCC
Confidence 34567789999999999999999887753332111 37899999999999999999999999999999 999999999
Q ss_pred cccccccccccCCcchhhccccCCccEE-EEeCC-CHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCCC----C
Q 018048 264 WAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGM-DVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP----D 337 (361)
Q Consensus 264 y~is~~~~~q~~~~d~~~~A~a~Gi~~~-~Vdg~-D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~Dp----~ 337 (361)
|+++.+...+. .+|+.+++++||++++ +|||+ |+.++++++++|.+ ..++|+||+|+|+|..||+..|+ .
T Consensus 189 ~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~ 264 (680)
T 1gpu_A 189 ITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKL---SKDKPTLIKMTTTIGYGSLHAGSHSVHG 264 (680)
T ss_dssp EETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHH---CTTSCEEEEEECCTTTTSTTTTSGGGSS
T ss_pred ceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH---CCCCCEEEEEEeecccccccCCCCccCC
Confidence 99877655443 5789999999999999 99999 99988776666543 36899999999999999997775 6
Q ss_pred CCCCHHHHHhHHHhhhc
Q 018048 338 ELRDPGEHLVLVLFIFC 354 (361)
Q Consensus 338 ~yR~~~e~~~~~~~~~~ 354 (361)
.||+++|++.|......
T Consensus 265 ~~~~~ee~~~~~~~~~~ 281 (680)
T 1gpu_A 265 APLKADDVKQLKSKFGF 281 (680)
T ss_dssp SCCCHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHcCC
Confidence 79999999999876543
No 12
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.91 E-value=2.8e-24 Score=226.40 Aligned_cols=160 Identities=21% Similarity=0.204 Sum_probs=135.4
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhcC---CCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 264 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~---~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y 264 (361)
++..++|+||+++|+|+|+|+|.++++..+...+ ++++|+|++|||++++|+++|+|++|++++|| +|+||.||+|
T Consensus 112 g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~ 191 (651)
T 2e6k_A 112 GVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNRI 191 (651)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECCE
T ss_pred CeeeccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCCc
Confidence 4567789999999999999999887754332111 57899999999999999999999999999999 9999999999
Q ss_pred ccccccccccCCcchhhccccCCccEE-EEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCCCCCC----
Q 018048 265 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDEL---- 339 (361)
Q Consensus 265 ~is~~~~~q~~~~d~~~~A~a~Gi~~~-~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~Dp~~y---- 339 (361)
+++.+...+. .+|+.+++++||++++ +|||+|+.++++++++|. +.++|+||+|+|+|..||+..|+..|
T Consensus 192 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~----~~~~P~lI~~~t~kg~G~~~~~~~~~H~~~ 266 (651)
T 2e6k_A 192 SIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAK----LDERPTLIAVRSHIGFGSPKQDSAKAHGEP 266 (651)
T ss_dssp ETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHH----HSSSCEEEEEECCTTTTSTTTTSGGGTSSC
T ss_pred cccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHH----HCCCCEEEEEEeEecccccccccccccccC
Confidence 9887665554 6799999999999999 999999998877666654 47899999999999999996677665
Q ss_pred CCHHHHHhHHHhhh
Q 018048 340 RDPGEHLVLVLFIF 353 (361)
Q Consensus 340 R~~~e~~~~~~~~~ 353 (361)
++++|++.|....+
T Consensus 267 ~~~~e~~~~~~~~~ 280 (651)
T 2e6k_A 267 LGPEAVEATRRNLG 280 (651)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcC
Confidence 68889988876554
No 13
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.90 E-value=1.2e-23 Score=222.09 Aligned_cols=162 Identities=22% Similarity=0.226 Sum_probs=135.6
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhcC---CCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 264 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~---~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y 264 (361)
++..++|+||+++|+|+|+|+|.+++++.+...+ .+++|||++|||++++|+++|+|++|++++|| +|+||.||+|
T Consensus 108 g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~ 187 (669)
T 2r8o_A 108 GVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGI 187 (669)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSE
T ss_pred CcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 4567889999999999999999887754332111 37899999999999999999999999999999 9999999999
Q ss_pred ccccccccccCCcchhhccccCCccEE-EEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCC-CC-C---CC
Q 018048 265 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL-AD-P---DE 338 (361)
Q Consensus 265 ~is~~~~~q~~~~d~~~~A~a~Gi~~~-~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~-~D-p---~~ 338 (361)
+++.+...+. .+|+.+++++||++++ +|||+|+.++++++++|.+ ..++|+||+++|+|..||+. .| + ..
T Consensus 188 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~~ 263 (669)
T 2r8o_A 188 SIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIGFGSPNKAGTHDSHGA 263 (669)
T ss_dssp ETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTSS
T ss_pred Eecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEeccCcCCcCCCCcccCC
Confidence 9877655443 5789999999999999 9999999988776666543 26899999999999999984 44 3 57
Q ss_pred CCCHHHHHhHHHhhhc
Q 018048 339 LRDPGEHLVLVLFIFC 354 (361)
Q Consensus 339 yR~~~e~~~~~~~~~~ 354 (361)
||+++|++.|......
T Consensus 264 ~~~~ee~~~~~~~~~~ 279 (669)
T 2r8o_A 264 PLGDAEIALTREQLGW 279 (669)
T ss_dssp CCCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHcCC
Confidence 9999999999876643
No 14
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.89 E-value=1.5e-22 Score=211.86 Aligned_cols=148 Identities=22% Similarity=0.315 Sum_probs=121.9
Q ss_pred CCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCccccccc
Q 018048 192 GGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWAIGMSH 270 (361)
Q Consensus 192 ~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y~is~~~ 270 (361)
.++|+||+++|+|+|+|+|.++.+ .++++|||++|||++++|+++|+|++|++++|| +++|+.||+|+++...
T Consensus 118 ~~~G~lG~gl~~A~G~AlA~~~~~------~~~~~vv~v~GDG~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~~~~ 191 (616)
T 3mos_A 118 VATGSLGQGLGAACGMAYTGKYFD------KASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPA 191 (616)
T ss_dssp SCCCSTTCHHHHHHHHHHHHHHTS------CCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBC
T ss_pred ccccccCCccHHHHHHHHHHHHhC------CCCCEEEEEECccccccCcHHHHHHHHHHcCCCcEEEEEECCCCCCcCCc
Confidence 478999999999999999987652 346899999999999999999999999999998 7778888999987766
Q ss_pred ccccCCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCC-CCCCCC----CHHHH
Q 018048 271 LRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA-DPDELR----DPGEH 345 (361)
Q Consensus 271 ~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~-Dp~~yR----~~~e~ 345 (361)
......+++.+++++||+++++|||+|+.++.+++++ + .++|+||+|+|+|..||+.. |+..+- +++|.
T Consensus 192 ~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~----~--~~~P~lI~v~T~kg~G~~~~e~~~~~Hg~~~~~~~~ 265 (616)
T 3mos_A 192 PLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQ----A--KHQPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMA 265 (616)
T ss_dssp TTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHS----C--CSSCEEEEEECCTTTTSTTTTTCSSCTTCCCCHHHH
T ss_pred ccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHh----c--CCCCEEEEEEEecccccccccCchhhcCCCCCHHHH
Confidence 5555567899999999999999999999887665532 2 57999999999999999866 455442 45665
Q ss_pred HhHHHh
Q 018048 346 LVLVLF 351 (361)
Q Consensus 346 ~~~~~~ 351 (361)
+..+..
T Consensus 266 ~~~~~~ 271 (616)
T 3mos_A 266 EQIIQE 271 (616)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 15
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.89 E-value=3.9e-23 Score=218.33 Aligned_cols=160 Identities=21% Similarity=0.193 Sum_probs=134.7
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhcC---CCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 264 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~---~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y 264 (361)
++..++|+||+++|.|+|+|+|.++.+..+..++ .+++|+|++|||++++|.++|+|++|++++|| +|+||.||+|
T Consensus 110 gv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~ 189 (673)
T 1r9j_A 110 GVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYI 189 (673)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSB
T ss_pred CeeeccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 4556789999999999999999988764432222 57899999999999999999999999999999 9999999999
Q ss_pred ccccccccccCCcchhhccccCCccEE-EEeC-CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCCC----CC
Q 018048 265 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDG-MDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP----DE 338 (361)
Q Consensus 265 ~is~~~~~q~~~~d~~~~A~a~Gi~~~-~Vdg-~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~Dp----~~ 338 (361)
+++.+...+. ..|+.+++++||++++ .||| +|+.++++++++|.+ ..++|+||+++|+|..||+..|. ..
T Consensus 190 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~~ 265 (673)
T 1r9j_A 190 SIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKA---TKGKPKMIVQTTTIGFGSSKQGTEKVHGA 265 (673)
T ss_dssp CSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTSTTTTSGGGTSS
T ss_pred ccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHH---cCCCCEEEEEecccccccccCCCcccccC
Confidence 9987766655 6799999999999999 9999 999988776666543 36899999999999999996554 34
Q ss_pred CCCHHHHHhHHHhh
Q 018048 339 LRDPGEHLVLVLFI 352 (361)
Q Consensus 339 yR~~~e~~~~~~~~ 352 (361)
+++++|++.|....
T Consensus 266 ~~~~ee~~~~~~~~ 279 (673)
T 1r9j_A 266 PLGEEDIANIKAKF 279 (673)
T ss_dssp CCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhc
Confidence 67888888877654
No 16
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.88 E-value=3.7e-22 Score=211.05 Aligned_cols=160 Identities=22% Similarity=0.216 Sum_probs=130.7
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhcC---CCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 264 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~---~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y 264 (361)
++..++|+||+++|+|+|+|+|.++++..+...+ ++++|||++|||++++|+++|+|++|++++|| +|+|+.||+|
T Consensus 121 ~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~ 200 (675)
T 1itz_A 121 GVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHI 200 (675)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSE
T ss_pred CeeECCccHHhHHHHHHHHHHHhhhhcccccccccCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCc
Confidence 3456789999999999999999988754332111 68899999999999999999999999999995 9999999999
Q ss_pred ccccccccccCCcchhhccccCCccEE-EEeCC-CHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCC-CCC----
Q 018048 265 AIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGM-DVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA-DPD---- 337 (361)
Q Consensus 265 ~is~~~~~q~~~~d~~~~A~a~Gi~~~-~Vdg~-D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~-Dp~---- 337 (361)
+++.+..... .+|+.+++++||++++ +|||+ |+.++++++++|.+ ..++|+||+|+|++..||+.. |+.
T Consensus 201 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~ 276 (675)
T 1itz_A 201 SIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNTGYDDIRAAIKEAKA---VTDKPTLIKVTTTIGFGSPNKANSYSVHG 276 (675)
T ss_dssp ETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTS
T ss_pred cCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHH---CCCCeEEEEEeeecccCcccccCcccccC
Confidence 9877665544 6899999999999999 99999 99988766655432 268999999999999999864 443
Q ss_pred CCCCHHHHHhHHHhh
Q 018048 338 ELRDPGEHLVLVLFI 352 (361)
Q Consensus 338 ~yR~~~e~~~~~~~~ 352 (361)
.+++++|++.+....
T Consensus 277 ~~~~~e~~~~~~~~~ 291 (675)
T 1itz_A 277 SALGAKEVEATRQNL 291 (675)
T ss_dssp SCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHc
Confidence 346788877776553
No 17
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.88 E-value=2.8e-22 Score=210.12 Aligned_cols=156 Identities=21% Similarity=0.258 Sum_probs=125.5
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCcccc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWAIG 267 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y~is 267 (361)
++...+|+||+++|+|+|+|+|.++++..+.....+++|+|++|||++++|+++|+|++|++++|| +|+|+.||+|+++
T Consensus 108 g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nnN~~~i~ 187 (632)
T 3l84_A 108 GVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFILIYDSNNISIE 187 (632)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETT
T ss_pred CcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEEEEECCCcccc
Confidence 345678999999999999999998775432222348899999999999999999999999999998 8899999999887
Q ss_pred cccccccCCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCC-CCCCC----CCH
Q 018048 268 MSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA-DPDEL----RDP 342 (361)
Q Consensus 268 ~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~-Dp~~y----R~~ 342 (361)
.+.... ..+|+.+++++||+++++|||+|+.++.+ |++++++.++|+||+|+|++..||+.. ++..+ -++
T Consensus 188 ~~~~~~-~~~d~~~~~~a~G~~~~~vdGhd~~~l~~----al~~A~~~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~~l~~ 262 (632)
T 3l84_A 188 GDVGLA-FNENVKMRFEAQGFEVLSINGHDYEEINK----ALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGE 262 (632)
T ss_dssp EEGGGT-CCCCHHHHHHHTTCEEEEEETTCHHHHHH----HHHHHHTCSSCEEEEEECCTTTTCGGGTTCGGGSSSCCCH
T ss_pred cchhhh-cChhHHHHHHHcCCeEEEEeeCCHHHHHH----HHHHHHhCCCCEEEEEeeEeeecCCCCCCcccccCCCCCH
Confidence 655433 46789999999999999999999887755 555566788999999999999999854 33222 245
Q ss_pred HHHHhHH
Q 018048 343 GEHLVLV 349 (361)
Q Consensus 343 ~e~~~~~ 349 (361)
+|++...
T Consensus 263 e~~~~~~ 269 (632)
T 3l84_A 263 EVIKKAK 269 (632)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 18
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.88 E-value=5.3e-23 Score=214.74 Aligned_cols=169 Identities=19% Similarity=0.229 Sum_probs=130.3
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 224 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~ 224 (361)
.+++..++.++...+++ ++..|.|++.+|. .+..+ .++.++||+++|+|+|++++ .++
T Consensus 370 ~l~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~l~~A~Gaala-----------~~~ 438 (603)
T 4feg_A 370 PLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLN-----------YPE 438 (603)
T ss_dssp BCCHHHHHHHHHHHCCTTCEEEECSSHHHHHHHHHCCCCTTCEEECCCSSCCTTCHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHHhCCCCCEEEECCchHHHHHHHhceeCCCCceecCcccccccchhHHHhhHHHh-----------CCC
Confidence 36788888888877653 4567777654442 22333 35689999999999999999 688
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-ccccc----------ccccccCCcchhhccccCCccEEEE
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGM----------SHLRATSDPQIYKKGPAFGMPGFHV 293 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~----------~~~~q~~~~d~~~~A~a~Gi~~~~V 293 (361)
++|||++|||+|+|+ +++|++|+++++|+++||.||+ |++.. ........+|+.++|++||+++++|
T Consensus 439 ~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v 516 (603)
T 4feg_A 439 RQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDFIGVEFNDIDFSKIADGVHMQAFRV 516 (603)
T ss_dssp SCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSCCCSSBCCCCCHHHHHHHTTCEEEEE
T ss_pred CcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCCcccCcCCCCCHHHHHHHCCCeEEEE
Confidence 999999999999998 8999999999999999999887 66411 1111224579999999999999999
Q ss_pred eCCCHHHHHHHHHHHHHHHH--cCCCCEEEEEEEe---cCCCCCCC-CCCCCCCHH
Q 018048 294 DGMDVLKVREVAKEAIERAR--RGEGPTLVECETY---RFRGHSLA-DPDELRDPG 343 (361)
Q Consensus 294 dg~D~~~v~~al~~Al~~ar--~~~gP~lIev~t~---R~~gHs~~-Dp~~yR~~~ 343 (361)
++.+ + +++|+++++ +.+||+||||.|+ |..+|... |+..||..+
T Consensus 517 ~~~~--~----l~~al~~a~~~~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~ 566 (603)
T 4feg_A 517 NKIE--Q----LPDVFEQAKAIAQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAAD 566 (603)
T ss_dssp CBGG--G----HHHHHHHHHHHTTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHH
T ss_pred CCHH--H----HHHHHHHHHHhcCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHH
Confidence 9766 4 456666777 7899999999994 45577766 477787443
No 19
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.87 E-value=5.5e-22 Score=209.73 Aligned_cols=159 Identities=19% Similarity=0.187 Sum_probs=129.6
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhc------CCCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEA------DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVEN 261 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~------~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~N 261 (361)
++...+|+||+++|.|+|+|+|.++++..+.++ ..+++|+|++|||++++|.++|+|++|+.++|| +|+||.|
T Consensus 127 gv~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~ 206 (700)
T 3rim_A 127 GVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDR 206 (700)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CccccccccCCcchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEEC
Confidence 345678999999999999999999875433221 357899999999999999999999999999998 9999999
Q ss_pred CCcccccccccccCCcchhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCCCCC---
Q 018048 262 NLWAIGMSHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPD--- 337 (361)
Q Consensus 262 N~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~Dp~--- 337 (361)
|+|+++.+...+ ...++.+++++||+++++| ||+|+.++++++++|.+ ..++|+||+++|+|.+||+....+
T Consensus 207 N~~si~~~~~~~-~~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG~G~~~~e~~~~~ 282 (700)
T 3rim_A 207 NQISIEDDTNIA-LCEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIGYPAPNLMDTGKA 282 (700)
T ss_dssp CSEETTEEGGGT-CCCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSHHH
T ss_pred CCcccccchhhc-cchhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEeeecCCccCCCccc
Confidence 999998776544 3678999999999999999 99999988776665532 268999999999999999865322
Q ss_pred --CCCCHHHHHhHHHh
Q 018048 338 --ELRDPGEHLVLVLF 351 (361)
Q Consensus 338 --~yR~~~e~~~~~~~ 351 (361)
.-.+++|++.+...
T Consensus 283 Hg~~~~~e~~~~~~~~ 298 (700)
T 3rim_A 283 HGAALGDDEVAAVKKI 298 (700)
T ss_dssp HHSCCCHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHH
Confidence 22466666655443
No 20
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.87 E-value=5.4e-22 Score=210.19 Aligned_cols=157 Identities=24% Similarity=0.299 Sum_probs=116.4
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhcC---CCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLW 264 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~---~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y 264 (361)
++...+|+||+++|+|+|+|+|.++++..+.+++ .+++|||++|||++++|+++|+|++|++++|| +|+|+.||+|
T Consensus 149 gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~ 228 (711)
T 3uk1_A 149 GVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGI 228 (711)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSE
T ss_pred CcccCccchhhHHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCc
Confidence 3446789999999999999999987754332111 27899999999999999999999999999999 9999999999
Q ss_pred ccccccccccCCcchhhccccCCccEEE-EeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCCCC-CCCCC---
Q 018048 265 AIGMSHLRATSDPQIYKKGPAFGMPGFH-VDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA-DPDEL--- 339 (361)
Q Consensus 265 ~is~~~~~q~~~~d~~~~A~a~Gi~~~~-Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs~~-Dp~~y--- 339 (361)
+++.....+ ..+|+.+++++||+++++ |||+|+.++.+ |++++++.++|+||+|+|+|..||+.. ++..|
T Consensus 229 ~i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~----Al~~A~~~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~ 303 (711)
T 3uk1_A 229 SIDGDVVNW-FHDDTPKRFEAYGWNVIPNVNGHDVDAIDA----AIAKAKRSDKPSLICCKTRIGNGAATKAGGHDVHGA 303 (711)
T ss_dssp ETTEEGGGT-CCCCHHHHHHHTTCEEEEEEETTCHHHHHH----HHHHHTTCSSCEEEEEEC------------------
T ss_pred ccccchhhh-cCCCHHHHHHHcCCcEEEEeCCCCHHHHHH----HHHHHHhCCCCEEEEEccccccCCCCCCCcccccCC
Confidence 887655444 468999999999999998 99999887755 555566778999999999999999754 44443
Q ss_pred -CCHHHHHhHHH
Q 018048 340 -RDPGEHLVLVL 350 (361)
Q Consensus 340 -R~~~e~~~~~~ 350 (361)
.+++|++....
T Consensus 304 ~l~~e~~~~~~~ 315 (711)
T 3uk1_A 304 PLGADEIAKTRE 315 (711)
T ss_dssp --CHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 25666665544
No 21
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.86 E-value=1e-21 Score=207.04 Aligned_cols=156 Identities=24% Similarity=0.280 Sum_probs=121.5
Q ss_pred ccCCccccccccHHHHHHHHHHHHHHhhhhhcC---CCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCcc
Q 018048 190 LLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWA 265 (361)
Q Consensus 190 ~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~---~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y~ 265 (361)
+...+|+||+++|+|+|+|+|.++++....+++ .+++|+|++|||++++|+++|+|++|++++|| +|+|+.||+|+
T Consensus 111 ve~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~~ 190 (663)
T 3kom_A 111 VETTTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNIS 190 (663)
T ss_dssp CCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC--
T ss_pred cccCCcchhhHHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCcc
Confidence 446789999999999999999987754321111 27899999999999999999999999999999 88899999998
Q ss_pred cccccccccCCcchhhccccCCccEE-EEeCCCHHHHHHHHHHHHHHHHc-CCCCEEEEEEEecCCCCCCC-CCCCC---
Q 018048 266 IGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARR-GEGPTLVECETYRFRGHSLA-DPDEL--- 339 (361)
Q Consensus 266 is~~~~~q~~~~d~~~~A~a~Gi~~~-~Vdg~D~~~v~~al~~Al~~ar~-~~gP~lIev~t~R~~gHs~~-Dp~~y--- 339 (361)
++.+.... ..+|+.+++++||++++ +|||+|+.++++ |++++++ .++|+||+|+|++..||+.. ++..+
T Consensus 191 i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~----al~~A~~~~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~ 265 (663)
T 3kom_A 191 IDGDTKGW-FSDNTPERFRAYGWHVIENVDGHDFVAIEK----AINEAHSQQQKPTLICCKTVIGFGSPEKAGTASVHGS 265 (663)
T ss_dssp ---CGGGT-CCCCHHHHHHHTTCEEEEEEETTCHHHHHH----HHHHHHHCSSSCEEEEEECCTTTTCTTTTTCSSTTSS
T ss_pred cccchhhh-cchhHHHHHHHCCCeEEEEEcCCCHHHHHH----HHHHHHhcCCCCEEEEEecccccccCCCCCCccccCC
Confidence 87665443 46799999999999999 999999988765 4555666 68999999999999999865 33322
Q ss_pred -CCHHHHHhHHH
Q 018048 340 -RDPGEHLVLVL 350 (361)
Q Consensus 340 -R~~~e~~~~~~ 350 (361)
.+++|++....
T Consensus 266 ~l~~e~~~~~~~ 277 (663)
T 3kom_A 266 PLSDQERASAAK 277 (663)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 36677665443
No 22
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.86 E-value=2e-21 Score=209.93 Aligned_cols=260 Identities=15% Similarity=0.035 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeeceeeecCCCchhHHHHHHHh-cC------CCcEEEcc-cCC---cchhhcCC
Q 018048 88 EGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKL-LK------KEDSVVST-YRD---HVHALSKG 156 (361)
Q Consensus 88 ~~~~ly~~M~~~R~~e~~~~~l~~~gk~~g~~~~~~GqEa~~vg~~~~-l~------~~D~v~~~-yR~---~~~~l~~g 156 (361)
++.+.+..-++...++.-.......+++.|+..++.|.--+.+.+... ++ ++|+|+.. |-. +++.+..|
T Consensus 76 ~l~~~la~~iR~~~i~~v~~a~~~~~~~gGH~gs~ls~ael~~~l~~~~~~~~~~~~~~D~V~~~GH~sp~~Ya~~~l~G 155 (886)
T 2qtc_A 76 ELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEG 155 (886)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSCCCCCSHHHHHHHHHHHHHHHHTCCCCCSSSCCCEEECCGGGHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCccCcCCcHHHHHHHHHHHHHhcCCCCCCCCCCEEEEcchhHHHHHHHHHHhC
Confidence 444333444433333332222223455656666555554444333333 55 46788775 333 22333455
Q ss_pred CCHHHHHHHHhcCcCCCcccCCCccccccccccccCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcc
Q 018048 157 VPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTC 236 (361)
Q Consensus 157 ~~~~~~~~el~~~~~g~~~gd~G~~h~~~~~~~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~ 236 (361)
.-..+-+..++.... ..|-.|..|....+..+...+|+||.++++|+|+|++.++..+.......++.|+|++|||++
T Consensus 156 r~~~e~l~~fRq~~~--~~gl~~~p~~~~~p~~~~~~tG~~G~g~s~AiG~A~a~~~l~~~~~~~~~~~~v~aviGDG~l 233 (886)
T 2qtc_A 156 RLTQEQLDNFRQEVH--GNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEM 233 (886)
T ss_dssp SSCHHHHTTBTCCTT--SSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHHTTSCCCTTCCEEEEEETGGG
T ss_pred CCCHHHHHhccCCCC--CCCCCCCCCcccCCCcccccccccCccHHHHHHHHHHhhhhcccccccCCCCEEEEEECCccc
Confidence 432222332222111 112233333222222355668999999999999999998743222112568999999999999
Q ss_pred cCcchHHHHHHhhhCCCC-eEEEEEcCCccccccccccc-CCcchhhccccCCccEEEE---------------------
Q 018048 237 NNGQFFECLNMAALWKLP-IVFVVENNLWAIGMSHLRAT-SDPQIYKKGPAFGMPGFHV--------------------- 293 (361)
Q Consensus 237 ~~g~~~eeL~tA~~~~LP-vi~VV~NN~y~is~~~~~q~-~~~d~~~~A~a~Gi~~~~V--------------------- 293 (361)
++|+++|+|++|++++|+ +|+||.||+|+|+.+..... ...++.++.+++|+++++|
T Consensus 234 ~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~~~~v~~g~~~~~ll~~~~~~~l~~~ 313 (886)
T 2qtc_A 234 DEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQL 313 (886)
T ss_dssp GSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEECBCTTHHHHHHHCSSCHHHHH
T ss_pred cccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCCEEEEecchhHHHHHccCCchHHHHH
Confidence 999999999999999997 99999999999987655432 3467899999999999998
Q ss_pred ------------------------------------------------eCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEE
Q 018048 294 ------------------------------------------------DGMDVLKVREVAKEAIERARRGEGPTLVECET 325 (361)
Q Consensus 294 ------------------------------------------------dg~D~~~v~~al~~Al~~ar~~~gP~lIev~t 325 (361)
||+|+.++++++++|.+. .++|+||+++|
T Consensus 314 ~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a~~~A~~~---~~~PtlI~~~T 390 (886)
T 2qtc_A 314 MNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQET---KGKATVILAHT 390 (886)
T ss_dssp HHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHHHHHHHHHHHHC---CSSCEEEEEEC
T ss_pred HHhccchhhhhhhhccchHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHHHHHHHHHHHHc---CCCCEEEEEee
Confidence 699999998877776542 35899999999
Q ss_pred ecCCCCCC--CCCC-----CCCCHHHHHhHHHhh
Q 018048 326 YRFRGHSL--ADPD-----ELRDPGEHLVLVLFI 352 (361)
Q Consensus 326 ~R~~gHs~--~Dp~-----~yR~~~e~~~~~~~~ 352 (361)
++.+||+. .++. .|++++|++.|...+
T Consensus 391 ~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r~~~ 424 (886)
T 2qtc_A 391 IKGYGMGDAAKGKNIAHQVKKMNMDGVRHIRDRF 424 (886)
T ss_dssp CTTTTCTTCC-------------CHHHHHHHHHT
T ss_pred eeccccchhhcCCccccCCCCCCHHHHHHHHHHc
Confidence 99999973 3333 378999998887553
No 23
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.84 E-value=6.9e-21 Score=201.26 Aligned_cols=155 Identities=25% Similarity=0.266 Sum_probs=123.7
Q ss_pred ccCCccccccccHHHHHHHHHHHHHHhhhhhc---CCCceEEEEECCCcccCcchHHHHHHhhhCCCC-eEEEEEcCCcc
Q 018048 190 LLGGFAFIGEGIPVATGAAFTSKYRREVLKEA---DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWA 265 (361)
Q Consensus 190 ~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~---~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP-vi~VV~NN~y~ 265 (361)
+...+|+||+++|+|+|+|+|.++++...... ..+++|+|++|||++++|+++|+|++|++++|| +|+|+.||+|+
T Consensus 135 v~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~~ 214 (690)
T 3m49_A 135 VDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSNDIS 214 (690)
T ss_dssp CCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSBC
T ss_pred cccCCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCCee
Confidence 34567999999999999999988775432211 137899999999999999999999999999998 88888999998
Q ss_pred cccccccccCCcchhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHc-CCCCEEEEEEEecCCCCCCC-CCCCC---
Q 018048 266 IGMSHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARR-GEGPTLVECETYRFRGHSLA-DPDEL--- 339 (361)
Q Consensus 266 is~~~~~q~~~~d~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~-~~gP~lIev~t~R~~gHs~~-Dp~~y--- 339 (361)
++..... ...+|+.+++++||+++++| ||+|+.++.+ |++++++ .++|+||+|+|++..|++.. ++..+
T Consensus 215 i~~~~~~-~~~~d~~~~~~a~G~~~~~v~DG~d~~~l~~----Al~~a~~~~~~P~lI~v~T~kG~G~~~~~~~~~~Hg~ 289 (690)
T 3m49_A 215 LDGDLNR-SFSESVEDRYKAYGWQVIRVEDGNDIEAIAK----AIEEAKADEKRPTLIEVRTTIGFGSPNKSGKSASHGS 289 (690)
T ss_dssp SSSBGGG-TCCCCHHHHHHHHTCEEEEESCTTCHHHHHH----HHHHHHHCCSSCEEEEEECCTTTTCTTTTTSGGGTSS
T ss_pred cccchhh-ccchhHHHHHHHcCCcEEEEecCCCHHHHHH----HHHHHHhcCCCCEEEEEEeecccccCcccCcccccCC
Confidence 8776543 34578999999999999999 9999888765 5556666 78999999999999999754 43322
Q ss_pred -CCHHHHHhHH
Q 018048 340 -RDPGEHLVLV 349 (361)
Q Consensus 340 -R~~~e~~~~~ 349 (361)
-+++|++...
T Consensus 290 ~~~~e~~~~~~ 300 (690)
T 3m49_A 290 PLGVEETKLTK 300 (690)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 2455555443
No 24
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.83 E-value=6.9e-21 Score=198.27 Aligned_cols=157 Identities=21% Similarity=0.247 Sum_probs=123.7
Q ss_pred CCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 157 VPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 157 ~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
+++..++.++....++ +...+.|++.+|. .+.++ ..+.|+||+++|+|+|+++| .+++
T Consensus 364 ~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala-----------~~~~ 432 (590)
T 1v5e_A 364 LQFYQVYNAINNHADEDAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNT-----------YPDR 432 (590)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEECSSHHHHGGGGTCCCCTTSEEECCCSSCCTTCHHHHHHHHHHH-----------CTTS
T ss_pred cCHHHHHHHHHhhCCCCCEEEECCchHHHHHHHhcccCCCCeEEcCCCCCcccChHHHHHHHHHh-----------CCCC
Confidence 6788899888887763 4567778765553 23344 35789999999999999999 6889
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccccc---------cCCcchhhccccCCccEEEEeC
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLRA---------TSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~~q---------~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+.. ...+|+.++|++||+++++|++
T Consensus 433 ~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~ 510 (590)
T 1v5e_A 433 QVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNLFGVDFTDVDYAKIAEAQGAKGFTVSR 510 (590)
T ss_dssp CEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCSCCCCCCCCCCHHHHHHHTTSEEEEECB
T ss_pred eEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCCCccccCCCCCHHHHHHHcCCEEEEECC
Confidence 99999999999998 8999999999999999998885 6554321111 2357999999999999999985
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCC
Q 018048 296 MDVLKVREVAKEAIERARRGEGPTLVECETYRFR 329 (361)
Q Consensus 296 ~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~ 329 (361)
+.++.+++++|++.++. ++|+||||.|+|..
T Consensus 511 --~~el~~al~~a~~~~~~-~gp~liev~~~~~~ 541 (590)
T 1v5e_A 511 --IEDMDRVMAEAVAANKA-GHTVVIDCKITQDR 541 (590)
T ss_dssp --HHHHHHHHHHHHHHHHT-TCCEEEEEECCSCC
T ss_pred --HHHHHHHHHHHHHhcCC-CCCEEEEEEecccc
Confidence 45777777776665443 89999999999865
No 25
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.82 E-value=6.3e-21 Score=197.61 Aligned_cols=153 Identities=16% Similarity=0.211 Sum_probs=119.5
Q ss_pred CCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 157 VPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 157 ~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
+++..++.++....+. ++..+.|.+.+|. .+.++ .++.|+||+++|+|+|+++| .+++
T Consensus 371 l~~~~v~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala-----------~~~~ 439 (566)
T 1ozh_A 371 LHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIARYLYTFRARQVMISNGQQTMGVALPWAIGAWLV-----------NPER 439 (566)
T ss_dssp BCHHHHHHHHHHHCCTTEEEEECSSHHHHHHHHTGGGCCCSEEECCCTTCCTTCHHHHHHHHHHH-----------STTS
T ss_pred cCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhcccCCCCeEEeCCCcccccchHHHHHHHHHh-----------CCCC
Confidence 6788888888877653 4556777654432 23333 46789999999999999999 6789
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc---------cccCCcchhhccccCCccEEEEeC
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL---------RATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~---------~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+ .....+|+.++|++||+++++|++
T Consensus 440 ~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~ 517 (566)
T 1ozh_A 440 KVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQRLSGVEFGPMDFKAYAESFGAKGFAVES 517 (566)
T ss_dssp EEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHTTTSEEEECCS
T ss_pred CEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCCCccCcCCCCCHHHHHHHcCCeEEEeCC
Confidence 99999999999997 8999999999999999998886 65432111 123457999999999999999987
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecC
Q 018048 296 MDVLKVREVAKEAIERARRGEGPTLVECETYRF 328 (361)
Q Consensus 296 ~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~ 328 (361)
.+ + ++++++++++.++|+||||.|+|.
T Consensus 518 ~~--e----l~~al~~a~~~~gp~liev~~~~~ 544 (566)
T 1ozh_A 518 AE--A----LEPTLRAAMDVDGPAVVAIPVDYR 544 (566)
T ss_dssp GG--G----HHHHHHHHHHSSSCEEEEEEBCCT
T ss_pred HH--H----HHHHHHHHHhCCCCEEEEEEeCCC
Confidence 65 4 455666666778999999999874
No 26
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.82 E-value=1.3e-20 Score=194.41 Aligned_cols=155 Identities=21% Similarity=0.270 Sum_probs=119.1
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 224 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~ 224 (361)
.+++..++..+....++ ++..+.|.+.+|. .+.++ .++.|+||+++|+|+|+++| .++
T Consensus 356 ~~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~AiGaala-----------~~~ 424 (549)
T 3eya_A 356 AIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQAT-----------EPE 424 (549)
T ss_dssp CBCHHHHHHHHHHHSCTTCEEEECTTHHHHHHHHHCCCCSSCEEECCTTTCCTTCHHHHHHHHHHH-----------STT
T ss_pred CcCHHHHHHHHHhhCCCCCEEEEcCcHHHHHHHHhCccCCCCcEEeCCCCchhhhHHHHHHHHHHh-----------CCC
Confidence 36778888887776653 4556777654442 13334 35789999999999999999 688
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-ccccccccc---------ccCCcchhhccccCCccEEEEe
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLR---------ATSDPQIYKKGPAFGMPGFHVD 294 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~~---------q~~~~d~~~~A~a~Gi~~~~Vd 294 (361)
++|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+. ....+|+.++|++||+++++|+
T Consensus 425 ~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~ 502 (549)
T 3eya_A 425 RQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVE 502 (549)
T ss_dssp SCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC------------CCBCCCCCHHHHHHHTTSEEEEEC
T ss_pred CcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCCCcCCcCCCCCHHHHHHHcCCcEEEeC
Confidence 999999999999998 8999999999999888888886 544211111 1235799999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCC
Q 018048 295 GMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 329 (361)
Q Consensus 295 g~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~ 329 (361)
+.+ + ++++++++++.+||+||||.|++..
T Consensus 503 ~~~--~----l~~al~~a~~~~gp~liev~~~~~~ 531 (549)
T 3eya_A 503 KAS--E----VDEALQRAFSIDGPVLVDVVVAKEE 531 (549)
T ss_dssp SGG--G----HHHHHHHHHHSSSCEEEEEEBCCCC
T ss_pred CHH--H----HHHHHHHHHhCCCCEEEEEEecccc
Confidence 665 4 4566667777899999999998754
No 27
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.82 E-value=8.8e-21 Score=198.28 Aligned_cols=158 Identities=20% Similarity=0.192 Sum_probs=124.9
Q ss_pred CCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 157 VPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 157 ~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
+++..++.+|...+++ +..++.|++.+|. .++.+ .+++|+||+++|+|+|+++| .+++
T Consensus 393 ~~~~~~~~~L~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~g~~G~~G~~l~~AiGaala-----------~~~~ 461 (616)
T 2pan_A 393 VKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAA-----------DPKR 461 (616)
T ss_dssp BCHHHHHHHHHHHSCTTEEEEECSSHHHHHHHHHCCCCSTTSEEECTTTCCTTCHHHHHHHHHHH-----------CTTC
T ss_pred cCHHHHHHHHHHhCCCCcEEEEcCcHHHHHHHHhcccCCCCeEEcCCCcccccchHHHHHHHHHh-----------CCCC
Confidence 6888899988887764 4667777655443 23333 46789999999999999999 6889
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc-------------c---ccC----Ccchhhccc
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL-------------R---ATS----DPQIYKKGP 284 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~-------------~---q~~----~~d~~~~A~ 284 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+ . ... .+|+.++|+
T Consensus 462 ~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~ 539 (616)
T 2pan_A 462 NVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAE 539 (616)
T ss_dssp EEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHH
T ss_pred cEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCCccccccccccccccCCCCCCCHHHHHH
Confidence 99999999999998 8999999999999988888886 65432100 0 111 379999999
Q ss_pred cCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCC
Q 018048 285 AFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 329 (361)
Q Consensus 285 a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~ 329 (361)
+||+++++|++.+ ++.+++++|++++++.++|+||||.|+|..
T Consensus 540 a~G~~~~~v~~~~--el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 540 GLGCKAIRVFKPE--DIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp HTTCEEEEECSGG--GHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred HcCCeEEEECCHH--HHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 9999999998654 777777777776666789999999999865
No 28
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.81 E-value=9.7e-21 Score=194.39 Aligned_cols=153 Identities=20% Similarity=0.298 Sum_probs=120.4
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 224 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~ 224 (361)
.+++..++.++...+++ ++..+.|++..|. .+.++ ..+ |+||+++|+|+|+++| .++
T Consensus 352 ~~~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~g-g~~G~~l~~A~G~a~a-----------~~~ 419 (528)
T 1q6z_A 352 RLHPETVFDTLNDMAPENAIYLNESTSTTAQMWQRLNMRNPGSYYFCAA-GGLGFALPAAIGVQLA-----------EPE 419 (528)
T ss_dssp SBCHHHHHHHHHHHSCTTCEEEEECTTSHHHHHHHCCCCSSSCEEECTT-CCTTSHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHhhCCCCeEEEECCcccHHHHHHhccccCCCcEECCCC-ccccchHHHHHHHHHh-----------CCC
Confidence 36788999998887763 4566777654432 12333 245 9999999999999999 678
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-ccccccccc----------ccCCcchhhccccCCccEEEE
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLR----------ATSDPQIYKKGPAFGMPGFHV 293 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~~----------q~~~~d~~~~A~a~Gi~~~~V 293 (361)
++|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+. ....+|+.++|++||+++++|
T Consensus 420 ~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v 497 (528)
T 1q6z_A 420 RQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVPGLDVPGIDFRALAKGYGVQALKA 497 (528)
T ss_dssp SCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCCSCBCCCCCHHHHHHHHTCEEEEE
T ss_pred CcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCeEEEe
Confidence 899999999999999 9999999999999999998886 665322110 114579999999999999999
Q ss_pred eCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecC
Q 018048 294 DGMDVLKVREVAKEAIERARRGEGPTLVECETYRF 328 (361)
Q Consensus 294 dg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~ 328 (361)
++.+ +++++++++++.++|+||||.|++.
T Consensus 498 ~~~~------~l~~al~~a~~~~gp~liev~~~~~ 526 (528)
T 1q6z_A 498 DNLE------QLKGSLQEALSAKGPVLIEVSTVSP 526 (528)
T ss_dssp SSHH------HHHHHHHHHHTCSSCEEEEEEBCC-
T ss_pred CCHH------HHHHHHHHHHHCCCcEEEEEEecCC
Confidence 8764 4567777788889999999999763
No 29
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.81 E-value=1.4e-20 Score=199.08 Aligned_cols=156 Identities=21% Similarity=0.314 Sum_probs=119.1
Q ss_pred CCCHHHHHHHHhcCc---CC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhc
Q 018048 156 GVPARAVMSELFGKA---TG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEA 221 (361)
Q Consensus 156 g~~~~~~~~el~~~~---~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~ 221 (361)
.+++..++.+|.... ++ ++..+.|++.+|. .+..+ .+++|+||+++|+|+|+++|
T Consensus 460 ~l~~~~v~~~L~~~l~~~~~~~iv~~~vg~~~~~~~~~~~~~~p~~~~~sg~~G~mG~~lpaAiGaalA----------- 528 (677)
T 1t9b_A 460 KIKPQTVIKKLSKVANDTGRHVIVTTGVGQHQMWAAQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVA----------- 528 (677)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCEEEEECSSHHHHHHHHHSCCCSTTCEECCCSSCCTTCHHHHHHHHHHH-----------
T ss_pred CcCHHHHHHHHHHHhhcCCCCEEEEeCCchHHHHHHHhcccCCCCeEEeCCCcchhhchHHHHHHHHHh-----------
Confidence 367888888877765 32 3445566554443 23344 46789999999999999999
Q ss_pred CCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc----------cccCCcchhhccccCCccE
Q 018048 222 DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL----------RATSDPQIYKKGPAFGMPG 290 (361)
Q Consensus 222 ~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~----------~q~~~~d~~~~A~a~Gi~~ 290 (361)
.++++|||++|||+|+|+ ++||+||+++++|+++||.||+ |++....+ .....+||.++|++||+++
T Consensus 529 ~p~~~Vv~i~GDGsf~~~--~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~G~~~ 606 (677)
T 1t9b_A 529 KPESLVIDIDGDASFNMT--LTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAMGLKG 606 (677)
T ss_dssp CTTSEEEEEEEHHHHHHH--GGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHTTCEE
T ss_pred CCCCeEEEEEeehHHhcc--HHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHcCCeE
Confidence 689999999999999997 8899999999999988888886 55422110 0124579999999999999
Q ss_pred EEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCC
Q 018048 291 FHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 330 (361)
Q Consensus 291 ~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~g 330 (361)
++|++. .+ ++++++++++.++|+||||.|+|...
T Consensus 607 ~~v~~~--~e----l~~al~~a~~~~gp~lIev~~~~~~~ 640 (677)
T 1t9b_A 607 LRVKKQ--EE----LDAKLKEFVSTKGPVLLEVEVDKKVP 640 (677)
T ss_dssp EEECSH--HH----HHHHHHHHHHCSSCEEEEEEBCSSCC
T ss_pred EEECCH--HH----HHHHHHHHHHCCCcEEEEEEecCCcc
Confidence 999754 35 45566666677899999999998654
No 30
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.81 E-value=1.4e-20 Score=195.79 Aligned_cols=157 Identities=22% Similarity=0.303 Sum_probs=121.3
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 224 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~ 224 (361)
.+++..++.++....++ ++..+.|++.+|. .++.+ .+++|+||+++|+|+|+++| .++
T Consensus 376 ~l~~~~~~~~l~~~lp~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~g~~G~~G~~l~~AiGaala-----------~~~ 444 (590)
T 1ybh_A 376 AIPPQYAIKVLDELTDGKAIISTGVGQHQMWAAQFYNYKKPRQWLSSGGLGAMGFGLPAAIGASVA-----------NPD 444 (590)
T ss_dssp BCCHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHSCCCSSTTSEECCCSSCCTTCHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhcccCCCCeEEeCCCcccccchHHHHHHHHHh-----------CCC
Confidence 36888999988887763 4566777654442 23343 46679999999999999999 678
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc----------cc--c------CCcchhhcccc
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL----------RA--T------SDPQIYKKGPA 285 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~----------~q--~------~~~d~~~~A~a 285 (361)
++|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+ .. . ..+|+.++|++
T Consensus 445 ~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a 522 (590)
T 1ybh_A 445 AIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAA 522 (590)
T ss_dssp SCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHH
T ss_pred CcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCCccccccccccccccCCCCCHHHHHHH
Confidence 999999999999998 8999999999999888888886 65432110 00 1 14699999999
Q ss_pred CCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCC
Q 018048 286 FGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGH 331 (361)
Q Consensus 286 ~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gH 331 (361)
||+++++|++. .+ ++++++++++.++|+||||.|+|....
T Consensus 523 ~G~~~~~v~~~--~e----l~~al~~a~~~~gp~liev~~~~~~~~ 562 (590)
T 1ybh_A 523 CGIPAARVTKK--AD----LREAIQTMLDTPGPYLLDVICPHQEHV 562 (590)
T ss_dssp TTCCEEEECBH--HH----HHHHHHHHHHSSSCEEEEEECCTTCCC
T ss_pred cCCeEEEeCCH--HH----HHHHHHHHHhCCCCEEEEEEecCCccc
Confidence 99999999754 34 456666666778999999999987643
No 31
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.81 E-value=1.9e-20 Score=194.84 Aligned_cols=157 Identities=21% Similarity=0.255 Sum_probs=122.6
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 224 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~ 224 (361)
.+++..++.++....+. ++..+.|.+.+|. .+.++ ..+.|+||+++|+|+|+++| .++
T Consensus 374 ~l~~~~~~~~l~~~l~~~~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaala-----------~~~ 442 (589)
T 2pgn_A 374 PASMFRAMAEVRKVQRPEDIIVTDIGNHTLPMFGGAILQRPRRLVTSMAEGILGCGFPMALGAQLA-----------EPN 442 (589)
T ss_dssp SCCHHHHHHHHHHTCCTTCEEEECSSTTHHHHHHHCCCSSTTCEESCTTTCCTTCHHHHHHHHHHH-----------CTT
T ss_pred CcCHHHHHHHHHHhCCCCCEEEEcCchHHHHHHHhcccCCCCcEECCCCcchhhhHHHHHHHHHHh-----------CCC
Confidence 36888999999887763 4566777654442 23344 34679999999999999999 678
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc---------cccCCcchhhccccCCccEEEEe
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL---------RATSDPQIYKKGPAFGMPGFHVD 294 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~---------~q~~~~d~~~~A~a~Gi~~~~Vd 294 (361)
++|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+ .....+|+.++|++||+++++|+
T Consensus 443 ~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~ 520 (589)
T 2pgn_A 443 SRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQNNWTEFMNPDWVGIAKAFGAYGESVR 520 (589)
T ss_dssp SCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSCCSCBCCCCCHHHHHHHHTCEEEECT
T ss_pred CcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCCccccCCCCCHHHHHHHCCCeEEEEC
Confidence 999999999999998 7999999999999999998887 55432211 12235799999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCC
Q 018048 295 GMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGH 331 (361)
Q Consensus 295 g~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gH 331 (361)
+.+ ++ +++++++++.++|+||||.|+|..+.
T Consensus 521 ~~~--el----~~al~~a~~~~gp~liev~~~~~~~~ 551 (589)
T 2pgn_A 521 ETG--DI----AGALQRAIDSGKPALIEIPVSKTQGL 551 (589)
T ss_dssp TTC--CH----HHHHHHHHHHCSCEEEEEECCSSSST
T ss_pred CHH--HH----HHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 776 44 55555666678999999999986543
No 32
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.80 E-value=2e-20 Score=194.03 Aligned_cols=153 Identities=22% Similarity=0.228 Sum_probs=119.2
Q ss_pred CCCHHHHHHHHhcCcC-------CCcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhh
Q 018048 156 GVPARAVMSELFGKAT-------GCCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLK 219 (361)
Q Consensus 156 g~~~~~~~~el~~~~~-------g~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~ 219 (361)
.+++..++.++....+ .++..+.|.+.+|. .+.++ .++.|+||+++|+|+|+++|
T Consensus 381 ~~~~~~~~~~l~~~l~~~~~~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~mG~~l~~AiGaa~a--------- 451 (573)
T 2iht_A 381 GMRVHQVIDSMNTVMEEAAEPGEGTIVSDIGFFRHYGVLFARADQPFGFLTSAGCSSFGYGIPAAIGAQMA--------- 451 (573)
T ss_dssp SBCHHHHHHHHHHHHHHHSCTTCCEEEECSSHHHHHHHHHCCCCSTTSEECCSSSCCTTCHHHHHHHHHHH---------
T ss_pred CcCHHHHHHHHHHhcccccCCCCcEEEEcCcHhHHHHHHhcCcCCCCeEEcCCCCcccccHHHHHHHHHHh---------
Confidence 3678888888776653 34566777655432 13343 45789999999999999999
Q ss_pred hcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-ccccccc---------c--cccCCcchhhccccCC
Q 018048 220 EADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSH---------L--RATSDPQIYKKGPAFG 287 (361)
Q Consensus 220 ~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~---------~--~q~~~~d~~~~A~a~G 287 (361)
.++++|||++|||+|+|+ +++|+||+++++|+++||.||+ |++.... . .....+|+.++|++||
T Consensus 452 --~~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G 527 (573)
T 2iht_A 452 --RPDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHRSHDPAVKFGGVDFVALAEANG 527 (573)
T ss_dssp --STTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSSCCGGGTBCCCCCHHHHHHHTT
T ss_pred --CCCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCCCcCccccCCCCCHHHHHHHcC
Confidence 678999999999999998 8999999999999988888886 6553321 0 2233579999999999
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 018048 288 MPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 327 (361)
Q Consensus 288 i~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R 327 (361)
+++++|++.+ + ++++++++++.+||+||||.|+|
T Consensus 528 ~~~~~v~~~~--~----l~~al~~a~~~~gp~liev~~~~ 561 (573)
T 2iht_A 528 VDATRATNRE--E----LLAALRKGAELGRPFLIEVPVNY 561 (573)
T ss_dssp CEEEECCSHH--H----HHHHHHHHHTSSSCEEEEEEBCC
T ss_pred CeEEEeCCHH--H----HHHHHHHHHhCCCCEEEEEECCC
Confidence 9999997543 4 56677777778899999999988
No 33
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.80 E-value=2.8e-20 Score=192.47 Aligned_cols=155 Identities=18% Similarity=0.291 Sum_probs=118.9
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc-------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS-------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCD 224 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~-------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~ 224 (361)
.+++..++.++....+. +...+.|++.+|. .+.++ .++.|+||+++|+|+|+++|.+ . ++
T Consensus 369 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~g~g~~G~~l~~AiGaa~a~~-~--------~~ 439 (563)
T 2uz1_A 369 ALHPFHASQVIAKHVDAGVTVVADGALTYLWLSEVMSRVKPGGFLCHGYLGSMGVGFGTALGAQVADL-E--------AG 439 (563)
T ss_dssp SCCHHHHHHHHHTTCSTTEEEEECSSHHHHHHHHHHTTSCCSEEECCCTTCCTTTHHHHHHHHHHHHH-H--------HT
T ss_pred CcCHHHHHHHHHHhCCCCcEEEEcCchHHHHHHHhccccCCCeEECCCCCccccChHHHHHHHHHHhh-C--------CC
Confidence 46888999999888764 4567777654432 23333 3567999999999999999953 1 57
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc-------cc----cCCcchhhccccCCccEEE
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL-------RA----TSDPQIYKKGPAFGMPGFH 292 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~-------~q----~~~~d~~~~A~a~Gi~~~~ 292 (361)
++|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+ .. ...+|+.++|++||+++++
T Consensus 440 ~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~ 517 (563)
T 2uz1_A 440 RRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYH 517 (563)
T ss_dssp CEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHTTCEEEE
T ss_pred CeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHcCCeEEE
Confidence 899999999999998 8899999999999988888886 65533211 11 1347999999999999999
Q ss_pred EeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 018048 293 VDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 327 (361)
Q Consensus 293 Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R 327 (361)
|++. .++ +++++++++.++|+||||.|++
T Consensus 518 v~~~--~~l----~~al~~a~~~~gp~liev~~~~ 546 (563)
T 2uz1_A 518 VDSV--ESF----SAALAQALAHNRPACINVAVAL 546 (563)
T ss_dssp ECSH--HHH----HHHHHHHHHSSSCEEEEEECCS
T ss_pred eCCH--HHH----HHHHHHHHHCCCCEEEEEEecc
Confidence 9754 354 5566666667899999999974
No 34
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.79 E-value=4.9e-20 Score=190.02 Aligned_cols=152 Identities=14% Similarity=0.108 Sum_probs=118.9
Q ss_pred CCHHHHHHHHhcCcCC--CcccCCCcccccc------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCce
Q 018048 157 VPARAVMSELFGKATG--CCRGQGGSMHMFS------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHV 226 (361)
Q Consensus 157 ~~~~~~~~el~~~~~g--~~~gd~G~~h~~~------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~ 226 (361)
+++..++.+|....++ ++..+.|...+.. .+.++ .++.|+||+++|+|+|+++| .++++
T Consensus 360 ~~~~~~~~~l~~~l~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~a~a-----------~~~~~ 428 (552)
T 1ovm_A 360 LTQENFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTA-----------CPNRR 428 (552)
T ss_dssp CCHHHHHHHHHHHCCTTCEEEECTTHHHHHHTTCCCCSSCEEECCTTTCCTTHHHHHHHHHHHH-----------CTTSC
T ss_pred cCHHHHHHHHHHhcCCCCEEEECCchHHHHHHhcccCCCCeEEechhhHhhhhHHHHHHHHHHh-----------CCCCc
Confidence 6888999988877753 4566777643221 12233 46789999999999999999 67899
Q ss_pred EEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc------cccCCcchhhccccCCc----cEEEEeC
Q 018048 227 TLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL------RATSDPQIYKKGPAFGM----PGFHVDG 295 (361)
Q Consensus 227 Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~------~q~~~~d~~~~A~a~Gi----~~~~Vdg 295 (361)
|||++|||+|+|+ +++|.||+++++|+++||.||+ |++..... .....+|+.++|++||+ ++++|++
T Consensus 429 vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~v~~ 506 (552)
T 1ovm_A 429 VIVLTGDGAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECWRVSE 506 (552)
T ss_dssp EEEEEEHHHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGSTTTSCSSCCEEEEEECB
T ss_pred EEEEECchHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCcccCCCCCHHHHHHHhCCCcCCCEEEeCC
Confidence 9999999999988 8999999999999888888886 66542111 12245799999999999 9999986
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 018048 296 MDVLKVREVAKEAIERARRGEGPTLVECETYR 327 (361)
Q Consensus 296 ~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R 327 (361)
.+ + ++++++++++.++|+||||.|++
T Consensus 507 ~~--~----l~~al~~a~~~~gp~liev~~~~ 532 (552)
T 1ovm_A 507 AE--Q----LADVLEKVAHHERLSLIEVMLPK 532 (552)
T ss_dssp HH--H----HHHHHHHHTTCSSEEEEEEECCT
T ss_pred HH--H----HHHHHHHHHhCCCCEEEEEEcCc
Confidence 54 4 56677777778899999999976
No 35
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.79 E-value=5.8e-20 Score=190.33 Aligned_cols=154 Identities=14% Similarity=0.111 Sum_probs=118.3
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
.+++..++.++....++ ++..|.|+..+.. .+.++ .+++|+||+++|+|+|+++| .+++
T Consensus 376 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala-----------~~~~ 444 (570)
T 2vbf_A 376 PLSQDRLWQAVESLTQSNETIVAEQGTSFFGASTIFLKSNSRFIGQPLWGSIGYTFPAALGSQIA-----------DKES 444 (570)
T ss_dssp BCCHHHHHHHHHHHCCSSEEEEECTTHHHHHHTTSCCCTTCEEECCTTTCCTTTHHHHHHHHHHH-----------CTTS
T ss_pred CcCHHHHHHHHHHhcCCCCEEEEeCCHHHHHHHhcccCCCCeEecCccchhhhhhHHHHHHHHHh-----------CCCC
Confidence 46788999998887763 4566777643221 12233 36789999999999999999 6889
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc------cccCCcchhhccccCCcc-----EEEE
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL------RATSDPQIYKKGPAFGMP-----GFHV 293 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~------~q~~~~d~~~~A~a~Gi~-----~~~V 293 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++..... .....+|+.++|++||++ +++|
T Consensus 445 ~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v 522 (570)
T 2vbf_A 445 RHLLFIGDGSLQLT--VQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSYNDIPMWNYSKLPETFGATEDRVVSKIV 522 (570)
T ss_dssp EEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCCTTTEEEEEE
T ss_pred cEEEEEcchhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCccCCCCCCHHHHHHHcCCCcCCcceEEe
Confidence 99999999999997 8999999999999888888775 66532111 112457999999999999 8999
Q ss_pred eCCCHHHHHHHHHHHHHH-HHcCCCCEEEEEEEecC
Q 018048 294 DGMDVLKVREVAKEAIER-ARRGEGPTLVECETYRF 328 (361)
Q Consensus 294 dg~D~~~v~~al~~Al~~-ar~~~gP~lIev~t~R~ 328 (361)
++.+ + +++++++ +++.++|+||||.|+|.
T Consensus 523 ~~~~--e----l~~al~~a~~~~~~p~liev~~~~~ 552 (570)
T 2vbf_A 523 RTEN--E----FVSVMKEAQADVNRMYWIELVLEKE 552 (570)
T ss_dssp CBHH--H----HHHHHHHHHHCTTSEEEEEEECCTT
T ss_pred cCHH--H----HHHHHHHHHhcCCCcEEEEEEcCcc
Confidence 7643 4 4556665 46788999999999864
No 36
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.78 E-value=9.3e-20 Score=188.74 Aligned_cols=152 Identities=16% Similarity=0.122 Sum_probs=112.2
Q ss_pred CCHHHHHHHHhcCc--C-C-CcccCCCccccc-------cccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCC
Q 018048 157 VPARAVMSELFGKA--T-G-CCRGQGGSMHMF-------SKEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADC 223 (361)
Q Consensus 157 ~~~~~~~~el~~~~--~-g-~~~gd~G~~h~~-------~~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~ 223 (361)
+++..++..+.... + + +...++|+...+ ..+.++ .+++|+||+++|+|+|+++| +
T Consensus 375 ~~~~~~~~~l~~~l~~~~~~iv~~dg~~~~~~~~~~~~~~~p~~~~~~g~~g~~G~~l~~AiGaala------------~ 442 (568)
T 2c31_A 375 MNYSNSLGVVRDFMLANPDISLVNEGANALDNTRMIVDMLKPRKRLDSGTWGVMGIGMGYCVAAAAV------------T 442 (568)
T ss_dssp BCHHHHHHHHHHHHHHCCSSEEEEESSHHHHHHHHHCCCCSTTCEEESTTTTCSSCHHHHHHHHHHH------------H
T ss_pred cCHHHHHHHHHHHhcCCCCeEEEECChhHHHHHHHHhcccCCCeEEcCCCCccccccHHHHHHHHhC------------C
Confidence 56777777777665 4 2 344454432211 112222 56789999999999999998 4
Q ss_pred CceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-c-ccccccc---c-----ccCCcchhhccccCCccEEEE
Q 018048 224 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-W-AIGMSHL---R-----ATSDPQIYKKGPAFGMPGFHV 293 (361)
Q Consensus 224 ~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y-~is~~~~---~-----q~~~~d~~~~A~a~Gi~~~~V 293 (361)
+++|||++|||+|+|+ +++|+|++++++|+++||.||+ | .+ ...+ . ....+||.++|++||+++++|
T Consensus 443 ~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v 519 (568)
T 2c31_A 443 GKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKG-NEADPQPGVISCTRLTRGRYDMMMEAFGGKGYVA 519 (568)
T ss_dssp CSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCS-CCCCSBTTBCCTTBCCCCCHHHHHHTTTCEEEEE
T ss_pred CCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHH-HHHHhhcCCcccCcCCCCCHHHHHHHcCCeEEEe
Confidence 7889999999999998 8999999999999999999997 2 22 1111 0 034579999999999999999
Q ss_pred eCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCC
Q 018048 294 DGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 329 (361)
Q Consensus 294 dg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~ 329 (361)
++. .++ +++++++++.++|+||||.|+|..
T Consensus 520 ~~~--~el----~~al~~a~~~~~p~liev~~~~~~ 549 (568)
T 2c31_A 520 NTP--AEL----KAALEEAVASGKPCLINAMIDPDA 549 (568)
T ss_dssp SSH--HHH----HHHHHHHHHHTSCEEEEEEBCTTS
T ss_pred CCH--HHH----HHHHHHHHhCCCCEEEEEEecccc
Confidence 754 455 455555556789999999998753
No 37
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.78 E-value=4.3e-20 Score=191.32 Aligned_cols=154 Identities=18% Similarity=0.206 Sum_probs=117.4
Q ss_pred CCCHHHHHHHHhcCcCC----Cc-ccCCCcccccc---ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 156 GVPARAVMSELFGKATG----CC-RGQGGSMHMFS---KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g----~~-~gd~G~~h~~~---~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
.+++..++.++....++ +. ..|.|+..++. .+..+ .+++|+||+++|+|+|+++| .+++
T Consensus 373 ~l~~~~v~~~l~~~l~~~~~~iv~~~d~G~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~ala-----------~~~~ 441 (565)
T 2nxw_A 373 PIAPMDIARAVNDRVRAGQEPLLIAADMGDCLFTAMDMIDAGLMAPGYYAGMGFGVPAGIGAQCV-----------SGGK 441 (565)
T ss_dssp BCCHHHHHHHHHHHHHTTCCCCEEEECSSHHHHHHTTSCCSCEECCTTTCCTTCHHHHHHHHHHH-----------TTTC
T ss_pred ccCHHHHHHHHHHhcccccCCEEEEecchHHHHHHHhCCCcEEEccCccccccccchHHHHHHHh-----------CCCC
Confidence 36788888888776543 44 67777643221 23333 45689999999999999999 6789
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc-----cccCCcchhhccccCCccEEEEeCCCHH
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL-----RATSDPQIYKKGPAFGMPGFHVDGMDVL 299 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~-----~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~ 299 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+ .....+|+.++|++||+++++|++.+
T Consensus 442 ~vv~i~GDG~~~~~--~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~-- 517 (565)
T 2nxw_A 442 RILTVVGDGAFQMT--GWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGMGGDGVRVRTRA-- 517 (565)
T ss_dssp CEEEEEEHHHHHHH--GGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGGTSEEEEECBHH--
T ss_pred cEEEEEechHHHhh--HHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHcCCCEEEeCCHH--
Confidence 99999999999988 9999999999999888888886 55421111 12245799999999999999998653
Q ss_pred HHHHHHHHHHHHHHcCCCCE-EEEEEEecC
Q 018048 300 KVREVAKEAIERARRGEGPT-LVECETYRF 328 (361)
Q Consensus 300 ~v~~al~~Al~~ar~~~gP~-lIev~t~R~ 328 (361)
+ ++++++++++.++|+ ||||.|++.
T Consensus 518 e----l~~al~~a~~~~gp~~liev~~~~~ 543 (565)
T 2nxw_A 518 E----LKAALDKAFATRGRFQLIEAMIPRG 543 (565)
T ss_dssp H----HHHHHHHHHHCCSSCEEEEEECCTT
T ss_pred H----HHHHHHHHHhcCCCeEEEEEEcccc
Confidence 4 455666666677898 999999763
No 38
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.78 E-value=6.7e-20 Score=189.52 Aligned_cols=158 Identities=16% Similarity=0.117 Sum_probs=119.5
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
.+++..++.+|....++ ++..+.|+..++. .+.++ .++.|+||+++|+|+|+++|.+.+ +.++
T Consensus 364 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~Gaala~~~~-------~~~~ 436 (563)
T 2vk8_A 364 PLKQEWMWNQLGNFLQEGDVVIAETGTSAFGINQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEI-------DPKK 436 (563)
T ss_dssp BCCHHHHHHHHTTTCCTTCEEEECTTHHHHHGGGSCCCSSCEEECCTTTCCTTHHHHHHHHHHHHHHHH-------CTTC
T ss_pred CcCHHHHHHHHHHhCCCCCEEEECCchHHHHHhhcCcCCCCeEEcccchhhhhhHHHHHHHHHHhCccc-------CCCC
Confidence 37899999999988763 4566777543221 12233 467899999999999999997654 4568
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc------cccCCcchhhccccCCcc---EEEEeC
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL------RATSDPQIYKKGPAFGMP---GFHVDG 295 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~------~q~~~~d~~~~A~a~Gi~---~~~Vdg 295 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++..... .....+||.++|++||++ +++|++
T Consensus 437 ~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~v~~ 514 (563)
T 2vk8_A 437 RVILFIGDGSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQYNEIQGWDHLSLLPTFGAKDYETHRVAT 514 (563)
T ss_dssp CEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGGGCCCCCCGGGHHHHTTCSSEEEEEECB
T ss_pred CEEEEEcchHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCcccCCCCCHHHHHHHhCCCCCcEEEecC
Confidence 99999999999998 8999999999999988888886 66532111 112457999999999999 999986
Q ss_pred CCHHHHHHHHHHHHH-HHHcC-CCCEEEEEEEecC
Q 018048 296 MDVLKVREVAKEAIE-RARRG-EGPTLVECETYRF 328 (361)
Q Consensus 296 ~D~~~v~~al~~Al~-~ar~~-~gP~lIev~t~R~ 328 (361)
.+ + +.++++ ++++. ++|+||||.|++.
T Consensus 515 ~~--e----l~~al~~~a~~~~~~p~liev~~~~~ 543 (563)
T 2vk8_A 515 TG--E----WDKLTQDKSFNDNSKIRMIEVMLPVF 543 (563)
T ss_dssp HH--H----HHHHHTCTTTTSCSSEEEEEEECCTT
T ss_pred HH--H----HHHHHHHHHHhCCCCcEEEEEEeCcc
Confidence 43 4 455665 55554 4799999999763
No 39
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.78 E-value=6.5e-20 Score=189.84 Aligned_cols=154 Identities=21% Similarity=0.318 Sum_probs=118.3
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCcccccc------ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMFS------KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~~------~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
.+++..++.++....++ ++..+.|.+.+.. .+.++ .+++|+||+++|+|+|+++| .+++
T Consensus 360 ~l~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~mG~~l~~A~G~ala-----------~~~~ 428 (566)
T 2vbi_A 360 GLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPSAFGNAMG-----------SQDR 428 (566)
T ss_dssp CCCHHHHHHHHHHHCCTTEEEEECSSHHHHHHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHT-----------CTTS
T ss_pred ccCHHHHHHHHHHhcCCCCEEEECCchHHHhhhheECCCCCEEEecCcccchhhHHHHHHHHHHh-----------CCCC
Confidence 47889999998887763 4556677532111 12333 36789999999999999999 6789
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccccc----cccCCcchhhccccCCc-----cEEEEeC
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHL----RATSDPQIYKKGPAFGM-----PGFHVDG 295 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~----~q~~~~d~~~~A~a~Gi-----~~~~Vdg 295 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+ .....+|+.++|++||+ ++++|++
T Consensus 429 ~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~~ 506 (566)
T 2vbi_A 429 QHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKATT 506 (566)
T ss_dssp EEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCCCCCTTTHHHHHHTTTCCCEEEEECS
T ss_pred cEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccCCCCCCHHHHHHHcCCCCCCccEEEeCC
Confidence 99999999999997 8899999999999888888775 65533221 12245799999999999 9999985
Q ss_pred CCHHHHHHHHHHHHHHHHcC-CCCEEEEEEEecC
Q 018048 296 MDVLKVREVAKEAIERARRG-EGPTLVECETYRF 328 (361)
Q Consensus 296 ~D~~~v~~al~~Al~~ar~~-~gP~lIev~t~R~ 328 (361)
.+ + ++++++++++. +||+||||.|+|.
T Consensus 507 ~~--e----l~~al~~a~~~~~gp~liev~~~~~ 534 (566)
T 2vbi_A 507 PK--E----LTEAIARAKANTRGPTLIECQIDRT 534 (566)
T ss_dssp HH--H----HHHHHHHHHHCCSSCEEEEEECCTT
T ss_pred HH--H----HHHHHHHHHhcCCCcEEEEEEeCcc
Confidence 43 4 45566666666 8999999999874
No 40
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.77 E-value=1.4e-19 Score=187.41 Aligned_cols=154 Identities=19% Similarity=0.224 Sum_probs=118.3
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCccccc-----c-ccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCc
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMF-----S-KEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 225 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~-----~-~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~ 225 (361)
.+++..++.++....++ ++..|.|++.+. . .+.++ .+++++||+++|+|+|+++| .+++
T Consensus 364 ~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~~~~~~~~~~~~~~g~~G~~l~~A~G~ala-----------~~~~ 432 (568)
T 2wvg_A 364 PLVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVG-----------APER 432 (568)
T ss_dssp BCCHHHHHHHHHTTCCTTEEEEECSSHHHHHHHTCCCCTTCEEECCTTTCCTTTHHHHHHHHHHH-----------CTTS
T ss_pred ccCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHhhcccCCCCeEEeCCCcchhhhHHHHHHHHHHh-----------CCCC
Confidence 37899999999988764 456677753211 1 12333 46789999999999999999 6889
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-ccccccccc----ccCCcchhhccccCCc---------cEE
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSHLR----ATSDPQIYKKGPAFGM---------PGF 291 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~~~----q~~~~d~~~~A~a~Gi---------~~~ 291 (361)
+|||++|||+|+|+ +++|+||+++++|+++||.||+ |++....+. ....+|+.++|++||+ +++
T Consensus 433 ~vv~i~GDGs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~ 510 (568)
T 2wvg_A 433 RNILMVGDGSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGL 510 (568)
T ss_dssp EEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEE
T ss_pred cEEEEEcChhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcCCCCCCHHHHHHHhCCCcccccCCcceE
Confidence 99999999999997 8999999999999888888775 665332211 1245799999999999 899
Q ss_pred EEeCCCHHHHHHHHHHHHHHHHcC-CCCEEEEEEEecC
Q 018048 292 HVDGMDVLKVREVAKEAIERARRG-EGPTLVECETYRF 328 (361)
Q Consensus 292 ~Vdg~D~~~v~~al~~Al~~ar~~-~gP~lIev~t~R~ 328 (361)
+|++.+ ++ +++++++++. ++|+||||.|+|.
T Consensus 511 ~v~~~~--el----~~al~~a~~~~~gp~liev~~~~~ 542 (568)
T 2wvg_A 511 KAKTGG--EL----AEAIKVALANTDGPTLIECFIGRE 542 (568)
T ss_dssp EESBHH--HH----HHHHHHHHHCCSSCEEEEEECCTT
T ss_pred EeCCHH--HH----HHHHHHHHhcCCCcEEEEEEcCcc
Confidence 997543 54 5566666665 8999999999874
No 41
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.77 E-value=3.9e-19 Score=183.83 Aligned_cols=153 Identities=18% Similarity=0.164 Sum_probs=112.8
Q ss_pred CCCHHHHHHHHhcCc--C-C-CcccCCCccccc--------cccccc--cCCccccccccHHHHHHHHHHHHHHhhhhhc
Q 018048 156 GVPARAVMSELFGKA--T-G-CCRGQGGSMHMF--------SKEHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEA 221 (361)
Q Consensus 156 g~~~~~~~~el~~~~--~-g-~~~gd~G~~h~~--------~~~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~ 221 (361)
.+++..++.++.... + + ++..++++ +++ ..+.++ .+++|+||+++|+|+|+++|
T Consensus 369 ~~~~~~~~~~l~~~l~~~~d~ivv~dg~~-~~~~~~~~~~~~~p~~~~~~g~~g~~G~~l~~AiGaa~a----------- 436 (564)
T 2q28_A 369 PLNYFNALSAVRDVLRENQDIYLVNEGAN-TLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT----------- 436 (564)
T ss_dssp SBCHHHHHHHHHHHHTTCTTCEEEEESSH-HHHHHHHHSCCCSSSCEEESTTTTCTTCHHHHHHHHHHH-----------
T ss_pred CcCHHHHHHHHHHHhcCCCCEEEEECCch-HHHHHHHHhcccCCCeEecCCCCCcccchHHHHHHHhhc-----------
Confidence 367778888877765 3 2 34444443 221 112233 56789999999999999998
Q ss_pred CCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-c-ccccccc----c------ccCCcchhhccccCCcc
Q 018048 222 DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-W-AIGMSHL----R------ATSDPQIYKKGPAFGMP 289 (361)
Q Consensus 222 ~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y-~is~~~~----~------q~~~~d~~~~A~a~Gi~ 289 (361)
++++|||++|||+|+|+ .++|.||+++++|+++||.||+ | .+ ...+ . ....+||.++|++||++
T Consensus 437 -~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~ 512 (564)
T 2q28_A 437 -SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRG-DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGV 512 (564)
T ss_dssp -HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCS-CCCCTTSSCCCCTTBCCTTCCGGGGGGGGTCE
T ss_pred -CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHH-HHHHHhccCCccccccCCCCCHHHHHHHcCCe
Confidence 47889999999999997 7999999999999999999997 2 22 1111 0 01257999999999999
Q ss_pred EEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCC
Q 018048 290 GFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 330 (361)
Q Consensus 290 ~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~g 330 (361)
+++|++. .++ +++++++++.++|+||||.|+|...
T Consensus 513 ~~~v~~~--~el----~~al~~a~~~~~p~liev~~~~~~~ 547 (564)
T 2q28_A 513 GYNVTTT--DEL----RHALTTGIQSRKPTIINVVIDPAAG 547 (564)
T ss_dssp EEEECSH--HHH----HHHHHHHHHHTSCEEEEEEBCTTSS
T ss_pred EEEeCCH--HHH----HHHHHHHHhCCCCEEEEEEeccccC
Confidence 9999754 455 5555555567899999999987543
No 42
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.75 E-value=4e-19 Score=183.67 Aligned_cols=151 Identities=15% Similarity=0.102 Sum_probs=110.9
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCccc-c---c---cccccc---cCCccccccccHHHHHHHHHHHHHHhhhhhcCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMH-M---F---SKEHNL---LGGFAFIGEGIPVATGAAFTSKYRREVLKEADC 223 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h-~---~---~~~~~~---~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~ 223 (361)
.+++..++.++...+++ ++..+.+... . + .....+ .+..|+||+ +|+|+|+++| +
T Consensus 366 ~~~~~~~~~~l~~~l~~~~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~G~-l~~A~Gaa~a------------~ 432 (556)
T 3hww_A 366 AFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGL-LSTAAGVQRA------------S 432 (556)
T ss_dssp SSSHHHHHHTGGGTCCTTCEEEECSSHHHHHHHHHCCCCTTCCEEECCSSCCSSSH-HHHHHHHHHH------------H
T ss_pred CcCHHHHHHHHHHhCCCCCeEEEeCCcHHHHHHHhccCCCCceEEecCcccccccH-HHHHHHHHhc------------C
Confidence 57889999999888774 2222222211 1 1 112222 256778888 9999999998 4
Q ss_pred CceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-cccccc-c---cc------ccCCcchhhccccCCccEEE
Q 018048 224 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMS-H---LR------ATSDPQIYKKGPAFGMPGFH 292 (361)
Q Consensus 224 ~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~-~---~~------q~~~~d~~~~A~a~Gi~~~~ 292 (361)
+++|||++|||+|+|+ .++|+||+++++|+++||.||+ |++... . .. ....+||.++|++||+++++
T Consensus 433 ~~~vv~i~GDGsf~~~--~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~ 510 (556)
T 3hww_A 433 GKPTLAIVGDLSALYD--LNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHR 510 (556)
T ss_dssp CCCEEEEEEHHHHHHT--GGGHHHHTTCSSCEEEEEEESCC-----------------CCCCCCCCSHHHHHHTTCEEEC
T ss_pred CCcEEEEEccHHhhhc--chhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhHHHhccCCCCCCHHHHHHHcCCcEEe
Confidence 7889999999999998 8999999999999999999998 443211 0 01 12468999999999999999
Q ss_pred EeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 018048 293 VDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 327 (361)
Q Consensus 293 Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R 327 (361)
|++.+ +++++++++++.+||+||||.|++
T Consensus 511 v~~~~------~l~~al~~a~~~~gp~liev~~~~ 539 (556)
T 3hww_A 511 PQNWQ------ELETAFADAWRTPTTTVIEMVVND 539 (556)
T ss_dssp CSSHH------HHHHHHHHHTTSSSEEEEEEECCS
T ss_pred cCCHH------HHHHHHHHHHhCCCCEEEEEECCc
Confidence 98664 456778888888999999999865
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.74 E-value=2.1e-19 Score=187.47 Aligned_cols=152 Identities=15% Similarity=0.016 Sum_probs=114.7
Q ss_pred CCCHHHHHHHHhcCcCC--CcccCCCccccc-----cc---cccc--cCCccccccccHHHHHHHHHHHHHHhhhhhcCC
Q 018048 156 GVPARAVMSELFGKATG--CCRGQGGSMHMF-----SK---EHNL--LGGFAFIGEGIPVATGAAFTSKYRREVLKEADC 223 (361)
Q Consensus 156 g~~~~~~~~el~~~~~g--~~~gd~G~~h~~-----~~---~~~~--~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~ 223 (361)
.+++..++.+|....++ ++..+.|....+ .. +.++ ..+.+.||+++|+|+|+++| +
T Consensus 404 ~~~~~~~~~~L~~~lp~d~iv~~d~g~~~~~~~~~~~~~~~~~~~~~~~G~~~ig~~l~~AiGaala------------~ 471 (604)
T 2x7j_A 404 VSFEGNLYRILQHLVPENSSLFVGNSMPIRDVDTFFEKQDRPFRIYSNRGANGIDGVVSSAMGVCEG------------T 471 (604)
T ss_dssp TTSHHHHHHHHHHHSCTTCEEEECTTHHHHHHHHHCCCBSCCCEEECCTTTCCSSSHHHHHHHHHHH------------H
T ss_pred CCCHHHHHHHHHHhCCCCCEEEEECCHHHHHHHHhcccCCCCceEEeCCCcCCcCcHHHHHHHHHhc------------C
Confidence 46788888888877763 344556654332 11 3333 34578999999999999999 3
Q ss_pred CceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-ccccc-ccccc-----------cCCcchhhccccCCccE
Q 018048 224 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGM-SHLRA-----------TSDPQIYKKGPAFGMPG 290 (361)
Q Consensus 224 ~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~-~~~~q-----------~~~~d~~~~A~a~Gi~~ 290 (361)
+++|||++|||+|+|+ +++|+||+++++|+++||.||+ |++.. ....| ...+||.++|++||+++
T Consensus 472 ~~~vv~i~GDGsf~~~--~~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~ 549 (604)
T 2x7j_A 472 KAPVTLVIGDLSFYHD--LNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHFEDLFGTPTGLDFKHAAALYGGTY 549 (604)
T ss_dssp TSCEEEEEEHHHHHHT--GGGGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHHHHHTTCCCCCCTHHHHHHTTCEE
T ss_pred CCcEEEEEccHHHHhH--HHHHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchhhHhhccCCCCCCHHHHHHHcCCeE
Confidence 6789999999999998 7899999999999988888775 66521 11111 13579999999999999
Q ss_pred EEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 018048 291 FHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 327 (361)
Q Consensus 291 ~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R 327 (361)
++|++.+ + ++++++++++.++|+||||.|+|
T Consensus 550 ~~v~~~~--e----l~~al~~a~~~~gp~liev~~~~ 580 (604)
T 2x7j_A 550 SCPASWD--E----FKTAYAPQADKPGLHLIEIKTDR 580 (604)
T ss_dssp ECCSSHH--H----HHHHCCCCCSSCCEEEEEEECCH
T ss_pred EecCCHH--H----HHHHHHHHHhCCCCEEEEEECCc
Confidence 9998643 4 56667666777899999999875
No 44
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.71 E-value=2e-18 Score=179.21 Aligned_cols=112 Identities=21% Similarity=0.204 Sum_probs=83.7
Q ss_pred ccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCC-ccccccc-ccc
Q 018048 196 FIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSH-LRA 273 (361)
Q Consensus 196 ~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~-y~is~~~-~~q 273 (361)
.+|+++|+|+|+++ ++++|||++|||+|+|+ .+||+||+++++|+++||.||+ |++.... +.|
T Consensus 437 G~~g~l~~AiGaa~-------------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~ 501 (578)
T 3lq1_A 437 GIDGVVSSALGASV-------------VFQPMFLLIGDLSFYHD--MNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQAN 501 (578)
T ss_dssp CSSSHHHHHHHHTT-------------TSSSEEEEEEHHHHHHT--GGGGHHHHHTTCCEEEEEECCC------------
T ss_pred ccccHHHHHHHHhc-------------CCCCEEEEEchHHHHhh--HHHHHhhccCCCCeEEEEEECCcCcccccccccc
Confidence 34447999999963 47899999999999998 8999999999999999999997 5442110 111
Q ss_pred -----------cCCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecC
Q 018048 274 -----------TSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRF 328 (361)
Q Consensus 274 -----------~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~ 328 (361)
...+||.++|++||+++++|++.+ ++++|++++++.+||+||||.|++.
T Consensus 502 ~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~~------el~~al~~a~~~~gp~liev~~~~~ 561 (578)
T 3lq1_A 502 EPKYFESLFGTSTELDFRFAAAFYDADYHEAKSVD------ELEEAIDKASYHKGLDIIEVKTNRH 561 (578)
T ss_dssp -------------CCCTHHHHHHTTCEEEECCSHH------HHHHHHHHHTTSSSEEEEEEC----
T ss_pred ccchhhhhccCCCCCCHHHHHHHcCCceEecCCHH------HHHHHHHHHHhCCCCEEEEEECCcc
Confidence 134799999999999999998554 4566777778889999999999774
No 45
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.44 E-value=1e-13 Score=154.58 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=77.3
Q ss_pred CCceEEEEECCC-cccCcchHHHHHHhhhCCCCeEEEEEcCCccccccccccc------------------CCcchhhcc
Q 018048 223 CDHVTLAFFGDG-TCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT------------------SDPQIYKKG 283 (361)
Q Consensus 223 ~~~~Vv~~~GDG-s~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~------------------~~~d~~~~A 283 (361)
+++.||++.||| +|+|| .++|.||+++++||++||.||+ .+++....+. ..+|+.++|
T Consensus 952 ~~~~Vv~i~GDG~~~~mg--~~eL~ta~~~~~~v~iiVlnN~-~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA 1028 (1231)
T 2c42_A 952 TKKSVWIFGGDGWAYDIG--YGGLDHVLASGEDVNVFVMDTE-VYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMV 1028 (1231)
T ss_dssp SCCEEEEEEEHHHHHTTT--HHHHHHHHHTTCSCEEEEEECS-SBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHH
T ss_pred cCCcEEEEeCcHHHHHcc--hHHHHHHHHhCCCeEEEEEECH-HHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHH
Confidence 358999999999 89999 9999999999999999999998 4444331110 136999999
Q ss_pred ccCCccEEEEe-C-CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecC
Q 018048 284 PAFGMPGFHVD-G-MDVLKVREVAKEAIERARRGEGPTLVECETYRF 328 (361)
Q Consensus 284 ~a~Gi~~~~Vd-g-~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~ 328 (361)
++||++++++. - .++.++.. +++++++.+||+|||+.+.-.
T Consensus 1029 ~a~G~~~va~~~v~~~~~~l~~----al~eAl~~~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1029 MTYGYVYVATVSMGYSKQQFLK----VLKEAESFPGPSLVIAYATCI 1071 (1231)
T ss_dssp HTTSSSEEEEECTTTCHHHHHH----HHHHHHHSSSCEEEEEECCCG
T ss_pred HHCCCCEEEEEeccCCHHHHHH----HHHHHHhcCCCEEEEEeecCc
Confidence 99999999654 3 37666654 555555679999999998654
No 46
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.29 E-value=3.7e-12 Score=136.20 Aligned_cols=130 Identities=17% Similarity=0.181 Sum_probs=109.6
Q ss_pred cccCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcc---hHHHHHHhhhCCCC-eEEEEEcCCc
Q 018048 189 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMAALWKLP-IVFVVENNLW 264 (361)
Q Consensus 189 ~~~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~---~~eeL~tA~~~~LP-vi~VV~NN~y 264 (361)
++....|+||++++.|+|+|+. +++..|+|++|||..++|. .|+...++..+++. ++.|+.+|+|
T Consensus 169 Gve~~tG~LGqGls~AvG~A~~-----------~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~D~N~~ 237 (845)
T 3ahc_A 169 GSIHEGGELGYALSHAYGAVMN-----------NPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPILHLNGY 237 (845)
T ss_dssp TCSCCCSSTTCHHHHHHHHHTT-----------CTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEEEECSB
T ss_pred CeecCCCCccchHhHHhhhhhc-----------CCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEEECCCC
Confidence 4456679999999999999976 6889999999999999998 78888888888998 8888899999
Q ss_pred ccccccccc-cCCcchhhccccCCccEE-EEeC-C--CHHHHHHHHHHHHHH-----------HHc--CCCC--EEEEEE
Q 018048 265 AIGMSHLRA-TSDPQIYKKGPAFGMPGF-HVDG-M--DVLKVREVAKEAIER-----------ARR--GEGP--TLVECE 324 (361)
Q Consensus 265 ~is~~~~~q-~~~~d~~~~A~a~Gi~~~-~Vdg-~--D~~~v~~al~~Al~~-----------ar~--~~gP--~lIev~ 324 (361)
.|..++... ....++.++.++||+..+ .||| + |+.++.+++.+|++. +++ .++| .+|.++
T Consensus 238 ~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~Ii~r 317 (845)
T 3ahc_A 238 KIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPMLIFR 317 (845)
T ss_dssp SSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEEEEE
T ss_pred cCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEEEEE
Confidence 987766432 245689999999999999 9999 8 999999887766643 343 3689 999999
Q ss_pred EecCC
Q 018048 325 TYRFR 329 (361)
Q Consensus 325 t~R~~ 329 (361)
|.+..
T Consensus 318 T~kG~ 322 (845)
T 3ahc_A 318 TPKGW 322 (845)
T ss_dssp CCTTT
T ss_pred CcccC
Confidence 99988
No 47
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=94.51 E-value=0.26 Score=50.61 Aligned_cols=107 Identities=19% Similarity=0.128 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-ccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~~~q~~~~d~~ 280 (361)
-+|.|.+.+. +.-.++++..|=|..+. ...+..|...++|+|+|.-+-.... +.....| ..|..
T Consensus 57 ~~A~GyAr~t----------g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q--~~d~~ 121 (589)
T 2pgn_A 57 WMVNGYNYVK----------DRSAAVGAWHCVGNLLL---HAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQ--QVPWQ 121 (589)
T ss_dssp HHHHHHHHHH----------TSCCEEEEEEGGGGGGC---HHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSS--CCCGG
T ss_pred HHHHHHHHHH----------CCCEEEEEecCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCCCCccc--ccChh
Confidence 3566766652 33457788888888884 5689999999999999988765221 1110122 23444
Q ss_pred hccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEe
Q 018048 281 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETY 326 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~-gP~lIev~t~ 326 (361)
. .+.+--...++. ++.++...+.+|+..+..++ ||+.|++-.+
T Consensus 122 ~-~~~~tk~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 165 (589)
T 2pgn_A 122 S-FTPIARSTQRVE--RLDKVGEAIHEAFRVAEGHPAGPAYVDIPFD 165 (589)
T ss_dssp G-GTTTSSEEEECC--SGGGHHHHHHHHHHHHTSSSCCEEEEEEETH
T ss_pred h-ccccEEEEeecC--CHHHHHHHHHHHHHHHhcCCCccEEEEeCHh
Confidence 5 555555555664 45578889999999998876 9999988654
No 48
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.36 E-value=0.12 Score=52.59 Aligned_cols=108 Identities=13% Similarity=-0.051 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 281 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~ 281 (361)
-+|.|.+.+. +.-.++++..|=|..+. ...+..|...++|+|+|.-+-.... .........|...
T Consensus 55 ~~A~GyAr~t----------g~~~v~~~TsGpG~~N~---~~gi~~A~~~~vPvl~itg~~~~~~--~~~~~~Q~~d~~~ 119 (549)
T 3eya_A 55 FAAGAEAQLS----------GELAVCAGSCGPGNLHL---INGLFDCHRNHVPVLAIAAHIPSSE--IGSGYFQETHPQE 119 (549)
T ss_dssp HHHHHHHHHH----------SSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEESCGGG--TTSCCTTCCCHHH
T ss_pred HHHHHHHHHh----------CCCEEEEeCCCCcHhhh---HHHHHHHHhhCCCEEEEeCCCchhh--cCCCCCCccCHHH
Confidence 3466666652 22344555557776663 5689999999999999987654111 1111112346677
Q ss_pred ccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 018048 282 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 326 (361)
Q Consensus 282 ~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~ 326 (361)
+.+.+--....+. ++.++.+.+.+|+..+....||+.|++-.+
T Consensus 120 ~~~~~tk~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d 162 (549)
T 3eya_A 120 LFRECSHYCELVS--SPEQIPQVLAIAMRKAVLNRGVSVVVLPGD 162 (549)
T ss_dssp HTSTTCSEEEECC--SGGGHHHHHHHHHHHHHHTTSEEEEEEEHH
T ss_pred HHhhhhheEEEeC--CHHHHHHHHHHHHHHHhhCCCCEEEEeChh
Confidence 7776666666665 445888899999999988889999998653
No 49
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.31 E-value=0.13 Score=52.50 Aligned_cols=108 Identities=18% Similarity=0.119 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCC-cchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSD-PQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~-~d~~ 280 (361)
-+|.|.+.+. +.-.++++..|=|..+. ...+..|...++|+|+|+-+-....- ....... .|..
T Consensus 55 ~~A~Gyar~t----------g~p~v~~~TsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~--~~~~~Q~~~d~~ 119 (563)
T 2uz1_A 55 HAAEGYARAG----------AKLGVALVTAGGGFTNA---VTPIANAWLDRTPVLFLTGSGALRDD--ETNTLQAGIDQV 119 (563)
T ss_dssp HHHHHHHHHH----------TSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGT--TSCCTTCCCCHH
T ss_pred HHHHHHHHHh----------CCCEEEEEccCccHHHH---HHHHHHHHhcCCCEEEEeCCCCcccC--CchhhhhhccHH
Confidence 4566776662 22234444445566663 56788899999999999887652211 1111123 4667
Q ss_pred hccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEe
Q 018048 281 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETY 326 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~-gP~lIev~t~ 326 (361)
.+.+.+--...++. ++.++...+.+|+..++.++ ||+.|++-.+
T Consensus 120 ~~~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 120 AMAAPITKWAHRVM--ATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp HHHGGGCSEEEECC--CGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred HHhhhhhceEEEcC--CHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 77777766666775 45588889999999998876 9999998765
No 50
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=94.26 E-value=0.14 Score=52.86 Aligned_cols=106 Identities=16% Similarity=0.066 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcc-cccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~-is~~~~~q~~~~d~~ 280 (361)
-+|.|.+.+. +.-.++++..|=|+.+. ...+..|...++|+|+|+-+-... ++. ......|..
T Consensus 64 ~aA~GyAr~t----------g~~gv~~~TsGpG~~N~---~~gia~A~~~~vPvl~itG~~~~~~~~~---~~~Q~~d~~ 127 (603)
T 4feg_A 64 MAAAADAKLT----------GKIGVCFGSAGPGGTHL---MNGLYDAREDHVPVLALIGQFGTTGMNM---DTFQEMNEN 127 (603)
T ss_dssp HHHHHHHHHH----------SSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTTTTS---CCTTCCCCG
T ss_pred HHHHHHHHHh----------CCceEEEecCCchHHHH---HHHHHHHHHcCCCEEEEecCCcccccCC---CccccccHH
Confidence 3466666652 22334555557777763 567999999999999998654311 111 111224566
Q ss_pred hccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEE
Q 018048 281 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECET 325 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t 325 (361)
.+.+.+--...+|...+ ++.+.+.+|+..|....||+.|++-.
T Consensus 128 ~~~~~~tk~~~~v~~~~--~~~~~i~~A~~~A~~~~GPV~l~iP~ 170 (603)
T 4feg_A 128 PIYADVADYNVTAVNAA--TLPHVIDEAIRRAYAHQGVAVVQIPV 170 (603)
T ss_dssp GGGTTTCSEEEECCCST--THHHHHHHHHHHHHHHTSEEEEEEET
T ss_pred HHhhhhceEEEEcCCHH--HHHHHHHHHHHHHhcCCCCEEEEeCh
Confidence 66666666666776544 77778899998888888999999864
No 51
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=94.13 E-value=0.12 Score=53.04 Aligned_cols=108 Identities=24% Similarity=0.217 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 281 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~ 281 (361)
-+|.|.+.+. +.-.++++..|=|+.+. ...+..|...++|+|+|+-+-....- ........|...
T Consensus 64 ~~A~Gyar~t----------g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~--g~~~~Q~~d~~~ 128 (590)
T 1ybh_A 64 FAAEGYARSS----------GKPGICIATSGPGATNL---VSGLADALLDSVPLVAITGQVPRRMI--GTDAFQETPIVE 128 (590)
T ss_dssp HHHHHHHHHH----------SSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGT--TTTCTTCCCHHH
T ss_pred HHHHHHHHHH----------CCCEEEEeccCchHHHH---HHHHHHHHhhCCCEEEEeCcCCcccc--CCCcccccCHHH
Confidence 4567777662 23344555556665553 66899999999999999886642211 111122346667
Q ss_pred ccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEe
Q 018048 282 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETY 326 (361)
Q Consensus 282 ~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~-gP~lIev~t~ 326 (361)
+.+.+--...+|. ++.++...+++|+..++.++ ||+.|++-.+
T Consensus 129 ~~~~~~k~~~~v~--~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~d 172 (590)
T 1ybh_A 129 VTRSITKHNYLVM--DVEDIPRIIEEAFFLATSGRPGPVLVDVPKD 172 (590)
T ss_dssp HHGGGSSEEEECC--CGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHhCeEEecC--CHHHHHHHHHHHHHHHhhCCCceEEEEeCcc
Confidence 7777666666665 45588889999999998764 8999998664
No 52
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=93.98 E-value=0.13 Score=52.63 Aligned_cols=108 Identities=17% Similarity=0.059 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 281 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~ 281 (361)
-+|.|.+.+. +.-.++++..|=|..+. ...+..|...++|+|+|+-+-....- ........|...
T Consensus 62 ~~A~Gyar~t----------g~p~v~~~TsGpG~~N~---~~~l~~A~~~~vPll~itg~~~~~~~--~~~~~Q~~d~~~ 126 (566)
T 1ozh_A 62 FMAAAVGRIT----------GKAGVALVTSGPGCSNL---ITGMATANSEGDPVVALGGAVKRADK--AKQVHQSMDTVA 126 (566)
T ss_dssp HHHHHHHHHH----------SSCEEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTTC--------CCCHHH
T ss_pred HHHHHHHHHH----------CCCEEEEEccChHHHHH---HHHHHHHHhcCCCEEEEeCCCccccC--CCCcccccCHHH
Confidence 4566766652 22234444446666663 66788999999999999887652211 111112346677
Q ss_pred ccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEe
Q 018048 282 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETY 326 (361)
Q Consensus 282 ~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~-gP~lIev~t~ 326 (361)
+.+.+--...+|. ++.++...+++|+..+..++ ||+.|++-.+
T Consensus 127 ~~~~~tk~~~~v~--~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 127 MFSPVTKYAIEVT--APDALAEVVSNAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp HHGGGCSEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHhheEEEcC--CHHHHHHHHHHHHHHHhcCCCCeEEEEeChh
Confidence 7777766667775 45578888999999998874 9999998765
No 53
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=93.85 E-value=0.24 Score=50.59 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-cccc-ccc----cC
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSH-LRA----TS 275 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~-~~q----~~ 275 (361)
-+|.|.+.+. + -.++++..|=|..+. ...+..|...++|+|+|+-+-.... +... ..+ ..
T Consensus 55 ~~A~Gyar~t----------g-~~v~~~TsGpG~~N~---~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~ 120 (566)
T 2vbi_A 55 FSAEGYARSN----------G-AAAAVVTFSVGAISA---MNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTD 120 (566)
T ss_dssp HHHHHHHHHH----------S-CEEEEECTTTTHHHH---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSC
T ss_pred HHHHHHHhhc----------C-CeEEEEeCCCCHHHH---HHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcc
Confidence 4567777662 3 334444457777662 5578889999999999998765221 1100 001 01
Q ss_pred CcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 018048 276 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 327 (361)
Q Consensus 276 ~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R 327 (361)
..|...+.+.+--....+...+ ++...+++|+..+..++||+.|++-.+-
T Consensus 121 ~~d~~~~~~~~tk~~~~v~~~~--~~~~~l~~A~~~a~~~~GPV~l~iP~d~ 170 (566)
T 2vbi_A 121 YSYQLEMARQVTCAAESITDAH--SAPAKIDHVIRTALRERKPAYLDIACNI 170 (566)
T ss_dssp CTHHHHHHHTTCSEEEEECSSS--SHHHHHHHHHHHHHHHTCCEEEEEETTT
T ss_pred hHHHHHHHhhhEeEEEEeCCHH--HHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence 1356777777777777886554 6777889999998888899999997653
No 54
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=93.76 E-value=0.14 Score=52.49 Aligned_cols=109 Identities=11% Similarity=0.052 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccc-cccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHL-RATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~-~q~~~~d~~ 280 (361)
-+|.|.+.+. +.-.++++..|=|..+. .-.+..|...++|+|+|.-+-....- .. ......|..
T Consensus 62 ~~A~Gyar~t----------g~p~v~~~TsGpG~~N~---~~~v~~A~~~~~Pll~itg~~~~~~~--~~~~~~Q~~d~~ 126 (573)
T 2iht_A 62 VAADVLARIT----------GRPQACWATLGPGMTNL---STGIATSVLDRSPVIALAAQSESHDI--FPNDTHQCLDSV 126 (573)
T ss_dssp HHHHHHHHHH----------CSCEEEEECTTHHHHHH---HHHHHHHHHHTCCEEEEEEESCGGGC--CTTTSTTCCCHH
T ss_pred HHHHHHHHHH----------CCCEEEEEccCchHHHH---HHHHHHHHhhCCCEEEEcccCccccc--CCcCccccCCHH
Confidence 3466666652 22234444456565552 56788999999999999887652221 11 112234667
Q ss_pred hccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEec
Q 018048 281 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETYR 327 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~-gP~lIev~t~R 327 (361)
.+.+.+--...++. ++.++...+++|++.++.++ ||+.|++-.+-
T Consensus 127 ~~~~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~dv 172 (573)
T 2iht_A 127 AIVAPMSKYAVELQ--RPHEITDLVDSAVNAAMTEPVGPSFISLPVDL 172 (573)
T ss_dssp HHHGGGSSEEEECC--SGGGHHHHHHHHHHHHTBSSCCCEEEEEEHHH
T ss_pred HHHHhHhhEEEEcC--CHHHHHHHHHHHHHHHhcCCCceEEEEecchH
Confidence 77777666666765 45578889999999998876 99999997653
No 55
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=93.69 E-value=0.18 Score=52.92 Aligned_cols=107 Identities=22% Similarity=0.157 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 281 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~ 281 (361)
-+|.|.+.+. +.-.+++|..|=|+.+. .-.+..|...++|+|+|+-+-.... .........|...
T Consensus 134 ~aAdGyAr~t----------Gkpgvv~~TsGpG~~N~---~~gia~A~~d~vPllvItG~~~~~~--~g~~a~Q~~Dq~~ 198 (677)
T 1t9b_A 134 HMAEGYARAS----------GKPGVVLVTSGPGATNV---VTPMADAFADGIPMVVFTGQVPTSA--IGTDAFQEADVVG 198 (677)
T ss_dssp HHHHHHHHHH----------SSCEEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTT--TTSCCTTCCCHHH
T ss_pred HHHHHHHHHH----------CCCEEEEECCChHHHHH---HHHHHHHHHcCCCEEEEeCCCChhh--cCCCCccccCHHH
Confidence 4567777662 23345555566666663 6678999999999999987654211 1111112345666
Q ss_pred ccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcC-CCCEEEEEEE
Q 018048 282 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRG-EGPTLVECET 325 (361)
Q Consensus 282 ~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~-~gP~lIev~t 325 (361)
+.+.+--..+.|. ++.++...+++|++.++.+ .||+.|++-.
T Consensus 199 i~~~~tk~~~~v~--~~~~i~~~i~~A~~~A~~grpGPV~l~lP~ 241 (677)
T 1t9b_A 199 ISRSCTKWNVMVK--SVEELPLRINEAFEIATSGRPGPVLVDLPK 241 (677)
T ss_dssp HTGGGSSEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred HhhhheeEEEEcC--CHHHHHHHHHHHHHHHhhCCCceEEEEcCH
Confidence 6666655566665 5568888999999999886 5999999973
No 56
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=93.54 E-value=0.29 Score=49.99 Aligned_cols=110 Identities=14% Similarity=0.102 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-ccccc-cc----cC
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSHL-RA----TS 275 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~~-~q----~~ 275 (361)
-+|.|.+.+. + -.++++..|=|+.+. ...+..|...++|+|+|+-+-.... +.... .+ ..
T Consensus 55 ~~A~Gyar~t----------g-~~v~~~TsGpG~~N~---~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~ 120 (568)
T 2wvg_A 55 FSAEGYARAK----------G-AAAAVVTYSVGALSA---FDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTD 120 (568)
T ss_dssp HHHHHHHHHH----------S-CEEEEECTTTTHHHH---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSC
T ss_pred HHHHHHHHhh----------C-CeEEEEeCCCCHHHH---HHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccc
Confidence 4567777662 3 345555567776662 5678889999999999998765221 11000 01 01
Q ss_pred CcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEec
Q 018048 276 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 327 (361)
Q Consensus 276 ~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R 327 (361)
..|...+.+.+--....|.. +.++...+++|+..+..+.||+.|++-.+-
T Consensus 121 ~~d~~~~~~~~tk~~~~v~~--~~~~~~~l~~A~~~A~~~~GPV~l~iP~dv 170 (568)
T 2wvg_A 121 YHYQLEMAKNITAAAEAIYT--PEEAPAKIDHVIKTALREKKPVYLEIACNI 170 (568)
T ss_dssp CCHHHHHHTTSCSCEEEECS--GGGHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred hHHHHHHHHhhEeEEEEeCC--HHHHHHHHHHHHHHHHhCCCCEEEEechhH
Confidence 13567777777777778864 447778889999999888899999997654
No 57
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=93.49 E-value=0.21 Score=51.04 Aligned_cols=110 Identities=16% Similarity=0.074 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcc-ccccc--ccccCCcc
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSH--LRATSDPQ 278 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~-is~~~--~~q~~~~d 278 (361)
-+|.|.+.+. +.-.++++..|=|..+. .-.+..|...++|+|+|+-+-... ++... ..+....|
T Consensus 73 ~~A~GyAr~t----------gkp~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d 139 (565)
T 2nxw_A 73 FAADAAARYS----------STLGVAAVTYGAGAFNM---VNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLD 139 (565)
T ss_dssp HHHHHHHHHH----------TSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------C
T ss_pred HHHHHHHHHh----------CCCeEEEECCCCCHHHH---HHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchh
Confidence 3466666652 22234444446666653 668889999999999998875321 11100 01111233
Q ss_pred -hhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 018048 279 -IYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 326 (361)
Q Consensus 279 -~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~ 326 (361)
...+.+.+--...++...+ ++...+++|+..+....||+.|++-.+
T Consensus 140 ~q~~~~~~~~k~~~~v~~~~--~~~~~i~~A~~~A~~~~GPV~l~iP~D 186 (565)
T 2nxw_A 140 TQFQVFKEITVAQARLDDPA--KAPAEIARVLGAARAQSRPVYLEIPRN 186 (565)
T ss_dssp HHHHHHTTSCSCEEECCCTT--THHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred hHHHHHHhhheEEEEeCCHH--HHHHHHHHHHHHHHhCCCCEEEECChh
Confidence 5566667766667776443 677788889888887789999999854
No 58
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=93.31 E-value=0.27 Score=50.65 Aligned_cols=110 Identities=15% Similarity=0.076 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 281 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~ 281 (361)
=+|.|.+.+. +.-.++++..|=|+.+. .-.+..|...++|+|+|.-+-....- ........|...
T Consensus 83 ~aA~GyAr~t----------gkpgv~~~TsGpG~~N~---~~gia~A~~~~vPlv~ItG~~~~~~~--g~~~~Q~~d~~~ 147 (604)
T 2x7j_A 83 FFALGLAKAK----------QRPVLLICTSGTAAANF---YPAVVEAHYSRVPIIVLTADRPHELR--EVGAPQAINQHF 147 (604)
T ss_dssp HHHHHHHHHH----------TSCEEEEECSSHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGS--SSCCTTCCCCTT
T ss_pred HHHHHHHHhh----------CCCEEEEECChhHHHHH---HHHHHHHhhcCCCEEEEeCCCCHHHh--CCCCCCcCcHHH
Confidence 3466766662 22344555556666663 66799999999999999877642211 111112345666
Q ss_pred ccccCCccEEEEeCCCH-----HHHHHHHHHHHHHHHc-CCCCEEEEEEEe
Q 018048 282 KGPAFGMPGFHVDGMDV-----LKVREVAKEAIERARR-GEGPTLVECETY 326 (361)
Q Consensus 282 ~A~a~Gi~~~~Vdg~D~-----~~v~~al~~Al~~ar~-~~gP~lIev~t~ 326 (361)
+.+.+--....|...+- ..+...+++|+..+.. ..||+.|++-.+
T Consensus 148 ~~~~~tk~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 148 LFGNFVKFFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp TTGGGSSCEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred HhhhheeeeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 66666666777765441 0167788999998887 459999999865
No 59
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=92.57 E-value=0.3 Score=49.29 Aligned_cols=109 Identities=17% Similarity=0.118 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-ccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~~~q~~~~d~~ 280 (361)
-+|.|.+.+. +.-.++++..|=|..+. ...+..|...++|+|+|.-+-.... +. ...|. ..|..
T Consensus 52 ~~A~Gyar~t----------g~~~v~~~tsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~-~~~q~-~~d~~ 116 (528)
T 1q6z_A 52 GIADGYAQAS----------RKPAFINLHSAAGTGNA---MGALSNAWNSHSPLIVTAGQQTRAMIGV-EALLT-NVDAA 116 (528)
T ss_dssp HHHHHHHHHH----------TSCEEEEEEHHHHHHHT---HHHHHHHHHTTCCEEEEEEECCHHHHTT-TCTTC-CTTGG
T ss_pred HHHHHHHHHh----------CCCEEEEEcCChHHHHH---HHHHHHHhhcCCCEEEEeCCCcccccCC-Ccccc-cccHH
Confidence 4566777662 23344555567777763 5678889999999999987654211 11 11121 13666
Q ss_pred hccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEec
Q 018048 281 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETYR 327 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~-gP~lIev~t~R 327 (361)
.+.+.+--...++. ++.++...+.+|+..++.++ ||+.|++-.+-
T Consensus 117 ~~~~~~~k~~~~v~--~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d~ 162 (528)
T 1q6z_A 117 NLPRPLVKWSYEPA--SAAEVPHAMSRAIHMASMAPQGPVYLSVPYDD 162 (528)
T ss_dssp GSSTTSCSCEECCS--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEGGG
T ss_pred HHHHHhhHhhhcCC--CHHHHHHHHHHHHHHHhcCCCCcEEEEechhh
Confidence 66666655555554 44577788999999998765 79999997754
No 60
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=92.34 E-value=0.46 Score=48.64 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhhc
Q 018048 203 VATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKK 282 (361)
Q Consensus 203 ~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~ 282 (361)
+|.|.|.+. +.-.++++..|=|+.+. .-.+..|...++|+|+|.-+-.... .........|...+
T Consensus 64 aAdGyAr~t----------G~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~p~~~--~g~~~~Qe~d~~~~ 128 (578)
T 3lq1_A 64 FALGLAKAS----------KRPVVLLCTSGTAAANY---FPAVAEANLSQIPLIVLTADRPHEL--RNVGAPQAMDQLHL 128 (578)
T ss_dssp HHHHHHHHH----------CCCEEEEECSSHHHHTT---HHHHHHHHHTTCCEEEEEEECCGGG--TTSSCTTCCCCTTT
T ss_pred HHHHHHHhh----------CCCEEEEECCchhhhhh---hHHHHHHHhcCCCeEEEeCCCCHHh--hcCCCCCCcCHhhH
Confidence 466777662 33345555567777763 5679999999999999987543211 01111122355666
Q ss_pred cccCCccEEEEeCCC-HHH----HHHHHHHHHHHHHcC-CCCEEEEEEE
Q 018048 283 GPAFGMPGFHVDGMD-VLK----VREVAKEAIERARRG-EGPTLVECET 325 (361)
Q Consensus 283 A~a~Gi~~~~Vdg~D-~~~----v~~al~~Al~~ar~~-~gP~lIev~t 325 (361)
.+.+--....|...+ +.+ +...+++|+..|..+ .||+.|++-.
T Consensus 129 ~~~~tk~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 129 YGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp TGGGSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred HhhheeeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 666655566665443 222 334678888888876 5999999975
No 61
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=92.31 E-value=0.15 Score=50.12 Aligned_cols=107 Identities=18% Similarity=0.185 Sum_probs=61.3
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccccc--ccccccCCc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDP 277 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~--~~~~q~~~~ 277 (361)
.+.+|+|++++ ..+.++...|.|-..+ .+.|..++..++|+++++.+-. +.+. +...+...
T Consensus 76 a~~~a~Gaa~a------------G~r~~~~ts~~G~~~~---~d~l~~aa~~~~P~Vi~~~~~~-~~~~g~~~~~~~sd- 138 (395)
T 1yd7_A 76 SIAAAIGASWA------------GAKAMTATSGPGFSLM---QENIGYAVMTETPVVIVDVQRS-GPSTGQPTLPAQGD- 138 (395)
T ss_dssp HHHHHHHHHHT------------TCCEEEEEETTHHHHH---TTTCC----CCCCEEEEEEC------------------
T ss_pred HHHHHHHHHHh------------CCcEEEEeCchHHHHH---HHHHHHHHhcCCCEEEEEeeCC-CCCCCCCcccchhH-
Confidence 45678888887 4567778888887663 3456667788999888888765 2221 11111111
Q ss_pred chhhc-cc--cCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEE
Q 018048 278 QIYKK-GP--AFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECET 325 (361)
Q Consensus 278 d~~~~-A~--a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t 325 (361)
.+..+ +. .+|++.+.. .++.+.+..+..|++.+++.+.|+++....
T Consensus 139 ~~~~~~~~~g~~g~~vl~p--~~~qea~~l~~~A~~lA~~~~~PVi~~~~~ 187 (395)
T 1yd7_A 139 IMQAIWGTHGDHSLIVLSP--STVQEAFDFTIRAFNLSEKYRTPVILLTDA 187 (395)
T ss_dssp ----------CCCCEEECC--CSHHHHHHHHHHHHHHHHHHTSEEEEEECH
T ss_pred HHHHHhccCCCcceEEEeC--CCHHHHHHHHHHHHHHHHHHCCCEEEEcch
Confidence 11112 11 235555544 567789888999999888888999987754
No 62
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=92.12 E-value=0.31 Score=50.09 Aligned_cols=93 Identities=15% Similarity=0.012 Sum_probs=61.6
Q ss_pred eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCCHHHHHHHH
Q 018048 226 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVA 305 (361)
Q Consensus 226 ~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al 305 (361)
++++..|=|..+. .-.+..|...++|+|+|+-+-..........| ..|...+.+.+--..+.+. ++.++...+
T Consensus 71 v~~~tsGpG~~N~---~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q--~~d~~~~~~~~tk~~~~v~--~~~~~~~~i 143 (590)
T 1v5e_A 71 VTVGSGGPGASHL---INGLYDAAMDNIPVVAILGSRPQRELNMDAFQ--ELNQNPMYDHIAVYNRRVA--YAEQLPKLV 143 (590)
T ss_dssp EEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTTTCTT--CCCCHHHHHTTCSEEEECC--SGGGHHHHH
T ss_pred EEEeCcChHHHHH---HHHHHHHHhcCCCEEEEcCCCCcccCCCCccc--ccCHHHHHHhhccEEEEeC--CHHHHHHHH
Confidence 4444446555552 66788899999999999887652211111122 2455666666655556664 555888899
Q ss_pred HHHHHHHHcCC-CCEEEEEEEe
Q 018048 306 KEAIERARRGE-GPTLVECETY 326 (361)
Q Consensus 306 ~~Al~~ar~~~-gP~lIev~t~ 326 (361)
++|++.+..++ ||+.| +-.+
T Consensus 144 ~~A~~~A~~~~~GPV~l-iP~d 164 (590)
T 1v5e_A 144 DEAARMAIAKRGVAVLE-VPGD 164 (590)
T ss_dssp HHHHHHHHHTTSEEEEE-EETT
T ss_pred HHHHHHHhcCCCceEEE-Eccc
Confidence 99999998877 99999 6543
No 63
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=91.99 E-value=0.22 Score=50.70 Aligned_cols=109 Identities=15% Similarity=0.217 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-ccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~~~q~~~~d~~ 280 (361)
-+|.|.+.+. +.-.++++..|=|..+. ...+..|...++|+|+|.-+-.... +. ........|..
T Consensus 59 ~~A~Gyar~t----------g~pgv~~~TsGpG~~N~---~~gi~~A~~~~vPll~itg~~~~~~~~~-~~~~~Q~~dq~ 124 (564)
T 2q28_A 59 YAAAASGFLT----------QKPGICLTVSAPGFLNG---LTALANATVNGFPMIMISGSSDRAIVDL-QQGDYEELDQM 124 (564)
T ss_dssp HHHHHHHHHH----------SSCEEEEECSHHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHT-TSCCTTCCCHH
T ss_pred HHHHHHHHHh----------CCCEEEEEccCchHHHH---HHHHHHHHhcCCCEEEEeCCCCccccCC-CCCccccccHH
Confidence 3466766652 22234455556665552 5678889999999999988765221 10 01111224566
Q ss_pred hccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcC-CCCEEEEEEEe
Q 018048 281 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRG-EGPTLVECETY 326 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~-~gP~lIev~t~ 326 (361)
.+.+.+--...+|. ++.++...+++|+..+..+ .||+.|++-.+
T Consensus 125 ~~~~~~tk~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 169 (564)
T 2q28_A 125 NAAKPYAKAAFRVN--QPQDLGIALARAIRVSVSGRPGGVYLDLPAN 169 (564)
T ss_dssp HHHGGGSSEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHhhheeeecC--CHHHHHHHHHHHHHHHhcCCCceEEEEcCHH
Confidence 66666666666775 4457888899999999884 59999988654
No 64
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=91.96 E-value=0.24 Score=50.56 Aligned_cols=109 Identities=14% Similarity=0.138 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-ccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~~~q~~~~d~~ 280 (361)
-+|.|.+.+. +.-.++++..|=|..+. ...+..|...++|+|+|.-+-.... +. ........|..
T Consensus 61 ~~A~GyAr~t----------g~pgv~~~TsGpG~~N~---~~~i~~A~~~~vPll~itg~~~~~~~~~-~~~~~Q~~dq~ 126 (568)
T 2c31_A 61 YAASIAGYIE----------GKPGVCLTVSAPGFLNG---VTSLAHATTNCFPMILLSGSSEREIVDL-QQGDYEEMDQM 126 (568)
T ss_dssp HHHHHHHHHH----------SSCEEEEECSHHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHT-TCCCTTCCCHH
T ss_pred HHHHHHHHHh----------CCCEEEEEcCCccHHHH---HHHHHHHHhcCCCEEEEccCCCccccCC-CCCcccccCHH
Confidence 3466666652 22234555556666652 5678899999999999988764221 10 01111224566
Q ss_pred hccccCCccEEEEeCCCHHHHHHHHHHHHHHHHc-CCCCEEEEEEEe
Q 018048 281 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARR-GEGPTLVECETY 326 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~-~~gP~lIev~t~ 326 (361)
.+.+.+--....+. ++.++...+.+|+..+.. ..||+.|++-.+
T Consensus 127 ~~~~~~tk~~~~v~--~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 171 (568)
T 2c31_A 127 NVARPHCKASFRIN--SIKDIPIGIARAVRTAVSGRPGGVYVDLPAK 171 (568)
T ss_dssp HHSGGGSSEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEETH
T ss_pred HHHHhhhheeeecC--CHHHHHHHHHHHHHHhcCCCCceEEEeCCHH
Confidence 67766666666665 455788899999999987 459999988654
No 65
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=91.84 E-value=0.89 Score=46.81 Aligned_cols=107 Identities=19% Similarity=0.180 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEE--EEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcch
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTL--AFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 279 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv--~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~ 279 (361)
-+|.|.+.+ ..+++.+ +..|=|..+. .-.+..|...++|+|+|+-+-..... ........|.
T Consensus 79 ~~A~GyAr~-----------tgg~~~v~~~TsGpG~~N~---~~~l~~A~~~~vPlvvItg~~p~~~~--~~~~~Q~~d~ 142 (616)
T 2pan_A 79 HMAEGYTRA-----------TAGNIGVCLGTSGPAGTDM---ITALYSASADSIPILCITGQAPRARL--HKEDFQAVDI 142 (616)
T ss_dssp HHHHHHHHH-----------STTCCEEEEECSTHHHHTS---HHHHHHHHHTTCCEEEEEEECCGGGT--TTTCTTCCCH
T ss_pred HHHHHHHHh-----------cCCCceEEEeCCCchHHHH---HHHHHHHHhcCCCEEEEecCCccccc--CcccccccCH
Confidence 456677766 2244444 4456665653 56789999999999999887652211 1111123566
Q ss_pred hhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcC-CCCEEEEEEEe
Q 018048 280 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRG-EGPTLVECETY 326 (361)
Q Consensus 280 ~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~-~gP~lIev~t~ 326 (361)
..+++.+--..+.+. ++.++...+++|+..+..+ .||+.|++-.+
T Consensus 143 ~~~~~~~tk~~~~v~--~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~d 188 (616)
T 2pan_A 143 EAIAKPVSKMAVTVR--EAALVPRVLQQAFHLMRSGRPGPVLVDLPFD 188 (616)
T ss_dssp HHHHGGGSSEEEECC--SGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred HHHHHHHHHhhcccC--CHHHHHHHHHHHHHHHhcCCCceEEEEcchh
Confidence 677777666666664 4558888999999988876 49999998654
No 66
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=90.09 E-value=0.66 Score=47.32 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-cccc-ccc---c-C
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSH-LRA---T-S 275 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~-~~q---~-~ 275 (361)
-+|.|.+.+. + -.++++..|=|..+. .-.+..|...++|+|+|+-+..... +... ..| . .
T Consensus 77 ~~A~GyAr~t----------G-~~v~~~tsGpG~~N~---~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~ 142 (570)
T 2vbf_A 77 YMADGYARTK----------K-AAAFLTTFGVGELSA---INGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGD 142 (570)
T ss_dssp HHHHHHHHHH----------S-CEEEEEETTHHHHHH---HHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSC
T ss_pred HHHHHHHHHh----------C-CeEEEEcCCCCHHHH---HHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccc
Confidence 4577777652 3 334455556665552 5578889999999999998765221 1100 000 0 1
Q ss_pred CcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 018048 276 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 326 (361)
Q Consensus 276 ~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~ 326 (361)
..+...+.+.+--..+.+.. .++...+++|+..+....||+.|++-.+
T Consensus 143 ~~~~~~~~~~~tk~~~~v~~---~~~~~~l~~A~~~A~~~~GPV~l~iP~d 190 (570)
T 2vbf_A 143 FKHFMKMHEPVTAARTLLTA---ENATYEIDRVLSQLLKERKPVYINLPVD 190 (570)
T ss_dssp CCHHHHHTGGGCSEEEECCT---TTHHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_pred hHHHHHHhhhhEEEEEEECc---ccHHHHHHHHHHHHhhCCCCEEEEcchh
Confidence 12345667777667777765 3677788889988887789999999764
No 67
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=89.56 E-value=0.63 Score=47.35 Aligned_cols=109 Identities=9% Similarity=0.018 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-cc--ccc---cccC
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GM--SHL---RATS 275 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~--~~~---~q~~ 275 (361)
-+|.|.+.+. + -.++++..|=|+.+. .-.+..|...++|+|+|+-+-.... .. ..+ .+..
T Consensus 56 ~~A~Gyar~t----------g-~~v~~~TsGpG~~N~---~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~ 121 (563)
T 2vk8_A 56 YAADGYARIK----------G-MSCIITTFGVGELSA---LNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGD 121 (563)
T ss_dssp HHHHHHHHHH----------S-CEEEEEETTHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSC
T ss_pred HHHHHHHHhh----------C-CcEEEEcCCCcHHHH---HHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcc
Confidence 4566766662 3 234555557777662 5578889999999999987654211 00 000 0011
Q ss_pred CcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 018048 276 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 326 (361)
Q Consensus 276 ~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~ 326 (361)
..+...+.+.+--....+...+ ++.+.+.+|+..+....||+.|++-.+
T Consensus 122 ~q~~~~~~~~~~k~~~~v~~~~--~~~~~i~~A~~~A~~~~GPV~l~iP~d 170 (563)
T 2vk8_A 122 FTVFHRMSANISETTAMITDIA--TAPAEIDRCIRTTYVTQRPVYLGLPAN 170 (563)
T ss_dssp SSHHHHHHHTTCSEEEECCCTT--THHHHHHHHHHHHHHHTSCEEEEEETT
T ss_pred hHHHHHHhhhhEEEEEEeCCHH--HHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 1245667777766667776544 677788888888887779999998764
No 68
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=89.49 E-value=0.69 Score=46.88 Aligned_cols=108 Identities=12% Similarity=0.046 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-ccc--cc---cccC
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMS--HL---RATS 275 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~--~~---~q~~ 275 (361)
-+|.|.+.+. + -.++++..|=|..+. .-.+..|...++|+|+|+-+-.... +.. .. ....
T Consensus 57 ~~A~Gyar~t----------g-~~v~~~tsGpG~~N~---~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~ 122 (552)
T 1ovm_A 57 YAADGYARCK----------G-FAALLTTFGVGELSA---MNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGE 122 (552)
T ss_dssp HHHHHHHHHH----------S-CEEEEEETTHHHHHT---HHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSC
T ss_pred HHHHHHHHhh----------C-CcEEEEccCCcHHHH---HHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCCc
Confidence 4577777762 3 235556667776552 5678899999999999988654221 100 00 0001
Q ss_pred CcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEe
Q 018048 276 DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 326 (361)
Q Consensus 276 ~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~ 326 (361)
..+..++.+.+-...+.|.. + ++...+++|+..+....||+.|++-.+
T Consensus 123 ~q~~~~~~~~~tk~~~~v~~-~--~~~~~i~~A~~~a~~~~GPV~l~iP~d 170 (552)
T 1ovm_A 123 FRHFYHMSEPITVAQAVLTE-Q--NACYEIDRVLTTMLRERRPGYLMLPAD 170 (552)
T ss_dssp CSHHHHHTGGGCSEEEECCT-T--THHHHHHHHHHHHHHHTCCEEEEEEHH
T ss_pred HHHHHHHHHhheeEEEEEcc-c--cHHHHHHHHHHHHHhCCCCEEEEeehh
Confidence 12455677777777777865 3 666778888888877679999999764
No 69
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=88.84 E-value=1.3 Score=46.29 Aligned_cols=102 Identities=18% Similarity=0.077 Sum_probs=59.7
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
+.+|.|+|+. +.-+++++.+...+.. ..+.+..++..++||++++.+.+++.+..-....+..|++
T Consensus 415 v~~a~GlA~~-----------gG~~P~~~tf~~F~~~---~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tHq~~edla 480 (669)
T 2r8o_A 415 TAIANGISLH-----------GGFLPYTSTFLMFVEY---ARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVA 480 (669)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGGGT---THHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCSSHHH
T ss_pred HHHHHHHHHc-----------CCCeEEEeehHHHHHH---HHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCccCCHHHHH
Confidence 3567777765 4446666666554332 2566888999999999998887765442211111223333
Q ss_pred hccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcC-CCCEEEEE
Q 018048 281 KKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRG-EGPTLVEC 323 (361)
Q Consensus 281 ~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~-~gP~lIev 323 (361)
-+. .+|+.+| .-.|..++...++.| .+. ++|++|-.
T Consensus 481 ~lr---~iP~l~V~~Pad~~E~~~~l~~a----~~~~~~Pv~i~~ 518 (669)
T 2r8o_A 481 SLR---VTPNMSTWRPCDQVESAVAWKYG----VERQDGPTALIL 518 (669)
T ss_dssp HHH---TSTTCEEECCSSHHHHHHHHHHH----HHCSSSCEEEEC
T ss_pred Hhc---CCCCCEEEecCCHHHHHHHHHHH----HHhCCCcEEEEe
Confidence 332 3555544 345666665555544 444 78999843
No 70
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=88.82 E-value=0.9 Score=47.17 Aligned_cols=101 Identities=18% Similarity=0.121 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 281 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~ 281 (361)
.+|+|+|++ +..+++++.++++.. .. ++.+.+++..++|+++++.+-+++.+.....+.+..|++-
T Consensus 369 ~~a~G~A~~-----------G~~~~~~~~f~~Fl~-~a--~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~~~ed~a~ 434 (616)
T 3mos_A 369 SIAVGCATR-----------NRTVPFCSTFAAFFT-RA--FDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAM 434 (616)
T ss_dssp HHHHHHHGG-----------GCCEEEEEEEGGGGG-GG--HHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGCBSSHHHH
T ss_pred HHHHHHHHc-----------CCCCEEEEehHHHHH-HH--HHHHHHHHHhCCCeEEEEECCCccccCCCCcccCHHHHHH
Confidence 455666655 333567778998864 33 7788888899999998877666544432112222333333
Q ss_pred ccccCCccEEEEe-CCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 018048 282 KGPAFGMPGFHVD-GMDVLKVREVAKEAIERARRGEGPTLVEC 323 (361)
Q Consensus 282 ~A~a~Gi~~~~Vd-g~D~~~v~~al~~Al~~ar~~~gP~lIev 323 (361)
+. .+|++.|- -.|+.++.. +++.+.+.++|++|..
T Consensus 435 l~---~iP~l~V~~P~d~~e~~~----~l~~a~~~~gp~~ir~ 470 (616)
T 3mos_A 435 FR---SVPTSTVFYPSDGVATEK----AVELAANTKGICFIRT 470 (616)
T ss_dssp HH---TSTTEEEECCCSHHHHHH----HHHHHHTCCSEEEEEC
T ss_pred hc---CCCCCEEEecCCHHHHHH----HHHHHHhcCCCEEEEE
Confidence 32 46777553 446666554 4455556689987743
No 71
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=88.04 E-value=1.3 Score=45.94 Aligned_cols=100 Identities=17% Similarity=0.261 Sum_probs=59.2
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccccc--ccccccCCcc
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDPQ 278 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~--~~~~q~~~~d 278 (361)
+.+|+|+|++ .-++++.++++.. +-.+-|-++.++..++||++++.+.++ .+. +++. ...|
T Consensus 374 ~~~a~G~A~~------------G~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~-~g~~G~tH~--~~~d 436 (621)
T 2o1s_A 374 VTFAAGLAIG------------GYKPIVAIYSTFL--QRAYDQVLHDVAIQKLPVLFAIDRAGI-VGADGQTHQ--GAFD 436 (621)
T ss_dssp HHHHHHHHHT------------TCEEEEEEETTGG--GGGHHHHHHTTTTTTCCCEEEEESCBC-CCTTCGGGC--BCSH
T ss_pred HHHHHHHHHC------------CCEEEEEehHhHH--HHHHHHHHHHHHhcCCCEEEEEECCcc-CCCCCCccC--chHH
Confidence 4467777765 3577888888864 322234577789999999999977663 221 2221 2234
Q ss_pred hhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 018048 279 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 323 (361)
Q Consensus 279 ~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lIev 323 (361)
+.-+. .+|++.| .-.|+.+++..++.|++. .++|++|-.
T Consensus 437 ~~~~~---~iP~l~v~~P~d~~e~~~~l~~a~~~---~~~Pv~i~~ 476 (621)
T 2o1s_A 437 LSYLR---CIPEMVIMTPSDENECRQMLYTGYHY---NDGPSAVRY 476 (621)
T ss_dssp HHHTT---TSTTCEEECCSSHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred HHHHh---cCCCCEEEecCCHHHHHHHHHHHHHc---CCCCEEEEe
Confidence 33332 3444433 345666766666655532 278998855
No 72
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=87.42 E-value=1.6 Score=45.44 Aligned_cols=102 Identities=21% Similarity=0.182 Sum_probs=59.8
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
+.+|.|+|+. +.-++++..+.=.+. ...+.+..++..++||++++.+.+++.+..-.......|++
T Consensus 410 ~~~a~GlA~~-----------Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tHq~~edla 475 (651)
T 2e6k_A 410 GAILNGLNLH-----------GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTHQPVEHLM 475 (651)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHHH
T ss_pred HHHHHHHHHc-----------CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCccccHHHHH
Confidence 3467787776 435677776633222 12566888999999999998888766542211111223333
Q ss_pred hccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcC-CCCEEEEE
Q 018048 281 KKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRG-EGPTLVEC 323 (361)
Q Consensus 281 ~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~-~gP~lIev 323 (361)
-+. .+|+..| .-.|..++...++.|+ +. ++|++|-.
T Consensus 476 ~lr---~iP~l~V~~Pad~~E~~~~l~~A~----~~~~~Pv~i~~ 513 (651)
T 2e6k_A 476 SLR---AMPNLFVIRPADAYETFYAWLVAL----RRKEGPTALVL 513 (651)
T ss_dssp HHH---TSTTCEEECCSSHHHHHHHHHHHH----HCCSSCEEEEC
T ss_pred Hhc---CCCCcEEEecCCHHHHHHHHHHHH----HcCCCCEEEEE
Confidence 322 3555544 3456666655555554 43 68998865
No 73
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=87.30 E-value=2.4 Score=42.96 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccc-ccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~i-s~~~~~q~~~~d~~ 280 (361)
=+|.|.+.+. +.-.++++..|=|+.+. .-.+..|...++|+|+|.-+-.... +. ......|..
T Consensus 60 ~~AdGyAr~t----------G~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~~~~~~g~---~~~Q~~d~~ 123 (556)
T 3hww_A 60 HLALGLAKVS----------KQPVAVIVTSGTAVANL---YPALIEAGLTGEKLILLTADRPPELIDC---GANQAIRQP 123 (556)
T ss_dssp HHHHHHHHHH----------CSCEEEEECSSHHHHTT---HHHHHHHHHHCCCEEEEEEECCGGGSSS---SCTTCCCCT
T ss_pred HHHHHHHHhh----------CCCEEEEECCCcHHHhh---hHHHHHHHHhCCCeEEEeCCCCHHHhcc---CCCccccHH
Confidence 3466766662 23345555567777763 5679999999999999987654221 11 111224556
Q ss_pred hccccCCccEEEEeCCC----HHHHHHHHHHHHHHHHcCCCCEEEEEEE
Q 018048 281 KKGPAFGMPGFHVDGMD----VLKVREVAKEAIERARRGEGPTLVECET 325 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vdg~D----~~~v~~al~~Al~~ar~~~gP~lIev~t 325 (361)
.+.+.+--..+.|...+ ..++.+++++|+. ....||+.|++-.
T Consensus 124 ~~~~~~tk~~~~v~~~~~~~~~~~i~~~i~~A~~--~~r~GPV~i~iP~ 170 (556)
T 3hww_A 124 GMFASHPTHSISLPRPTQDIPARWLVSTIDHALG--TLHAGGVHINCPF 170 (556)
T ss_dssp TTTTTCSSEEEECCCCCTTSCHHHHHHHHHHHHH--SCCSSCEEEEEEC
T ss_pred HHHhhheeEEEecCCCcccccHHHHHHHHHHHHh--cCCCCCEEEeCCc
Confidence 66666655566665443 2345566666662 1235899999975
No 74
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=87.17 E-value=1.4 Score=46.15 Aligned_cols=101 Identities=16% Similarity=0.126 Sum_probs=60.1
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
+.+|.|+|+. +.-++++.++.+-... ..+.+..++..++||+++....+++.+..-....+..|++
T Consensus 416 v~~a~GlA~~-----------gG~~P~~~tf~~F~~~---~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq~~ed~a 481 (663)
T 3kom_A 416 AAIMNGLSLY-----------GGIKPYGGTFLVFSDY---SRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQPIEHVP 481 (663)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGHHH---HHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCSSHHH
T ss_pred HHHHHHHHHc-----------CCCEEEEEehHHHHHH---HHHHHHHHHhcCCCEEEEEeCCccccCCCCCCcCCHHHHH
Confidence 3567777765 4566777776554321 2566777889999999998877755543221222233433
Q ss_pred hccccCCccEEEEe-CCCHHHHHHHHHHHHHHHHc-CCCCEEEE
Q 018048 281 KKGPAFGMPGFHVD-GMDVLKVREVAKEAIERARR-GEGPTLVE 322 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vd-g~D~~~v~~al~~Al~~ar~-~~gP~lIe 322 (361)
-+. .+|+++|= -.|..++.. +++.+.+ .++|++|-
T Consensus 482 ~lr---~iPnl~V~~Pad~~e~~~----~l~~A~~~~~~Pv~ir 518 (663)
T 3kom_A 482 SLR---LIPNLSVWRPADTIETMI----AWKEAVKSKDTPSVMV 518 (663)
T ss_dssp HHH---TSTTCEEECCCSHHHHHH----HHHHHHHCSSCCEEEE
T ss_pred HHh---cCCCcEEEeeCCHHHHHH----HHHHHHHhCCCCEEEE
Confidence 332 46666543 346555544 4445555 68999984
No 75
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=85.85 E-value=1.5 Score=46.03 Aligned_cols=101 Identities=13% Similarity=0.125 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCc-eEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDH-VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~-~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
.+|.|+|+. +.-+ +++..+.+-+. .....+..++..++||++++...+++.+..-....+..|++
T Consensus 423 g~a~GlA~~-----------Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tHq~~edla 488 (680)
T 1gpu_A 423 AIMNGISAF-----------GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTHQPIETLA 488 (680)
T ss_dssp HHHHHHHHH-----------CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHHH
T ss_pred HHHHHHHhc-----------CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCccCCHHHHH
Confidence 467777776 4345 66665533221 12566888899999999998877755542211111223333
Q ss_pred hccccCCccEEEEe-CCCHHHHHHHHHHHHHHHHcC-CCCEEEEE
Q 018048 281 KKGPAFGMPGFHVD-GMDVLKVREVAKEAIERARRG-EGPTLVEC 323 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vd-g~D~~~v~~al~~Al~~ar~~-~gP~lIev 323 (361)
-+ -.+|+++|= -.|..++...++. +.+. ++|++|-.
T Consensus 489 ~l---r~iP~l~V~~Pad~~e~~~~l~~----A~~~~~~Pv~i~~ 526 (680)
T 1gpu_A 489 HF---RSLPNIQVWRPADGNEVSAAYKN----SLESKHTPSIIAL 526 (680)
T ss_dssp HH---HTSSSCEEECCCSHHHHHHHHHH----HHHCSSCCEEEEC
T ss_pred Hh---cCCCCCEEEecCCHHHHHHHHHH----HHHhCCCcEEEEe
Confidence 32 245666553 3466665554544 4444 79999843
No 76
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=85.14 E-value=1.6 Score=45.39 Aligned_cols=102 Identities=16% Similarity=0.049 Sum_probs=60.3
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
+.+|.|+|+. +.-++++.++.+ |.+ ...+.+..++..++||+++....+++.+..-....+..|++
T Consensus 395 v~~a~GlA~~-----------gG~~P~~~~f~~--F~~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~THq~~ed~a 460 (632)
T 3l84_A 395 AAINNAFARY-----------GIFLPFSATFFI--FSE-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQLS 460 (632)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGG--GHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGSCSSHHH
T ss_pred HHHHHHHHHc-----------CCCEEEEEecHH--HHH-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCCCCHhHHH
Confidence 3566777765 445677776654 332 22566777889999999998877765543222222333433
Q ss_pred hccccCCccEEEEe-CCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 018048 281 KKGPAFGMPGFHVD-GMDVLKVREVAKEAIERARRGEGPTLVEC 323 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vd-g~D~~~v~~al~~Al~~ar~~~gP~lIev 323 (361)
-+. .+|+++|= -.|..++...++.| .+.++|++|-.
T Consensus 461 ~lr---~iP~l~V~~P~d~~e~~~~l~~A----~~~~~Pv~ir~ 497 (632)
T 3l84_A 461 TFR---AMPNFLTFRPADGVENVKAWQIA----LNADIPSAFVL 497 (632)
T ss_dssp HHH---HSSSCEEECCSSHHHHHHHHHHH----HHCSSCEEEEC
T ss_pred HHh---cCCCCEEEecCCHHHHHHHHHHH----HhCCCCEEEEE
Confidence 332 45666543 34666655555554 44789998854
No 77
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=84.14 E-value=1.4 Score=45.68 Aligned_cols=99 Identities=17% Similarity=0.241 Sum_probs=58.2
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccccc--ccccccCCcc
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDPQ 278 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~--~~~~q~~~~d 278 (361)
+.+|+|+|++ .-++++.++.+.. +-.+-|-++.++..++||++++.+.++ .+. +++. ...|
T Consensus 377 ~~~a~G~A~~------------G~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~-~g~dG~tH~--~~~d 439 (629)
T 2o1x_A 377 VTTAAGMALQ------------GMRPVVAIYSTFL--QRAYDQVLHDVAIEHLNVTFCIDRAGI-VGADGATHN--GVFD 439 (629)
T ss_dssp HHHHHHHHHT------------TCEEEEEEEHHHH--GGGHHHHHHTTTTTTCCCEEEEESBBC-CCTTCTTTC--BCSH
T ss_pred HHHHHHHHHc------------CCEEEEEecHHHH--HHHHHHHHHHHhhcCCCEEEEEECCcc-CCCCCcccC--ccHH
Confidence 3467777775 3567777777643 322235577789999999999976653 221 1111 1234
Q ss_pred hhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 018048 279 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 323 (361)
Q Consensus 279 ~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lIev 323 (361)
++-+. .+|+..| .-.|+.+++..++.|++ .++|++|-.
T Consensus 440 ~a~~r---~iP~l~v~~P~d~~e~~~~~~~a~~----~~~Pv~i~~ 478 (629)
T 2o1x_A 440 LSFLR---SIPGVRIGLPKDAAELRGMLKYAQT----HDGPFAIRY 478 (629)
T ss_dssp HHHTT---TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEEC
T ss_pred HHHHH---ccCCcEEEecCCHHHHHHHHHHHHh----CCCCEEEEe
Confidence 33332 3444433 34576776666666554 478999865
No 78
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=83.22 E-value=1.8 Score=45.38 Aligned_cols=101 Identities=15% Similarity=0.102 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcC-CCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 202 PVATGAAFTSKYRREVLKEAD-CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~-~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
.+|.|+|+. + .-++++.++.+.+. ...+.+..++..++||++++...+++.+..-....+..|++
T Consensus 428 ~~a~GlA~~-----------G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tHq~~edla 493 (675)
T 1itz_A 428 AICNGIALH-----------SPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLV 493 (675)
T ss_dssp HHHHHHHTT-----------CTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHHH
T ss_pred HHHHHHHhc-----------CCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCcCcHHHHH
Confidence 466676665 3 25677777655432 22566888999999999999877655442211111223333
Q ss_pred hccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcC-CCCEEEEE
Q 018048 281 KKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRG-EGPTLVEC 323 (361)
Q Consensus 281 ~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~-~gP~lIev 323 (361)
-+ -.+|+++| .-.|..++...++. +.+. ++|++|-.
T Consensus 494 ~l---r~iP~l~V~~Pad~~e~~~~l~~----a~~~~~~Pv~i~~ 531 (675)
T 1itz_A 494 SF---RAMPNILMLRPADGNETAGAYKV----AVLNRKRPSILAL 531 (675)
T ss_dssp HH---HSSSSCEEECCCSHHHHHHHHHH----HHHCTTSCEEEEE
T ss_pred Hh---ccCCCeEEEECCCHHHHHHHHHH----HHHhCCCcEEEEe
Confidence 32 24666655 34566665555544 4444 78999854
No 79
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=83.06 E-value=3.2 Score=43.44 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhh
Q 018048 202 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 281 (361)
Q Consensus 202 P~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~ 281 (361)
.+|.|+|+. +.-++++.++..-+. .....+..++..++||++++...+++.+..-....+..+++-
T Consensus 416 ~~a~GlA~~-----------GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tHq~~edla~ 481 (673)
T 1r9j_A 416 AILNGLDAH-----------DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTHQPVELVAA 481 (673)
T ss_dssp HHHHHHHHH-----------SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHHHH
T ss_pred HHHHHHHhc-----------CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCcccCCHHHHHH
Confidence 356776665 334667776644332 225668889999999999987777655422111112233333
Q ss_pred ccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcC-CCCEEEEE
Q 018048 282 KGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRG-EGPTLVEC 323 (361)
Q Consensus 282 ~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~-~gP~lIev 323 (361)
+. .+|+++| .-.|..++...++.| .+. ++|++|-.
T Consensus 482 lr---~iP~l~V~~Pad~~e~~~~l~~a----~~~~~~Pv~i~~ 518 (673)
T 1r9j_A 482 LR---AMPNLQVIRPSDQTETSGAWAVA----LSSIHTPTVLCL 518 (673)
T ss_dssp HH---HSTTCEEECCSSHHHHHHHHHHH----HHCTTCCEEEEC
T ss_pred Hc---CCCCCEEEeCCCHHHHHHHHHHH----HHhCCCeEEEEE
Confidence 22 3565554 345666655555544 443 78999853
No 80
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=82.82 E-value=3.5 Score=43.38 Aligned_cols=102 Identities=20% Similarity=0.145 Sum_probs=57.4
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
+.+|.|+|+. +.-++++..+.- |.. ....++.+++..++||+|++...+++.+..-....+..|++
T Consensus 440 v~~A~GlA~~-----------gG~~P~~~tf~~--Fs~-f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq~ied~a 505 (690)
T 3m49_A 440 GAAMNGIALH-----------GGLKTYGGTFFV--FSD-YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHEPIEQLA 505 (690)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGG--GGG-GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGCCSSHHH
T ss_pred HHHHHHHHHc-----------CCCEEEEEecHH--HHH-HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCccCCHHHHH
Confidence 3566777765 345666654422 121 01345677889999999999887755543222222333443
Q ss_pred hccccCCccEEEEe-CCCHHHHHHHHHHHHHHHHcC-CCCEEEEE
Q 018048 281 KKGPAFGMPGFHVD-GMDVLKVREVAKEAIERARRG-EGPTLVEC 323 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vd-g~D~~~v~~al~~Al~~ar~~-~gP~lIev 323 (361)
-+. .+|+++|= -.|..++.. +++.+.+. ++|++|-.
T Consensus 506 ~lr---~iPnl~V~~Pad~~E~~~----~l~~Ai~~~~~Pv~ir~ 543 (690)
T 3m49_A 506 ALR---AMPNVSVIRPADGNESVA----AWRLALESTNKPTALVL 543 (690)
T ss_dssp HHH---TSTTCEEECCSSHHHHHH----HHHHHHHCSSSCEEEEC
T ss_pred HHh---cCCCCEEEeeCCHHHHHH----HHHHHHHcCCCCEEEEe
Confidence 332 46666543 346556544 44445554 78999843
No 81
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=81.23 E-value=2.4 Score=40.50 Aligned_cols=98 Identities=21% Similarity=0.123 Sum_probs=54.9
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEE-ECCCcccCcchHHHHHHh-h--------hCCCCeEEEEEcCCccc-cc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNMA-A--------LWKLPIVFVVENNLWAI-GM 268 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~-~GDGs~~~g~~~eeL~tA-~--------~~~LPvi~VV~NN~y~i-s~ 268 (361)
.+..|.|+|++ .-++++.+ ++|.. +.. ++.+-.. + ..++||++++.+ ++.- ..
T Consensus 74 ~v~~a~G~A~~------------G~rp~~~~~f~~F~-~~a--~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G 137 (341)
T 2ozl_B 74 FAGIAVGAAMA------------GLRPICEFMTFNFS-MQA--IDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVA 137 (341)
T ss_dssp HHHHHHHHHHT------------TCEEEEECSSGGGG-GGG--HHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCC
T ss_pred HHHHHHHHHHC------------CCEEEEEeccHHHH-HHH--HHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCC
Confidence 34567777775 24555553 88876 332 5555543 3 389999999885 6211 11
Q ss_pred ccccccCCcchhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 018048 269 SHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 323 (361)
Q Consensus 269 ~~~~q~~~~d~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lIev 323 (361)
+++.| ..+ .+.+ .+|+..| .-.|+.+++..++.|+ +.++|++|-.
T Consensus 138 ~tHs~--~~e--a~l~--~iP~l~V~~Psd~~e~~~~l~~a~----~~~~Pv~i~~ 183 (341)
T 2ozl_B 138 AQHSQ--CFA--AWYG--HCPGLKVVSPWNSEDAKGLIKSAI----RDNNPVVVLE 183 (341)
T ss_dssp GGGCC--CCH--HHHH--TSTTCEEECCCSHHHHHHHHHHHH----HSSSCEEEEE
T ss_pred cchhh--HHH--HHhc--cCCCCEEEEeCCHHHHHHHHHHHH----hcCCCEEEEE
Confidence 22212 223 2222 3455433 3457777766666655 4578998865
No 82
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=79.28 E-value=3.2 Score=40.18 Aligned_cols=98 Identities=21% Similarity=0.124 Sum_probs=50.4
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEE-ECCCcccCcchHHHHHH-hhhC--------CCCeEEEEEcCCccccccc
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNM-AALW--------KLPIVFVVENNLWAIGMSH 270 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~-~GDGs~~~g~~~eeL~t-A~~~--------~LPvi~VV~NN~y~is~~~ 270 (361)
+..|.|+|++ .-++++.+ ++|.. +.. ++.+.. ++.+ ++||++++.+-+ ..+-..
T Consensus 111 v~~a~G~A~~------------G~rpv~~~tf~~Fl-~~a--~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg-~~g~g~ 174 (369)
T 1ik6_A 111 LGFAMGMAMA------------GLKPVAEIQFVDFI-WLG--ADELLNHIAKLRYRSGGNYKAPLVVRTPVGS-GTRGGL 174 (369)
T ss_dssp HHHHHHHHHT------------TCEEEEECCCC-----CC--HHHHHHHHHHHHC------CCCCEEEEEECC-------
T ss_pred HHHHHHHHHC------------CCeeEEEecchhHH-HHH--HHHHHHHHHHHHHhhCCCCCCCEEEEEeCCC-CCCCCc
Confidence 4567777775 24566654 88866 332 555544 5544 999999988665 222111
Q ss_pred ccccCCcchhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 018048 271 LRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 323 (361)
Q Consensus 271 ~~q~~~~d~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lIev 323 (361)
.....+ ..+.+ .+|++.| .-.|+.++...++.|+ +.++|++|-.
T Consensus 175 --~hs~~~-~a~l~--~iPnl~V~~Psd~~e~~~ll~~A~----~~~~Pv~i~~ 219 (369)
T 1ik6_A 175 --YHSNSP-EAIFV--HTPGLVVVMPSTPYNAKGLLKAAI----RGDDPVVFLE 219 (369)
T ss_dssp -------H-HHHHH--TCTTCEEECCCSHHHHHHHHHHHH----HSSSCEEEEE
T ss_pred --cccccH-HHHHc--CCCCcEEEecCCHHHHHHHHHHHH----hCCCCEEEEE
Confidence 111122 22222 3455533 3457777766666655 3678999853
No 83
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=78.43 E-value=4.2 Score=42.96 Aligned_cols=101 Identities=17% Similarity=0.120 Sum_probs=58.5
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
+.+|.|.|+. +.-++++.++.+ |.+ ...+.+..++..++||+++....+++.+..-....+..|++
T Consensus 461 v~~AaGlA~~-----------~G~~Pv~~~f~~--F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~THq~~ed~a 526 (711)
T 3uk1_A 461 SAAINGLVLH-----------GGYKPFGGTFLT--FSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTHQSVEHVA 526 (711)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGG--GHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHHH
T ss_pred HHHHHHHHHc-----------CCCEEEEEEhHH--HHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCccCChhHHH
Confidence 3467777763 345666665532 442 12456777788999999999877755443221122233433
Q ss_pred hccccCCccEEEEe-CCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 018048 281 KKGPAFGMPGFHVD-GMDVLKVREVAKEAIERARRGEGPTLVE 322 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vd-g~D~~~v~~al~~Al~~ar~~~gP~lIe 322 (361)
-+ -.+|+++|= -.|..++...++.| .+.++|++|-
T Consensus 527 ~l---r~iPnl~V~~Pad~~E~~~~l~~A----i~~~~Pv~ir 562 (711)
T 3uk1_A 527 SL---RLIPNLDVWRPADTVETAVAWTYA----VAHQHPSCLI 562 (711)
T ss_dssp HH---HTSTTCEEECCSSHHHHHHHHHHH----HHSSSCEEEE
T ss_pred HH---hcCCCCEEEecCCHHHHHHHHHHH----HhcCCCEEEE
Confidence 32 246666553 34666655555554 4478999884
No 84
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=75.78 E-value=5.2 Score=37.92 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=56.3
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEE-ECCCcccCcchHHHHH-Hhhh--------CCCCeEEEEEcCCcccccc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAAL--------WKLPIVFVVENNLWAIGMS 269 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~-~GDGs~~~g~~~eeL~-tA~~--------~~LPvi~VV~NN~y~is~~ 269 (361)
.+.+|.|+|++ + -++++.+ ++++. +.. ++.+- .++. +++|+++++.+-+ +...+
T Consensus 64 ~~~~a~G~A~~-----------G-~rp~~~~t~~~F~-~~a--~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~ 127 (338)
T 1qs0_B 64 IVGTAVGMGAY-----------G-LRPVVEIQFADYF-YPA--SDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGG 127 (338)
T ss_dssp HHHHHHHHHHH-----------T-CEEEEECSCGGGC-GGG--HHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCC
T ss_pred HHHHHHHHHhC-----------C-CEEEEEeccHhHH-HHH--HHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCc
Confidence 35668888887 2 4555544 88886 333 55554 3443 3599999986554 22211
Q ss_pred cccccCCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEE
Q 018048 270 HLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECE 324 (361)
Q Consensus 270 ~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~ 324 (361)
. ..+..|+.-+..--|+..+. -.|+.+++..++.|++ .++|++|-..
T Consensus 128 t--h~s~~d~~~l~~iP~l~V~~--Psd~~e~~~~l~~A~~----~~~Pv~i~~p 174 (338)
T 1qs0_B 128 Q--THSQSPEAMFTQVCGLRTVM--PSNPYDAKGLLIASIE----CDDPVIFLEP 174 (338)
T ss_dssp S--SSSCCCHHHHTTSTTCEEEC--CCSHHHHHHHHHHHHH----SSSCEEEEEE
T ss_pred c--cccccHHHHHhcCCCCEEEe--eCCHHHHHHHHHHHHh----cCCcEEEEEc
Confidence 1 11222443333222554443 4566777766666654 4789998543
No 85
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=73.50 E-value=11 Score=42.35 Aligned_cols=113 Identities=17% Similarity=0.096 Sum_probs=68.5
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcch
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 279 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~ 279 (361)
.+.+++|++++ +.++++.+--.+++.- .+.|-.++-..+|+|+++.+-. +-++....+....|+
T Consensus 66 A~~aaiGAa~a-------------GaR~~t~Ts~~Gl~lm--~e~l~~~ag~~~P~Vi~va~R~-g~~~glsi~~~hsd~ 129 (1231)
T 2c42_A 66 AAGAVHGALAA-------------GALTTTFTASQGLLLM--IPNMYKISGELLPGVFHVTARA-IAAHALSIFGDHQDI 129 (1231)
T ss_dssp HHHHHHHHHHT-------------TCCEEEEECHHHHHHH--HHHHHHHHHTTCCCEEEEEECC-CCSSSBCCSCCSHHH
T ss_pred HHHHHHHHHHc-------------CChHhhhccHHHHHHH--HHHHHHHhCCCCCEEEEECCCC-ccCCCCcCCCchhhH
Confidence 34678888887 4445555443344422 5677666656899888888776 212111111111222
Q ss_pred hhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEecCCCCC
Q 018048 280 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHS 332 (361)
Q Consensus 280 ~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev~t~R~~gHs 332 (361)
. .++..|++ .+...++.+.+.-+..|..-+.+..-|+++-...+|. +|.
T Consensus 130 ~-~ar~~G~~--vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 130 Y-AARQTGFA--MLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp H-TTTTSSCE--EEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred H-HHhcCCcE--EEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 1 24455654 4456778899888888988888888999976655443 564
No 86
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=69.23 E-value=15 Score=38.64 Aligned_cols=102 Identities=13% Similarity=0.114 Sum_probs=56.7
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchh
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 280 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~ 280 (361)
+.+|.|+|+. +.-++++..+.. |.. .....+.+++..++||+|+....+++.+..-....+..|++
T Consensus 445 v~~A~GlA~~-----------gG~~Pv~~tF~~--F~d-~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~THq~ied~a 510 (700)
T 3rim_A 445 GAILSGIVLH-----------GPTRAYGGTFLQ--FSD-YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTHQPIEHLS 510 (700)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGG--GGG-GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTSCSSHHH
T ss_pred HHHHHHHHHc-----------CCCEEEEEecHH--HHH-HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCccCChhHHH
Confidence 3556677665 344566553322 221 12445778889999999999877765543222222333444
Q ss_pred hccccCCccEEEEe-CCCHHHHHHHHHHHHHHHHcC-C--CCEEEEE
Q 018048 281 KKGPAFGMPGFHVD-GMDVLKVREVAKEAIERARRG-E--GPTLVEC 323 (361)
Q Consensus 281 ~~A~a~Gi~~~~Vd-g~D~~~v~~al~~Al~~ar~~-~--gP~lIev 323 (361)
-+. .+|+++|= -.|..++.. +++.+.+. + +|++|-.
T Consensus 511 ~lr---~iPnl~V~~Pad~~e~~~----~l~~Ai~~~~~~~Pv~ir~ 550 (700)
T 3rim_A 511 ALR---AIPRLSVVRPADANETAY----AWRTILARRNGSGPVGLIL 550 (700)
T ss_dssp HHH---TSTTCEEECCSSHHHHHH----HHHHHHTTTTCSSCEEEEC
T ss_pred HHh---cCCCCEEEeCCCHHHHHH----HHHHHHHccCCCCCEEEEe
Confidence 332 36666553 346555544 44444454 3 6999853
No 87
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=59.58 E-value=36 Score=31.79 Aligned_cols=97 Identities=21% Similarity=0.195 Sum_probs=54.2
Q ss_pred cHHHHHHHHHHHHHHhhhhhcCCCceEEEE-ECCCcccCcchHHHHH-Hhhh--------CCCCeEEEEEcCCccccccc
Q 018048 201 IPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAAL--------WKLPIVFVVENNLWAIGMSH 270 (361)
Q Consensus 201 lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~-~GDGs~~~g~~~eeL~-tA~~--------~~LPvi~VV~NN~y~is~~~ 270 (361)
+..|+|+|++ + -++++.+ +++.. +.. ++.+. .++. .++|+++++. .++......
T Consensus 64 v~~a~G~A~~-----------G-~~p~~~~t~~~F~-~~a--~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~ 127 (324)
T 1umd_B 64 VGAALGMAAH-----------G-LRPVAEIQFADYI-FPG--FDQLVSQVAKLRYRSGGQFTAPLVVRMP-SGGGVRGGH 127 (324)
T ss_dssp HHHHHHHHHH-----------T-CEEEEECSSGGGC-GGG--HHHHHHTTTTHHHHTTTSSCCCCEEEEE-ECSSSSCGG
T ss_pred HHHHHHHHHC-----------C-CEEEEEeccHhHH-HHH--HHHHHHHHHHHHhhcCCCCcCCEEEEEc-CCCCCCCCC
Confidence 4568888877 3 3555554 78875 332 55554 3443 7999998886 342221111
Q ss_pred ccccCCcchhhccccCCccEE-EEeCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 018048 271 LRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVE 322 (361)
Q Consensus 271 ~~q~~~~d~~~~A~a~Gi~~~-~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIe 322 (361)
+.+ ..+. .+.+ .+|+. .+.-.|+.+.+..++.|+ +.++|++|-
T Consensus 128 ~hs--~~~~-a~~~--~iP~~~V~~P~d~~e~~~~l~~a~----~~~~Pv~i~ 171 (324)
T 1umd_B 128 HHS--QSPE-AHFV--HTAGLKVVAVSTPYDAKGLLKAAI----RDEDPVVFL 171 (324)
T ss_dssp GSS--CCCH-HHHH--TSTTCEEEECCSHHHHHHHHHHHH----HCSSCEEEE
T ss_pred ccc--hhHH-HHHh--cCCCCEEEEeCCHHHHHHHHHHHH----hcCCCEEEE
Confidence 111 1232 2222 24443 334567777777666665 367899884
No 88
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=55.86 E-value=25 Score=32.78 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=37.3
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhhC-CCC--eEEEEEcC-CcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENN-LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~-~LP--vi~VV~NN-~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+.+++|.+.|-|+. .++|--+.+. .+| |..||.|+ . +..++|+.+|+|.+.++-
T Consensus 89 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~i~~Visn~p~--------------~~~~~A~~~gIp~~~~~~ 146 (288)
T 3obi_A 89 RRKVMLLVSQSDHC-----LADILYRWRVGDLHMIPTAIVSNHPR--------------ETFSGFDFGDIPFYHFPV 146 (288)
T ss_dssp CEEEEEEECSCCHH-----HHHHHHHHHTTSSCEEEEEEEESSCG--------------GGSCCTTTTTCCEEECCC
T ss_pred CcEEEEEEcCCCCC-----HHHHHHHHHCCCCCeEEEEEEcCCCh--------------hHHHHHHHcCCCEEEeCC
Confidence 44677777887753 5567666544 466 88888887 4 223568889999998864
No 89
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=55.60 E-value=23 Score=33.19 Aligned_cols=97 Identities=15% Similarity=0.062 Sum_probs=54.2
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEE-ECCCcccCcchHHHHH-Hhhh--------CCCCeEEEEEcCCccc-cc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAAL--------WKLPIVFVVENNLWAI-GM 268 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~-~GDGs~~~g~~~eeL~-tA~~--------~~LPvi~VV~NN~y~i-s~ 268 (361)
.+..|+|+|++ .-++++++ ++++. +.. ++.+. .++. .++|+++++. .++.. +.
T Consensus 62 ~v~~a~G~A~~------------G~rp~~~~t~~~F~-~~a--~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g 125 (324)
T 1w85_B 62 IGGLAIGLALQ------------GFRPVPEIQFFGFV-YEV--MDSICGQMARIRYRTGGRYHMPITIRSP-FGGGVHTP 125 (324)
T ss_dssp HHHHHHHHHHT------------TCEEEEBCSSGGGG-GGT--HHHHHTTGGGHHHHTTTSSCCCCEEEEE-ECSSSCCC
T ss_pred HHHHHHHHHhC------------CCEEEEEecchhHH-HHH--HHHHHHHHHHHhhhccCCCcCCEEEEEe-ccCCCCCC
Confidence 34567787776 24555544 77776 333 55554 3444 7999988875 33221 11
Q ss_pred ccccccCCcchhhccccCCccEEE-EeCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 018048 269 SHLRATSDPQIYKKGPAFGMPGFH-VDGMDVLKVREVAKEAIERARRGEGPTLVE 322 (361)
Q Consensus 269 ~~~~q~~~~d~~~~A~a~Gi~~~~-Vdg~D~~~v~~al~~Al~~ar~~~gP~lIe 322 (361)
+++. ..+. .+.+ .+|+.. +.-.|+.+.+..++.|+ +.++|++|-
T Consensus 126 ~~hs---~~~~-a~~~--~iP~l~V~~Psd~~e~~~~l~~a~----~~~~Pv~i~ 170 (324)
T 1w85_B 126 ELHS---DSLE-GLVA--QQPGLKVVIPSTPYDAKGLLISAI----RDNDPVIFL 170 (324)
T ss_dssp TTSS---CCCH-HHHT--TSTTCEEECCSSHHHHHHHHHHHH----HSSSCEEEE
T ss_pred Cccc---ccHH-HHHc--cCCCCEEEeeCCHHHHHHHHHHHH----HcCCCEEEE
Confidence 1211 1222 2222 355543 34567777777666665 367899885
No 90
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=55.59 E-value=20 Score=33.73 Aligned_cols=53 Identities=21% Similarity=0.211 Sum_probs=37.7
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhhC-CCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEe
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 294 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~-~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vd 294 (361)
+.+++|...|.|+. +++|--+.+. .+| |..||.|+. +...+|+.+|+|.+.++
T Consensus 105 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~I~~Visn~~--------------~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 105 KKRVVLMASRESHC-----LADLLHRWHSDELDCDIACVISNHQ--------------DLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHTTCSCSEEEEEEESSS--------------TTHHHHHTTTCCEEECC
T ss_pred CcEEEEEEeCCchh-----HHHHHHHHHCCCCCcEEEEEEECcH--------------HHHHHHHHcCCCEEEcC
Confidence 55778888888752 6667766544 355 888888875 12356888999999984
No 91
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=54.18 E-value=57 Score=27.59 Aligned_cols=73 Identities=11% Similarity=-0.060 Sum_probs=46.1
Q ss_pred CceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEEEcCCccccccc----------cc-----ccCCcchhhccccCCc
Q 018048 224 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSH----------LR-----ATSDPQIYKKGPAFGM 288 (361)
Q Consensus 224 ~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV~NN~y~is~~~----------~~-----q~~~~d~~~~A~a~Gi 288 (361)
...+|+++.||..+.+...+.+..+...+++|..|-.-+.-+...+. .. ......+.++|..-|.
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG 190 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKG 190 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCC
Confidence 45789999999988776677788888888886666553310100000 00 0111236778888888
Q ss_pred cEEEEeCC
Q 018048 289 PGFHVDGM 296 (361)
Q Consensus 289 ~~~~Vdg~ 296 (361)
.++.++..
T Consensus 191 ~~~~~~~~ 198 (218)
T 3ibs_A 191 IYVRVDNS 198 (218)
T ss_dssp EEEEECSS
T ss_pred EEEECCCC
Confidence 88888763
No 92
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=51.21 E-value=21 Score=33.89 Aligned_cols=99 Identities=15% Similarity=0.089 Sum_probs=54.4
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEE-ECCCcccCcchHHHHH-HhhhC--------CC-CeEEEEEcCCccccc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAALW--------KL-PIVFVVENNLWAIGM 268 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~-~GDGs~~~g~~~eeL~-tA~~~--------~L-Pvi~VV~NN~y~is~ 268 (361)
.+.+|+|+|++ + -++++.+ ++++..- . ++.+. .++.+ ++ ||++++..-+ ....
T Consensus 79 ~v~~a~G~A~~-----------G-~rp~~~~tf~~F~~~-a--~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g-~~~G 142 (342)
T 2bfd_B 79 IVGFGIGIAVT-----------G-ATAIAEIQFADYIFP-A--FDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGC-VGHG 142 (342)
T ss_dssp HHHHHHHHHHT-----------T-CCEEEECSSGGGCGG-G--HHHHHTTGGGHHHHTTTSSCCTTEEEEEEESC-CSSC
T ss_pred HHHHHHHHHHC-----------C-CeeEEEecchhHHHH-H--HHHHHHHHHHHHhhhcCCccCCCEEEEEecCC-CCCC
Confidence 35667888876 2 4555544 8887532 2 45543 45543 44 9999877543 2122
Q ss_pred ccccccCCcchhhccccCCccEE-EEeCCCHHHHHHHHHHHHHHHHcCCCCEEEEE
Q 018048 269 SHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVEC 323 (361)
Q Consensus 269 ~~~~q~~~~d~~~~A~a~Gi~~~-~Vdg~D~~~v~~al~~Al~~ar~~~gP~lIev 323 (361)
+.+ .+..|+.-+ + .+|+. .+.-.|+.+.+..++.|++ .++|++|-.
T Consensus 143 ~th--~~~~d~~~l-~--~iP~l~V~~Psd~~e~~~~l~~a~~----~~~Pv~i~~ 189 (342)
T 2bfd_B 143 ALY--HSQSPEAFF-A--HCPGIKVVIPRSPFQAKGLLLSCIE----DKNPCIFFE 189 (342)
T ss_dssp GGG--SSCCCHHHH-H--TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cch--hhHhHHHHH-h--cCCCcEEEeeCCHHHHHHHHHHHHh----cCCcEEEEe
Confidence 221 122343322 2 25544 3345677777776666654 478999844
No 93
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=47.75 E-value=28 Score=32.33 Aligned_cols=55 Identities=13% Similarity=0.024 Sum_probs=37.9
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhh-CCCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAAL-WKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~-~~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+.+++|.+.|-|+. +++|--+.+ -.+| |..||.|+. . . ..++|+.+|+|...++-
T Consensus 88 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~i~~Visn~~-~-----------a-~~~~A~~~gIp~~~~~~ 145 (287)
T 3nrb_A 88 RKKVVIMVSKFDHC-----LGDLLYRHRLGELDMEVVGIISNHP-R-----------E-ALSVSLVGDIPFHYLPV 145 (287)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHHTSSCCEEEEEEESSC-G-----------G-GCCCCCCTTSCEEECCC
T ss_pred CcEEEEEEeCCCcC-----HHHHHHHHHCCCCCeEEEEEEeCCh-H-----------H-HHHHHHHcCCCEEEEec
Confidence 55777888888753 556666654 3455 888888875 1 0 34578899999998864
No 94
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=46.62 E-value=26 Score=31.21 Aligned_cols=58 Identities=24% Similarity=0.182 Sum_probs=38.0
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhh-CCCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCC
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAAL-WKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMD 297 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~-~~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D 297 (361)
+.+++|.+.|.|+..+ +|--+.. -.+| |+.||.|+.=+. -.++|+.+|+|.+.++..+
T Consensus 8 ~~ri~vl~SG~gsnl~-----all~~~~~~~~~~~I~~Vis~~~~a~------------~l~~A~~~gIp~~~~~~~~ 68 (215)
T 3kcq_A 8 ELRVGVLISGRGSNLE-----ALAKAFSTEESSVVISCVISNNAEAR------------GLLIAQSYGIPTFVVKRKP 68 (215)
T ss_dssp CEEEEEEESSCCHHHH-----HHHHHTCCC-CSEEEEEEEESCTTCT------------HHHHHHHTTCCEEECCBTT
T ss_pred CCEEEEEEECCcHHHH-----HHHHHHHcCCCCcEEEEEEeCCcchH------------HHHHHHHcCCCEEEeCccc
Confidence 4578888999988764 3444443 3455 888888764111 1367888999999887543
No 95
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=45.21 E-value=35 Score=30.17 Aligned_cols=56 Identities=25% Similarity=0.171 Sum_probs=37.7
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhhC-CCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~-~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+.+++|.+.|.|+..+. |--+... ++| |+.||.|+.=+. -.++|+.+|+|.+.++.
T Consensus 7 ~~ri~vl~SG~gsnl~a-----ll~~~~~~~l~~~I~~Visn~~~a~------------~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEA-----LIRAAQAPGFPAEIVAVFSDKAEAG------------GLAKAEAAGIATQVFKR 65 (209)
T ss_dssp CEEEEEEESSCCHHHHH-----HHHHHTSTTCSEEEEEEEESCTTCT------------HHHHHHHTTCCEEECCG
T ss_pred CccEEEEEECCcHHHHH-----HHHHHHcCCCCcEEEEEEECCcccH------------HHHHHHHcCCCEEEeCc
Confidence 45788899999887643 4444433 455 788888764111 13678899999999864
No 96
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=43.69 E-value=24 Score=31.44 Aligned_cols=56 Identities=20% Similarity=0.097 Sum_probs=37.3
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhhCCCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+.+++|.+.|.|+..+ +|--+...+++ |+.||.|+.=+ .-.++|+.+|+|.+.++-
T Consensus 5 ~~riavl~SG~Gsnl~-----all~~~~~~~~~eI~~Vis~~~~a------------~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 5 PLPIVVLISGNGTNLQ-----AIIGAIQKGLAIEIRAVISNRADA------------YGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp CEEEEEEESSCCHHHH-----HHHHHHHTTCSEEEEEEEESCTTC------------HHHHHHHHTTCCEEECCG
T ss_pred CcEEEEEEeCCcHHHH-----HHHHHHHcCCCCEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCc
Confidence 4567778889887654 45555554455 88888876411 113678889999999864
No 97
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=41.68 E-value=27 Score=32.63 Aligned_cols=54 Identities=20% Similarity=0.129 Sum_probs=37.3
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhhC-CCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~-~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+.+++|.+.|.|+. .++|--+.+. .+| |..||.|+. . ...+|+.+|+|.+.++-
T Consensus 95 ~~ri~vl~Sg~g~~-----l~~ll~~~~~g~l~~~i~~Visn~~-~-------------~~~~A~~~gIp~~~~~~ 151 (292)
T 3lou_A 95 RPKVLIMVSKLEHC-----LADLLFRWKMGELKMDIVGIVSNHP-D-------------FAPLAAQHGLPFRHFPI 151 (292)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHHTSSCCEEEEEEESSS-T-------------THHHHHHTTCCEEECCC
T ss_pred CCEEEEEEcCCCcC-----HHHHHHHHHcCCCCcEEEEEEeCcH-H-------------HHHHHHHcCCCEEEeCC
Confidence 55778888888753 5666666543 355 888888875 1 23458889999998753
No 98
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=40.72 E-value=25 Score=32.67 Aligned_cols=54 Identities=19% Similarity=0.176 Sum_probs=37.6
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhhhC-CCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~~~-~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+.+++|.+.|.|+. .++|--+.+. .+| |+.||.|+. . ...+|+.+|+|.+.++-
T Consensus 90 ~~ri~vl~Sg~g~~-----l~~ll~~~~~g~l~~~i~~Visn~~-~-------------~~~~A~~~gIp~~~~~~ 146 (286)
T 3n0v_A 90 RPKVVIMVSKADHC-----LNDLLYRQRIGQLGMDVVAVVSNHP-D-------------LEPLAHWHKIPYYHFAL 146 (286)
T ss_dssp CCEEEEEESSCCHH-----HHHHHHHHHTTSSCCEEEEEEESSS-T-------------THHHHHHTTCCEEECCC
T ss_pred CcEEEEEEeCCCCC-----HHHHHHHHHCCCCCcEEEEEEeCcH-H-------------HHHHHHHcCCCEEEeCC
Confidence 55778888888742 5667766544 355 888888875 1 23458889999998753
No 99
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=38.87 E-value=38 Score=29.83 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=36.2
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCC--CeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCC
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 296 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~L--Pvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~ 296 (361)
+++|.+.|.|++... .|......++ .|+.||.|+. . ....++|+.+|+|.+.++..
T Consensus 5 ki~vl~sG~g~~~~~----~l~~l~~~~l~~~I~~Vit~~~-~-----------~~v~~~A~~~gIp~~~~~~~ 62 (212)
T 3av3_A 5 RLAVFASGSGTNFQA----IVDAAKRGDLPARVALLVCDRP-G-----------AKVIERAARENVPAFVFSPK 62 (212)
T ss_dssp EEEEECCSSCHHHHH----HHHHHHTTCCCEEEEEEEESST-T-----------CHHHHHHHHTTCCEEECCGG
T ss_pred EEEEEEECCcHHHHH----HHHHHHhCCCCCeEEEEEeCCC-C-----------cHHHHHHHHcCCCEEEeCcc
Confidence 578888999887543 2333333334 4777777753 1 13567788999999987643
No 100
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=37.97 E-value=29 Score=30.40 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=32.9
Q ss_pred CCceEEEEECCCcccCcchHHHHHHhh-hCCCCeEEEEEc
Q 018048 223 CDHVTLAFFGDGTCNNGQFFECLNMAA-LWKLPIVFVVEN 261 (361)
Q Consensus 223 ~~~~Vv~~~GDGs~~~g~~~eeL~tA~-~~~LPvi~VV~N 261 (361)
.-..+|+++|+=+-....+..|+.+|. ..++|||.|-.+
T Consensus 79 ~Sk~vIllIs~~T~~s~~v~wEIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 79 NSKNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp TEEEEEEECCTTCCCCHHHHHHHHHHTTTTCCCEEEEETT
T ss_pred hcCcEEEEEecCccccchhHHHHHHHHHhcCCcEEEEECC
Confidence 356799999999988666677999999 999999988765
No 101
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=35.31 E-value=63 Score=35.11 Aligned_cols=103 Identities=14% Similarity=0.097 Sum_probs=52.4
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEE--EECCCcccCc--chHHHHH-Hh-hh--CCCCeEEEEEcCCcccccccc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLA--FFGDGTCNNG--QFFECLN-MA-AL--WKLPIVFVVENNLWAIGMSHL 271 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~--~~GDGs~~~g--~~~eeL~-tA-~~--~~LPvi~VV~NN~y~is~~~~ 271 (361)
.+..|.|+|++ +++..+|+ .+|| |.++ ..+.-+- .+ +. +++||++++-. +|.-..+.+
T Consensus 664 ~vg~a~G~A~~-----------G~~~lpv~e~qf~d--F~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~H 729 (933)
T 2jgd_A 664 VLAFEYGYATA-----------EPRTLTIWEAQFGD--FANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEH 729 (933)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEEC-CGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTS
T ss_pred HHHHHHHHHhc-----------CCCCCCEEEEEEhh--hhcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCccc
Confidence 35567777777 55533433 5655 5543 2233332 23 23 48999988875 543222222
Q ss_pred cccCCcchhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEE
Q 018048 272 RATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLV 321 (361)
Q Consensus 272 ~q~~~~d~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lI 321 (361)
.+ ..+..+..-..+|+++| .-.|+.+....++.++. +..++|++|
T Consensus 730 ss---~~~E~~l~~~~~pnm~V~~Pst~~e~~~lLr~a~~--~~~~~Pvii 775 (933)
T 2jgd_A 730 SS---ARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQAL--RGMRRPLVV 775 (933)
T ss_dssp SC---CCHHHHHHTCCTTCCEEECCCSHHHHHHHHHHHHH--SSCCCCEEE
T ss_pred cc---chHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHH--hcCCCcEEE
Confidence 22 11233333344556644 34566676655555421 234799998
No 102
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=35.31 E-value=36 Score=30.28 Aligned_cols=84 Identities=23% Similarity=0.220 Sum_probs=46.4
Q ss_pred CceEEEEECCCcccCcchHHHHHHhhhCCCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCCHHHH
Q 018048 224 DHVTLAFFGDGTCNNGQFFECLNMAALWKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKV 301 (361)
Q Consensus 224 ~~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v 301 (361)
.+++|.+.|-|+.. ++|--+...+++ |+.|+.|+. . ...++|+.+|+|.+.++-.+. .-
T Consensus 13 ~ri~vl~SG~gsnl-----~all~~~~~~~~~eI~~Vis~~~-a------------~~~~~A~~~gIp~~~~~~~~~-~~ 73 (215)
T 3da8_A 13 ARLVVLASGTGSLL-----RSLLDAAVGDYPARVVAVGVDRE-C------------RAAEIAAEASVPVFTVRLADH-PS 73 (215)
T ss_dssp EEEEEEESSCCHHH-----HHHHHHSSTTCSEEEEEEEESSC-C------------HHHHHHHHTTCCEEECCGGGS-SS
T ss_pred cEEEEEEeCChHHH-----HHHHHHHhccCCCeEEEEEeCCc-h------------HHHHHHHHcCCCEEEeCcccc-cc
Confidence 35667777887754 445555433454 777777764 2 125678899999999853210 00
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEEEe
Q 018048 302 REVAKEAIERARRGEGPTLVECETY 326 (361)
Q Consensus 302 ~~al~~Al~~ar~~~gP~lIev~t~ 326 (361)
.++..+++....+.-+|=+|-+.-|
T Consensus 74 r~~~d~~~~~~l~~~~~Dlivlagy 98 (215)
T 3da8_A 74 RDAWDVAITAATAAHEPDLVVSAGF 98 (215)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEC
T ss_pred hhhhhHHHHHHHHhhCCCEEEEcCc
Confidence 1122233333334445666666555
No 103
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=34.12 E-value=67 Score=34.59 Aligned_cols=106 Identities=9% Similarity=0.020 Sum_probs=55.2
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcc--hHHHHHHhh----hCCCCeEEEEEcCCcccccccccc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ--FFECLNMAA----LWKLPIVFVVENNLWAIGMSHLRA 273 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~--~~eeL~tA~----~~~LPvi~VV~NN~y~is~~~~~q 273 (361)
.+..|+|+|++ +++..+|.-.-=|.|.++. .+.-+...+ ..++||++++-.-+++.+ +.+.+
T Consensus 596 ~vG~a~G~A~~-----------G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G~G-p~Hs~ 663 (868)
T 2yic_A 596 AVGFEYGYSVG-----------NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQG-PDHTS 663 (868)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSC
T ss_pred HHHHHHHHHcc-----------CCCCceEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCCCC-hhhcC
Confidence 35667888877 6665555555455566553 122222222 238899988875432322 22222
Q ss_pred cCCcchhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 018048 274 TSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 322 (361)
Q Consensus 274 ~~~~d~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lIe 322 (361)
....++..+ ..+|+++| .-.|+.+....++.++. +..++|++|-
T Consensus 664 ~~~E~~l~l---~~~pnm~V~~Ps~p~~~~~lLr~a~~--~~~~~Pvii~ 708 (868)
T 2yic_A 664 GRIERFLQL---WAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVF 708 (868)
T ss_dssp CCHHHHHHH---CCTTSCEEECCCSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred CcHHHHHhc---CCCCCCEEEEeCCHHHHHHHHHHHHh--cCCCCcEEEE
Confidence 112344433 34566654 34566776666665442 2235898773
No 104
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=33.83 E-value=43 Score=29.54 Aligned_cols=54 Identities=20% Similarity=0.223 Sum_probs=35.7
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhC---CCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALW---KLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~---~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+++|.+.|.|+. +++|.-+... +..|+.||.|+. . +.-.++|+.+|+|.+.++.
T Consensus 2 riaVl~SG~Gs~-----L~aLi~~~~~~~~~~~I~~Vvs~~~-~-----------~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 2 RVAVLISGTGSN-----LQALIDSTREPNSSAQIDIVISNKA-A-----------VAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp EEEEEESSSCTT-----HHHHHHHHHSTTCSCEEEEEEESST-T-----------CHHHHHHHHTTCCEEECCG
T ss_pred eEEEEEECCchH-----HHHHHHHHhcCCCCcEEEEEEeCCC-C-----------hHHHHHHHHcCCCEEEECc
Confidence 567888898864 4455554433 344888888774 1 1124678899999998764
No 105
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=32.01 E-value=74 Score=25.44 Aligned_cols=48 Identities=19% Similarity=0.349 Sum_probs=38.9
Q ss_pred hhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHc--CCCCEEEEEEEe
Q 018048 279 IYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARR--GEGPTLVECETY 326 (361)
Q Consensus 279 ~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~--~~gP~lIev~t~ 326 (361)
+.-+...|++-.+.+...|+.++.+++.+-++.+-. .+.|++|++...
T Consensus 8 ielKG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l 57 (120)
T 3ghf_A 8 IELKGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGL 57 (120)
T ss_dssp CCCCCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEEC
T ss_pred EEEEcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEcccc
Confidence 444667789999999999999999999988887754 467999999643
No 106
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=30.78 E-value=28 Score=30.92 Aligned_cols=54 Identities=17% Similarity=0.297 Sum_probs=36.4
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhC-CCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~-~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+++|.+.|-|+- .++|--+... .+| |+.||.|+. . ....++|+.+|+|.+.++-
T Consensus 4 riavl~Sg~Gsn-----l~ali~~~~~~~l~~eI~~Visn~~-~-----------a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 4 RVAIFASGSGTN-----AEAIIQSQKAGQLPCEVALLITDKP-G-----------AKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp EEEEECCTTCHH-----HHHHHHHHHTTCCSSEEEEEEESCS-S-----------SHHHHHHHTTTCCEEECCG
T ss_pred EEEEEEeCCchH-----HHHHHHHHHcCCCCcEEEEEEECCC-C-----------cHHHHHHHHcCCCEEEeCh
Confidence 566777777643 5566666543 355 888888764 1 1355788899999998764
No 107
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=30.40 E-value=55 Score=28.83 Aligned_cols=56 Identities=11% Similarity=0.126 Sum_probs=35.1
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCC--CeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCC
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 296 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~L--Pvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~ 296 (361)
++++.+.|-|++... .|......++ .|+.||.|+. . ....++|+.+|+|.+.++..
T Consensus 3 rI~vl~SG~g~~~~~----~l~~l~~~~~~~~i~~Vvs~~~-~-----------~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 3 KIGVLVSGRGSNLQA----IIDAIESGKVNASIELVISDNP-K-----------AYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp EEEEEECSCCHHHHH----HHHHHHTTSSCEEEEEEEESCT-T-----------CHHHHHHHHHTCCEEECCGG
T ss_pred EEEEEEeCCcHHHHH----HHHHHHhCCCCCeEEEEEeCCC-C-----------hHHHHHHHHcCCCEEEeCcc
Confidence 456666798876543 2333333345 4777877763 1 12457788899999987654
No 108
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=29.63 E-value=72 Score=25.91 Aligned_cols=42 Identities=26% Similarity=0.305 Sum_probs=34.1
Q ss_pred chhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCE
Q 018048 278 QIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319 (361)
Q Consensus 278 d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~ 319 (361)
.|.-+..+-|.-.++..|.|.+++..++++-+..+|+..|.+
T Consensus 74 ~y~imgsgsgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 74 QYQIMGSGSGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp EEEEECTTCCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEeCCceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 344455667788888999999999999999999999887754
No 109
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=29.19 E-value=1.3e+02 Score=24.90 Aligned_cols=78 Identities=12% Similarity=0.131 Sum_probs=42.2
Q ss_pred CceEEEEECCCcccCcc--hHHHHHHhhhCCCCeEEEEEcCCcccccccccccCCcchhhccccCCccE-EEEeCCCHHH
Q 018048 224 DHVTLAFFGDGTCNNGQ--FFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPG-FHVDGMDVLK 300 (361)
Q Consensus 224 ~~~Vv~~~GDGs~~~g~--~~eeL~tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~-~~Vdg~D~~~ 300 (361)
.+.+|+++.||..+.+. ..+.+..+...+++|..|-.-+... .......+..+|..-|-.+ +.++..+ +
T Consensus 110 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~------~~~~~~~L~~iA~~~~g~~~~~~~~~~--~ 181 (198)
T 1n3y_A 110 AAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQ------NRNSWKELNDIASKPSQEHIFKVEDFD--A 181 (198)
T ss_dssp SEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGG------SSTTHHHHHHHSCSSSGGGEEEESSGG--G
T ss_pred CceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEcccccc------ccccHHHHHHHHcCCCcccEEEeCCHH--H
Confidence 45788899999887432 2556777777888766554322210 0001134566666555444 6675433 4
Q ss_pred HHHHHHHHH
Q 018048 301 VREVAKEAI 309 (361)
Q Consensus 301 v~~al~~Al 309 (361)
+...+++..
T Consensus 182 l~~~~~~i~ 190 (198)
T 1n3y_A 182 LKDIQNQLK 190 (198)
T ss_dssp GGGGHHHHH
T ss_pred HHHHHHHHH
Confidence 433444333
No 110
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=27.33 E-value=91 Score=34.53 Aligned_cols=106 Identities=10% Similarity=0.012 Sum_probs=56.5
Q ss_pred ccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcc---hHHHHHHh---hhCCCCeEEEEEcCCcccccccccc
Q 018048 200 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMA---ALWKLPIVFVVENNLWAIGMSHLRA 273 (361)
Q Consensus 200 ~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~---~~eeL~tA---~~~~LPvi~VV~NN~y~is~~~~~q 273 (361)
.+..|+|+|++ +++..++.-.-=|.|.++. +-|=++.+ ...++||++.+-.-+++.+ +.+.+
T Consensus 841 ~vg~a~G~A~~-----------G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G~G-~~Hs~ 908 (1113)
T 2xt6_A 841 AVGFEYGYSVG-----------NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQG-PDHTS 908 (1113)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSC
T ss_pred HHHHHHHHHhc-----------CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCCCC-hhhhc
Confidence 45667788877 6666665554455576654 22222222 1238999988885432322 22222
Q ss_pred cCCcchhhccccCCccEEEE-eCCCHHHHHHHHHHHHHHHHcCCCCEEEE
Q 018048 274 TSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 322 (361)
Q Consensus 274 ~~~~d~~~~A~a~Gi~~~~V-dg~D~~~v~~al~~Al~~ar~~~gP~lIe 322 (361)
....+|..+ ..+|+++| .-.++.+....++.++. +..++|++|-
T Consensus 909 ~~~E~~l~l---~~~pnm~V~~Ps~~~~~~~lLr~a~~--~~~~~Pvii~ 953 (1113)
T 2xt6_A 909 GRIERFLQL---WAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVF 953 (1113)
T ss_dssp CCHHHHHHH---CCTTSCEEECCSSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred ccHHHHHhc---CCCCCcEEEecCCHHHHHHHHHHHHh--ccCCCCEEEE
Confidence 222334433 34566654 34567777666665542 2235898873
No 111
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=26.90 E-value=43 Score=29.58 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=35.6
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhC-CCC--eEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~-~LP--vi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
+++|.+.|.|+. .++|--+... .++ |+.||.|+. . ....++|+.+|+|.+.++.
T Consensus 2 ri~vl~Sg~gsn-----l~ali~~~~~~~~~~~i~~Vis~~~-~-----------~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 2 NIVVLISGNGSN-----LQAIIDACKTNKIKGTVRAVFSNKA-D-----------AFGLERARQAGIATHTLIA 58 (212)
T ss_dssp EEEEEESSCCHH-----HHHHHHHHHTTSSSSEEEEEEESCT-T-----------CHHHHHHHHTTCEEEECCG
T ss_pred EEEEEEECCcHH-----HHHHHHHHHcCCCCceEEEEEeCCC-c-----------hHHHHHHHHcCCcEEEeCc
Confidence 567888888863 4555555433 333 778887763 1 1235678899999998764
No 112
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=24.69 E-value=93 Score=27.73 Aligned_cols=56 Identities=16% Similarity=0.264 Sum_probs=33.6
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCC--CeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCC
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 296 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~L--Pvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~ 296 (361)
+++|.+.|-|++... .|......++ .|+.||.|+. .....++|+.+|+|.+.++..
T Consensus 24 rI~~l~SG~g~~~~~----~l~~l~~~~~~~~I~~Vvt~~~------------~~~~~~~A~~~gIp~~~~~~~ 81 (229)
T 3auf_A 24 RIGVLISGSGTNLQA----ILDGCREGRIPGRVAVVISDRA------------DAYGLERARRAGVDALHMDPA 81 (229)
T ss_dssp EEEEEESSCCHHHHH----HHHHHHTTSSSEEEEEEEESST------------TCHHHHHHHHTTCEEEECCGG
T ss_pred EEEEEEeCCcHHHHH----HHHHHHhCCCCCeEEEEEcCCC------------chHHHHHHHHcCCCEEEECcc
Confidence 455555688876533 2333333333 4777777653 112356788999999987643
No 113
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=24.36 E-value=1.6e+02 Score=23.51 Aligned_cols=64 Identities=14% Similarity=0.112 Sum_probs=36.8
Q ss_pred hCCCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcCCC
Q 018048 250 LWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEG 317 (361)
Q Consensus 250 ~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~g 317 (361)
..+.|+++|+. .. ......+....+..++++.+|++++.+...+-..+.+.+...++.+.+.++
T Consensus 109 ~~~~p~ilv~n--K~--Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~v~~l~~~l~~~~~~~~~ 172 (181)
T 3t5g_A 109 KVQIPIMLVGN--KK--DLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKMDG 172 (181)
T ss_dssp ---CCEEEEEE--CT--TCTTTCCSCHHHHHHHHHHTTCEEEECCTTSHHHHHHHHHHHHHHHHTC--
T ss_pred CCCCCEEEEEE--Cc--cchhcceecHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHHHHhcC
Confidence 34778776653 21 111222222345666778889999999887766776667776666655443
No 114
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=23.67 E-value=1.8e+02 Score=26.59 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=27.9
Q ss_pred EEEECCCccc--CcchHHHHHHhhhCCCCeEEEEEcC
Q 018048 228 LAFFGDGTCN--NGQFFECLNMAALWKLPIVFVVENN 262 (361)
Q Consensus 228 v~~~GDGs~~--~g~~~eeL~tA~~~~LPvi~VV~NN 262 (361)
|+|--||+.. +|++.-+|..|..+. .|.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 5666788777 889999999999998 888888653
No 115
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=23.16 E-value=76 Score=32.04 Aligned_cols=71 Identities=10% Similarity=0.115 Sum_probs=42.9
Q ss_pred cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCcccCcchHHHHH-Hhh--------hCCCCeEEEEEc
Q 018048 191 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLN-MAA--------LWKLPIVFVVEN 261 (361)
Q Consensus 191 ~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~~g~~~eeL~-tA~--------~~~LPvi~VV~N 261 (361)
..-+..+|.++..+.|.++..-+.... ..+-++|.+.-=|+..+..-...|. ++. .-.+|.|-||.+
T Consensus 97 a~D~t~~gGS~g~~~~~Ki~ra~e~A~----~~~~P~I~l~~SGGaRmqeg~~sl~~~~~i~~~~~~~s~~iP~Isvv~g 172 (522)
T 1x0u_A 97 AQDFTVLGGSLGETHANKIVRAYELAL----KVGAPVVGINDSGGARIQEGALSLEGYGAVFKMNVMASGVIPQITIMAG 172 (522)
T ss_dssp EECTTTGGGCBCHHHHHHHHHHHHHHH----HHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHHHHHHTTTSCEEEEECS
T ss_pred EecCceeCccccHHHHHHHHHHHHHHH----HcCCCEEEEEcCCCCChhHHHHHHHHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 356788999999999998875443211 1345566666555554322133322 221 124999999988
Q ss_pred CCcc
Q 018048 262 NLWA 265 (361)
Q Consensus 262 N~y~ 265 (361)
...+
T Consensus 173 p~~G 176 (522)
T 1x0u_A 173 PAAG 176 (522)
T ss_dssp EEEG
T ss_pred CCch
Confidence 8654
No 116
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=22.98 E-value=1.1e+02 Score=24.92 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=27.5
Q ss_pred CccEEEEeCCCHHHHHHHHHHHHHHHHcCCCCE
Q 018048 287 GMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 319 (361)
Q Consensus 287 Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~~gP~ 319 (361)
|.-.++..|.|.+++..++++-+..+|+..|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 556678889999999999999999999887654
No 117
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=22.73 E-value=87 Score=31.62 Aligned_cols=69 Identities=12% Similarity=0.214 Sum_probs=40.8
Q ss_pred cCCccccccccHHHHHHHHHHHHHHhhhhhcCCCceEEEEECCCccc--CcchHHHHH-Hhh--------hCCCCeEEEE
Q 018048 191 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCN--NGQFFECLN-MAA--------LWKLPIVFVV 259 (361)
Q Consensus 191 ~~~~g~mG~~lP~AiGaA~A~k~~~~~~~~~~~~~~Vv~~~GDGs~~--~g~~~eeL~-tA~--------~~~LPvi~VV 259 (361)
..-+..+|.++..+.|.++..-+.... ..+-++|.+.-=|+.. +| ...|. ++. .-.+|.|-||
T Consensus 101 a~D~t~~gGS~g~~~~~Ki~ra~e~A~----~~~lP~I~l~~SGGARmqeg--~~sl~~~~~i~~~~~~~s~~iP~Isvv 174 (523)
T 1on3_A 101 SQDFTVMGGSAGETQSTKVVETMEQAL----LTGTPFLFFYDSGGARIQEG--IDSLSGYGKMFFANVKLSGVVPQIAII 174 (523)
T ss_dssp EECTTTGGGCBCHHHHHHHHHHHHHHH----HHTCCEEEEEEECSBCGGGT--HHHHHHHHHHHHHHHHHTTTSCEEEEE
T ss_pred EEcCCccCCcCcHHHHHHHHHHHHHHH----HcCCCEEEEEcCCCCChhhH--HHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 356789999999999998875443211 1234455444333333 55 33322 211 1249999999
Q ss_pred EcCCcc
Q 018048 260 ENNLWA 265 (361)
Q Consensus 260 ~NN~y~ 265 (361)
.+..++
T Consensus 175 ~gp~~G 180 (523)
T 1on3_A 175 AGPCAG 180 (523)
T ss_dssp EEEEES
T ss_pred cCCCch
Confidence 988654
No 118
>1hi9_A Dciaa, dipeptide transport protein DPPA; hydrolase (protease), protease, D-aminopeptidase, decamer, SELF-compartmentalizing; 2.4A {Bacillus subtilis} SCOP: c.99.1.1
Probab=22.47 E-value=58 Score=30.14 Aligned_cols=75 Identities=12% Similarity=0.104 Sum_probs=36.7
Q ss_pred HhhhCCCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeCCCHHHHHHHHHHHHHHHHcC---------CC
Q 018048 247 MAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRG---------EG 317 (361)
Q Consensus 247 tA~~~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg~D~~~v~~al~~Al~~ar~~---------~g 317 (361)
+|..++.||++|--+.... .. .+...+...+...=+++|-. ......+..+.+.++++.+++.+. ++
T Consensus 140 ~Ag~~gVPV~lvsGDd~~~-~e-~~~~~P~~~tv~vK~~~gr~--aa~~~~p~~a~~~I~~aa~~Al~~~~~~~p~~~~~ 215 (274)
T 1hi9_A 140 VAGYYDVPVLMVAGDDRAA-KE-AEELIPNVTTAAVKQTISRS--AVKCLSPAKRGRLLTEKTAFALQNKDKVKPLTPPD 215 (274)
T ss_dssp HHHHTTCCEEEEEEEHHHH-HH-HHTTSTTCEEEEEEEEEETT--EEEECCHHHHHHHHHHHHHHHHHSGGGCCCCCCCS
T ss_pred HHhhcCCCEEEEecCHHHH-HH-HHHhCCCCeEEEEeeccccc--ccccCCHHHHHHHHHHHHHHHHhhccCCCCcCCCC
Confidence 4567777777777666421 11 11111112222222233311 122345556666777766666532 46
Q ss_pred CEEEEEEE
Q 018048 318 PTLVECET 325 (361)
Q Consensus 318 P~lIev~t 325 (361)
|.-+|+..
T Consensus 216 p~~l~v~f 223 (274)
T 1hi9_A 216 RPVLSIEF 223 (274)
T ss_dssp SCEEEEEE
T ss_pred CEEEEEEE
Confidence 77777754
No 119
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.30 E-value=81 Score=27.03 Aligned_cols=35 Identities=3% Similarity=-0.101 Sum_probs=20.8
Q ss_pred ceEEEEECCCcccCcchHHHHHHhhhCCCCeEEEE
Q 018048 225 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVV 259 (361)
Q Consensus 225 ~~Vv~~~GDGs~~~g~~~eeL~tA~~~~LPvi~VV 259 (361)
++++.++||+....+...+....+...++.|.+|-
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig 142 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIH 142 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEE
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEE
Confidence 33555566664334444556666677888866663
No 120
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=21.48 E-value=2e+02 Score=23.36 Aligned_cols=88 Identities=19% Similarity=0.230 Sum_probs=44.2
Q ss_pred CCCceEEEEECCCcccCcchHHHHHHhhh------CCCCeEEEEEcCCcccccccccccCCcchhhccccCCccEEEEeC
Q 018048 222 DCDHVTLAFFGDGTCNNGQFFECLNMAAL------WKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 295 (361)
Q Consensus 222 ~~~~~Vv~~~GDGs~~~g~~~eeL~tA~~------~~LPvi~VV~NN~y~is~~~~~q~~~~d~~~~A~a~Gi~~~~Vdg 295 (361)
..+..++++--+-.-+.....+-+..... .+.|+++|.. ..-+ ....+....+..++++.+|++++.+..
T Consensus 91 ~~~~~ilv~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~n--K~Dl--~~~~~v~~~~~~~~~~~~~~~~~e~Sa 166 (187)
T 3c5c_A 91 WAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGN--KLDM--AQYRQVTKAEGVALAGRFGCLFFEVSA 166 (187)
T ss_dssp TCSEEEEEEETTCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE--CGGG--GGGCSSCHHHHHHHHHHHTCEEEECCS
T ss_pred hCCEEEEEEECCCHHHHHHHHHHHHHHHHHhhccCCCCCEEEEEE--Ccch--hhcCccCHHHHHHHHHHcCCcEEEEee
Confidence 35666777766532221111112222222 4788765553 2111 111222223455677778999998887
Q ss_pred -CCHHHHHHHHHHHHHHHH
Q 018048 296 -MDVLKVREVAKEAIERAR 313 (361)
Q Consensus 296 -~D~~~v~~al~~Al~~ar 313 (361)
.+-..+.+.+...++.++
T Consensus 167 ~~~g~gv~~lf~~l~~~i~ 185 (187)
T 3c5c_A 167 CLDFEHVQHVFHEAVREAR 185 (187)
T ss_dssp SSCSHHHHHHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHh
Confidence 554555555555555543
Done!